Query 040169
Match_columns 459
No_of_seqs 117 out of 1211
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 08:52:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040169.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040169hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rtk_A 60 kDa chaperonin 2; he 100.0 1.7E-95 6E-100 780.5 38.7 416 5-458 47-511 (546)
2 1kp8_A Groel protein; chaperon 100.0 1.2E-94 4.2E-99 775.0 38.6 418 5-458 47-513 (547)
3 1iok_A Chaperonin 60; chaperon 100.0 1.2E-94 4.2E-99 775.2 34.9 419 5-458 48-515 (545)
4 1we3_A CPN60(groel); chaperoni 100.0 1.3E-93 4.3E-98 767.5 39.5 418 5-458 47-515 (543)
5 3p9d_C T-complex protein 1 sub 100.0 8.1E-81 2.8E-85 672.8 27.5 397 4-458 55-576 (590)
6 3iyg_A T-complex protein 1 sub 100.0 5.3E-77 1.8E-81 638.0 35.1 368 5-458 47-518 (529)
7 3iyg_E T-complex protein 1 sub 100.0 1.3E-76 4.6E-81 633.3 35.7 366 5-458 47-505 (515)
8 3ko1_A Chaperonin; 9-fold symm 100.0 5.2E-77 1.8E-81 640.4 31.8 366 5-458 67-523 (553)
9 3ruv_A Chaperonin, CPN; double 100.0 6.3E-77 2.1E-81 639.0 32.3 366 5-458 56-509 (543)
10 3aq1_B Thermosome subunit; gro 100.0 3.6E-77 1.2E-81 635.4 29.4 366 5-458 10-466 (500)
11 3p9d_A T-complex protein 1 sub 100.0 1.7E-77 5.8E-82 645.2 26.5 368 5-458 61-538 (559)
12 3iyg_B T-complex protein 1 sub 100.0 3.4E-76 1.1E-80 629.7 35.3 365 5-458 49-501 (513)
13 3iyg_D T-complex protein 1 sub 100.0 2.9E-76 9.9E-81 630.9 34.7 367 5-458 48-508 (518)
14 1a6d_B Thermosome (beta subuni 100.0 2.5E-76 8.5E-81 634.6 32.8 366 5-458 58-513 (543)
15 1q3q_A Thermosome alpha subuni 100.0 1.7E-76 5.8E-81 636.3 31.4 366 5-458 60-515 (548)
16 3iyg_H T-complex protein 1 sub 100.0 5.9E-76 2E-80 627.9 34.9 366 5-458 48-504 (515)
17 1a6d_A Thermosome (alpha subun 100.0 5.3E-76 1.8E-80 632.1 33.1 366 5-458 59-512 (545)
18 3iyg_Q T-complex protein 1 sub 100.0 1E-75 3.5E-80 626.1 33.6 365 5-458 48-502 (512)
19 3p9d_D T-complex protein 1 sub 100.0 1.2E-76 4E-81 635.0 21.7 369 5-458 56-518 (528)
20 3p9d_E T-complex protein 1 sub 100.0 2.5E-75 8.4E-80 628.7 30.8 366 5-458 82-548 (562)
21 3p9d_B T-complex protein 1 sub 100.0 1E-76 3.5E-81 635.8 18.5 365 5-458 55-508 (527)
22 3iyg_Z T-complex protein 1 sub 100.0 7.5E-75 2.6E-79 619.7 30.9 365 5-458 47-507 (517)
23 3iyg_G T-complex protein 1 sub 100.0 3.2E-74 1.1E-78 614.8 34.1 366 5-458 46-504 (515)
24 3p9d_G T-complex protein 1 sub 100.0 1.1E-74 3.7E-79 622.3 20.2 365 5-458 61-517 (550)
25 3p9d_F T-complex protein 1 sub 100.0 4.9E-74 1.7E-78 617.2 21.2 366 5-458 54-527 (546)
26 3p9d_H T-complex protein 1 sub 100.0 3.4E-73 1.1E-77 612.8 14.7 366 5-458 63-538 (568)
27 3m6c_A 60 kDa chaperonin 1; ch 100.0 7.6E-40 2.6E-44 302.1 12.0 159 143-301 2-194 (194)
28 3osx_A 60 kDa chaperonin; alph 100.0 3.2E-38 1.1E-42 291.9 14.0 155 146-300 12-200 (201)
29 1srv_A Protein (groel (HSP60 c 99.9 3.3E-27 1.1E-31 208.7 10.6 110 148-257 1-144 (145)
30 1gml_A T-complex protein 1 sub 99.5 1.5E-14 5E-19 134.0 10.9 108 142-262 3-162 (178)
31 1ass_A Thermosome; chaperonin, 99.3 8.7E-12 3E-16 113.3 9.5 102 146-260 1-153 (159)
32 2i15_A A05_ORF129, hypothetica 47.8 33 0.0011 28.2 5.5 59 349-413 68-126 (135)
33 2buf_A Acetylglutamate kinase; 24.0 1.5E+02 0.0052 28.3 7.0 46 291-336 21-71 (300)
34 3rtk_A 60 kDa chaperonin 2; he 23.7 26 0.0009 37.1 1.5 36 2-39 26-68 (546)
35 2ap9_A NAG kinase, acetylgluta 21.2 1.4E+02 0.0048 28.5 6.1 46 291-336 20-70 (299)
No 1
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=1.7e-95 Score=780.51 Aligned_cols=416 Identities=31% Similarity=0.463 Sum_probs=373.9
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| ++|+||||++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 47 ~ITnDG~TIlk~i~v~hp---------~~n~gAkll~e~a~~qd~e~GDGTTtvvVLAgeLL~ea~~li~~GihP~~I~~ 117 (546)
T 3rtk_A 47 TITNDGVSIAKEIELEDP---------YEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKR 117 (546)
T ss_dssp --------------CCCH---------HHHHHHHHHHHHHTSCC-------CHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EEECcHHHHHHHccCCCh---------hhhHHHHHHHHHHHhhhhhhCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 689999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh----------heeccCCCchhHHHHHHHHHHHhccCccEEEEcCCCccceeEEEEeEEEecc
Q 040169 85 EIYMAFEAIKGHLKCRAR----------VGRTAANEDKRIDVLLTEVMEKVGKEGLFIIYDEEKKKNELKFLRGMKLNWG 154 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~----------vA~~ss~~d~~la~li~~av~~vg~~g~I~i~~g~~~~d~~~~v~G~~~~~g 154 (459)
||++|.+.++++|+++++ +|++|++ ++.+++++++|+.+++.+|.|.++.+++..+++++++||+||++
T Consensus 118 G~~~A~~~a~e~L~~~s~~v~~~e~L~~vA~iS~~-~~~i~~liadAv~~V~~dgvI~Ve~~~~~~~ds~lveGm~fdkg 196 (546)
T 3rtk_A 118 GIEKAVEKVTETLLKGAKEVETKEQIAATAAISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKG 196 (546)
T ss_dssp HHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHHSCTTSEEEEECCSSSSCEEEEECEEEESCC
T ss_pred HHHHHHHHHHHHHHHhcccCCChHHHHhHeEEeCC-chHHHHHHHHHHHHhccCCceEEEecCCcccceEEeeeEEEcCC
Confidence 999999999999999875 7788887 88999999999999999999999988777789999999999999
Q ss_pred ccccccccc-cccc-------c-----------------------CCCEEEEeccchhhHHHHHHHhhhcccccEEEecC
Q 040169 155 AVSSFFIDD-ETQT-------C-----------------------KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKP 203 (459)
Q Consensus 155 ~~~~~~~~~-~~~~-------~-----------------------~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~ 203 (459)
|.||||+++ +++. + ++||+|++++|+++++++|+.|+++|++++++||.
T Consensus 197 ~~sp~~vt~~e~m~~~len~kIll~d~kIs~~~~l~~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~ 276 (546)
T 3rtk_A 197 YISGYFVTDPERQEAVLEDPYILLVSSKVSTVKDLLPLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKA 276 (546)
T ss_dssp BSSGGGCSBTTTTBEEEESCEEEEBSSEECCSTTTHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEEC
T ss_pred ccCcccccCcccCeeEecccEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEecc
Confidence 999999765 4332 1 78999999999999999999999999999999999
Q ss_pred CCccccccchHHHHHHHhCCeEeeecccc---ccccccceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHHHhcCC
Q 040169 204 PEFEENCKGIMQDLAVLTGGWVVTAESNS---LLARLKLGSCKEVVILDNEMVILGGSGSQADIEKRCEQLRSAIKASTS 280 (459)
Q Consensus 204 ~~~~~~r~~~ledla~~tG~~v~~~~~~~---~l~~~~LG~a~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~ 280 (459)
|+|+++|+.+|+|||++|||++++++.++ ++++++||+|+.|++++++++|+++|++++++..|+++|+++++.+++
T Consensus 277 ~~~~~~rk~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s 356 (546)
T 3rtk_A 277 PGFGDRRKAMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVVVTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDS 356 (546)
T ss_dssp SSCHHHHHHHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEEECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSC
T ss_pred ccccccchhhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEEEcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999964333 245889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHHHHHHHHHhCCcccCCCcccccCcccchhHHHHHHHHHH
Q 040169 281 DYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNALNAVKAAMEGGIIPENSSQVCWQPFASFDLFVYFLSLAV 355 (459)
Q Consensus 281 ~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl~~~k~a~~~gvVpGGG~~e~~~~~~~~~~~~~~~~~~~ 355 (459)
+||+++|+|||++|+|++|||+|||+|+ ++|+++||||++|+++++|+|||||++|
T Consensus 357 ~~~~ekl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~giVpGGGa~e------------------- 417 (546)
T 3rtk_A 357 DYDREKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVTL------------------- 417 (546)
T ss_dssp HHHHHHHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHH-------------------
T ss_pred hhhHHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcHHH-------------------
Confidence 9999999999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccccccchhhHHhhcCCchhHHHHHHHHHHHhhHHHHHHHhcCCChHHHHHHHHhcCCCCeeEecCCCcccccccc
Q 040169 356 IRVLMYPRARYYDLDKLQTTSLGGKIGVQLLQQALKMPVCTIASATGVDGSAVAEKLLEQDNPDVGYDPARGEYVDVIKL 435 (459)
Q Consensus 356 ~~~~~~~s~~~~~L~~~~~~~~~e~~gi~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~~~~~~Gid~~~g~~~d~~~~ 435 (459)
++++ ..|++|+ .++++|+|+++|++||+.||++||+|||+|+.+++++|++. ..++|||+.+|+|.||++.
T Consensus 418 ----~~~s---~~L~~~~-~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~Dm~~~ 488 (546)
T 3rtk_A 418 ----LQAA---PTLDELK-LEGDEATGANIVKVALEAPLKQIAFNSGLEPGVVAEKVRNL-PAGHGLNAQTGVYEDLLAA 488 (546)
T ss_dssp ----HTTG---GGSTTSC-CCTTHHHHHHHHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS-CTTEECCSSSCCCEETTTT
T ss_pred ----HHHH---HHHHHhc-cccHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh-cCCEeEcCCCCcEeeHHHc
Confidence 9999 9999987 78999999999999999999999999999999999999986 3469999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHhhc
Q 040169 436 GIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 436 gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
|||||++||+++|++|+++|+++
T Consensus 489 gI~dp~~vk~~al~~A~e~A~~i 511 (546)
T 3rtk_A 489 GVADPVKVTRSALQNAASIAGLF 511 (546)
T ss_dssp TCEEEHHHHHHHHHHHHHHHHHH
T ss_pred CCEecHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999875
No 2
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=1.2e-94 Score=775.02 Aligned_cols=418 Identities=32% Similarity=0.490 Sum_probs=397.3
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||+|+|++.|| |||++|||++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 47 ~ITnDG~tIlk~i~~~hp---------~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~lv~~GihP~~I~~ 117 (547)
T 1kp8_A 47 TITKDGVSVAREIELEDK---------FENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKR 117 (547)
T ss_dssp EEECCHHHHHHHCCCSSH---------HHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred EEEcCHHHHHHHccccCh---------hhhHHHHHHHHHHHhhccccCCCcchhHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 579999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh----------heeccCCCchhHHHHHHHHHHHhccCccEEEEcCCCccceeEEEEeEEEecc
Q 040169 85 EIYMAFEAIKGHLKCRAR----------VGRTAANEDKRIDVLLTEVMEKVGKEGLFIIYDEEKKKNELKFLRGMKLNWG 154 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~----------vA~~ss~~d~~la~li~~av~~vg~~g~I~i~~g~~~~d~~~~v~G~~~~~g 154 (459)
||++|.+.++++|+++++ +|++|++++++|++++++|+.+++.++.|.+++|+++.+++++++|++|++|
T Consensus 118 G~~~A~~~a~~~L~~~s~~v~~~e~l~~vA~iS~~~~~~i~~liadAv~~V~~dg~I~Ve~G~~~~ds~~lveG~~fdkg 197 (547)
T 1kp8_A 118 GIDKAVTVAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRG 197 (547)
T ss_dssp HHHHHHHHHHHHHHHHCBCCCSHHHHHHHHHHHTTSCHHHHHHHHHHHHHHCTTSEEEEECCSSSSCEEEEESCEEESCC
T ss_pred HHHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHhccchhHHHHHHHHHHHHhCcCCcEEEEeCCccccccEEEecEEEecC
Confidence 999999999999999886 7788988899999999999999999999999999999887799999999999
Q ss_pred ccccccccc-ccccc------------------------------CCCEEEEeccchhhHHHHHHHhhhcccccEEEecC
Q 040169 155 AVSSFFIDD-ETQTC------------------------------KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKP 203 (459)
Q Consensus 155 ~~~~~~~~~-~~~~~------------------------------~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~ 203 (459)
|+||||+++ +++.. ++||+|++++|+++++++|+.|++++.+++++||.
T Consensus 198 ~~~p~~vt~~~~m~~~lenp~Ill~d~~Is~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~ 277 (547)
T 1kp8_A 198 YLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKA 277 (547)
T ss_dssp BSSTTCCSBTTTTBEEEESCEEECEESEECCGGGTHHHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEEC
T ss_pred ccccccccCcccCceEecCceEEEEcCcCCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEec
Confidence 999999766 44221 89999999999999999999999999999999999
Q ss_pred CCccccccchHHHHHHHhCCeEeeecccc---ccccccceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHHHhcCC
Q 040169 204 PEFEENCKGIMQDLAVLTGGWVVTAESNS---LLARLKLGSCKEVVILDNEMVILGGSGSQADIEKRCEQLRSAIKASTS 280 (459)
Q Consensus 204 ~~~~~~r~~~ledla~~tG~~v~~~~~~~---~l~~~~LG~a~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~ 280 (459)
|+|+++|+++|+|||++|||++++++.+. ++++++||+|+.|++++++++|+++|+++++++.|+++|+.+++.+++
T Consensus 278 ~~~~~~rk~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s 357 (547)
T 1kp8_A 278 PGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATS 357 (547)
T ss_dssp SSCHHHHHHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCS
T ss_pred cccccccHHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEEccceEEEEcCCCCHHHHHHHHHHHHHHhhcccc
Confidence 99999999999999999999999974333 344889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHHHHHHHHHhCCcccCCCcccccCcccchhHHHHHHHHHH
Q 040169 281 DYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNALNAVKAAMEGGIIPENSSQVCWQPFASFDLFVYFLSLAV 355 (459)
Q Consensus 281 ~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl~~~k~a~~~gvVpGGG~~e~~~~~~~~~~~~~~~~~~~ 355 (459)
+|||++|+|||++|+|+++||++||+|+ ++|++|||||++|+++++|+|||||++|
T Consensus 358 ~~~~ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e------------------- 418 (547)
T 1kp8_A 358 DYDREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVAL------------------- 418 (547)
T ss_dssp HHHHHHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHH-------------------
T ss_pred hhhHHHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCCEEeCCcHHH-------------------
Confidence 9999999999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccccccchhhHHhhcCCchhHHHHHHHHHHHhhHHHHHHHhcCCChHHHHHHHHhcCCCCeeEecCCCcccccccc
Q 040169 356 IRVLMYPRARYYDLDKLQTTSLGGKIGVQLLQQALKMPVCTIASATGVDGSAVAEKLLEQDNPDVGYDPARGEYVDVIKL 435 (459)
Q Consensus 356 ~~~~~~~s~~~~~L~~~~~~~~~e~~gi~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~~~~~~Gid~~~g~~~d~~~~ 435 (459)
++++ ..|++++..++++|+|+++|++||+.||++||+|||+|+.+++++|++. +.++|||+.+|+|+||++.
T Consensus 419 ----~~~s---~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~-~~~~G~d~~~g~~~dm~~~ 490 (547)
T 1kp8_A 419 ----IRVA---SKLADLRGQNADQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGG-DGNYGYNAATEEYGNMIDM 490 (547)
T ss_dssp ----HHHH---HHTTTCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS-CTTEEEETTTTEEEETTTT
T ss_pred ----HHHH---HHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc-CCCEeEeCCCCccccchhc
Confidence 9999 9999886668899999999999999999999999999999999999976 5689999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHhhc
Q 040169 436 GIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 436 gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
|||||++||+++|++|+++|+++
T Consensus 491 gI~Dp~~vk~~al~~A~~~A~~i 513 (547)
T 1kp8_A 491 GILDPTKVTRSALQYAASVAGLM 513 (547)
T ss_dssp TCEEEHHHHHHHHHHHHHHHHHH
T ss_pred CceechHhHHHHHHHHHHHHHHH
Confidence 99999999999999999999875
No 3
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.2e-94 Score=775.18 Aligned_cols=419 Identities=32% Similarity=0.517 Sum_probs=373.6
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| |||++|||++++|++||+++||||||++|||++||++|.+++.+|+||+.|++
T Consensus 48 ~iTnDG~tIlk~i~~~hp---------~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~ea~~li~~GihP~~I~~ 118 (545)
T 1iok_A 48 RITKDGVSVAKEIELSDK---------FENMGAQMVREVASRTNDEAGDGTTTATVLAQAIVREGLKAVAAGMNPMDLKR 118 (545)
T ss_dssp EEECCHHHHHHHCCCSSH---------HHHHHHHHHHHHHHHGGGGCSTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred EEeCCHHHHHHHhccCCh---------hhHHHHHHHHHHHHhhccccCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 579999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh----------heeccCCCchhHHHHHHHHHHHhccCccEEEEcCCCccceeEEEEeEEEecc
Q 040169 85 EIYMAFEAIKGHLKCRAR----------VGRTAANEDKRIDVLLTEVMEKVGKEGLFIIYDEEKKKNELKFLRGMKLNWG 154 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~----------vA~~ss~~d~~la~li~~av~~vg~~g~I~i~~g~~~~d~~~~v~G~~~~~g 154 (459)
||++|.+.++++|+++++ +|++|++++++|++++++|+.+++.++.|.+++|+++.+++++++|++|++|
T Consensus 119 G~~~A~~~a~~~L~~~s~~v~~~e~l~~va~iS~~~~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lveG~~~dkg 198 (545)
T 1iok_A 119 GIDVATAKVVEAIKSAARPVNDSSEVAQVGTISANGESFIGQQIAEAMQRVGNEGVITVEENKGMETEVEVVEGMQFDRG 198 (545)
T ss_dssp HHHHHHHHHHHHHHTTCBCCCSTTTTTHHHHHTTTTCHHHHHHHHHHHHHHCTTSCCCCEECSSSCCEEEEECCEECSCC
T ss_pred HHHHHHHHHHHHHHHhcccCCCHHHHHHHHHhhcCCchhHHHHHHHHHHHhccCCeEEEEeCCccccceEEEecEEEecC
Confidence 999999999999999886 7788988899999999999999999999999999999887799999999999
Q ss_pred ccccccccc-cccc-------c-----------------------CCCEEEEeccchhhHHHHHHHhhhcccccEEEecC
Q 040169 155 AVSSFFIDD-ETQT-------C-----------------------KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKP 203 (459)
Q Consensus 155 ~~~~~~~~~-~~~~-------~-----------------------~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~ 203 (459)
|+||||+++ +++. + ++||+|++++|+++++++|+.|++++.+++++||.
T Consensus 199 ~~~p~~vt~~~~m~~~~en~~Ill~d~~I~~~~~l~~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~ 278 (545)
T 1iok_A 199 YLSPYFVTNADKMIAELEDAYILLHEKKLSSLQPMVPLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKA 278 (545)
T ss_dssp CSCGGGCCCSSSSCEEEEEEEEEECSSCBCCCCC-----------CCCCEEEESCBC-----------------CEEEEC
T ss_pred ccccccccCcccCceeecCCeEEEEcCCcCCHHHHHHHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEec
Confidence 999998665 4321 1 78999999999999999999999999999999999
Q ss_pred CCccccccchHHHHHHHhCCeEeeecccc---ccccccceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHHHhcCC
Q 040169 204 PEFEENCKGIMQDLAVLTGGWVVTAESNS---LLARLKLGSCKEVVILDNEMVILGGSGSQADIEKRCEQLRSAIKASTS 280 (459)
Q Consensus 204 ~~~~~~r~~~ledla~~tG~~v~~~~~~~---~l~~~~LG~a~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~ 280 (459)
|+|+++|+++|+|||++|||++++++.+. ++++++||+|+.|++++++|+|+++|+++++++.|+++|+.+++.+++
T Consensus 279 ~~~~~~~~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s 358 (545)
T 1iok_A 279 PGFGDRRKAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSINKDNTTIVDGAGEKAEIEARVSQIRQQIEETTS 358 (545)
T ss_dssp SCCTTHHHHHHHHHHHHHTC---------------CTTSEEEEEEEECSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCC
T ss_pred chhhhccHHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEEecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCc
Confidence 99999999999999999999999874332 244789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHHHHHHHHHhCCcccCCCcccccCcccchhHHHHHHHHHH
Q 040169 281 DYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNALNAVKAAMEGGIIPENSSQVCWQPFASFDLFVYFLSLAV 355 (459)
Q Consensus 281 ~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl~~~k~a~~~gvVpGGG~~e~~~~~~~~~~~~~~~~~~~ 355 (459)
+|||++|+|||++|+|+++||++||+|+ ++|++|||||++|+++++|+|||||++|
T Consensus 359 ~~~~ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~giVpGGGa~e------------------- 419 (545)
T 1iok_A 359 DYDREKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEGIVVGGGVAL------------------- 419 (545)
T ss_dssp SSHHHHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHH-------------------
T ss_pred hhhHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHH-------------------
Confidence 9999999999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccccccchhhHHhhcCCchhHHHHHHHHHHHhhHHHHHHHhcCCChHHHHHHHHhcCCCCeeEecCCCcccccccc
Q 040169 356 IRVLMYPRARYYDLDKLQTTSLGGKIGVQLLQQALKMPVCTIASATGVDGSAVAEKLLEQDNPDVGYDPARGEYVDVIKL 435 (459)
Q Consensus 356 ~~~~~~~s~~~~~L~~~~~~~~~e~~gi~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~~~~~~Gid~~~g~~~d~~~~ 435 (459)
++++ ..|++++..++++|+|+++|++||+.||++||+|||+|+.+++++|++.+++++|||+.+|+|+||++.
