Query         040171
Match_columns 329
No_of_seqs    174 out of 1393
Neff          6.1 
Searched_HMMs 29240
Date          Mon Mar 25 08:54:14 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040171.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040171hhsearch_pdb -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 3hdl_A Royal PALM TREE peroxid 100.0  1E-105  5E-110  764.4  22.4  289   22-312     2-303 (304)
  2 1sch_A PNP, peanut peroxidase, 100.0  4E-104  1E-108  751.9  20.3  290   21-312     1-294 (294)
  3 1pa2_A Peroxidase, ATP A2; oxi 100.0  6E-103  2E-107  747.9  23.7  291   21-313     2-305 (306)
  4 1fhf_A SEED coat peroxidase; o 100.0  6E-103  2E-107  747.0  23.1  291   21-313     1-304 (304)
  5 1gwu_A Peroxidase C1A; oxidore 100.0  8E-103  3E-107  747.5  22.0  291   21-313     2-307 (309)
  6 1bgp_A Barley grain peroxidase 100.0  2E-101  8E-106  737.3  19.5  293   18-313     5-306 (309)
  7 1qgj_A Peroxidase N; oxidoredu 100.0  9E-101  3E-105  730.9  23.4  286   21-313     1-300 (300)
  8 1iyn_A Chloroplastic ascorbate 100.0 4.7E-74 1.6E-78  546.1  15.3  255   32-312     5-279 (295)
  9 1llp_A LIP4.15, lignin peroxid 100.0 6.5E-70 2.2E-74  525.8  12.8  237   19-316    21-293 (343)
 10 2e39_A Peroxidase; heme protei 100.0 1.6E-69 5.5E-74  523.5  13.9  237   19-316    30-301 (344)
 11 2cca_A Peroxidase/catalase T;  100.0 1.7E-69   6E-74  561.6   8.1  277   20-307    56-434 (740)
 12 3m5q_A Manganese peroxidase 1; 100.0 1.4E-67 4.9E-72  511.5  18.2  243   30-315    13-296 (357)
 13 3fmu_A VersatIle peroxidase VP 100.0 2.9E-67   1E-71  505.2  17.6  242   34-317    16-287 (331)
 14 2vcn_A Ascorbate peroxidase; I 100.0 1.6E-67 5.5E-72  492.9  14.6  224   36-298    28-260 (261)
 15 1ub2_A Catalase-peroxidase; KA 100.0 6.1E-69 2.1E-73  556.3   5.3  272   20-302    43-422 (720)
 16 1itk_A Catalase-peroxidase; he 100.0 5.4E-68 1.8E-72  549.9   7.6  272   20-302    44-419 (731)
 17 3q3u_A Lignin peroxidase; oxid 100.0 2.8E-66 9.5E-71  499.6  16.2  248   28-318    12-294 (338)
 18 3riv_A Ascorbate peroxidase; a 100.0   4E-66 1.4E-70  487.0  16.5  233   35-305     9-269 (271)
 19 3e2o_A CCP, cytochrome C perox 100.0 1.7E-62 5.8E-67  466.1  15.1  228   36-303    20-281 (294)
 20 3ut2_A Catalase-peroxidase 2;  100.0   8E-63 2.7E-67  511.2  10.5  273   20-302    67-449 (764)
 21 3n3r_A Catalase-peroxidase; E1 100.0 8.9E-63   3E-67  510.7   9.9  273   20-302    60-436 (748)
 22 3vli_A Catalase-peroxidase 2;  100.0 1.4E-62 4.8E-67  508.6   8.5  272   20-302    44-419 (737)
 23 1u2k_A Peroxidase/catalase HPI 100.0 5.4E-59 1.8E-63  445.0  12.7  220   36-297    30-306 (309)
 24 2cca_A Peroxidase/catalase T;  100.0 1.5E-55   5E-60  457.5  13.4  222   39-297   455-737 (740)
 25 1itk_A Catalase-peroxidase; he 100.0 1.3E-54 4.5E-59  449.9  13.9  224   36-296   443-727 (731)
 26 3rrw_A Thylakoid lumenal 29 kD 100.0 2.1E-54 7.2E-59  403.9  12.8  199   29-297     8-248 (268)
 27 1ub2_A Catalase-peroxidase; KA 100.0   1E-53 3.5E-58  442.7  14.8  215   40-297   446-717 (720)
 28 3vli_A Catalase-peroxidase 2;  100.0 7.7E-53 2.6E-57  435.9  13.6  222   40-298   447-729 (737)
 29 3n3r_A Catalase-peroxidase; E1 100.0 4.2E-51 1.4E-55  423.5  13.9  221   40-297   464-745 (748)
 30 3ut2_A Catalase-peroxidase 2;  100.0 3.9E-50 1.3E-54  416.5  14.1  220   40-297   477-758 (764)
 31 2yma_A YOS9P, protein OS-9 hom  57.3     7.1 0.00024   33.2   3.1   31  276-306    50-80  (161)
 32 2llv_A Heat shock protein STI1  21.6      76  0.0026   22.9   3.3   37  259-295    27-69  (71)

