Your job contains 1 sequence.
>040159
MDGEGAGHQPGLQFSPLLIGLLGVIAGFMMVATYHCISLGCCCCNNNQQAQDNEPNTRQD
TERNYDHRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPEC
LHLFHVPCIDMWLSSHSNCPLCRANANAAPPPHLVLTLPDSGGAPQPEFHRAPDYG
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040159
(176 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:4515103413 - symbol:ATL4H species:3702 "Arabid... 194 1.4e-19 2
TAIR|locus:2151421 - symbol:AT5G17600 species:3702 "Arabi... 232 2.7e-19 1
TAIR|locus:2096444 - symbol:AT3G03550 species:3702 "Arabi... 227 9.4e-19 1
UNIPROTKB|Q7XLY8 - symbol:LOC_Os04g50100 "E3 ubiquitin-pr... 219 1.2e-17 1
TAIR|locus:2057861 - symbol:AT2G27940 species:3702 "Arabi... 210 4.1e-17 1
TAIR|locus:2085914 - symbol:AT3G18930 species:3702 "Arabi... 182 4.8e-17 2
TAIR|locus:2142449 - symbol:RING1 species:3702 "Arabidops... 199 6.0e-16 1
TAIR|locus:2089398 - symbol:ATL2 "TOXICOS EN LEVADURA 2" ... 197 1.1e-15 1
TAIR|locus:2062008 - symbol:AT2G47560 species:3702 "Arabi... 195 1.6e-15 1
TAIR|locus:2018334 - symbol:AT1G04360 species:3702 "Arabi... 197 3.3e-15 1
TAIR|locus:2053791 - symbol:AT2G42360 species:3702 "Arabi... 164 7.2e-15 2
UNIPROTKB|Q9LRB7 - symbol:EL5.1 "E3 ubiquitin-protein lig... 189 1.4e-14 1
TAIR|locus:2153554 - symbol:DAF "DEFECTIVE IN ANTHER DEHI... 186 1.4e-14 1
TAIR|locus:2207066 - symbol:AT1G72220 species:3702 "Arabi... 192 1.5e-14 1
TAIR|locus:2081740 - symbol:ATL5 "AtL5" species:3702 "Ara... 185 1.8e-14 1
TAIR|locus:2125364 - symbol:AT4G35840 species:3702 "Arabi... 185 1.8e-14 1
TAIR|locus:2103162 - symbol:DAFL1 "DAF-Like gene 1" speci... 183 3.0e-14 1
TAIR|locus:2081907 - symbol:ATL4 "TOXICOS EN LEVADURA 4" ... 186 3.5e-14 1
TAIR|locus:2124695 - symbol:AT4G10150 species:3702 "Arabi... 181 4.9e-14 1
TAIR|locus:2124700 - symbol:AT4G10160 species:3702 "Arabi... 181 4.9e-14 1
TAIR|locus:2181032 - symbol:DAFL2 "DAF-Like gene 2" speci... 181 4.9e-14 1
TAIR|locus:2007008 - symbol:AT1G33480 species:3702 "Arabi... 180 6.2e-14 1
TAIR|locus:505006547 - symbol:AT4G33565 species:3702 "Ara... 185 6.4e-14 1
TAIR|locus:2156867 - symbol:AT5G66070 species:3702 "Arabi... 179 7.9e-14 1
TAIR|locus:2140069 - symbol:AT4G40070 species:3702 "Arabi... 182 8.7e-14 1
TAIR|locus:505006488 - symbol:AT4G17245 species:3702 "Ara... 176 1.6e-13 1
TAIR|locus:2197026 - symbol:AT1G53820 species:3702 "Arabi... 178 2.1e-13 1
TAIR|locus:2090980 - symbol:AT3G14320 species:3702 "Arabi... 175 2.1e-13 1
TAIR|locus:2176436 - symbol:AT5G43420 species:3702 "Arabi... 180 2.4e-13 1
TAIR|locus:2193992 - symbol:ATL3 species:3702 "Arabidopsi... 178 2.5e-13 1
TAIR|locus:2011686 - symbol:ATL8 species:3702 "Arabidopsi... 174 2.7e-13 1
TAIR|locus:2825708 - symbol:AT1G20823 species:3702 "Arabi... 174 2.7e-13 1
TAIR|locus:2117622 - symbol:RHA3B "RING-H2 finger A3B" sp... 172 4.4e-13 1
TAIR|locus:1009023242 - symbol:AT3G60966 "AT3G60966" spec... 172 4.4e-13 1
UNIPROTKB|Q8H7N9 - symbol:LOC_Os03g08920 "E3 ubiquitin-pr... 177 4.4e-13 1
TAIR|locus:2061698 - symbol:AT2G20030 species:3702 "Arabi... 178 4.5e-13 1
TAIR|locus:2141005 - symbol:AT4G17920 species:3702 "Arabi... 173 5.6e-13 1
TAIR|locus:2074678 - symbol:AT3G11110 species:3702 "Arabi... 171 5.6e-13 1
UNIPROTKB|I3L0L6 - symbol:RNF167 "E3 ubiquitin-protein li... 158 6.8e-13 2
TAIR|locus:2053863 - symbol:RHA3A "RING-H2 finger A3A" sp... 170 7.1e-13 1
TAIR|locus:2044757 - symbol:ATL9 "Arabidopsis toxicos en ... 175 8.8e-13 1
TAIR|locus:2122363 - symbol:AT4G09120 species:3702 "Arabi... 173 1.1e-12 1
TAIR|locus:2062892 - symbol:AT2G46160 species:3702 "Arabi... 168 1.2e-12 1
UNIPROTKB|Q9H6Y7 - symbol:RNF167 "E3 ubiquitin-protein li... 158 1.2e-12 2
TAIR|locus:2178788 - symbol:ATL63 "TOXICOS EN LEVADURA 63... 171 1.3e-12 1
TAIR|locus:2207026 - symbol:AT1G72200 species:3702 "Arabi... 174 1.4e-12 1
TAIR|locus:2169399 - symbol:AT5G07040 species:3702 "Arabi... 167 1.5e-12 1
TAIR|locus:2830088 - symbol:AT3G18773 species:3702 "Arabi... 167 1.5e-12 1
TAIR|locus:2128303 - symbol:RHA1A "RING-H2 finger A1A" sp... 167 1.5e-12 1
TAIR|locus:2054049 - symbol:MEE16 "maternal effect embryo... 174 1.5e-12 1
TAIR|locus:2123558 - symbol:AT4G28890 species:3702 "Arabi... 174 1.6e-12 1
TAIR|locus:2199902 - symbol:AT1G23980 species:3702 "Arabi... 172 1.8e-12 1
UNIPROTKB|E2R9W3 - symbol:RNF43 "Uncharacterized protein"... 161 1.8e-12 2
TAIR|locus:2122348 - symbol:AT4G09100 species:3702 "Arabi... 166 1.9e-12 1
TAIR|locus:2028411 - symbol:AT1G49200 species:3702 "Arabi... 166 1.9e-12 1
TAIR|locus:2028506 - symbol:AT1G49220 species:3702 "Arabi... 166 1.9e-12 1
TAIR|locus:2028436 - symbol:AT1G49230 species:3702 "Arabi... 166 1.9e-12 1
TAIR|locus:2044742 - symbol:AT2G34990 species:3702 "Arabi... 169 2.0e-12 1
UNIPROTKB|F1P2A5 - symbol:RNF111 "Uncharacterized protein... 159 2.0e-12 2
UNIPROTKB|J9P4S5 - symbol:RNF43 "Uncharacterized protein"... 161 2.1e-12 2
UNIPROTKB|E2R7H1 - symbol:RNF111 "Uncharacterized protein... 159 2.1e-12 2
UNIPROTKB|F1S053 - symbol:RNF111 "Uncharacterized protein... 159 2.1e-12 2
UNIPROTKB|Q5Z5F2 - symbol:LOC_Os06g34450 "E3 ubiquitin-pr... 165 2.4e-12 1
TAIR|locus:2053776 - symbol:AT2G42350 species:3702 "Arabi... 165 2.4e-12 1
TAIR|locus:2118651 - symbol:AT4G30370 species:3702 "Arabi... 165 2.4e-12 1
TAIR|locus:2118666 - symbol:AT4G30400 species:3702 "Arabi... 173 2.4e-12 1
TAIR|locus:2009527 - symbol:ATL15 "Arabidopsis toxicos en... 171 2.5e-12 1
UNIPROTKB|E1BSQ8 - symbol:RNF111 "Uncharacterized protein... 159 2.6e-12 2
TAIR|locus:2206722 - symbol:AT1G35330 species:3702 "Arabi... 169 2.6e-12 1
TAIR|locus:2028406 - symbol:AT1G49210 species:3702 "Arabi... 164 3.1e-12 1
TAIR|locus:2122358 - symbol:AT4G09110 species:3702 "Arabi... 167 3.3e-12 1
TAIR|locus:4010713708 - symbol:AT2G44578 "AT2G44578" spec... 163 3.9e-12 1
TAIR|locus:2178515 - symbol:AT5G46650 species:3702 "Arabi... 165 4.7e-12 1
TAIR|locus:2146330 - symbol:CNI1 "carbon/nitrogen insensi... 168 4.9e-12 1
TAIR|locus:2082762 - symbol:AT3G61550 species:3702 "Arabi... 162 5.0e-12 1
TAIR|locus:2144088 - symbol:AT5G06490 species:3702 "Arabi... 162 5.0e-12 1
UNIPROTKB|A6QLE0 - symbol:RNF111 "Uncharacterized protein... 159 5.6e-12 2
TAIR|locus:2034210 - symbol:AT1G80400 species:3702 "Arabi... 141 6.2e-12 2
TAIR|locus:2172550 - symbol:AT5G57750 species:3702 "Arabi... 161 6.4e-12 1
TAIR|locus:2096309 - symbol:ATL6 "Arabidopsis toxicos en ... 167 7.6e-12 1
TAIR|locus:2040085 - symbol:AT2G25410 species:3702 "Arabi... 166 8.6e-12 1
TAIR|locus:2128293 - symbol:RHA1B "RING-H2 finger A1B" sp... 159 1.0e-11 1
TAIR|locus:2169063 - symbol:AT5G47610 species:3702 "Arabi... 159 1.0e-11 1
TAIR|locus:2122378 - symbol:AT4G09130 species:3702 "Arabi... 164 1.2e-11 1
UNIPROTKB|C9IY58 - symbol:RNF13 "E3 ubiquitin-protein lig... 158 1.3e-11 1
UNIPROTKB|C9JCY0 - symbol:RNF13 "E3 ubiquitin-protein lig... 158 1.3e-11 1
UNIPROTKB|K7GLM9 - symbol:LOC100519887 "Uncharacterized p... 158 1.3e-11 1
TAIR|locus:2053994 - symbol:AT2G18670 species:3702 "Arabi... 158 1.3e-11 1
ZFIN|ZDB-GENE-040426-772 - symbol:rnf13 "ring finger prot... 164 1.4e-11 1
UNIPROTKB|Q5R476 - symbol:RNF111 "E3 ubiquitin-protein li... 159 1.8e-11 2
RGD|1310097 - symbol:Rnf111 "ring finger protein 111" spe... 159 1.8e-11 2
UNIPROTKB|Q6ZNA4 - symbol:RNF111 "E3 ubiquitin-protein li... 159 1.8e-11 2
UNIPROTKB|B3KR12 - symbol:RNF13 "cDNA FLJ33452 fis, clone... 158 1.9e-11 1
TAIR|locus:2097890 - symbol:AT3G48030 "AT3G48030" species... 162 1.9e-11 1
UNIPROTKB|B4DYE0 - symbol:RNF44 "cDNA FLJ61466, highly si... 162 2.0e-11 1
TAIR|locus:2039170 - symbol:AT2G35910 species:3702 "Arabi... 156 2.2e-11 1
TAIR|locus:4515102621 - symbol:ATL1F species:3702 "Arabid... 161 2.2e-11 1
UNIPROTKB|F1NUJ3 - symbol:RNF13 "E3 ubiquitin-protein lig... 158 2.3e-11 1
UNIPROTKB|F1S5Q0 - symbol:LOC100519887 "Uncharacterized p... 158 2.3e-11 1
RGD|1307212 - symbol:Rnf44 "ring finger protein 44" speci... 161 2.5e-11 1
WARNING: Descriptions of 462 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:4515103413 [details] [associations]
symbol:ATL4H species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
EMBL:AL161547 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL021889 eggNOG:COG5540 HOGENOM:HOG000239376 IPI:IPI00537985
PIR:T05077 RefSeq:NP_001119003.1 UniGene:At.74353
ProteinModelPortal:P0C041 SMR:P0C041 EnsemblPlants:AT4G17905.1
GeneID:6241286 KEGG:ath:AT4G17905 TAIR:At4g17905 PhylomeDB:P0C041
Genevestigator:P0C041 Uniprot:P0C041
Length = 310
Score = 194 (73.4 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 34/65 (52%), Positives = 42/65 (64%)
Query: 97 NEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANA---NAAPPPH 153
N C++CLG+F E E +R+LP+C H FHV CID WL SHSNCPLCRA P H
Sbjct: 151 NGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRAKIIVPTTQQPEH 210
Query: 154 LVLTL 158
V+ +
Sbjct: 211 HVVVM 215
Score = 56 (24.8 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 4 EGAGHQPGLQFSPLLIGLLGVIA-GFMMVATYHCIS 38
+G P L SPL+I + G+ A F++ A Y +S
Sbjct: 50 DGVASNPNL--SPLVIAIFGIFATAFLLAAYYTLVS 83
>TAIR|locus:2151421 [details] [associations]
symbol:AT5G17600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000239376 ProtClustDB:CLSN2686341 EMBL:AL391151
EMBL:AK226188 IPI:IPI00533562 PIR:T51464 RefSeq:NP_197262.1
UniGene:At.28195 ProteinModelPortal:Q9LF64 SMR:Q9LF64
EnsemblPlants:AT5G17600.1 GeneID:831626 KEGG:ath:AT5G17600
TAIR:At5g17600 InParanoid:Q9LF64 OMA:TEANQRS PhylomeDB:Q9LF64
Genevestigator:Q9LF64 GermOnline:AT5G17600 Uniprot:Q9LF64
Length = 362
Score = 232 (86.7 bits), Expect = 2.7e-19, P = 2.7e-19
Identities = 47/133 (35%), Positives = 72/133 (54%)
Query: 14 FSPLLIGLLGVIAGFMMVATYHCISLGXXXXXXXXXXXXXEPNTRQDTERNYDHRQEWPR 73
FSPLLI L+G++ +++ +Y+ + + N + E + Q
Sbjct: 54 FSPLLIALIGILTSALILVSYYTL-ISKYCHRHHQTSSSETLNLNHNGEGFFSSTQRIST 112
Query: 74 DRIRTSSVMRVLMPVFRFSSKDCNED--TCAVCLGDFKEGEQVRVLPECLHLFHVPCIDM 131
+ + M + V+++ S D D C+VCL +F+E E +R+LP+C H FH+PCID
Sbjct: 113 NGDGLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDT 172
Query: 132 WLSSHSNCPLCRA 144
WL SHSNCPLCRA
Sbjct: 173 WLKSHSNCPLCRA 185
>TAIR|locus:2096444 [details] [associations]
symbol:AT3G03550 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0080167 "response to karrikin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0080167
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
EMBL:AC009327 EMBL:AC009895 EMBL:BT006433 EMBL:AY085462
IPI:IPI00548868 RefSeq:NP_566208.1 UniGene:At.44888
ProteinModelPortal:Q9SRQ8 SMR:Q9SRQ8 PRIDE:Q9SRQ8
EnsemblPlants:AT3G03550.1 GeneID:821237 KEGG:ath:AT3G03550
TAIR:At3g03550 HOGENOM:HOG000239376 InParanoid:Q9SRQ8 OMA:YCHRRRH
PhylomeDB:Q9SRQ8 ProtClustDB:CLSN2686341 Genevestigator:Q9SRQ8
GermOnline:AT3G03550 Uniprot:Q9SRQ8
Length = 356
Score = 227 (85.0 bits), Expect = 9.4e-19, P = 9.4e-19
Identities = 54/148 (36%), Positives = 75/148 (50%)
Query: 14 FSPLLIGLLGVIAG-FMMVATYHCISL-------GXXXXXXXXXXXXXEPNTRQDTERNY 65
FSPLLI L+G++A F++V+ Y IS T Q T N
Sbjct: 56 FSPLLIALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNN 115
Query: 66 DHRQEWPRDRIR-------TSSVMRVLMPVFRFSSKD--CNEDTCAVCLGDFKEGEQVRV 116
++ P I S+++ + V+++ D C+VCL +F+E E +R+
Sbjct: 116 NNGATNPNQTIGGGGGDGLDESLIKSIT-VYKYRKMDGFVESSDCSVCLSEFQENESLRL 174
Query: 117 LPECLHLFHVPCIDMWLSSHSNCPLCRA 144
LP+C H FHVPCID WL SHSNCPLCRA
Sbjct: 175 LPKCNHAFHVPCIDTWLKSHSNCPLCRA 202
>UNIPROTKB|Q7XLY8 [details] [associations]
symbol:LOC_Os04g50100 "E3 ubiquitin-protein ligase
Os04g0590900" species:39947 "Oryza sativa Japonica Group"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GO:GO:0004842 EMBL:AP008210 EMBL:CM000141 EMBL:AL662981
EMBL:AK066752 RefSeq:NP_001053709.1 UniGene:Os.16906
UniGene:Os.52382 ProteinModelPortal:Q7XLY8 PRIDE:Q7XLY8
EnsemblPlants:LOC_Os04g50100.1 GeneID:4336823 KEGG:osa:4336823
Gramene:Q7XLY8 eggNOG:NOG264050 OMA:SHAFHQQ ProtClustDB:CLSN2693089
Uniprot:Q7XLY8
Length = 383
Score = 219 (82.2 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 53/158 (33%), Positives = 75/158 (47%)
Query: 3 GEGAGHQPGLQFSPLLIGLLGVIAG-FMMVATYHCIS--LGXXXXXXXXXXXXXEPNTRQ 59
G A G FSPL+I ++GV+A F++V+ Y IS G
Sbjct: 44 GTSADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAY 103
Query: 60 D----TERNYDHRQE-----W---PRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGD 107
+ + H Q W P + + + ++ + +R + C+VCLG+
Sbjct: 104 GGGAGSGGRHGHGQSRSHESWNVSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGE 163
Query: 108 FKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
F +GE +R+LP C H FH CID WL SHSNCPLCRAN
Sbjct: 164 FSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRAN 201
>TAIR|locus:2057861 [details] [associations]
symbol:AT2G27940 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC006929
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AK118539
EMBL:BT005256 IPI:IPI00522216 PIR:G84678 RefSeq:NP_180361.1
UniGene:At.38697 ProteinModelPortal:Q9SJJ7 SMR:Q9SJJ7 IntAct:Q9SJJ7
EnsemblPlants:AT2G27940.1 GeneID:817338 KEGG:ath:AT2G27940
TAIR:At2g27940 eggNOG:NOG262125 HOGENOM:HOG000034166
InParanoid:Q9SJJ7 OMA:TVKVIPH PhylomeDB:Q9SJJ7
ProtClustDB:CLSN2683534 Genevestigator:Q9SJJ7 GermOnline:AT2G27940
Uniprot:Q9SJJ7
Length = 237
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 38/69 (55%), Positives = 51/69 (73%)
Query: 79 SSVMRVLMPVFRFS--SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSH 136
S +R L PV+R++ +K NED C +CL DF+EGE V+V+P C H+FHV C+D WLSS+
Sbjct: 118 SQAVRSL-PVYRYTKAAKQRNED-CVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSY 175
Query: 137 SNCPLCRAN 145
CPLCR+N
Sbjct: 176 VTCPLCRSN 184
>TAIR|locus:2085914 [details] [associations]
symbol:AT3G18930 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009693 "ethylene biosynthetic process"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AP000735
EMBL:AY090932 EMBL:AY122920 EMBL:AY136452 EMBL:BT008506
EMBL:AK175597 EMBL:AK176482 IPI:IPI00518498 RefSeq:NP_188523.1
RefSeq:NP_974336.1 UniGene:At.38477 UniGene:At.63560
ProteinModelPortal:Q67YI6 SMR:Q67YI6 PaxDb:Q67YI6 PRIDE:Q67YI6
EnsemblPlants:AT3G18930.1 EnsemblPlants:AT3G18930.2 GeneID:821425
KEGG:ath:AT3G18930 TAIR:At3g18930 eggNOG:NOG315766
HOGENOM:HOG000034171 InParanoid:Q67YI6 OMA:TYSRLIS PhylomeDB:Q67YI6
ProtClustDB:CLSN2684543 Genevestigator:Q67YI6 GermOnline:AT3G18930
Uniprot:Q67YI6
Length = 411
Score = 182 (69.1 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 88 VFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
V + S+ +C + CAVCL +F+EG+ VR LP C H FH+ CID WL SH NCPLCR
Sbjct: 145 VGKTSAANCRD--CAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCR 198
Score = 54 (24.1 bits), Expect = 4.8e-17, Sum P(2) = 4.8e-17
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 10 PGLQFSPLLIGLLGVIAGFMMVATY 34
P L+FSP LI ++ V+A + TY
Sbjct: 34 PPLEFSPPLIAMVVVLAAAFLFVTY 58
>TAIR|locus:2142449 [details] [associations]
symbol:RING1 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0002238 "response to molecule of fungal origin"
evidence=IEP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP;RCA] [GO:0012501
"programmed cell death" evidence=IC] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0043068 "positive regulation of
programmed cell death" evidence=IMP] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0019761 "glucosinolate biosynthetic
process" evidence=RCA] [GO:0031348 "negative regulation of defense
response" evidence=RCA] [GO:0034976 "response to endoplasmic
reticulum stress" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006915 GO:GO:0009617 GO:GO:0006952 GO:GO:0046872
GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL353995 eggNOG:COG5540 GO:GO:0004842 GO:GO:0051865
EMBL:AK176500 IPI:IPI00537935 PIR:T50001 RefSeq:NP_196600.1
UniGene:At.1824 ProteinModelPortal:Q9LX93 SMR:Q9LX93 STRING:Q9LX93
EnsemblPlants:AT5G10380.1 GeneID:830902 KEGG:ath:AT5G10380
TAIR:At5g10380 HOGENOM:HOG000034176 InParanoid:Q9LX93 OMA:LHRSAIN
PhylomeDB:Q9LX93 ProtClustDB:CLSN2914912 Genevestigator:Q9LX93
GermOnline:AT5G10380 GO:GO:0043068 GO:GO:0012501 GO:GO:0002238
Uniprot:Q9LX93
Length = 301
Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 45/146 (30%), Positives = 71/146 (48%)
Query: 16 PLLIGLLGVIAGFMMVATYHCISLGXXXXXXXXXXXXXEPNTRQDT----ERNY-DHRQE 70
P I ++G I F+ + + + + + N ++D ER++ D
Sbjct: 43 PTSICVVGSIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQEDEDETEERDFSDFHHV 102
Query: 71 W--PRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPC 128
W P + S++ + + F+ + C+VCL +F+E E +R+LP+C H FH+ C
Sbjct: 103 WQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNC 162
Query: 129 IDMWLSSHSNCPLCRANANA-APPPH 153
ID WL SH NCPLCRA PPH
Sbjct: 163 IDTWLLSHKNCPLCRAPVLLITEPPH 188
>TAIR|locus:2089398 [details] [associations]
symbol:ATL2 "TOXICOS EN LEVADURA 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0006952
"defense response" evidence=IDA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0000165 "MAPK cascade" evidence=RCA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0009611 "response to wounding" evidence=RCA]
[GO:0009612 "response to mechanical stimulus" evidence=RCA]
[GO:0009697 "salicylic acid biosynthetic process" evidence=RCA]
[GO:0009814 "defense response, incompatible interaction"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0031348 "negative regulation of defense
response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] [GO:0042742 "defense response to
bacterium" evidence=RCA] [GO:0043900 "regulation of multi-organism
process" evidence=RCA] [GO:0050832 "defense response to fungus"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006952 GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 EMBL:L76926 EMBL:DQ086849
EMBL:AB022217 EMBL:AY062865 EMBL:AY081621 EMBL:AY088232
IPI:IPI00522954 PIR:T52079 RefSeq:NP_188294.1 UniGene:At.22750
ProteinModelPortal:Q8L9T5 SMR:Q8L9T5 EnsemblPlants:AT3G16720.1
GeneID:820924 KEGG:ath:AT3G16720 TAIR:At3g16720
HOGENOM:HOG000034169 InParanoid:Q8L9T5 OMA:KIMLSAI PhylomeDB:Q8L9T5
ProtClustDB:CLSN2913365 Genevestigator:Q8L9T5 GermOnline:AT3G16720
Uniprot:Q8L9T5
Length = 304
Score = 197 (74.4 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 35/60 (58%), Positives = 41/60 (68%)
Query: 86 MPVFRFSSKDCNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRA 144
+PVF FS + + CAVCL +F+E E RVLP C H FHV CIDMW SHS CPLCR+
Sbjct: 103 LPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRS 162
>TAIR|locus:2062008 [details] [associations]
symbol:AT2G47560 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000034169 ProtClustDB:CLSN2683616 EMBL:AC002535
EMBL:BT003983 EMBL:BT005009 IPI:IPI00533213 PIR:T00428
RefSeq:NP_182278.1 UniGene:At.12430 UniGene:At.66383
ProteinModelPortal:O22255 SMR:O22255 EnsemblPlants:AT2G47560.1
GeneID:819369 KEGG:ath:AT2G47560 TAIR:At2g47560 eggNOG:NOG326521
InParanoid:O22255 OMA:PIENGSK PhylomeDB:O22255
Genevestigator:O22255 GermOnline:AT2G47560 Uniprot:O22255
Length = 227
Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
Identities = 40/98 (40%), Positives = 59/98 (60%)
Query: 72 PRDRIRTSSVMRVLMPVFRFSSKDC----NEDTCAVCLGDFKEGEQVRVLPECLHLFHVP 127
PRD+ +V+ + P+F +SSK+ ++ C+VCL +F+E ++ R+LP+C H FHV
Sbjct: 76 PRDQALDQAVLDKI-PIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVD 134
Query: 128 CIDMWLSSHSNCPLCRANANAAPPPHLVLTLPDSGGAP 165
CID W S S CPLCRA PP ++ T S +P
Sbjct: 135 CIDTWFRSRSTCPLCRAPVQ--PPFQVIETGSSSSSSP 170
>TAIR|locus:2018334 [details] [associations]
symbol:AT1G04360 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 EMBL:AC000104 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 HOGENOM:HOG000034161 ProtClustDB:CLSN2681784
EMBL:BT004287 EMBL:BT006138 IPI:IPI00526956 PIR:B86175
RefSeq:NP_171931.1 UniGene:At.42456 ProteinModelPortal:P93823
SMR:P93823 PRIDE:P93823 EnsemblPlants:AT1G04360.1 GeneID:839540
KEGG:ath:AT1G04360 TAIR:At1g04360 InParanoid:P93823 OMA:HIDCIDI
PhylomeDB:P93823 Genevestigator:P93823 GermOnline:AT1G04360
Uniprot:P93823
Length = 381
Score = 197 (74.4 bits), Expect = 3.3e-15, P = 3.3e-15
Identities = 44/147 (29%), Positives = 75/147 (51%)
Query: 11 GLQFSPLLIGLLGVIA-GFMMVATYHCISLGXXXXXXXXXXXXXEPNTRQDTERNYDHRQ 69
G F L I ++G++A F++V+ Y + ++ Q+ Y +
Sbjct: 38 GTNFPILAIAVIGILATAFLLVSYYIFVIKCCLNWHQIDIFRRRRRSSDQNPLMIYSPHE 97
Query: 70 EWPRDRIRTSSVMRVLMPVFRFSSKDC---------NEDTCAVCLGDFKEGEQVRVLPEC 120
+R S +R + PVF+F +D N C+VCL +F+E E++R++P C
Sbjct: 98 V---NRGLDESAIRAI-PVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNC 153
Query: 121 LHLFHVPCIDMWLSSHSNCPLCRANAN 147
H+FH+ CID+WL ++NCPLCR + +
Sbjct: 154 CHVFHIDCIDIWLQGNANCPLCRTSVS 180
>TAIR|locus:2053791 [details] [associations]
symbol:AT2G42360 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0010200 "response to chitin" evidence=RCA] [GO:0015824 "proline
transport" evidence=RCA] [GO:0043090 "amino acid import"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AC005956
HOGENOM:HOG000034168 ProtClustDB:CLSN2683918 EMBL:DQ086853
EMBL:AY074652 EMBL:AK228239 IPI:IPI00531118 PIR:A84853
RefSeq:NP_181765.1 UniGene:At.67220 UniGene:At.70280
UniGene:At.75048 ProteinModelPortal:Q9SLC3 SMR:Q9SLC3 PRIDE:Q9SLC3
EnsemblPlants:AT2G42360.1 GeneID:818837 KEGG:ath:AT2G42360
TAIR:At2g42360 eggNOG:NOG287277 InParanoid:Q9SLC3 OMA:PNCKHIF
PhylomeDB:Q9SLC3 Genevestigator:Q9SLC3 GermOnline:AT2G42360
Uniprot:Q9SLC3
Length = 236
Score = 164 (62.8 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 31/89 (34%), Positives = 46/89 (51%)
Query: 65 YDHRQEWPRDRIRTSSVMRVLMPVFRFSSKD---CNEDTCAVCLGDFKEGEQVRVLPECL 121
+ H E P+ + + + +P F + D + CAVCL KE ++ R LP C
Sbjct: 71 FRHPFEMPKRGLNPTVIAS--LPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCK 128
Query: 122 HLFHVPCIDMWLSSHSNCPLCRANANAAP 150
H+FHV C+D WL++ S CP+CR P
Sbjct: 129 HIFHVDCVDTWLTTCSTCPVCRTEVEPRP 157
Score = 38 (18.4 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 7/17 (41%), Positives = 7/17 (41%)
Query: 56 NTRQDTERNYDHRQEWP 72
N R N DH WP
Sbjct: 4 NDRDHRRFNSDHHSFWP 20
>UNIPROTKB|Q9LRB7 [details] [associations]
symbol:EL5.1 "E3 ubiquitin-protein ligase EL5"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0048364 "root development"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005886
GO:GO:0051301 GO:GO:0046872 GO:GO:0008270 GO:GO:0048364
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 eggNOG:NOG265447
EMBL:AB045120 EMBL:AP005883 EMBL:AK243670 RefSeq:NP_001047149.1
UniGene:Os.3710 PDB:1IYM PDBsum:1IYM ProteinModelPortal:Q9LRB7
SMR:Q9LRB7 STRING:Q9LRB7 EnsemblPlants:LOC_Os02g35329.1
GeneID:4329685 KEGG:dosa:Os02t0559800-01 KEGG:dosa:Os02t0560200-01
KEGG:dosa:Os02t0560600-01 KEGG:dosa:Os02t0561000-01
KEGG:dosa:Os02t0561400-01 KEGG:dosa:Os02t0561800-01
KEGG:dosa:Os02t0561900-00 KEGG:dosa:Os11t0649801-00
KEGG:osa:4329685 Gramene:Q9LRB7 HOGENOM:HOG000243710 KO:K16286
OMA:LWSFGRQ ProtClustDB:CLSN2692836 EvolutionaryTrace:Q9LRB7
Uniprot:Q9LRB7
Length = 325
Score = 189 (71.6 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 30/52 (57%), Positives = 35/52 (67%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPPP 152
CAVCL + ++GE+ R LP C H FH C+DMWL SHS CPLCR PPP
Sbjct: 134 CAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVVVPPPP 185
>TAIR|locus:2153554 [details] [associations]
symbol:DAF "DEFECTIVE IN ANTHER DEHISCENCE1- ( DAD1-)
Activating Factor" species:3702 "Arabidopsis thaliana" [GO:0008270
"zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000237642 ProtClustDB:CLSN2913382 EMBL:AB010692
EMBL:BX830198 IPI:IPI00517240 RefSeq:NP_196147.1 UniGene:At.49733
ProteinModelPortal:Q9FLC6 SMR:Q9FLC6 EnsemblPlants:AT5G05280.1
GeneID:830410 KEGG:ath:AT5G05280 TAIR:At5g05280 InParanoid:Q9FLC6
OMA:KMKATEC PhylomeDB:Q9FLC6 Genevestigator:Q9FLC6
GermOnline:AT5G05280 Uniprot:Q9FLC6
Length = 176
Score = 186 (70.5 bits), Expect = 1.4e-14, P = 1.4e-14
Identities = 35/60 (58%), Positives = 43/60 (71%)
Query: 85 LMPVFRFSSKDCNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
++PV +S + + T C +CLGDF EGE VRVLP+C H FHV CID WL SHS+CP CR
Sbjct: 96 VIPVDSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCPTCR 155
>TAIR|locus:2207066 [details] [associations]
symbol:AT1G72220 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
EMBL:AC067754 EMBL:AY052232 EMBL:BT002303 EMBL:AY084564
IPI:IPI00537254 PIR:G96745 RefSeq:NP_177367.1 UniGene:At.26428
ProteinModelPortal:Q8LFY8 SMR:Q8LFY8 EnsemblPlants:AT1G72220.1
GeneID:843554 KEGG:ath:AT1G72220 TAIR:At1g72220
HOGENOM:HOG000034163 InParanoid:Q8LFY8 OMA:INSITIC PhylomeDB:Q8LFY8
ProtClustDB:CLSN2912699 Genevestigator:Q8LFY8 GermOnline:AT1G72220
Uniprot:Q8LFY8
Length = 413
Score = 192 (72.6 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 46/127 (36%), Positives = 66/127 (51%)
Query: 24 VIAGFMMVATYHCISLGXXXXXXXXXXXXXEPNTRQDTERNYDHRQ-EWPRDRIRTSSVM 82
++ GF +VA + S+ E N E D Q + P IRT+ +
Sbjct: 96 LLTGFFLVAKFFSDSVNRVNQGTYQSDN--EDNDTVMEEEFQDREQVDHPIWLIRTTGLQ 153
Query: 83 RVLM---PVFRFSSKD-CNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHS 137
+ ++ + + D E T C VCL +F+E E +R+LP+C H FH+ CID WLSSH+
Sbjct: 154 QSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHT 213
Query: 138 NCPLCRA 144
NCPLCRA
Sbjct: 214 NCPLCRA 220
>TAIR|locus:2081740 [details] [associations]
symbol:ATL5 "AtL5" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0006461 "protein complex assembly"
evidence=TAS] [GO:0016020 "membrane" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0016020 GO:GO:0006461 GO:GO:0046872
GO:GO:0008270 EMBL:AL162651 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000034169 EMBL:AF132015 EMBL:BT009649
IPI:IPI00522876 PIR:T48058 RefSeq:NP_191828.1 UniGene:At.4826
ProteinModelPortal:Q9LZJ6 SMR:Q9LZJ6 EnsemblPlants:AT3G62690.1
GeneID:825443 KEGG:ath:AT3G62690 GeneFarm:4973 TAIR:At3g62690
eggNOG:NOG304339 InParanoid:Q9LZJ6 OMA:PMEACER
ProtClustDB:CLSN2683616 Genevestigator:Q9LZJ6 GermOnline:AT3G62690
Uniprot:Q9LZJ6
Length = 257
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 86 MPVFRFSSKDCNE--DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P+F +S K + C+VCL +F+E ++ RVLP+C H+FHV CID W S S+CPLCR
Sbjct: 96 IPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCR 155
Query: 144 ANANAAPP 151
A A P
Sbjct: 156 APVQPAQP 163
>TAIR|locus:2125364 [details] [associations]
symbol:AT4G35840 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 EMBL:AL031986 EMBL:AL161588 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009535 EMBL:AJ400897 EMBL:AK118022
EMBL:BT006221 IPI:IPI00518433 PIR:T04694 RefSeq:NP_195309.2
UniGene:At.31379 ProteinModelPortal:Q8GT75 SMR:Q8GT75
DIP:DIP-40179N IntAct:Q8GT75 PaxDb:Q8GT75 PRIDE:Q8GT75
EnsemblPlants:AT4G35840.1 GeneID:829738 KEGG:ath:AT4G35840
GeneFarm:2883 TAIR:At4g35840 eggNOG:NOG260090 HOGENOM:HOG000242081
InParanoid:Q8GT75 OMA:FIDNNDL PhylomeDB:Q8GT75
ProtClustDB:CLSN2686667 Genevestigator:Q8GT75 GermOnline:AT4G35840
Uniprot:Q8GT75
Length = 236
Score = 185 (70.2 bits), Expect = 1.8e-14, P = 1.8e-14
Identities = 29/47 (61%), Positives = 37/47 (78%)
Query: 97 NEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
N+D+C+VCL DF+ GE VR LP C H+FH+PCID WL H +CP+CR
Sbjct: 187 NKDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLFRHGSCPMCR 233
>TAIR|locus:2103162 [details] [associations]
symbol:DAFL1 "DAF-Like gene 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
EMBL:AC011708 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 EMBL:BT004771 EMBL:AK227982 IPI:IPI00541327
RefSeq:NP_187702.1 UniGene:At.27986 ProteinModelPortal:Q9SG96
SMR:Q9SG96 EnsemblPlants:AT3G10910.1 GeneID:820261
KEGG:ath:AT3G10910 TAIR:At3g10910 eggNOG:NOG288147
InParanoid:Q9SG96 OMA:EPQANAP PhylomeDB:Q9SG96
ProtClustDB:CLSN2913382 Genevestigator:Q9SG96 GermOnline:AT3G10910
Uniprot:Q9SG96
Length = 181
Score = 183 (69.5 bits), Expect = 3.0e-14, P = 3.0e-14
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 86 MPVFRFSSK--DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+PV + S D C +CLGDF++GE+VRVLP+C H FHV CID WL S S+CP CR
Sbjct: 97 IPVGLYGSGIIDMKATECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCR 156
Query: 144 ANANAAPPPHLVLTLPD 160
+ P + ++ D
Sbjct: 157 QSLLLEQPSPMAVSRRD 173
>TAIR|locus:2081907 [details] [associations]
symbol:ATL4 "TOXICOS EN LEVADURA 4" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AF132014
EMBL:DQ059115 EMBL:AL163852 EMBL:BT028933 EMBL:AF079184
IPI:IPI00524160 PIR:T49217 PIR:T51855 PIR:T52407 RefSeq:NP_191581.1
UniGene:At.21814 ProteinModelPortal:Q9LY41 SMR:Q9LY41 PRIDE:Q9LY41
EnsemblPlants:AT3G60220.1 GeneID:825192 KEGG:ath:AT3G60220
GeneFarm:4972 TAIR:At3g60220 eggNOG:NOG296717 HOGENOM:HOG000239370
InParanoid:Q9LY41 OMA:SARWSQG PhylomeDB:Q9LY41
ProtClustDB:CLSN2915613 Genevestigator:Q9LY41 Uniprot:Q9LY41
Length = 334
Score = 186 (70.5 bits), Expect = 3.5e-14, P = 3.5e-14
Identities = 44/133 (33%), Positives = 63/133 (47%)
Query: 17 LLIGLLGVIAGFMMVATYHCISLGXXXXXXXXXXXXXEPNTRQDTERNYDHRQEWPRDRI 76
+LI L+ ++ + C++ D+ R HR +R
Sbjct: 32 ILILLMTLLISVSICFLLRCLNRCSHRSVLPLSSSSSVATVTSDSRRFSGHRVSPETER- 90
Query: 77 RTSSVMRVLMPVFRFSS-----KDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDM 131
SSV+ L P+F+FSS N CAVCL F+ +Q+R+LP C H FH CID+
Sbjct: 91 --SSVLDSL-PIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDI 147
Query: 132 WLSSHSNCPLCRA 144
WL S+ CPLCR+
Sbjct: 148 WLVSNQTCPLCRS 160
>TAIR|locus:2124695 [details] [associations]
symbol:AT4G10150 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG238959
HOGENOM:HOG000006232 ProtClustDB:CLSN2685663 EMBL:AF096373
EMBL:AL049487 EMBL:AL161516 EMBL:AY122914 IPI:IPI00517691
PIR:T04065 RefSeq:NP_192753.1 UniGene:At.33650
ProteinModelPortal:Q9SN28 SMR:Q9SN28 EnsemblPlants:AT4G10150.1
GeneID:826606 KEGG:ath:AT4G10150 TAIR:At4g10150 InParanoid:Q9SN28
OMA:ICFTFIV PhylomeDB:Q9SN28 Genevestigator:Q9SN28
GermOnline:AT4G10150 Uniprot:Q9SN28
Length = 236
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 33/80 (41%), Positives = 52/80 (65%)
Query: 79 SSVMRVLMPVFRFSSKDCNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHS 137
S +R ++PV + +D+ C+VCLGD++ E+++ +P C H FH+ CID+WL+SH+
Sbjct: 88 SKDIREMLPVVIYKESFIVKDSQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHT 147
Query: 138 NCPLCRANANAAPPPHLVLT 157