T Consensus 420 ----~~~s---~~L~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~~~~~G~d~~~g~~~dm~~~ 492 (545)
T 1iok_A 420 ----VQGA---KVLEGLSGANSDQDAGIAIIRRALEAPMRQIAENAGVDGAVVAGKVRESSDKAFGFNAQTEEYGDMFKF 492 (545)
T ss_dssp ----HHHG---GGGGSCCCSSHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCCSTTEEEETTTTEEEEHHHH
T ss_pred ----HHHH---HHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhcCCCeeEeCCCCcccchHhc
Confidence 9999 999988666889999999999999999999999999999999999997656789999999999999999
Q ss_pred CcccchHHHHHHHHHHHHHHhhc
Q 040169 436 GIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 436 gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
|||||++||+++|++|+++|+++
T Consensus 493 gI~dp~~vk~~al~~A~~~A~~i 515 (545)
T 1iok_A 493 GVIDPAKVVRTALEDAASVAGLL 515 (545)
T ss_dssp TCEEEHHHHHHHHHHHHHHHHHH
T ss_pred CcEEccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999875
No 4
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=1.3e-93 Score=767.49 Aligned_cols=418 Identities=31% Similarity=0.513 Sum_probs=396.7
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||+|+|++.|| |||++|||++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 47 ~ITnDG~tIlk~i~~~hp---------~en~~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~ea~~li~~GihP~~I~~ 117 (543)
T 1we3_A 47 TITKDGVTVAKEVELEDH---------LENIGAQLLKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPLALKR 117 (543)
T ss_dssp EEECCHHHHHHHCCCSSH---------HHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred EEEcCHHHHHHHcccCCh---------HHhHHHHHHHHHHHhhheecCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 579999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh----------heeccCCCchhHHHHHHHHHHHhccCccEEEEcCCCccceeEEEEeEEEecc
Q 040169 85 EIYMAFEAIKGHLKCRAR----------VGRTAANEDKRIDVLLTEVMEKVGKEGLFIIYDEEKKKNELKFLRGMKLNWG 154 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~----------vA~~ss~~d~~la~li~~av~~vg~~g~I~i~~g~~~~d~~~~v~G~~~~~g 154 (459)
||++|.+.++++|+++++ +|++|++ ++.|+++++||+.+++.++.|.+++|+++.+++++++|++|++|
T Consensus 118 G~~~A~~~a~~~L~~~s~~v~~~~~l~~vA~iS~~-~~~i~~li~dAv~~V~~~g~I~Ve~G~~~~ds~~lv~G~~~dkg 196 (543)
T 1we3_A 118 GIEKAVEAAVEKIKALAIPVEDRKAIEEVATISAN-DPEVGKLIADAMEKVGKEGIITVEESKSLETELKFVEGYQFDKG 196 (543)
T ss_dssp HHHHHHHHHHHHHHHTCBCCCSHHHHHHHHHHHHT-CHHHHHHHHHHHHTTCTTSEEEEEECSSSSCEEEEECSEEESCC
T ss_pred HHHHHHHHHHHHHHHhcccCCCHHHHHHhhhhhcC-CHHHHHHHHHHHHHhCcCCcEEEecCCccccceEEEcCEEEecC
Confidence 999999999999999886 7788887 89999999999999999999999999999877799999999999
Q ss_pred ccccccccc-ccccc------------------------------CCCEEEEeccchhhHHHHHHHhhhcccccEEEecC
Q 040169 155 AVSSFFIDD-ETQTC------------------------------KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKP 203 (459)
Q Consensus 155 ~~~~~~~~~-~~~~~------------------------------~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~ 203 (459)
|+||||+++ +++.. ++||+|++++|+++++++|+.|++++.+++++||.
T Consensus 197 ~~~p~~vt~~~~m~~~~en~~Ill~d~~Is~~~~l~~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~ 276 (543)
T 1we3_A 197 YISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKA 276 (543)
T ss_dssp BSSGGGCSBTTTTBCCEEEEEEEEESSCBCCHHHHHHHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEEC
T ss_pred ccccccccCcccCceeecCceEEEECCCcCCHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEec
Confidence 999999766 54321 89999999999999999999999999999999999
Q ss_pred CCccccccchHHHHHHHhCCeEeeecccc---ccccccceeeeEEEEecceEEEEcCCCChhhHHHHHHHHHHHHHhcCC
Q 040169 204 PEFEENCKGIMQDLAVLTGGWVVTAESNS---LLARLKLGSCKEVVILDNEMVILGGSGSQADIEKRCEQLRSAIKASTS 280 (459)
Q Consensus 204 ~~~~~~r~~~ledla~~tG~~v~~~~~~~---~l~~~~LG~a~~v~i~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~ 280 (459)
|+|+++|+++|+|||++|||+++++..++ ++++++||+|+.|++++++++|+++|+++++++.|+++|+.+++.+++
T Consensus 277 ~~~~~~~~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s 356 (543)
T 1we3_A 277 PGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGGKGKKEDIEARINGIKKELETTDS 356 (543)
T ss_dssp SSSHHHHHHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCS
T ss_pred cchhhhhHHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEEEcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCc
Confidence 99999999999999999999999874332 345889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHHHHHHHHHhCCcccCCCcccccCcccchhHHHHHHHHHH
Q 040169 281 DYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNALNAVKAAMEGGIIPENSSQVCWQPFASFDLFVYFLSLAV 355 (459)
Q Consensus 281 ~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl~~~k~a~~~gvVpGGG~~e~~~~~~~~~~~~~~~~~~~ 355 (459)
+|++++|+|||++|+|+++||++||+|+ ++|++|||||++|+++++|+|||||++|
T Consensus 357 ~~~~e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~giVpGGGa~e------------------- 417 (543)
T 1we3_A 357 EYAREKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEGIVPGGGVTL------------------- 417 (543)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHCEEETTTHHH-------------------
T ss_pred hhHHHHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCCCccHHH-------------------
Confidence 9999999999999999999999999998 9999999999999999999999999999
Q ss_pred hhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHhhHHHHHHHhcCCChHHHHHHHHhc-CCCCeeEecCCCcccccc
Q 040169 356 IRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALKMPVCTIASATGVDGSAVAEKLLEQ-DNPDVGYDPARGEYVDVI 433 (459)
Q Consensus 356 ~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~-~~~~~Gid~~~g~~~d~~ 433 (459)
++++ ..|++++. .++++|+|+++|++||+.||++||+|||+|+.+++++|++. ++.++|||+.+|+|+||+
T Consensus 418 ----~~~s---~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~G~d~~~g~~~dm~ 490 (543)
T 1we3_A 418 ----LRAI---SAVEELIKKLEGDEATGAKIVRRALEEPARQIAENAGYEGSVIVQQILAETKNPRYGFNAATGEFVDMV 490 (543)
T ss_dssp ----HHHH---HHHHHHHTTCCHHHHHHHHHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCCSCTTEEEETTTTEEEETT
T ss_pred ----HHHH---HHHHHHhhccCchHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhcCCCCEEEeCCCCeecccc
Confidence 9999 99999986 48999999999999999999999999999999999999975 457899999999999999
Q ss_pred ccCcccchHHHHHHHHHHHHHHhhc
Q 040169 434 KLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 434 ~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
+.|||||++||+++|++|+++|+++
T Consensus 491 ~~gI~dp~~vk~~al~~A~e~a~~i 515 (543)
T 1we3_A 491 EAGIVDPAKVTRSALQNAASIGALI 515 (543)
T ss_dssp TTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred cCCcCccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999875
No 5
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=8.1e-81 Score=672.82 Aligned_cols=397 Identities=16% Similarity=0.178 Sum_probs=326.6
Q ss_pred ccCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHH-HHcCCCHHHH
Q 040169 4 SRLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKV-LEAGVDAMDL 82 (459)
Q Consensus 4 ~~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~l-i~~Gi~P~~I 82 (459)
-++||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.++ +.+|+||+.|
T Consensus 55 ~~ITnDG~TIlk~i~~~hP-------------~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I 121 (590)
T 3p9d_C 55 LVLTNDGHAILREIDVAHP-------------AAKSMLELSRTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVII 121 (590)
T ss_dssp CBCCCCHHHHHHHSCCCCH-------------HHHTHHHHTTTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHH
T ss_pred eEEECCHHHHHHHhhCCCH-------------HHHHHHHHHHhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHH
Confidence 3689999999999999999 9999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhh------------heecc--C----CCchhHHHHHHHHHHHhccCcc--------------
Q 040169 83 KDEIYMAFEAIKGHLKCRAR------------VGRTA--A----NEDKRIDVLLTEVMEKVGKEGL-------------- 130 (459)
Q Consensus 83 ~~G~~~a~~~~l~~L~~~s~------------vA~~s--s----~~d~~la~li~~av~~vg~~g~-------------- 130 (459)
++||++|.+.++++|+++++ +|++| + ++++.|++++++|+.+++.++.
T Consensus 122 ~~G~~~A~~~a~~~L~~~s~~v~~~~~e~L~~vA~tslsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~ 201 (590)
T 3p9d_C 122 IQALKKALTDALEVIKQVSKPVDVENDAAMKKLIQASIGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIK 201 (590)
T ss_dssp HHHHHHHHHHHHHHHHHHCCTTTTCCTHHHHHHHTTTSTTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCS
T ss_pred HHHHHHHHHHHHHHHHHHhhccccCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchh
Confidence 99999999999999999875 66544 3 3589999999999999987642
Q ss_pred --EEE--EcCCCccceeEEEEeEEEeccccccccccc-ccccc-------------------------------------
Q 040169 131 --FII--YDEEKKKNELKFLRGMKLNWGAVSSFFIDD-ETQTC------------------------------------- 168 (459)
Q Consensus 131 --I~i--~~g~~~~d~~~~v~G~~~~~g~~~~~~~~~-~~~~~------------------------------------- 168 (459)
|.+ .+|+++. ++++++||+|++++.+|.|+.. ++.++
T Consensus 202 ~~I~I~ki~Ggs~~-ds~lv~Gmvfdk~~~~~~m~~~~en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l 280 (590)
T 3p9d_C 202 RYVRVEKIPGGDVL-DSRVLKGVLLNKDVVHPKMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQV 280 (590)
T ss_dssp SSSCEEEESSCCGG-GCBCCSSEEECCCCSCTTSCSCEESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHH
T ss_pred hceEEEEecCCCcc-cceeeeEEEEecccCCCCCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHH
Confidence 222 2588874 6789999999999999887655 44332
Q ss_pred ---------CCCEEEEec-cchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeecccccccccc
Q 040169 169 ---------KQPLFIIAE-DVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLK 238 (459)
Q Consensus 169 ---------~~~l~ii~~-~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~ 238 (459)
..|++|+++ +|+++++++|+.+++ ++ |++.|+.+|+|||++|||+++++... +++++
T Consensus 281 ~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I------~a-----v~~~~k~~le~ia~~TGa~iis~l~~--~~~~~ 347 (590)
T 3p9d_C 281 QLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGC------SV-----LRRVKKSDNNRIARVTGATIVNRVED--LKESD 347 (590)
T ss_dssp HHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTC------CC-----CCCCCHHHHHHHHHHHTCCCCSCSTT--CCTTS
T ss_pred HHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccc------ee-----eccCCHHHHHHHHHHhCCceeecccC--CCHHH
Confidence 346677766 499999999987653 34 56778899999999999999998653 56889
Q ss_pred cee-eeEEE---EecceEEEEcCCCChhh--------------------------HHHHHHHHHHHHHhcCCHHHHHHHH
Q 040169 239 LGS-CKEVV---ILDNEMVILGGSGSQAD--------------------------IEKRCEQLRSAIKASTSDYEIKLLE 288 (459)
Q Consensus 239 LG~-a~~v~---i~~~~~~~i~~~~~~~~--------------------------i~~ri~~l~~~i~~~~~~~~~~~l~ 288 (459)
||+ |+.|+ +++++|+|+++|+++++ ++.|+++|+++++.++++|+++
T Consensus 348 LG~~a~~v~~~~ig~d~~~~i~g~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~i~~r~~~i~~~~~~~~~~~~~~--- 424 (590)
T 3p9d_C 348 VGTNCGLFKVEMIGDEYFSFLDNCKEPGSGSGWSHPQFEKGSGKRRWKKNFIAVSAANRFKKISSSGALGSGHHHHH--- 424 (590)
T ss_dssp CBCCCSEEECCEETTEECEEECC---------------------------------------------------------
T ss_pred hCCcCCEEEEEEEcCcEEEEEeCCCCccccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhccCCHHHHH---
Confidence 999 99996 67899999999999988 9999999999999999999965
Q ss_pred HHHHhhcCCeEEEEecCCcc-----chhhhhHHHHHHHHHHhC-CcccCCCcccccCcccchhHHHHHHHHHHhhhhccc
Q 040169 289 ERLLNLSCGALIVKVTGGST-----KNKRIVNALNAVKAAMEG-GIIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYP 362 (459)
Q Consensus 289 eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl~~~k~a~~~-gvVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (459)
+++|+||++||++||+|+ ++|+++||||++|+++++ |+|||||++| +++
T Consensus 425 --~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e-----------------------~~~ 479 (590)
T 3p9d_C 425 --HHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATE-----------------------MAV 479 (590)
T ss_dssp -----CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHH-----------------------HHH
T ss_pred --HHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHH-----------------------HHH
Confidence 478999999999999998 999999999999999998 5999999999 999
Q ss_pred cccchhhHHhhc-CCchhHHHHHHHHHHHhhHHHHHHHhcCCChHHHHHHHHhc---CCCCeeEecCCCccccccccCcc
Q 040169 363 RARYYDLDKLQT-TSLGGKIGVQLLQQALKMPVCTIASATGVDGSAVAEKLLEQ---DNPDVGYDPARGEYVDVIKLGIF 438 (459)
Q Consensus 363 s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~---~~~~~Gid~~~g~~~d~~~~gI~ 438 (459)
+ ..|++|+. .++++|+|+++|++||+.||++||+|||+|+.+++.+|++. +++++|||+.+|+|+||++.|||
T Consensus 480 s---~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~ 556 (590)
T 3p9d_C 480 S---VKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIW 556 (590)
T ss_dssp H---HHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCC
T ss_pred H---HHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCe
Confidence 9 99999874 58999999999999999999999999999999999999874 56789999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHhhc
Q 040169 439 DPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 439 DP~~vk~~al~~A~~~a~~~ 458 (459)
||++||+++|++|+++|+++
T Consensus 557 dp~~vk~~al~~A~e~a~~i 576 (590)
T 3p9d_C 557 EPEVIKQQSVKTAIESACLL 576 (590)
T ss_dssp EEHHHHHHHHHHHHHHHHHT
T ss_pred EcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999986
No 6
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.3e-77 Score=638.02 Aligned_cols=368 Identities=14% Similarity=0.182 Sum_probs=331.1
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 47 ~iTnDG~tIlk~i~v~hP-------------~akll~~~a~~qd~e~GDGTTtvvvLA~eLL~~a~~li~~GihP~~I~~ 113 (529)
T 3iyg_A 47 TITNDGATILKLLEVEHP-------------AAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVIS 113 (529)
T ss_pred EEeCCHHHHHHHcccCCh-------------HHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 689999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-hhh------------heeccC------CCchhHHHHHHHHHHHhc---cCc-----c--EEEE-
Q 040169 85 EIYMAFEAIKGHLKC-RAR------------VGRTAA------NEDKRIDVLLTEVMEKVG---KEG-----L--FIIY- 134 (459)
Q Consensus 85 G~~~a~~~~l~~L~~-~s~------------vA~~ss------~~d~~la~li~~av~~vg---~~g-----~--I~i~- 134 (459)
||++|.+.++++|++ +++ +|++|. +++++|+++++||+.+++ .+| . |.++
T Consensus 114 G~~~A~~~a~~~L~~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k 193 (529)
T 3iyg_A 114 GYRLACKEAVRYISENLIINTDELGRDCLINAAKTSMSSKVIGINGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLK 193 (529)
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccccHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEE
Confidence 999999999999998 664 666552 468999999999999997 233 2 5554
Q ss_pred -cCCCccceeEEEEeEEEeccccccccccc-ccccc--------------------------------------------
Q 040169 135 -DEEKKKNELKFLRGMKLNWGAVSSFFIDD-ETQTC-------------------------------------------- 168 (459)
Q Consensus 135 -~g~~~~d~~~~v~G~~~~~g~~~~~~~~~-~~~~~-------------------------------------------- 168 (459)
+|+++. ++++++||+|+++|.||+|++. ++.++
T Consensus 194 ~~G~~~~-ds~lv~G~v~dk~~~~~~m~~~ien~kIlll~~~le~~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI 272 (529)
T 3iyg_A 194 AHGRSQM-ESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKI 272 (529)
T ss_pred ecCCCcc-ceEEEeeeEEecCcccccCCcccCCceEEEecCCcccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 688774 6899999999999999999877 65544
Q ss_pred ---CCCEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccc----ccccccee
Q 040169 169 ---KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSL----LARLKLGS 241 (459)
Q Consensus 169 ---~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~----l~~~~LG~ 241 (459)
+.|++|++++|+++++++|+.|+ |++|+ +.++.+|+|||++|||+++++..++. +.+++||+
T Consensus 273 ~~~g~nvvi~~~~I~d~al~~L~~~g------I~av~-----~v~k~~leria~~tGa~iv~~~~~l~~~e~~~~~~LG~ 341 (529)
T 3iyg_A 273 LATGANVILTTGGIDDMCLKYFVEAG------AMAVR-----RVLKRDLKRIAKASGATVLSTLANLEGEETFEASMLGQ 341 (529)
T ss_pred HhcCCCEEEECCCCCHHHHHHHHHcC------Cceec-----cCCHHHHHHHHHHhCCeeecchhcccchhccChhhCcc
Confidence 78999999999999999999875 46775 45778999999999999999876533 34788999
Q ss_pred eeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhh
Q 040169 242 CKEVV---ILDNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRI 313 (459)
Q Consensus 242 a~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i 313 (459)
|+.|+ +++++++|+++|+++. .+||++||+|+ .+|++
T Consensus 342 a~~v~~~~ig~~~~~~~~g~~~~~-----------------------------------~~TI~lrG~t~~~l~E~er~l 386 (529)
T 3iyg_A 342 AEEVVQERICDDELILIKNTKART-----------------------------------SASVILRGANDFMCDEMERSL 386 (529)
T ss_pred ceEEEEEEeCCceEEEEEcCCCCc-----------------------------------eEEEEECCchHHHHHHHHHHH
Confidence 99997 7899999999987643 78999999998 99999
Q ss_pred hHHHHHHHHHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhcC-CchhHHHHHHHHHHHh
Q 040169 314 VNALNAVKAAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQTT-SLGGKIGVQLLQQALK 391 (459)
Q Consensus 314 ~DAl~~~k~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~~-~~~e~~gi~~~a~AL~ 391 (459)
|||||++|+++++| +|||||++| ++++ .+|++|+.. +|++|+|+++|++||+
T Consensus 387 ~Dal~v~r~~v~~~~iVpGGGa~E-----------------------~~ls---~~L~~~~~~~~g~eq~~i~~fa~ALe 440 (529)
T 3iyg_A 387 HDALCVVKRVLESKSVVPGGGAVE-----------------------AALS---IYLENYATSMGSREQLAIAEFARSLL 440 (529)
T ss_pred HHHHHHHHHHhhCCeEEeCCcHHH-----------------------HHHH---HHHHHHhhhcCChHHHHHHHHHHHHH
Confidence 99999999999998 999999999 9999 999999854 8999999999999999
Q ss_pred hHHHHHHHhcCCChHHHHHHHHhc---CC--------CCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 392 MPVCTIASATGVDGSAVAEKLLEQ---DN--------PDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 392 ~ip~~La~NaG~d~~~vl~kl~~~---~~--------~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
.||++||+|||+|+.+++.+|++. ++ .++|||+.+|++.||++.|||||+.||+++|++|+++|+++
T Consensus 441 ~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~i 518 (529)
T 3iyg_A 441 VIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITI 518 (529)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhccccccccccCceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999875 22 57999999999999999999999999999999999999986
No 7
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1.3e-76 Score=633.29 Aligned_cols=366 Identities=13% Similarity=0.172 Sum_probs=328.1
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
+.||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++.+|+||+.|++
T Consensus 47 ~iTnDG~tIlk~i~~~hP-------------~Akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~ 113 (515)
T 3iyg_E 47 TVTNDGATILSMMDVDHQ-------------IAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIAD 113 (515)
T ss_pred EEeCcHHHHHHHcccCCH-------------HHHHHHHHHHHhhhhhCCchhHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 589999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh--------------heeccCC------CchhHHHHHHHHHHHhccC-------ccEEEE--c
Q 040169 85 EIYMAFEAIKGHLKCRAR--------------VGRTAAN------EDKRIDVLLTEVMEKVGKE-------GLFIIY--D 135 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~--------------vA~~ss~------~d~~la~li~~av~~vg~~-------g~I~i~--~ 135 (459)
||++|.+.++++|+++++ +|++|.+ +.+.|+++++||+.++... +.|.++ +
T Consensus 114 G~~~A~~~a~~~L~~~s~~v~~~~~~~~~l~~vA~tsl~sK~i~~~~~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~ 193 (515)
T 3iyg_E 114 GYEQAARIAIEHLDKISDSVLVDMKNTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVLTVADMQRRDVDFELIKVEGKV 193 (515)
T ss_pred HHHHHHHHHHHHHHHhceecCCCccCHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHhhcccccCCCCcccEEEEEec
Confidence 999999999999998763 5666643 3578999999999988541 235554 6
Q ss_pred CCCccceeEEEEeEEEeccccccccccc-ccccc----------------------------------------------
Q 040169 136 EEKKKNELKFLRGMKLNWGAVSSFFIDD-ETQTC---------------------------------------------- 168 (459)