No 1  
>3hdl_A Royal PALM TREE peroxidase; glycosylated, oxidoreductase; HET: HEM MES NAG FUC MAN; 1.85A {Roystonea regia} SCOP: a.93.1.0
Probab=100.00  E-value=1.4e-105  Score=764.39  Aligned_cols=289  Identities=43%  Similarity=0.729  Sum_probs=279.8

Q ss_pred             CCccccccCCccHHHHHHHHHHHHHhhCCCcHHHHHHHHhhcccCCCCCCcceeccCCCCCCCCCCCCCCC-CCchhHHH
Q 040171           22 LTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQPEKDSGSNL-TVRGYEII  100 (329)
Q Consensus        22 L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~~GcDgSill~~~~~~~~E~~~~~N~-~L~g~~~I  100 (329)
                      |+++||++|||++|+||+++|++++.+||+++|+|||||||||||+ ||||||||++++++.+|+++++|. +|+||++|
T Consensus         2 L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDCfv~-GCDgSiLld~t~~~~~Ek~~~~N~~~lrgf~vi   80 (304)
T 3hdl_A            2 LQIGFYNTSCPTAESLVQQAVAAAFANNSGIAPGLIRMHFHDCFVR-GCDASVLLDSTANNTAEKDAIPNNPSLRGFEVI   80 (304)
T ss_dssp             CEETTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTT-SSSSGGGCCCBTTBCCGGGSTTTTTTCCCHHHH
T ss_pred             CccChhhCcCcCHHHHHHHHHHHHHHhCCcchHHHHHHheecccCC-CCCeeeeecCCCCCcccccCCCcccchHHHHHH
Confidence            7899999999999999999999999999999999999999999999 999999999998888999999999 89999999


Q ss_pred             HHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHcCCCcc
Q 040171          101 DEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEV--NLPGTSLSVPNVLQMFAEKGFNTT  178 (329)
Q Consensus       101 d~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~--~LP~p~~~~~~l~~~F~~~Gls~~  178 (329)
                      |.||++||+.||++||||||||||||+||+++|||.|+|++||+|++++....+  +||+|+.++++|++.|++|||+++
T Consensus        81 d~iK~~le~~Cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  160 (304)
T 3hdl_A           81 TAAKSAVEAACPQTVSCADILAFAARDSANLAGNITYQVPSGRRDGTVSLASEANAQIPSPLFNATQLINSFANKTLTAD  160 (304)
T ss_dssp             HHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHHHCCCCCCEECCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCHH
T ss_pred             HHHHHHHHhhCCCCccHHHHHHHHHhhhhhccCCCccccccCccCCCCCCccccccCCCCCCCCHHHHHHHHHHcCCCHH
Confidence            999999999999999999999999999999999999999999999999988765  799999999999999999999999