CPLCR + P P L L+
Sbjct: 148 TCPLCRLSL--IPKPSLDLS 165
>TAIR|locus:2124700 [details] [associations]
symbol:AT4G10160 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 eggNOG:NOG302028
HOGENOM:HOG000006232 ProtClustDB:CLSN2685663 EMBL:DQ059118
EMBL:AF096373 EMBL:AL049487 EMBL:AL161516 EMBL:AY122915
IPI:IPI00532160 PIR:T04066 RefSeq:NP_192754.1 UniGene:At.33649
ProteinModelPortal:Q9SN27 SMR:Q9SN27 IntAct:Q9SN27
EnsemblPlants:AT4G10160.1 GeneID:826607 KEGG:ath:AT4G10160
TAIR:At4g10160 InParanoid:Q9SN27 PhylomeDB:Q9SN27
Genevestigator:Q9SN27 Uniprot:Q9SN27
Length = 225
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 32/80 (40%), Positives = 52/80 (65%)
Query: 79 SSVMRVLMPVFRFS-SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHS 137
S +R ++P+ + S N+ C+VCLGD++ E+++ +P C H FH+ CID+WL+SH+
Sbjct: 74 SKDIREMLPIVIYKESFTVNDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHT 133
Query: 138 NCPLCRANANAAPPPHLVLT 157
CPLCR + P P + L+
Sbjct: 134 TCPLCRLSL--IPKPSVDLS 151
>TAIR|locus:2181032 [details] [associations]
symbol:DAFL2 "DAF-Like gene 2" species:3702 "Arabidopsis
thaliana" [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000237642 EMBL:AL162351 EMBL:BT010682 EMBL:BT010973
IPI:IPI00526186 PIR:T48209 RefSeq:NP_195808.1 UniGene:At.33488
UniGene:At.70718 ProteinModelPortal:Q9LZV8 SMR:Q9LZV8
EnsemblPlants:AT5G01880.1 GeneID:831691 KEGG:ath:AT5G01880
TAIR:At5g01880 InParanoid:Q9LZV8 OMA:ATECAIC PhylomeDB:Q9LZV8
ProtClustDB:CLSN2916663 Genevestigator:Q9LZV8 GermOnline:AT5G01880
Uniprot:Q9LZV8
Length = 159
Score = 181 (68.8 bits), Expect = 4.9e-14, P = 4.9e-14
Identities = 32/59 (54%), Positives = 40/59 (67%)
Query: 87 PVFRFSSKDCN--EDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
PV + S + CA+CLG+F +GE+VRVLP C H FH+ CID WL SHS+CP CR
Sbjct: 89 PVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWLVSHSSCPNCR 147
>TAIR|locus:2007008 [details] [associations]
symbol:AT1G33480 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC051630
EMBL:AK220582 IPI:IPI00538312 PIR:F86458 RefSeq:NP_174614.2
UniGene:At.71262 ProteinModelPortal:Q570X5 SMR:Q570X5 PRIDE:Q570X5
EnsemblPlants:AT1G33480.1 GeneID:840242 KEGG:ath:AT1G33480
TAIR:At1g33480 eggNOG:NOG238959 HOGENOM:HOG000006232
InParanoid:Q570X5 PhylomeDB:Q570X5 ProtClustDB:CLSN2685663
Genevestigator:Q570X5 GermOnline:AT1G33480 Uniprot:Q570X5
Length = 261
Score = 180 (68.4 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 35/97 (36%), Positives = 55/97 (56%)
Query: 79 SSVMRVLMPVFRFSSKDCNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHS 137
S +R ++P+ F D+ C+VCLGD++ ++++ +P C H FH+ CID+WL+SH+
Sbjct: 77 SKELREMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHT 136
Query: 138 NCPLCRA------NANAAPPPHLVLTLPDSGGAPQPE 168
CPLCR + + P L PD + QPE
Sbjct: 137 TCPLCRLALIPSRSRQSQDDPVPSLVSPDEEVSSQPE 173
>TAIR|locus:505006547 [details] [associations]
symbol:AT4G33565 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005886 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 IPI:IPI00524769
RefSeq:NP_567926.4 UniGene:At.31572 UniGene:At.75651
ProteinModelPortal:F4JJ02 SMR:F4JJ02 EnsemblPlants:AT4G33565.1
GeneID:829496 KEGG:ath:AT4G33565 OMA:WHIRTIG Uniprot:F4JJ02
Length = 367
Score = 185 (70.2 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 88 VFRFSSKD-CNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRA 144
V ++S KD E T C+VCL +F+E E +R+LP+C H FH+ CID WL SH+NCPLCRA
Sbjct: 202 VCQYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRA 260
>TAIR|locus:2156867 [details] [associations]
symbol:AT5G66070 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00657375 RefSeq:NP_001032158.1 UniGene:At.28882
ProteinModelPortal:F4JZ26 SMR:F4JZ26 EnsemblPlants:AT5G66070.2
GeneID:836739 KEGG:ath:AT5G66070 OMA:IDKWLLR Uniprot:F4JZ26
Length = 245
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 86 MPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P R + +C+VCL DF+ GE VR LP C H+FH+PCID WL H++CPLCR
Sbjct: 185 IPKVRITDTSPEIVSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 242
>TAIR|locus:2140069 [details] [associations]
symbol:AT4G40070 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL161596 eggNOG:COG5540 EMBL:AL035708 HOGENOM:HOG000239182
EMBL:AF419600 EMBL:BT000540 IPI:IPI00542846 PIR:H85474 PIR:T06113
RefSeq:NP_568080.2 UniGene:At.27385 ProteinModelPortal:Q8W571
SMR:Q8W571 PRIDE:Q8W571 EnsemblPlants:AT4G40070.1 GeneID:830170
KEGG:ath:AT4G40070 TAIR:At4g40070 OMA:CRSGEES PhylomeDB:Q8W571
ProtClustDB:CLSN2918858 Genevestigator:Q8W571 GermOnline:AT4G40070
Uniprot:Q8W571
Length = 323
Score = 182 (69.1 bits), Expect = 8.7e-14, P = 8.7e-14
Identities = 34/67 (50%), Positives = 47/67 (70%)
Query: 87 PVFRFSS-KDC---NEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPL 141
PVF +SS K+ ++D CA+CL + ++ E VR+LP C HLFH+ CID WL SH+ CP+
Sbjct: 105 PVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDTWLYSHATCPV 164
Query: 142 CRANANA 148
CR+N A
Sbjct: 165 CRSNLTA 171
>TAIR|locus:505006488 [details] [associations]
symbol:AT4G17245 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
HOGENOM:HOG000237642 ProtClustDB:CLSN2714317 EMBL:AY054245
EMBL:AF458337 IPI:IPI00532956 RefSeq:NP_567525.1 UniGene:At.26389
ProteinModelPortal:Q940N3 SMR:Q940N3 EnsemblPlants:AT4G17245.1
GeneID:827437 KEGG:ath:AT4G17245 TAIR:At4g17245 eggNOG:NOG246131
InParanoid:Q940N3 OMA:LERCKHG PhylomeDB:Q940N3
Genevestigator:Q940N3 Uniprot:Q940N3
Length = 166
Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 32/64 (50%), Positives = 42/64 (65%)
Query: 97 NEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSS-HSNCPLCRANANAAPPPHLV 155
NE C +CL +F++G+ +RVL C H FHV CI WLSS HS+CP CR N ++PP
Sbjct: 98 NEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQKWLSSSHSSCPTCRTNIFSSPPQLHS 157
Query: 156 LTLP 159
+LP
Sbjct: 158 QSLP 161
>TAIR|locus:2197026 [details] [associations]
symbol:AT1G53820 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000034162 ProtClustDB:CLSN2715378 EMBL:AC009324
EMBL:DQ056496 IPI:IPI00517219 RefSeq:NP_175785.1 UniGene:At.52187
ProteinModelPortal:P0C035 SMR:P0C035 PRIDE:P0C035
EnsemblPlants:AT1G53820.1 GeneID:841819 KEGG:ath:AT1G53820
TAIR:At1g53820 InParanoid:P0C035 OMA:IDEEEPK PhylomeDB:P0C035
Genevestigator:P0C035 GermOnline:AT1G53820 Uniprot:P0C035
Length = 310
Score = 178 (67.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 34/57 (59%), Positives = 39/57 (68%)
Query: 88 VFRFSS-KDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
VF+ + KD E CAVCL D +G++ RVLP C H FHV CIDMW SHS CPLCR
Sbjct: 108 VFKCTDFKDGLE--CAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCR 162
>TAIR|locus:2090980 [details] [associations]
symbol:AT3G14320 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB022220 IPI:IPI00542849
RefSeq:NP_188049.1 UniGene:At.65086 ProteinModelPortal:Q9LUL6
SMR:Q9LUL6 EnsemblPlants:AT3G14320.1 GeneID:820652
KEGG:ath:AT3G14320 TAIR:At3g14320 eggNOG:NOG324121
HOGENOM:HOG000034170 InParanoid:Q9LUL6 OMA:SNSTCPI PhylomeDB:Q9LUL6
ProtClustDB:CLSN2915567 Genevestigator:Q9LUL6 GermOnline:AT3G14320
Uniprot:Q9LUL6
Length = 204
Score = 175 (66.7 bits), Expect = 2.1e-13, P = 2.1e-13
Identities = 34/86 (39%), Positives = 49/86 (56%)
Query: 60 DTERNYD-HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDT-CAVCLGDFKEGEQVRVL 117
D + N D H ++R+ + +P+ F++KD C VCL + +G++ RVL
Sbjct: 45 DHDNNNDGHVSITIKERVGIKPYVLRSIPIVDFNTKDFKYVLECVVCLSELADGDKARVL 104
Query: 118 PECLHLFHVPCIDMWLSSHSNCPLCR 143
P C H FHV CID WL S+S CP+CR
Sbjct: 105 PSCDHWFHVECIDSWLQSNSTCPICR 130
>TAIR|locus:2176436 [details] [associations]
symbol:AT5G43420 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 EMBL:AB025638 UniGene:At.7156 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 EMBL:BT008334 IPI:IPI00524721
RefSeq:NP_199155.1 UniGene:At.30118 ProteinModelPortal:Q9LSW9
SMR:Q9LSW9 PaxDb:Q9LSW9 EnsemblPlants:AT5G43420.1 GeneID:834362
KEGG:ath:AT5G43420 TAIR:At5g43420 HOGENOM:HOG000034161
InParanoid:Q9LSW9 OMA:PIFKFKK PhylomeDB:Q9LSW9
ProtClustDB:CLSN2681784 Genevestigator:Q9LSW9 Uniprot:Q9LSW9
Length = 375
Score = 180 (68.4 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 47/159 (29%), Positives = 77/159 (48%)
Query: 11 GLQFSPLLIGLLGVIA-GFMMVATYH-----CISLGXXXXXXXXXXXXXEPNTRQDTERN 64
G F L + ++G++A F++V+ Y C++ N QD
Sbjct: 31 GTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWHRIDILGRFSLSRRRRND-QDPLMV 89
Query: 65 YDHRQEWPRDRIRTSSVMRVLMPVFRFSSK-DCNEDT---------------CAVCLGDF 108
Y R R SV+R + P+F+F + D N+ C+VCL +F
Sbjct: 90 YSPEL---RSRGLDESVIRAI-PIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEF 145
Query: 109 KEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANAN 147
++ E++R++P C HLFH+ CID+WL +++NCPLCR +
Sbjct: 146 QDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVS 184
Score = 176 (67.0 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 27/57 (47%), Positives = 43/57 (75%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRA--NANAAPPPHLV 155
C+VCL +F++ E++R++P C HLFH+ CID+WL +++NCPLCR + + + PP V
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRV 194
>TAIR|locus:2193992 [details] [associations]
symbol:ATL3 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
EMBL:AC067754 EMBL:AF132013 EMBL:AC016529 EMBL:BT010140
IPI:IPI00529429 PIR:H96746 RefSeq:NP_177375.1 UniGene:At.11694
UniGene:At.71796 ProteinModelPortal:Q9XF63 SMR:Q9XF63
EnsemblPlants:AT1G72310.1 GeneID:843563 KEGG:ath:AT1G72310
GeneFarm:4970 TAIR:At1g72310 HOGENOM:HOG000034162 InParanoid:Q9XF63
OMA:YAKRYLG PhylomeDB:Q9XF63 ProtClustDB:CLSN2715378
Genevestigator:Q9XF63 GermOnline:AT1G72310 Uniprot:Q9XF63
Length = 324
Score = 178 (67.7 bits), Expect = 2.5e-13, P = 2.5e-13
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 86 MPVFRFSSKDCNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P+ F C + C++CL + +G++ R+LP+C H FHV CIDMW SHS CP+CR
Sbjct: 111 LPIVFFRQDSCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICR 169
>TAIR|locus:2011686 [details] [associations]
symbol:ATL8 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0010014 "meristem
initiation" evidence=RCA] [GO:0010075 "regulation of meristem
growth" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC012394 eggNOG:COG5540 HOGENOM:HOG000237642
ProtClustDB:CLSN2679434 EMBL:AC015450 EMBL:AK118893 EMBL:BT005559
EMBL:AY086760 IPI:IPI00519939 PIR:G96791 RefSeq:NP_177767.1
UniGene:At.34661 ProteinModelPortal:Q8LC69 SMR:Q8LC69 STRING:Q8LC69
EnsemblPlants:AT1G76410.1 GeneID:843974 KEGG:ath:AT1G76410
TAIR:At1g76410 InParanoid:Q8LC69 OMA:KLVECAI PhylomeDB:Q8LC69
Genevestigator:Q8LC69 GermOnline:AT1G76410 Uniprot:Q8LC69
Length = 185
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 33/69 (47%), Positives = 43/69 (62%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPPPHLVLTLPD 160
CA+CL +F G+++RVLP+C H FHV CID WL SHS+CP CR H LP
Sbjct: 104 CAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCR-QILVVTRCHKCGGLPG 162
Query: 161 SGGA-PQPE 168
S + P+P+
Sbjct: 163 SSSSGPEPD 171
>TAIR|locus:2825708 [details] [associations]
symbol:AT1G20823 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006952 GO:GO:0046872
GO:GO:0008270 EMBL:AC069251 GO:GO:0016567 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000237642 EMBL:AY045849 IPI:IPI00544827 PIR:F86340
RefSeq:NP_173506.1 UniGene:At.15492 ProteinModelPortal:Q9LM69
SMR:Q9LM69 STRING:Q9LM69 PRIDE:Q9LM69 ProMEX:Q9LM69
EnsemblPlants:AT1G20823.1 GeneID:838674 KEGG:ath:AT1G20823
TAIR:At1g20823 InParanoid:Q9LM69 OMA:EIRIKQG PhylomeDB:Q9LM69
ProtClustDB:CLSN2679434 Genevestigator:Q9LM69 GermOnline:AT1G20823
Uniprot:Q9LM69
Length = 197
Score = 174 (66.3 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 30/61 (49%), Positives = 40/61 (65%)
Query: 86 MPVFRFSSKDCNEDT---CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLC 142
+P FS + + CA+CL +F G+++RVLP+C H FHV CID WL SHS+CP C
Sbjct: 93 LPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDTWLGSHSSCPSC 152
Query: 143 R 143
R
Sbjct: 153 R 153
>TAIR|locus:2117622 [details] [associations]
symbol:RHA3B "RING-H2 finger A3B" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010200 "response
to chitin" evidence=IEP] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0010286 "heat acclimation" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006952 GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 EMBL:AL161587 HOGENOM:HOG000237642
ProtClustDB:CLSN2683892 EMBL:AF078825 EMBL:DQ059126 EMBL:AL117188
EMBL:BT030633 EMBL:AY087082 IPI:IPI00540490 PIR:T41745
RefSeq:NP_195273.1 UniGene:At.23630 ProteinModelPortal:Q9ZT49
SMR:Q9ZT49 STRING:Q9ZT49 EnsemblPlants:AT4G35480.1 GeneID:829700
KEGG:ath:AT4G35480 GeneFarm:4095 TAIR:At4g35480 InParanoid:Q9ZT49
OMA:CAICITE PhylomeDB:Q9ZT49 Genevestigator:Q9ZT49 Uniprot:Q9ZT49
Length = 200
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 26/43 (60%), Positives = 34/43 (79%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
CA+C+ +F EGE++R+LP C H FHV CID WL+S S+CP CR
Sbjct: 113 CAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155
>TAIR|locus:1009023242 [details] [associations]
symbol:AT3G60966 "AT3G60966" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:DQ487553 IPI:IPI00656861
RefSeq:NP_001030907.1 UniGene:At.70726 UniGene:At.73258
ProteinModelPortal:Q1G3N1 SMR:Q1G3N1 EnsemblPlants:AT3G60966.1
GeneID:3769752 KEGG:ath:AT3G60966 TAIR:At3g60966 OMA:CEYITVS
PhylomeDB:Q1G3N1 Genevestigator:Q2V3M4 Uniprot:Q1G3N1
Length = 139
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 34/67 (50%), Positives = 40/67 (59%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP--P 152
D + CAVCL + +EGE++R L C H FH CID WLS S CPLCRA PP P
Sbjct: 56 DSSPPFCAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQIPPLPPASP 115
Query: 153 HLVLTLP 159
L+L P
Sbjct: 116 MLLLFFP 122
>UNIPROTKB|Q8H7N9 [details] [associations]
symbol:LOC_Os03g08920 "E3 ubiquitin-protein ligase
Os03g0188200" species:39947 "Oryza sativa Japonica Group"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0046872
GO:GO:0008270 EMBL:DP000009 EMBL:AP008209 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 EMBL:AC121489
EMBL:AK058578 RefSeq:NP_001049216.1 UniGene:Os.37432
ProteinModelPortal:Q8H7N9 EnsemblPlants:LOC_Os03g08920.1
GeneID:4331886 KEGG:osa:4331886 Gramene:Q8H7N9 eggNOG:NOG237795
OMA:HVMKELA ProtClustDB:CLSN2693618 Uniprot:Q8H7N9
Length = 353
Score = 177 (67.4 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 33/68 (48%), Positives = 43/68 (63%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPPPHLVLTLPD 160
CAVCL +F + +++RVLP C H+FH CID WL++ CPLCRAN A PP + L +
Sbjct: 133 CAVCLAEFADSDELRVLPACCHVFHPDCIDPWLAAAVTCPLCRANLTA-PP--VSLAAAE 189
Query: 161 SGGAPQPE 168
S PE
Sbjct: 190 SSDLTAPE 197
>TAIR|locus:2061698 [details] [associations]
symbol:AT2G20030 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010043
"response to zinc ion" evidence=RCA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 EMBL:AC006081
IPI:IPI00548965 PIR:B84584 RefSeq:NP_179593.1 UniGene:At.52839
ProteinModelPortal:Q9SL78 SMR:Q9SL78 PaxDb:Q9SL78 PRIDE:Q9SL78
EnsemblPlants:AT2G20030.1 GeneID:816522 KEGG:ath:AT2G20030
TAIR:At2g20030 HOGENOM:HOG000034165 InParanoid:Q9SL78 OMA:REGNENI
PhylomeDB:Q9SL78 ProtClustDB:CLSN2683296 Genevestigator:Q9SL78
GermOnline:AT2G20030 Uniprot:Q9SL78
Length = 390
Score = 178 (67.7 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 31/64 (48%), Positives = 42/64 (65%)
Query: 86 MPVFRFSS-KDCNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P FRFS+ K + C+VCL F++ E +R+LP+C H FH+ CID WL H+ CPLCR
Sbjct: 107 LPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCR 166
Query: 144 ANAN 147
N
Sbjct: 167 NRVN 170
>TAIR|locus:2141005 [details] [associations]
symbol:AT4G17920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
EMBL:AL161547 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL021889 HOGENOM:HOG000034167 IPI:IPI00529622 PIR:T05078
RefSeq:NP_193526.1 UniGene:At.64189 ProteinModelPortal:O49691
SMR:O49691 EnsemblPlants:AT4G17920.1 GeneID:827517
KEGG:ath:AT4G17920 TAIR:At4g17920 eggNOG:NOG237727
InParanoid:O49691 OMA:FESHRTC PhylomeDB:O49691
ProtClustDB:CLSN2916158 Genevestigator:O49691 Uniprot:O49691
Length = 289
Score = 173 (66.0 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 82 MRVL--MPVFRFSS-KDCNEDT----CAVCLGDFKEGEQV-RVLPECLHLFHVPCIDMWL 133
+R++ P F +SS KD E+ CA+CL +F +G+ V R+L C H+FH CID+W
Sbjct: 84 LRIINSFPTFPYSSVKDLREEKYGLECAICLLEF-DGDHVLRLLTTCYHVFHQECIDLWF 142
Query: 134 SSHSNCPLCRANANAAPPP 152
SH CP+CR + + PPP
Sbjct: 143 ESHRTCPVCRRDLDPPPPP 161
>TAIR|locus:2074678 [details] [associations]
symbol:AT3G11110 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC009991 EMBL:AC073395 EMBL:BT031381 IPI:IPI00524656
RefSeq:NP_187722.1 UniGene:At.53265 ProteinModelPortal:Q9SRM0
SMR:Q9SRM0 EnsemblPlants:AT3G11110.1 GeneID:820282
KEGG:ath:AT3G11110 TAIR:At3g11110 eggNOG:NOG241452
HOGENOM:HOG000238431 InParanoid:Q9SRM0 OMA:EKECCIC PhylomeDB:Q9SRM0
ProtClustDB:CLSN2684057 Genevestigator:Q9SRM0 GermOnline:AT3G11110
Uniprot:Q9SRM0
Length = 158
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 90 RFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
R +++ E C +CLG F+EGE+++VLP C H +H C+D WL + S+CPLCR +
Sbjct: 96 RERAEEEEEKECCICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVS 151
>UNIPROTKB|I3L0L6 [details] [associations]
symbol:RNF167 "E3 ubiquitin-protein ligase RNF167"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC004771
HGNC:HGNC:24544 ChiTaRS:RNF167 ProteinModelPortal:I3L0L6 SMR:I3L0L6
Ensembl:ENST00000576229 Bgee:I3L0L6 Uniprot:I3L0L6
Length = 315
Score = 158 (60.7 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 28/89 (31%), Positives = 50/89 (56%)
Query: 63 RNYDHRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLH 122
R HR+ R+R+ + ++ P + D D CA+CL ++++G+++RVLP C H
Sbjct: 160 RCIQHRKRLQRNRLTKEQLKQI--PTHDYQKGD-QYDVCAICLDEYEDGDKLRVLP-CAH 215
Query: 123 LFHVPCIDMWLS-SHSNCPLCRANANAAP 150
+H C+D WL+ + CP+C+ + P
Sbjct: 216 AYHSRCVDPWLTQTRKTCPICKQPVHRGP 244
Score = 34 (17.0 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 18 LIGLLGVIAGFMMVATYHCI 37
++GLL + G +M+A CI
Sbjct: 145 IVGLLVLAMGAVMIA--RCI 162
>TAIR|locus:2053863 [details] [associations]
symbol:RHA3A "RING-H2 finger A3A" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC007584
HOGENOM:HOG000237642 EMBL:AF078824 EMBL:AF370239 EMBL:AY062961
IPI:IPI00548768 PIR:T51844 RefSeq:NP_179337.1 UniGene:At.25384
ProteinModelPortal:O22755 SMR:O22755 STRING:O22755
EnsemblPlants:AT2G17450.1 GeneID:816251 KEGG:ath:AT2G17450
GeneFarm:4094 TAIR:At2g17450 eggNOG:NOG257865 InParanoid:O22755
OMA:DSTECAI PhylomeDB:O22755 ProtClustDB:CLSN2683892
Genevestigator:O22755 GermOnline:AT2G17450 Uniprot:O22755
Length = 185
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 28/52 (53%), Positives = 38/52 (73%)
Query: 92 SSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
++++ + CA+CL DF +GE++RVLP C H FHV CID WL S S+CP CR
Sbjct: 93 AAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCR 144
>TAIR|locus:2044757 [details] [associations]
symbol:ATL9 "Arabidopsis toxicos en levadura 9"
species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0050832 "defense
response to fungus" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0050832
GO:GO:0046872 GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 HOGENOM:HOG000239182 EMBL:AC004238
EMBL:DQ059110 EMBL:BT015733 EMBL:BT020192 EMBL:AK228813
IPI:IPI00523599 PIR:T00481 RefSeq:NP_181045.1 UniGene:At.37726
ProteinModelPortal:O64763 SMR:O64763 EnsemblPlants:AT2G35000.1
GeneID:818064 KEGG:ath:AT2G35000 TAIR:At2g35000 eggNOG:NOG282867
InParanoid:O64763 PhylomeDB:O64763 ProtClustDB:CLSN2913188
Genevestigator:O64763 Uniprot:O64763
Length = 378
Score = 175 (66.7 bits), Expect = 8.8e-13, P = 8.8e-13
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
CAVCL +F++ E +R++P C H+FH C+D+WLS HS CPLCRA+
Sbjct: 135 CAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRAD 179
>TAIR|locus:2122363 [details] [associations]
symbol:AT4G09120 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC005359
HOGENOM:HOG000239182 EMBL:AL161514 ProtClustDB:CLSN2685392
IPI:IPI00517587 PIR:D85092 RefSeq:NP_192651.1 UniGene:At.54225
ProteinModelPortal:Q9M0R5 SMR:Q9M0R5 PaxDb:Q9M0R5
EnsemblPlants:AT4G09120.1 GeneID:826490 KEGG:ath:AT4G09120
TAIR:At4g09120 eggNOG:NOG270881 InParanoid:Q9M0R5 OMA:NLIRRSH
PhylomeDB:Q9M0R5 Genevestigator:Q9M0R5 Uniprot:Q9M0R5
Length = 345
Score = 173 (66.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP---PHLVLT 157
CA+CL +F++ E +R +P C H FH CID+WLSS S CP+CRAN + P P+L +
Sbjct: 123 CAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSLKPGESYPYLNMD 182
Query: 158 LPDSGG 163
+ ++GG
Sbjct: 183 V-ETGG 187
>TAIR|locus:2062892 [details] [associations]
symbol:AT2G46160 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC005397 HOGENOM:HOG000237642 EMBL:AY074641 IPI:IPI00516262
PIR:D84899 RefSeq:NP_182139.1 UniGene:At.37022
ProteinModelPortal:O82353 SMR:O82353 EnsemblPlants:AT2G46160.1
GeneID:819223 KEGG:ath:AT2G46160 TAIR:At2g46160 eggNOG:NOG249940
InParanoid:O82353 OMA:CLCEYKE PhylomeDB:O82353
ProtClustDB:CLSN2683451 Genevestigator:O82353 Uniprot:O82353
Length = 214
Score = 168 (64.2 bits), Expect = 1.2e-12, P = 1.2e-12
Identities = 28/72 (38%), Positives = 45/72 (62%)
Query: 98 EDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPPPHLVLT 157
+ TC++CL ++KE E +R++PEC H FH+ C+D WL + +CP+CR N+ P L+
Sbjct: 135 DTTCSICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCR-NSPLPTPTSTPLS 193
Query: 158 LPDSGGAPQPEF 169
P S P ++
Sbjct: 194 TPLSEVVPLSQY 205
>UNIPROTKB|Q9H6Y7 [details] [associations]
symbol:RNF167 "E3 ubiquitin-protein ligase RNF167"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0012505 "endomembrane system" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0045786 "negative regulation of
cell cycle" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0000209 "protein polyubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005737 EMBL:CH471108 GO:GO:0046872
GO:GO:0008270 GO:GO:0012505 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 GO:GO:0004842 GO:GO:0000209 GO:GO:0045786
EMBL:AL050060 EMBL:AL834284 EMBL:AK025329 EMBL:AY203930
EMBL:CR457340 EMBL:BC010139 IPI:IPI00023511 PIR:T08729
RefSeq:NP_056343.1 UniGene:Hs.7158 ProteinModelPortal:Q9H6Y7
SMR:Q9H6Y7 IntAct:Q9H6Y7 STRING:Q9H6Y7 PhosphoSite:Q9H6Y7
DMDM:74733620 PaxDb:Q9H6Y7 PeptideAtlas:Q9H6Y7 PRIDE:Q9H6Y7
Ensembl:ENST00000262482 Ensembl:ENST00000571816
Ensembl:ENST00000572430 Ensembl:ENST00000575111 GeneID:26001
KEGG:hsa:26001 UCSC:uc002fzs.3 CTD:26001 GeneCards:GC17P004845
HGNC:HGNC:24544 MIM:610431 neXtProt:NX_Q9H6Y7 PharmGKB:PA134953711
HOGENOM:HOG000234362 HOVERGEN:HBG063762 InParanoid:Q9H6Y7 KO:K15706
OMA:VCKQRVT OrthoDB:EOG4QJRP0 PhylomeDB:Q9H6Y7 ChiTaRS:RNF167
GenomeRNAi:26001 NextBio:47726 Bgee:Q9H6Y7 CleanEx:HS_RNF167
Genevestigator:Q9H6Y7 GermOnline:ENSG00000108523 Uniprot:Q9H6Y7
Length = 350
Score = 158 (60.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 28/89 (31%), Positives = 50/89 (56%)
Query: 63 RNYDHRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLH 122
R HR+ R+R+ + ++ P + D D CA+CL ++++G+++RVLP C H
Sbjct: 195 RCIQHRKRLQRNRLTKEQLKQI--PTHDYQKGD-QYDVCAICLDEYEDGDKLRVLP-CAH 250
Query: 123 LFHVPCIDMWLS-SHSNCPLCRANANAAP 150
+H C+D WL+ + CP+C+ + P
Sbjct: 251 AYHSRCVDPWLTQTRKTCPICKQPVHRGP 279
Score = 34 (17.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 18 LIGLLGVIAGFMMVATYHCI 37
++GLL + G +M+A CI
Sbjct: 180 IVGLLVLAMGAVMIA--RCI 197
>TAIR|locus:2178788 [details] [associations]
symbol:ATL63 "TOXICOS EN LEVADURA 63" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB020755 EMBL:DQ056726
IPI:IPI00525382 RefSeq:NP_200666.1 UniGene:At.64310
ProteinModelPortal:Q9LUZ9 SMR:Q9LUZ9 STRING:Q9LUZ9
EnsemblPlants:AT5G58580.1 GeneID:835972 KEGG:ath:AT5G58580
TAIR:At5g58580 eggNOG:NOG263539 HOGENOM:HOG000210047
InParanoid:Q9LUZ9 OMA:EVRIEVF PhylomeDB:Q9LUZ9
ProtClustDB:CLSN2914836 Genevestigator:Q9LUZ9 GermOnline:AT5G58580
Uniprot:Q9LUZ9
Length = 308
Score = 171 (65.3 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 37/79 (46%), Positives = 48/79 (60%)
Query: 74 DRIRTSSVMRVLMPVFRFSSKDCNEDT---CAVCLGDFKEGEQVRVLPECLHLFHVPCID 130
D+ SSV+ + P+F + + ED C +CLG ++ G+ R L C H FHV CID
Sbjct: 109 DKGLDSSVISSI-PLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECID 167
Query: 131 MWLSSHSNCPLCRANANAA 149
MWLSSHS CPLCR+ AA
Sbjct: 168 MWLSSHSTCPLCRSPVLAA 186
>TAIR|locus:2207026 [details] [associations]
symbol:AT1G72200 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0006826 "iron
ion transport" evidence=RCA] [GO:0010106 "cellular response to iron
ion starvation" evidence=RCA] [GO:0010167 "response to nitrate"
evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
evidence=RCA] [GO:0015706 "nitrate transport" evidence=RCA]
[GO:0045492 "xylan biosynthetic process" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC067754 EMBL:BT004268
EMBL:BT020487 IPI:IPI00541004 PIR:E96745 RefSeq:NP_177365.1
UniGene:At.35131 ProteinModelPortal:Q84W40 SMR:Q84W40
EnsemblPlants:AT1G72200.1 GeneID:843552 KEGG:ath:AT1G72200
TAIR:At1g72200 eggNOG:NOG238162 HOGENOM:HOG000239182
InParanoid:Q84W40 OMA:TMAILMI PhylomeDB:Q84W40
ProtClustDB:CLSN2679532 Genevestigator:Q84W40 GermOnline:AT1G72200
Uniprot:Q84W40
Length = 404
Score = 174 (66.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPPPHLV-LTLP 159
C+VCL +F++ E +R++P+C H+FH CID WL SH+ CPLCRA+ P +V + +P
Sbjct: 144 CSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIPVPGESIVSIQIP 203
>TAIR|locus:2169399 [details] [associations]
symbol:AT5G07040 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 EMBL:AB010697 IPI:IPI00519834
RefSeq:NP_196321.1 UniGene:At.54759 ProteinModelPortal:Q9FL42
SMR:Q9FL42 EnsemblPlants:AT5G07040.1 GeneID:830595
KEGG:ath:AT5G07040 TAIR:At5g07040 eggNOG:NOG256909
InParanoid:Q9FL42 OMA:GPCSICL PhylomeDB:Q9FL42
ProtClustDB:CLSN2687033 Genevestigator:Q9FL42 GermOnline:AT5G07040
Uniprot:Q9FL42
Length = 159
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 46/154 (29%), Positives = 69/154 (44%)
Query: 11 GLQFS-PLLIGLLGVIAGFMMVATYHCI-SLGXXXXXXXXXXXXXEPNTRQDTERNYDHR 68
GL + + + +L V+ F+M+A+Y CI S P+ + + D
Sbjct: 12 GLGYGIAIAVSIL-VLISFIMLASYICIRSKSTGRDEATSDVVLDLPSPAAEVKLGLDRP 70
Query: 69 --QEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
+ +PR I R+ P N C++CL D++ E VR +PEC H FH
Sbjct: 71 VIESYPR--IVLGDSRRLPRP---------NNGPCSICLCDYEAREPVRCIPECNHCFHT 119
Query: 127 PCIDMWLSSHSNCPLCRANANAAPPPHLVLTLPD 160
C+D WL + + CPLCR N+ P L L D
Sbjct: 120 DCVDEWLRTSATCPLCR---NSPAPSRLATPLSD 150
>TAIR|locus:2830088 [details] [associations]
symbol:AT3G18773 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
eggNOG:COG5540 HOGENOM:HOG000237642 ProtClustDB:CLSN2682468
EMBL:AK222192 EMBL:BT025292 EMBL:AY086917 IPI:IPI00522673
RefSeq:NP_850610.1 UniGene:At.47029 ProteinModelPortal:Q9LS99
SMR:Q9LS99 EnsemblPlants:AT3G18773.1 GeneID:821409
KEGG:ath:AT3G18773 TAIR:At3g18773 InParanoid:Q9LS99 OMA:NYSPEIN
PhylomeDB:Q9LS99 Genevestigator:Q9LS99 Uniprot:Q9LS99
Length = 220
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 72 PRDRIRTSSVMRV---LMPVFRFSSK----DCNEDTCAVCLGDFKEGEQVRVLPECLHLF 124
PRD + + ++PV +S + E+ C +CL DF GEQ+RVLP+C H F
Sbjct: 95 PRDSSVNKGIKKKALKMLPVVNYSPEINLPGVGEE-CVICLSDFVAGEQLRVLPKCNHGF 153
Query: 125 HVPCIDMWLSSHSNCPLCR 143
H+ CID WL+ H CP CR
Sbjct: 154 HLRCIDKWLTQHMTCPKCR 172
>TAIR|locus:2128303 [details] [associations]
symbol:RHA1A "RING-H2 finger A1A" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009693 "ethylene biosynthetic process"
evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL096882 EMBL:AL161531 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AF078683
EMBL:AY086119 IPI:IPI00533363 PIR:T13028 PIR:T51840
RefSeq:NP_192876.1 UniGene:At.24904 ProteinModelPortal:Q9SUS4
SMR:Q9SUS4 STRING:Q9SUS4 PRIDE:Q9SUS4 EnsemblPlants:AT4G11370.1
GeneID:826739 KEGG:ath:AT4G11370 GeneFarm:4090 TAIR:At4g11370
eggNOG:NOG278665 HOGENOM:HOG000239353 InParanoid:Q9SUS4 KO:K16281
OMA:FFRDIVD PhylomeDB:Q9SUS4 ProtClustDB:CLSN2685308
Genevestigator:Q9SUS4 Uniprot:Q9SUS4
Length = 159
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 36/89 (40%), Positives = 52/89 (58%)
Query: 63 RNYDHRQ----EWPRDRIRTS-SVMRVLMPVFRFSSKDCN-EDTCAVCLGDFKEGEQVRV 116
R DH + + R + TS S+ L+PV RFS + ED C VCL DF+ ++VR
Sbjct: 42 RFLDHNETSAPDLTRHALSTSASLANELIPVVRFSDLPTDPEDCCTVCLSDFESDDKVRQ 101
Query: 117 LPECLHLFHVPCIDMWLSSHSN--CPLCR 143
LP+C H+FH C+D W+ ++ CP+CR
Sbjct: 102 LPKCGHVFHHYCLDRWIVDYNKMKCPVCR 130
>TAIR|locus:2054049 [details] [associations]
symbol:MEE16 "maternal effect embryo arrest 16"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0009793 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000239562 ProtClustDB:CLSN2683052 EMBL:AC005724
IPI:IPI00529404 PIR:H84566 RefSeq:NP_179455.1 UniGene:At.66220
ProteinModelPortal:Q9ZV53 SMR:Q9ZV53 EnsemblPlants:AT2G18650.1
GeneID:816380 KEGG:ath:AT2G18650 TAIR:At2g18650 eggNOG:NOG280728
InParanoid:Q9ZV53 OMA:KSVVERE PhylomeDB:Q9ZV53
Genevestigator:Q9ZV53 GermOnline:AT2G18650 Uniprot:Q9ZV53
Length = 423
Score = 174 (66.3 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 31/63 (49%), Positives = 42/63 (66%)
Query: 86 MPVFRFSS---KDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLC 142
+PVF + S + C VCL +F+ +++R+LP+C H FHV CID WL SHS CPLC
Sbjct: 108 LPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDTWLLSHSTCPLC 167
Query: 143 RAN 145
R+N
Sbjct: 168 RSN 170
>TAIR|locus:2123558 [details] [associations]
symbol:AT4G28890 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0000041 "transition
metal ion transport" evidence=RCA] [GO:0048527 "lateral root
development" evidence=RCA] [GO:0048589 "developmental growth"
evidence=RCA] [GO:0048765 "root hair cell differentiation"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL161573
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
HOGENOM:HOG000034165 ProtClustDB:CLSN2683296 EMBL:DQ059125
EMBL:AL078469 EMBL:BX828195 EMBL:BT015731 EMBL:BT020178
IPI:IPI00531964 PIR:T08944 RefSeq:NP_194618.3 UniGene:At.28216