Q Consensus 136 g~~~~d~~~~v~G~~~~~g~~~~~~~~~-~~~~~---------------------------------------------- 168 (459)
|+++. ++++++||+|+++|.||+|+++ ++.++
T Consensus 194 Ggs~~-ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~ 272 (515)
T 3iyg_E 194 GGRLE-DTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDFKALQKYEKEKFEEMIRQIKE 272 (515)
T ss_pred CCCcc-cceEEeeEEEecccccccccccCCCceEEEEcCccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88875 6899999999999999999987 65322
Q ss_pred -CCCEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccceeeeEEEE
Q 040169 169 -KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGSCKEVVI 247 (459)
Q Consensus 169 -~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~a~~v~i 247 (459)
+.||+|++++|+++++++|+.|++ .+++.+ ++.+|+|||++|||+++++.+. +++++||+|+.|++
T Consensus 273 ~g~~vvi~~~~I~~~al~~L~~~~I------~~v~~v-----~k~~le~ia~~tGa~ii~~l~~--l~~~~LG~a~~v~~ 339 (515)
T 3iyg_E 273 TGANLAVCQWGFDDEANHLLLQNDL------PAVRWV-----GGPEIELIAIATGGRIVPRFSE--LTAEKLGFAGLVKE 339 (515)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHCCC------EEEecc-----CHHHHHHHHHHhCCEEeccccc--CCHHHCCcceEEEE
Confidence 789999999999999999998876 356554 3668999999999999998663 56789999999986
Q ss_pred -----ecceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHH
Q 040169 248 -----LDNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNAL 317 (459)
Q Consensus 248 -----~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl 317 (459)
++++++|+++|++++ .+||++||+|+ ++|+++|||
T Consensus 340 ~~ig~~k~~~~~~~g~~~~~-----------------------------------~~tI~lrG~te~~l~E~kr~i~DAl 384 (515)
T 3iyg_E 340 ISFGTTKDKMLVIEQCKNSR-----------------------------------AVTIFIRGGNKMIIEEAKRSLHDAL 384 (515)
T ss_pred EEeccccceEEEEEcCCCCc-----------------------------------eEEEEEeCCcHHHHHHHHHHHHHHH
Confidence 458999999987754 67899999998 999999999
Q ss_pred HHHHHHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhcC-CchhHHHHHHHHHHHhhHHH
Q 040169 318 NAVKAAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQTT-SLGGKIGVQLLQQALKMPVC 395 (459)
Q Consensus 318 ~~~k~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~~-~~~e~~gi~~~a~AL~~ip~ 395 (459)
|++|+++++| +|||||++| ++++ ..|++|+.. +|++|+|+++|++||+.||+
T Consensus 385 ~~~r~a~~~~~iVpGGGa~e-----------------------~~~~---~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~ 438 (515)
T 3iyg_E 385 CVIRNLIRDNRVVYGGGAAE-----------------------ISCA---LAVSQEADKCPTLEQYAMRAFADALEVIPM 438 (515)
T ss_pred HHHHHHHhcCCcCCCCcHHH-----------------------HHHH---HHHHHHhccCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999 9999 999999754 89999999999999999999
Q ss_pred HHHHhcCCChHHHHHHHHhc----CCCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 396 TIASATGVDGSAVAEKLLEQ----DNPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 396 ~La~NaG~d~~~vl~kl~~~----~~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
+||+|||+|+.+++.+|++. +++++|||+.+|+|.||++.|||||++||+++|++|+++|+++
T Consensus 439 ~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~i 505 (515)
T 3iyg_E 439 ALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDMKHQHVIETLIGKKQQISLATQMVRMI 505 (515)
T ss_pred HHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999874 3568999999999999999999999999999999999999975
No 8
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=5.2e-77 Score=640.39 Aligned_cols=366 Identities=16% Similarity=0.205 Sum_probs=330.8
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 67 ~iTnDG~tIlk~i~v~hP-------------~Akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~ 133 (553)
T 3ko1_A 67 TITNDGATILDKMDLQHP-------------AAKLLVQIAKGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIIS 133 (553)
T ss_dssp EEECCHHHHHHSSCCCSH-------------HHHHHHHHHHTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred EEecCccchhhhhhccCh-------------hHHHHHHHhhCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEeh
Confidence 579999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh------------heeccCC------CchhHHHHHHHHHHHhccC--cc-------EEEE--c
Q 040169 85 EIYMAFEAIKGHLKCRAR------------VGRTAAN------EDKRIDVLLTEVMEKVGKE--GL-------FIIY--D 135 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~------------vA~~ss~------~d~~la~li~~av~~vg~~--g~-------I~i~--~ 135 (459)
||++|.+.++++|+++++ +|++|.+ ++++|+++++||+.+++.+ |. |.++ +
T Consensus 134 G~~~A~~~a~~~L~~~s~~v~~~d~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~ 213 (553)
T 3ko1_A 134 GYKKAEEVALQTIQELAQTVSINDTDLLRKIAMTSLSSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKA 213 (553)
T ss_dssp HHHHHHHHHHHHHHTTCEECCTTCHHHHHHHHHHHHTTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECC
T ss_pred hhhHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHh
Confidence 999999999999998875 6666533 4799999999999999875 54 7776 5
Q ss_pred CCCccceeEEEEeEEEeccccccccccc-ccccc----------------------------------------------
Q 040169 136 EEKKKNELKFLRGMKLNWGAVSSFFIDD-ETQTC---------------------------------------------- 168 (459)
Q Consensus 136 g~~~~d~~~~v~G~~~~~g~~~~~~~~~-~~~~~---------------------------------------------- 168 (459)
|++. +++++++||+|+++|.||+|+.. ++.++
T Consensus 214 Gg~~-~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~ 292 (553)
T 3ko1_A 214 GGSI-NDTQLVYGIVVDKEVVHPGMPKRLENAKIALIDASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILA 292 (553)
T ss_dssp CSCG-GGCEEESEEEECSCBSCTTSCSCCBSCEEEEECSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcc-ccceeeEEEEecccccCCCCccccccceEEEecCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7776 57899999999999999999766 55443
Q ss_pred -CCCEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccceeeeEEEE
Q 040169 169 -KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGSCKEVVI 247 (459)
Q Consensus 169 -~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~a~~v~i 247 (459)
+.||+|++++|+++++++|..+. +++|+. .++.+|+|||++|||+++++... +++++||+|+.|++
T Consensus 293 ~g~~vvI~~~~I~~~al~~L~~~g------I~~v~~-----v~k~~leria~~tGa~ivs~l~~--l~~~~LG~a~~v~~ 359 (553)
T 3ko1_A 293 TGANVIICQKGIDEVAQSYLAKKG------VLAVRR-----AKKSDLEKLARATGGRVVSNIDE--ISEQDLGYASLIEE 359 (553)
T ss_dssp TCCSEEECSSCBCSHHHHHHHHHT------CEEECC-----CCHHHHHHHHTTTTCCEESCGGG--CCSSSSEECSEEEC
T ss_pred hcceEEEeccChHHHHHHHHHhcc------hhhhhh-----hhhhhHHHHHHhhCCeeeccccc--CChhhcchHHHHHH
Confidence 78899999999999999887543 456653 46788999999999999998763 56889999999986
Q ss_pred e---cceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHHHH
Q 040169 248 L---DNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNALNA 319 (459)
Q Consensus 248 ~---~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl~~ 319 (459)
. +++|+|+++|++++ .++|++||+|+ ++|++|||||+
T Consensus 360 ~~ig~d~~~~i~g~~~~~-----------------------------------~~TI~lrG~te~~l~E~er~l~DAl~~ 404 (553)
T 3ko1_A 360 RKVGEDKMVFVEGAKNPK-----------------------------------SISILIRGGLERLVDETERALRDALGT 404 (553)
T ss_dssp CCCSSSCCEEEESCSSSS-----------------------------------CEEEEECCSSTTHHHHHHHHHHHHHHH
T ss_pred hhcCcceEEEeccCCCCc-----------------------------------eEEEeeeccHHHHHHHHHHHHHHHHHH
Confidence 4 88999999998754 67899999998 99999999999
Q ss_pred HHHHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHhhHHHHH
Q 040169 320 VKAAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALKMPVCTI 397 (459)
Q Consensus 320 ~k~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~ip~~L 397 (459)
+|+++++| +|||||++| ++++ ..|++|+. .+|++|+|+++|++||+.||++|
T Consensus 405 ~r~av~~g~iVpGGGa~e-----------------------~~~s---~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~L 458 (553)
T 3ko1_A 405 VADVIKDGRAIAGGGAVE-----------------------IEIA---KKLRKYAPQVGGKEQLAVEAYANALESLVSIL 458 (553)
T ss_dssp HHHHHHHCEEEETTTHHH-----------------------HHHH---HHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCceecCCceeE-----------------------eHHH---HHHHHhccccCChhHhHHHHHHHHHHhHHHHH
Confidence 99999999 999999999 9999 99999975 48999999999999999999999
Q ss_pred HHhcCCChHHHHHHHHhcC---C-CCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 398 ASATGVDGSAVAEKLLEQD---N-PDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 398 a~NaG~d~~~vl~kl~~~~---~-~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
|+|||+|+.+++.+|++.+ + .++|||+.+|+|.||++.|||||++||+++|++|+++|+++
T Consensus 459 a~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~i 523 (553)
T 3ko1_A 459 IENAGFDPIDLLMKLRSTHENENNKWYGIDLYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLV 523 (553)
T ss_dssp HHHHTSCHHHHHHHHHHTTCSGGGTTEEEETTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCHHHHHHHHHHHhhCcCCceEeEEeecCCchHHHHhCccchhhhhhhhhhhcchhheEE
Confidence 9999999999999999753 3 68999999999999999999999999999999999999975
No 9
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=6.3e-77 Score=639.05 Aligned_cols=366 Identities=15% Similarity=0.199 Sum_probs=330.6
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 56 ~iTnDG~tIlk~i~v~hP-------------~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~ 122 (543)
T 3ruv_A 56 VVTNDGVTILREMSVEHP-------------AAKMLIEVAKTQEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVK 122 (543)
T ss_dssp EEECCHHHHHHHSCCCCH-------------HHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EEECCHHHHHHHccCcCH-------------HHHHHHHHHHHHHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHH
Confidence 579999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh------------heeccC------CCchhHHHHHHHHHHHhccC-cc-----EEEE--cCCC
Q 040169 85 EIYMAFEAIKGHLKCRAR------------VGRTAA------NEDKRIDVLLTEVMEKVGKE-GL-----FIIY--DEEK 138 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~------------vA~~ss------~~d~~la~li~~av~~vg~~-g~-----I~i~--~g~~ 138 (459)
||++|.+.++++|+++++ +|++|. .++++|++++++|+.+++.+ |. |.++ .|++
T Consensus 123 G~~~A~~~a~~~L~~~s~~v~~~d~~~L~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~g~~dl~~I~V~k~~Gg~ 202 (543)
T 3ruv_A 123 GYQAAAQKAQELLKTIACEVGAQDKEILTKIAMTSITGKGAEKAKEKLAEIIVEAVSAVVDDEGKVDKDLIKIEKKSGAS 202 (543)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHHHHTCGGGCCHHHHHHHHHHHHHHCCTTSCCCGGGEEEEEEECSC
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHhhccCCCcccceEEEEEcCCCC
Confidence 999999999999999875 666653 24789999999999999876 64 7776 6777
Q ss_pred ccceeEEEEeEEEeccccccccccc-ccccc-----------------------------------------------CC
Q 040169 139 KKNELKFLRGMKLNWGAVSSFFIDD-ETQTC-----------------------------------------------KQ 170 (459)
Q Consensus 139 ~~d~~~~v~G~~~~~g~~~~~~~~~-~~~~~-----------------------------------------------~~ 170 (459)
. +++++++|++|+++|.||+|+.. ++.++ +.
T Consensus 203 ~-~ds~lv~G~v~dk~~~~~~m~~~~~n~kIll~~~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~ 281 (543)
T 3ruv_A 203 I-DDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCAIEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGA 281 (543)
T ss_dssp G-GGCEEESSEEESCCCSCTTSCSEEEEEEEEEESSCBSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred c-ccceeecceEEeccccCccccccccCcEEEEEcccccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 7 57899999999999999999765 55433 78
Q ss_pred CEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccceeeeEEEEe--
Q 040169 171 PLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGSCKEVVIL-- 248 (459)
Q Consensus 171 ~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~a~~v~i~-- 248 (459)
||+|++++|+++++++|..+ ++++|+. .++.+|+|||++|||+++++.+. +++++||+|+.|++.
T Consensus 282 ~vvi~~~~I~~~al~~L~~~------gI~~v~~-----v~k~~le~ia~~tGa~iis~l~~--l~~~~LG~a~~v~~~~i 348 (543)
T 3ruv_A 282 NVLFCQKGIDDLAQHYLAKE------GIVAARR-----VKKSDMEKLAKATGANVIAAIAA--LSAQDLGDAGLVEERKI 348 (543)
T ss_dssp SEEEESSCBCHHHHHHHHHT------TCEEECS-----CCHHHHHHHHHHHCCCEESCGGG--CCGGGCEEEEEEEEEEE
T ss_pred CEEEEeCCccHHHHHHHHHc------CcEEEee-----CCHHHHHHHHHHhCCceeccccc--CCHHHCCcccEEEEEEe
Confidence 89999999999999988743 3456653 46789999999999999998663 568899999999864
Q ss_pred -cceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHHHHHHH
Q 040169 249 -DNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNALNAVKA 322 (459)
Q Consensus 249 -~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl~~~k~ 322 (459)
+++++|+++|++++ .++|++||+|+ ++|++|||||++|+
T Consensus 349 g~~~~~~i~g~~~~~-----------------------------------~~TI~lrG~te~~l~E~kr~l~DAl~~~r~ 393 (543)
T 3ruv_A 349 SGDSMIFVEECKHPK-----------------------------------AVTMLIRGTTEHVIEEVARAVDDAVGVVGC 393 (543)
T ss_dssp TTEEEEEEECCSSCS-----------------------------------SEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEECCCCCc-----------------------------------eeEEEecCCCHHHHHHHHHHHHHHHHHHHH
Confidence 88999999988754 57899999997 99999999999999
Q ss_pred HHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHhhHHHHHHHh
Q 040169 323 AMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALKMPVCTIASA 400 (459)
Q Consensus 323 a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~ip~~La~N 400 (459)
++++| +|||||++| ++++ ..|++|+. .++++|+|+++|++||+.||++||+|
T Consensus 394 av~~g~iVpGGGa~e-----------------------~~~s---~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~N 447 (543)
T 3ruv_A 394 TIEDGRIVSGGGSTE-----------------------VELS---MKLREYAEGISGREQLAVRAFADALEVIPRTLAEN 447 (543)
T ss_dssp HHHHCEEEETTTHHH-----------------------HHHH---HHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHH
T ss_pred HHhcCCeecCCcHHH-----------------------HHHH---HHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999 999999999 9999 99999985 48999999999999999999999999
Q ss_pred cCCChHHHHHHHHhc----CCCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 401 TGVDGSAVAEKLLEQ----DNPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 401 aG~d~~~vl~kl~~~----~~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
||+|+.+++.+|++. +++++|||+.+|+|.||++.|||||++||+++|++|+++|+++
T Consensus 448 aG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~i 509 (543)
T 3ruv_A 448 AGLDAIEILVKVRAAHASNGNKCAGLNVFTGAVEDMCENGVVEPLRVKTQAIQSAAESTEML 509 (543)
T ss_dssp TTCCHHHHHHHHHHHHTTTCCTTEEECTTTCSEEETTTTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHhhcCCceeeeeCCCCccccHHHcCCEecHHHHHHHHHHHHHHHHHH
Confidence 999999999999874 3578999999999999999999999999999999999999975
No 10
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=3.6e-77 Score=635.45 Aligned_cols=366 Identities=14% Similarity=0.212 Sum_probs=301.3
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +||||+++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 10 ~iTnDG~tIlk~i~v~hP-------------~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~ 76 (500)
T 3aq1_B 10 VITNDGATILKEMDIQHP-------------AAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISE 76 (500)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EEECcHHHHHHhCcCCCH-------------HHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 689999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh------------heecc------CCCchhHHHHHHHHHHHhccC--cc--------EEEE--
Q 040169 85 EIYMAFEAIKGHLKCRAR------------VGRTA------ANEDKRIDVLLTEVMEKVGKE--GL--------FIIY-- 134 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~------------vA~~s------s~~d~~la~li~~av~~vg~~--g~--------I~i~-- 134 (459)
||++|.+.++++|+++++ +|++| +++++.|++++++|+.+++.+ |. |.++
T Consensus 77 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 77 GYRHAAEKCREILETITIAISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 999999999999999875 55543 557899999999999999765 32 5666
Q ss_pred cCCCccceeEEEEeEEEeccccccccccc-ccccc---------------------------------------------
Q 040169 135 DEEKKKNELKFLRGMKLNWGAVSSFFIDD-ETQTC--------------------------------------------- 168 (459)
Q Consensus 135 ~g~~~~d~~~~v~G~~~~~g~~~~~~~~~-~~~~~--------------------------------------------- 168 (459)
+|+++ +++++++|++|+++|.||+|+.. ++.++
T Consensus 157 ~G~~~-~ds~lv~G~v~dk~~~~~~m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~ 235 (500)
T 3aq1_B 157 AGGSI-DDSELIDGLVIDKERSHPNMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVI 235 (500)
T ss_dssp ESSCG-GGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHH
T ss_pred cCCCc-cceEEEeeeEEeecCCCCCCcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888 47899999999999999999766 65443
Q ss_pred --CCCEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccceeeeEEE
Q 040169 169 --KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGSCKEVV 246 (459)
Q Consensus 169 --~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~a~~v~ 246 (459)
+.||+|++++|+++++++|+.|+ |++|+ +.|+.+|+|||++|||+++++.. ++++++||+|+.|+
T Consensus 236 ~~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis~l~--~~~~~~LG~a~~v~ 302 (500)
T 3aq1_B 236 ASGANVVFCQKGIDDMAQYYIEKAG------IYAVR-----RVKKSDLKRLSKVTGATIIQDLD--QITTEDVGTAGLVE 302 (500)
T ss_dssp TTCCSEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSCTT--CCCSTTCEEEEEEE
T ss_pred HhCcCEEEECCCcCHHHHHHHHHCC------EEEEE-----eCCHHHHHHHHHHhCCeEecccc--cCCHhHCCCceEEE
Confidence 78999999999999999999875 46774 56788999999999999999866 35688999999998
Q ss_pred Ee---cceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHHH
Q 040169 247 IL---DNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNALN 318 (459)
Q Consensus 247 i~---~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl~ 318 (459)
+. +++|+|+++|+++ +.+||++||+|+ ++|++|||||
T Consensus 303 ~~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~t~~~l~E~er~l~Dal~ 347 (500)
T 3aq1_B 303 EKEVRGGKMTYVTGCQNS-----------------------------------KAVTVLLHGGTEHVVDSLDHALNDALH 347 (500)
T ss_dssp EEECSSSEEEEEEEETTC-----------------------------------CCEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred EEEecCeEEEEEECCCCC-----------------------------------ceEEEEecCCcHHHHHHHHHHHHHHHH
Confidence 64 8999999998663 489999999998 9999999999
Q ss_pred HHHHHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHhhHHHH
Q 040169 319 AVKAAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALKMPVCT 396 (459)
Q Consensus 319 ~~k~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~ip~~ 396 (459)
++|+++++| +|||||++| ++++ ..|++++. .++++|+|+++|++||+.||++
T Consensus 348 ~~r~~~~~~~iVpGGGa~e-----------------------~~~~---~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~ 401 (500)
T 3aq1_B 348 VVGVVIEDGKVVVGGGSSE-----------------------VELS---LRLSEYASTLKGREQLAVSKFAEALEVIPVA 401 (500)
T ss_dssp HHHHHHHHSEEEETTTHHH-----------------------HHHH---HHHHHHHHTCCSHHHHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHCCCCCCCCcHHH-----------------------HHHH---HHHHHHhhhcCchHHHHHHHHHHHHHHHHHH
Confidence 999999999 999999999 9999 99999985 4899999999999999999999
Q ss_pred HHHhcCCChHHHHHHHHhc---CCCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 397 IASATGVDGSAVAEKLLEQ---DNPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 397 La~NaG~d~~~vl~kl~~~---~~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
||+|||+|+.+++.+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|+++
T Consensus 402 La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~i 466 (500)
T 3aq1_B 402 LAENAGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMI 466 (500)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999964 4568999999999999999999999999999999999999975
No 11
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=1.7e-77 Score=645.18 Aligned_cols=368 Identities=16% Similarity=0.234 Sum_probs=332.1
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 61 ~iTnDG~tIlk~i~v~hP-------------~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~ 127 (559)
T 3p9d_A 61 TVTNDGATILSLLDVQHP-------------AGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIIT 127 (559)