Q ss_pred             cceeecccceeccccccccCCcC--------CCCCCCHHHHHHHHhhCCCCCC--CCCCCCCCCCCCCcccChHHHHHhh
Q 040171          179 ETVVILGAHTVGVVHCSFFQDRL--------ADSDMDPAFAQELSKACEASSG--SDDPMTNLDRGTPTSLDSQYYNQTL  248 (329)
Q Consensus       179 dlVaLsGaHTiG~~hc~~f~~Rl--------~dp~~d~~~~~~L~~~Cp~~~~--~~~~~~~lD~~tp~~FDN~Yy~~l~  248 (329)
                      ||||||||||||++||.+|.+||        +||+||+.|++.|++.||..++  +. +.++||+.||.+|||+||++|+
T Consensus       161 d~VaLsGaHTiG~ahC~~f~~Rly~f~~~~~~DP~ld~~~a~~L~~~Cp~~~~~~~~-~~~~lD~~TP~~FDN~Yy~nL~  239 (304)
T 3hdl_A          161 EMVTLSGAHSIGVAHCSSFTNRLYNFNSGSGIDPTLSPSYAALLRNTCPANSTRFTP-ITVSLDIITPSVLDNMYYTGVQ  239 (304)
T ss_dssp             HHHHHGGGGGSSEEEGGGTGGGTSSCSSSSSSCTTSCHHHHHHHHHHSCTTCCTTSC-CEEESCSSSTTSCSTHHHHHHH
T ss_pred             HhhhhhccccccccccchhhhhhcccCCCCCCCCcccHHHHHHHhccCCCCCCCCCc-cccCCCCCCcccccHHHHHHHH
Confidence            99999999999999999999999        4999999999999999997654  33 5678999999999999999999


Q ss_pred             hcccCccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCccccccccccc
Q 040171          249 FKRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFN  312 (329)
Q Consensus       249 ~~~gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  312 (329)
                      .++|||+|||+|+.|++|+++|++||.||+.|+++|++||+||++|+|+||.+||||++|+.+|
T Consensus       240 ~~~glL~SDq~L~~d~~t~~~V~~yA~~~~~F~~~Fa~AmvKmg~igv~tg~~GeIR~~C~~~N  303 (304)
T 3hdl_A          240 LTLGLLTSDQALVTEANLSAAVKANAMNLTAWASKFAQAMVKMGQIEVLTGTQGEIRTNCSVVN  303 (304)
T ss_dssp             TTCCCSHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCC
T ss_pred             hCcCCCCCCHHHhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHhcCCCCCCCCeeeCCccccC
Confidence            9999999999999999999999999999999999999999999999999999999999999999


No 2  
>1sch_A PNP, peanut peroxidase, major cationic isozyme; calcium binding, glycosylation, oxidoreductase; HET: NAG HEM; 2.56A {Arachis hypogaea} SCOP: a.93.1.1
Probab=100.00  E-value=3.8e-104  Score=751.90  Aligned_cols=290  Identities=39%  Similarity=0.728  Sum_probs=281.6

Q ss_pred             CCCccccccCCccHHHHHHHHHHHHHhhCCCcHHHHHHHHhhcccCCCCCCcceeccCCCCCCCCCCCCCCC-CCchhHH
Q 040171           21 KLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQPEKDSGSNL-TVRGYEI   99 (329)
Q Consensus        21 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~~GcDgSill~~~~~~~~E~~~~~N~-~L~g~~~   99 (329)
                      ||+++||++|||++|+|||++|++++.+|++++|+||||+||||||+ ||||||||++++++.+|+++++|. +|+||++
T Consensus         1 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~-GcDgSill~~t~~~~~E~~~~~N~~~lrgf~v   79 (294)
T 1sch_A            1 ELSSNFYATKCPNALSTIKSAVNSAVAKEARMGASLLRLHFHDCFVQ-GCDASVLLDDTSNFTGEKTAGPNANSIRGFEV   79 (294)
T ss_dssp             CCBTTTTTTTCTTHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHTTT-SSSSGGGCCCBTTBCCSTTSTTTTTTCCCHHH
T ss_pred             CCCCccccCcCcCHHHHHHHHHHHHHHhCCCCCccccceeheecCCC-CCCceeeccCCCCCcccccCcccccccchHHH
Confidence            58999999999999999999999999999999999999999999999 999999999988888999999998 9999999


Q ss_pred             HHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHcCCCc
Q 040171          100 IDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEV--NLPGTSLSVPNVLQMFAEKGFNT  177 (329)
Q Consensus       100 Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~--~LP~p~~~~~~l~~~F~~~Gls~  177 (329)
                      |+.||++||+.||++|||||||+||||+||+++|||.|+|++||+|++++.+..+  +||+|+.++++|++.|++|||++
T Consensus        80 id~iK~~le~~cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  159 (294)
T 1sch_A           80 IDTIKSQVESLCPGVVSCADILAVAARDSVVALGGASWNVLLGRRDSTTASLSSANSDLPAPFFNLSGLISAFSNKGFTT  159 (294)
T ss_dssp             HHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHTTCCCCCCCBCCBBCSCCCHHHHHHHSCCTTCCHHHHHHHHHTTTCCH
T ss_pred             HHHHHHHHHhhCCCcccHHHHHHHHhhhhhhhccCCcccccCCCCCCccccccccccCCCCccCCHHHHHHHHHHcCCCH
Confidence            9999999999999999999999999999999999999999999999999988765  79999999999999999999999