ProteinModelPortal:Q5XF85 SMR:Q5XF85 EnsemblPlants:AT4G28890.1
GeneID:829010 KEGG:ath:AT4G28890 TAIR:At4g28890 InParanoid:Q5XF85
OMA:SEIREDS PhylomeDB:Q5XF85 Genevestigator:Q5XF85 Uniprot:Q5XF85
Length = 432
Score = 174 (66.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 30/60 (50%), Positives = 41/60 (68%)
Query: 86 MPVFRFSS-KDCNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P+FRFS+ K + C+VCL F+ E +R+LP+C H FH+ CID WL H+ CPLCR
Sbjct: 106 LPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWLEQHATCPLCR 165
>TAIR|locus:2199902 [details] [associations]
symbol:AT1G23980 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC002423
HOGENOM:HOG000239562 EMBL:AK119101 EMBL:BT010323 IPI:IPI00526690
RefSeq:NP_173809.1 UniGene:At.41503 UniGene:At.65734
ProteinModelPortal:Q8GW38 SMR:Q8GW38 EnsemblPlants:AT1G23980.1
GeneID:839010 KEGG:ath:AT1G23980 TAIR:At1g23980 eggNOG:NOG265447
InParanoid:Q8GW38 OMA:MEGKRIC PhylomeDB:Q8GW38
ProtClustDB:CLSN2914164 Genevestigator:Q8GW38 GermOnline:AT1G23980
Uniprot:Q8GW38
Length = 369
Score = 172 (65.6 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 86 MPVFRFSS-KDCNED-TCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+PVF + K E CAVCL +F E +++R+LP C H FH+ CID WL S+S CPLCR
Sbjct: 127 LPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186
>UNIPROTKB|E2R9W3 [details] [associations]
symbol:RNF43 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063291 EMBL:AAEX03006574
Ensembl:ENSCAFT00000027763 Uniprot:E2R9W3
Length = 781
Score = 161 (61.7 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 92 SSKDCNE-DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
SS CN CA+CL +F EG+++R++ CLH FH C+D WL H CPLC N
Sbjct: 262 SSSSCNSAPVCAICLEEFSEGQELRII-SCLHEFHRVCVDPWLHQHRTCPLCMFN 315
Score = 41 (19.5 bits), Expect = 1.8e-12, Sum P(2) = 1.8e-12
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 143 RANANAAPPPHLVLTLPDSGGAPQPEFHRAP 173
R+ + P P LT + G AP+ HR P
Sbjct: 363 RSTVSRPPRPGPFLTSQEPGTAPR--HHRLP 391
>TAIR|locus:2122348 [details] [associations]
symbol:AT4G09100 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC005359 HOGENOM:HOG000237642 EMBL:AL161514 EMBL:DQ059117
EMBL:BT024815 IPI:IPI00531797 PIR:B85092 RefSeq:NP_192649.1
UniGene:At.54223 ProteinModelPortal:Q9M0R7 SMR:Q9M0R7
EnsemblPlants:AT4G09100.1 GeneID:826488 KEGG:ath:AT4G09100
TAIR:At4g09100 eggNOG:NOG246260 InParanoid:Q9M0R7 OMA:IGELECV
PhylomeDB:Q9M0R7 ProtClustDB:CLSN2915828 Genevestigator:Q9M0R7
GermOnline:AT4G09100 Uniprot:Q9M0R7
Length = 132
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 24/44 (54%), Positives = 34/44 (77%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRA 144
C VCL +FK+ E +R++P C+H+FH C+D+WLS S CP+CRA
Sbjct: 85 CVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPICRA 128
>TAIR|locus:2028411 [details] [associations]
symbol:AT1G49200 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
EMBL:AC016041 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 ProtClustDB:CLSN2682468 eggNOG:NOG265447
EMBL:AY039551 EMBL:AY093753 IPI:IPI00547400 RefSeq:NP_175346.1
UniGene:At.26144 ProteinModelPortal:Q94BY6 SMR:Q94BY6
EnsemblPlants:AT1G49200.1 GeneID:841343 KEGG:ath:AT1G49200
TAIR:At1g49200 InParanoid:Q94BY6 OMA:CAFRRTS PhylomeDB:Q94BY6
Genevestigator:Q94BY6 GermOnline:AT1G49200 Uniprot:Q94BY6
Length = 226
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 26/45 (57%), Positives = 31/45 (68%)
Query: 99 DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+ C +CL DF GEQ+R+LP+C H FHV CID WL H CP CR
Sbjct: 134 EECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCR 178
>TAIR|locus:2028506 [details] [associations]
symbol:AT1G49220 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
EMBL:AC016041 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
EMBL:DQ056489 IPI:IPI00517344 PIR:G96528 RefSeq:NP_175348.1
UniGene:At.52090 ProteinModelPortal:P0C034 SMR:P0C034
EnsemblPlants:AT1G49220.1 GeneID:841345 KEGG:ath:AT1G49220
TAIR:At1g49220 HOGENOM:HOG000237642 InParanoid:P0C034 OMA:VMIAPLE
PhylomeDB:P0C034 ProtClustDB:CLSN2682468 Genevestigator:P0C034
GermOnline:AT1G49220 Uniprot:P0C034
Length = 251
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 26/46 (56%), Positives = 32/46 (69%)
Query: 98 EDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
++ C +CL DF GEQ+R+LP+C H FHV CID WL H CP CR
Sbjct: 132 DEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCR 177
>TAIR|locus:2028436 [details] [associations]
symbol:AT1G49230 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
EMBL:AC016041 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
PIR:G96528 HOGENOM:HOG000237642 ProtClustDB:CLSN2682468
EMBL:BT010489 EMBL:AK176235 EMBL:AK176512 IPI:IPI00522198
RefSeq:NP_175349.1 UniGene:At.43788 ProteinModelPortal:Q6NQG7
SMR:Q6NQG7 EnsemblPlants:AT1G49230.1 GeneID:841346
KEGG:ath:AT1G49230 TAIR:At1g49230 InParanoid:Q6NQG7 OMA:NTGVKRK
PhylomeDB:Q6NQG7 Genevestigator:Q6NQG7 GermOnline:AT1G49230
Uniprot:Q6NQG7
Length = 219
Score = 166 (63.5 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 29/46 (63%), Positives = 35/46 (76%)
Query: 99 DT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
DT CA+CL +F E+V++LP C H FHV CID WLSSHS+CP CR
Sbjct: 128 DTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCR 173
>TAIR|locus:2044742 [details] [associations]
symbol:AT2G34990 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] [GO:0006863 "purine nucleobase
transport" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000239182 EMBL:AC004238 EMBL:DQ056567 IPI:IPI00522479
PIR:T00480 RefSeq:NP_181044.1 UniGene:At.62396
ProteinModelPortal:O64762 SMR:O64762 PRIDE:O64762
EnsemblPlants:AT2G34990.1 GeneID:818063 KEGG:ath:AT2G34990
TAIR:At2g34990 eggNOG:NOG302028 InParanoid:O64762 PhylomeDB:O64762
Genevestigator:O64762 GermOnline:AT2G34990 Uniprot:O64762
Length = 302
Score = 169 (64.5 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 25/50 (50%), Positives = 36/50 (72%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAP 150
CAVC+ +F++ E +R++PEC H+FH C+ +WLS HS CPLCR + P
Sbjct: 96 CAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLCRVDLCLQP 145
>UNIPROTKB|F1P2A5 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 EMBL:AADN02040362 IPI:IPI00820139
Ensembl:ENSGALT00000006632 ArrayExpress:F1P2A5 Uniprot:F1P2A5
Length = 880
Score = 159 (61.0 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 93 SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP 151
+++ E+ C +CL +EGE VR LP C+HLFH C+D WL ++ CP+CR + A P
Sbjct: 820 TEEDTEEKCTICLSILEEGEDVRRLP-CMHLFHQVCVDQWLITNKKCPICRVDIEAQLP 877
Score = 44 (20.5 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 61 TERNYDHR-QEWPRDRIRTSSVMRVLM--PVFRFSS 93
T R + R Q+WPR SV +LM P F SS
Sbjct: 66 TSRTHSARSQKWPRTE--ADSVPGLLMKRPCFHSSS 99
>UNIPROTKB|J9P4S5 [details] [associations]
symbol:RNF43 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063291 OMA:YLLGPSR EMBL:AAEX03006574
Ensembl:ENSCAFT00000043743 Uniprot:J9P4S5
Length = 818
Score = 161 (61.7 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 92 SSKDCNE-DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
SS CN CA+CL +F EG+++R++ CLH FH C+D WL H CPLC N
Sbjct: 300 SSSSCNSAPVCAICLEEFSEGQELRII-SCLHEFHRVCVDPWLHQHRTCPLCMFN 353
Score = 41 (19.5 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 143 RANANAAPPPHLVLTLPDSGGAPQPEFHRAP 173
R+ + P P LT + G AP+ HR P
Sbjct: 401 RSTVSRPPRPGPFLTSQEPGTAPR--HHRLP 429
>UNIPROTKB|E2R7H1 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IEA] [GO:0030511 "positive
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005737 GO:GO:0045893 GO:GO:0043234 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842 GO:GO:0007389
GO:GO:0000209 GO:GO:0030579 CTD:54778 KO:K10635 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 EMBL:AAEX03016176 EMBL:AAEX03016177
EMBL:AAEX03016178 RefSeq:XP_535498.2 ProteinModelPortal:E2R7H1
Ensembl:ENSCAFT00000026314 GeneID:478323 KEGG:cfa:478323
Uniprot:E2R7H1
Length = 985
Score = 159 (61.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 93 SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP 151
+++ E+ C +CL +EGE VR LP C+HLFH C+D WL ++ CP+CR + A P
Sbjct: 925 TEEDTEEKCTICLSILEEGEDVRRLP-CMHLFHQVCVDQWLITNKKCPICRVDIEAQLP 982
Score = 45 (20.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 63 RNYDHR-QEWPRDRIRTSSVMRVLM--PVFRFSS 93
R + R Q+WPR T SV +LM P F SS
Sbjct: 175 RTHSARSQKWPRTE--TESVSGLLMKRPCFHSSS 206
Score = 37 (18.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 64 NYDHRQEWPRDRIRTSSVMRVL 85
++ R + PR+R R S+V++ L
Sbjct: 354 SHTSRPQEPRNRSRISTVIQPL 375
>UNIPROTKB|F1S053 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IEA] [GO:0030511 "positive
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005737 GO:GO:0045893 GO:GO:0043234 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842 GO:GO:0007389
GO:GO:0000209 GO:GO:0030579 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 EMBL:CU582792 EMBL:CU464072
Ensembl:ENSSSCT00000005070 Uniprot:F1S053
Length = 994
Score = 159 (61.0 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 93 SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP 151
+++ E+ C +CL +EGE VR LP C+HLFH C+D WL ++ CP+CR + A P
Sbjct: 934 TEEDTEEKCTICLSILEEGEDVRRLP-CMHLFHQVCVDQWLITNKKCPICRVDIEAQLP 991
Score = 45 (20.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 63 RNYDHR-QEWPRDRIRTSSVMRVLM--PVFRFSS 93
R + R Q+WPR T SV +LM P F SS
Sbjct: 174 RTHSARSQKWPRTE--TESVSGLLMKRPCFHSSS 205
Score = 37 (18.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 64 NYDHRQEWPRDRIRTSSVMRVL 85
++ R + PR+R R S+V++ L
Sbjct: 353 SHTSRPQEPRNRSRISTVIQPL 374
>UNIPROTKB|Q5Z5F2 [details] [associations]
symbol:LOC_Os06g34450 "E3 ubiquitin-protein ligase
Os06g0535400" species:39947 "Oryza sativa Japonica Group"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0046872
EMBL:AP008212 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AP005723 EMBL:AK066960 RefSeq:NP_001057791.1
UniGene:Os.5874 ProteinModelPortal:Q5Z5F2
EnsemblPlants:LOC_Os06g34450.1 GeneID:4341214
KEGG:dosa:Os06t0535400-01 KEGG:osa:4341214 Gramene:Q5Z5F2
eggNOG:NOG282486 OMA:CLAGMRE ProtClustDB:CLSN2696222 Uniprot:Q5Z5F2
Length = 251
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 31/65 (47%), Positives = 37/65 (56%)
Query: 98 EDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPPPHLVLT 157
ED C VCL +E + +R LP C H FH CI WL++H CP+CR A PPP
Sbjct: 182 EDKCCVCLAGMREAQALRDLPRCGHRFHAKCIGKWLTAHPTCPVCRTTA--VPPP---AP 236
Query: 158 LPDSG 162
LP SG
Sbjct: 237 LPASG 241
>TAIR|locus:2053776 [details] [associations]
symbol:AT2G42350 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC005956
EMBL:BT010853 EMBL:BT011323 IPI:IPI00542284 PIR:H84852
RefSeq:NP_181764.1 UniGene:At.42716 ProteinModelPortal:Q9SLC4
SMR:Q9SLC4 EnsemblPlants:AT2G42350.1 GeneID:818836
KEGG:ath:AT2G42350 TAIR:At2g42350 eggNOG:NOG298426
HOGENOM:HOG000034168 InParanoid:Q9SLC4 OMA:VAGTECA PhylomeDB:Q9SLC4
ProtClustDB:CLSN2683918 Genevestigator:Q9SLC4 GermOnline:AT2G42350
Uniprot:Q9SLC4
Length = 217
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 30/73 (41%), Positives = 42/73 (57%)
Query: 80 SVMRVLMPVFRFSSK-DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSN 138
S++ +P F K D CAVCL +E + R+LP C H+FHV C+D WL++ S
Sbjct: 78 SLVIASLPTFVVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQST 137
Query: 139 CPLCRANANAAPP 151
CP+CR A + P
Sbjct: 138 CPVCRTEAEPSHP 150
>TAIR|locus:2118651 [details] [associations]
symbol:AT4G30370 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0010200 "response to chitin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL161576
GO:GO:0016567 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 HOGENOM:HOG000237642 EMBL:AF160182 EMBL:AK118932
EMBL:BT005549 IPI:IPI00529274 PIR:B85355 RefSeq:NP_194766.1
UniGene:At.31839 UniGene:At.69303 UniGene:At.75149
ProteinModelPortal:Q9M0C3 SMR:Q9M0C3 EnsemblPlants:AT4G30370.1
GeneID:829160 KEGG:ath:AT4G30370 TAIR:At4g30370 eggNOG:NOG242482
InParanoid:Q9M0C3 OMA:PPPKANT PhylomeDB:Q9M0C3
ProtClustDB:CLSN2683055 Genevestigator:Q9M0C3 Uniprot:Q9M0C3
Length = 176
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 34/89 (38%), Positives = 48/89 (53%)
Query: 62 ERNYDHRQEWPR-----DRIRTSSVMRVLMPVFRFS--SKDCNEDTCAVCLGDFKEGEQV 114
+RNY HR R D + V R +P F++ S + D C VC+ F++G+
Sbjct: 71 QRNYRHRLRRHRRHEYSDGLSPRCVKR--LPQFKYCEPSSEYGGDDCVVCIDGFRQGQWC 128
Query: 115 RVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
R LP C H+FH C+D+WL S CP+CR
Sbjct: 129 RKLPRCGHVFHRKCVDLWLIKVSTCPICR 157
>TAIR|locus:2118666 [details] [associations]
symbol:AT4G30400 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0080167 "response to karrikin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0080167
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
EMBL:AL161577 EMBL:AF160182 EMBL:AY054187 EMBL:AY103309
IPI:IPI00526302 PIR:E85355 RefSeq:NP_567846.1 UniGene:At.4566
ProteinModelPortal:Q940Q4 SMR:Q940Q4 PRIDE:Q940Q4
EnsemblPlants:AT4G30400.1 GeneID:829163 KEGG:ath:AT4G30400
TAIR:At4g30400 HOGENOM:HOG000239562 InParanoid:Q940Q4 OMA:NVVERES
PhylomeDB:Q940Q4 ProtClustDB:CLSN2683052 Genevestigator:Q940Q4
GermOnline:AT4G30400 Uniprot:Q940Q4
Length = 472
Score = 173 (66.0 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 32/64 (50%), Positives = 45/64 (70%)
Query: 86 MPVFRFSS----KDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPL 141
+PVF + S K+ D CAVCL +F+ +++R+LP+C H FH+ CID WL SHS CPL
Sbjct: 116 LPVFHYKSIIGLKNYPFD-CAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPL 174
Query: 142 CRAN 145
CR++
Sbjct: 175 CRSS 178
>TAIR|locus:2009527 [details] [associations]
symbol:ATL15 "Arabidopsis toxicos en levadura 15"
species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0009416 "response to light stimulus" evidence=IEP] [GO:0033591
"response to L-ascorbic acid" evidence=IEP] [GO:0010167 "response
to nitrate" evidence=RCA] [GO:0015706 "nitrate transport"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0033591 GO:GO:0046872
GO:GO:0008270 GO:GO:0009416 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC006551 GO:GO:0004842 HOGENOM:HOG000239182
ProtClustDB:CLSN2679532 EMBL:DQ059099 EMBL:BT011235 EMBL:BT012542
EMBL:AK226235 IPI:IPI00544414 PIR:C86358 RefSeq:NP_173666.1
UniGene:At.19245 UniGene:At.63975 UniGene:At.68564
ProteinModelPortal:Q9SK92 SMR:Q9SK92 PRIDE:Q9SK92
EnsemblPlants:AT1G22500.1 GeneID:838856 KEGG:ath:AT1G22500
TAIR:At1g22500 eggNOG:NOG330336 InParanoid:Q9SK92 OMA:HTRSIQS
PhylomeDB:Q9SK92 Genevestigator:Q9SK92 Uniprot:Q9SK92
Length = 381
Score = 171 (65.3 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 38/106 (35%), Positives = 54/106 (50%)
Query: 56 NTRQDTERNYDHR--QEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQ 113
N RQ TE D + +P T +R+ K+ E C VCL +F++ E
Sbjct: 81 NVRQTTEPGLDASVIETFPTFPYSTVKTLRI--------GKEALE--CPVCLNEFEDDET 130
Query: 114 VRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPPPHLVLTLP 159
+R++P+C H+FH CID WL S + CPLCRAN P + +P
Sbjct: 131 LRLIPQCCHVFHPGCIDAWLRSQTTCPLCRANLVPVPGESVSSEIP 176
>UNIPROTKB|E1BSQ8 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007389 "pattern specification process" evidence=IEA]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0005737 GO:GO:0045893 GO:GO:0043234
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0030511
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842
GO:GO:0000209 GO:GO:0030579 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 EMBL:AADN02040362 IPI:IPI00592682
ProteinModelPortal:E1BSQ8 Ensembl:ENSGALT00000034463
ArrayExpress:E1BSQ8 Uniprot:E1BSQ8
Length = 976
Score = 159 (61.0 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 93 SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP 151
+++ E+ C +CL +EGE VR LP C+HLFH C+D WL ++ CP+CR + A P
Sbjct: 916 TEEDTEEKCTICLSILEEGEDVRRLP-CMHLFHQVCVDQWLITNKKCPICRVDIEAQLP 973
Score = 44 (20.5 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 15/36 (41%), Positives = 18/36 (50%)
Query: 61 TERNYDHR-QEWPRDRIRTSSVMRVLM--PVFRFSS 93
T R + R Q+WPR SV +LM P F SS
Sbjct: 155 TSRTHSARSQKWPRTE--ADSVPGLLMKRPCFHSSS 188
>TAIR|locus:2206722 [details] [associations]
symbol:AT1G35330 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC069160 HOGENOM:HOG000239182 IPI:IPI00547066 PIR:D86474
RefSeq:NP_174766.1 UniGene:At.51949 ProteinModelPortal:Q9C7I1
SMR:Q9C7I1 EnsemblPlants:AT1G35330.1 GeneID:840422
KEGG:ath:AT1G35330 TAIR:At1g35330 eggNOG:NOG282652
InParanoid:Q9C7I1 OMA:SNWRITE PhylomeDB:Q9C7I1
ProtClustDB:CLSN2914356 Genevestigator:Q9C7I1 GermOnline:AT1G35330
Uniprot:Q9C7I1
Length = 327
Score = 169 (64.5 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAP 150
CA+CL +F++ E +R++P C H FH CID+WLSS S CP+CRA+ P
Sbjct: 128 CAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPKP 177
>TAIR|locus:2028406 [details] [associations]
symbol:AT1G49210 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC016041
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
HOGENOM:HOG000237642 ProtClustDB:CLSN2682468 EMBL:DQ086858
EMBL:BT010932 EMBL:BT011647 IPI:IPI00546374 RefSeq:NP_175347.1
UniGene:At.38277 ProteinModelPortal:Q6NML0 SMR:Q6NML0
EnsemblPlants:AT1G49210.1 GeneID:841344 KEGG:ath:AT1G49210
TAIR:At1g49210 InParanoid:Q6NML0 OMA:CAFRRSS PhylomeDB:Q6NML0
Genevestigator:Q6NML0 GermOnline:AT1G49210 Uniprot:Q6NML0
Length = 225
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 85 LMPVFRFSSKDCN----EDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCP 140
+ PV +S ++ N + C +CL DF GEQ+R+LP+C H FHV CID WL H CP
Sbjct: 116 MFPVVSYS-REMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCP 174
Query: 141 LCR 143
CR
Sbjct: 175 KCR 177
>TAIR|locus:2122358 [details] [associations]
symbol:AT4G09110 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010043
"response to zinc ion" evidence=RCA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC005359
HOGENOM:HOG000239182 EMBL:AL161514 IPI:IPI00529690 PIR:C85092
RefSeq:NP_192650.1 UniGene:At.54224 ProteinModelPortal:Q9M0R6
SMR:Q9M0R6 PaxDb:Q9M0R6 PRIDE:Q9M0R6 EnsemblPlants:AT4G09110.1
GeneID:826489 KEGG:ath:AT4G09110 TAIR:At4g09110 eggNOG:KOG0800
InParanoid:Q9M0R6 OMA:CQQESES PhylomeDB:Q9M0R6
ProtClustDB:CLSN2685392 Genevestigator:Q9M0R6 GermOnline:AT4G09110
Uniprot:Q9M0R6
Length = 302
Score = 167 (63.8 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAP 150
CA+CL +F + E +R +P C H FH CID+WLSS S CP CRAN + P
Sbjct: 123 CAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACRANLSLKP 172
>TAIR|locus:4010713708 [details] [associations]
symbol:AT2G44578 "AT2G44578" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC003672
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG282867
IPI:IPI00846938 RefSeq:NP_001078058.1 UniGene:At.36739
UniGene:At.75339 ProteinModelPortal:A8MS73 SMR:A8MS73
EnsemblPlants:AT2G44578.1 GeneID:5007961 KEGG:ath:AT2G44578
TAIR:At2g44578 HOGENOM:HOG000015208 OMA:AEGEKMR PhylomeDB:A8MS73
ProtClustDB:CLSN2681377 Genevestigator:A8MS73 Uniprot:A8MS73
Length = 145
Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 30/61 (49%), Positives = 36/61 (59%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP--PHLVLTL 158
C +CL D EGE++R + C H FHV CID WL S CPLCRA PP P + L +
Sbjct: 70 CTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIPPVPPGNPLVALFV 129
Query: 159 P 159
P
Sbjct: 130 P 130
>TAIR|locus:2178515 [details] [associations]
symbol:AT5G46650 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB016882
HOGENOM:HOG000034167 ProtClustDB:CLSN2916158 IPI:IPI00527161
RefSeq:NP_199477.1 UniGene:At.55407 ProteinModelPortal:Q9FIR0
SMR:Q9FIR0 EnsemblPlants:AT5G46650.1 GeneID:834708
KEGG:ath:AT5G46650 TAIR:At5g46650 eggNOG:NOG324377
InParanoid:Q9FIR0 OMA:EEDRYTL PhylomeDB:Q9FIR0
Genevestigator:Q9FIR0 Uniprot:Q9FIR0
Length = 289
Score = 165 (63.1 bits), Expect = 4.7e-12, P = 4.7e-12
Identities = 33/74 (44%), Positives = 45/74 (60%)
Query: 87 PVFRFSS-KDCNEDT----CAVCLGDFKEGE-QVRVLPECLHLFHVPCIDMWLSSHSNCP 140
P+F FSS KD ED CA+CL +F+E +R+L C H+FH CID WL S+ CP
Sbjct: 95 PLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLESNKTCP 154
Query: 141 LCRANANAAPPPHL 154
+CR N + P ++
Sbjct: 155 VCRRNLDPNAPENI 168
>TAIR|locus:2146330 [details] [associations]
symbol:CNI1 "carbon/nitrogen insensitive 1" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016020
"membrane" evidence=IDA] [GO:0043562 "cellular response to nitrogen
levels" evidence=IMP] [GO:0009814 "defense response, incompatible
interaction" evidence=IEP] [GO:0009816 "defense response to
bacterium, incompatible interaction" evidence=IMP] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0007165 "signal transduction" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=RCA] [GO:0009611 "response
to wounding" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0009737 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0016020 GO:GO:0046872 GO:GO:0008270 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009816 GO:GO:0043562
eggNOG:COG5540 GO:GO:0004842 HOGENOM:HOG000239182 EMBL:AC007123
EMBL:AK226995 EMBL:AY084377 IPI:IPI00545224 RefSeq:NP_198094.1
UniGene:At.30807 ProteinModelPortal:Q8LGA5 SMR:Q8LGA5 STRING:Q8LGA5
EnsemblPlants:AT5G27420.1 GeneID:832801 KEGG:ath:AT5G27420
TAIR:At5g27420 InParanoid:Q8LGA5 OMA:PSFLWRN PhylomeDB:Q8LGA5
ProtClustDB:CLSN2687102 Genevestigator:Q8LGA5 GermOnline:AT5G27420
Uniprot:Q8LGA5
Length = 368
Score = 168 (64.2 bits), Expect = 4.9e-12, P = 4.9e-12
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN-ANAAPPPHLVL 156
CA+CL +F++ E +R+LP+C H+FH CI WL H CP+CR N A P P +V+
Sbjct: 124 CAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNLAEQTPEPEVVV 180
>TAIR|locus:2082762 [details] [associations]
symbol:AT3G61550 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132962 GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 ProtClustDB:CLSN2683451 EMBL:AF428280
EMBL:AY116968 EMBL:AK221661 IPI:IPI00532044 PIR:T47947
RefSeq:NP_191714.1 UniGene:At.948 ProteinModelPortal:Q9M313
SMR:Q9M313 EnsemblPlants:AT3G61550.1 GeneID:825328
KEGG:ath:AT3G61550 TAIR:At3g61550 eggNOG:NOG252222
InParanoid:Q9M313 OMA:CEYMEEE PhylomeDB:Q9M313
Genevestigator:Q9M313 GermOnline:AT3G61550 Uniprot:Q9M313
Length = 212
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 91 FSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAP 150
F + E TC++CL ++ E E +R++PEC H FHV C+D WL + +CP+CR N+
Sbjct: 126 FHDGEGRETTCSICLCEYMEEEMLRMMPECKHYFHVYCLDAWLKLNGSCPVCR-NSPLPT 184
Query: 151 PPHLVLTLPDSGGAPQPEF 169
P + P S P ++
Sbjct: 185 PQSTPQSTPLSEVVPLSQY 203
>TAIR|locus:2144088 [details] [associations]
symbol:AT5G06490 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
EMBL:AP002543 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 IPI:IPI00540295 RefSeq:NP_196267.1
UniGene:At.65493 ProteinModelPortal:Q9FG21 SMR:Q9FG21
EnsemblPlants:AT5G06490.1 GeneID:830537 KEGG:ath:AT5G06490
TAIR:At5g06490 eggNOG:NOG316846 InParanoid:Q9FG21 OMA:CTRSHIS
PhylomeDB:Q9FG21 ProtClustDB:CLSN2916514 Genevestigator:Q9FG21
GermOnline:AT5G06490 Uniprot:Q9FG21
Length = 197
Score = 162 (62.1 bits), Expect = 5.0e-12, P = 5.0e-12
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAP 150
C++CL D+K+ + +RVLP+C HLFH C+D WL H CP+CR + +P
Sbjct: 129 CSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSP 178
>UNIPROTKB|A6QLE0 [details] [associations]
symbol:RNF111 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IEA] [GO:0030511 "positive
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005737 GO:GO:0045893 GO:GO:0043234 GO:GO:0005730
GO:GO:0046872 GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0004842 GO:GO:0007389
GO:GO:0000209 GO:GO:0030579 CTD:54778 eggNOG:NOG291583
HOVERGEN:HBG093884 KO:K10635 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 HOGENOM:HOG000154152 OrthoDB:EOG4MSCXR
EMBL:DAAA02028816 EMBL:DAAA02028817 EMBL:DAAA02028818 EMBL:BC147931
IPI:IPI00867083 RefSeq:NP_001095709.1 UniGene:Bt.48619
STRING:A6QLE0 Ensembl:ENSBTAT00000018858 GeneID:540353
KEGG:bta:540353 InParanoid:A6QLE0 NextBio:20878580 Uniprot:A6QLE0
Length = 994
Score = 159 (61.0 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 93 SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP 151
+++ E+ C +CL +EGE VR LP C+HLFH C+D WL ++ CP+CR + A P
Sbjct: 934 TEEDTEEKCTICLSILEEGEDVRRLP-CMHLFHQVCVDQWLITNKKCPICRVDIEAQLP 991
Score = 41 (19.5 bits), Expect = 5.6e-12, Sum P(2) = 5.6e-12
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 63 RNYDHRQ-EWPRDRIRTSSVMRVLM--PVFRFSS 93
R + R +WPR T SV +LM P F SS
Sbjct: 175 RTHSSRSHKWPRTE--TESVSGLLMKRPCFHSSS 206
Score = 36 (17.7 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 8/22 (36%), Positives = 15/22 (68%)
Query: 64 NYDHRQEWPRDRIRTSSVMRVL 85
++ R + PR+R R S+V++ L
Sbjct: 354 SHTSRPQEPRNRNRMSTVIQPL 375
>TAIR|locus:2034210 [details] [associations]
symbol:AT1G80400 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AC018848 eggNOG:NOG273848 HOGENOM:HOG000239557
ProtClustDB:CLSN2691130 EMBL:AY062845 EMBL:BT000070 EMBL:AK317002
IPI:IPI00535746 PIR:G96835 RefSeq:NP_178156.1 UniGene:At.19651
UniGene:At.48403 ProteinModelPortal:Q9C965 SMR:Q9C965
EnsemblPlants:AT1G80400.1 GeneID:844380 KEGG:ath:AT1G80400
TAIR:At1g80400 InParanoid:Q9C965 OMA:ELPCTHF PhylomeDB:Q9C965
ArrayExpress:Q9C965 Genevestigator:Q9C965 Uniprot:Q9C965
Length = 407
Score = 141 (54.7 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 98 ED-TCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
ED +C +CL + + EQVR LP C H+FHV C+D WL ++ CPLC+
Sbjct: 351 EDASCCICLTRYGDDEQVRELP-CSHVFHVDCVDKWLKINATCPLCK 396
Score = 48 (22.0 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 68 RQEWPRDRIRTSSVMRVLMPVFRFSSKDCNE 98
R+ + + R T+ + L PV+RF SK N+
Sbjct: 297 RENFSQTRGATAEAINAL-PVYRFKSKSRND 326
>TAIR|locus:2172550 [details] [associations]
symbol:AT5G57750 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG302028 EMBL:AB018118
IPI:IPI00528139 RefSeq:NP_200583.1 UniGene:At.55607
ProteinModelPortal:Q9FHG8 SMR:Q9FHG8 EnsemblPlants:AT5G57750.1
GeneID:835883 KEGG:ath:AT5G57750 TAIR:At5g57750
HOGENOM:HOG000199755 InParanoid:Q9FHG8 PhylomeDB:Q9FHG8
Genevestigator:Q9FHG8 Uniprot:Q9FHG8
Length = 210
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
CAVCL +F +++R+LP+C H FHV CID WL ++S CPLCR N
Sbjct: 122 CAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDN 166
>TAIR|locus:2096309 [details] [associations]
symbol:ATL6 "Arabidopsis toxicos en levadura 6"
species:3702 "Arabidopsis thaliana" [GO:0005576 "extracellular
region" evidence=ISM] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0010200 "response to
chitin" evidence=IEP;RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=IEP] [GO:0009816 "defense
response to bacterium, incompatible interaction" evidence=IMP]
[GO:0002679 "respiratory burst involved in defense response"
evidence=RCA] [GO:0035556 "intracellular signal transduction"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
GO:GO:0005886 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0009816 eggNOG:COG5540 GO:GO:0004842 HOGENOM:HOG000239182
ProtClustDB:CLSN2687102 EMBL:AF132016 EMBL:DQ086860 EMBL:AC009177
EMBL:AY080617 IPI:IPI00538071 RefSeq:NP_566249.1 UniGene:At.22987
ProteinModelPortal:Q8RXX9 SMR:Q8RXX9 STRING:Q8RXX9 PRIDE:Q8RXX9
EnsemblPlants:AT3G05200.1 GeneID:819684 KEGG:ath:AT3G05200
GeneFarm:4974 TAIR:At3g05200 InParanoid:Q8RXX9 OMA:IYVRHCY
PhylomeDB:Q8RXX9 Genevestigator:Q8RXX9 GermOnline:AT3G05200
Uniprot:Q8RXX9
Length = 398
Score = 167 (63.8 bits), Expect = 7.6e-12, P = 7.6e-12
Identities = 25/45 (55%), Positives = 35/45 (77%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
CA+CL +F++ E +R+LP+C H+FH CID WL +H CP+CRAN
Sbjct: 128 CAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRAN 172
>TAIR|locus:2040085 [details] [associations]
symbol:AT2G25410 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
HOGENOM:HOG000006156 EMBL:AC006300 EMBL:AY461616 IPI:IPI00526806
PIR:A84648 RefSeq:NP_565593.1 UniGene:At.39022 UniGene:At.68830
ProteinModelPortal:Q9SKK8 SMR:Q9SKK8 EnsemblPlants:AT2G25410.1
GeneID:817079 KEGG:ath:AT2G25410 TAIR:At2g25410 eggNOG:NOG260672
InParanoid:Q9SKK8 OMA:CERRTNS PhylomeDB:Q9SKK8
ProtClustDB:CLSN2917136 Genevestigator:Q9SKK8 Uniprot:Q9SKK8
Length = 377
Score = 166 (63.5 bits), Expect = 8.6e-12, P = 8.6e-12
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 97 NEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
N+ C +CL ++ E VR LPEC H FH CID WL HS+CP+CR+N
Sbjct: 323 NDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCRSN 371
>TAIR|locus:2128293 [details] [associations]
symbol:RHA1B "RING-H2 finger A1B" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0046686
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL096882 EMBL:AL161531
GO:GO:0046872 GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 HOGENOM:HOG000239353 KO:K16281
ProtClustDB:CLSN2685308 EMBL:AF078821 EMBL:DQ059119 EMBL:AY065243
EMBL:AY117300 EMBL:AY087618 IPI:IPI00538423 PIR:T13027 PIR:T51841
RefSeq:NP_192875.1 UniGene:At.20976 ProteinModelPortal:Q9SUS5
SMR:Q9SUS5 STRING:Q9SUS5 EnsemblPlants:AT4G11360.1 GeneID:826738
KEGG:ath:AT4G11360 GeneFarm:4091 TAIR:At4g11360 eggNOG:NOG268018
InParanoid:Q9SUS5 OMA:DWFRDEV PhylomeDB:Q9SUS5
Genevestigator:Q9SUS5 Uniprot:Q9SUS5
Length = 157
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 33/86 (38%), Positives = 49/86 (56%)
Query: 62 ERNYDHRQEWPRDRIRTSSVM-RVLMPVFRFSSKDCN-EDTCAVCLGDFKEGEQVRVLPE 119
+ N R + R + TS+ + L+PV RFS + ED C VCL DF +++R LP+
Sbjct: 44 DHNETSRSDPTRLALSTSATLANELIPVVRFSDLLTDPEDCCTVCLSDFVSDDKIRQLPK 103
Query: 120 CLHLFHVPCIDMWL--SSHSNCPLCR 143
C H+FH C+D W+ + CP+CR
Sbjct: 104 CGHVFHHRCLDRWIVDCNKITCPICR 129
>TAIR|locus:2169063 [details] [associations]
symbol:AT5G47610 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 EMBL:AB025628 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000237642 EMBL:AK175469 EMBL:AK176643 EMBL:AY085503
IPI:IPI00529585 RefSeq:NP_199572.1 UniGene:At.29885
ProteinModelPortal:Q9FGJ6 SMR:Q9FGJ6 EnsemblPlants:AT5G47610.1
GeneID:834811 KEGG:ath:AT5G47610 TAIR:At5g47610 eggNOG:NOG304426