T ss_dssp CEECCHHHHHHHHCCCSH-------------HHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EEECCHHHHHHHhcCCCH-------------HHHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 689999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-hhh------------heeccCC------CchhHHHHHHHHHHHhcc-----Ccc-----EEEE-
Q 040169 85 EIYMAFEAIKGHLKC-RAR------------VGRTAAN------EDKRIDVLLTEVMEKVGK-----EGL-----FIIY- 134 (459)
Q Consensus 85 G~~~a~~~~l~~L~~-~s~------------vA~~ss~------~d~~la~li~~av~~vg~-----~g~-----I~i~- 134 (459)
||++|.+.++++|++ +++ +|++|.+ ++++|++++++|+.++++ ++. |.++
T Consensus 128 G~~~A~~~a~~~L~~~~s~~v~~~~~e~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k 207 (559)
T 3p9d_A 128 GFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLK 207 (559)
T ss_dssp HHHHHHHHHHHHHHHHTGGGSCC--CTTHHHHHHHTTSSSGGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEE
T ss_pred HHHHHHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHhccCcccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEE
Confidence 999999999999999 765 6666644 489999999999999983 243 3333
Q ss_pred -cCCCccceeEEEEeEEEeccccccccccc-c--cccc------------------------------------------
Q 040169 135 -DEEKKKNELKFLRGMKLNWGAVSSFFIDD-E--TQTC------------------------------------------ 168 (459)
Q Consensus 135 -~g~~~~d~~~~v~G~~~~~g~~~~~~~~~-~--~~~~------------------------------------------ 168 (459)
+|+++. ++++++||+|+++|.||+|+.. + +.++
T Consensus 208 ~~Ggs~~-ds~lv~G~v~dk~~~~~~m~~~ie~~n~kIll~~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le 286 (559)
T 3p9d_A 208 AHGKSAT-ESLLVPGYALNCTVASQAMPKRIAGGNVKIACLDLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVK 286 (559)
T ss_dssp EESSCSS-CCBCCSEECCCCCCSSTTSCSEECSSSBCEEEETTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred ecCCCcc-ceeEeccEEEeecccCCCcceeeccCCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 488886 5899999999999999999887 7 6544
Q ss_pred -----CCCEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeecccc----ccccccc
Q 040169 169 -----KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNS----LLARLKL 239 (459)
Q Consensus 169 -----~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~----~l~~~~L 239 (459)
+.||+|++++|+++++++|+.|++ ++|+ +.|+.+|+|||++|||+++++..++ ++++++|
T Consensus 287 ~I~~~g~~lvI~~~~I~~~al~~L~~~~I------~av~-----~~~k~~le~ia~~TGa~iis~~~~l~~~e~~~~~~L 355 (559)
T 3p9d_A 287 KIIDAGAQVVLTTKGIDDLCLKEFVEAKI------MGVR-----RCKKEDLRRIARATGATLVSSMSNLEGEETFESSYL 355 (559)
T ss_dssp HHHTTCCSEEEESSCCCGGGTHHHHHTTC------EEES-----SCCHHHHHHHHHHSSCCCBCCSCCSTTCCCCCTTTS
T ss_pred HHHhhCCCEEEEcCCCCHHHHHHHHHcCC------ceEc-----cCCHHHHHHHHHHhCCEEEeccccccccccCCHhHC
Confidence 789999999999999999998874 5664 5578899999999999999987422 3558899
Q ss_pred eeeeEEE---EecceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chh
Q 040169 240 GSCKEVV---ILDNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNK 311 (459)
Q Consensus 240 G~a~~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r 311 (459)
|+|+.|+ +++++|+|+.||++ ++++||++||+|+ ++|
T Consensus 356 G~a~~v~~~~ig~~~~~~~~g~~~-----------------------------------~~~~tI~lrG~te~~l~E~kr 400 (559)
T 3p9d_A 356 GLCDEVVQAKFSDDECILIKGTSK-----------------------------------HSSSSIILRGANDYSLDEMER 400 (559)
T ss_dssp CCEEEEEEEECSSCEEECEEEESS-----------------------------------SCCCCEEEEESCHHHHHHHHH
T ss_pred ccceEEEEEEEcCceEEEEEcCCC-----------------------------------CCEEEEEEcCCCHHHHHHHHH
Confidence 9999998 68999999999866 3578999999998 999
Q ss_pred hhhHHHHHHHHHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHH
Q 040169 312 RIVNALNAVKAAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQA 389 (459)
Q Consensus 312 ~i~DAl~~~k~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~A 389 (459)
+++||||++|+++++| +|||||++| ++++ .+|++|+. .+|++|+|+++|++|
T Consensus 401 ~l~DAL~~~r~av~~g~iVpGGGa~e-----------------------~~~s---~~L~~~~~~~~g~eq~~i~~~a~A 454 (559)
T 3p9d_A 401 SLHDSLSVVKRTLESGNVVPGGGCVE-----------------------AALN---IYLDNFATTVGSREQLAIAEFAAA 454 (559)
T ss_dssp HHHHHHHHHHHHHTSSCEECTTTTHH-----------------------HHHH---HHHHHHHTTSCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCCEEeCccHHH-----------------------HHHH---HHHHHHhcccChHHHHHHHHHHHH
Confidence 9999999999999999 999999999 9999 99999975 489999999999999
Q ss_pred HhhHHHHHHHhcCCChHHHHHHHHhc---CCC------------CeeEecCCCccccccccCcccchHHHHHHHHHHHHH
Q 040169 390 LKMPVCTIASATGVDGSAVAEKLLEQ---DNP------------DVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRL 454 (459)
Q Consensus 390 L~~ip~~La~NaG~d~~~vl~kl~~~---~~~------------~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~ 454 (459)
|+.||++||+|||+|+.+++.+|++. ++. ++|||+.+|+|.||++.|||||++||+++|++|+++
T Consensus 455 Le~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~ 534 (559)
T 3p9d_A 455 LLIIPKTLAVNAAKDSSELVAKLRSYHAASQMAKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEA 534 (559)
T ss_dssp HHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSCCC----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHHHHHhccccccccccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHH
Confidence 99999999999999999999999875 333 799999999999999999999999999999999999
Q ss_pred Hhhc
Q 040169 455 LVQT 458 (459)
Q Consensus 455 a~~~ 458 (459)
|+++
T Consensus 535 a~~i 538 (559)
T 3p9d_A 535 CVAI 538 (559)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9975
No 12
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=3.4e-76 Score=629.75 Aligned_cols=365 Identities=15% Similarity=0.162 Sum_probs=327.8
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 49 ~iTnDG~tIlk~i~v~hp-------------~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~ 115 (513)
T 3iyg_B 49 MVTNDGATILKNIGVDNP-------------AAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIA 115 (513)
T ss_pred EEECCHHHHHHHccccCH-------------HHHHHHHHHHHhhhhhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 589999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh---------------heec--cC----CCchhHHHHHHHHHHHhccC---ccEEEE--cCCC
Q 040169 85 EIYMAFEAIKGHLKCRAR---------------VGRT--AA----NEDKRIDVLLTEVMEKVGKE---GLFIIY--DEEK 138 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~---------------vA~~--ss----~~d~~la~li~~av~~vg~~---g~I~i~--~g~~ 138 (459)
||++|.+.++++|+++++ +|++ ++ ++++.|++++++|+.+++.+ +.|.++ .|++
T Consensus 116 G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~va~tslssK~~~~~~~~i~~livdAv~~V~~~~d~~~I~V~ki~gg~ 195 (513)
T 3iyg_B 116 GWREATKAARQALLNSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVEAVLRLKGSGNLEAIHVIKKLGGS 195 (513)
T ss_pred HHHHHHHHHHHHHHHhCcCcccccccCHHHHHHHHHhhhcccccccchHHHHHHHHHHHHHhcccCCcCeEEEEEeCCCC
Confidence 999999999999998763 5543 33 36789999999999999987 777776 4777
Q ss_pred ccceeEEEEeEEEeccccccccccc-ccccc------------------------------------------------C
Q 040169 139 KKNELKFLRGMKLNWGAVSSFFIDD-ETQTC------------------------------------------------K 169 (459)
Q Consensus 139 ~~d~~~~v~G~~~~~g~~~~~~~~~-~~~~~------------------------------------------------~ 169 (459)
.. ++++++||+|+++|.+| |+.. ++.++ +
T Consensus 196 ~~-ds~lv~G~v~dk~~~~~-m~~~~en~kIll~~~~Le~~k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g 273 (513)
T 3iyg_B 196 LA-DSYLDEGFLLDKKIGVN-QPKRIENAKILIANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHG 273 (513)
T ss_pred cc-ceeEEeeEEEeccccCC-CceeecCceEEEEcCCcccccccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 64 68999999999999887 5432 22111 7
Q ss_pred CCEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccceeeeEEE---
Q 040169 170 QPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGSCKEVV--- 246 (459)
Q Consensus 170 ~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~a~~v~--- 246 (459)
.||+|++++|+++++++|.. .+|++||+|++. +|+|||++|||+++++... +++++||+|+.|+
T Consensus 274 ~~vvi~~~~I~~~al~~L~~------~~I~av~~~~~~-----~le~ia~~tGa~ii~~l~~--l~~~~LG~a~~v~~~~ 340 (513)
T 3iyg_B 274 INCFINRQLIYNYPEQLFGA------AGVMAIEHADFV-----GVERLALVTGGEIASTFDH--PELVKLGSCKLIEEVM 340 (513)
T ss_pred CCEEEEcCCccHHHHHHHHH------cCceEEecCCHH-----HHHHHHHHhCCEEeccccc--CCHhHCCcccEEEEEE
Confidence 89999999999999998875 467899999764 6999999999999998663 5688999999997
Q ss_pred EecceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHHHHHH
Q 040169 247 ILDNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNALNAVK 321 (459)
Q Consensus 247 i~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl~~~k 321 (459)
+++++++++.+|++ ++++||++||+|+ ++|++|||||++|
T Consensus 341 ig~~~~~~~~g~~~-----------------------------------~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r 385 (513)
T 3iyg_B 341 IGEDKLIHFSGVAL-----------------------------------GEACTIVLRGATQQILDEAERSLHDALCVLA 385 (513)
T ss_pred ECCeEEEEEecCCC-----------------------------------CceEEEEecCCCHHHHHHHHHHHHHHHHHHH
Confidence 78999999999865 3489999999998 9999999999999
Q ss_pred HHHhC-CcccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHhhHHHHHHH
Q 040169 322 AAMEG-GIIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALKMPVCTIAS 399 (459)
Q Consensus 322 ~a~~~-gvVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~ip~~La~ 399 (459)
+++++ ++|||||++| ++++ ..|++|+. .+|++|+|+++|++||+.||++||+
T Consensus 386 ~av~~~~iVpGGGa~e-----------------------~~~~---~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~ 439 (513)
T 3iyg_B 386 QTVKDSRTVYGGGCSE-----------------------MLMA---HAVTQLASRTPGKEAVAMESYAKALRMLPTIIAD 439 (513)
T ss_pred HHHhCCcEEeCCcHHH-----------------------HHHH---HHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 6999999999 9999 99999975 4899999999999999999999999
Q ss_pred hcCCChHHHHHHHHhc---CCCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 400 ATGVDGSAVAEKLLEQ---DNPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 400 NaG~d~~~vl~kl~~~---~~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
|||+|+.+++.+|++. ++.++|||+.+|+|.||++.|||||++||+++|++|+++|+++
T Consensus 440 NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~i 501 (513)
T 3iyg_B 440 NAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVI 501 (513)
T ss_pred hcCCCHHHHHHHHHHHHhcCCCceeecCCCCCccchHhccCEecHHHHHHHHHHHHHHHHHH
Confidence 9999999999999975 4668999999999999999999999999999999999999875
No 13
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=2.9e-76 Score=630.91 Aligned_cols=367 Identities=13% Similarity=0.148 Sum_probs=326.6
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
+.||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 48 ~iTnDG~tIlk~i~v~hP-------------~akll~~~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~ 114 (518)
T 3iyg_D 48 TITNDGATILKQMQVLHP-------------AARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISE 114 (518)
T ss_pred EEECCHHHHHHHcccchH-------------HHHHHHHHHHHhhhhhCCCceeHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 589999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh------------heeccCCC------chhHHHHHHHHHHHhcc---Ccc-----EEEE--cC
Q 040169 85 EIYMAFEAIKGHLKCRAR------------VGRTAANE------DKRIDVLLTEVMEKVGK---EGL-----FIIY--DE 136 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~------------vA~~ss~~------d~~la~li~~av~~vg~---~g~-----I~i~--~g 136 (459)
||++|.+.++++|+++++ +|++|.+. ++.|+++++||+.+++. ++. |.++ +|
T Consensus 115 G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~G 194 (518)
T 3iyg_D 115 SFQKALEKGIEILTDMSRPVELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLG 194 (518)
T ss_pred HHHHHHHHHHHHHHHheeeCCCCChHHHHHHhHhhhccccchhhHHHHHHHHHHHHHHhhccccCCCcccceEEEEEcCC
Confidence 999999999999999875 67777553 48899999999999985 443 6665 56
Q ss_pred CCccceeEEEEeEEEeccccc--cccccc-ccc-----------------cc---------------------------C
Q 040169 137 EKKKNELKFLRGMKLNWGAVS--SFFIDD-ETQ-----------------TC---------------------------K 169 (459)
Q Consensus 137 ~~~~d~~~~v~G~~~~~g~~~--~~~~~~-~~~-----------------~~---------------------------~ 169 (459)
++. +++++++||+|+++|.| |+++.+ +.. ++ +
T Consensus 195 g~~-~ds~lv~G~~~dk~~~~~mp~~i~n~kIlll~~~Le~~k~~~~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g 273 (518)
T 3iyg_D 195 GTI-DDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYVQMDRVLREERAYILNLVKQIKKTG 273 (518)
T ss_pred CCh-hhheEeccEEEecccccCCCccccCceEEEEEeeccccccccCceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 776 47899999999999998 554322 110 00 7
Q ss_pred CCEEEE-----eccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccceeeeE
Q 040169 170 QPLFII-----AEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGSCKE 244 (459)
Q Consensus 170 ~~l~ii-----~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~a~~ 244 (459)
.||+|+ +++|+++++++|+.| +|++||+|++. +|+|||++|||+++++.+. +++++||+|+.
T Consensus 274 ~~lvi~~k~i~~~~I~~~Al~~L~~~------~I~av~~~~~~-----~le~ia~~tGa~ii~~l~~--l~~~~LG~a~~ 340 (518)
T 3iyg_D 274 CNVLLIQKSILRDALSDLALHFLNKM------KIMVVKDIERE-----DIEFICKTIGTKPVAHVDQ--FTADMLGSAEL 340 (518)
T ss_pred CCEEEEeccccccCcCHHHHHHHHHc------CcEEEecCCHH-----HHHHHHHHhCCEEeccccc--CCHHHCCcCcE
Confidence 899999 799999999999876 46899998754 6999999999999998663 56889999999
Q ss_pred EEE---ec-ceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhH
Q 040169 245 VVI---LD-NEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVN 315 (459)
Q Consensus 245 v~i---~~-~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~D 315 (459)
|++ ++ +++++|++|+. +++++||++||+|+ ++|++||
T Consensus 341 v~~~~~g~~~~~~~~~g~~~----------------------------------~~~~~tI~lrG~te~~l~E~kr~l~D 386 (518)
T 3iyg_D 341 AEEVSLNGSGKLIKITGCAS----------------------------------PGKTVTIVVRGSNKLVIEEAERSIHD 386 (518)
T ss_pred EEEEEeCCCceEEEEECCCC----------------------------------CCceEEEEECCCCHHHHHHHHHHHHH
Confidence 975 45 68899998754 25689999999998 9999999
Q ss_pred HHHHHHHHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHhhH
Q 040169 316 ALNAVKAAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALKMP 393 (459)
Q Consensus 316 Al~~~k~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~i 393 (459)
|||++|+++++| +|||||++| ++++ ..|++|+. .+|++|+|+++|++||+.|
T Consensus 387 Al~~~r~av~~~~iVpGGGa~e-----------------------~~~~---~~L~~~~~~~~g~~q~~i~~~a~ALe~i 440 (518)
T 3iyg_D 387 ALCVIRCLVKKRALIAGGGAPE-----------------------IELA---LRLTEYSRTLSGMESYCIRAFADAMEVI 440 (518)
T ss_pred HHHHHHHHHhCCCEeecCcHHH-----------------------HHHH---HHHHHHhhcCChHHHHHHHHHHHHHHHH
Confidence 999999999998 999999999 9999 99999975 4899999999999999999
Q ss_pred HHHHHHhcCCChHHHHHHHHhc---CCCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 394 VCTIASATGVDGSAVAEKLLEQ---DNPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 394 p~~La~NaG~d~~~vl~kl~~~---~~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
|++||+|||+|+.+++.+|++. +++++|||+.+|+|.||++.|||||+.||+++|++|+++|+++
T Consensus 441 p~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~i 508 (518)
T 3iyg_D 441 PSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSI 508 (518)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcccchhhccCEEcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999884 4568999999999999999999999999999999999999975
No 14
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=2.5e-76 Score=634.63 Aligned_cols=366 Identities=15% Similarity=0.212 Sum_probs=334.0
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++.+|+||+.|++
T Consensus 58 ~iTnDG~tIlk~i~v~hP-------------~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~ 124 (543)
T 1a6d_B 58 VITNDGVTILKEMDVEHP-------------AAKMMVEVSKTQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISE 124 (543)
T ss_dssp EEECCHHHHHHHSCCCSH-------------HHHHHHHHHTCTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred EEeCCHHHHHHHhhccch-------------HHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 579999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh------------hee------ccCCCchhHHHHHHHHHHHhccC--c-------cEEEE--c
Q 040169 85 EIYMAFEAIKGHLKCRAR------------VGR------TAANEDKRIDVLLTEVMEKVGKE--G-------LFIIY--D 135 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~------------vA~------~ss~~d~~la~li~~av~~vg~~--g-------~I~i~--~ 135 (459)
||++|.+.++++|+++++ +|+ +++++++.|++++++|+.+++.+ | .|.++ +
T Consensus 125 G~~~A~~~a~~~L~~~a~~v~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~ 204 (543)
T 1a6d_B 125 GYRMASEEAKRVIDEISTKIGADEKALLLKMAQTSLNSKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQ 204 (543)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEec
Confidence 999999999999999875 555 34557899999999999999865 4 37777 8
Q ss_pred CCCccceeEEEEeEEEeccccccccccc-ccccc----------------------------------------------
Q 040169 136 EEKKKNELKFLRGMKLNWGAVSSFFIDD-ETQTC---------------------------------------------- 168 (459)
Q Consensus 136 g~~~~d~~~~v~G~~~~~g~~~~~~~~~-~~~~~---------------------------------------------- 168 (459)
|+++. ++++++|++|+++|.||+|+.. ++.++
T Consensus 205 G~~~~-ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~ 283 (543)
T 1a6d_B 205 GGAID-DTQLINGIIVDKEKVHPGMPDVVKDAKIALLDAPLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKS 283 (543)
T ss_dssp SSCGG-GCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcc-ceeEEccEEEecCCCCCCCcceecCCeEEEEecccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98886 6799999999999999999876 65444
Q ss_pred -CCCEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccceeeeEEEE
Q 040169 169 -KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGSCKEVVI 247 (459)
Q Consensus 169 -~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~a~~v~i 247 (459)
+.||+|++++|+++++++|+.|+ |++|+ +.++.+|+|||++|||+++++.+ ++.+++||+|+.|++
T Consensus 284 ~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~v~k~~le~ia~~tGa~iis~l~--~l~~~~LG~a~~v~~ 350 (543)
T 1a6d_B 284 VGANVVITQKGIDDMAQHYLSRAG------IYAVR-----RVKKSDMDKLAKATGASIVSTID--EISSSDLGTAERVEQ 350 (543)
T ss_dssp TTCCEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHTCCEESCGG--GCCGGGCEEEEEEEE
T ss_pred cCCCEEEECCCcCHHHHHHHHHCC------eeEec-----cCCHHHHHHHHHHhCCceecccc--cCCHHHCCCceEEEE
Confidence 78999999999999999999875 46775 55788999999999999999866 356889999999986
Q ss_pred ---ecceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHHHH
Q 040169 248 ---LDNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNALNA 319 (459)
Q Consensus 248 ---~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl~~ 319 (459)
++++++|+++|+++ +.+||++||+|+ ++|++|||||+
T Consensus 351 ~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~t~~~l~E~er~l~DAl~~ 395 (543)
T 1a6d_B 351 VKVGEDYMTFVTGCKNP-----------------------------------KAVSILVRGETEHVVDEMERSITDSLHV 395 (543)
T ss_dssp EEETTEEEEEEEEESSS-----------------------------------SCEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EEecCceEEEEecCCCC-----------------------------------ceEEEEecCCCHHHHHHHHHHHHHHHHH
Confidence 48899999998763 478999999998 99999999999
Q ss_pred HHHHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHhhHHHHH
Q 040169 320 VKAAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALKMPVCTI 397 (459)
Q Consensus 320 ~k~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~ip~~L 397 (459)
+|+++++| +|||||++| ++++ ..|++++. .++++|+|+++|++||+.||++|
T Consensus 396 ~r~a~~~~~ivpGGGa~e-----------------------~~~s---~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~L 449 (543)
T 1a6d_B 396 VASALEDGAYAAGGGATA-----------------------AEIA---FRLRSYAQKIGGRQQLAIEKFADAIEEIPRAL 449 (543)
T ss_dssp HHHHHHHCEEEETTTHHH-----------------------HHHH---HHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHCCCccCCccHHH-----------------------HHHH---HHHHHHhhhcCChHHHHHHHHHHHHHHHHHHH
Confidence 99999999 999999999 9999 99999975 58999999999999999999999