Q ss_pred             ccceeecccceeccccccccCCcC-CCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHHHhhhcccCccc
Q 040171          178 TETVVILGAHTVGVVHCSFFQDRL-ADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLFKRGVLQI  256 (329)
Q Consensus       178 ~dlVaLsGaHTiG~~hc~~f~~Rl-~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~~gll~S  256 (329)
                      +||||||||||||++||.+|.+|| .||+|++.|++.|++.||.++.++ +|++||+.||.+|||+||++|+.++|+|+|
T Consensus       160 ~d~VaLsGaHTiG~ahc~~f~~Rly~dp~~~~~~~~~L~~~Cp~~g~~~-~~~~lD~~tp~~FDn~Yy~~l~~~~gll~S  238 (294)
T 1sch_A          160 KELVTLSGAHTIGQAQCTAFRTRIYNESNIDPTYAKSLQANCPSVGGDT-NLSPFDVTTPNKFDNAYYINLRNKKGLLHS  238 (294)
T ss_dssp             HHHHHHHGGGGBCEEEHHHHHHHHHHCSSSCHHHHHHHHTTSCSSSCTT-CEEESCSSSTBSCSTHHHHHHHTTCCSSHH
T ss_pred             HHhccccccceeceeccccccccccCCcccCHHHHHHHhccCCCCCCCC-ccccCCccccccccHHHHHHHHcCCcccHH
Confidence            999999999999999999999999 699999999999999999765555 789999999999999999999999999999


Q ss_pred             hhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCccccccccccc
Q 040171          257 DQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFN  312 (329)
Q Consensus       257 D~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  312 (329)
                      |++|+.|++|+++|+.||.||+.|+++|++||+||++|+|+||++||||++|+.+|
T Consensus       239 D~~L~~d~~t~~~v~~ya~~~~~F~~~Fa~Am~Km~~lgv~tg~~GeIR~~C~~~N  294 (294)
T 1sch_A          239 DQQLFNGVSTDSQVTAYSNNAATFNTDFGNAMIKMGNLSPLTGTSGQIRTNCRKTN  294 (294)
T ss_dssp             HHHTSSSSTTHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCBCTTSSBCCSSTTSCC
T ss_pred             HHHHHcCccHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccccCcCCC
Confidence            99999999999999999999999999999999999999999999999999999998


No 3  
>1pa2_A Peroxidase, ATP A2; oxidoreductase; HET: HEM; 1.45A {Arabidopsis thaliana} SCOP: a.93.1.1 PDB: 1qo4_A*
Probab=100.00  E-value=5.7e-103  Score=747.86  Aligned_cols=291  Identities=38%  Similarity=0.716  Sum_probs=280.3

Q ss_pred             CCCccccccCCccHHHHHHHHHHHHHhhCCCcHHHHHHHHhhcccCCCCCCcceeccCCCCCCCCCCCCCCC-CCchhHH
Q 040171           21 KLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQPEKDSGSNL-TVRGYEI   99 (329)
Q Consensus        21 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~~GcDgSill~~~~~~~~E~~~~~N~-~L~g~~~   99 (329)
                      ||+++||++|||++|+||+++|++++.+|++++|+||||+||||||+ ||||||||++++++.+|+++++|. +++||++
T Consensus         2 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~-GcDgSilld~t~~~~~E~~~~~N~~~lrgf~v   80 (306)
T 1pa2_A            2 QLNATFYSGTCPNASAIVRSTIQQALQSDTRIGASLIRLHFHDCFVN-GCDASILLDDTGSIQSEKNAGPNVNSARGFNV   80 (306)
T ss_dssp             CCBTTTTTTTCTTHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHTTT-SSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHH
T ss_pred             CCCCccccCcCcCHHHHHHHHHHHHHHhCCccchhhhhhhhhhcccc-CCCcceeecCCCCccccccCccccccchhHHH
Confidence            69999999999999999999999999999999999999999999999 999999999988888999999996 8899999