InParanoid:Q9FGJ6 OMA:VISALIC PhylomeDB:Q9FGJ6
ProtClustDB:CLSN2714317 Genevestigator:Q9FGJ6 GermOnline:AT5G47610
Uniprot:Q9FGJ6
Length = 166
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 98 EDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
E CA+CL +F++GE ++VL +C H FHV CI WLS+ S+CP CR +
Sbjct: 104 EAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTS 151
>TAIR|locus:2122378 [details] [associations]
symbol:AT4G09130 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC005359 HOGENOM:HOG000239182 EMBL:AL161514
ProtClustDB:CLSN2685392 IPI:IPI00538403 PIR:E85092
RefSeq:NP_192652.1 UniGene:At.54226 ProteinModelPortal:Q9M0R4
SMR:Q9M0R4 EnsemblPlants:AT4G09130.1 GeneID:826491
KEGG:ath:AT4G09130 TAIR:At4g09130 eggNOG:NOG245216
InParanoid:Q9M0R4 OMA:HIALPRA PhylomeDB:Q9M0R4
Genevestigator:Q9M0R4 GermOnline:AT4G09130 Uniprot:Q9M0R4
Length = 357
Score = 164 (62.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP---PHLVLT 157
CA+CL +F++ E +R +P C H FH CID WLSS S CP+CRAN + PH +
Sbjct: 120 CAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANLSLKSGDSFPHPSMD 179
Query: 158 LPDSGGAPQPEFHRAPD 174
+ ++G A Q +PD
Sbjct: 180 V-ETGNA-QRGVQESPD 194
>UNIPROTKB|C9IY58 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000234362 EMBL:AC069216 EMBL:AC117395
HGNC:HGNC:10057 ChiTaRS:RNF13 IPI:IPI00946275
ProteinModelPortal:C9IY58 SMR:C9IY58 STRING:C9IY58
Ensembl:ENST00000482083 ArrayExpress:C9IY58 Bgee:C9IY58
Uniprot:C9IY58
Length = 232
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 67 HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
HR R+R+R + + +PV +F D D CA+CL ++++G+++R+LP C H +H
Sbjct: 92 HRAR--RNRLRKDQLKK--LPVHKFKKGD-EYDVCAICLDEYEDGDKLRILP-CSHAYHC 145
Query: 127 PCIDMWLS-SHSNCPLCR 143
C+D WL+ + CP+C+
Sbjct: 146 KCVDPWLTKTKKTCPVCK 163
>UNIPROTKB|C9JCY0 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HOGENOM:HOG000234362 EMBL:AC069216 EMBL:AC117395
HGNC:HGNC:10057 ChiTaRS:RNF13 IPI:IPI00976014
ProteinModelPortal:C9JCY0 SMR:C9JCY0 STRING:C9JCY0
Ensembl:ENST00000491086 ArrayExpress:C9JCY0 Bgee:C9JCY0
Uniprot:C9JCY0
Length = 233
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 67 HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
HR R+R+R + + +PV +F D D CA+CL ++++G+++R+LP C H +H
Sbjct: 92 HRAR--RNRLRKDQLKK--LPVHKFKKGD-EYDVCAICLDEYEDGDKLRILP-CSHAYHC 145
Query: 127 PCIDMWLS-SHSNCPLCR 143
C+D WL+ + CP+C+
Sbjct: 146 KCVDPWLTKTKKTCPVCK 163
>UNIPROTKB|K7GLM9 [details] [associations]
symbol:LOC100519887 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104211
EMBL:CU639394 Ensembl:ENSSSCT00000035144 Uniprot:K7GLM9
Length = 238
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
D + D CAVC+ +K+ + VR+LP C H+FH C+D WLS H CP+C+ N
Sbjct: 112 DPDFDHCAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCKLN 161
>TAIR|locus:2053994 [details] [associations]
symbol:AT2G18670 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
HOGENOM:HOG000237642 ProtClustDB:CLSN2683055 EMBL:AC005724
EMBL:DQ059107 EMBL:AY052699 EMBL:AY098955 EMBL:AY088712
IPI:IPI00522502 PIR:B84567 RefSeq:NP_179457.1 UniGene:At.13211
UniGene:At.69600 UniGene:At.73918 ProteinModelPortal:Q9ZV51
SMR:Q9ZV51 EnsemblPlants:AT2G18670.1 GeneID:816382
KEGG:ath:AT2G18670 TAIR:At2g18670 eggNOG:NOG270264
InParanoid:Q9ZV51 OMA:YRISGEP PhylomeDB:Q9ZV51
Genevestigator:Q9ZV51 Uniprot:Q9ZV51
Length = 181
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 34/90 (37%), Positives = 46/90 (51%)
Query: 58 RQDTERNYDHRQEWPRDRIRTSSVMRVLMPVFRFSSKDCN---EDTCAVCLGDFKEGEQV 114
R R + RQE D + + V + +P F+FS E C VC F++G+
Sbjct: 67 RHHRRRRRNRRQE-SSDGLSSRFVKK--LPQFKFSEPSTYTRYESDCVVCFDGFRQGQWC 123
Query: 115 RVLPECLHLFHVPCIDMWLSSHSNCPLCRA 144
R LP C H+FH C+D WL S CP+CRA
Sbjct: 124 RNLPGCGHVFHRKCVDTWLLKASTCPICRA 153
>ZFIN|ZDB-GENE-040426-772 [details] [associations]
symbol:rnf13 "ring finger protein 13" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 ZFIN:ZDB-GENE-040426-772 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 HOVERGEN:HBG063762
CTD:11342 KO:K15692 EMBL:BC044449 IPI:IPI00771289
RefSeq:NP_957338.1 UniGene:Dr.80141 ProteinModelPortal:Q803J9
GeneID:793981 KEGG:dre:793981 InParanoid:Q803J9 NextBio:20931664
ArrayExpress:Q803J9 Uniprot:Q803J9
Length = 377
Score = 164 (62.8 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 67 HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
HR R R+R + + +P+ +F D + D CA+CL +++EGE++RVLP C H +H
Sbjct: 211 HRAR--RSRLRKDQLKK--LPIHKFKKGD-SYDVCAICLDEYEEGERLRVLP-CSHAYHC 264
Query: 127 PCIDMWLS-SHSNCPLCR 143
C+D WL+ + CP+C+
Sbjct: 265 KCVDPWLTKTKKTCPVCK 282
>UNIPROTKB|Q5R476 [details] [associations]
symbol:RNF111 "E3 ubiquitin-protein ligase Arkadia"
species:9601 "Pongo abelii" [GO:0032184 "SUMO polymer binding"
evidence=ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0007275
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 GO:GO:0032184 CTD:54778 HOVERGEN:HBG093884 KO:K10635
EMBL:CR861381 RefSeq:NP_001124565.1 UniGene:Pab.18469
ProteinModelPortal:Q5R476 GeneID:100169738 KEGG:pon:100169738
InParanoid:Q5R476 Uniprot:Q5R476
Length = 986
Score = 159 (61.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 93 SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP 151
+++ E+ C +CL +EGE VR LP C+HLFH C+D WL ++ CP+CR + A P
Sbjct: 926 TEEDTEEKCTICLSILEEGEDVRRLP-CMHLFHQVCVDQWLITNKKCPICRVDIEAQLP 983
Score = 36 (17.7 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 68 RQEWPRDRIRTSSVMRVL 85
R + PR+R R S+V++ L
Sbjct: 358 RPQEPRNRSRISTVIQPL 375
Score = 34 (17.0 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 63 RNYDHRQ-EWPRDRIRTSSVMRVLM 86
R++ R +WPR T SV +LM
Sbjct: 175 RSHSARSHKWPRTE--TESVSGLLM 197
>RGD|1310097 [details] [associations]
symbol:Rnf111 "ring finger protein 111" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0007389 "pattern specification process"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA;ISO] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA;ISO] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA;ISO] [GO:0032184 "SUMO polymer
binding" evidence=ISO] [GO:0043234 "protein complex"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0046332 "SMAD
binding" evidence=IPI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 RGD:1310097 GO:GO:0005737
GO:GO:0045893 GO:GO:0043234 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0004842 GO:GO:0007389 GO:GO:0000209
GO:GO:0030579 EMBL:CH474041 CTD:54778 KO:K10635 OMA:CDDSQKQ
GeneTree:ENSGT00670000097625 OrthoDB:EOG4MSCXR IPI:IPI00370163
RefSeq:NP_001100306.1 UniGene:Rn.82537 Ensembl:ENSRNOT00000017918
GeneID:300813 KEGG:rno:300813 UCSC:RGD:1310097 NextBio:647579
Uniprot:D4A9T1
Length = 987
Score = 159 (61.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 93 SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP 151
+++ E+ C +CL +EGE VR LP C+HLFH C+D WL ++ CP+CR + A P
Sbjct: 927 TEEDTEEKCTICLSILEEGEDVRRLP-CMHLFHQVCVDQWLITNKKCPICRVDIEAQLP 984
Score = 36 (17.7 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 68 RQEWPRDRIRTSSVMRVL 85
R + PR+R R S+V++ L
Sbjct: 354 RAQEPRNRSRISTVIQPL 371
>UNIPROTKB|Q6ZNA4 [details] [associations]
symbol:RNF111 "E3 ubiquitin-protein ligase Arkadia"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0007389 "pattern specification process"
evidence=IEA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0030579 "ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA] [GO:0032184
"SUMO polymer binding" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737
Reactome:REACT_111102 Reactome:REACT_6900
Pathway_Interaction_DB:tgfbrpathway GO:GO:0043234 GO:GO:0005654
GO:GO:0005730 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0007179 GO:GO:0030511 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0004842 GO:GO:0007389 GO:GO:0000209
EMBL:CH471082 GO:GO:0006367 GO:GO:0032184 GO:GO:0030579
EMBL:AC092757 EMBL:AK095327 EMBL:AK131304 EMBL:AK131488
EMBL:AL157474 EMBL:BX538130 EMBL:BX647259 EMBL:AC025918
EMBL:AC090515 EMBL:BC010369 EMBL:BC020984 EMBL:BC060862
IPI:IPI00418593 IPI:IPI00798384 IPI:IPI00829658 PIR:T46904
RefSeq:NP_001257457.1 RefSeq:NP_001257458.1 RefSeq:NP_001257459.1
RefSeq:NP_060080.6 UniGene:Hs.404423 UniGene:Hs.603489
UniGene:Hs.741727 PDB:2KIZ PDBsum:2KIZ ProteinModelPortal:Q6ZNA4
SMR:Q6ZNA4 IntAct:Q6ZNA4 MINT:MINT-1187466 STRING:Q6ZNA4
PhosphoSite:Q6ZNA4 DMDM:308153555 PRIDE:Q6ZNA4
Ensembl:ENST00000348370 Ensembl:ENST00000434298
Ensembl:ENST00000557998 Ensembl:ENST00000559209
Ensembl:ENST00000561186 GeneID:54778 KEGG:hsa:54778 UCSC:uc002afs.3
UCSC:uc002aft.3 UCSC:uc002afv.3 CTD:54778 GeneCards:GC15P059160
HGNC:HGNC:17384 HPA:HPA038576 HPA:HPA038577 MIM:605840
neXtProt:NX_Q6ZNA4 PharmGKB:PA134868772 eggNOG:NOG291583
HOVERGEN:HBG093884 InParanoid:Q6ZNA4 KO:K10635 OMA:CDDSQKQ
GenomeRNAi:54778 NextBio:57437 Bgee:Q6ZNA4 CleanEx:HS_RNF111
Genevestigator:Q6ZNA4 Uniprot:Q6ZNA4
Length = 994
Score = 159 (61.0 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 93 SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP 151
+++ E+ C +CL +EGE VR LP C+HLFH C+D WL ++ CP+CR + A P
Sbjct: 934 TEEDTEEKCTICLSILEEGEDVRRLP-CMHLFHQVCVDQWLITNKKCPICRVDIEAQLP 991
Score = 36 (17.7 bits), Expect = 1.8e-11, Sum P(2) = 1.8e-11
Identities = 8/18 (44%), Positives = 13/18 (72%)
Query: 68 RQEWPRDRIRTSSVMRVL 85
R + PR+R R S+V++ L
Sbjct: 358 RPQEPRNRSRISTVIQPL 375
Score = 34 (17.0 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 63 RNYDHRQ-EWPRDRIRTSSVMRVLM 86
R++ R +WPR T SV +LM
Sbjct: 175 RSHSARSHKWPRTE--TESVSGLLM 197
>UNIPROTKB|B3KR12 [details] [associations]
symbol:RNF13 "cDNA FLJ33452 fis, clone BRAMY2000151, highly
similar to RING finger protein 13" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
EMBL:CH471052 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000234362 HOVERGEN:HBG063762 EMBL:AC069216 EMBL:AC117395
UniGene:Hs.12333 HGNC:HGNC:10057 ChiTaRS:RNF13 EMBL:AK090771
IPI:IPI00373832 SMR:B3KR12 STRING:B3KR12 Ensembl:ENST00000361785
UCSC:uc010hvh.3 Uniprot:B3KR12
Length = 262
Score = 158 (60.7 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 67 HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
HR R+R+R + + +PV +F D D CA+CL ++++G+++R+LP C H +H
Sbjct: 92 HRAR--RNRLRKDQLKK--LPVHKFKKGD-EYDVCAICLDEYEDGDKLRILP-CSHAYHC 145
Query: 127 PCIDMWLS-SHSNCPLCR 143
C+D WL+ + CP+C+
Sbjct: 146 KCVDPWLTKTKKTCPVCK 163
>TAIR|locus:2097890 [details] [associations]
symbol:AT3G48030 "AT3G48030" species:3702 "Arabidopsis
thaliana" [GO:0001666 "response to hypoxia" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Pfam:PF04588 Prosite:PS00518
GO:GO:0016021 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL049658 EMBL:AB099346 EMBL:BT008566 EMBL:BT008679
IPI:IPI00518659 IPI:IPI00656859 IPI:IPI00656975 PIR:T06680
RefSeq:NP_190386.1 UniGene:At.35746 ProteinModelPortal:Q7X843
SMR:Q7X843 PaxDb:Q7X843 PRIDE:Q7X843 EnsemblPlants:AT3G48030.1
GeneID:823958 KEGG:ath:AT3G48030 TAIR:At3g48030 eggNOG:NOG250531
HOGENOM:HOG000034172 InParanoid:Q7X843 OMA:RFKSTNE PhylomeDB:Q7X843
ProtClustDB:CLSN2913369 Genevestigator:Q7X843 GermOnline:AT3G48030
InterPro:IPR007667 PROSITE:PS51503 Uniprot:Q7X843
Length = 349
Score = 162 (62.1 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 28/67 (41%), Positives = 44/67 (65%)
Query: 86 MPVFRFSSKDCNEDT---CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLC 142
+PVF + + + + CAVCL +F + +++R+LP C H FH+ CID WL S+S CPLC
Sbjct: 189 LPVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLC 248
Query: 143 RANANAA 149
R + + +
Sbjct: 249 RRSLSTS 255
>UNIPROTKB|B4DYE0 [details] [associations]
symbol:RNF44 "cDNA FLJ61466, highly similar to Homo sapiens
ring finger protein 44 (RNF44), mRNA" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC091934
HOVERGEN:HBG059283 UniGene:Hs.434888 HGNC:HGNC:19180 ChiTaRS:RNF44
EMBL:AC010316 EMBL:AK302385 IPI:IPI01010913 SMR:B4DYE0
Ensembl:ENST00000537487 Uniprot:B4DYE0
Length = 351
Score = 162 (62.1 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 86 MPVFRFS--SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ S + C VC DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 282 LPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLP-CNHEFHTKCVDKWLKANRTCPICR 340
Query: 144 ANANAAP 150
A+A+ P
Sbjct: 341 ADASEVP 347
>TAIR|locus:2039170 [details] [associations]
symbol:AT2G35910 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000237642
EMBL:AC007017 EMBL:AY090933 EMBL:AY122973 IPI:IPI00540918
PIR:E84774 RefSeq:NP_850254.1 UniGene:At.37613
ProteinModelPortal:Q8RX29 SMR:Q8RX29 EnsemblPlants:AT2G35910.1
GeneID:818164 KEGG:ath:AT2G35910 TAIR:At2g35910 eggNOG:NOG261083
InParanoid:Q8RX29 OMA:TASCCAI PhylomeDB:Q8RX29
ProtClustDB:CLSN2918183 Genevestigator:Q8RX29 GermOnline:AT2G35910
Uniprot:Q8RX29
Length = 217
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAP 150
CA+CLGD+K +R LP+C HLFH+ CID WL + CP+CR + P
Sbjct: 147 CAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCRTSPLPTP 196
>TAIR|locus:4515102621 [details] [associations]
symbol:ATL1F species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GO:GO:0046872 GO:GO:0008270 EMBL:AC007767
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC084110
EMBL:DQ487502 EMBL:EF183179 IPI:IPI00519561 PIR:E86448
RefSeq:NP_001117398.1 UniGene:At.69078 ProteinModelPortal:Q9LQM2
SMR:Q9LQM2 PRIDE:Q9LQM2 EnsemblPlants:AT1G32361.1 GeneID:6240625
KEGG:ath:AT1G32361 TAIR:At1g32361 eggNOG:NOG250632 OMA:TIRLIST
PhylomeDB:Q9LQM2 ProtClustDB:CLSN2925449 Genevestigator:Q9LQM2
Uniprot:Q9LQM2
Length = 332
Score = 161 (61.7 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 72 PRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDM 131
P + + S + P + +S KD D C++CL +F + + +R++ C H FH CID+
Sbjct: 125 PPENLGLDSKIIESFPEYPYSVKDHGTDQCSICLTEFMDDDTIRLISTCNHSFHTICIDL 184
Query: 132 WLSSHSNCPLCR 143
W H CP+CR
Sbjct: 185 WFEGHKTCPVCR 196
>UNIPROTKB|F1NUJ3 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 GO:GO:0031902 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0051865 GeneTree:ENSGT00700000104226 EMBL:AADN02021136
EMBL:AADN02021135 IPI:IPI00820464 Ensembl:ENSGALT00000038908
Uniprot:F1NUJ3
Length = 272
Score = 158 (60.7 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 67 HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
HR R+R+R + + +PV +F D D CA+CL ++++G+++R+LP C H +H
Sbjct: 169 HRAR--RNRLRKDQLKK--LPVHKFKKGD-EYDVCAICLDEYEDGDKLRILP-CSHAYHC 222
Query: 127 PCIDMWLS-SHSNCPLCR 143
C+D WL+ + CP+C+
Sbjct: 223 KCVDPWLTKTKKTCPVCK 240
>UNIPROTKB|F1S5Q0 [details] [associations]
symbol:LOC100519887 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
OMA:PLRTSGM EMBL:CU639394 Ensembl:ENSSSCT00000015306
ArrayExpress:F1S5Q0 Uniprot:F1S5Q0
Length = 273
Score = 158 (60.7 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
D + D CAVC+ +K+ + VR+LP C H+FH C+D WLS H CP+C+ N
Sbjct: 112 DPDFDHCAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCKLN 161
>RGD|1307212 [details] [associations]
symbol:Rnf44 "ring finger protein 44" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1307212 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5
HOGENOM:HOG000231638 HOVERGEN:HBG059283 CTD:22838 OrthoDB:EOG498V0T
EMBL:BC098030 IPI:IPI00364712 RefSeq:NP_001019966.1
UniGene:Rn.21345 ProteinModelPortal:Q4V7B8 SMR:Q4V7B8
PhosphoSite:Q4V7B8 GeneID:361212 KEGG:rno:361212 UCSC:RGD:1307212
NextBio:675562 Genevestigator:Q4V7B8 Uniprot:Q4V7B8
Length = 350
Score = 161 (61.7 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 86 MPVFRFS--SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ S + C VC DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 281 LPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 339
Query: 144 ANANAAP 150
A+A+ P
Sbjct: 340 ADASEVP 346
>UNIPROTKB|Q4V7B8 [details] [associations]
symbol:Rnf44 "RING finger protein 44" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1307212 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5
HOGENOM:HOG000231638 HOVERGEN:HBG059283 CTD:22838 OrthoDB:EOG498V0T
EMBL:BC098030 IPI:IPI00364712 RefSeq:NP_001019966.1
UniGene:Rn.21345 ProteinModelPortal:Q4V7B8 SMR:Q4V7B8
PhosphoSite:Q4V7B8 GeneID:361212 KEGG:rno:361212 UCSC:RGD:1307212
NextBio:675562 Genevestigator:Q4V7B8 Uniprot:Q4V7B8
Length = 350
Score = 161 (61.7 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 86 MPVFRFS--SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ S + C VC DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 281 LPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 339
Query: 144 ANANAAP 150
A+A+ P
Sbjct: 340 ADASEVP 346
>TAIR|locus:1006230395 [details] [associations]
symbol:AT4G24015 "AT4G24015" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 Prosite:PS00518 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL078468
HOGENOM:HOG000006232 UniGene:At.32387 EMBL:AF079178 EMBL:BT005844
IPI:IPI00523532 PIR:T51850 RefSeq:NP_974604.1
ProteinModelPortal:Q84TF5 SMR:Q84TF5 EnsemblPlants:AT4G24015.1
GeneID:2745724 KEGG:ath:AT4G24015 TAIR:At4g24015 eggNOG:NOG268148
InParanoid:Q84TF5 OMA:TPHLYPQ PhylomeDB:Q84TF5
ProtClustDB:CLSN2713511 Genevestigator:Q84TF5 Uniprot:Q84TF5
Length = 174
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 98 EDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPPPHLVLT 157
+ C VCLG+F+ E++ +P C H+FH+ CI +WL SH+ CPLCR++ + + V
Sbjct: 102 DSLCCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPLCRSSVSISSTKTSVDD 161
Query: 158 LPDSGGAPQ 166
D +PQ
Sbjct: 162 DNDHPDSPQ 170
>TAIR|locus:4515102991 [details] [associations]
symbol:AT2G44581 "AT2G44581" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 EMBL:AC003672
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG329235
HOGENOM:HOG000015208 ProtClustDB:CLSN2681377 IPI:IPI00891754
RefSeq:NP_001118526.1 UniGene:At.73710 ProteinModelPortal:B3H6J7
SMR:B3H6J7 EnsemblPlants:AT2G44581.1 GeneID:6241397
KEGG:ath:AT2G44581 TAIR:At2g44581 OMA:ATEGEKM PhylomeDB:B3H6J7
Genevestigator:B3H6J7 Uniprot:B3H6J7
Length = 145
Score = 155 (59.6 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 29/61 (47%), Positives = 35/61 (57%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP--PHLVLTL 158
C +CL + EGE++R + C H FHV CID WL S CPLCRA PP P L +
Sbjct: 70 CTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEIPPVPPGNPLRALFI 129
Query: 159 P 159
P
Sbjct: 130 P 130
>UNIPROTKB|F8WCD0 [details] [associations]
symbol:RNF149 "E3 ubiquitin-protein ligase RNF149"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC013722
EMBL:AC073643 HGNC:HGNC:23137 IPI:IPI00917006
ProteinModelPortal:F8WCD0 SMR:F8WCD0 Ensembl:ENST00000424632
ArrayExpress:F8WCD0 Bgee:F8WCD0 Uniprot:F8WCD0
Length = 398
Score = 147 (56.8 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 75 RIRTSSVM-RVLMPVFRFSSK--DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDM 131
R T V+ ++L+ + K D + + CAVC+ +FK + +R+LP C H+FH CID
Sbjct: 240 RKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILP-CKHIFHRICIDP 298
Query: 132 WLSSHSNCPLCR 143
WL H CP+C+
Sbjct: 299 WLLDHRTCPMCK 310
Score = 35 (17.4 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 150 PPPHLVLTLPDSGGA 164
P +L L LPD G+
Sbjct: 340 PAANLSLALPDDDGS 354
>UNIPROTKB|Q8NC42 [details] [associations]
symbol:RNF149 "E3 ubiquitin-protein ligase RNF149"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518 GO:GO:0016021
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:NOG302028
EMBL:AC013722 HOGENOM:HOG000231432 HOVERGEN:HBG057659 EMBL:AY450390
EMBL:AK074985 EMBL:AK075141 EMBL:AM392566 EMBL:AC073643
EMBL:BC019355 EMBL:BC032328 EMBL:BC045743 IPI:IPI00175092
RefSeq:NP_775918.2 UniGene:Hs.142074 ProteinModelPortal:Q8NC42
SMR:Q8NC42 IntAct:Q8NC42 PhosphoSite:Q8NC42 DMDM:160332298
PaxDb:Q8NC42 PRIDE:Q8NC42 DNASU:284996 Ensembl:ENST00000295317
GeneID:284996 KEGG:hsa:284996 UCSC:uc002taz.2 CTD:284996
GeneCards:GC02M101887 H-InvDB:HIX0023941 HGNC:HGNC:23137
HPA:HPA011424 neXtProt:NX_Q8NC42 PharmGKB:PA134895641
InParanoid:Q8NC42 KO:K15704 OMA:GCAPDTR GenomeRNAi:284996
NextBio:95209 ArrayExpress:Q8NC42 Bgee:Q8NC42 CleanEx:HS_RNF149
Genevestigator:Q8NC42 GermOnline:ENSG00000163162 Uniprot:Q8NC42
Length = 400
Score = 147 (56.8 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 28/72 (38%), Positives = 43/72 (59%)
Query: 75 RIRTSSVM-RVLMPVFRFSSK--DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDM 131
R T V+ ++L+ + K D + + CAVC+ +FK + +R+LP C H+FH CID
Sbjct: 240 RKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILP-CKHIFHRICIDP 298
Query: 132 WLSSHSNCPLCR 143
WL H CP+C+
Sbjct: 299 WLLDHRTCPMCK 310
Score = 35 (17.4 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 150 PPPHLVLTLPDSGGA 164
P +L L LPD G+
Sbjct: 340 PAANLSLALPDDDGS 354
>UNIPROTKB|Q7L0R7 [details] [associations]
symbol:RNF44 "RING finger protein 44" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5 HOGENOM:HOG000231638
HOVERGEN:HBG059283 CTD:22838 OMA:CSAQQLP OrthoDB:EOG498V0T
EMBL:AB029023 EMBL:BC039833 EMBL:BC063297 EMBL:AL834489
IPI:IPI00470579 RefSeq:NP_055716.1 UniGene:Hs.434888
ProteinModelPortal:Q7L0R7 SMR:Q7L0R7 IntAct:Q7L0R7
PhosphoSite:Q7L0R7 DMDM:74758994 PRIDE:Q7L0R7
Ensembl:ENST00000274811 GeneID:22838 KEGG:hsa:22838 UCSC:uc003mek.1
GeneCards:GC05M175886 HGNC:HGNC:19180 HPA:HPA038981
neXtProt:NX_Q7L0R7 PharmGKB:PA38819 InParanoid:Q7L0R7
PhylomeDB:Q7L0R7 ChiTaRS:RNF44 GenomeRNAi:22838 NextBio:43277
ArrayExpress:Q7L0R7 Bgee:Q7L0R7 CleanEx:HS_RNF44
Genevestigator:Q7L0R7 Uniprot:Q7L0R7
Length = 432
Score = 162 (62.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 86 MPVFRFS--SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ S + C VC DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 363 LPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLP-CNHEFHTKCVDKWLKANRTCPICR 421
Query: 144 ANANAAP 150
A+A+ P
Sbjct: 422 ADASEVP 428
>UNIPROTKB|E1BBM5 [details] [associations]
symbol:RNF167 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
OMA:DSWLTSW EMBL:DAAA02048752 IPI:IPI00728966
Ensembl:ENSBTAT00000006464 Uniprot:E1BBM5
Length = 295
Score = 158 (60.7 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 28/89 (31%), Positives = 50/89 (56%)
Query: 63 RNYDHRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLH 122
R HR+ R+R+ + ++ P + D D CA+CL ++++G+++RVLP C H
Sbjct: 141 RCIQHRKRLQRNRLTKEQLKQI--PTHDYQKGD-QYDVCAICLDEYEDGDKLRVLP-CAH 196
Query: 123 LFHVPCIDMWLS-SHSNCPLCRANANAAP 150
+H C+D WL+ + CP+C+ + P
Sbjct: 197 AYHSRCVDPWLTQTRKTCPICKQPVHRGP 225
>UNIPROTKB|F1P629 [details] [associations]
symbol:RNF44 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:CSAQQLP EMBL:AAEX03002976
Ensembl:ENSCAFT00000026405 Uniprot:F1P629
Length = 441
Score = 162 (62.1 bits), Expect = 3.3e-11, P = 3.3e-11
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 86 MPVFRFS--SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ S + C VC DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 372 LPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLP-CNHEFHTKCVDKWLKANRTCPICR 430
Query: 144 ANANAAP 150
A+A+ P
Sbjct: 431 ADASEVP 437
>TAIR|locus:4010713762 [details] [associations]
symbol:AT3G20395 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:DQ487563 IPI:IPI00775679 RefSeq:NP_001078194.1
UniGene:At.71273 UniGene:At.8179 ProteinModelPortal:Q1G3M1
SMR:Q1G3M1 EnsemblPlants:AT3G20395.1 GeneID:5008015
KEGG:ath:AT3G20395 TAIR:At3g20395 OMA:MNCIDEW PhylomeDB:Q1G3M1
ProtClustDB:CLSN2920167 Genevestigator:Q1G3M1 Uniprot:Q1G3M1
Length = 223
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 30/79 (37%), Positives = 44/79 (55%)
Query: 65 YDHRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLF 124
YD E + + SS+ + P+F S+ + +C++CL D++EGE R L C H F
Sbjct: 139 YDFNHE--KKGLSKSSIQNI--PMFYNRSEHQTKSSCSICLQDWEEGEVGRKLARCGHTF 194
Query: 125 HVPCIDMWLSSHSNCPLCR 143
H+ CID WL CP+CR
Sbjct: 195 HMNCIDEWLLRQETCPICR 213
>MGI|MGI:2145310 [details] [associations]
symbol:Rnf44 "ring finger protein 44" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:2145310
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 HSSP:Q9H0F5
GeneTree:ENSGT00670000097625 HOGENOM:HOG000231638
HOVERGEN:HBG059283 CTD:22838 ChiTaRS:RNF44 EMBL:AK129290
EMBL:AK147349 EMBL:AK160090 EMBL:AK160115 EMBL:AK171943
EMBL:BC017630 EMBL:BC035548 IPI:IPI00453833 IPI:IPI00828733
IPI:IPI00828814 RefSeq:NP_001139497.1 RefSeq:NP_001139498.1
RefSeq:NP_001139499.1 RefSeq:NP_598825.2 UniGene:Mm.25366
ProteinModelPortal:Q3UHJ8 SMR:Q3UHJ8 PhosphoSite:Q3UHJ8
PRIDE:Q3UHJ8 Ensembl:ENSMUST00000037422 Ensembl:ENSMUST00000128257
Ensembl:ENSMUST00000134862 Ensembl:ENSMUST00000150806
Ensembl:ENSMUST00000177950 GeneID:105239 KEGG:mmu:105239
UCSC:uc007qot.2 UCSC:uc007qou.2 UCSC:uc007qow.2 InParanoid:Q3UHJ8
NextBio:357544 Bgee:Q3UHJ8 CleanEx:MM_RNF44 Genevestigator:Q3UHJ8
Uniprot:Q3UHJ8
Length = 407
Score = 161 (61.7 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 28/67 (41%), Positives = 41/67 (61%)
Query: 86 MPVFRFS--SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ S + C VC DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 338 LPSYRFNPDSHQSEQTLCVVCFSDFEVRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 396
Query: 144 ANANAAP 150
A+A+ P
Sbjct: 397 ADASEVP 403
>TAIR|locus:2173772 [details] [associations]
symbol:AT5G40250 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000239562 EMBL:AB010699 EMBL:AK176313 IPI:IPI00524067
RefSeq:NP_198841.1 UniGene:At.51073 ProteinModelPortal:Q9FL07
SMR:Q9FL07 EnsemblPlants:AT5G40250.1 GeneID:834023
KEGG:ath:AT5G40250 TAIR:At5g40250 eggNOG:NOG264344
InParanoid:Q9FL07 OMA:FHYKEIV PhylomeDB:Q9FL07
ProtClustDB:CLSN2687536 Genevestigator:Q9FL07 GermOnline:AT5G40250
Uniprot:Q9FL07
Length = 376
Score = 160 (61.4 bits), Expect = 3.9e-11, P = 3.9e-11
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
CAVCL +F E +++R+LP C H FH+ CID WL S+S CPLCR
Sbjct: 143 CAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCR 185
>UNIPROTKB|F1N0G7 [details] [associations]
symbol:RNF44 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 CTD:22838 OMA:CSAQQLP
EMBL:DAAA02020035 IPI:IPI00688854 RefSeq:NP_001179642.1
UniGene:Bt.6313 ProteinModelPortal:F1N0G7
Ensembl:ENSBTAT00000023598 GeneID:531968 KEGG:bta:531968
NextBio:20875566 Uniprot:F1N0G7
Length = 432
Score = 161 (61.7 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 86 MPVFRF--SSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF S + C VC DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 363 LPSYRFHPDSHQSEQTLCVVCFSDFEARQLLRVLP-CNHEFHTKCVDKWLKANRTCPICR 421
Query: 144 ANANAAP 150
A+A+ P
Sbjct: 422 ADASEVP 428
>UNIPROTKB|F1S3A0 [details] [associations]
symbol:RNF44 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:CSAQQLP EMBL:FP101981
Ensembl:ENSSSCT00000015355 Uniprot:F1S3A0
Length = 437
Score = 161 (61.7 bits), Expect = 4.2e-11, P = 4.2e-11
Identities = 28/67 (41%), Positives = 40/67 (59%)
Query: 86 MPVFRF--SSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF S + C VC DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 368 LPSYRFHPDSHQSEQTLCVVCFSDFEARQLLRVLP-CNHEFHTKCVDKWLKANRTCPICR 426
Query: 144 ANANAAP 150
A+A+ P
Sbjct: 427 ADASEVP 433
>UNIPROTKB|D6RIE5 [details] [associations]
symbol:RNF150 "RING finger protein 150" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HOGENOM:HOG000231432 EMBL:AC093905 EMBL:AC096733 EMBL:AC097475
HGNC:HGNC:23138 EMBL:AC107220 IPI:IPI00964624
ProteinModelPortal:D6RIE5 SMR:D6RIE5 Ensembl:ENST00000506101
ArrayExpress:D6RIE5 Bgee:D6RIE5 Uniprot:D6RIE5
Length = 230
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 99 DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN---ANAAPP 151
D CAVC+ +K + VR+LP C HLFH C+D WL H CP+C+ N A PP
Sbjct: 107 DNCAVCIEGYKPNDVVRILP-CRHLFHKSCVDPWLLDHRTCPMCKMNILKALGIPP 161
>TAIR|locus:2019110 [details] [associations]
symbol:AT1G74410 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0010200
"response to chitin" evidence=IEP] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006952 GO:GO:0046872
GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC011765 HOGENOM:HOG000242081 EMBL:DQ059105 EMBL:AY050433
EMBL:AY093797 EMBL:AY087335 IPI:IPI00547905 PIR:H96772
RefSeq:NP_565085.1 UniGene:At.20400 UniGene:At.28630
ProteinModelPortal:Q8LBA0 SMR:Q8LBA0 PaxDb:Q8LBA0 PRIDE:Q8LBA0
EnsemblPlants:AT1G74410.1 GeneID:843782 KEGG:ath:AT1G74410
GeneFarm:2887 TAIR:At1g74410 eggNOG:NOG325712 InParanoid:Q8LBA0
OMA:LPNCSHT PhylomeDB:Q8LBA0 ProtClustDB:CLSN2689196
Genevestigator:Q8LBA0 Uniprot:Q8LBA0
Length = 223
Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 26/60 (43%), Positives = 35/60 (58%)
Query: 86 MPVFRFSSKDCNEDT--CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P + SS+ C +CL D K GE R LP+C H FH+ C+D WL H +CP+CR
Sbjct: 159 LPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICR 218
>ZFIN|ZDB-GENE-060213-1 [details] [associations]
symbol:rnf150a "ring finger protein 150a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
ZFIN:ZDB-GENE-060213-1 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:NOG302028 GeneTree:ENSGT00700000104211
HOGENOM:HOG000231432 HOVERGEN:HBG057659 OrthoDB:EOG412M5G
EMBL:BX957281 IPI:IPI00638837 RefSeq:NP_001139044.1
UniGene:Dr.113703 ProteinModelPortal:B8A6H5
Ensembl:ENSDART00000035713 GeneID:559804 OMA:CAICIEN
NextBio:20883145 Bgee:B8A6H5 Uniprot:B8A6H5
Length = 418
Score = 160 (61.4 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 28/60 (46%), Positives = 37/60 (61%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN---ANAAPP 151
D + D CAVC+ D+K + VR+LP C H+FH C+D WL H CP+C+ N A PP
Sbjct: 259 DSDFDNCAVCIEDYKPNDVVRILP-CRHVFHRNCVDPWLQDHRTCPMCKMNILKALGIPP 317
>UNIPROTKB|F1PQP8 [details] [associations]
symbol:RNF130 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0012501 "programmed cell death" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0012501 GeneTree:ENSGT00700000104211
OMA:PLRTSGM EMBL:AAEX03007678 Ensembl:ENSCAFT00000038586
Uniprot:F1PQP8
Length = 344
Score = 158 (60.7 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
D + D CAVC+ +K+ + VR+LP C H+FH C+D WLS H CP+C+ N
Sbjct: 187 DPDFDHCAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCKLN 236
>MGI|MGI:1917760 [details] [associations]