Q ss_pred HHhcCCChHHHHHHHHhc---CCCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 398 ASATGVDGSAVAEKLLEQ---DNPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 398 a~NaG~d~~~vl~kl~~~---~~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
|+|||+|+.+++.+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|+++
T Consensus 450 a~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~i 513 (543)
T 1a6d_B 450 AENAGLDPIDILLKLRAEHAKGNKTYGINVFTGEIEDMVKNGVIEPIRVGKQAIESATEAAIMI 513 (543)
T ss_dssp HHHHTCCHHHHHHHHHHHHHTTCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCChHHHHHHHHHHHhCCCCCeeEeCCCCcccchhhcCceecHHHHHHHHHHHHHHHHHH
Confidence 999999999999999964 4568999999999999999999999999999999999999975
No 15
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=1.7e-76 Score=636.29 Aligned_cols=366 Identities=18% Similarity=0.250 Sum_probs=334.4
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 60 ~iTnDG~tIlk~i~v~hP-------------~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~ 126 (548)
T 1q3q_A 60 VVTNDCATILDKIDLQHP-------------AAKMMVEVAKTQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITK 126 (548)
T ss_dssp EEESCHHHHHHHSCCCSH-------------HHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHH
T ss_pred EEECCHHHHHHHhhccch-------------HHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 589999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh------------heec------cCCCchhHHHHHHHHHHHhccC--c-------cEEEE--c
Q 040169 85 EIYMAFEAIKGHLKCRAR------------VGRT------AANEDKRIDVLLTEVMEKVGKE--G-------LFIIY--D 135 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~------------vA~~------ss~~d~~la~li~~av~~vg~~--g-------~I~i~--~ 135 (459)
||++|.+.++++|+++++ +|++ ++++++.|+++++||+.+++.+ | .|.++ +
T Consensus 127 G~~~A~~~a~~~L~~~s~~v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~ 206 (548)
T 1q3q_A 127 GYALAAEKAQEILDEIAIRVDPDDEETLLKIAATSITGKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKA 206 (548)
T ss_dssp HHHHHHHHHHHHHHHHCEECCTTCHHHHHHHHHHHSCSSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHhhccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEec
Confidence 999999999999999875 5553 3456899999999999999865 3 68877 8
Q ss_pred CCCccceeEEEEeEEEeccccccccccc-ccccc----------------------------------------------
Q 040169 136 EEKKKNELKFLRGMKLNWGAVSSFFIDD-ETQTC---------------------------------------------- 168 (459)
Q Consensus 136 g~~~~d~~~~v~G~~~~~g~~~~~~~~~-~~~~~---------------------------------------------- 168 (459)
|+++. ++++++|++|+++|.||+|+.. ++.++
T Consensus 207 G~~~~-ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~ 285 (548)
T 1q3q_A 207 GEGVE-ESELVRGVVIDKEVVHPRMPKRVENAKIALINEALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQ 285 (548)
T ss_dssp BSCGG-GCEEESSEEESCCCSSTTSCSEESSEEEEEECSCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcc-ceEEEeeEEEeccCCCCCCcceecCCEEEEEecCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88886 6799999999999999999876 66544
Q ss_pred -CCCEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccceeeeEEEE
Q 040169 169 -KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGSCKEVVI 247 (459)
Q Consensus 169 -~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~a~~v~i 247 (459)
+.||+|++++|+++++++|+.|+ |++|+ +.|+++|+|||++|||+++++.+ ++++++||+|+.|++
T Consensus 286 ~g~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~ii~~l~--~~~~~~LG~a~~v~~ 352 (548)
T 1q3q_A 286 TGANVVFVQKGIDDLAQHYLAKYG------IMAVR-----RVKKSDMEKLAKATGAKIVTNVK--DLTPEDLGYAEVVEE 352 (548)
T ss_dssp HTCCEEEESSCBCHHHHHHHHHTT------CEEEC-----SCCHHHHHHHHHHHCCCCBSSGG--GCCGGGCEEESEEEE
T ss_pred hCcCEEEEcCCcCHHHHHHHHHCC------cEEEc-----cCCHHHHHHHHHHhCCeEecccc--cCCHHHCCCceEEEE
Confidence 78999999999999999999875 46774 56788999999999999999866 356889999999986
Q ss_pred e---cceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHHHH
Q 040169 248 L---DNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNALNA 319 (459)
Q Consensus 248 ~---~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl~~ 319 (459)
. +++|+|+++|+++ +.+||++||+|+ ++|++|||||+
T Consensus 353 ~~ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~te~~l~E~er~l~DAl~~ 397 (548)
T 1q3q_A 353 RKLAGENMIFVEGCKNP-----------------------------------KAVTILIRGGTEHVIDEVERALEDAVKV 397 (548)
T ss_dssp EEETTEEEEEEECCSSC-----------------------------------SSEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EEecCceEEEEecCCCC-----------------------------------CeEEEEECCCChHHHHHHHHHHHHHHHH
Confidence 4 8899999998763 478999999998 99999999999
Q ss_pred HHHHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHhhHHHHH
Q 040169 320 VKAAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALKMPVCTI 397 (459)
Q Consensus 320 ~k~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~ip~~L 397 (459)
+|+++++| +|||||++| ++++ .+|++++. .++++|+++++|++||+.||++|
T Consensus 398 ~r~a~~~~~ivpGGGa~e-----------------------~~~~---~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~L 451 (548)
T 1q3q_A 398 VKDVMEDGAVLPAGGAPE-----------------------IELA---IRLDEYAKQVGGKEALAIENFADALKIIPKTL 451 (548)
T ss_dssp HHHHHHSCEEEECTTHHH-----------------------HHHH---HHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHCCCcccCCcHHH-----------------------HHHH---HHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999 999999999 9999 99999975 48999999999999999999999
Q ss_pred HHhcCCChHHHHHHHHhc---CCCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 398 ASATGVDGSAVAEKLLEQ---DNPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 398 a~NaG~d~~~vl~kl~~~---~~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
|+|||+|+.+++.+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|+++
T Consensus 452 a~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~i 515 (548)
T 1q3q_A 452 AENAGLDTVEMLVKVISEHKNRGLGIGIDVFEGKPADMLEKGIIEPLRVKKQAIKSASEAAIMI 515 (548)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHHHhhcCCCCcceeCCCCCccchhhcCCEecHHHHHHHHHHHHHHHHHH
Confidence 999999999999999964 3568999999999999999999999999999999999999975
No 16
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=5.9e-76 Score=627.92 Aligned_cols=366 Identities=11% Similarity=0.106 Sum_probs=323.4
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++.+|+||+.|++
T Consensus 48 ~iTnDG~tIlk~i~v~hP-------------~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~ 114 (515)
T 3iyg_H 48 TISNDGATILKLLDVVHP-------------AAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIR 114 (515)
T ss_pred EEECCHHHHHHHccCCCH-------------HHHHHHHHHHHhhceeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 589999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh----------------heecc------CCCchhHHHHHHHHHHHhccC---ccEEEE--cCC
Q 040169 85 EIYMAFEAIKGHLKCRAR----------------VGRTA------ANEDKRIDVLLTEVMEKVGKE---GLFIIY--DEE 137 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~----------------vA~~s------s~~d~~la~li~~av~~vg~~---g~I~i~--~g~ 137 (459)
||++|.+.++++|+++++ +|++| +.+++.|++++++|+.+++.+ +.|.++ +|+
T Consensus 115 G~~~A~~~a~~~L~~~a~~v~~~~~~~~~~~L~~va~tsl~sK~~s~~~~~i~~livdAv~~V~~~~d~~~I~V~k~~Gg 194 (515)
T 3iyg_H 115 AFRTATQLAVNKIKEIAVTVKKEDKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMMLDDLLQLKMIGIKKVQGG 194 (515)
T ss_pred HHHHHHHHHHHHHHHhhcccccCChHHHHHHHHHHHHHHhcCCcccccHHHHHHHHHHHHHHhcccCCcceEEEEecCCC
Confidence 999999999999998763 44443 236899999999999999866 677776 576
Q ss_pred CccceeEEEEeEEEeccccccccc---cc-ccccc---------------------------------------------
Q 040169 138 KKKNELKFLRGMKLNWGAVSSFFI---DD-ETQTC--------------------------------------------- 168 (459)
Q Consensus 138 ~~~d~~~~v~G~~~~~g~~~~~~~---~~-~~~~~--------------------------------------------- 168 (459)
+. .++++++||+|+++|.||+|. .. ++.++
T Consensus 195 ~~-~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~ 273 (515)
T 3iyg_H 195 AL-EESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIH 273 (515)
T ss_pred Cc-cceEEEeeeEEecCccCcccccCCccccccEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76 478999999999999999984 22 33322
Q ss_pred --CCCEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccceeeeEEE
Q 040169 169 --KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGSCKEVV 246 (459)
Q Consensus 169 --~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~a~~v~ 246 (459)
+.||+|++++|++.+++.|.. +|+ +++ ++.++.+|+|||++|||+++++... +++++||+|+.|+
T Consensus 274 ~~g~~vvi~~~~I~dla~~~l~~---~gI---~~v-----~~~~k~~leria~~tGa~ii~~l~~--~~~~~LG~a~~v~ 340 (515)
T 3iyg_H 274 HSGAKVVLSKLPIGDVATQYFAD---RDM---FCA-----GRVPEEDLKRTMMACGGSIQTSVNA--LSSDVLGRCQVFE 340 (515)
T ss_pred hcCCcEEEECCcccHHHHHHHHH---cCC---ccc-----ccccHHHHHHHHHHhCCEEeecccc--CCHHHCCcccEEE
Confidence 788999999999877765542 233 344 4567889999999999999998763 5688999999998
Q ss_pred Ee---cceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHHH
Q 040169 247 IL---DNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNALN 318 (459)
Q Consensus 247 i~---~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl~ 318 (459)
+. ++++++|++|++++ .+||++||+|+ ++|++|||||
T Consensus 341 ~~~ig~~~~~~i~g~~~~~-----------------------------------~~tI~lrG~t~~~l~E~kr~i~DAl~ 385 (515)
T 3iyg_H 341 ETQIGGERYNFFTGCPKAK-----------------------------------TCTIILRGGAEQFMEETERSLHDAIM 385 (515)
T ss_pred EEEEcCeEEEEEecCCCCc-----------------------------------eEEEEEeCCcHHHHHHHHHHHHHHHH
Confidence 54 78999999987643 68999999997 9999999999
Q ss_pred HHHHHHhC-CcccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHhhHHHH
Q 040169 319 AVKAAMEG-GIIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALKMPVCT 396 (459)
Q Consensus 319 ~~k~a~~~-gvVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~ip~~ 396 (459)
++|+++++ ++|||||++| ++++ ..|++|+. .+|++|+|+++|++||+.||++
T Consensus 386 ~~r~~v~~~~iVpGGGa~e-----------------------~~~s---~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~ 439 (515)
T 3iyg_H 386 IVRRAIKNDSVVAGGGAIE-----------------------MELS---KYLRDYSRTIPGKQQLLIGAYAKALEIIPRQ 439 (515)
T ss_pred HHHHHhhCCCeecCCcHHH-----------------------HHHH---HHHHHHHhcCChHHHHHHHHHHHHHHHHHHH
Confidence 99999998 6999999999 9999 99999975 4899999999999999999999
Q ss_pred HHHhcCCChHHHHHHHHhc---CCCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 397 IASATGVDGSAVAEKLLEQ---DNPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 397 La~NaG~d~~~vl~kl~~~---~~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
||+|||+|+.+++.+|++. ++.++|||+.+|+|.||++.|||||++||+++|++|+++|+++
T Consensus 440 La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~i 504 (515)
T 3iyg_H 440 LCDNAGFDATNILNKLRARHAQGGMWYGVDINTEDIADNFEAFVWEPAMVRINALTAASEAACLI 504 (515)
T ss_pred HHHhcCCCHHHHHHHHHHHhhccCCCeeEeCCCCcccccHhccCEECHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999975 3567999999999999999999999999999999999999975
No 17
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=5.3e-76 Score=632.12 Aligned_cols=366 Identities=16% Similarity=0.214 Sum_probs=334.1
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +||||+++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 59 ~iTnDG~tIlk~i~v~hP-------------~Akll~e~a~~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~ 125 (545)
T 1a6d_A 59 IISNDGATILKEMDVEHP-------------TAKMIVEVSKAQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISN 125 (545)
T ss_dssp EEECCHHHHHHHSCCCSH-------------HHHHHHGGGGCTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred EEeCcHHHHHHhhhccch-------------HHHHHHHHHHhcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 589999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh----------hee------ccCCCchhHHHHHHHHHHHhccC---------ccEEEE--cCC
Q 040169 85 EIYMAFEAIKGHLKCRAR----------VGR------TAANEDKRIDVLLTEVMEKVGKE---------GLFIIY--DEE 137 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~----------vA~------~ss~~d~~la~li~~av~~vg~~---------g~I~i~--~g~ 137 (459)
||++|.+.++++|+++++ +|+ +++++++.|+++++||+.+++++ +.|.++ +|+
T Consensus 126 G~~~A~~~a~~~L~~~s~~~~~~~~l~~va~tsl~sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~ 205 (545)
T 1a6d_A 126 GYRLAVNEARKIIDEIAEKSTDDATLRKIALTALSGKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGG 205 (545)
T ss_dssp HHHHHHHHHHHHHHHHCEECCCHHHHHHHHHHHTTTSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCS
T ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCC
Confidence 999999999999998762 565 33567899999999999999865 368887 888
Q ss_pred CccceeEEEEeEEEeccccccccccc-ccccc-----------------------------------------------C
Q 040169 138 KKKNELKFLRGMKLNWGAVSSFFIDD-ETQTC-----------------------------------------------K 169 (459)
Q Consensus 138 ~~~d~~~~v~G~~~~~g~~~~~~~~~-~~~~~-----------------------------------------------~ 169 (459)
++. ++++++|++|+++|.||+|+.. ++.++ +
T Consensus 206 ~~~-ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g 284 (545)
T 1a6d_A 206 SVN-DTQFISGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSG 284 (545)
T ss_dssp CST-TCEEESEEEESCCCSCTTSCSEEEEEEEEEECSCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred Cce-eeEEEeeEEEeccCCCCCCcceecCCEEEEEecCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 886 6799999999999999999876 65544 7
Q ss_pred CCEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccceeeeEEEEe-
Q 040169 170 QPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGSCKEVVIL- 248 (459)
Q Consensus 170 ~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~a~~v~i~- 248 (459)
.||+|++++|+++++++|+.|+ |++|+ +.|+.+|+|||++|||+++++.+ ++++++||+|+.|++.
T Consensus 285 ~~lvi~~~~I~~~al~~L~~~~------I~av~-----~~~k~~le~ia~~tGa~iis~l~--~~~~~~LG~a~~v~~~~ 351 (545)
T 1a6d_A 285 ANVVLCQKGIDDVAQHYLAKEG------IYAVR-----RVKKSDMEKLAKATGAKIVTDLD--DLTPSVLGEAETVEERK 351 (545)
T ss_dssp CCEEEESSCBCHHHHHHHHHHT------CEEEC-----SCCHHHHHHHHHHHCCCEESSGG--GCCGGGCEEEEEEEEEE
T ss_pred CCEEEECCCccHHHHHHHHHCC------eeEec-----cCCHHHHHHHHHHhCCeeecccc--cCCHHHCCCceEEEEEE
Confidence 8999999999999999999875 46774 56788999999999999999866 3568899999999864
Q ss_pred --cceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHHHHHH
Q 040169 249 --DNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNALNAVK 321 (459)
Q Consensus 249 --~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl~~~k 321 (459)
+++|+|+++|+++ +++||++||+|+ ++|++|||||++|
T Consensus 352 ig~~~~~~~~g~~~~-----------------------------------~~~TI~lrG~te~~l~E~kr~l~DAl~~~r 396 (545)
T 1a6d_A 352 IGDDRMTFVMGCKNP-----------------------------------KAVSILIRGGTDHVVSEVERALNDAIRVVA 396 (545)
T ss_dssp ETTEEEEEEEEESCS-----------------------------------SCEEEEECCSSSTTHHHHHHHHHHHHHHHH
T ss_pred ecCceEEEEecCCCC-----------------------------------ceEEEEEcCCCHHHHHHHHHHHHHHHHHHH
Confidence 7899999998763 489999999998 9999999999999
Q ss_pred HHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHhhHHHHHHH
Q 040169 322 AAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALKMPVCTIAS 399 (459)
Q Consensus 322 ~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~ip~~La~ 399 (459)
+++++| +|||||++| ++++ .+|++++. .++++|+++++|++||+.||++||+
T Consensus 397 ~a~~~g~iVpGGGa~e-----------------------~~~~---~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~ 450 (545)
T 1a6d_A 397 ITKEDGKFLWGGGAVE-----------------------AELA---MRLAKYANSVGGREQLAIEAFAKALEIIPRTLAE 450 (545)
T ss_dssp HHHHHCEEEETTTHHH-----------------------HHHH---HHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHhCCCEEeCcCHHH-----------------------HHHH---HHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 999999999 9999 99999985 5899999999999999999999999
Q ss_pred hcCCChHHHHHHHHhc---CCCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 400 ATGVDGSAVAEKLLEQ---DNPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 400 NaG~d~~~vl~kl~~~---~~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
|||+|+.+++.+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|+++
T Consensus 451 NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~i 512 (545)
T 1a6d_A 451 NAGIDPINTLIKLKADDEKGRISVGVDLDNNGVGDMKAKGVVDPLRVKTHALESAVEVATMI 512 (545)
T ss_dssp HHTSCHHHHHHHHHHHHHTTCTTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHhhcCCCCcceecccCccccchhcCccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999964 4568999999999999999999999999999999999999975
No 18
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=1e-75 Score=626.05 Aligned_cols=365 Identities=12% Similarity=0.142 Sum_probs=323.8
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
+.||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 48 ~iTnDG~tIlk~i~v~hP-------------~Akll~e~a~~qd~~~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~ 114 (512)
T 3iyg_Q 48 FVTNDAATILRELEVQHP-------------AAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRLGLSVSEVIE 114 (512)
T ss_pred EEeCCHHHHHHHcccCCH-------------HHHHHHHHHHHhhhhhCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 689999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhh----h----------heeccCCC-----chhHHHHHHHHHHHhccC-ccEEEE-------cCC
Q 040169 85 EIYMAFEAIKGHLKCRA----R----------VGRTAANE-----DKRIDVLLTEVMEKVGKE-GLFIIY-------DEE 137 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s----~----------vA~~ss~~-----d~~la~li~~av~~vg~~-g~I~i~-------~g~ 137 (459)
||++|.+.++++|++++ + +|++|.+. +++|++++++|+.+++++ +.|.++ .|+
T Consensus 115 G~~~A~~~a~~~L~~~~~~~~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~i~v~~I~i~k~~Gg 194 (512)
T 3iyg_Q 115 GYEIACKKAHEILPDLVCCSAKNLRDVDEVSSLLHTSVMSKQYGNEVFLAKLIAQACVSIFPDSGHFNVDNIRVCKILGS 194 (512)
T ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCHHHHHHHHHHHhCCCCccchHHHHHHHHHHHHHHhccCCcccHhHeeEeeccCC
Confidence 99999999999999983 2 66666543 789999999999999876 444433 488
Q ss_pred CccceeEEEEeEEEeccccccccccc-ccccc-----------------------------------------------C
Q 040169 138 KKKNELKFLRGMKLNWGAVSSFFIDD-ETQTC-----------------------------------------------K 169 (459)
Q Consensus 138 ~~~d~~~~v~G~~~~~g~~~~~~~~~-~~~~~-----------------------------------------------~ 169 (459)
++ +++++++||+|+++|.+ |+++ ++.++ +
T Consensus 195 s~-~ds~lv~G~~~dk~~~~--~~~~~~n~kI~ll~~~le~~~~e~k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g 271 (512)
T 3iyg_Q 195 GV-HSSSVLHGMVFKKETEG--DVTSVKDAKIAVYSCPFDGMITETKGTVLIKSAEELMNFSKGEENLMDAQVKAIADTG 271 (512)
T ss_pred Cc-ccceEEeeEEEecCcCC--CCcccccCceEEEecccccccccccceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 87 68999999999999975 5554 43222 7
Q ss_pred CCEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccceeeeEEEE--
Q 040169 170 QPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGSCKEVVI-- 247 (459)
Q Consensus 170 ~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~a~~v~i-- 247 (459)
.||+|++++|++.+++.|. + .+|++||+|+++ +|+|||++|||+++++... +++++||+|+.|++
T Consensus 272 ~~vvi~~~~I~~la~~~l~--k----~~I~av~~~~~~-----dle~ia~~tGa~iis~l~~--~~~~~LG~a~~v~~~~ 338 (512)
T 3iyg_Q 272 ANVVVTGGRVADMALHYAN--K----YNIMLVRLNSKW-----DLRRLCKTVGATALPRLNP--PVLEEMGHCDSVYLSE 338 (512)
T ss_pred CCEEEECCCccHHHHHHHH--H----CCeEEEEeCCHH-----HHHHHHHHhCCEEeccccc--CCHHHCCcccEEEEEE
Confidence 8999999999998887554 3 578999998754 5999999999999998763 56789999999975
Q ss_pred -ecceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHHHHHH
Q 040169 248 -LDNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNALNAVK 321 (459)
Q Consensus 248 -~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl~~~k 321 (459)
++++++++.+|+. +++++||++||+|+ ++|++|||||++|
T Consensus 339 ~g~~~~~~~~~~~~----------------------------------~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r 384 (512)
T 3iyg_Q 339 VGDTQVVVFKHEKE----------------------------------DGAISTIVLRGSTDNLMDDIERAVDDGVNTFK 384 (512)
T ss_pred eCCeEEEEEEcccC----------------------------------CCceEEEEECCCcHHHHHHHHHHHHHHHHHHH
Confidence 4668899987632 35689999999998 9999999999999
Q ss_pred HHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHhhHHHHHHH
Q 040169 322 AAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALKMPVCTIAS 399 (459)
Q Consensus 322 ~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~ip~~La~ 399 (459)
+++++| +|||||++| ++++ ..|++|+. .+|++|+|+++|++||+.||++||+
T Consensus 385 ~a~~~~~iVpGGGa~e-----------------------~~~s---~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~ 438 (512)
T 3iyg_Q 385 VLTRDKRLVPGGGATE-----------------------IELA---KQITSYGETCPGLEQYAIKKFAEAFEAIPRALAE 438 (512)
T ss_pred HHHhCCCEecCCcHHH-----------------------HHHH---HHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 999999999 9999 99999985 4899999999999999999999999
Q ss_pred hcCCChHHHHHHHHhc---CCCCeeEecCCC--ccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 400 ATGVDGSAVAEKLLEQ---DNPDVGYDPARG--EYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 400 NaG~d~~~vl~kl~~~---~~~~~Gid~~~g--~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
|||+|+.+++.+|++. +++++|||+.+| +|.||++.|||||++||+++|++|+++|+++
T Consensus 439 NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~i 502 (512)
T 3iyg_Q 439 NSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDMLEAGVLDTYLGKYWAIKLATNAAVTV 502 (512)
T ss_pred hcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchHhccCeEcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999874 567899999965 9999999999999999999999999999975
No 19
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=1.2e-76 Score=635.04 Aligned_cols=369 Identities=14% Similarity=0.113 Sum_probs=328.6
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +|+|++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 56 ~iTnDG~tIlk~i~v~hP-------------~akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~ 122 (528)
T 3p9d_D 56 IISNDGHTILKQMAILHP-------------VARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIAD 122 (528)
T ss_dssp EEECCHHHHHHHSCCCCT-------------THHHHHHHHHHHHHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EEECCHHHHHHHcccCCH-------------HHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHH
Confidence 579999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh------------heeccCC------CchhHHHHHHHHHHHhcc--CccEEEE-------cCC
Q 040169 85 EIYMAFEAIKGHLKCRAR------------VGRTAAN------EDKRIDVLLTEVMEKVGK--EGLFIIY-------DEE 137 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~------------vA~~ss~------~d~~la~li~~av~~vg~--~g~I~i~-------~g~ 137 (459)
||++|.+.++++|+++++ +|++|.+ ++++|++++++|+.+++. ++.|.++ +|+
T Consensus 123 G~~~A~~~a~~~L~~~s~~v~~~~~e~l~~va~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg 202 (528)
T 3p9d_D 123 SFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGG 202 (528)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCSCCHHHHHHHHHHHSCSSSCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSS
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHhcCCccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCC
Confidence 999999999999998875 6666643 479999999999999986 3444433 388
Q ss_pred CccceeEEEEeEEEeccccccc-cccc-ccccc-----------------------------------------------
Q 040169 138 KKKNELKFLRGMKLNWGAVSSF-FIDD-ETQTC----------------------------------------------- 168 (459)
Q Consensus 138 ~~~d~~~~v~G~~~~~g~~~~~-~~~~-~~~~~----------------------------------------------- 168 (459)
++. ++++++||+|+++|.||+ |+.. ++.++
T Consensus 203 ~~~-ds~lv~G~v~dk~~~~~~~m~~~ien~kIll~~~~le~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~ 281 (528)
T 3p9d_D 203 TID-DTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQISPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKA 281 (528)
T ss_dssp CSC-CCEEESSCBCCCCCCCSSSCCSEESSEEEEEECCCSSCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred Ccc-ceEEEeeeEEeecccCcccCcccccCceEEEEeccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 885 689999999999999999 6655 55433
Q ss_pred CCCEEEEeccc-----hhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccceeee
Q 040169 169 KQPLFIIAEDV-----EVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGSCK 243 (459)
Q Consensus 169 ~~~l~ii~~~i-----~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~a~ 243 (459)
+.||+|++++| +++++++|..|+ |++||. .++.+|+|||++|||+++++.+ ++++++||+|+
T Consensus 282 g~~vvi~~~~I~~~a~~~~al~~L~~~~------I~av~~-----~~k~~le~ia~~tGa~ii~~~~--~l~~~~LG~a~ 348 (528)
T 3p9d_D 282 KCNVLLIQKSILRDAVNDLALHFLSKLN------IMVVKD-----IEREEIEFLSKGLGCKPIADIE--LFTEDRLDSAD 348 (528)
T ss_dssp TCCEEEESSCSCTTSCSCHHHHHHTTTS------CCEEEC-----CCTHHHHHHHHHHTCCCCSCST--TCCSSSEEEES
T ss_pred CCCEEEEeCCcccccCCHHHHHHHHHcC------cEEEEe-----CCHHHHHHHHHHHCCEEecccc--cCCHHHCCccc
Confidence 78999999999 999999888664 467764 4577899999999999999875 35688999999
Q ss_pred EEE---EecceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhH
Q 040169 244 EVV---ILDNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVN 315 (459)
Q Consensus 244 ~v~---i~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~D 315 (459)
.|+ +++++++++.+|.... .++.+||++||+|+ ++|++||
T Consensus 349 ~v~~~~ig~~~~~~i~g~~~~~--------------------------------~~~~~tI~lrG~te~~l~E~kr~i~D 396 (528)
T 3p9d_D 349 LVEEIDSDGSKIVRVTGIRNNN--------------------------------ARPTVSVVIRGANNMIIDETERSLHD 396 (528)
T ss_dssp CEECCEETTEECCBCTTBCCGG--------------------------------GCCCCEEECCCSSTTHHHHHHHHHTT
T ss_pred EEEEEEECCEEEEEEEcccccC--------------------------------CCceEEEEEcCCCHHHHHHHHHHHHH
Confidence 997 4577888898875311 15689999999998 9999999
Q ss_pred HHHHHHHHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHhhH
Q 040169 316 ALNAVKAAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALKMP 393 (459)
Q Consensus 316 Al~~~k~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~i 393 (459)
|||++|+++++| +|||||++| ++++ .+|++++. .+|++|+|+++|++||+.|
T Consensus 397 Al~~~r~av~~~~iVpGGGa~e-----------------------~~~s---~~L~~~~~~~~g~eq~~i~~~a~ALe~i 450 (528)
T 3p9d_D 397 ALCVIRCLVKERGLIAGGGAPE-----------------------IEIS---RRLSKEARSMEGVQAFIWQEFASALEVI 450 (528)
T ss_dssp THHHHHHHHHSSCEEETTTHHH-----------------------HHHH---HHHHHCCTTSCHHHHTTHHHHHHHHTHH
T ss_pred HHHHHHHHHhcCCccCCCCHHH-----------------------HHHH---HHHHHHhhccChHHHHHHHHHHHHHHHH
Confidence 999999999998 999999999 9999 99999975 4899999999999999999
Q ss_pred HHHHHHhcCCChHHHHHHHHhc---CCCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 394 VCTIASATGVDGSAVAEKLLEQ---DNPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 394 p~~La~NaG~d~~~vl~kl~~~---~~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
|++||+|||+|+.+++.+|++. +++++|||+.+|+|.||++.|||||++||+++|++|+++|+++
T Consensus 451 p~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~i 518 (528)
T 3p9d_D 451 PTTLAENAGLNSIKVVTELRSKHENGELNDGISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSI 518 (528)
T ss_dssp HHHHHHTTSSCHHHHHHHHTTCCCSSSCCCCCCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHhccCCccceecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999875 4578999999999999999999999999999999999999975
No 20
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=2.5e-75 Score=628.70 Aligned_cols=366 Identities=14% Similarity=0.164 Sum_probs=324.7
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 82 ~iTnDG~tIlk~i~v~hP-------------~Akll~e~a~~qd~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~ 148 (562)
T 3p9d_E 82 TITNDGATILSQMELDNE-------------IAKLLVQLSKSQDDEIGDGTTGVVVLASALLDQALELIQKGIHPIKIAN 148 (562)
T ss_dssp EEESCHHHHHHHSCCCSH-------------HHHHHHHHHHHHHHHTSSCTTHHHHHHHHHHHHHHHHHTTTCCHHHHHH
T ss_pred EEECCHHHHHHHccCCCH-------------HHHHHHHHHHHHHhhcCCCcccHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 589999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh----------------heeccC------CCchhHHHHHHHHHHHhccC-------ccEEEE-
Q 040169 85 EIYMAFEAIKGHLKCRAR----------------VGRTAA------NEDKRIDVLLTEVMEKVGKE-------GLFIIY- 134 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~----------------vA~~ss------~~d~~la~li~~av~~vg~~-------g~I~i~- 134 (459)
||++|.+.++++|+++++ +|++|. .+.+.|+++++||+.++... +.|.++
T Consensus 149 G~~~A~~~a~~~L~~~s~~v~~~~~~~~~e~L~~vA~tSl~sK~i~~~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k 228 (562)
T 3p9d_E 149 GFDEAAKLAISKLEETCDDISASNDELFRDFLLRAAKTSLGSKIVSKDHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQG 228 (562)
T ss_dssp HHHHHHHHHHHHTTTTTSSSSBCCCSSCHHHHHHHHHHHHSSSTTTTTHHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHHHHhccCcCCCcchhhHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHheeecccccCCCCcccEEEEE
Confidence 999999999999987653 555443 24678999999999988642 234444
Q ss_pred -cCCCccceeEEEEeEEEecccccccccccc-------cccc--------------------------------------
Q 040169 135 -DEEKKKNELKFLRGMKLNWGAVSSFFIDDE-------TQTC-------------------------------------- 168 (459)
Q Consensus 135 -~g~~~~d~~~~v~G~~~~~g~~~~~~~~~~-------~~~~-------------------------------------- 168 (459)
+|+++. ++++++|++|+++|.||+|+++- +.++
T Consensus 229 ~~Ggs~~-ds~lveGmv~dk~~~sp~m~~~~~~~~~~~~~kIall~~~le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~ 307 (562)
T 3p9d_E 229 RVGGSIS-DSKLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTCPFEPPKPKTKHKLDISSVEEYQKLQTYEQDKFK 307 (562)
T ss_dssp ESSSCGG-GCEEESSEEESSCCCTTSCCC-----TTCSSCEECEEESCCSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHH
T ss_pred ecCCChh-hhceeeeEEEecCCCCCCcCcccccccccccceEEEecccccccccccCceEEECCHHHHHHHHHHHHHHHH
Confidence 688886 57999999999999999997641 2111
Q ss_pred ---------CCCEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccc
Q 040169 169 ---------KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKL 239 (459)
Q Consensus 169 ---------~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~L 239 (459)
+.||+|++++|+++++++|+.|++. +++.+ ++.+|+|||++|||+++++... +++++|
T Consensus 308 ~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~------~v~~v-----~k~~le~ia~~TGa~iis~l~~--l~~~~L 374 (562)
T 3p9d_E 308 EMIDDVKKAGADVVICQWGFDDEANHLLLQNDLP------AVRWV-----GGQELEHIAISTNGRIVPRFQD--LSKDKL 374 (562)
T ss_dssp HHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCC------CEECC-----CTTTHHHHHHHHCCCEEESSSC--CCTTSC
T ss_pred HHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCE------EEecc-----CHHHHHHHHHHhCCEEEecccc--CCHHHC
Confidence 7899999999999999999988763 56554 4678999999999999998663 568899
Q ss_pred eeeeEEEE-----ecceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----c
Q 040169 240 GSCKEVVI-----LDNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----K 309 (459)
Q Consensus 240 G~a~~v~i-----~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~ 309 (459)
|+|+.|++ ++++++||++|++++ .++|++||+|+ +
T Consensus 375 G~a~~v~~~~ig~~~~~~~~i~g~~~~~-----------------------------------~~TIllrG~te~~l~E~ 419 (562)
T 3p9d_E 375 GTCSRIYEQEFGTTKDRMLIIEQSKETK-----------------------------------TVTCFVRGSNKMIVDEA 419 (562)
T ss_dssp EECSCEEEECCSSSSCCEEEECCCSCCS-----------------------------------CCEEEEECTTTTTHHHH
T ss_pred CcceEEEEEEeccCCceEEEEecCCCCC-----------------------------------eEEEEEeCCCHHHHHHH
Confidence 99999987 368999999987754 56799999998 9
Q ss_pred hhhhhHHHHHHHHHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHH
Q 040169 310 NKRIVNALNAVKAAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQ 387 (459)
Q Consensus 310 ~r~i~DAl~~~k~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a 387 (459)
+|++|||||++|+++++| +|||||++| ++++ ..|++++. .+|++|+|+++|+
T Consensus 420 kr~i~DAL~~~r~av~~g~iVpGGGa~e-----------------------~~~s---~~L~~~~~~~~g~eq~~i~~~a 473 (562)
T 3p9d_E 420 ERALHDSLCVVRNLVKDSRVVYGGGAAE-----------------------VTMS---LAVSEEADKQRGIDQYAFRGFA 473 (562)
T ss_dssp THHHHHHHHHHHHHHHSCCEEETTTHHH-----------------------HHHH---HHHHHHHHTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcCCCCcHHH-----------------------HHHH---HHHHHHhccCccHHHHHHHHHH
Confidence 999999999999999999 999999999 9999 99999975 4899999999999
Q ss_pred HHHhhHHHHHHHhcCCChHHHHHHHHhc----CCCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 388 QALKMPVCTIASATGVDGSAVAEKLLEQ----DNPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 388 ~AL~~ip~~La~NaG~d~~~vl~kl~~~----~~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
+||+.||++||+|||+|+.+++.+|++. +++++|||+.+|+|.||++.|||||++||+++|++|+++|+++
T Consensus 474 ~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~i 548 (562)
T 3p9d_E 474 QALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDCLGYGSNDMKELFVVDPFIGKKQQILLATQLCRMI 548 (562)
T ss_dssp HHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBTTTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEecCCCcccchHhccCEEcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999874 4578999999999999999999999999999999999999975
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1e-76 Score=635.78 Aligned_cols=365 Identities=16% Similarity=0.174 Sum_probs=326.6
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHc-CCCHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEA-GVDAMDLK 83 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~-Gi~P~~I~ 83 (459)
+.||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++.+ |+||+.|+
T Consensus 55 ~iTnDG~tIlk~i~~~hP-------------~Akll~e~a~~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~ 121 (527)
T 3p9d_B 55 MVTNDGATILKSIPLDNP-------------AAKVLVNISKVQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTII 121 (527)
T ss_dssp ECCCCHHHHHHTCCCCCH-------------HHHHHHHHHHHHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHH
T ss_pred EEeCCHHHHHHHhccCCH-------------HHHHHHHHHHHhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 689999999999999999 9999999999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHHhhhh---------------heeccCC------CchhHHHHHHHHHHHhccCc---cEEEE--cCC
Q 040169 84 DEIYMAFEAIKGHLKCRAR---------------VGRTAAN------EDKRIDVLLTEVMEKVGKEG---LFIIY--DEE 137 (459)
Q Consensus 84 ~G~~~a~~~~l~~L~~~s~---------------vA~~ss~------~d~~la~li~~av~~vg~~g---~I~i~--~g~ 137 (459)
+||++|.+.++++|+++++ +|++|.+ +++.|++++++|+.+++.++ .|.++ .|+
T Consensus 122 ~G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~l~~vA~tSl~sK~~~~~~~~i~~li~dAv~~V~~~~~~~~I~V~k~~gg 201 (527)
T 3p9d_B 122 EGYRLASAAALDALTKAAVDNSHDKTMFREDLIHIAKTTLSSKILSQDKDHFAELATNAILRLKGSTNLEHIQIIKILGG 201 (527)
T ss_dssp HHHHHHHHHHHHHHHHTCBCCCCCHHHHHHHHHHHHHHHHTTSGGGGGHHHHHHHHHHHHHTTCTTCCTTSSCCCBCCCS
T ss_pred HHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHhcccCCcceEEEEEcCCC
Confidence 9999999999999998763 5666644 37899999999999999886 67776 477
Q ss_pred CccceeEEEEeEEEeccccccccccc-cccc---------------------c---------------------------
Q 040169 138 KKKNELKFLRGMKLNWGAVSSFFIDD-ETQT---------------------C--------------------------- 168 (459)
Q Consensus 138 ~~~d~~~~v~G~~~~~g~~~~~~~~~-~~~~---------------------~--------------------------- 168 (459)
++. ++++++||+||++|.||+ +.. ++.+ +
T Consensus 202 ~~~-ds~lv~G~~~dk~~~~~~-p~~~~n~kIlll~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~ 279 (527)
T 3p9d_B 202 KLS-DSFLDEGFILAKKFGNNQ-PKRIENAKILIANTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKF 279 (527)
T ss_dssp SSS-CCCEESSCCCSCCCSSSC-CSCCSSCEEEEECSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred Ccc-ccEEEEeEEEecccCCCC-CeeeecceEEEeccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 774 689999999999999986 222 2111 1
Q ss_pred CCCEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccceeeeEEE--
Q 040169 169 KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGSCKEVV-- 246 (459)
Q Consensus 169 ~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~a~~v~-- 246 (459)
+.|++|++++|+++++++|..|+ +++|++|+++ +|+|||++|||+++++.+ ++++++||+|+.|+
T Consensus 280 g~~vvi~~~~I~~~al~~L~~~~------i~av~~~~~~-----dle~ia~~tGa~iv~~~~--~~~~~~LG~a~~v~~~ 346 (527)
T 3p9d_B 280 GINTFINRQLIYDYPEQLFTDLG------INSIEHADFE-----GVERLALVTGGEVVSTFD--EPSKCKLGECDVIEEI 346 (527)
T ss_dssp CCBEEESSCCCTTTHHHHHHHTC------BCCCCCCHHH-----HHHHHHHHTCCCCCSTTS--CCTTSCEECSBCCBCC
T ss_pred CCCEEEECCCCCHHHHHHHHHCC------CEEEecCCHH-----HHHHHHHHhCCEEecchh--hCCHHHCCCCcEEEEE
Confidence 78999999999999999998875 4788887654 599999999999999865 35688999999997
Q ss_pred -EecceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHHHHH
Q 040169 247 -ILDNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNALNAV 320 (459)
Q Consensus 247 -i~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl~~~ 320 (459)
+++++++++.||++ ++++||++||+|+ ++|++|||||++
T Consensus 347 ~ig~~~~~~~~g~~~-----------------------------------~~~~tI~lrg~te~~l~E~kr~i~DAl~~~ 391 (527)
T 3p9d_B 347 MLGEQPFLKFSGCKA-----------------------------------GEACTIVLRGATDQTLDEAERSLHDALSVL 391 (527)
T ss_dssp CSSSCCBCCBCSSCC-----------------------------------SCCEECBCCTTCTTHHHHHHTHHHHHHHHH
T ss_pred EecceEEEEEECCCC-----------------------------------CCEEEEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 67899999999865 3589999999998 999999999999
Q ss_pred HHHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHhhHHHHHH
Q 040169 321 KAAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALKMPVCTIA 398 (459)
Q Consensus 321 k~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~ip~~La 398 (459)
|+++++| +|||||++| ++++ ..|++++. .+|++|+|+++|++||+.||++||
T Consensus 392 r~av~~g~iVpGGGa~e-----------------------~~~s---~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La 445 (527)
T 3p9d_B 392 SQTTKETRTVLGGGCAE-----------------------MVMS---KAVDTEAQNIDGKKSLAVEAFARALRQLPTILA 445 (527)
T ss_dssp HHHHHCCCEEETTTHHH-----------------------HHHH---HHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCcccCCcHHH-----------------------HHHH---HHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 999999999 9999 99999975 489999999999999999999999
Q ss_pred HhcCCChHHHHHHHHhc---CCCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 399 SATGVDGSAVAEKLLEQ---DNPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 399 ~NaG~d~~~vl~kl~~~---~~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
+|||+|+.+++.+|++. +++++|||+.+|+|+||++.|||||++||+++|++|+++|+++
T Consensus 446 ~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~i 508 (527)
T 3p9d_B 446 DNAGFDSSELVSKLRSSIYNGISTSGLDLNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVL 508 (527)
T ss_dssp HHHTSCSHHHHHHHHHHHHHTCSCCCCCSSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHH
T ss_pred hccCCCHHHHHHHHHHHHhcCCCceeEECCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHH
Confidence 99999999999999875 4678999999999999999999999999999999999999975
No 22
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.5e-75 Score=619.68 Aligned_cols=365 Identities=16% Similarity=0.218 Sum_probs=321.5
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 47 ~iTnDG~tIlk~i~v~hp-------------~akll~~~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~li~~GihP~~I~~ 113 (517)
T 3iyg_Z 47 KLTKDGNVLLHEMQIQHP-------------TASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITE 113 (517)
T ss_pred EEECCHHHHHHHccCcCH-------------HHHHHHHHHHHHHHHhCCCceeHHHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 689999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh-----------heeccCC------CchhHHHHHHHHHHHhccCc------c--EEEEcCCCc
Q 040169 85 EIYMAFEAIKGHLKCRAR-----------VGRTAAN------EDKRIDVLLTEVMEKVGKEG------L--FIIYDEEKK 139 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~-----------vA~~ss~------~d~~la~li~~av~~vg~~g------~--I~i~~g~~~ 139 (459)
||++|.+.++++|+++++ +|++|.+ ..+.|+++++||+.++...+ . |...+|++.