symbol:Rnf167 "ring finger protein 167" species:10090 "Mus
musculus" [GO:0000209 "protein polyubiquitination" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016874
"ligase activity" evidence=IEA] [GO:0045786 "negative regulation of
cell cycle" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 InterPro:IPR003137
MGI:MGI:1917760 Pfam:PF02225 Prosite:PS00518 GO:GO:0016021
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0012505
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
GO:GO:0000209 GO:GO:0045786 EMBL:AL596117
GeneTree:ENSGT00700000104226 CTD:26001 HOGENOM:HOG000234362
HOVERGEN:HBG063762 KO:K15706 OrthoDB:EOG4QJRP0 ChiTaRS:RNF167
EMBL:AK154071 EMBL:BC010777 IPI:IPI00129099 RefSeq:NP_081721.1
UniGene:Mm.261818 ProteinModelPortal:Q91XF4 SMR:Q91XF4
STRING:Q91XF4 PhosphoSite:Q91XF4 PRIDE:Q91XF4
Ensembl:ENSMUST00000037534 GeneID:70510 KEGG:mmu:70510
InParanoid:Q91XF4 OMA:DSWLTSW NextBio:331771 Bgee:Q91XF4
CleanEx:MM_RNF167 Genevestigator:Q91XF4
GermOnline:ENSMUSG00000040746 Uniprot:Q91XF4
Length = 347
Score = 158 (60.7 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 28/89 (31%), Positives = 50/89 (56%)
Query: 63 RNYDHRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLH 122
R HR+ R+R+ + ++ P + D D CA+CL ++++G+++RVLP C H
Sbjct: 195 RCIQHRKRLQRNRLTKEQLKQI--PTHDYQKGD-EYDVCAICLDEYEDGDKLRVLP-CAH 250
Query: 123 LFHVPCIDMWLS-SHSNCPLCRANANAAP 150
+H C+D WL+ + CP+C+ + P
Sbjct: 251 AYHSRCVDPWLTQTRKTCPICKQPVHRGP 279
>UNIPROTKB|F1RFY0 [details] [associations]
symbol:RNF167 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045786 "negative regulation of cell cycle"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0000209
"protein polyubiquitination" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000209 GO:GO:0045786
GeneTree:ENSGT00700000104226 KO:K15706 OMA:DSWLTSW EMBL:FP015831
RefSeq:XP_003131954.1 UniGene:Ssc.20226 Ensembl:ENSSSCT00000019486
GeneID:100512310 KEGG:ssc:100512310 Uniprot:F1RFY0
Length = 350
Score = 158 (60.7 bits), Expect = 5.4e-11, P = 5.4e-11
Identities = 28/89 (31%), Positives = 50/89 (56%)
Query: 63 RNYDHRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLH 122
R HR+ R+R+ + ++ P + D D CA+CL ++++G+++RVLP C H
Sbjct: 195 RCIQHRKRLQRNRLTKEQLKQI--PTHDYQKGD-QYDVCAICLDEYEDGDRLRVLP-CAH 250
Query: 123 LFHVPCIDMWLS-SHSNCPLCRANANAAP 150
+H C+D WL+ + CP+C+ + P
Sbjct: 251 AYHSRCVDPWLTQTRKTCPICKQPVHRGP 279
>TAIR|locus:2040736 [details] [associations]
symbol:AT2G37580 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0016757 "transferase activity, transferring
glycosyl groups" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 EMBL:AC004684
Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:BT024849 EMBL:AY084758
IPI:IPI00534718 PIR:T02524 RefSeq:NP_565865.1 UniGene:At.37407
ProteinModelPortal:O80927 SMR:O80927 EnsemblPlants:AT2G37580.1
GeneID:818334 KEGG:ath:AT2G37580 TAIR:At2g37580 eggNOG:NOG296823
HOGENOM:HOG000029123 InParanoid:O80927 OMA:KEIGNEC PhylomeDB:O80927
ProtClustDB:CLSN2917258 Genevestigator:O80927 GermOnline:AT2G37580
Uniprot:O80927
Length = 235
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 93 SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANAN 147
SK+ + C+VCL F + +++R L EC H FHV CI+ WL H NCP+CR + +
Sbjct: 135 SKEIGNE-CSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTDVS 188
>TAIR|locus:2195498 [details] [associations]
symbol:AT1G63840 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0007165
"signal transduction" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009723 "response to ethylene stimulus"
evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009753 "response to jasmonic acid
stimulus" evidence=RCA] [GO:0042538 "hyperosmotic salinity
response" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684 GO:GO:0009737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC010852 HOGENOM:HOG000239353 EMBL:AY058131
EMBL:BT010153 EMBL:AK227440 IPI:IPI00532654 PIR:E96663
RefSeq:NP_176569.1 UniGene:At.21224 UniGene:At.67559
ProteinModelPortal:Q9CAJ8 SMR:Q9CAJ8 EnsemblPlants:AT1G63840.1
GeneID:842687 KEGG:ath:AT1G63840 TAIR:At1g63840 InParanoid:Q9CAJ8
OMA:CCAVCLY PhylomeDB:Q9CAJ8 ProtClustDB:CLSN2682608
Genevestigator:Q9CAJ8 Uniprot:Q9CAJ8
Length = 166
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 31/75 (41%), Positives = 44/75 (58%)
Query: 85 LMPVFRFSSKDCNE-DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSN--CPL 141
++PV RFS + E + CAVCL DF+ +++R L C H+FH C+D W+ ++ CPL
Sbjct: 72 MLPVVRFSDINRPESECCAVCLYDFENDDEIRRLTNCRHIFHRGCLDRWMMGYNQMTCPL 131
Query: 142 CRANANAAPPPHLVL 156
CR P HL L
Sbjct: 132 CRTQFI---PDHLQL 143
>TAIR|locus:2062502 [details] [associations]
symbol:AT2G35420 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC005314
EMBL:BT012632 IPI:IPI00523782 PIR:D84768 RefSeq:NP_181085.2
UniGene:At.48551 UniGene:At.66436 UniGene:At.67876
ProteinModelPortal:Q6NKR1 SMR:Q6NKR1 EnsemblPlants:AT2G35420.1
GeneID:818108 KEGG:ath:AT2G35420 TAIR:At2g35420 eggNOG:NOG326691
HOGENOM:HOG000034167 InParanoid:Q6NKR1 OMA:HISRIEV PhylomeDB:Q6NKR1
ProtClustDB:CLSN2915128 Genevestigator:Q6NKR1 Uniprot:Q6NKR1
Length = 254
Score = 153 (58.9 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 27/59 (45%), Positives = 36/59 (61%)
Query: 87 PVFRFSSKDC-NEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
PVF +SS N T CA+CL +F + + VR++ C H FH CID+W H CP+CR
Sbjct: 87 PVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLWFELHKTCPVCR 145
>MGI|MGI:1891717 [details] [associations]
symbol:Rnf130 "ring finger protein 130" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0012501 "programmed cell death" evidence=IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=NAS] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 MGI:MGI:1891717 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 eggNOG:NOG302028 GO:GO:0012501 EMBL:AL627187
GeneTree:ENSGT00700000104211 CTD:55819 HOGENOM:HOG000231432
HOVERGEN:HBG057659 KO:K15701 OrthoDB:EOG40VVQ5 EMBL:AF171875
EMBL:AL645913 EMBL:BC018199 EMBL:BC048901 IPI:IPI00331206
RefSeq:NP_067515.2 UniGene:Mm.359004 ProteinModelPortal:Q8VEM1
SMR:Q8VEM1 STRING:Q8VEM1 PhosphoSite:Q8VEM1 PRIDE:Q8VEM1
Ensembl:ENSMUST00000102776 GeneID:59044 KEGG:mmu:59044
UCSC:uc007irl.1 InParanoid:Q8VEM1 OMA:PLRTSGM NextBio:314662
Bgee:Q8VEM1 CleanEx:MM_RNF130 Genevestigator:Q8VEM1
GermOnline:ENSMUSG00000020376 Uniprot:Q8VEM1
Length = 419
Score = 159 (61.0 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
D + D CAVC+ +K+ + VRVLP C H+FH C+D WLS H CP+C+ N
Sbjct: 258 DPDFDHCAVCIESYKQNDVVRVLP-CKHVFHKSCVDPWLSEHCTCPMCKLN 307
>RGD|1562041 [details] [associations]
symbol:LOC652955 "goliath" species:10116 "Rattus norvegicus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0012501 "programmed cell death" evidence=ISS] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 RGD:1562041 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005737 GO:GO:0006915 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0012501 HOVERGEN:HBG057659 KO:K15701 EMBL:AY190520
IPI:IPI00454369 RefSeq:NP_001032747.1 UniGene:Rn.186211
ProteinModelPortal:Q6Y290 GeneID:652955 KEGG:rno:652955
NextBio:714879 Genevestigator:Q6Y290 Uniprot:Q6Y290
Length = 419
Score = 159 (61.0 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
D + D CAVC+ +K+ + VRVLP C H+FH C+D WLS H CP+C+ N
Sbjct: 258 DPDFDHCAVCIESYKQNDVVRVLP-CKHVFHKSCVDPWLSEHCTCPMCKLN 307
>UNIPROTKB|F1NA38 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 GO:GO:0031902 GO:GO:0005765 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0051865 GeneTree:ENSGT00700000104226 OMA:MGSNDID
IPI:IPI00587571 EMBL:AADN02021136 EMBL:AADN02021135
Ensembl:ENSGALT00000016951 Uniprot:F1NA38
Length = 380
Score = 158 (60.7 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 67 HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
HR R+R+R + + +PV +F D D CA+CL ++++G+++R+LP C H +H
Sbjct: 210 HRAR--RNRLRKDQLKK--LPVHKFKKGD-EYDVCAICLDEYEDGDKLRILP-CSHAYHC 263
Query: 127 PCIDMWLS-SHSNCPLCR 143
C+D WL+ + CP+C+
Sbjct: 264 KCVDPWLTKTKKTCPVCK 281
>UNIPROTKB|Q0VD51 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0005637 "nuclear
inner membrane" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 Prosite:PS00518 GO:GO:0016021 GO:GO:0000139
GO:GO:0031902 GO:GO:0005765 GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 GO:GO:0051865 GO:GO:0005637
GeneTree:ENSGT00700000104226 HOGENOM:HOG000234362
HOVERGEN:HBG063762 EMBL:BC119833 IPI:IPI00707917
RefSeq:NP_001069610.1 UniGene:Bt.40316 ProteinModelPortal:Q0VD51
PRIDE:Q0VD51 Ensembl:ENSBTAT00000014803 GeneID:539035
KEGG:bta:539035 CTD:11342 InParanoid:Q0VD51 KO:K15692 OMA:MGSNDID
OrthoDB:EOG41NTMB NextBio:20877737 Uniprot:Q0VD51
Length = 380
Score = 158 (60.7 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 67 HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
HR R+R+R + + +PV +F D D CA+CL ++++G+++R+LP C H +H
Sbjct: 211 HRAR--RNRLRKDQLKK--LPVHKFKKGD-EYDVCAICLDEYEDGDKLRILP-CSHAYHC 264
Query: 127 PCIDMWLS-SHSNCPLCR 143
C+D WL+ + CP+C+
Sbjct: 265 KCVDPWLTKTKKTCPVCK 282
>RGD|1594062 [details] [associations]
symbol:Rnf13 "ring finger protein 13" species:10116 "Rattus
norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;ISS] [GO:0005637
"nuclear inner membrane" evidence=IEA] [GO:0005765 "lysosomal
membrane" evidence=ISO;ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=ISO;ISS] [GO:0051865
"protein autoubiquitination" evidence=ISO;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 RGD:1594062 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0000139 GO:GO:0031902 GO:GO:0005765
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0051865
GO:GO:0005637 HOVERGEN:HBG063762 CTD:11342 KO:K15692 EMBL:BC081881
IPI:IPI00471874 RefSeq:NP_001102914.1 UniGene:Rn.17153
ProteinModelPortal:Q66HG0 GeneID:681578 KEGG:rno:681578
UCSC:RGD:1594062 NextBio:721179 Genevestigator:Q66HG0
Uniprot:Q66HG0
Length = 380
Score = 158 (60.7 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 67 HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
HR R+R+R + + +PV +F D D CA+CL ++++G+++R+LP C H +H
Sbjct: 211 HRNR--RNRLRKDQLKK--LPVHKFKKGD-EYDVCAICLEEYEDGDKLRILP-CSHAYHC 264
Query: 127 PCIDMWLS-SHSNCPLCR 143
C+D WL+ + CP+C+
Sbjct: 265 KCVDPWLTKTKKTCPVCK 282
>FB|FBgn0037944 [details] [associations]
symbol:CG6923 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:AE014297
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 KO:K10635 GeneTree:ENSGT00670000097625 EMBL:AY058520
EMBL:BT050479 RefSeq:NP_001247056.1 RefSeq:NP_650112.1
RefSeq:NP_731623.1 UniGene:Dm.7827 SMR:Q9VGI6 IntAct:Q9VGI6
MINT:MINT-885267 EnsemblMetazoa:FBtr0082432
EnsemblMetazoa:FBtr0082433 EnsemblMetazoa:FBtr0307892 GeneID:41420
KEGG:dme:Dmel_CG6923 UCSC:CG6923-RA FlyBase:FBgn0037944
InParanoid:Q9VGI6 OMA:PHRASAI OrthoDB:EOG4KWH7N GenomeRNAi:41420
NextBio:823770 Uniprot:Q9VGI6
Length = 1256
Score = 157 (60.3 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 31/78 (39%), Positives = 44/78 (56%)
Query: 88 VFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANAN 147
V R S D + + CA+CL F+ +VR LP C+HLFH C+D WL ++ +CP+CR +
Sbjct: 1174 VRRPSETDEDAEKCAICLNLFEIENEVRRLP-CMHLFHTDCVDQWLVTNKHCPICRVDIE 1232
Query: 148 AAPPPHLVLTLPDSGGAP 165
P + P S G P
Sbjct: 1233 THMPNDALP--PSSSGVP 1248
Score = 35 (17.4 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 9/39 (23%), Positives = 14/39 (35%)
Query: 32 ATYHCISLGXXXXXXXXXXXXXEPNTRQDTERNYDHRQE 70
AT+ S+ P+T D E+ RQ+
Sbjct: 373 ATHTTRSVDYGSRIGRRSAATGSPSTSSDQEQEQQQRQQ 411
>UNIPROTKB|Q90972 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0051865 "protein
autoubiquitination" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
Prosite:PS00518 GO:GO:0016021 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 GO:GO:0051865 HOGENOM:HOG000234362 HOVERGEN:HBG063762
CTD:11342 KO:K15692 EMBL:X95455 EMBL:AY787020 IPI:IPI00587571
RefSeq:NP_990686.1 UniGene:Gga.3523 ProteinModelPortal:Q90972
STRING:Q90972 PRIDE:Q90972 GeneID:396303 KEGG:gga:396303
InParanoid:Q90972 NextBio:20816353 Uniprot:Q90972
Length = 381
Score = 158 (60.7 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 67 HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
HR R+R+R + + +PV +F D D CA+CL ++++G+++R+LP C H +H
Sbjct: 211 HRAR--RNRLRKDQLKK--LPVHKFKKGD-EYDVCAICLDEYEDGDKLRILP-CSHAYHC 264
Query: 127 PCIDMWLS-SHSNCPLCR 143
C+D WL+ + CP+C+
Sbjct: 265 KCVDPWLTKTKKTCPVCK 282
>UNIPROTKB|E2QZ01 [details] [associations]
symbol:RNF13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 Ensembl:ENSCAFT00000013305 Uniprot:E2QZ01
Length = 381
Score = 158 (60.7 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 67 HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
HR R+R+R + + +PV +F D D CA+CL ++++G+++R+LP C H +H
Sbjct: 211 HRAR--RNRLRKDQLKK--LPVHKFKKGD-EYDVCAICLDEYEDGDKLRILP-CSHAYHC 264
Query: 127 PCIDMWLS-SHSNCPLCR 143
C+D WL+ + CP+C+
Sbjct: 265 KCVDPWLTKTKKTCPVCK 282
>UNIPROTKB|F6XCX3 [details] [associations]
symbol:RNF13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
CTD:11342 KO:K15692 OMA:MGSNDID Ensembl:ENSCAFT00000013305
EMBL:AAEX03013674 EMBL:AAEX03013676 EMBL:AAEX03013675
RefSeq:XP_534303.1 ProteinModelPortal:F6XCX3 GeneID:477109
KEGG:cfa:477109 Uniprot:F6XCX3
Length = 381
Score = 158 (60.7 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 67 HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
HR R+R+R + + +PV +F D D CA+CL ++++G+++R+LP C H +H
Sbjct: 211 HRAR--RNRLRKDQLKK--LPVHKFKKGD-EYDVCAICLDEYEDGDKLRILP-CSHAYHC 264
Query: 127 PCIDMWLS-SHSNCPLCR 143
C+D WL+ + CP+C+
Sbjct: 265 KCVDPWLTKTKKTCPVCK 282
>UNIPROTKB|O43567 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005637 "nuclear
inner membrane" evidence=IEA] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=ISS]
[GO:0031902 "late endosome membrane" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0000139 GO:GO:0031902 GO:GO:0005765
GO:GO:0005789 GO:GO:0046872 EMBL:CH471052 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
GO:GO:0051865 GO:GO:0005637 HOGENOM:HOG000234362 HOVERGEN:HBG063762
CTD:11342 KO:K15692 OMA:MGSNDID OrthoDB:EOG41NTMB EMBL:AF037204
EMBL:AF070558 EMBL:AK313304 EMBL:AK090638 EMBL:CR456804
EMBL:AC069216 EMBL:AC117395 EMBL:BC009803 EMBL:BC009781
IPI:IPI00151036 RefSeq:NP_009213.1 RefSeq:NP_899237.1
UniGene:Hs.12333 ProteinModelPortal:O43567 SMR:O43567 IntAct:O43567
STRING:O43567 PhosphoSite:O43567 PRIDE:O43567 DNASU:11342
Ensembl:ENST00000344229 Ensembl:ENST00000392894 GeneID:11342
KEGG:hsa:11342 UCSC:uc003exn.4 GeneCards:GC03P149531
HGNC:HGNC:10057 HPA:HPA008709 MIM:609247 neXtProt:NX_O43567
PharmGKB:PA34422 InParanoid:O43567 ChiTaRS:RNF13 GenomeRNAi:11342
NextBio:43096 ArrayExpress:O43567 Bgee:O43567 CleanEx:HS_RNF13
Genevestigator:O43567 GermOnline:ENSG00000082996 Uniprot:O43567
Length = 381
Score = 158 (60.7 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 67 HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
HR R+R+R + + +PV +F D D CA+CL ++++G+++R+LP C H +H
Sbjct: 211 HRAR--RNRLRKDQLKK--LPVHKFKKGD-EYDVCAICLDEYEDGDKLRILP-CSHAYHC 264
Query: 127 PCIDMWLS-SHSNCPLCR 143
C+D WL+ + CP+C+
Sbjct: 265 KCVDPWLTKTKKTCPVCK 282
>UNIPROTKB|Q5RCV8 [details] [associations]
symbol:RNF13 "E3 ubiquitin-protein ligase RNF13"
species:9601 "Pongo abelii" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0005765 "lysosomal membrane"
evidence=ISS] [GO:0031902 "late endosome membrane" evidence=ISS]
[GO:0051865 "protein autoubiquitination" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518 GO:GO:0016021
GO:GO:0000139 GO:GO:0031902 GO:GO:0005765 GO:GO:0005789
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0051865 GO:GO:0005637
HOVERGEN:HBG063762 CTD:11342 KO:K15692 EMBL:CR858160
RefSeq:NP_001125196.1 UniGene:Pab.18281 ProteinModelPortal:Q5RCV8
SMR:Q5RCV8 PRIDE:Q5RCV8 GeneID:100172087 KEGG:pon:100172087
Uniprot:Q5RCV8
Length = 381
Score = 158 (60.7 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 67 HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
HR R+R+R + + +PV +F D D CA+CL ++++G+++R+LP C H +H
Sbjct: 211 HRAR--RNRLRKDQLKK--LPVHKFKKGD-EYDVCAICLDEYEDGDKLRILP-CSHAYHC 264
Query: 127 PCIDMWLS-SHSNCPLCR 143
C+D WL+ + CP+C+
Sbjct: 265 KCVDPWLTKTKKTCPVCK 282
>MGI|MGI:1346341 [details] [associations]
symbol:Rnf13 "ring finger protein 13" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005765 "lysosomal membrane" evidence=IDA] [GO:0005768
"endosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051865 "protein
autoubiquitination" evidence=IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 MGI:MGI:1346341 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005829 GO:GO:0031902 GO:GO:0005765
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0051865 GO:GO:0005637 EMBL:CH466530
GeneTree:ENSGT00700000104226 HOGENOM:HOG000234362
HOVERGEN:HBG063762 CTD:11342 KO:K15692 OMA:MGSNDID
OrthoDB:EOG41NTMB EMBL:AF037205 EMBL:AF037206 EMBL:AK158046
EMBL:BC058182 IPI:IPI00119961 IPI:IPI00420831 RefSeq:NP_001106884.1
RefSeq:NP_036013.1 UniGene:Mm.274360 ProteinModelPortal:O54965
SMR:O54965 PhosphoSite:O54965 PRIDE:O54965
Ensembl:ENSMUST00000041826 GeneID:24017 KEGG:mmu:24017
eggNOG:NOG260066 InParanoid:Q6PEA8 NextBio:303955 Bgee:O54965
CleanEx:MM_RNF13 Genevestigator:O54965
GermOnline:ENSMUSG00000036503 Uniprot:O54965
Length = 381
Score = 158 (60.7 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 28/78 (35%), Positives = 49/78 (62%)
Query: 67 HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
HR R+R+R + + +PV +F D D CA+CL ++++G+++R+LP C H +H
Sbjct: 211 HRNR--RNRLRKDQLKK--LPVHKFKKGD-EYDVCAICLEEYEDGDKLRILP-CSHAYHC 264
Query: 127 PCIDMWLS-SHSNCPLCR 143
C+D WL+ + CP+C+
Sbjct: 265 KCVDPWLTKTKKTCPVCK 282
>UNIPROTKB|J3KN31 [details] [associations]
symbol:RNF130 "E3 ubiquitin-protein ligase RNF130"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CH471165
UniGene:Hs.484363 HGNC:HGNC:18280 ChiTaRS:RNF130 EMBL:AC010285
EMBL:AC026413 EMBL:AC122713 ProteinModelPortal:J3KN31
Ensembl:ENST00000261947 Uniprot:J3KN31
Length = 384
Score = 158 (60.7 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
D + D CAVC+ +K+ + VR+LP C H+FH C+D WLS H CP+C+ N
Sbjct: 258 DPDFDHCAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCKLN 307
>RGD|1305972 [details] [associations]
symbol:Rnf167 "ring finger protein 167" species:10116 "Rattus
norvegicus" [GO:0000209 "protein polyubiquitination"
evidence=IEA;ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0012505
"endomembrane system" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0045786 "negative regulation of cell
cycle" evidence=IEA;ISO] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 RGD:1305972 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0012505 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GO:GO:0004842 GO:GO:0000209 GO:GO:0045786
GeneTree:ENSGT00700000104226 CTD:26001 HOGENOM:HOG000234362
HOVERGEN:HBG063762 KO:K15706 OrthoDB:EOG4QJRP0 OMA:DSWLTSW
EMBL:BC083670 IPI:IPI00202851 RefSeq:NP_001008362.1
UniGene:Rn.26488 ProteinModelPortal:Q5XIL0 PRIDE:Q5XIL0
Ensembl:ENSRNOT00000005242 GeneID:360554 KEGG:rno:360554
UCSC:RGD:1305972 InParanoid:Q5XIL0 NextBio:673199
Genevestigator:Q5XIL0 GermOnline:ENSRNOG00000003879 Uniprot:Q5XIL0
Length = 349
Score = 157 (60.3 bits), Expect = 6.9e-11, P = 6.9e-11
Identities = 27/89 (30%), Positives = 50/89 (56%)
Query: 63 RNYDHRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLH 122
R HR+ R+R+ + ++ P + D D CA+CL ++++G+++R+LP C H
Sbjct: 195 RCIQHRKRLQRNRLTKEQLKQI--PTHDYQKGD-EYDVCAICLDEYEDGDKLRILP-CAH 250
Query: 123 LFHVPCIDMWLS-SHSNCPLCRANANAAP 150
+H C+D WL+ + CP+C+ + P
Sbjct: 251 AYHSRCVDPWLTQTRKTCPICKQPVHRGP 279
>TAIR|locus:2010489 [details] [associations]
symbol:AT1G28040 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
EMBL:AC069471 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:DQ446294 IPI:IPI00537933 PIR:A86406 RefSeq:NP_174125.2
UniGene:At.51800 ProteinModelPortal:Q9C7E9 SMR:Q9C7E9 PaxDb:Q9C7E9
PRIDE:Q9C7E9 EnsemblPlants:AT1G28040.1 GeneID:839697
KEGG:ath:AT1G28040 TAIR:At1g28040 eggNOG:NOG239898
HOGENOM:HOG000006156 InParanoid:Q9C7E9 OMA:QSTIESY PhylomeDB:Q9C7E9
ProtClustDB:CLSN2920235 Genevestigator:Q9C7E9 Uniprot:Q9C7E9
Length = 299
Score = 155 (59.6 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 24/43 (55%), Positives = 30/43 (69%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
C +CL ++ E VR +PEC H FHV CID WL HS+CP+CR
Sbjct: 253 CPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCR 295
>TAIR|locus:2120963 [details] [associations]
symbol:AT4G38140 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0031225
"anchored to membrane" evidence=TAS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0031225 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL035538
EMBL:AL161593 EMBL:BT030074 IPI:IPI00538986 PIR:T05641
RefSeq:NP_195527.1 UniGene:At.64216 ProteinModelPortal:Q9SZL4
SMR:Q9SZL4 PaxDb:Q9SZL4 EnsemblPlants:AT4G38140.1 GeneID:829970
KEGG:ath:AT4G38140 TAIR:At4g38140 eggNOG:NOG278117
HOGENOM:HOG000034173 InParanoid:Q9SZL4 OMA:HINCIEP PhylomeDB:Q9SZL4
ProtClustDB:CLSN2915825 Genevestigator:Q9SZL4 Uniprot:Q9SZL4
Length = 145
Score = 151 (58.2 bits), Expect = 7.4e-11, P = 7.4e-11
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 91 FSSKDCNEDTCA-VCLGDFKEGEQVRVLPECLHLFHVPCIDMWL-SSHSNCPLCRANANA 148
F K+ E+ C +CL +F+ + V LP C HLFH+ CI+ WL H CPLCR+ A
Sbjct: 51 FGDKEKEEEICCPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCRSFVLA 110
Query: 149 APPP 152
PP
Sbjct: 111 PTPP 114
>UNIPROTKB|F1MIY9 [details] [associations]
symbol:RNF130 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0012501 "programmed cell death" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0012501 GeneTree:ENSGT00700000104211
OMA:PLRTSGM EMBL:DAAA02018962 EMBL:DAAA02018963 EMBL:DAAA02018964
EMBL:DAAA02018965 IPI:IPI00687594 Ensembl:ENSBTAT00000006384
ArrayExpress:F1MIY9 Uniprot:F1MIY9
Length = 418
Score = 158 (60.7 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
D + D CAVC+ +K+ + VR+LP C H+FH C+D WLS H CP+C+ N
Sbjct: 257 DPDFDHCAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCKLN 306
>UNIPROTKB|E5RI87 [details] [associations]
symbol:RNF130 "E3 ubiquitin-protein ligase RNF130"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HGNC:HGNC:18280 ChiTaRS:RNF130
EMBL:AC010285 EMBL:AC026413 EMBL:AC122713 IPI:IPI00982148
ProteinModelPortal:E5RI87 SMR:E5RI87 Ensembl:ENST00000522208
OMA:MELPDIQ ArrayExpress:E5RI87 Bgee:E5RI87 Uniprot:E5RI87
Length = 419
Score = 158 (60.7 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
D + D CAVC+ +K+ + VR+LP C H+FH C+D WLS H CP+C+ N
Sbjct: 258 DPDFDHCAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCKLN 307
>UNIPROTKB|Q86XS8 [details] [associations]
symbol:RNF130 "E3 ubiquitin-protein ligase RNF130"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0012501
"programmed cell death" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 InterPro:IPR003137 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0005634 GO:GO:0005737 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 eggNOG:NOG302028 GO:GO:0012501 EMBL:AY083998
EMBL:BC017100 EMBL:BC065244 EMBL:BC082267 EMBL:BC108306
EMBL:AF155650 IPI:IPI00183643 RefSeq:NP_060904.2 UniGene:Hs.484363
ProteinModelPortal:Q86XS8 SMR:Q86XS8 IntAct:Q86XS8
MINT:MINT-1388856 STRING:Q86XS8 PhosphoSite:Q86XS8 DMDM:56749089
PRIDE:Q86XS8 Ensembl:ENST00000520911 Ensembl:ENST00000521389
GeneID:55819 KEGG:hsa:55819 UCSC:uc003mll.1 CTD:55819
GeneCards:GC05M179345 HGNC:HGNC:18280 HPA:HPA014499
neXtProt:NX_Q86XS8 PharmGKB:PA134871556 HOGENOM:HOG000231432
HOVERGEN:HBG057659 InParanoid:Q86XS8 KO:K15701 OrthoDB:EOG40VVQ5
PhylomeDB:Q86XS8 ChiTaRS:RNF130 GenomeRNAi:55819 NextBio:61006
ArrayExpress:Q86XS8 Bgee:Q86XS8 CleanEx:HS_RNF130
Genevestigator:Q86XS8 GermOnline:ENSG00000113269 Uniprot:Q86XS8
Length = 419
Score = 158 (60.7 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
D + D CAVC+ +K+ + VR+LP C H+FH C+D WLS H CP+C+ N
Sbjct: 258 DPDFDHCAVCIESYKQNDVVRILP-CKHVFHKSCVDPWLSEHCTCPMCKLN 307
>UNIPROTKB|F1RRE9 [details] [associations]
symbol:RNF150 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104211 OMA:KFAAPTH EMBL:FP565236
Ensembl:ENSSSCT00000009917 Uniprot:F1RRE9
Length = 269
Score = 153 (58.9 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 99 DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN---ANAAPP 151
D CAVC+ +K + VR+LP C HLFH C+D WL H CP+C+ N A PP
Sbjct: 107 DNCAVCIEGYKPNDVVRILP-CRHLFHKSCVDPWLLDHRTCPMCKMNILKALGIPP 161
>UNIPROTKB|E1C3B7 [details] [associations]
symbol:RNF130 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0012501 "programmed cell death" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0012501 GeneTree:ENSGT00700000104211
OMA:PLRTSGM EMBL:AADN02028617 EMBL:AADN02028618 IPI:IPI00574173
ProteinModelPortal:E1C3B7 Ensembl:ENSGALT00000009349
NextBio:20819763 Uniprot:E1C3B7
Length = 425
Score = 158 (60.7 bits), Expect = 8.4e-11, P = 8.4e-11
Identities = 25/51 (49%), Positives = 35/51 (68%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
D + D CAVC+ +K+ + VR+LP C H+FH C+D WLS H CP+C+ N
Sbjct: 264 DPDFDHCAVCIESYKQNDVVRILP-CKHVFHKACVDPWLSEHCTCPMCKLN 313
>UNIPROTKB|I3LG86 [details] [associations]
symbol:RNF13 "Ring finger protein 13" species:9823 "Sus
scrofa" [GO:0051865 "protein autoubiquitination" evidence=IEA]
[GO:0031902 "late endosome membrane" evidence=IEA] [GO:0005765
"lysosomal membrane" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 GO:GO:0031902
GO:GO:0005765 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0051865
GeneTree:ENSGT00700000104226 CTD:11342 KO:K15692 OMA:MGSNDID
EMBL:FP312790 EMBL:CU915458 EMBL:GACC01000242 RefSeq:XP_003358656.2
Ensembl:ENSSSCT00000022374 GeneID:100621829 KEGG:ssc:100621829
Uniprot:I3LG86
Length = 381
Score = 157 (60.3 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 27/78 (34%), Positives = 49/78 (62%)
Query: 67 HRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHV 126
HR R+R+R + + +P+ +F D D CA+CL ++++G+++R+LP C H +H
Sbjct: 211 HRAR--RNRLRKDQLKK--LPIHKFKKGD-EYDVCAICLDEYEDGDKLRILP-CSHAYHC 264
Query: 127 PCIDMWLS-SHSNCPLCR 143
C+D WL+ + CP+C+
Sbjct: 265 KCVDPWLTKTKKTCPVCK 282
>RGD|621856 [details] [associations]
symbol:Rnf38 "ring finger protein 38" species:10116 "Rattus
norvegicus" [GO:0005515 "protein binding" evidence=IPI] [GO:0007286
"spermatid development" evidence=NAS] [GO:0008584 "male gonad
development" evidence=IEP] [GO:0036126 "sperm flagellum"
evidence=IDA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:621856 GO:GO:0019861 GO:GO:0007286 GO:GO:0046872
GO:GO:0008270 GO:GO:0008584 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 CTD:152006 HOVERGEN:HBG059283 IPI:IPI00758440
UniGene:Rn.82699 EMBL:AF480444 RefSeq:NP_604462.1
ProteinModelPortal:Q8R4E3 SMR:Q8R4E3 STRING:Q8R4E3
PhosphoSite:Q8R4E3 GeneID:171501 KEGG:rno:171501 UCSC:RGD:621856
InParanoid:Q8R4E3 NextBio:622473 Genevestigator:Q8R4E3
Uniprot:Q8R4E3
Length = 432
Score = 158 (60.7 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 86 MPVFRFS-SKDCNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ S +E T C VC+ DF+ + +RVLP C H FH C+D WL + CP+CR
Sbjct: 363 LPFYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKGNRTCPICR 421
Query: 144 ANAN 147
A+A+
Sbjct: 422 ADAS 425
>UNIPROTKB|E1B8N1 [details] [associations]
symbol:LOC521092 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:DAAA02073830 IPI:IPI00696540
Ensembl:ENSBTAT00000026322 OMA:PICITEY Uniprot:E1B8N1
Length = 621
Score = 160 (61.4 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 86 MPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRA 144
+P+ F KD + TC +C+ ++ G +R+LP C H +H CID WL H NCP+CRA
Sbjct: 553 LPLRFFEEKDAAK-TCPICITEYTTGNMLRILP-CSHEYHYQCIDQWLEEHPNCPICRA 609
>UNIPROTKB|Q5XIX1 [details] [associations]
symbol:Rnf38 "Rnf38 protein" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:621856 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5540 EMBL:CH473962
GeneTree:ENSGT00670000097625 HOGENOM:HOG000231638
HOVERGEN:HBG059283 OrthoDB:EOG4TB4B7 EMBL:BC083548 IPI:IPI00758440
UniGene:Rn.82699 SMR:Q5XIX1 STRING:Q5XIX1
Ensembl:ENSRNOT00000060203 InParanoid:Q5XIX1 Genevestigator:Q5XIX1
Uniprot:Q5XIX1
Length = 432
Score = 157 (60.3 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 86 MPVFRFS-SKDCNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ S +E T C VC+ DF+ + +RVLP C H FH C+D WL + CP+CR
Sbjct: 363 LPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKGNRTCPICR 421
Query: 144 ANAN 147
A+A+
Sbjct: 422 ADAS 425
>UNIPROTKB|F1PCH2 [details] [associations]
symbol:RNF126 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 OMA:GQNTATD EMBL:AAEX03012674
Ensembl:ENSCAFT00000031336 Uniprot:F1PCH2
Length = 305
Score = 136 (52.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 28/58 (48%), Positives = 33/58 (56%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANAN----AAPPPHL 154
C VC D+ GE+VR LP C HLFH CI WL H +CP+CR + A PP L
Sbjct: 208 CPVCKDDYGLGERVRQLP-CSHLFHDGCIVPWLQQHDSCPVCRKSLTGQNTATNPPGL 264
Score = 36 (17.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 54 EPNTRQDTERNYDHRQ--EWPRDRI 76
+P +R++ E++ HR PR R+
Sbjct: 84 DPESRREREQHSRHRYGARQPRARL 108
>UNIPROTKB|F1ND85 [details] [associations]
symbol:RNF215 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063291 EMBL:AADN02050497 EMBL:AADN02050498
IPI:IPI00915203 Ensembl:ENSGALT00000038167 Uniprot:F1ND85
Length = 233
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 93 SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
S+ C D+CAVCL F + + +RVLP C H FH C+D WL CPLC+ N
Sbjct: 173 SRACEIDSCAVCLDQFSKSQWLRVLP-CSHEFHRDCVDPWLLLQQTCPLCKHN 224
>UNIPROTKB|G3MWN3 [details] [associations]
symbol:G3MWN3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:DAAA02001065
Ensembl:ENSBTAT00000064904 Uniprot:G3MWN3
Length = 136
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 28/58 (48%), Positives = 36/58 (62%)
Query: 96 CNEDT--CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP 151
C T CAVCL D G+ +R LP C H++H+ CI+ WL+ CPLCR A+AA P