T Consensus 114 G~~~A~~~a~~~L~~~s~~v~~~~~~L~~va~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~dl~~I~I~k~~Gg~~ 193 (517)
T 3iyg_Z 114 GFEAAKEKALQFLEQVKVSKEMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMVEIMEMKHKSE 193 (517)
T ss_pred HHHHHHHHHHHHHHhhCcCCCCCHHHHHHHHHHHhccccchhHHHHHHHHHHHHhheeccCCCcCChhHheeeeecCCCc
Confidence 999999999999998874 6666543 35778899999988775422 2 333367776
Q ss_pred cceeEEEEeEEEeccccccccccc-ccccc--------------------------------------------------
Q 040169 140 KNELKFLRGMKLNWGAVSSFFIDD-ETQTC-------------------------------------------------- 168 (459)
Q Consensus 140 ~d~~~~v~G~~~~~g~~~~~~~~~-~~~~~-------------------------------------------------- 168 (459)
+++++++||+|+++|.||+|+.. ++.++
T Consensus 194 -~ds~lv~G~v~dk~~~~p~m~~~ien~kIll~~~~le~~k~e~~~~~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~ 272 (517)
T 3iyg_Z 194 -TDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKK 272 (517)
T ss_pred -cccceEeeEEEeccCCCCCccccccCCeEEEecccccccccccceeEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 57899999999999999999765 55433
Q ss_pred -----CCCEEEEe-ccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeecccccccccc-cee
Q 040169 169 -----KQPLFIIA-EDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLK-LGS 241 (459)
Q Consensus 169 -----~~~l~ii~-~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~-LG~ 241 (459)
++|++|++ ++|+++++++|..+. +++|++. ++.+|+|||++|||+++++.+. +++++ ||+
T Consensus 273 v~~~~~~~lvIi~~~~I~d~al~~L~~~g------I~~v~~v-----~~~~leria~~tGa~iv~~l~~--l~~~~~LG~ 339 (517)
T 3iyg_Z 273 VCGDSDKGFVVINQKGIDPFSLDALAKEG------IIALRRA-----KRRNMERLTLACGGIALNSLDD--LNPDCLLGH 339 (517)
T ss_pred hhhccCCceEEEecccCCHHHHHHHHHCC------CEEEEec-----CHHHHHHHHHHhCCEEecchhh--CcccccCCc
Confidence 24666775 899999999888653 4566543 4568999999999999998763 56788 999
Q ss_pred eeEE---EEecceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhh
Q 040169 242 CKEV---VILDNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRI 313 (459)
Q Consensus 242 a~~v---~i~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i 313 (459)
|+ | .+++++++|+++|++++ .+||++||+|+ ++|++
T Consensus 340 a~-v~e~~ig~~~~~~~~g~~~~~-----------------------------------~~TI~lrG~t~~~l~E~kr~l 383 (517)
T 3iyg_Z 340 AG-VYEYTLGEEKFTFIEKCNNPR-----------------------------------SVTLLIKGPNKHTLTQIKDAI 383 (517)
T ss_pred ce-EEEEEEcCceEEEEeCCCCch-----------------------------------hheeeecCCcHHHHHHHHHHH
Confidence 99 9 57899999999998754 46899999998 99999
Q ss_pred hHHHHHHHHHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHh
Q 040169 314 VNALNAVKAAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALK 391 (459)
Q Consensus 314 ~DAl~~~k~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~ 391 (459)
|||||++|+++++| +|||||++| ++++ ..|++|+. .+|++|+|+++|++||+
T Consensus 384 ~DAl~~~r~av~~~~iVpGGGa~e-----------------------~~~s---~~L~~~~~~~~g~eq~~i~~~a~ALe 437 (517)
T 3iyg_Z 384 RDGLRAVKNAIDDGCVVPGAGAVE-----------------------VAMA---EALVKYKPSVKGRAQLGVQAFADALL 437 (517)
T ss_pred HHHHHHHHHHHhcceEecCccHHH-----------------------HHHH---HHHHHHhccCCHHHHHHHHHHHHHHH
Confidence 99999999999999 999999999 9999 99999986 48999999999999999
Q ss_pred hHHHHHHHhcCCChHHHHHHHHhc---CCCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 392 MPVCTIASATGVDGSAVAEKLLEQ---DNPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 392 ~ip~~La~NaG~d~~~vl~kl~~~---~~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
.+|++||+|||+|+.+++.+|++. ++.++|||+.+|++.||++.|||||+.||+++|++|+++|+++
T Consensus 438 ~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~i 507 (517)
T 3iyg_Z 438 IIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGEPMVAAEAGIWDNYCVKKQLLHSCTVIATNI 507 (517)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCcccchhhccCeecHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999875 4678999999999999999999999999999999999999975
No 23
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.2e-74 Score=614.79 Aligned_cols=366 Identities=14% Similarity=0.158 Sum_probs=320.1
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +|||++++|++||+++||||||+||||++||++|.+++++|+||+.|++
T Consensus 46 ~iTnDG~tIlk~i~v~hP-------------~Akll~e~a~~qd~e~GDGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~ 112 (515)
T 3iyg_G 46 VMTNDGNAILREIQVQHP-------------AAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVIS 112 (515)
T ss_pred EEECCHHHHHHhcccCCH-------------HHHHHHHHHHHhhhhhCCChhhHHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 589999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh------------heeccCC------CchhHHHHHHHHHHHhccC--c--------cEEEE--
Q 040169 85 EIYMAFEAIKGHLKCRAR------------VGRTAAN------EDKRIDVLLTEVMEKVGKE--G--------LFIIY-- 134 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~------------vA~~ss~------~d~~la~li~~av~~vg~~--g--------~I~i~-- 134 (459)
||++|.+.++++|+++++ +|++|.+ +.+.++++++||+..+..+ + .|.++
T Consensus 113 G~~~A~~~a~~~L~~~s~~v~~~~~~~l~~va~tsl~sK~i~~~~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki 192 (515)
T 3iyg_G 113 AYRKALDDMISTLKKISIPVDTSNRDTMLNIINSSITTKVISRWSSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKI 192 (515)
T ss_pred HHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHhcccccCCCcccchhheeEEEEe
Confidence 999999999999998875 5555532 3566788999999988622 2 14444
Q ss_pred cCCCccceeEEEEeEEEeccccccccccc-ccccc---------------------------------------------
Q 040169 135 DEEKKKNELKFLRGMKLNWGAVSSFFIDD-ETQTC--------------------------------------------- 168 (459)
Q Consensus 135 ~g~~~~d~~~~v~G~~~~~g~~~~~~~~~-~~~~~--------------------------------------------- 168 (459)
+|+++. ++++++||+|+++|.||.|+.. ++.++
T Consensus 193 ~Ggs~~-ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~ 271 (515)
T 3iyg_G 193 PGGIIE-DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDII 271 (515)
T ss_pred cCCCcc-cceEEeeEEEeCCCCCCCCcceeeeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688884 7899999999999999998766 55443
Q ss_pred -CCC-EEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeecccccccccccee-eeEE
Q 040169 169 -KQP-LFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGS-CKEV 245 (459)
Q Consensus 169 -~~~-l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~-a~~v 245 (459)
..| ++|+.++|++.+++.|..+ +|+++ ++.++.+|+|||++|||+++++.+. +++++||+ |+.|
T Consensus 272 ~~g~~vIi~~~~I~~~al~~L~~~------~I~av-----~~~~k~~leria~~tGa~ii~~l~~--l~~~~LG~~a~~v 338 (515)
T 3iyg_G 272 QLKPDVVITEKGISDLAQHYLMRA------NITAI-----RRVRKTDNNRIARACGARIVSRPEE--LREEDVGTGAGLL 338 (515)
T ss_pred hCCCCEEEECCccCHHHHHHHHHC------Cceee-----ccCCHHHHHHHHHHhCCeeeccccc--cChhhcCCcccEE
Confidence 234 4555568999999987753 44665 5667889999999999999998763 56889999 9999
Q ss_pred EE---ecceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHH
Q 040169 246 VI---LDNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNAL 317 (459)
Q Consensus 246 ~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl 317 (459)
++ ++++|+||+||++++ .+||++||+|+ .+|++||||
T Consensus 339 ~~~~~g~~~~~~i~g~~~~~-----------------------------------~~TIllrG~t~~~l~E~er~i~Dal 383 (515)
T 3iyg_G 339 EIKKIGDEYFTFITECKDPK-----------------------------------ACTILLRGASKEILSEVERNLQDAM 383 (515)
T ss_pred EEEEECCceEEEEeCCCCCC-----------------------------------eEEEEEcCCCHHHHHHHHHHHHHHH
Confidence 75 466899999998754 68999999997 999999999
Q ss_pred HHHHHHHhC-CcccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHhhHHH
Q 040169 318 NAVKAAMEG-GIIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALKMPVC 395 (459)
Q Consensus 318 ~~~k~a~~~-gvVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~ip~ 395 (459)
|++|+++++ ++|||||++| ++++ ..|++|+. .+|++|+|+++|++||+.||+
T Consensus 384 ~~~r~~~~~~~ivpGGGa~e-----------------------~~~~---~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~ 437 (515)
T 3iyg_G 384 QVCRNVLLDPQLVPGGGASE-----------------------MAVA---HALTEKSKAMTGVEQWPYRAVAQALEVIPR 437 (515)
T ss_pred HHHHHHhhCCcEEeCCCHHH-----------------------HHHH---HHHHHHhhccCcHHHHHHHHHHHHHHHHHH
Confidence 999999965 6999999999 9999 99999975 589999999999999999999
Q ss_pred HHHHhcCCChHHHHHHHHhcC----CCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 396 TIASATGVDGSAVAEKLLEQD----NPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 396 ~La~NaG~d~~~vl~kl~~~~----~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
+||+|||+|+.+++.+|++.+ ++++|||+.+|++.||++.|||||+.||+++|++|+++|+++
T Consensus 438 ~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~~~~gi~dp~~vk~~al~~A~e~a~~i 504 (515)
T 3iyg_G 438 TLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLL 504 (515)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcccccHHcCCEEcHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999752 457999999999999999999999999999999999999975
No 24
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=1.1e-74 Score=622.30 Aligned_cols=365 Identities=13% Similarity=0.127 Sum_probs=320.3
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 61 ~ITnDG~TIlk~i~v~hP-------------~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~ 127 (550)
T 3p9d_G 61 TISNDGATILKLLDVVHP-------------AAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMK 127 (550)
T ss_dssp EEECCHHHHTTTSCCCSH-------------HHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHH
T ss_pred EEECCHHHHHHHccCCCH-------------HHHHHHHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 689999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh---------------heecc------CCCchhHHHHHHHHHHHhcc-C------ccEEEEcC
Q 040169 85 EIYMAFEAIKGHLKCRAR---------------VGRTA------ANEDKRIDVLLTEVMEKVGK-E------GLFIIYDE 136 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~---------------vA~~s------s~~d~~la~li~~av~~vg~-~------g~I~i~~g 136 (459)
||++|.+.++++|+++++ +|++| +.+++.|+++++||+.++++ + +.+.+ +|
T Consensus 128 G~~~A~~~a~~~L~~~s~~v~~~~~~~~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~~~dl~~I~Vikv-~G 206 (550)
T 3p9d_G 128 GYRKAVSLAVEKINELAVDITSEKSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRNDLDDKLIGIKKI-PG 206 (550)
T ss_dssp HHHHHHHHHHHHHHHSEECCCCC------CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSSSCCGGGCCCCBC-CS
T ss_pred HHHHHHHHHHHHHHHhcccCCCCcchhHHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCccccCchheeEEEe-cC
Confidence 999999999999998763 45554 23589999999999999984 3 33333 58
Q ss_pred CCccceeEEEEeEEEeccccccccccc----ccccc--------------------------------------------
Q 040169 137 EKKKNELKFLRGMKLNWGAVSSFFIDD----ETQTC-------------------------------------------- 168 (459)
Q Consensus 137 ~~~~d~~~~v~G~~~~~g~~~~~~~~~----~~~~~-------------------------------------------- 168 (459)
+++.+ +++++||+|+++|.||||.+. ++.++
T Consensus 207 g~~~d-s~lv~G~~~dk~~~s~yf~~~~~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I 285 (550)
T 3p9d_G 207 GAMEE-SLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQV 285 (550)
T ss_dssp SCGGG-CCCCSSEEECCCSSCTTCSCSCSCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccc-eeEEeeEEEeccccccccccCcccccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 88865 589999999999999987532 23222
Q ss_pred ---CCCEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccceeeeEE
Q 040169 169 ---KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGSCKEV 245 (459)
Q Consensus 169 ---~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~a~~v 245 (459)
+.++++++++|++.+++.|.. .++.++ ++.++.+|++||++|||+++++... +++++||+|+.|
T Consensus 286 ~~~g~~vVi~~~~I~dla~~~L~~------~gI~~v-----~~v~k~~lerIa~~tGa~iis~l~~--l~~~~LG~a~~v 352 (550)
T 3p9d_G 286 EETGANIVLSKLPIGDLATQFFAD------RNIFCA-----GRVSADDMNRVIQAVGGSIQSTTSD--IKPEHLGTCALF 352 (550)
T ss_dssp HTTTCSEEEESSCCCHHHHHTTGG------GTCEEE-----ECCCTTHHHHHHHHTCCCCBSSGGG--CCGGGCCCCSBC
T ss_pred HhcCCCEEEECCCccHHHHHHHHH------cCCccc-----cCcCHHHHHHHHHHhCCceecchhh--CCHHHcCCceEE
Confidence 678888888998877764442 233454 4557789999999999999998763 568899999999
Q ss_pred EE---ecceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhhhhHHH
Q 040169 246 VI---LDNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKRIVNAL 317 (459)
Q Consensus 246 ~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~i~DAl 317 (459)
++ ++++++++.||+++ +.+||++||+|+ ++|++||||
T Consensus 353 ~~~~ig~e~~~~~~g~~~~-----------------------------------~~~tI~lrG~te~~l~E~kr~l~DAl 397 (550)
T 3p9d_G 353 EEMQIGSERYNLFQGCPQA-----------------------------------KTCTLLLRGGAEQVIAEVERSLHDAI 397 (550)
T ss_dssp CCCCCSSSCCEEEBCCTTC-----------------------------------CCCCCCBCSSSHHHHHHHHHHHHHHH
T ss_pred EEEEeCCeEEEEEecCCCC-----------------------------------ceeEEEEeCCcHHHHHHHHHHHHhHH
Confidence 75 68899999998764 378899999997 999999999
Q ss_pred HHHHHHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHHHHhhHHH
Q 040169 318 NAVKAAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQALKMPVC 395 (459)
Q Consensus 318 ~~~k~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~AL~~ip~ 395 (459)
|++|+++++| +|||||++| ++++ ..|++|+. .++++|+|+++|++||+.||+
T Consensus 398 ~~~r~av~~g~iVpGGGa~e-----------------------~~~s---~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~ 451 (550)
T 3p9d_G 398 MIVKRALQNKLIVAGGGATE-----------------------MEVS---KCLRDYSKTIAGKQQMIINAFAKALEVIPR 451 (550)
T ss_dssp HHHHHHHHSCCEEETTTHHH-----------------------HHHH---HHHHHHHHTCCSTTHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHhcCCcccCCCHHH-----------------------HHHH---HHHHHHhhcCChHHHHHHHHHHHHHHHHHH
Confidence 9999999999 999999999 9999 99999975 489999999999999999999
Q ss_pred HHHHhcCCChHHHHHHHHhc---CCCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHhhc
Q 040169 396 TIASATGVDGSAVAEKLLEQ---DNPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLVQT 458 (459)
Q Consensus 396 ~La~NaG~d~~~vl~kl~~~---~~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~~~ 458 (459)
+||+|||+|+.+++.+|++. +++++|||+.+|+|.||++.|||||++||+++|++|+++|+++
T Consensus 452 ~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~i 517 (550)
T 3p9d_G 452 QLCENAGFDAIEILNKLRLAHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLI 517 (550)
T ss_dssp HHHHTSCSCHHHHHHHHHHHHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999874 4678999999999999999999999999999999999999975
No 25
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=4.9e-74 Score=617.22 Aligned_cols=366 Identities=15% Similarity=0.204 Sum_probs=321.6
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +|||++++|++||+++||||||++|||++||++|.+++++|+||+.|++
T Consensus 54 ~iTnDG~tIlk~i~v~hP-------------~akll~e~a~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~ 120 (546)
T 3p9d_F 54 KLTKDGKVLLTEMQIQSP-------------TAVLIARAAAAQDEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITD 120 (546)
T ss_dssp EEECCHHHHHHTSCCCCH-------------HHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHH
T ss_pred EEECCHHHHHHHccCcCH-------------HHHHHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHH
Confidence 589999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh--------------heeccCC------CchhHHHHHHHHHHHhccC-------ccEEEE--c
Q 040169 85 EIYMAFEAIKGHLKCRAR--------------VGRTAAN------EDKRIDVLLTEVMEKVGKE-------GLFIIY--D 135 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~--------------vA~~ss~------~d~~la~li~~av~~vg~~-------g~I~i~--~ 135 (459)
||++|.+.++++|+++++ +|++|.+ +.+.|+++++||+.++... ..|.+. +
T Consensus 121 G~~~A~~~a~~~L~~~a~~v~~~~~~~~~L~~vA~tsl~sKi~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~ 200 (546)
T 3p9d_F 121 GFEIARKESMKFLDEFKISKTNLSNDREFLLQVARSSLLTKVDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQ 200 (546)
T ss_dssp HHHHHHHHHHHHHHHHCCCCSSSSTTCHHHHHHHHHHTCSTTHHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCC
T ss_pred HHHHHHHHHHHHHHHhhccccccccCHHHHHHHHHHHhCCCcchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEec
Confidence 999999999999998864 5666643 3578999999999887521 135544 5
Q ss_pred CCCccceeEEEEeEEEeccccccccccc-ccccc----------------------------------------------
Q 040169 136 EEKKKNELKFLRGMKLNWGAVSSFFIDD-ETQTC---------------------------------------------- 168 (459)
Q Consensus 136 g~~~~d~~~~v~G~~~~~g~~~~~~~~~-~~~~~---------------------------------------------- 168 (459)
|++. +++++++||+|+++|.||+|+.. ++.++
T Consensus 201 Gg~~-~ds~lv~G~v~dk~~~~~~m~~~~en~kIll~~~~Le~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~ 279 (546)
T 3p9d_F 201 HLSP-KDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIID 279 (546)
T ss_dssp CSCT-TTCCCCSSCEESCCCCSSSSCSSBCSCCCCEECCCSSSCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCc-cccEEEeeEEEecccccccCcceecCceEEEecCcccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776 57899999999999999988765 54433
Q ss_pred -C---------CCEEEEe-ccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccc
Q 040169 169 -K---------QPLFIIA-EDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARL 237 (459)
Q Consensus 169 -~---------~~l~ii~-~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~ 237 (459)
+ +|++|++ ++|+++++++|+.|++ +++++. ++.+|+|||++|||+++++.+. ++++
T Consensus 280 ~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI------~~vr~v-----~~~~leria~~tGa~ii~~l~~--l~~~ 346 (546)
T 3p9d_F 280 LKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNI------LALRRA-----KRRNMERLQLVTGGEAQNSVED--LSPQ 346 (546)
T ss_dssp CC-----------CEEEESSCCCHHHHHHHTTTTC------EEECCC-----CHHHHHHHHHTTTBCCCCCCSS--CSTT
T ss_pred HHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCC------eeEecC-----CHHHHHHHHHHhCCEEecchhh--CCHh
Confidence 1 3656665 5999999999988764 577653 4568999999999999998663 5688
Q ss_pred cceeeeEE---EEecceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----c
Q 040169 238 KLGSCKEV---VILDNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----K 309 (459)
Q Consensus 238 ~LG~a~~v---~i~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~ 309 (459)
+||+|+.| .+++++|+|++||++++ .+||++||+|+ +
T Consensus 347 ~LG~a~~v~~~~ig~~~~~~i~g~~~~~-----------------------------------~~tI~lrG~te~~l~E~ 391 (546)
T 3p9d_F 347 ILGFSGLVYQETIGEEKFTYVTENTDPK-----------------------------------SCTILIKGSTHYALAQT 391 (546)
T ss_dssp CCBCCCCBCBCCCSSCCCEECSSCSCCS-----------------------------------CEEEECCCSCHHHHHHH
T ss_pred HCCcccEEEEEEecCceEEEEecCCCCc-----------------------------------eEEEEECCCCHHHHHHH
Confidence 99999999 57899999999998754 68999999998 9
Q ss_pred hhhhhHHHHHHHHHHhCC-cccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHH---hhc-CCchhHHHHH
Q 040169 310 NKRIVNALNAVKAAMEGG-IIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDK---LQT-TSLGGKIGVQ 384 (459)
Q Consensus 310 ~r~i~DAl~~~k~a~~~g-vVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~---~~~-~~~~e~~gi~ 384 (459)
+|++|||||++|+++++| +|||||++| ++++ ..|++ |+. .+|++|+|++
T Consensus 392 kr~l~DAl~~~r~av~~~~iVpGGGa~e-----------------------~~~s---~~L~~~~~~~~~~~g~eq~~i~ 445 (546)
T 3p9d_F 392 KDAVRDGLRAVANVLKDKNIIPGAGAFY-----------------------IALS---RYLRSANMNKLGAKGKTKTGIE 445 (546)
T ss_dssp HHHHHHHHHHHHHHTTSCCEEETTTHHH-----------------------HHHH---HHHHHHHTTTTTTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCcEEeCCCHHH-----------------------HHHH---HHHHhhhhhhhcCchHHHHHHH
Confidence 999999999999999998 999999999 9999 99998 564 4899999999
Q ss_pred HHHHHHhhHHHHHHHhcCCChHHHHHHHHhc--------CCCCeeEecCCCccccccccCcccchHHHHHHHHHHHHHHh
Q 040169 385 LLQQALKMPVCTIASATGVDGSAVAEKLLEQ--------DNPDVGYDPARGEYVDVIKLGIFDPMKLVIKELDDAIRLLV 456 (459)
Q Consensus 385 ~~a~AL~~ip~~La~NaG~d~~~vl~kl~~~--------~~~~~Gid~~~g~~~d~~~~gI~DP~~vk~~al~~A~~~a~ 456 (459)
+|++||+.||++||+|||+|+.+++.+|++. ++.++|||+.+|+|.||++.|||||+.||+++|++|+++|+
T Consensus 446 ~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~ 525 (546)