Sbjct: 75 CETKTTECAVCLMDLVPGDLIRPLP-CKHVYHLDCINQWLTRSFTCPLCRGPADAAQP 131
>TAIR|locus:2053225 [details] [associations]
symbol:AT2G28920 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC005727
EMBL:BT030073 IPI:IPI00534079 PIR:E84690 RefSeq:NP_180458.1
UniGene:At.52958 ProteinModelPortal:Q9ZV22 SMR:Q9ZV22 PaxDb:Q9ZV22
EnsemblPlants:AT2G28920.1 GeneID:817441 KEGG:ath:AT2G28920
TAIR:At2g28920 eggNOG:NOG317926 HOGENOM:HOG000154045
InParanoid:Q9ZV22 OMA:ICRAPFQ PhylomeDB:Q9ZV22
ProtClustDB:CLSN2913203 Genevestigator:Q9ZV22 Uniprot:Q9ZV22
Length = 145
Score = 149 (57.5 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 25/46 (54%), Positives = 29/46 (63%)
Query: 99 DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRA 144
D C +CL DFK + VRVL C H+FHV CID W CP+CRA
Sbjct: 91 DVCVICLEDFKVNDVVRVLVRCKHVFHVDCIDSWCFYKLTCPICRA 136
>UNIPROTKB|F1LNX1 [details] [associations]
symbol:Rnf38 "Protein Rnf38" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:621856 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00949289 Ensembl:ENSRNOT00000060201
ArrayExpress:F1LNX1 Uniprot:F1LNX1
Length = 464
Score = 157 (60.3 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 86 MPVFRFS-SKDCNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ S +E T C VC+ DF+ + +RVLP C H FH C+D WL + CP+CR
Sbjct: 395 LPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKGNRTCPICR 453
Query: 144 ANAN 147
A+A+
Sbjct: 454 ADAS 457
>UNIPROTKB|J9JHQ4 [details] [associations]
symbol:RNF150 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104211
EMBL:AAEX03011705 EMBL:AAEX03011706 EMBL:AAEX03011707
Ensembl:ENSCAFT00000043654 Uniprot:J9JHQ4
Length = 310
Score = 153 (58.9 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 99 DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN---ANAAPP 151
D CAVC+ +K + VR+LP C HLFH C+D WL H CP+C+ N A PP
Sbjct: 185 DNCAVCIEGYKPNDVVRILP-CRHLFHKSCVDPWLLDHRTCPMCKMNILKALGIPP 239
>TAIR|locus:2050522 [details] [associations]
symbol:AT2G44330 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GO:GO:0004842 EMBL:AC004521 EMBL:AY074627 EMBL:DQ086854
IPI:IPI00534529 PIR:T02388 RefSeq:NP_181961.1 UniGene:At.28780
ProteinModelPortal:O64867 SMR:O64867 EnsemblPlants:AT2G44330.1
GeneID:819040 KEGG:ath:AT2G44330 TAIR:At2g44330 eggNOG:NOG328670
HOGENOM:HOG000115003 InParanoid:O64867 OMA:QTYWCHE PhylomeDB:O64867
ProtClustDB:CLSN2912974 ArrayExpress:O64867 Genevestigator:O64867
Uniprot:O64867
Length = 180
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 74 DRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWL 133
D + + +++ + +S D + CA+C DF GE R LP C HL+H CI WL
Sbjct: 69 DPMESLPTIKISSSMLSSASSDDSALPCAICREDFVVGESARRLP-CNHLYHNDCIIPWL 127
Query: 134 SSHSNCPLCRANANAA 149
+SH++CPLCR A
Sbjct: 128 TSHNSCPLCRVELPVA 143
>TAIR|locus:2055435 [details] [associations]
symbol:AT2G34000 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC002341
EMBL:DQ059092 EMBL:BT029341 IPI:IPI00544559 PIR:B84751
RefSeq:NP_180947.1 UniGene:At.53025 ProteinModelPortal:O22953
SMR:O22953 PRIDE:O22953 EnsemblPlants:AT2G34000.1 GeneID:817961
KEGG:ath:AT2G34000 TAIR:At2g34000 eggNOG:NOG251402
HOGENOM:HOG000114083 InParanoid:O22953 OMA:WLESHAT PhylomeDB:O22953
ProtClustDB:CLSN2913116 Genevestigator:O22953 Uniprot:O22953
Length = 151
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 33/90 (36%), Positives = 49/90 (54%)
Query: 60 DTERNYDHRQEWPRDRIRTSSVMRVLMPVFRF----SSKDCN--EDTCAVCLGDFKEGEQ 113
+TE R+E PR + ++SV+ P F + + + N E C VCLG +
Sbjct: 46 ETENENQGRRE-PRCQGLSASVIAAF-PTFSYKPDNNDPESNNQEIECPVCLGLIPKNVV 103
Query: 114 VRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
++VLP C+H+F CI WL SH+ CP+CR
Sbjct: 104 IKVLPNCMHMFDEECIGKWLESHATCPVCR 133
>TAIR|locus:2165735 [details] [associations]
symbol:AT5G42200 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 EMBL:AB017067
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
HOGENOM:HOG000237642 EMBL:DQ086857 EMBL:BT003837 EMBL:BT005191
EMBL:AY088186 IPI:IPI00527533 RefSeq:NP_199035.1 UniGene:At.43326
UniGene:At.75664 ProteinModelPortal:Q8L9W3 SMR:Q8L9W3
EnsemblPlants:AT5G42200.1 GeneID:834225 KEGG:ath:AT5G42200
TAIR:At5g42200 eggNOG:NOG261446 InParanoid:Q8L9W3 OMA:LVPGCNH
PhylomeDB:Q8L9W3 ProtClustDB:CLSN2686448 Genevestigator:Q8L9W3
GermOnline:AT5G42200 Uniprot:Q8L9W3
Length = 163
Score = 148 (57.2 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRA 144
CAVCL D + G+ R++P C H FH C D WLS+H+ CP+CRA
Sbjct: 104 CAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCPVCRA 147
>ZFIN|ZDB-GENE-060929-604 [details] [associations]
symbol:rnf44 "ring finger protein 44" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-060929-604 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GeneTree:ENSGT00670000097625 HOGENOM:HOG000231638
HOVERGEN:HBG059283 EMBL:BC124246 IPI:IPI00801239
RefSeq:NP_001070092.1 UniGene:Dr.72465 ProteinModelPortal:Q08CG8
SMR:Q08CG8 Ensembl:ENSDART00000099235 GeneID:767686 KEGG:dre:767686
CTD:22838 InParanoid:Q08CG8 OMA:CSAQQLP OrthoDB:EOG498V0T
NextBio:20918075 ArrayExpress:Q08CG8 Bgee:Q08CG8 Uniprot:Q08CG8
Length = 448
Score = 156 (60.0 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 86 MPVFRFSSKDC-NEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ ++ +E T C VC DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 379 LPSYRFNLENHQSEQTLCVVCFSDFESRQLLRVLP-CNHEFHAKCVDKWLKTNRTCPICR 437
Query: 144 ANAN 147
A+A+
Sbjct: 438 ADAS 441
>UNIPROTKB|F1LPR4 [details] [associations]
symbol:Rnf38 "Protein Rnf38" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:621856 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 OMA:FLLHPPH IPI:IPI00776878
Ensembl:ENSRNOT00000018863 ArrayExpress:F1LPR4 Uniprot:F1LPR4
Length = 517
Score = 157 (60.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 86 MPVFRFS-SKDCNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ S +E T C VC+ DF+ + +RVLP C H FH C+D WL + CP+CR
Sbjct: 448 LPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKGNRTCPICR 506
Query: 144 ANAN 147
A+A+
Sbjct: 507 ADAS 510
>MGI|MGI:1920719 [details] [associations]
symbol:Rnf38 "ring finger protein 38" species:10090 "Mus
musculus" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0036126 "sperm flagellum"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
MGI:MGI:1920719 Prosite:PS00518 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
GeneTree:ENSGT00670000097625 CTD:152006 HOGENOM:HOG000231638
HOVERGEN:HBG059283 OMA:FLLHPPH ChiTaRS:RNF38 EMBL:AK029650
EMBL:BC060730 EMBL:BC062976 IPI:IPI00221948 IPI:IPI00515598
RefSeq:NP_780410.2 UniGene:Mm.262859 ProteinModelPortal:Q8BI21
SMR:Q8BI21 PhosphoSite:Q8BI21 PRIDE:Q8BI21
Ensembl:ENSMUST00000098098 GeneID:73469 KEGG:mmu:73469
InParanoid:Q8BI21 NextBio:338343 Bgee:Q8BI21 CleanEx:MM_RNF38
Genevestigator:Q8BI21 GermOnline:ENSMUSG00000035696 Uniprot:Q8BI21
Length = 518
Score = 157 (60.3 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 86 MPVFRFS-SKDCNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ S +E T C VC+ DF+ + +RVLP C H FH C+D WL + CP+CR
Sbjct: 449 LPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKGNRTCPICR 507
Query: 144 ANAN 147
A+A+
Sbjct: 508 ADAS 511
>FB|FBgn0004919 [details] [associations]
symbol:gol "goliath" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0007498 "mesoderm
development" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF00097 Pfam:PF02225
Prosite:PS00518 EMBL:AE013599 GO:GO:0016021 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0001707 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:NOG302028 ChiTaRS:OSTM1 EMBL:AY069169 EMBL:M97204 PIR:JC1495
RefSeq:NP_001163300.1 RefSeq:NP_001246517.1 RefSeq:NP_523864.3
RefSeq:NP_726508.1 UniGene:Dm.19312 ProteinModelPortal:Q06003
SMR:Q06003 EnsemblMetazoa:FBtr0072459 GeneID:38006
KEGG:dme:Dmel_CG2679 UCSC:CG2679-RB CTD:38006 FlyBase:FBgn0004919
GeneTree:ENSGT00700000104211 HOGENOM:HOG000238978 InParanoid:Q06003
OMA:DKEIDND OrthoDB:EOG4CJSZ6 PhylomeDB:Q06003 GenomeRNAi:38006
NextBio:806511 Bgee:Q06003 GermOnline:CG2679 Uniprot:Q06003
Length = 461
Score = 156 (60.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 76 IRTSSVMRVLMPVFRFSS-KDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLS 134
+ ++M++ +FS KD + D CA+C+ +K + +R+LP C H FH CID WL
Sbjct: 277 VTKKAIMKIPTKTGKFSDEKDLDSDCCAICIEAYKPTDTIRILP-CKHEFHKNCIDPWLI 335
Query: 135 SHSNCPLCR 143
H CP+C+
Sbjct: 336 EHRTCPMCK 344
>UNIPROTKB|Q0II22 [details] [associations]
symbol:RNF126 "RING finger protein 126" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00530000062967 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 EMBL:BC122844
IPI:IPI00689343 RefSeq:NP_001068782.1 UniGene:Bt.6132
ProteinModelPortal:Q0II22 SMR:Q0II22 PRIDE:Q0II22
Ensembl:ENSBTAT00000019080 GeneID:507447 KEGG:bta:507447 CTD:55658
InParanoid:Q0II22 OMA:GQNTATD OrthoDB:EOG4VQ9PZ NextBio:20868062
Uniprot:Q0II22
Length = 313
Score = 135 (52.6 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 28/58 (48%), Positives = 32/58 (55%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANAN----AAPPPHL 154
C VC D+ GE VR LP C HLFH CI WL H +CP+CR + A PP L
Sbjct: 232 CPVCKDDYGLGEHVRQLP-CNHLFHDGCIVPWLEQHDSCPVCRKSLTGQNTATDPPGL 288
Score = 36 (17.7 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 8/25 (32%), Positives = 15/25 (60%)
Query: 54 EPNTRQDTERNYDHRQ--EWPRDRI 76
+P +R++ E++ HR PR R+
Sbjct: 108 DPESRREREQHSRHRYGARQPRARL 132
>TAIR|locus:2156872 [details] [associations]
symbol:RMR1 "receptor homology region transmembrane
domain ring H2 motif protein 1" species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008233
"peptidase activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0000306 "extrinsic to vacuolar membrane"
evidence=IDA] [GO:0006886 "intracellular protein transport"
evidence=IDA] [GO:0006869 "lipid transport" evidence=RCA]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=RCA]
[GO:0009744 "response to sucrose stimulus" evidence=RCA]
[GO:0009750 "response to fructose stimulus" evidence=RCA]
[GO:0010351 "lithium ion transport" evidence=RCA] [GO:0016558
"protein import into peroxisome matrix" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 EMBL:CP002688 GO:GO:0006886
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AB011474 GO:GO:0000306 KO:K15692 UniGene:At.24500
HOGENOM:HOG000242534 EMBL:AF218807 EMBL:AY035089 EMBL:AY051036
IPI:IPI00521373 RefSeq:NP_201417.1 UniGene:At.67847 UniGene:At.9220
ProteinModelPortal:Q9M622 SMR:Q9M622 EnsemblPlants:AT5G66160.1
GeneID:836748 KEGG:ath:AT5G66160 TAIR:At5g66160 InParanoid:Q9M622
OMA:EDYKDGE PhylomeDB:Q9M622 ProtClustDB:CLSN2686674
ArrayExpress:Q9M622 Genevestigator:Q9M622 Uniprot:Q9M622
Length = 310
Score = 152 (58.6 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 67 HRQEWPRDR----IRTSSVMRVLMPVFRFSSKDCNE--DTCAVCLGDFKEGEQVRVLPEC 120
H +W R R IR + + +P F F+ ++ +TCA+CL D++ GE +R+LP C
Sbjct: 193 HWTQW-RGRHTRTIRLDAKLVHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLP-C 250
Query: 121 LHLFHVPCIDMWLSSH-SNCPLCR 143
H FH+ CID WL+ ++CP+C+
Sbjct: 251 QHAFHLNCIDSWLTKWGTSCPVCK 274
>ZFIN|ZDB-GENE-030131-8693 [details] [associations]
symbol:si:dkey-20n3.1 "si:dkey-20n3.1"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-030131-8693 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00670000097625
EMBL:CR936846 IPI:IPI00511731 RefSeq:XP_695200.4 UniGene:Dr.159457
UniGene:Dr.76333 Ensembl:ENSDART00000089233
Ensembl:ENSDART00000139241 GeneID:566820 KEGG:dre:566820
NextBio:20888388 Uniprot:E7FDX7
Length = 673
Score = 158 (60.7 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 86 MPVFRFS-SKDCNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ S +E T C VC+ DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 604 LPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 662
Query: 144 ANAN 147
A+A+
Sbjct: 663 ADAS 666
>UNIPROTKB|Q3SZS9 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 GeneTree:ENSGT00670000097625 CTD:152006
HOGENOM:HOG000231638 HOVERGEN:HBG059283 OMA:FLLHPPH
OrthoDB:EOG4TB4B7 EMBL:DAAA02023138 EMBL:BC102724 IPI:IPI00686553
RefSeq:NP_001029753.1 UniGene:Bt.4320 SMR:Q3SZS9
Ensembl:ENSBTAT00000007260 GeneID:532877 KEGG:bta:532877
InParanoid:Q3SZS9 NextBio:20875836 Uniprot:Q3SZS9
Length = 432
Score = 155 (59.6 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 86 MPVFRFSSKDC-NEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ + +E T C VC+ DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 363 LPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 421
Query: 144 ANAN 147
A+A+
Sbjct: 422 ADAS 425
>UNIPROTKB|F1PLL1 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 CTD:152006 OMA:FLLHPPH
EMBL:AAEX03007963 RefSeq:XP_866889.1 Ensembl:ENSCAFT00000003636
GeneID:474766 KEGG:cfa:474766 Uniprot:F1PLL1
Length = 432
Score = 155 (59.6 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 86 MPVFRFSSKDC-NEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ + +E T C VC+ DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 363 LPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 421
Query: 144 ANAN 147
A+A+
Sbjct: 422 ADAS 425
>UNIPROTKB|B1AM81 [details] [associations]
symbol:RNF38 "RING finger protein 38" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL161792 EMBL:AL354935 UniGene:Hs.333503 HGNC:HGNC:18052
HOGENOM:HOG000231638 HOVERGEN:HBG059283 ChiTaRS:RNF38
IPI:IPI00744793 SMR:B1AM81 Ensembl:ENST00000377870
Ensembl:ENST00000377877 UCSC:uc003zzl.3 Uniprot:B1AM81
Length = 439
Score = 155 (59.6 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 86 MPVFRFSSKDC-NEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ + +E T C VC+ DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 370 LPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 428
Query: 144 ANAN 147
A+A+
Sbjct: 429 ADAS 432
>TAIR|locus:4515102735 [details] [associations]
symbol:AT1G67856 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 EMBL:AC012563 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00891607 RefSeq:NP_001117565.1 UniGene:At.66117
UniGene:At.70659 ProteinModelPortal:B3H543 SMR:B3H543
EnsemblPlants:AT1G67856.1 GeneID:6240476 KEGG:ath:AT1G67856
TAIR:At1g67856 eggNOG:NOG324400 HOGENOM:HOG000242879 KO:K16285
OMA:VSELSCK PhylomeDB:B3H543 ProtClustDB:CLSN2681281
Genevestigator:B3H543 Uniprot:B3H543
Length = 133
Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 38/123 (30%), Positives = 55/123 (44%)
Query: 23 GVIAGFMMVATYHCISLGXXXXXXXXXXXXXEPNTRQDTERNYDHRQEWPRDRIRTSSVM 82
GV+ +++ T +SL E N ++ E + DH R RI +
Sbjct: 12 GVMP-MLVMNTVVSVSLVKNMVRSVVNMVSSETNEARNKEDDQDHEDSKRRRRISITHFE 70
Query: 83 RVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWL-SSHSNCPL 141
+ R S + C VCL FKE E+V L C H FH C+D W ++H+ CPL
Sbjct: 71 SLCEN--RGSRNEREAMDCCVCLCGFKEEEEVSELVSCKHYFHSACLDKWFGNNHTTCPL 128
Query: 142 CRA 144
CR+
Sbjct: 129 CRS 131
>UNIPROTKB|I3LHE1 [details] [associations]
symbol:RNF6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0085020 "protein K6-linked ubiquitination"
evidence=IEA] [GO:0070936 "protein K48-linked ubiquitination"
evidence=IEA] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0050681 "androgen receptor
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044314 "protein
K27-linked ubiquitination" evidence=IEA] [GO:0030517 "negative
regulation of axon extension" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005737 GO:GO:0045893 GO:GO:0046872 GO:GO:0003677
GO:GO:0016605 GO:GO:0030424 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0004842 GO:GO:0060765
GO:GO:0070936 GO:GO:0085020 GO:GO:0030517 GO:GO:0044314
GeneTree:ENSGT00700000104290 EMBL:FP565336
Ensembl:ENSSSCT00000024194 OMA:ISRDHTR Uniprot:I3LHE1
Length = 578
Score = 145 (56.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 89 FRFSSKDCN-EDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+ S +D + C+VC+ D+ G ++R LP C+H FH+ CID WLS + CP+CR
Sbjct: 512 YEHSGRDSDLARICSVCISDYVTGNKLRQLP-CMHEFHIHCIDRWLSENCTCPICR 566
Score = 34 (17.0 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 5/24 (20%), Positives = 16/24 (66%)
Query: 54 EPNTRQDTERNYDHRQEWPRDRIR 77
E ++ +D + + ++ + W ++R+R
Sbjct: 27 EESSSRD-QNHQENERRWQQERLR 49
>UNIPROTKB|F1NND0 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FLLHPPH EMBL:AADN02065332
IPI:IPI00598802 Ensembl:ENSGALT00000024714 Uniprot:F1NND0
Length = 459
Score = 155 (59.6 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 86 MPVFRFSSKDC-NEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ + +E T C VC+ DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 392 LPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 450
Query: 144 ANAN 147
A+A+
Sbjct: 451 ADAS 454
>FB|FBgn0037442 [details] [associations]
symbol:CG10277 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 EMBL:AE014297 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990
GeneTree:ENSGT00700000104226 KO:K15692 FlyBase:FBgn0037442
EMBL:BT133094 RefSeq:NP_001097695.1 RefSeq:NP_649653.1
RefSeq:NP_731079.1 RefSeq:NP_731080.1 UniGene:Dm.1079 SMR:Q9VI20
MINT:MINT-1017740 EnsemblMetazoa:FBtr0081720
EnsemblMetazoa:FBtr0081721 EnsemblMetazoa:FBtr0081722
EnsemblMetazoa:FBtr0113198 GeneID:40791 KEGG:dme:Dmel_CG10277
UCSC:CG10277-RA InParanoid:Q9VI20 OMA:CIREQRR GenomeRNAi:40791
NextBio:820604 Uniprot:Q9VI20
Length = 536
Score = 156 (60.0 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 75 RIRTSSVMRVLMPVFRFSSKDCNE--DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMW 132
R R M +PV R++ + N DTC +CL DF E +++RVLP C H +H CID W
Sbjct: 207 RHRLPKSMLKKLPVLRYTKNNANNKYDTCVICLEDFIEDDKLRVLP-CSHPYHTHCIDPW 265
Query: 133 LSSHSN-CPLCR 143
L+ + CP+C+
Sbjct: 266 LTENRRVCPICK 277
>UNIPROTKB|A5PKC6 [details] [associations]
symbol:RNF12 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5540 HOVERGEN:HBG009886 GeneTree:ENSGT00700000104290
CTD:51132 HOGENOM:HOG000273881 EMBL:DAAA02073777 EMBL:BC142439
IPI:IPI00824500 RefSeq:NP_001093198.1 UniGene:Bt.85872
Ensembl:ENSBTAT00000055387 GeneID:785287 KEGG:bta:785287
InParanoid:A5PKC6 OMA:NINDITC OrthoDB:EOG444KM0 NextBio:20927207
Uniprot:A5PKC6
Length = 634
Score = 157 (60.3 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 86 MPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P+ F KD + C +C+ ++ G +RVLP C H +H CID WL HSNCP+CR
Sbjct: 566 LPLRFFEEKDAAK-ICTICITEYTAGNMLRVLP-CSHEYHYQCIDQWLEEHSNCPICR 621
>ZFIN|ZDB-GENE-101206-1 [details] [associations]
symbol:wu:fb39e10 "wu:fb39e10" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-101206-1 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 EMBL:CR385081 IPI:IPI00898579
RefSeq:XP_001923015.2 UniGene:Dr.76926 Ensembl:ENSDART00000128102
GeneID:561841 KEGG:dre:561841 NextBio:20884119 Bgee:E7F6I4
Uniprot:E7F6I4
Length = 474
Score = 155 (59.6 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 86 MPVFRFS-SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRA 144
+P+ + + + C +C ++K GE++R+LP CLH +HV CID WL ++ CP+CRA
Sbjct: 407 LPIKTYDPTHSAGKTDCQICFSEYKAGERLRMLP-CLHDYHVKCIDRWLKENATCPICRA 465
Query: 145 NAN 147
+ +
Sbjct: 466 DVS 468
>UNIPROTKB|J9NYE2 [details] [associations]
symbol:RNF150 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104211
OMA:KFAAPTH EMBL:AAEX03011705 EMBL:AAEX03011706 EMBL:AAEX03011707
Ensembl:ENSCAFT00000044982 Uniprot:J9NYE2
Length = 382
Score = 153 (58.9 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 99 DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN---ANAAPP 151
D CAVC+ +K + VR+LP C HLFH C+D WL H CP+C+ N A PP
Sbjct: 220 DNCAVCIEGYKPNDVVRILP-CRHLFHKSCVDPWLLDHRTCPMCKMNILKALGIPP 274
>MGI|MGI:1934919 [details] [associations]
symbol:Rnf111 "ring finger 111" species:10090 "Mus musculus"
[GO:0000209 "protein polyubiquitination" evidence=IGI;IMP;IDA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007389
"pattern specification process" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=IMP;IDA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process"
evidence=IMP;IDA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IMP;IDA] [GO:0032184 "SUMO polymer
binding" evidence=ISO] [GO:0043234 "protein complex" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0046332 "SMAD binding" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
MGI:MGI:1934919 Prosite:PS00518 GO:GO:0005737 GO:GO:0045893
GO:GO:0043234 GO:GO:0005654 GO:GO:0005730 GO:GO:0046872
GO:GO:0008270 GO:GO:0030511 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0007389 GO:GO:0000209
GO:GO:0032184 GO:GO:0030579 CTD:54778 eggNOG:NOG291583
HOVERGEN:HBG093884 KO:K10635 OMA:CDDSQKQ EMBL:AF330197
EMBL:AK048110 EMBL:AK036351 EMBL:AK137148 EMBL:BC054842
EMBL:BC069835 IPI:IPI00117820 IPI:IPI00830944 RefSeq:NP_291082.1
UniGene:Mm.29783 ProteinModelPortal:Q99ML9 SMR:Q99ML9 IntAct:Q99ML9
MINT:MINT-1899537 STRING:Q99ML9 PhosphoSite:Q99ML9 PRIDE:Q99ML9
Ensembl:ENSMUST00000034739 Ensembl:ENSMUST00000113595 GeneID:93836
KEGG:mmu:93836 UCSC:uc009qoa.1 UCSC:uc009qoe.1
GeneTree:ENSGT00670000097625 HOGENOM:HOG000154152 InParanoid:Q99ML9
OrthoDB:EOG4MSCXR NextBio:351685 Bgee:Q99ML9 CleanEx:MM_RNF111
Genevestigator:Q99ML9 Uniprot:Q99ML9
Length = 989
Score = 159 (61.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 93 SKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP 151
+++ E+ C +CL +EGE VR LP C+HLFH C+D WL ++ CP+CR + A P
Sbjct: 929 TEEDTEEKCTICLSILEEGEDVRRLP-CMHLFHQVCVDQWLITNKKCPICRVDIEAQLP 986
>WB|WBGene00007226 [details] [associations]
symbol:C01G6.4 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
eggNOG:NOG265447 EMBL:Z35595 HOGENOM:HOG000007448 KO:K11980
GeneTree:ENSGT00700000104290 PIR:T18836 RefSeq:NP_495976.1
ProteinModelPortal:Q17573 SMR:Q17573 DIP:DIP-24608N
MINT:MINT-1046840 PaxDb:Q17573 EnsemblMetazoa:C01G6.4.1
EnsemblMetazoa:C01G6.4.2 GeneID:182077 KEGG:cel:CELE_C01G6.4
UCSC:C01G6.4 CTD:182077 WormBase:C01G6.4 InParanoid:Q17573
OMA:ECAICMI NextBio:916292 Uniprot:Q17573
Length = 170
Score = 146 (56.5 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 32/85 (37%), Positives = 47/85 (55%)
Query: 58 RQDTERNYDHRQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVL 117
RQ E+ + E ++RIR + ++ VFR D + CA+C+ DF+ GE++R L
Sbjct: 57 RQAQEQGKE-LDEAKKNRIR-GLLEQIPADVFR---GDMTSNECAICMIDFEPGERIRFL 111
Query: 118 PECLHLFHVPCIDMWLSSHSNCPLC 142
P C+H FH C+D WL CP C
Sbjct: 112 P-CMHSFHQECVDEWLMKSFTCPSC 135
>TAIR|locus:2139717 [details] [associations]
symbol:AT4G11680 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005774 "vacuolar membrane" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005774
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL161532 HSSP:Q9LRB7 EMBL:AL049500 HOGENOM:HOG000240958
ProtClustDB:CLSN2682050 EMBL:DQ059121 EMBL:AY057713 EMBL:BT010750
IPI:IPI00525329 PIR:T04215 RefSeq:NP_567379.1 UniGene:At.20734
ProteinModelPortal:Q93Z92 SMR:Q93Z92 EnsemblPlants:AT4G11680.1
GeneID:826773 KEGG:ath:AT4G11680 GeneFarm:3078 TAIR:At4g11680
eggNOG:NOG288486 InParanoid:Q93Z92 OMA:HLEERQT PhylomeDB:Q93Z92
Genevestigator:Q93Z92 Uniprot:Q93Z92
Length = 390
Score = 137 (53.3 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 98 EDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
ED C +CL ++++G ++R LP C H FH CID WL +S CPLC+ N
Sbjct: 334 EDAECCICLCEYEDGVELRELP-CNHHFHCTCIDKWLHINSRCPLCKFN 381
Score = 36 (17.7 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 6 AGHQPGLQFSPLLIGLLGVIAGFMMVATYHCISL 39
AG Q SP L L + GF + C++L
Sbjct: 227 AGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVAL 260
>UNIPROTKB|Q9H0F5 [details] [associations]
symbol:RNF38 "RING finger protein 38" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 EMBL:CH471071
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 EMBL:AL161792
EMBL:AF394047 EMBL:AL136817 EMBL:AL354935 EMBL:BC033786
IPI:IPI00167875 IPI:IPI00375419 IPI:IPI00478430 RefSeq:NP_073618.3
RefSeq:NP_919309.1 RefSeq:NP_919310.1 RefSeq:NP_919311.1
RefSeq:NP_919313.1 UniGene:Hs.333503 PDB:1X4J PDBsum:1X4J
ProteinModelPortal:Q9H0F5 SMR:Q9H0F5 IntAct:Q9H0F5
PhosphoSite:Q9H0F5 DMDM:56749664 PRIDE:Q9H0F5 DNASU:152006
Ensembl:ENST00000259605 Ensembl:ENST00000350199
Ensembl:ENST00000353739 Ensembl:ENST00000357058
Ensembl:ENST00000377885 GeneID:152006 KEGG:hsa:152006
UCSC:uc003zzh.3 UCSC:uc003zzi.3 CTD:152006 GeneCards:GC09M036336
HGNC:HGNC:18052 HPA:HPA015853 MIM:612488 neXtProt:NX_Q9H0F5
PharmGKB:PA34438 HOGENOM:HOG000231638 HOVERGEN:HBG059283
InParanoid:Q9H0F5 OMA:FLLHPPH OrthoDB:EOG4TB4B7 PhylomeDB:Q9H0F5
ChiTaRS:RNF38 EvolutionaryTrace:Q9H0F5 GenomeRNAi:152006
NextBio:86839 ArrayExpress:Q9H0F5 Bgee:Q9H0F5 CleanEx:HS_RNF38
Genevestigator:Q9H0F5 GermOnline:ENSG00000137075 Uniprot:Q9H0F5
Length = 515
Score = 155 (59.6 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 86 MPVFRFSSKDC-NEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ + +E T C VC+ DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 446 LPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 504
Query: 144 ANAN 147
A+A+
Sbjct: 505 ADAS 508
>UNIPROTKB|F1ST85 [details] [associations]
symbol:RNF38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FLLHPPH EMBL:FP015977
EMBL:FP015987 Ensembl:ENSSSCT00000005882 Uniprot:F1ST85
Length = 518
Score = 155 (59.6 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 86 MPVFRFSSKDC-NEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P +RF+ + +E T C VC+ DF+ + +RVLP C H FH C+D WL ++ CP+CR
Sbjct: 449 LPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICR 507
Query: 144 ANAN 147
A+A+
Sbjct: 508 ADAS 511
>RGD|1306011 [details] [associations]
symbol:Rnf126 "ring finger protein 126" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1306011 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00530000062967 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OMA:GQNTATD OrthoDB:EOG4VQ9PZ EMBL:BC099810 IPI:IPI00369174
RefSeq:NP_001028874.1 UniGene:Rn.143411 SMR:Q499Q1
Ensembl:ENSRNOT00000012317 GeneID:314613 KEGG:rno:314613
UCSC:RGD:1306011 InParanoid:Q499Q1 NextBio:667904
Genevestigator:Q499Q1 Uniprot:Q499Q1
Length = 328
Score = 136 (52.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 28/58 (48%), Positives = 33/58 (56%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANAN----AAPPPHL 154
C VC D+ GE+VR LP C HLFH CI WL H +CP+CR + A PP L
Sbjct: 246 CPVCKEDYALGERVRQLP-CNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTATNPPGL 302
Score = 34 (17.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 54 EPNTRQDTERNYDHRQ--EWPRDRI 76
+P +R++ E HR PR R+
Sbjct: 122 DPESRREREHQSRHRYGARQPRARL 146
>RGD|1563631 [details] [associations]
symbol:Znrf4 "zinc and ring finger 4" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1563631 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:CH474092 HOVERGEN:HBG063762 CTD:148066
KO:K15715 EMBL:BC098025 IPI:IPI00371345 RefSeq:NP_001020049.1
UniGene:Rn.104114 GeneID:301127 KEGG:rno:301127 NextBio:648210
Genevestigator:Q4V7C2 Uniprot:Q4V7C2
Length = 327
Score = 151 (58.2 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 99 DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLS--SHSNCPLCRANANAAPPPHLVL 156
D CA+CL D++EGE++++LP C H +H CID W S + +CPLC+ + + H
Sbjct: 207 DLCAICLDDYEEGERLKILP-CAHAYHCRCIDPWFSRAARRSCPLCKQSVAST---HDGS 262
Query: 157 TLPDSGG--APQPEFHRAP 173
T GG AP P HR P
Sbjct: 263 TDGSIGGDEAPLPG-HRPP 280
>MGI|MGI:1917544 [details] [associations]
symbol:Rnf126 "ring finger protein 126" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1917544
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00530000062967 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OrthoDB:EOG4VQ9PZ EMBL:BC016543 IPI:IPI00130263 RefSeq:NP_653111.1
UniGene:Mm.466670 PDB:2ECT PDBsum:2ECT ProteinModelPortal:Q91YL2
SMR:Q91YL2 PhosphoSite:Q91YL2 PaxDb:Q91YL2 PRIDE:Q91YL2
Ensembl:ENSMUST00000047203 GeneID:70294 KEGG:mmu:70294
InParanoid:Q91YL2 OMA:RSADNGS EvolutionaryTrace:Q91YL2
NextBio:331326 Bgee:Q91YL2 CleanEx:MM_RNF126 Genevestigator:Q91YL2
GermOnline:ENSMUSG00000035890 Uniprot:Q91YL2
Length = 313
Score = 135 (52.6 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 28/58 (48%), Positives = 32/58 (55%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANAN----AAPPPHL 154
C VC D+ GE VR LP C HLFH CI WL H +CP+CR + A PP L
Sbjct: 231 CPVCKEDYALGESVRQLP-CNHLFHDSCIVPWLEQHDSCPVCRKSLTGQNTATNPPGL 287
Score = 34 (17.0 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 8/25 (32%), Positives = 13/25 (52%)
Query: 54 EPNTRQDTERNYDHRQ--EWPRDRI 76
+P +R++ E HR PR R+
Sbjct: 107 DPESRREREHQSRHRYGARQPRARL 131
>UNIPROTKB|E1C2N7 [details] [associations]
symbol:RNF150 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104211
EMBL:AADN02016249 EMBL:AADN02016250 EMBL:AADN02016251
EMBL:AADN02016252 IPI:IPI00599373 Ensembl:ENSGALT00000016039
ArrayExpress:E1C2N7 Uniprot:E1C2N7
Length = 427
Score = 153 (58.9 bits), Expect = 3.0e-10, P = 3.0e-10
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 99 DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN---ANAAPP 151
D CAVC+ +K + VR+LP C HLFH C+D WL H CP+C+ N A PP
Sbjct: 265 DNCAVCIEGYKPNDVVRILP-CRHLFHKSCVDPWLLDHRTCPMCKMNILKALGIPP 319
>MGI|MGI:2443860 [details] [associations]
symbol:Rnf150 "ring finger protein 150" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 MGI:MGI:2443860 Pfam:PF02225
Prosite:PS00518 GO:GO:0016021 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG302028
GeneTree:ENSGT00700000104211 HOGENOM:HOG000231432
HOVERGEN:HBG057659 CTD:57484 OMA:KFAAPTH EMBL:AK220374
EMBL:AK041412 EMBL:AC124757 EMBL:AC132372 EMBL:AC166939
IPI:IPI00663640 IPI:IPI00830332 IPI:IPI00830491 RefSeq:NP_796352.2
UniGene:Mm.66737 ProteinModelPortal:Q5DTZ6 SMR:Q5DTZ6 PRIDE:Q5DTZ6
DNASU:330812 Ensembl:ENSMUST00000078525 GeneID:330812
KEGG:mmu:330812 UCSC:uc009mjq.1 UCSC:uc009mjt.2 InParanoid:Q5DTZ6
NextBio:399558 Bgee:Q5DTZ6 CleanEx:MM_RNF150 Genevestigator:Q5DTZ6
Uniprot:Q5DTZ6
Length = 437
Score = 153 (58.9 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 99 DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN---ANAAPP 151
D CAVC+ +K + VR+LP C HLFH C+D WL H CP+C+ N A PP
Sbjct: 275 DNCAVCIEGYKPNDVVRILP-CRHLFHKSCVDPWLLDHRTCPMCKMNILKALGIPP 329
>UNIPROTKB|Q9ULK6 [details] [associations]
symbol:RNF150 "RING finger protein 150" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 Prosite:PS00518 GO:GO:0016021 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
eggNOG:COG5540 HOGENOM:HOG000231432 HOVERGEN:HBG057659
EMBL:AB033040 EMBL:AK130520 EMBL:AC093905 EMBL:AC096733
EMBL:AC097475 EMBL:BC101992 IPI:IPI00297277 IPI:IPI00742907
IPI:IPI00829678 IPI:IPI00830119 RefSeq:NP_065775.1
UniGene:Hs.659104 ProteinModelPortal:Q9ULK6 SMR:Q9ULK6
IntAct:Q9ULK6 STRING:Q9ULK6 DMDM:134035025 PRIDE:Q9ULK6
Ensembl:ENST00000306799 Ensembl:ENST00000379512
Ensembl:ENST00000420921 Ensembl:ENST00000507500
Ensembl:ENST00000515673 GeneID:57484 KEGG:hsa:57484 UCSC:uc003iio.1
UCSC:uc003iip.1 UCSC:uc010iok.1 CTD:57484 GeneCards:GC04M141786
H-InvDB:HIX0024725 HGNC:HGNC:23138 HPA:HPA037987 neXtProt:NX_Q9ULK6
PharmGKB:PA134918555 InParanoid:Q9ULK6 OMA:KFAAPTH
OrthoDB:EOG412M5G GenomeRNAi:57484 NextBio:63760
ArrayExpress:Q9ULK6 Bgee:Q9ULK6 CleanEx:HS_RNF150
Genevestigator:Q9ULK6 Uniprot:Q9ULK6
Length = 438
Score = 153 (58.9 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 27/56 (48%), Positives = 34/56 (60%)
Query: 99 DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN---ANAAPP 151
D CAVC+ +K + VR+LP C HLFH C+D WL H CP+C+ N A PP
Sbjct: 276 DNCAVCIEGYKPNDVVRILP-CRHLFHKSCVDPWLLDHRTCPMCKMNILKALGIPP 330
>UNIPROTKB|K7GLV3 [details] [associations]
symbol:LOC100519085 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104211
EMBL:CU407202 EMBL:CU424450 Ensembl:ENSSSCT00000032920
Uniprot:K7GLV3
Length = 138
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
D + + CAVC+ +FK + +R+LP C H+FH CID WL H CP+C+
Sbjct: 3 DVDAENCAVCIENFKVKDVIRILP-CKHIFHRICIDPWLLDHRTCPMCK 50
>TAIR|locus:2169145 [details] [associations]
symbol:AT5G37270 "AT5G37270" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990 EMBL:AB017069
HOGENOM:HOG000131725 EMBL:DQ086856 IPI:IPI00526930
RefSeq:NP_198543.1 UniGene:At.65588 ProteinModelPortal:Q9FHT8
SMR:Q9FHT8 EnsemblPlants:AT5G37270.1 GeneID:833701
KEGG:ath:AT5G37270 TAIR:At5g37270 eggNOG:NOG255813
InParanoid:Q9FHT8 PhylomeDB:Q9FHT8 ProtClustDB:CLSN2686895
Genevestigator:Q9FHT8 Uniprot:Q9FHT8
Length = 208
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 95 DCNEDTCAVCLGDFKEG--EQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
D E TC++CL DF E + + +LP+C HLFH CI WL +CPLCR
Sbjct: 147 DEEETTCSICLEDFSESHDDNIILLPDCFHLFHQSCIFEWLKRQRSCPLCR 197
>TAIR|locus:2169105 [details] [associations]
symbol:AT5G37230 "AT5G37230" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AB017069
HOGENOM:HOG000131725 ProtClustDB:CLSN2686895 IPI:IPI00544463
RefSeq:NP_198539.1 UniGene:At.55183 ProteinModelPortal:Q9FHU1
SMR:Q9FHU1 EnsemblPlants:AT5G37230.1 GeneID:833697
KEGG:ath:AT5G37230 TAIR:At5g37230 InParanoid:Q9FHU1 OMA:ICMEDFS
PhylomeDB:Q9FHU1 Genevestigator:Q9FHU1 Uniprot:Q9FHU1
Length = 208
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 95 DCNEDTCAVCLGDFKEG--EQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
D E TC++C+ DF E + + +LP+C HLFH CI WL +CPLCR
Sbjct: 147 DEEETTCSICMEDFSESHDDNIILLPDCFHLFHQSCIFKWLKRQRSCPLCR 197
>TAIR|locus:2169125 [details] [associations]
symbol:AT5G37250 "AT5G37250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
IPI:IPI00546985 RefSeq:NP_198541.1 UniGene:At.55185
ProteinModelPortal:F4K5X5 SMR:F4K5X5 EnsemblPlants:AT5G37250.1
GeneID:833699 KEGG:ath:AT5G37250 Uniprot:F4K5X5
Length = 192
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 95 DCNEDTCAVCLGDFKEG--EQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
D E TC++CL DF E + + +LP+C HLFH CI WL +CPLCR
Sbjct: 131 DEEETTCSICLEDFSESHDDNIILLPDCFHLFHQNCIFEWLKRQRSCPLCR 181
>TAIR|locus:2824666 [details] [associations]
symbol:AT1G35625 "AT1G35625" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008233 "peptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:CP002684 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 UniGene:At.15140 UniGene:At.39523 KO:K15692
IPI:IPI00523259 RefSeq:NP_174799.4 ProteinModelPortal:F4HZZ4
SMR:F4HZZ4 EnsemblPlants:AT1G35625.1 GeneID:840462
KEGG:ath:AT1G35625 OMA:DECCINS PhylomeDB:F4HZZ4 Uniprot:F4HZZ4
Length = 201
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 44/143 (30%), Positives = 62/143 (43%)
Query: 17 LLIGLLGVIAGFMMVATYHCISLGXXXXXXXXXXXXXEPNTRQDTERNYDH----RQEWP 72
LLI G+ + +M T+ +SL RQ R+ H P
Sbjct: 35 LLIPGFGISSWSIMAITF--VSLLVISAVLASYFSVRRHRIRQHV-RDLHHGGQGHSRMP 91
Query: 73 RDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMW 132
+D ++ S V V S TCA+C+ D++ GE +R+LP C H +H CID W
Sbjct: 92 KDLLQ-SMPTEVYTGVLEEGSTSV---TCAICIDDYRVGEILRILP-CKHKYHAVCIDSW 146
Query: 133 LSS-HSNCPLCRAN---ANAAPP 151
L S CP+C+ N N PP
Sbjct: 147 LGRCRSFCPVCKQNPRTGNDVPP 169
>TAIR|locus:2082757 [details] [associations]
symbol:BRH1 "brassinosteroid-responsive RING-H2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0009741 "response to brassinosteroid stimulus" evidence=IEP]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0070838 "divalent
metal ion transport" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132962 GO:GO:0046872 GO:GO:0008270
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GO:GO:0009741 HOGENOM:HOG000239353 EMBL:AF134155 EMBL:AY065300
EMBL:AY117307 EMBL:AY086562 IPI:IPI00518428 PIR:T47938
RefSeq:NP_191705.1 UniGene:At.942 ProteinModelPortal:Q9XF92
SMR:Q9XF92 STRING:Q9XF92 EnsemblPlants:AT3G61460.1 GeneID:825319
KEGG:ath:AT3G61460 TAIR:At3g61460 eggNOG:NOG310014
InParanoid:Q9XF92 OMA:PRVLLQV PhylomeDB:Q9XF92
ProtClustDB:CLSN2915750 ArrayExpress:Q9XF92 Genevestigator:Q9XF92
Uniprot:Q9XF92
Length = 170
Score = 144 (55.7 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 33/79 (41%), Positives = 45/79 (56%)
Query: 72 PRDRIRTSSVM-RVLMPVFRFSS-KDCNED---TCAVCLGDFKEGEQ-VRVLPECLHLFH 125
P R S+++ R ++PV +F + ED CAVCL +F EGEQ +R L C H+FH
Sbjct: 60 PETRSPFSALLIREILPVIKFEELTNSGEDLPENCAVCLYEF-EGEQEIRWLRNCRHIFH 118
Query: 126 VPCIDMWLS-SHSNCPLCR 143
C+D W+ CPLCR
Sbjct: 119 RSCLDRWMDHDQKTCPLCR 137
>FB|FBgn0037705 [details] [associations]
symbol:mura "murashka" species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008355
"olfactory learning" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048149 "behavioral response to ethanol" evidence=IMP]
[GO:2001020 "regulation of response to DNA damage stimulus"
evidence=IGI] [GO:0007616 "long-term memory" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:AE014297 GO:GO:0008355 GO:GO:0046872 GO:GO:0008270
GO:GO:0007616 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00670000097625 UniGene:Dm.11144 GeneID:41145
KEGG:dme:Dmel_CG9381 CTD:41145 FlyBase:FBgn0037705 GenomeRNAi:41145
NextBio:822398 EMBL:BT125858 RefSeq:NP_731367.2 SMR:Q9VHC2
STRING:Q9VHC2 EnsemblMetazoa:FBtr0082118 UCSC:CG9381-RC
InParanoid:Q9VHC2 OMA:ARLAPCH Uniprot:Q9VHC2
Length = 1173
Score = 157 (60.3 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 86 MPVFRFSSKDCNED--TCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P ++F+ + N D +C VC+ DF+ + +RVLP C H FH C+D WL S+ CP+CR
Sbjct: 1060 LPSYKFNPEVHNGDQSSCVVCMCDFELRQLLRVLP-CSHEFHAKCVDKWLRSNRTCPICR 1118
Query: 144 ANAN 147
NA+
Sbjct: 1119 GNAS 1122
>ZFIN|ZDB-GENE-091118-64 [details] [associations]
symbol:rnf165a "ring finger protein 165a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-091118-64 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00670000097625
EMBL:CU466271 IPI:IPI01007348 Ensembl:ENSDART00000097796
Bgee:E9QHW9 Uniprot:E9QHW9
Length = 311
Score = 148 (57.2 bits), Expect = 5.0e-10, P = 5.0e-10
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 98 EDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPPP 152
++ C +CL ++GE VR LP C+HLFH C+D WL++ CP+CR + P
Sbjct: 256 DEKCTICLSMLEDGEDVRRLP-CMHLFHQACVDQWLATSRKCPICRVDIQTQLSP 309
>UNIPROTKB|F1PRN3 [details] [associations]
symbol:RNF149 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104211 EMBL:AAEX03007433
Ensembl:ENSCAFT00000003449 OMA:DATFKED Uniprot:F1PRN3
Length = 238
Score = 144 (55.7 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
D + + CAVC+ +FK + +R+LP C H+FH CID WL H CP+C+
Sbjct: 102 DVDAENCAVCIENFKVKDIIRILP-CKHIFHRICIDPWLLDHRTCPMCK 149
>TAIR|locus:2195077 [details] [associations]
symbol:AT1G12760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
EMBL:AC025417 eggNOG:NOG277561 HOGENOM:HOG000240958
ProtClustDB:CLSN2682050 EMBL:DQ059089 EMBL:AY136370 EMBL:BT000279
IPI:IPI00516637 RefSeq:NP_172736.2 UniGene:At.43884
ProteinModelPortal:Q9LN71 SMR:Q9LN71 PaxDb:Q9LN71 PRIDE:Q9LN71
EnsemblPlants:AT1G12760.1 GeneID:837832 KEGG:ath:AT1G12760
TAIR:At1g12760 InParanoid:Q9LN71 OMA:ESPRIYW PhylomeDB:Q9LN71
Genevestigator:Q9LN71 Uniprot:Q9LN71
Length = 408
Score = 131 (51.2 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 98 EDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
ED C +CL +++G ++R LP C H FH C+D WL ++ CPLC+ N
Sbjct: 349 EDAECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCKYN 396
Score = 40 (19.1 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 6 AGHQPGLQFSPLLIGLLGVIAGFMMVATYHCISL 39
AG Q Q SP + L V GF + C++L
Sbjct: 237 AGGQELAQESPRIYWLSIVFLGFDVFFVVFCVAL 270
>TAIR|locus:2177931 [details] [associations]
symbol:AT5G41400 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0009963 "positive
regulation of flavonoid biosynthetic process" evidence=RCA]
[GO:0010363 "regulation of plant-type hypersensitive response"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AB006707
ProtClustDB:CLSN2682608 EMBL:BT002979 EMBL:BT004422 IPI:IPI00530479
RefSeq:NP_198956.1 UniGene:At.30234 ProteinModelPortal:Q9FN60
SMR:Q9FN60 EnsemblPlants:AT5G41400.1 GeneID:834142
KEGG:ath:AT5G41400 TAIR:At5g41400 InParanoid:Q9FN60 OMA:CLHEFEN
PhylomeDB:Q9FN60 ArrayExpress:Q9FN60 Genevestigator:Q9FN60
Uniprot:Q9FN60
Length = 176
Score = 143 (55.4 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 85 LMPVFRFSSKD-----CNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSN- 138
++PV RFS D CAVCL +F+ +++R L C H+FH C+D W+ ++
Sbjct: 84 ILPVIRFSELTRPGFGSGSDCCAVCLHEFENDDEIRRLTNCQHIFHRSCLDRWMMGYNQM 143
Query: 139 -CPLCR 143
CPLCR
Sbjct: 144 TCPLCR 149
>ZFIN|ZDB-GENE-091204-252 [details] [associations]
symbol:si:dkeyp-86f7.4 "si:dkeyp-86f7.4"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 ZFIN:ZDB-GENE-091204-252
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104211 EMBL:BX957231 EMBL:CR293501
IPI:IPI00491152 Ensembl:ENSDART00000042727 Uniprot:E9QIM4
Length = 319
Score = 148 (57.2 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 68 RQEWPRDRIRTSSVMRVLMPVFRFSSKDCN-EDT-CAVCLGDFKEGEQVRVLPECLHLFH 125
RQ+ R ++ ++ + R + + + +DT C VC ++ GEQV VLP C HL+H
Sbjct: 227 RQQMEIKRETEKAIGKLEVRTLRTNDPEVDSDDTGCVVCTDSYQRGEQVTVLP-CRHLYH 285
Query: 126 VPCIDMWLSSHSNCPLCRAN 145
CI+ WL H CP+C+ N
Sbjct: 286 KKCIEPWLLEHPTCPMCKYN 305
>UNIPROTKB|E1BNT4 [details] [associations]
symbol:RNF43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072089 "stem cell proliferation" evidence=IEA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0038018 "Wnt receptor
catabolic process" evidence=IEA] [GO:0005887 "integral to plasma
membrane" evidence=IEA] [GO:0005109 "frizzled binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005887 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0030178
GeneTree:ENSGT00530000063291 CTD:54894 KO:K15694 OMA:YLLGPSR
EMBL:DAAA02048319 IPI:IPI00712958 RefSeq:NP_001178123.1
UniGene:Bt.24153 ProteinModelPortal:E1BNT4 PRIDE:E1BNT4
Ensembl:ENSBTAT00000026797 GeneID:784035 KEGG:bta:784035
NextBio:20926451 Uniprot:E1BNT4
Length = 783
Score = 154 (59.3 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 92 SSKDCNE-DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
S C+ CA+CL +F EG+++RV+ CLH FH C+D WL H CPLC N
Sbjct: 262 SGSSCSSAPVCAICLEEFSEGQELRVI-SCLHEFHRTCVDPWLHQHRTCPLCMFN 315
>UNIPROTKB|Q8N7C7 [details] [associations]
symbol:RNF148 "RING finger protein 148" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137
Pfam:PF02225 Prosite:PS00518 GO:GO:0016021 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9H0F5
HOGENOM:HOG000231432 HOVERGEN:HBG057659 EMBL:AL133414 CTD:378925
EMBL:AK098654 EMBL:BC029264 IPI:IPI00549513 RefSeq:NP_932351.1
UniGene:Hs.675191 ProteinModelPortal:Q8N7C7 SMR:Q8N7C7
PhosphoSite:Q8N7C7 DMDM:269849640 PRIDE:Q8N7C7
Ensembl:ENST00000434824 GeneID:378925 KEGG:hsa:378925
UCSC:uc003vkk.1 GeneCards:GC07M122341 HGNC:HGNC:22411 HPA:HPA045587
neXtProt:NX_Q8N7C7 PharmGKB:PA134918676 eggNOG:NOG254647
OMA:IDPWLLA OrthoDB:EOG4J9N0D GenomeRNAi:378925 NextBio:100862
ArrayExpress:Q8N7C7 Bgee:Q8N7C7 CleanEx:HS_RNF148
Genevestigator:Q8N7C7 Uniprot:Q8N7C7
Length = 305
Score = 147 (56.8 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
D NED C VC +K + VR+L C H FH CID WL +H CP+C+ +
Sbjct: 252 DLNEDNCVVCFDTYKPQDVVRILT-CKHFFHKACIDPWLLAHRTCPMCKCD 301
>ZFIN|ZDB-GENE-061215-82 [details] [associations]
symbol:rnf115 "ring finger protein 115" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-061215-82 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 CTD:27246 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 OMA:STHFAEF
OrthoDB:EOG4VX262 EMBL:BX322530 EMBL:BC128879 IPI:IPI00803572
RefSeq:NP_001073542.1 UniGene:Dr.78061 SMR:A1A601
Ensembl:ENSDART00000090329 GeneID:790928 KEGG:dre:790928
InParanoid:A1A601 NextBio:20930412 Uniprot:A1A601
Length = 310
Score = 147 (56.8 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 31/76 (40%), Positives = 41/76 (53%)
Query: 72 PRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDM 131
P ++ + SS+ V++ DCN + C VC D+ GE VR LP C H FH CI
Sbjct: 213 PAEKEKISSLPTVIITQ---EHTDCNME-CPVCKEDYTVGEPVRQLP-CNHFFHSDCIVP 267
Query: 132 WLSSHSNCPLCRANAN 147
WL H CP+CR + N
Sbjct: 268 WLELHDTCPVCRKSLN 283
>UNIPROTKB|I3LA46 [details] [associations]
symbol:I3LA46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000063291 Ensembl:ENSSSCT00000026758 OMA:ITILMIF
Uniprot:I3LA46
Length = 218
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
CA+CL + +GE++RV+P C H FH C+D WL H CP CR N
Sbjct: 102 CAICLEKYIDGEELRVIP-CTHRFHRKCVDPWLLQHHTCPHCRHN 145
>TAIR|locus:505006623 [details] [associations]
symbol:AT5G20885 "AT5G20885" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008270
"zinc ion binding" evidence=IEA;ISS] [GO:0006612 "protein targeting
to membrane" evidence=RCA] [GO:0009963 "positive regulation of
flavonoid biosynthetic process" evidence=RCA] [GO:0010363
"regulation of plant-type hypersensitive response" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AY057610
EMBL:BT000813 EMBL:AK118243 IPI:IPI00521955 RefSeq:NP_568404.1
UniGene:At.26270 ProteinModelPortal:Q93ZD8 SMR:Q93ZD8
EnsemblPlants:AT5G20885.1 GeneID:832212 KEGG:ath:AT5G20885
TAIR:At5g20885 eggNOG:NOG283400 HOGENOM:HOG000029121
InParanoid:Q93ZD8 OMA:WILAWIL PhylomeDB:Q93ZD8
ProtClustDB:CLSN2684279 Genevestigator:Q93ZD8 Uniprot:Q93ZD8
Length = 176
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 30/66 (45%), Positives = 36/66 (54%)
Query: 99 DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLS---------------SHSNCPLCR 143
DTCAVCLGD ++G++VR L C H+FH CID WL +H CPLCR
Sbjct: 80 DTCAVCLGDLEDGDEVRELRNCSHMFHRECIDRWLDYECCGGDENNEGEEDNHRTCPLCR 139
Query: 144 ANANAA 149
AA
Sbjct: 140 TPLLAA 145
>TAIR|locus:2011491 [details] [associations]
symbol:AT1G53010 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC019018
EMBL:AC022520 IPI:IPI00532955 RefSeq:NP_175709.1 UniGene:At.66013
ProteinModelPortal:Q9C919 SMR:Q9C919 EnsemblPlants:AT1G53010.1
GeneID:841734 KEGG:ath:AT1G53010 TAIR:At1g53010 eggNOG:NOG331877
HOGENOM:HOG000152223 InParanoid:Q9C919 OMA:YHALCID PhylomeDB:Q9C919
ProtClustDB:CLSN2679774 Genevestigator:Q9C919 Uniprot:Q9C919
Length = 178
Score = 142 (55.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 94 KDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
K CA+CL + E+ RV P C H++H CID WL +H CP CR
Sbjct: 123 KSLESRECAICLSGYVVNEECRVFPVCRHIYHALCIDAWLKNHLTCPTCR 172
>WB|WBGene00007666 [details] [associations]
symbol:C18B12.4 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
GeneTree:ENSGT00700000104226 eggNOG:NOG260066 EMBL:AL031620
PIR:T19377 RefSeq:NP_510498.1 ProteinModelPortal:Q9XX98 SMR:Q9XX98
PaxDb:Q9XX98 EnsemblMetazoa:C18B12.4 GeneID:181600
KEGG:cel:CELE_C18B12.4 UCSC:C18B12.4 CTD:181600 WormBase:C18B12.4
HOGENOM:HOG000018306 InParanoid:Q9XX98 OMA:AICLESF NextBio:914610
Uniprot:Q9XX98
Length = 456
Score = 150 (57.9 bits), Expect = 7.1e-10, P = 7.1e-10
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 68 RQEWPRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVP 127
R++ + R+ ++ ++ PV ++ D + DTCA+CL F GE++R LP C H+FH
Sbjct: 217 RRKLNKRRLSKRNLKKI--PVKKYRLGD-DPDTCAICLESFASGEKLRHLP-CRHVFHCN 272
Query: 128 CIDMWLS-SHSNCPLCR 143
CID+WL+ + CPLC+
Sbjct: 273 CIDVWLTQTRKICPLCK 289
>UNIPROTKB|J3KSE3 [details] [associations]
symbol:RNF43 "E3 ubiquitin-protein ligase RNF43"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC023992 EMBL:AC004687 HGNC:HGNC:18505
ChiTaRS:RNF43 ProteinModelPortal:J3KSE3 Ensembl:ENST00000581868
Uniprot:J3KSE3
Length = 742
Score = 153 (58.9 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 92 SSKDCNE-DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
S C+ CA+CL +F EG+++RV+ CLH FH C+D WL H CPLC N
Sbjct: 135 SGSSCSSAPVCAICLEEFSEGQELRVI-SCLHEFHRNCVDPWLHQHRTCPLCMFN 188
>TAIR|locus:2100021 [details] [associations]
symbol:SDIR1 "SALT- AND DROUGHT-INDUCED RING FINGER1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0009414 "response to water deprivation" evidence=IEP]
[GO:0009651 "response to salt stress" evidence=IEP] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009789
"positive regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0006301 "postreplication
repair" evidence=RCA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0005783
GO:GO:0043231 GO:GO:0016021 GO:GO:0009737 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009789 GO:GO:0046872 GO:GO:0009651
GO:GO:0009414 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0031090 EMBL:AL132975
UniGene:At.28462 UniGene:At.48772 EMBL:AF386995 EMBL:BT006305
EMBL:AK317055 IPI:IPI00546001 PIR:T47692 RefSeq:NP_191112.1
ProteinModelPortal:Q9M2S6 SMR:Q9M2S6 STRING:Q9M2S6
EnsemblPlants:AT3G55530.1 GeneID:824718 KEGG:ath:AT3G55530
TAIR:At3g55530 eggNOG:NOG316504 HOGENOM:HOG000005982
InParanoid:Q9M2S6 KO:K16283 OMA:RAMRIHA PhylomeDB:Q9M2S6
ProtClustDB:CLSN2685302 Genevestigator:Q9M2S6 Uniprot:Q9M2S6
Length = 273
Score = 145 (56.1 bits), Expect = 7.3e-10, P = 7.3e-10
Identities = 30/72 (41%), Positives = 39/72 (54%)
Query: 78 TSSVMRVLMPVFRFSSKDCNED-TCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSH 136
TSS ++ S K ++ TC+VCL GE VR LP CLH FH CID WL
Sbjct: 187 TSSSAEKMLDSANESKKGTEDELTCSVCLEQVTVGEIVRTLP-CLHQFHAGCIDPWLRQQ 245
Query: 137 SNCPLCRANANA 148
CP+C+ A++
Sbjct: 246 GTCPVCKFRAHS 257
>UNIPROTKB|Q68DV7 [details] [associations]
symbol:RNF43 "E3 ubiquitin-protein ligase RNF43"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005887 "integral to plasma membrane" evidence=IDA] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=IMP] [GO:0038018 "Wnt receptor catabolic process"
evidence=IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IDA]
[GO:0005109 "frizzled binding" evidence=IPI] [GO:0072089 "stem cell
proliferation" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005635 GO:GO:0005887
GO:GO:0016055 GO:GO:0005789 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
GO:GO:0042787 GO:GO:0072089 EMBL:AB081837 EMBL:AK000322
EMBL:AK291027 EMBL:AK296769 EMBL:AK298789 EMBL:AK299024
EMBL:CR627423 EMBL:CR749257 EMBL:BC109028 IPI:IPI00744070
IPI:IPI00930185 IPI:IPI00930238 IPI:IPI00930434 RefSeq:NP_060233.3
UniGene:Hs.584916 ProteinModelPortal:Q68DV7 SMR:Q68DV7
IntAct:Q68DV7 STRING:Q68DV7 DMDM:74757361 PRIDE:Q68DV7
Ensembl:ENST00000407977 Ensembl:ENST00000500597
Ensembl:ENST00000577625 Ensembl:ENST00000577716
Ensembl:ENST00000583753 Ensembl:ENST00000584437 GeneID:54894
KEGG:hsa:54894 UCSC:uc002iwf.3 UCSC:uc010dcw.3 UCSC:uc010wnv.2
CTD:54894 GeneCards:GC17M056429 HGNC:HGNC:18505 HPA:HPA008079
MIM:612482 neXtProt:NX_Q68DV7 PharmGKB:PA34441 eggNOG:NOG329235
HOVERGEN:HBG093916 InParanoid:Q68DV7 KO:K15694 OMA:YLLGPSR
OrthoDB:EOG4N04FJ PhylomeDB:Q68DV7 ChiTaRS:RNF43 GenomeRNAi:54894
NextBio:57898 Bgee:Q68DV7 CleanEx:HS_RNF43 Genevestigator:Q68DV7
GO:GO:0038018 Uniprot:Q68DV7
Length = 783
Score = 153 (58.9 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 92 SSKDCNE-DTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
S C+ CA+CL +F EG+++RV+ CLH FH C+D WL H CPLC N
Sbjct: 262 SGSSCSSAPVCAICLEEFSEGQELRVI-SCLHEFHRNCVDPWLHQHRTCPLCMFN 315
>MGI|MGI:2442609 [details] [associations]
symbol:Rnf43 "ring finger protein 43" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005109 "frizzled binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005887 "integral to plasma membrane"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IMP] [GO:0038018 "Wnt receptor catabolic process"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072089 "stem
cell proliferation" evidence=IMP] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:2442609
Prosite:PS00518 GO:GO:0005635 GO:GO:0005887 GO:GO:0016055
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0042787
GO:GO:0072089 EMBL:AL596086 EMBL:CU393486 EMBL:AL604022
GeneTree:ENSGT00530000063291 CTD:54894 eggNOG:NOG329235
HOVERGEN:HBG093916 KO:K15694 OMA:YLLGPSR OrthoDB:EOG4N04FJ
GO:GO:0038018 EMBL:AK028750 EMBL:AK032782 EMBL:BC029717
EMBL:BC075707 IPI:IPI00272698 IPI:IPI00626683 IPI:IPI00875921
RefSeq:NP_766036.2 UniGene:Mm.440230 ProteinModelPortal:Q5NCP0
SMR:Q5NCP0 DIP:DIP-59915N PRIDE:Q5NCP0 Ensembl:ENSMUST00000040089
Ensembl:ENSMUST00000092800 Ensembl:ENSMUST00000165679 GeneID:207742
KEGG:mmu:207742 UCSC:uc007kue.2 HOGENOM:HOG000246992
InParanoid:B2KGH3 NextBio:372023 Bgee:Q5NCP0 CleanEx:MM_RNF43
Genevestigator:Q5NCP0 Uniprot:Q5NCP0
Length = 784
Score = 153 (58.9 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 26/55 (47%), Positives = 34/55 (61%)
Query: 92 SSKDCNED-TCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
S C+ CA+CL +F EG+++RV+ CLH FH C+D WL H CPLC N
Sbjct: 262 SGSSCSSTPVCAICLEEFSEGQELRVI-SCLHEFHRTCVDPWLYQHRTCPLCMFN 315
>TAIR|locus:2133877 [details] [associations]
symbol:AT4G26580 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AK227805 IPI:IPI00524845 RefSeq:NP_001190848.1
RefSeq:NP_194388.2 UniGene:At.23121 UniGene:At.67112
ProteinModelPortal:Q0WSW1 SMR:Q0WSW1 EnsemblPlants:AT4G26580.1
EnsemblPlants:AT4G26580.2 GeneID:828765 KEGG:ath:AT4G26580
eggNOG:NOG314995 OMA:RPVWPMR ProtClustDB:CLSN2690028
Genevestigator:Q0WSW1 Uniprot:Q0WSW1
Length = 335
Score = 147 (56.8 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 92 SSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
SS+ N+ C +CL +KE E+VR LP C H FH+ C+D WL S CPLC+
Sbjct: 280 SSQANNDPECCICLAKYKEKEEVRKLP-CSHRFHLKCVDQWLRIISCCPLCK 330
>TAIR|locus:2014726 [details] [associations]
symbol:AT1G35630 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008233
"peptidase activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0008233 KO:K15692 IPI:IPI00527054
RefSeq:NP_174800.2 UniGene:At.49941 ProteinModelPortal:F4HZZ5
SMR:F4HZZ5 PRIDE:F4HZZ5 EnsemblPlants:AT1G35630.1 GeneID:840463
KEGG:ath:AT1G35630 OMA:ICIDDYC Uniprot:F4HZZ5
Length = 318
Score = 146 (56.5 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 34/84 (40%), Positives = 45/84 (53%)
Query: 72 PRDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDM 131
PRD ++ S V V SS TCA+C+ D+ GE++R+LP C H +H CID
Sbjct: 208 PRDLLQ-SMPTEVYSGVLEESSTSV---TCAICIDDYCVGEKLRILP-CKHKYHAVCIDS 262
Query: 132 WLSS-HSNCPLCRAN---ANAAPP 151
WL S CP+C+ N N PP
Sbjct: 263 WLGRCRSFCPVCKQNPRTGNDVPP 286
>MGI|MGI:3039616 [details] [associations]
symbol:Znrf3 "zinc and ring finger 3" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005109 "frizzled binding" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005887 "integral
to plasma membrane" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISO] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IMP] [GO:0038018 "Wnt receptor catabolic process"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IMP] [GO:0060071 "Wnt receptor signaling pathway, planar
cell polarity pathway" evidence=IMP] [GO:0072089 "stem cell
proliferation" evidence=IMP] [GO:0090090 "negative regulation of
canonical Wnt receptor signaling pathway" evidence=ISO] [GO:2000051
"negative regulation of non-canonical Wnt receptor signaling
pathway" evidence=ISO] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:3039616
Prosite:PS00518 GO:GO:0005887 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0090090
HSSP:Q9LRB7 eggNOG:COG5540 GO:GO:0004842 GO:GO:0060070
EMBL:AL662876 GO:GO:0072089 GO:GO:0060071 EMBL:AL662853
GeneTree:ENSGT00530000063291 GO:GO:0038018 CTD:84133
HOGENOM:HOG000155811 HOVERGEN:HBG082538 KO:K16273 OMA:GNPSAVC
OrthoDB:EOG48D0TP GO:GO:2000051 EMBL:AK133342 EMBL:BC151080
EMBL:BC151083 IPI:IPI00606016 IPI:IPI00828435 RefSeq:NP_001074393.1
UniGene:Mm.216313 ProteinModelPortal:Q5SSZ7 SMR:Q5SSZ7
PhosphoSite:Q5SSZ7 PRIDE:Q5SSZ7 Ensembl:ENSMUST00000109867
Ensembl:ENSMUST00000172492 GeneID:407821 KEGG:mmu:407821
UCSC:uc007hwj.2 UCSC:uc007hwk.2 InParanoid:Q5SSZ7 NextBio:407279
Bgee:Q5SSZ7 CleanEx:MM_ZNRF3 Genevestigator:Q5SSZ7 Uniprot:Q5SSZ7
Length = 913
Score = 142 (55.0 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
CA+CL + +GE++RV+P C H FH C+D WL H CP CR N
Sbjct: 290 CAICLEKYIDGEELRVIP-CTHRFHRKCVDPWLLQHHTCPHCRHN 333
Score = 36 (17.7 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 16 PLLIGLLGVIAG 27
PLL+GLL AG
Sbjct: 35 PLLLGLLLAAAG 46
>TAIR|locus:2097830 [details] [associations]
symbol:SIS3 "SUGAR-INSENSITIVE 3" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0010182 "sugar mediated signaling pathway"
evidence=IMP] [GO:0016567 "protein ubiquitination" evidence=IDA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0010413 "glucuronoxylan metabolic process" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
[GO:0045492 "xylan biosynthetic process" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0010182
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
EMBL:AL049658 EMBL:AK117391 IPI:IPI00536247 PIR:T06684
RefSeq:NP_190382.2 UniGene:At.21725 ProteinModelPortal:Q8GYT9
SMR:Q8GYT9 STRING:Q8GYT9 PaxDb:Q8GYT9 PRIDE:Q8GYT9
EnsemblPlants:AT3G47990.1 GeneID:823954 KEGG:ath:AT3G47990
TAIR:At3g47990 eggNOG:NOG317826 HOGENOM:HOG000077621
InParanoid:Q8GYT9 KO:K16284 OMA:INWKRYR PhylomeDB:Q8GYT9
ProtClustDB:CLSN2680356 Genevestigator:Q8GYT9 Uniprot:Q8GYT9
Length = 358
Score = 147 (56.8 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 29/62 (46%), Positives = 36/62 (58%)
Query: 86 MPVFRFSS--KDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+P FR + DC E C +CL +F G +VR LP C H FHV CID WL + CP CR
Sbjct: 220 LPKFRLKAVPDDCGE--CLICLEEFHIGHEVRGLP-CAHNFHVECIDQWLRLNVKCPRCR 276
Query: 144 AN 145
+
Sbjct: 277 CS 278
>UNIPROTKB|Q9ULT6 [details] [associations]
symbol:ZNRF3 "E3 ubiquitin-protein ligase ZNRF3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IEA] [GO:0060071 "Wnt receptor signaling pathway,
planar cell polarity pathway" evidence=IEA] [GO:0038018 "Wnt
receptor catabolic process" evidence=IMP] [GO:0072089 "stem cell
proliferation" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IMP] [GO:2000051 "negative
regulation of non-canonical Wnt receptor signaling pathway"
evidence=IMP] [GO:0005887 "integral to plasma membrane"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005109 "frizzled binding" evidence=IPI] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005887 GO:GO:0016055 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0090090 HSSP:Q9LRB7 eggNOG:COG5540 GO:GO:0004842
GO:GO:0072089 EMBL:AL021393 GO:GO:0038018 EMBL:AK096397 EMBL:Z95113
EMBL:AL031596 EMBL:AB051436 EMBL:CR456397 EMBL:BC021570
EMBL:BC069019 EMBL:BC094857 IPI:IPI00853368 RefSeq:NP_001193927.1
RefSeq:NP_115549.2 UniGene:Hs.604200 UniGene:Hs.655242
UniGene:Hs.732114 ProteinModelPortal:Q9ULT6 SMR:Q9ULT6
DIP:DIP-50030N IntAct:Q9ULT6 MINT:MINT-2877014 STRING:Q9ULT6
PhosphoSite:Q9ULT6 DMDM:126253847 PaxDb:Q9ULT6 PRIDE:Q9ULT6
DNASU:84133 Ensembl:ENST00000332811 Ensembl:ENST00000402174
Ensembl:ENST00000406323 Ensembl:ENST00000544604 GeneID:84133
KEGG:hsa:84133 UCSC:uc003aeg.3 CTD:84133 GeneCards:GC22P029279
HGNC:HGNC:18126 HPA:HPA036703 MIM:612062 neXtProt:NX_Q9ULT6
PharmGKB:PA134983897 HOGENOM:HOG000155811 HOVERGEN:HBG082538
InParanoid:Q9ULT6 KO:K16273 OMA:GNPSAVC OrthoDB:EOG48D0TP
GenomeRNAi:84133 NextBio:73429 ArrayExpress:Q9ULT6 Bgee:Q9ULT6
CleanEx:HS_ZNRF3 Genevestigator:Q9ULT6 GO:GO:2000051 Uniprot:Q9ULT6
Length = 936
Score = 142 (55.0 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
CA+CL + +GE++RV+P C H FH C+D WL H CP CR N
Sbjct: 293 CAICLEKYIDGEELRVIP-CTHRFHRKCVDPWLLQHHTCPHCRHN 336
Score = 36 (17.7 bits), Expect = 9.5e-10, Sum P(2) = 9.5e-10
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 16 PLLIGLLGVIAG 27
PLL+GLL AG
Sbjct: 38 PLLLGLLLAAAG 49
>UNIPROTKB|I3LB70 [details] [associations]
symbol:LOC100738472 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:FP340171
Ensembl:ENSSSCT00000030994 Uniprot:I3LB70
Length = 577
Score = 150 (57.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 91 FSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
F D + TC+VC+ ++ EG ++R LP C H +HV CID WLS +S CP+CR
Sbjct: 514 FGENDALK-TCSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICR 564
>UNIPROTKB|F1NRC6 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0060816 "random
inactivation of X chromosome" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 GeneTree:ENSGT00700000104290 OMA:RNFGESD
GO:GO:0060816 EMBL:AADN02013542 IPI:IPI00573322
Ensembl:ENSGALT00000012569 Uniprot:F1NRC6
Length = 593
Score = 150 (57.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 91 FSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
F D + TC+VC+ ++ EG ++R LP C H +HV CID WLS +S CP+CR
Sbjct: 530 FGESDALK-TCSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICR 580