T 3p9d_F 446 AFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDAQDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIAS 525 (546)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHHTTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhhcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999864 45679999999999999999999999999999999999999
Q ss_pred hc
Q 040169 457 QT 458 (459)
Q Consensus 457 ~~ 458 (459)
++
T Consensus 526 ~i 527 (546)
T 3p9d_F 526 NL 527 (546)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 26
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=3.4e-73 Score=612.78 Aligned_cols=366 Identities=13% Similarity=0.119 Sum_probs=322.0
Q ss_pred cCCCcHHHHHhhcccCCCCCcCCcccccchHHHHHHHHHhchhccccCCCcChHHHHHHHHHHHHHHHHHcCCCHHHHHH
Q 040169 5 RLSWSRNYAAKDIELKKSPKVKDCSVIEESFLTGFMQQVKNPTCEPDEYGIKYLPVMHQAMCIEGRKVLEAGVDAMDLKD 84 (459)
Q Consensus 5 ~~t~d~~ti~~~i~~~~p~~~~~~~~i~en~~akll~~~a~~qd~evGDGTTtvvvLa~~Ll~~~~~li~~Gi~P~~I~~ 84 (459)
++||||+||||+|++.|| +||||+++|++||+++||||||++|||++||++|.+++.+|+||+.|++
T Consensus 63 ~ITnDG~TIlk~i~v~hP-------------~Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~ 129 (568)
T 3p9d_H 63 IITNDAATMLRELDIVHP-------------AVKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQ 129 (568)
T ss_dssp EEESCHHHHTTTCCCCCH-------------HHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHH
T ss_pred EEeCCHHHHHHHcccCCH-------------HHHHHHHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHH
Confidence 579999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhh--------------heeccC-----CCchhHHHHHHHHHHHhccC-----c-------cEEE
Q 040169 85 EIYMAFEAIKGHLKCRAR--------------VGRTAA-----NEDKRIDVLLTEVMEKVGKE-----G-------LFII 133 (459)
Q Consensus 85 G~~~a~~~~l~~L~~~s~--------------vA~~ss-----~~d~~la~li~~av~~vg~~-----g-------~I~i 133 (459)
||++|.+.++++|+++++ +|++|. +++++|+++++||+.+++.+ + .|.+
T Consensus 130 G~~~A~~~a~e~L~~~a~~v~~~~~~~~~l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I 209 (568)
T 3p9d_H 130 GYNMARKFTLKELDEMVVGEITDKNDKNELLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRV 209 (568)
T ss_dssp HHHHHHHHHHHHHHHHCCSCCCCCCTTHHHHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEE
T ss_pred HHHHHHHHHHHHHHHhccccCCCCCCHHHHHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEE
Confidence 999999999999998764 555542 24589999999999999764 2 4666
Q ss_pred E--cCCCccceeEEEEeEEEeccccccccccc-c---cccc---------------------------------------
Q 040169 134 Y--DEEKKKNELKFLRGMKLNWGAVSSFFIDD-E---TQTC--------------------------------------- 168 (459)
Q Consensus 134 ~--~g~~~~d~~~~v~G~~~~~g~~~~~~~~~-~---~~~~--------------------------------------- 168 (459)
+ +|+++. ++++++|++|+++|. .|+.. + +.++
T Consensus 210 ~k~~Ggs~~-dS~lv~G~v~dk~~~--~m~~~i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~ 286 (568)
T 3p9d_H 210 VKIMGGSLS-NSTVIKGMVFNREPE--GHVKSLSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDA 286 (568)
T ss_dssp EEEESSCGG-GCEEESSCCBSSCBS--SGGGSCCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHH
T ss_pred EEccCCCcc-hheeeccEEEeeccc--CCcEEEecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHH
Confidence 5 588885 579999999999985 34333 3 3222
Q ss_pred --------CCCEEEEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccce
Q 040169 169 --------KQPLFIIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLG 240 (459)
Q Consensus 169 --------~~~l~ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG 240 (459)
+.||+|++++|+++++++|..+ +|++||+|+ +.+|+|||++|||+++++... +++++||
T Consensus 287 ~v~~I~~~g~~vvi~~~~I~~~al~~L~~~------gI~av~~v~-----~~~leria~~tGa~ivs~l~~--l~~~~LG 353 (568)
T 3p9d_H 287 MMKEIADMGVECIVAGAGVGELALHYLNRY------GILVLKVPS-----KFELRRLCRVCGATPLPRLGA--PTPEELG 353 (568)
T ss_dssp HHHHHHHTTCCEEEECSCCCHHHHHHHHHH------TCEEECCCC-----HHHHHHHHHHHSCCCCSSSSC--CCGGGCE
T ss_pred HHHHHHhcCCeEEEECCCcChHHHHHHHHC------CeEEEecCC-----HHHHHHHHHHhCCEEEecccc--CCHHHCC
Confidence 7899999999999999988876 468999885 447999999999999998663 5688999
Q ss_pred eeeEEEE---ecceEEEEcCCCChhhHHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEEEecCCcc-----chhh
Q 040169 241 SCKEVVI---LDNEMVILGGSGSQADIEKRCEQLRSAIKASTSDYEIKLLEERLLNLSCGALIVKVTGGST-----KNKR 312 (459)
Q Consensus 241 ~a~~v~i---~~~~~~~i~~~~~~~~i~~ri~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I~vgg~t~-----~~r~ 312 (459)
+|+.|++ ++++++|+++|+. ++++.+||++||+|+ .+|+
T Consensus 354 ~a~~v~~~~ig~~~~~~~~g~~~---------------------------------l~~~~~TIllrG~t~~~l~E~er~ 400 (568)
T 3p9d_H 354 LVETVKTMEIGGDRVTVFKQEQG---------------------------------EISRTSTIILRGATQNNLDDIERA 400 (568)
T ss_dssp ECSCCCCCEETTEECBCCCCCSS---------------------------------SCCSSCEEEEEESCHHHHHHHHHH
T ss_pred cceEEEEEEecCceEEEEecCCC---------------------------------CCCCeEEEEECCCcHHHHHHHHHH
Confidence 9999864 5689999998752 235689999999998 9999
Q ss_pred hhHHHHHHHHHHh--C-CcccCCCcccccCcccchhHHHHHHHHHHhhhhccccccchhhHHhhc-CCchhHHHHHHHHH
Q 040169 313 IVNALNAVKAAME--G-GIIPENSSQVCWQPFASFDLFVYFLSLAVIRVLMYPRARYYDLDKLQT-TSLGGKIGVQLLQQ 388 (459)
Q Consensus 313 i~DAl~~~k~a~~--~-gvVpGGG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~L~~~~~-~~~~e~~gi~~~a~ 388 (459)
+|||||++|++++ + ++|||||++| ++++ .+|++|+. .+|++|+|+++|++
T Consensus 401 i~DAL~vvr~av~~~d~~iVpGGGa~E-----------------------~~ls---~~L~~~a~~~~g~eq~~i~~fa~ 454 (568)
T 3p9d_H 401 IDDGVAAVKGLMKPSGGKLLPGAGATE-----------------------IELI---SRITKYGERTPGLLQLAIKQFAV 454 (568)
T ss_dssp HHHHHHHHHHTTSTTCCCCCCTTTHHH-----------------------HHHH---HHHHHHHHTCCSTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCCeEEeCCcHHH-----------------------HHHH---HHHHHHhccCCcHHHHHHHHHHH
Confidence 9999999999999 5 6999999999 9999 99999975 48999999999999
Q ss_pred HHhhHHHHHHHhcCCChHHHHHHHHhc-----------CCCCeeEecCCCc---cccccccCcccchHHHHHHHHHHHHH
Q 040169 389 ALKMPVCTIASATGVDGSAVAEKLLEQ-----------DNPDVGYDPARGE---YVDVIKLGIFDPMKLVIKELDDAIRL 454 (459)
Q Consensus 389 AL~~ip~~La~NaG~d~~~vl~kl~~~-----------~~~~~Gid~~~g~---~~d~~~~gI~DP~~vk~~al~~A~~~ 454 (459)
||+.||++||+|||+|+.+++.+|++. +++++|||+.+|+ |.||++.|||||+.||+++|++|+++
T Consensus 455 ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~ 534 (568)
T 3p9d_H 455 AFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEA 534 (568)
T ss_dssp GGGHHHHHHHHHHTCCHHHHHHHHHHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEEC
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHH
Confidence 999999999999999999999999985 2457999999998 99999999999999999999999999
Q ss_pred Hhhc
Q 040169 455 LVQT 458 (459)
Q Consensus 455 a~~~ 458 (459)
|+++
T Consensus 535 a~~i 538 (568)
T 3p9d_H 535 ATTV 538 (568)
T ss_dssp BCCC
T ss_pred HHHH
Confidence 9875
No 27
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.6e-40 Score=302.06 Aligned_cols=159 Identities=36% Similarity=0.611 Sum_probs=151.6
Q ss_pred eEEEEeEEEeccccccccccc-ccccc------------------------------CCCEEEEeccchhhHHHHHHHhh
Q 040169 143 LKFLRGMKLNWGAVSSFFIDD-ETQTC------------------------------KQPLFIIAEDVEVEVAGSLILDR 191 (459)
Q Consensus 143 ~~~v~G~~~~~g~~~~~~~~~-~~~~~------------------------------~~~l~ii~~~i~~~al~~l~~n~ 191 (459)
+++++||.||+||+||||+++ +++++ ++||+||++|++.+||++|+.||
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkKIs~i~~ilP~LE~~~~~~kpLlIIAedvegeaLatLvvNk 81 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDKISSLPDLLPLLEKVAGTGKPLLIVAEDVEGEALATLVVNA 81 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSEECCHHHHHHHHHHHHHHTCCEEEEESEECHHHHHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEecccccchhhhhhhhh
Confidence 568999999999999999999 88876 89999999999999999999999
Q ss_pred hcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccc---cccceeeeEEEEecceEEEEcCCCChhhHHHHH
Q 040169 192 ICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLA---RLKLGSCKEVVILDNEMVILGGSGSQADIEKRC 268 (459)
Q Consensus 192 ~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~---~~~LG~a~~v~i~~~~~~~i~~~~~~~~i~~ri 268 (459)
++|.+++||||+|+||++|+..|+|||.+|||++++.+.+++++ .++||+|++|.+++|++++++|.|++++|+.|+
T Consensus 82 lrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~T~iv~G~g~~~~I~~Rv 161 (194)
T 3m6c_A 82 IRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARRVVVSKDDTVIVDGGGTAEAVANRA 161 (194)
T ss_dssp HHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHH
T ss_pred ccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccEEEEcCCceEEecCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999988776654 789999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhhcCCeEEE
Q 040169 269 EQLRSAIKASTSDYEIKLLEERLLNLSCGALIV 301 (459)
Q Consensus 269 ~~l~~~i~~~~~~~~~~~l~eRl~~lsg~~~~I 301 (459)
++|+++++.++|+|||++|+|||++|+||+|+|
T Consensus 162 ~qIr~~ie~t~s~ydkEKLqERlAkLsGGVAVI 194 (194)
T 3m6c_A 162 KHLRAEIDKSDSDWDREKLGERLAKLAGGVAVI 194 (194)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHHHHHHHBCCC
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHcCCcEEC
Confidence 999999999999999999999999999998864
No 28
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=100.00 E-value=3.2e-38 Score=291.93 Aligned_cols=155 Identities=37% Similarity=0.573 Sum_probs=147.5
Q ss_pred EEeEEEeccccccccccc-ccccc------------------------------CCCEEEEeccchhhHHHHHHHhhhcc
Q 040169 146 LRGMKLNWGAVSSFFIDD-ETQTC------------------------------KQPLFIIAEDVEVEVAGSLILDRICV 194 (459)
Q Consensus 146 v~G~~~~~g~~~~~~~~~-~~~~~------------------------------~~~l~ii~~~i~~~al~~l~~n~~~~ 194 (459)
-+||.||+||+||||+++ +++++ ++||+||++||+.|||.+|+.|+++|
T Consensus 12 ~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNklrg 91 (201)
T 3osx_A 12 SEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNMRG 91 (201)
T ss_dssp CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHHHT
T ss_pred ccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhccc
Confidence 369999999999999999 88766 89999999999999999999999999
Q ss_pred cccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccc---cccceeeeEEEEecceEEEEcCCCChhhHHHHHHHH
Q 040169 195 STKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLA---RLKLGSCKEVVILDNEMVILGGSGSQADIEKRCEQL 271 (459)
Q Consensus 195 ~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~---~~~LG~a~~v~i~~~~~~~i~~~~~~~~i~~ri~~l 271 (459)
.+++||||+|+||++|+..|+|||.+|||++++.+.+++++ .++||+|++|.|++|++++++|.|++++|+.|+++|
T Consensus 92 ~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~vtkd~TtIv~G~G~~~~I~~Rv~qI 171 (201)
T 3osx_A 92 IVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVINKDTTTIIDGVGEEGAIAARVTQI 171 (201)
T ss_dssp SCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEECSSCEEEEEECCCHHHHHHHHHHH
T ss_pred eEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEEcCCceEEecCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999988776654 789999999999999999999999999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhhcCCeEE
Q 040169 272 RSAIKASTSDYEIKLLEERLLNLSCGALI 300 (459)
Q Consensus 272 ~~~i~~~~~~~~~~~l~eRl~~lsg~~~~ 300 (459)
+++|+.++|+|||++|+|||++|+||+|+
T Consensus 172 r~qie~t~S~ydkEKLqERLAKLsGGVAV 200 (201)
T 3osx_A 172 RQQIEESTSDYDREKLQERVAKLAGGVKL 200 (201)
T ss_dssp HHHHHTCCCHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcC
Confidence 99999999999999999999999999873
No 29
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=99.94 E-value=3.3e-27 Score=208.69 Aligned_cols=110 Identities=35% Similarity=0.582 Sum_probs=104.2
Q ss_pred eEEEeccccccccccc-ccccc------------------------------CCCEEEEeccchhhHHHHHHHhhhcccc
Q 040169 148 GMKLNWGAVSSFFIDD-ETQTC------------------------------KQPLFIIAEDVEVEVAGSLILDRICVST 196 (459)
Q Consensus 148 G~~~~~g~~~~~~~~~-~~~~~------------------------------~~~l~ii~~~i~~~al~~l~~n~~~~~~ 196 (459)
||.||+||+||||+++ +++++ ++||+||++|++.|||.+|+.||++|.+
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l 80 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTL 80 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSC
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccc
Confidence 8999999999999999 88776 8999999999999999999999999999
Q ss_pred cEEEecCCCccccccchHHHHHHHhCCeEeeeccccccc---cccceeeeEEEEecceEEEEcC
Q 040169 197 KFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLA---RLKLGSCKEVVILDNEMVILGG 257 (459)
Q Consensus 197 ~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~---~~~LG~a~~v~i~~~~~~~i~~ 257 (459)
++||||+|+||++||+.|+|||.+|||++++.+.+.+++ .++||+|++|.+++|++++++|
T Consensus 81 ~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~vtkd~TtIv~G 144 (145)
T 1srv_A 81 SVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRITKDETTIVGG 144 (145)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEECSSCEEEEEE
T ss_pred eEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEEcCCCeEEeCC
Confidence 999999999999999999999999999999988776665 7899999999999999999976
No 30
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=99.55 E-value=1.5e-14 Score=133.99 Aligned_cols=108 Identities=14% Similarity=0.128 Sum_probs=90.2
Q ss_pred eeEEEEeEEEeccccccccccc-ccccc-----------------------------------------------CCCEE
Q 040169 142 ELKFLRGMKLNWGAVSSFFIDD-ETQTC-----------------------------------------------KQPLF 173 (459)
Q Consensus 142 ~~~~v~G~~~~~g~~~~~~~~~-~~~~~-----------------------------------------------~~~l~ 173 (459)
++++++|++|++++.+|.|++. ++.++ +.+++
T Consensus 3 dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVV 82 (178)
T 1gml_A 3 DSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVV 82 (178)
T ss_dssp CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCSEE
T ss_pred CcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCcEE
Confidence 5789999999999999988876 66554 78899
Q ss_pred EEeccchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeecccccccccccee-eeEEE---Eec
Q 040169 174 IIAEDVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGS-CKEVV---ILD 249 (459)
Q Consensus 174 ii~~~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~-a~~v~---i~~ 249 (459)
++.++|++.+++.|..+. |.+++.. ++.+|++||++|||+++++.+. +++++||+ |+.|+ +++
T Consensus 83 l~~k~I~d~a~~~l~k~g------I~~vr~v-----~~~dleria~atGa~iv~~~~~--l~~~~LG~~~~~v~~~~ig~ 149 (178)
T 1gml_A 83 ITEKGISDLAQHYLMRAN------VTAIRRV-----RKTDNNRIARACGARIVSRPEE--LREDDVGTGAGLLEIKKIGD 149 (178)
T ss_dssp EESSCBCHHHHHHHHHTT------CEEECCC-----CHHHHHHHHHHHCCCEESCGGG--CCGGGSBCCEEEEEEEEETT
T ss_pred EECCcccHHHHHHHHHCC------CEEEecC-----CHHHHHHHHHHhCCeEeCChhh--CChhhhCCcccEEEEEEECC
Confidence 999999999999887654 4677654 4668999999999999998763 56889999 99987 578
Q ss_pred ceEEEEcCCCChh
Q 040169 250 NEMVILGGSGSQA 262 (459)
Q Consensus 250 ~~~~~i~~~~~~~ 262 (459)
+++++|+||+.++
T Consensus 150 ~~~~~~~gc~~~~ 162 (178)
T 1gml_A 150 EYFTFITDCKDPK 162 (178)
T ss_dssp EEEEEEEEESSTT
T ss_pred eEEEEEECCCCCC
Confidence 8999999987654
No 31
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.28 E-value=8.7e-12 Score=113.31 Aligned_cols=102 Identities=22% Similarity=0.236 Sum_probs=84.9
Q ss_pred EEeEEEeccccccccccc-ccccc-----------------------------------------------CCCEEEEec
Q 040169 146 LRGMKLNWGAVSSFFIDD-ETQTC-----------------------------------------------KQPLFIIAE 177 (459)
Q Consensus 146 v~G~~~~~g~~~~~~~~~-~~~~~-----------------------------------------------~~~l~ii~~ 177 (459)
++|++|++++.+|.|++. ++.++ +.+++++.+
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k 80 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQK 80 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESS
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECC
Confidence 479999999999888877 76655 788999999
Q ss_pred cchhhHHHHHHHhhhcccccEEEecCCCccccccchHHHHHHHhCCeEeeeccccccccccceeeeEEE---EecceEEE
Q 040169 178 DVEVEVAGSLILDRICVSTKFCLVKPPEFEENCKGIMQDLAVLTGGWVVTAESNSLLARLKLGSCKEVV---ILDNEMVI 254 (459)
Q Consensus 178 ~i~~~al~~l~~n~~~~~~~i~~vk~~~~~~~r~~~ledla~~tG~~v~~~~~~~~l~~~~LG~a~~v~---i~~~~~~~ 254 (459)
+|++.+++.|..+. |.+++.. ++.+|++||++|||+++++.+. +++++||+|+.|+ ++++++++
T Consensus 81 ~I~d~a~~~l~k~g------I~~v~~v-----~~~dleria~atGa~iv~~~~~--l~~~~LG~~~~v~e~~ig~~~~~~ 147 (159)
T 1ass_A 81 GIDDVAQHYLAKEG------IYAVRRV-----KKSDMEKLAKATGAKIVTDLDD--LTPSVLGEAETVEERKIGDDRMTF 147 (159)
T ss_dssp CBCHHHHHHHHHTT------CEEECSC-----CHHHHHHHHHHHTCCCBSSTTS--CCTTSCEEEEEEEEEEETTEEEEE
T ss_pred ccCHHHHHHHHHCC------CEEEccC-----CHHHHHHHHHHhCCeeeCcccc--CCcccCccceEEEEEEECCeEEEE
Confidence 99999999887654 4677654 5668999999999999998763 5688999999996 57899999
Q ss_pred EcCCCC
Q 040169 255 LGGSGS 260 (459)
Q Consensus 255 i~~~~~ 260 (459)
|++|++
T Consensus 148 ~~g~~~ 153 (159)
T 1ass_A 148 VMGCKN 153 (159)
T ss_dssp EESCC-
T ss_pred EECCCC
Confidence 999875
No 32
>2i15_A A05_ORF129, hypothetical protein Mg296 homolog; structural genomics, MPN423, hypothetical protien, all alpha structure, PSI; 2.40A {Mycoplasma pneumoniae} SCOP: a.291.1.1
Probab=47.84 E-value=33 Score=28.16 Aligned_cols=59 Identities=24% Similarity=0.245 Sum_probs=44.4
Q ss_pred HHHHHHHhhhhccccccchhhHHhhcCCchhHHHHHHHHHHHhhHHHHHHHhcCCChHHHHHHHH
Q 040169 349 YFLSLAVIRVLMYPRARYYDLDKLQTTSLGGKIGVQLLQQALKMPVCTIASATGVDGSAVAEKLL 413 (459)
Q Consensus 349 ~~~~~~~~~~~~~~s~~~~~L~~~~~~~~~e~~gi~~~a~AL~~ip~~La~NaG~d~~~vl~kl~ 413 (459)
.||+..|+++|=.++ ...+. -++..+-+.+-|-+||......||-.-|.|+...-.+|-
T Consensus 68 ffi~sevikqld~la---~~v~n---pk~~~~~ccq~fyeal~~fisalaitkgi~~~r~hq~l~ 126 (135)
T 2i15_A 68 FFISSEVVKQLDLLA---VLVDN---PKGDVKSCCQSFYEALTLFISALAITKGVDVGRYHQQLG 126 (135)
T ss_dssp HHHHHHHHCCCCC-------------CCCCHHHHHHHHHHHHHHHHHHHHHHTTCCTTHHHHHHH
T ss_pred hhhhHHHHHHHHHHH---HHHhC---CcchHHHHHHHHHHHHHHHHHHHHHHcCCCccHHHHHHH
Confidence 488889999987777 54433 367888999999999999999999999999977666553
No 33
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=24.01 E-value=1.5e+02 Score=28.28 Aligned_cols=46 Identities=13% Similarity=0.190 Sum_probs=30.0
Q ss_pred HHhhcCCeEEEEecCCcc-chhhhhHHHHHHHHHHhCC----cccCCCccc
Q 040169 291 LLNLSCGALIVKVTGGST-KNKRIVNALNAVKAAMEGG----IIPENSSQV 336 (459)
Q Consensus 291 l~~lsg~~~~I~vgg~t~-~~r~i~DAl~~~k~a~~~g----vVpGGG~~e 336 (459)
+.++.+...+|.+||+.- ....++.....+....+.| +|.|||..-
T Consensus 21 i~~~~~k~iVIKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vVlVhGgG~~i 71 (300)
T 2buf_A 21 IRRFVGKTLVIKYGGNAMESEELKAGFARDVVLMKAVGINPVVVHGGGPQI 71 (300)
T ss_dssp HHHHTTCEEEEEECCTTTTSSHHHHHHHHHHHHHHHTTCEEEEEECCCHHH
T ss_pred HHHhcCCeEEEEECchhhCCchHHHHHHHHHHHHHHCCCeEEEEECCcHHH
Confidence 345667788999999876 2334455555555444555 689998764
No 34
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=23.68 E-value=26 Score=37.07 Aligned_cols=36 Identities=19% Similarity=0.141 Sum_probs=6.8
Q ss_pred CCccCCCcHHHHHhhcc-cCCCCCcCCccc-c-----cchHHHHH
Q 040169 2 VPSRLSWSRNYAAKDIE-LKKSPKVKDCSV-I-----EESFLTGF 39 (459)
Q Consensus 2 ~~~~~t~d~~ti~~~i~-~~~p~~~~~~~~-i-----~en~~akl 39 (459)
|-++|.|-|-..+ |. =.-.|+|||||+ | ++||++++
T Consensus 26 vkttLGPkG~~km--l~~~~G~~~ITnDG~TIlk~i~v~hp~~n~ 68 (546)
T 3rtk_A 26 VKVTLGPKGRNVV--LEKKWGAPTITNDGVSIAKEIELEDPYEKI 68 (546)
T ss_dssp -------------------------------------CCCHHHHH
T ss_pred HHhccCCCCCeEE--EECCCCCeEEECcHHHHHHHccCCChhhhH
Confidence 5577888775443 11 113479999999 7 89999885
No 35
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=21.18 E-value=1.4e+02 Score=28.46 Aligned_cols=46 Identities=15% Similarity=0.182 Sum_probs=29.5
Q ss_pred HHhhcCCeEEEEecCCcc-chhhhhHHHHHHHHHHhCC----cccCCCccc
Q 040169 291 LLNLSCGALIVKVTGGST-KNKRIVNALNAVKAAMEGG----IIPENSSQV 336 (459)
Q Consensus 291 l~~lsg~~~~I~vgg~t~-~~r~i~DAl~~~k~a~~~g----vVpGGG~~e 336 (459)
+.++.+...+|.+||+.- ....+......+....+.| +|.|||.+-
T Consensus 20 i~~~~~k~iViKlGGs~l~~~~~~~~~~~~i~~l~~~G~~vViVhGgG~~i 70 (299)
T 2ap9_A 20 LKQLHGKVVVVKYGGNAMTDDTLRRAFAADMAFLRNCGIHPVVVHGGGPQI 70 (299)
T ss_dssp HHHHTTCEEEEEECTHHHHSHHHHHHHHHHHHHHHTTTCEEEEEECCSHHH
T ss_pred HHHhCCCeEEEEECchhhCCchHHHHHHHHHHHHHHCCCcEEEEECCcHHH
Confidence 345667788999999865 2334445555555544555 689988754
Done!