>UNIPROTKB|D4A8S6 [details] [associations]
symbol:Rlim "Protein Rlim" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1559832 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 IPI:IPI00947970 Ensembl:ENSRNOT00000067009
ArrayExpress:D4A8S6 Uniprot:D4A8S6
Length = 597
Score = 150 (57.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 91 FSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
F D + TC+VC+ ++ EG ++R LP C H +HV CID WLS +S CP+CR
Sbjct: 534 FGENDALK-TCSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICR 584
>MGI|MGI:1342291 [details] [associations]
symbol:Rlim "ring finger protein, LIM domain interacting"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IGI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0060816 "random inactivation of X
chromosome" evidence=ISO;IDA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1342291
Prosite:PS00518 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 GO:GO:0000122 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433 eggNOG:COG5540
GO:GO:0004842 EMBL:CH466564 KO:K16271 GeneTree:ENSGT00700000104290
CTD:51132 HOGENOM:HOG000273881 OrthoDB:EOG48SGSW GO:GO:0060816
EMBL:AF069992 EMBL:AK013207 EMBL:AK029295 EMBL:AL805911
EMBL:BC012960 IPI:IPI00123915 RefSeq:NP_035406.3 UniGene:Mm.427762
UniGene:Mm.490660 ProteinModelPortal:Q9WTV7 SMR:Q9WTV7
DIP:DIP-46445N STRING:Q9WTV7 PhosphoSite:Q9WTV7 PRIDE:Q9WTV7
Ensembl:ENSMUST00000070705 Ensembl:ENSMUST00000121153 GeneID:19820
KEGG:mmu:19820 UCSC:uc009tzz.1 InParanoid:Q9CYY2 NextBio:297281
Bgee:Q9WTV7 CleanEx:MM_RNF12 Genevestigator:Q9WTV7
GermOnline:ENSMUSG00000056537 Uniprot:Q9WTV7
Length = 600
Score = 150 (57.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 91 FSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
F D + TC+VC+ ++ EG ++R LP C H +HV CID WLS +S CP+CR
Sbjct: 537 FGENDALK-TCSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICR 587
>RGD|1559832 [details] [associations]
symbol:Rlim "ring finger protein, LIM domain interacting"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0060816 "random inactivation of
X chromosome" evidence=ISO] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 RGD:1559832 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
eggNOG:COG5540 GO:GO:0004842 EMBL:CH473969 HOVERGEN:HBG009886
KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
HOGENOM:HOG000273881 OMA:RNFGESD OrthoDB:EOG48SGSW GO:GO:0060816
EMBL:BC097491 IPI:IPI00362010 RefSeq:NP_001020063.1
RefSeq:XP_003752129.1 UniGene:Rn.85539 Ensembl:ENSRNOT00000003782
GeneID:100910646 GeneID:317241 KEGG:rno:100910646 KEGG:rno:317241
UCSC:RGD:1559832 InParanoid:Q4V889 NextBio:671483
Genevestigator:Q4V889 Uniprot:Q4V889
Length = 603
Score = 150 (57.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 91 FSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
F D + TC+VC+ ++ EG ++R LP C H +HV CID WLS +S CP+CR
Sbjct: 540 FGENDALK-TCSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICR 590
>UNIPROTKB|E1BBI7 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060816 "random inactivation of X chromosome"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
OMA:RNFGESD GO:GO:0060816 EMBL:DAAA02072549 IPI:IPI00705444
RefSeq:NP_001179251.1 UniGene:Bt.25074 ProteinModelPortal:E1BBI7
Ensembl:ENSBTAT00000020757 GeneID:539871 KEGG:bta:539871
NextBio:20878271 Uniprot:E1BBI7
Length = 611
Score = 150 (57.9 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 91 FSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
F D + TC+VC+ ++ EG ++R LP C H +HV CID WLS +S CP+CR
Sbjct: 548 FGENDALK-TCSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICR 598
>UNIPROTKB|F1RPK6 [details] [associations]
symbol:LOC100738472 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132 OMA:RNFGESD
EMBL:CU856210 RefSeq:XP_003135236.1 RefSeq:XP_003360418.1
RefSeq:XP_003484178.1 UniGene:Ssc.9094 Ensembl:ENSSSCT00000013579
GeneID:100511426 GeneID:100738472 KEGG:ssc:100511426
KEGG:ssc:100738472 Uniprot:F1RPK6
Length = 623
Score = 150 (57.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 91 FSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
F D + TC+VC+ ++ EG ++R LP C H +HV CID WLS +S CP+CR
Sbjct: 560 FGENDALK-TCSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICR 610
>UNIPROTKB|Q9NVW2 [details] [associations]
symbol:RLIM "E3 ubiquitin-protein ligase RLIM" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=NAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0003714
"transcription corepressor activity" evidence=NAS] [GO:0060816
"random inactivation of X chromosome" evidence=IDA] [GO:0005634
"nucleus" evidence=ISS;IDA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 GO:GO:0000122 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0043433 eggNOG:COG5540 GO:GO:0004842
EMBL:CH471104 KO:K16271 EMBL:AF155109 EMBL:AJ271670 EMBL:AK001334
EMBL:AL513007 EMBL:BC013357 IPI:IPI00060628 RefSeq:NP_057204.2
RefSeq:NP_899196.1 UniGene:Hs.653288 ProteinModelPortal:Q9NVW2
SMR:Q9NVW2 IntAct:Q9NVW2 MINT:MINT-233446 STRING:Q9NVW2
PhosphoSite:Q9NVW2 DMDM:143811451 PaxDb:Q9NVW2 PRIDE:Q9NVW2
DNASU:51132 Ensembl:ENST00000332687 Ensembl:ENST00000349225
GeneID:51132 KEGG:hsa:51132 UCSC:uc004ebu.3 CTD:51132
GeneCards:GC0XM073803 HGNC:HGNC:13429 HPA:HPA018895 MIM:300379
neXtProt:NX_Q9NVW2 PharmGKB:PA164725373 HOGENOM:HOG000273881
InParanoid:Q9NVW2 OMA:RNFGESD OrthoDB:EOG48SGSW PhylomeDB:Q9NVW2
ChiTaRS:RLIM GenomeRNAi:51132 NextBio:53967 Bgee:Q9NVW2
CleanEx:HS_RNF12 Genevestigator:Q9NVW2 GermOnline:ENSG00000131263
GO:GO:0060816 Uniprot:Q9NVW2
Length = 624
Score = 150 (57.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 91 FSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
F D + TC+VC+ ++ EG ++R LP C H +HV CID WLS +S CP+CR
Sbjct: 561 FGENDALK-TCSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICR 611
>UNIPROTKB|E2RSZ0 [details] [associations]
symbol:RLIM "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060816 "random inactivation of X chromosome"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0000122
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0043433
GO:GO:0004842 KO:K16271 GeneTree:ENSGT00700000104290 CTD:51132
OMA:RNFGESD GO:GO:0060816 EMBL:AAEX03026523 RefSeq:XP_859444.2
ProteinModelPortal:E2RSZ0 Ensembl:ENSCAFT00000027241 GeneID:491965
KEGG:cfa:491965 NextBio:20864655 Uniprot:E2RSZ0
Length = 625
Score = 150 (57.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 91 FSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
F D + TC+VC+ ++ EG ++R LP C H +HV CID WLS +S CP+CR
Sbjct: 562 FGENDALK-TCSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICR 612
>UNIPROTKB|J9NV71 [details] [associations]
symbol:LOC491808 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00700000104290 OMA:SICITEY
EMBL:AAEX03026256 RefSeq:XP_855008.1 ProteinModelPortal:J9NV71
Ensembl:ENSCAFT00000045760 GeneID:491808 KEGG:cfa:491808
Uniprot:J9NV71
Length = 625
Score = 150 (57.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 23/43 (53%), Positives = 33/43 (76%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
C++C+ ++ EG ++R+LP C H FHV CID WLS +S CP+CR
Sbjct: 571 CSICITEYTEGNRLRILP-CSHEFHVHCIDHWLSENSTCPICR 612
>UNIPROTKB|Q07G42 [details] [associations]
symbol:rnf12 "E3 ubiquitin-protein ligase RNF12"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000578 "embryonic
axis specification" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0042802 "identical protein
binding" evidence=ISS] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0042802
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540 GO:GO:0004842
GO:GO:0008134 GO:GO:0042787 GO:GO:0000578 HOVERGEN:HBG009886
KO:K16271 CTD:51132 HOGENOM:HOG000273881 EMBL:CR762181
RefSeq:NP_001016091.1 UniGene:Str.64802 ProteinModelPortal:Q07G42
STRING:Q07G42 GeneID:548845 KEGG:xtr:548845 Xenbase:XB-GENE-492020
Uniprot:Q07G42
Length = 639
Score = 150 (57.9 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 91 FSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
F D + TC+VC+ ++ EG ++R LP C H +HV CID WLS +S CP+CR
Sbjct: 576 FGENDALK-TCSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICR 626
>UNIPROTKB|E1C2S8 [details] [associations]
symbol:RNF6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0030424
"axon" evidence=IEA] [GO:0030517 "negative regulation of axon
extension" evidence=IEA] [GO:0044314 "protein K27-linked
ubiquitination" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0070936 "protein
K48-linked ubiquitination" evidence=IEA] [GO:0085020 "protein
K6-linked ubiquitination" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 GO:GO:0005737
GO:GO:0045893 GO:GO:0046872 GO:GO:0003677 GO:GO:0016605
GO:GO:0030424 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0006511 GO:GO:0004842 GO:GO:0060765 GO:GO:0070936
GO:GO:0085020 GO:GO:0044314 GeneTree:ENSGT00700000104290
OMA:TIRIPLR EMBL:AADN02005166 IPI:IPI00592288
Ensembl:ENSGALT00000027631 Uniprot:E1C2S8
Length = 673
Score = 150 (57.9 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 100 TCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
TC+VC+ ++ G ++R LP C+H FH+ CID WLS +S CP+CR
Sbjct: 619 TCSVCINEYVTGNKLRQLP-CMHEFHIHCIDRWLSENSTCPICR 661
>POMBASE|SPBP4H10.07 [details] [associations]
symbol:SPBP4H10.07 "ubiquitin-protein ligase E3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=ISM] [GO:0016020 "membrane" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISM]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
PomBase:SPBP4H10.07 Prosite:PS00518 GO:GO:0016020 GO:GO:0046872
EMBL:CU329671 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 eggNOG:NOG291583 EMBL:AB027922 RefSeq:NP_596181.1
ProteinModelPortal:Q9P7E1 EnsemblFungi:SPBP4H10.07.1 GeneID:2541304
KEGG:spo:SPBP4H10.07 OrthoDB:EOG4FFHBH NextBio:20802414
Uniprot:Q9P7E1
Length = 583
Score = 149 (57.5 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 31/67 (46%), Positives = 40/67 (59%)
Query: 88 VFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSN-CPLCRAN- 145
VF FS D + C VCL +F+ ++ R L +C H FH CID WL+S N CPLCR
Sbjct: 515 VFPFSGTD---ERCLVCLSNFELNDECRRLKQCNHFFHRECIDQWLTSSQNSCPLCRTKG 571
Query: 146 -ANAAPP 151
A+A+ P
Sbjct: 572 VASASTP 578
>TAIR|locus:2173497 [details] [associations]
symbol:AT5G37200 "AT5G37200" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0016757
"transferase activity, transferring glycosyl groups" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG246550
HOGENOM:HOG000131725 EMBL:AP000605 IPI:IPI00517594
RefSeq:NP_198536.1 UniGene:At.55180 ProteinModelPortal:Q9FG51
SMR:Q9FG51 EnsemblPlants:AT5G37200.1 GeneID:833694
KEGG:ath:AT5G37200 TAIR:At5g37200 InParanoid:Q9FG51
PhylomeDB:Q9FG51 ProtClustDB:CLSN2686890 Genevestigator:Q9FG51
Uniprot:Q9FG51
Length = 217
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 28/70 (40%), Positives = 40/70 (57%)
Query: 78 TSSVMRVLMPVFRFSSKDCNED--TCAVCLGDFKEGEQ--VRVLPECLHLFHVPCIDMWL 133
+ V L+ R S D E+ TC++C+ F E + +RV P+CLHLFH C+ WL
Sbjct: 134 SGEVFHRLVEEQRVESADLEEEDETCSICIEKFSESHEDIIRV-PDCLHLFHQGCLFEWL 192
Query: 134 SSHSNCPLCR 143
++CPLCR
Sbjct: 193 GLQNSCPLCR 202
>ZFIN|ZDB-GENE-040426-1277 [details] [associations]
symbol:rnf11a "ring finger protein 11a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
ZFIN:ZDB-GENE-040426-1277 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 HOVERGEN:HBG058444
EMBL:BC053118 IPI:IPI00485593 RefSeq:NP_957315.1 UniGene:Dr.85919
ProteinModelPortal:Q7T3H3 GeneID:393996 KEGG:dre:393996 CTD:393996
InParanoid:Q7T3H3 NextBio:20814964 ArrayExpress:Q7T3H3
Uniprot:Q7T3H3
Length = 146
Score = 139 (54.0 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 25/58 (43%), Positives = 34/58 (58%)
Query: 92 SSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAA 149
S K E C +C+ DF+ G+ +R LP C+H++HV CID WL CP C +AA
Sbjct: 84 SDKKIKE--CVICMMDFEYGDPIRFLP-CMHIYHVDCIDAWLMRSFTCPSCMEPVDAA 138
>TAIR|locus:2016044 [details] [associations]
symbol:AT1G71980 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008233
"peptidase activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0008233 HSSP:Q9LRB7
eggNOG:COG5540 OMA:DSWLTSW KO:K15692 HOGENOM:HOG000242534
EMBL:AY065385 EMBL:AY133843 IPI:IPI00547851 RefSeq:NP_177343.2
UniGene:At.16178 ProteinModelPortal:Q8VZ14 SMR:Q8VZ14 PRIDE:Q8VZ14
EnsemblPlants:AT1G71980.1 GeneID:843529 KEGG:ath:AT1G71980
TAIR:At1g71980 InParanoid:Q8VZ14 PhylomeDB:Q8VZ14
ProtClustDB:CLSN2718099 ArrayExpress:Q8VZ14 Genevestigator:Q8VZ14
Uniprot:Q8VZ14
Length = 448
Score = 147 (56.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 86 MPVFRFSSKDCNED-----TCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSS-HSNC 139
MP FSS +ED TCA+CL D+ G+++R+LP C H FH C+D WL+S + C
Sbjct: 214 MPSLIFSS--FHEDNTTAFTCAICLEDYTVGDKLRLLP-CCHKFHAACVDSWLTSWRTFC 270
Query: 140 PLCRANANAAP--PP 152
P+C+ +A + PP
Sbjct: 271 PVCKRDARTSTGEPP 285
>TAIR|locus:2133697 [details] [associations]
symbol:AT4G09560 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008233
"peptidase activity" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 Pfam:PF02225 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0008233 eggNOG:COG5540
KO:K15692 EMBL:AK228945 IPI:IPI00541549 RefSeq:NP_192694.2
UniGene:At.33685 ProteinModelPortal:Q0WPW5 SMR:Q0WPW5 PRIDE:Q0WPW5
EnsemblPlants:AT4G09560.1 GeneID:826540 KEGG:ath:AT4G09560
TAIR:At4g09560 HOGENOM:HOG000242534 InParanoid:Q0WPW5 OMA:SSHELPI
PhylomeDB:Q0WPW5 ProtClustDB:CLSN2920286 Genevestigator:Q0WPW5
Uniprot:Q0WPW5
Length = 448
Score = 147 (56.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 28/77 (36%), Positives = 47/77 (61%)
Query: 77 RTSSVMRVLMPVFRFSSKDCNEDT----CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMW 132
R M + MP F+ C+E T C +CL ++++G+++R+LP C H FHV C+D+W
Sbjct: 207 RMPKSMIIRMPTTIFNGI-CDEATTSILCCICLENYEKGDKLRILP-CHHKFHVACVDLW 264
Query: 133 LSSHSN-CPLCRANANA 148
L + CP+C+ +A +
Sbjct: 265 LGQRKSFCPVCKRDARS 281
>UNIPROTKB|E1BHK5 [details] [associations]
symbol:RNF149 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104211
CTD:284996 KO:K15704 OMA:GCAPDTR EMBL:DAAA02030204 IPI:IPI00715011
RefSeq:XP_002691197.1 ProteinModelPortal:E1BHK5
Ensembl:ENSBTAT00000010882 GeneID:506267 KEGG:bta:506267
NextBio:20867529 Uniprot:E1BHK5
Length = 393
Score = 146 (56.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
D + ++CAVC+ +FK + +R+LP C H+FH CID WL H CP+C+
Sbjct: 256 DVDAESCAVCIENFKGRDVIRILP-CKHIFHRICIDPWLLDHRTCPMCK 303
>UNIPROTKB|Q641J8 [details] [associations]
symbol:rnf12-a "E3 ubiquitin-protein ligase RNF12-A"
species:8355 "Xenopus laevis" [GO:0000578 "embryonic axis
specification" evidence=IMP] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0016567 "protein ubiquitination" evidence=ISS] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IDA] [GO:0042802 "identical protein
binding" evidence=IPI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842 GO:GO:0042787
GO:GO:0000578 EMBL:AB114039 EMBL:BC082339 RefSeq:NP_001082725.1
UniGene:Xl.11908 ProteinModelPortal:Q641J8 GeneID:398680
KEGG:xla:398680 CTD:398680 Xenbase:XB-GENE-866117
HOVERGEN:HBG009886 KO:K16271 Uniprot:Q641J8
Length = 622
Score = 149 (57.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 91 FSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
F D + TC+VC+ ++ EG ++R LP C H +H+ CID WLS +S CP+CR
Sbjct: 559 FGENDALK-TCSVCITEYTEGNKLRKLP-CSHEYHIHCIDRWLSENSTCPICR 609
>UNIPROTKB|B4DDP0 [details] [associations]
symbol:RNF6 "cDNA FLJ53858, highly similar to RING finger
protein 6" species:9606 "Homo sapiens" [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AL138966
RefSeq:NP_898864.1 UniGene:Hs.136885 DNASU:6049 GeneID:6049
KEGG:hsa:6049 CTD:6049 HGNC:HGNC:10069 PharmGKB:PA34443
GenomeRNAi:6049 NextBio:23569 EMBL:AK293272 IPI:IPI01012568
ProteinModelPortal:B4DDP0 SMR:B4DDP0 STRING:B4DDP0
Ensembl:ENST00000399762 UCSC:uc010tdk.2 HOVERGEN:HBG102156
ArrayExpress:B4DDP0 Bgee:B4DDP0 Uniprot:B4DDP0
Length = 329
Score = 144 (55.7 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
C+VC+ D+ G ++R LP C+H FH+ CID WLS + CP+CR
Sbjct: 276 CSVCISDYVTGNKLRQLP-CMHEFHIHCIDRWLSENCTCPICR 317
>UNIPROTKB|F1SDD6 [details] [associations]
symbol:F1SDD6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 EMBL:CU467072
Ensembl:ENSSSCT00000007331 OMA:HRANERS Uniprot:F1SDD6
Length = 231
Score = 120 (47.3 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 22/43 (51%), Positives = 25/43 (58%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
C VC D+ E+VR LP C H FH CI WL H CP+CR
Sbjct: 155 CPVCKEDYTVEEEVRQLP-CNHFFHSSCIVPWLELHDACPVCR 196
Score = 36 (17.7 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 24 VIAGFMMVATYHCIS 38
+IAGF+ + + C+S
Sbjct: 75 IIAGFIPGSPFSCLS 89
>UNIPROTKB|F1S6C0 [details] [associations]
symbol:LOC100620409 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104290 EMBL:FP016256 RefSeq:XP_003357420.1
RefSeq:XP_003357421.1 Ensembl:ENSSSCT00000016632
Ensembl:ENSSSCT00000026015 GeneID:100620318 GeneID:100620409
KEGG:ssc:100620318 KEGG:ssc:100620409 Uniprot:F1S6C0
Length = 141
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 92 SSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPP 151
S + ++ CA+C DF G+ +R LP C H +H+ CID WL+ CP CR A+ P
Sbjct: 77 SQEKMEQEECAICTLDFVCGDPIRSLP-CKHFYHLGCIDEWLTRSFTCPYCRGPADGPQP 135
>TAIR|locus:2094108 [details] [associations]
symbol:DNF "DAY NEUTRAL FLOWERING" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0048577 "negative
regulation of short-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
EMBL:AP000419 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0048577
GO:GO:0004842 HOGENOM:HOG000034170 EMBL:DQ086855 IPI:IPI00529417
RefSeq:NP_188545.1 UniGene:At.65108 ProteinModelPortal:Q9LJL6
SMR:Q9LJL6 EnsemblPlants:AT3G19140.1 GeneID:821448
KEGG:ath:AT3G19140 TAIR:At3g19140 eggNOG:NOG276244
InParanoid:Q9LJL6 OMA:FRCCLAY PhylomeDB:Q9LJL6
ProtClustDB:CLSN2915360 Genevestigator:Q9LJL6 GermOnline:AT3G19140
Uniprot:Q9LJL6
Length = 141
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 30/79 (37%), Positives = 40/79 (50%)
Query: 86 MPVFRFSSKDCNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRA 144
+PV F++ ++ C VCL F + ++ RVLP C H FH D WL S CP CR
Sbjct: 63 IPVVSFNANAFKDNIECVVCLSKFIDEDKARVLPSCNHCFHFDFTDTWLHSDYTCPNCRK 122
Query: 145 NANAAPPPHLVLTL-PDSG 162
N L L+ P+SG
Sbjct: 123 NVEEIQNHELSLSPNPNSG 141
>ZFIN|ZDB-GENE-040426-1024 [details] [associations]
symbol:rnf181 "ring finger protein 181"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 ZFIN:ZDB-GENE-040426-1024 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:COG5540
GeneTree:ENSGT00530000062967 CTD:51255 HOGENOM:HOG000031081
HOVERGEN:HBG108412 OMA:EEQYRQN OrthoDB:EOG40VVQW EMBL:CU041374
EMBL:BC050161 IPI:IPI00492404 IPI:IPI00890554 RefSeq:NP_956600.1
UniGene:Dr.84789 ProteinModelPortal:Q7ZW78 STRING:Q7ZW78
Ensembl:ENSDART00000029450 Ensembl:ENSDART00000134728
Ensembl:ENSDART00000140392 GeneID:393276 KEGG:dre:393276
InParanoid:Q7ZW78 NextBio:20814333 Bgee:Q7ZW78 Uniprot:Q7ZW78
Length = 156
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 86 MPVFRFSSKDCNEDT-CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
+PV S + ++ C VCL +F+E E VR +P C HLFH CI WL+ ++CPLCR
Sbjct: 63 LPVVIISPEQADKGVKCPVCLLEFEEQESVREMP-CKHLFHTGCILPWLNKTNSCPLCR 120
>RGD|2320624 [details] [associations]
symbol:LOC100364637 "ring finger protein 148-like" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 RGD:2320624 Pfam:PF02225 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104211 IPI:IPI00960085
Ensembl:ENSRNOT00000064228 Uniprot:F1M1T7
Length = 309
Score = 143 (55.4 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
D NED+C VC +K + +R+L C H FH CID WL +H CP+C+ +
Sbjct: 256 DPNEDSCVVCFDIYKAQDVIRILT-CKHFFHKTCIDPWLLAHRTCPMCKCD 305
>UNIPROTKB|Q6ZSG1 [details] [associations]
symbol:RNF165 "RING finger protein 165" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AC018931 EMBL:AK127467 EMBL:AK122819
EMBL:AC015959 EMBL:AC021763 IPI:IPI00161541 RefSeq:NP_001243687.1
RefSeq:NP_689683.2 UniGene:Hs.501114 ProteinModelPortal:Q6ZSG1
SMR:Q6ZSG1 IntAct:Q6ZSG1 STRING:Q6ZSG1 DMDM:74762404 PRIDE:Q6ZSG1
Ensembl:ENST00000269439 Ensembl:ENST00000543885 GeneID:494470
KEGG:hsa:494470 UCSC:uc002lby.1 CTD:494470 GeneCards:GC18P043914
HGNC:HGNC:31696 neXtProt:NX_Q6ZSG1 PharmGKB:PA134972127
eggNOG:NOG243435 HOGENOM:HOG000154155 HOVERGEN:HBG093904
InParanoid:Q6ZSG1 OMA:FSHQLQT OrthoDB:EOG4J6RRC PhylomeDB:Q6ZSG1
GenomeRNAi:494470 NextBio:111870 ArrayExpress:Q6ZSG1 Bgee:Q6ZSG1
CleanEx:HS_RNF165 Genevestigator:Q6ZSG1 GermOnline:ENSG00000141622
Uniprot:Q6ZSG1
Length = 346
Score = 144 (55.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 98 EDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
++ C +CL ++GE VR LP C+HLFH C+D WL+ CP+CR +
Sbjct: 291 DEKCTICLSMLEDGEDVRRLP-CMHLFHQLCVDQWLAMSKKCPICRVD 337
>UNIPROTKB|F1PHU2 [details] [associations]
symbol:RNF165 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FSHQLQT EMBL:AAEX03005372
EMBL:AAEX03005373 Ensembl:ENSCAFT00000027965 Uniprot:F1PHU2
Length = 347
Score = 144 (55.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 98 EDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
++ C +CL ++GE VR LP C+HLFH C+D WL+ CP+CR +
Sbjct: 292 DEKCTICLSMLEDGEDVRRLP-CMHLFHQLCVDQWLAMSKKCPICRVD 338
>MGI|MGI:2444521 [details] [associations]
symbol:Rnf165 "ring finger protein 165" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:2444521
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 UniGene:Mm.23293 GeneTree:ENSGT00670000097625
CTD:494470 eggNOG:NOG243435 OMA:FSHQLQT EMBL:AC102135 EMBL:AK133955
IPI:IPI00266063 RefSeq:NP_001157976.1 ProteinModelPortal:E9QAU8
SMR:E9QAU8 PRIDE:E9QAU8 Ensembl:ENSMUST00000026494 GeneID:225743
KEGG:mmu:225743 HOGENOM:HOG000171096 HOVERGEN:HBG101911
NextBio:377780 Bgee:E9QAU8 Uniprot:E9QAU8
Length = 347
Score = 144 (55.7 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 98 EDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
++ C +CL ++GE VR LP C+HLFH C+D WL+ CP+CR +
Sbjct: 292 DEKCTICLSMLEDGEDVRRLP-CMHLFHQLCVDQWLAMSKKCPICRVD 338
>RGD|1560744 [details] [associations]
symbol:Rnf165 "ring finger protein 165" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1560744 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 OMA:FSHQLQT IPI:IPI00367219
Ensembl:ENSRNOT00000028929 Uniprot:E9PSS3
Length = 348
Score = 144 (55.7 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 98 EDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
++ C +CL ++GE VR LP C+HLFH C+D WL+ CP+CR +
Sbjct: 293 DEKCTICLSMLEDGEDVRRLP-CMHLFHQLCVDQWLAMSKKCPICRVD 339
>UNIPROTKB|F1STG1 [details] [associations]
symbol:LOC100519085 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104211
OMA:GCAPDTR EMBL:CU407202 EMBL:CU424450 Ensembl:ENSSSCT00000008945
Uniprot:F1STG1
Length = 392
Score = 145 (56.1 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
D + + CAVC+ +FK + +R+LP C H+FH CID WL H CP+C+
Sbjct: 257 DVDAENCAVCIENFKVKDVIRILP-CKHIFHRICIDPWLLDHRTCPMCK 304
>MGI|MGI:2677438 [details] [associations]
symbol:Rnf149 "ring finger protein 149" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
InterPro:IPR003137 MGI:MGI:2677438 Pfam:PF02225 Prosite:PS00518
GO:GO:0016021 GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9H0F5
eggNOG:NOG302028 GeneTree:ENSGT00700000104211 HOGENOM:HOG000231432
HOVERGEN:HBG057659 EMBL:AC119809 CTD:284996 KO:K15704 OMA:GCAPDTR
EMBL:AK155360 EMBL:BC115968 EMBL:AY155439 IPI:IPI00340505
IPI:IPI00808180 RefSeq:NP_001028307.2 UniGene:Mm.28614
ProteinModelPortal:Q3U2C5 SMR:Q3U2C5 PhosphoSite:Q3U2C5
PRIDE:Q3U2C5 Ensembl:ENSMUST00000062525 GeneID:67702 KEGG:mmu:67702
UCSC:uc007atl.2 InParanoid:Q3U2C5 OrthoDB:EOG44TP86 NextBio:325301
Bgee:Q3U2C5 CleanEx:MM_RNF149 Genevestigator:Q3U2C5
GermOnline:ENSMUSG00000048234 Uniprot:Q3U2C5
Length = 394
Score = 145 (56.1 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
D + + CAVC+ +FK + +R+LP C H+FH CID WL H CP+C+
Sbjct: 259 DVDAENCAVCIENFKVKDVIRILP-CKHIFHRICIDPWLLDHRTCPMCK 306
>RGD|1308460 [details] [associations]
symbol:Rnf149 "ring finger protein 149" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 RGD:1308460 Pfam:PF02225 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104211 CTD:284996 KO:K15704 OMA:GCAPDTR
OrthoDB:EOG44TP86 IPI:IPI00366942 RefSeq:XP_001058362.1
RefSeq:XP_343562.3 UniGene:Rn.231919 Ensembl:ENSRNOT00000018684
GeneID:363222 KEGG:rno:363222 UCSC:RGD:1308460 NextBio:682888
Uniprot:D3ZI66
Length = 394
Score = 145 (56.1 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCR 143
D + + CAVC+ +FK + +R+LP C H+FH CID WL H CP+C+
Sbjct: 259 DVDAENCAVCIENFKVKDVIRILP-CKHIFHRICIDPWLLDHRTCPMCK 306
>MGI|MGI:1918550 [details] [associations]
symbol:Rnf148 "ring finger protein 148" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 MGI:MGI:1918550 Pfam:PF02225
Prosite:PS00518 GO:GO:0016021 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CH466533
GeneTree:ENSGT00700000104211 HOGENOM:HOG000231432
HOVERGEN:HBG057659 CTD:378925 eggNOG:NOG254647 OMA:IDPWLLA
EMBL:AY155440 EMBL:AK017027 EMBL:AC155850 RefSeq:NP_082030.1
UniGene:Mm.443309 ProteinModelPortal:G3X9R7 SMR:G3X9R7 PRIDE:G3X9R7
Ensembl:ENSMUST00000104979 GeneID:71300 KEGG:mmu:71300
NextBio:333489 Bgee:G3X9R7 Uniprot:G3X9R7
Length = 316
Score = 143 (55.4 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
D NED+C VC +K + +R+L C H FH CID WL +H CP+C+ +
Sbjct: 263 DPNEDSCVVCFDMYKAQDVIRILT-CKHFFHKTCIDPWLLAHRTCPMCKCD 312
>UNIPROTKB|F1RPS5 [details] [associations]
symbol:RNF165 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 EMBL:FP015922
Ensembl:ENSSSCT00000004974 Uniprot:F1RPS5
Length = 327
Score = 143 (55.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 98 EDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
++ C +CL ++GE VR LP C+HLFH C+D WL+ CP+CR +
Sbjct: 272 DEKCTICLSLLEDGEDVRRLP-CMHLFHQLCVDQWLAMSKKCPICRVD 318
>UNIPROTKB|I3LPH2 [details] [associations]
symbol:RNF165 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00670000097625 OMA:FSHQLQT EMBL:FP015922
Ensembl:ENSSSCT00000022369 Uniprot:I3LPH2
Length = 329
Score = 143 (55.4 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 98 EDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRAN 145
++ C +CL ++GE VR LP C+HLFH C+D WL+ CP+CR +
Sbjct: 274 DEKCTICLSLLEDGEDVRRLP-CMHLFHQLCVDQWLAMSKKCPICRVD 320
>UNIPROTKB|F1P4V3 [details] [associations]
symbol:RNF149 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
InterPro:IPR003137 Pfam:PF02225 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104211
OMA:GCAPDTR EMBL:AADN02017721 EMBL:AADN02017722 IPI:IPI00597608
Ensembl:ENSGALT00000027090 Uniprot:F1P4V3
Length = 419
Score = 145 (56.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 28/73 (38%), Positives = 42/73 (57%)
Query: 95 DCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAA----- 149
D + + CAVC+ ++K + VR+LP C H+FH CID WL H CP+C+ + A
Sbjct: 278 DVDVENCAVCIENYKLKDTVRILP-CKHIFHRTCIDPWLLDHRTCPMCKLDVIKALGYWG 336
Query: 150 -PPPHLVLTLPDS 161
P L + +P+S
Sbjct: 337 DPEDALEVPIPES 349
>UNIPROTKB|G5E5R5 [details] [associations]
symbol:G5E5R5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000051 "negative regulation of non-canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0072089 "stem cell proliferation" evidence=IEA]
[GO:0060071 "Wnt receptor signaling pathway, planar cell polarity
pathway" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IEA] [GO:0038018 "Wnt receptor
catabolic process" evidence=IEA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=IEA] [GO:0005109 "frizzled binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005887 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006511 GO:GO:0090090 GO:GO:0004842
GeneTree:ENSGT00530000063291 OMA:GNPSAVC GO:GO:2000051
EMBL:DAAA02045596 EMBL:DAAA02045597 Ensembl:ENSBTAT00000028780
Uniprot:G5E5R5
Length = 796
Score = 149 (57.5 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 28/59 (47%), Positives = 36/59 (61%)
Query: 101 CAVCLGDFKEGEQVRVLPECLHLFHVPCIDMWLSSHSNCPLCRANANAAPPPHLVLTLP 159
CA+CL + +GE++RV+P C H FH C+D WL H CP CR N P L L+LP
Sbjct: 158 CAICLEKYIDGEELRVIP-CTHRFHRKCVDPWLLQHHTCPHCRHNIIGNAP--LPLSLP 213
>UNIPROTKB|Q8WWF5 [details] [associations]
symbol:ZNRF4 "Zinc/RING finger protein 4" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
Prosite:PS00518 GO:GO:0016021 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 EMBL:CH471139 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 HOVERGEN:HBG063762 EMBL:AK292251 EMBL:AC005764
EMBL:BC017592 IPI:IPI00328204 RefSeq:NP_859061.3 UniGene:Hs.126496
ProteinModelPortal:Q8WWF5 SMR:Q8WWF5 IntAct:Q8WWF5 STRING:Q8WWF5
DMDM:126253848 PRIDE:Q8WWF5 Ensembl:ENST00000222033 GeneID:148066
KEGG:hsa:148066 UCSC:uc002mca.4 CTD:148066 GeneCards:GC19P005407
HGNC:HGNC:17726 HPA:HPA012844 MIM:612063 neXtProt:NX_Q8WWF5
PharmGKB:PA134943871 eggNOG:NOG285926 HOGENOM:HOG000013159
InParanoid:Q8WWF5 KO:K15715 OMA:DPWFSQA OrthoDB:EOG4FTW0T
PhylomeDB:Q8WWF5 GenomeRNAi:148066 NextBio:85823 Bgee:Q8WWF5
CleanEx:HS_ZNRF4 Genevestigator:Q8WWF5 Uniprot:Q8WWF5
Length = 429
Score = 145 (56.1 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 31/103 (30%), Positives = 51/103 (49%)
Query: 73 RDRIRTSSVMRVLMPVFRFSSKDCNEDTCAVCLGDFKEGEQVRVLPECLHLFHVPCIDMW 132
R ++TS+ + + F + + D CA+CL +++EG+Q+++LP C H +H CID W
Sbjct: 286 RRPVKTSTCQKAQVRTFTW-----HNDLCAICLDEYEEGDQLKILP-CSHTYHCKCIDPW 339
Query: 133 LSS--HSNCPLCRANANAAPPPHLVLTLPDSGGAPQPEFHRAP 173
S +CP+C+ + A T P HR P
Sbjct: 340 FSQAPRRSCPVCKQSVAATEDSFDSTTYSFRDEDPSLPGHRPP 382
WARNING: HSPs involving 312 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.140 0.464 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 176 163 0.00084 107 3 11 22 0.49 31
30 0.44 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 562
No. of states in DFA: 610 (65 KB)
Total size of DFA: 180 KB (2103 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.30u 0.11s 16.41t Elapsed: 00:00:01
Total cpu time: 16.31u 0.11s 16.42t Elapsed: 00:00:01
Start: Fri May 10 05:22:38 2013 End: Fri May 10 05:22:39 2013
WARNINGS ISSUED: 2