Q ss_pred             HHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHcCCCc
Q 040171          100 IDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEV--NLPGTSLSVPNVLQMFAEKGFNT  177 (329)
Q Consensus       100 Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~--~LP~p~~~~~~l~~~F~~~Gls~  177 (329)
                      |+.||++||+.||++|||||||+||||+||+++|||.|+|++||+|++++....+  +||+|+.++++|++.|++|||++
T Consensus        81 id~iK~~le~~cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  160 (306)
T 1pa2_A           81 VDNIKTALENACPGVVSCSDVLALASEASVSLAGGPSWTVLLGRRDSLTANLAGANSSIPSPIESLSNITFKFSAVGLNT  160 (306)
T ss_dssp             HHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHTTCCCCCCCBCCBBCSCCCHHHHHHHSCCTTSCHHHHHHHHHHHTCCH
T ss_pred             HHHHHHHHHhhCCCCcCHHHHHHHHHHHHHHhcCCCcccCCCCCCCCCCccccccccCCCCCCCCHHHHHHHHHHcCCCH
Confidence            9999999999999999999999999999999999999999999999999987655  79999999999999999999999


Q ss_pred             ccceeecccceeccccccccCCcC--------CCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHHHhhh
Q 040171          178 TETVVILGAHTVGVVHCSFFQDRL--------ADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLF  249 (329)
Q Consensus       178 ~dlVaLsGaHTiG~~hc~~f~~Rl--------~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~  249 (329)
                      +||||||||||||++||.+|.+||        +||+|++.|++.|++.||..++++ ++++||+.||.+|||+||++|+.
T Consensus       161 ~d~VaLsGaHTiG~ahc~~f~~Rlynf~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~-~~~~~D~~tp~~FDn~Yy~~l~~  239 (306)
T 1pa2_A          161 NDLVALSGAHTFGRARCGVFNNRLFNFSGTGNPDPTLNSTLLSTLQQLCPQNGSAS-TITNLDLSTPDAFDNNYFANLQS  239 (306)
T ss_dssp             HHHHHHHGGGGSSEEEGGGTGGGTSSGGGSSSCCTTSCHHHHHHHHHHSCTTSCTT-CEEESCSSSSSSCSTHHHHHHHT
T ss_pred             HHheeeccceEeeeeccccccccccccCCCCCCCcccCHHHHHHHHhhCCCCCCCC-ccccCCCCCCCccchHHhhcccc
Confidence            999999999999999999999997        489999999999999999765444 67889999999999999999999


Q ss_pred             cccCccchhhhcc-Ccc-hHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCcccccccccccC
Q 040171          250 KRGVLQIDQALAL-DAS-THDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFNR  313 (329)
Q Consensus       250 ~~gll~SD~~L~~-d~~-t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n~  313 (329)
                      ++|+|+|||+|+. |++ |+++|+.||.||+.|+++|++||+||++|+|+||.+||||++|+.+|+
T Consensus       240 ~~gll~SD~~L~~~d~~~t~~~V~~ya~~~~~F~~~Fa~Am~Km~~l~v~tg~~GeIR~~C~~~N~  305 (306)
T 1pa2_A          240 NDGLLQSDQELFSTTGSSTIAIVTSFASNQTLFFQAFAQSMINMGNISPLTGSNGEIRLDCKKVNG  305 (306)
T ss_dssp             TCCSSHHHHHHHHSTTCTHHHHHHHHHHCHHHHHHHHHHHHHHHHTSSCBCTTSSBCCSSTTSCTT
T ss_pred             CceeehhhHHHHcCChHHHHHHHHHhcCCHHHHHHHHHHHHHHHhcCCCCCCCCCeeeCccCCcCC
Confidence            9999999999999 999 999999999999999999999999999999999999999999999994


No 4  
>1fhf_A SEED coat peroxidase; oxidoreductase; HET: HEM; 2.80A {Glycine max} SCOP: a.93.1.1
Probab=100.00  E-value=6.1e-103  Score=747.04  Aligned_cols=291  Identities=39%  Similarity=0.701  Sum_probs=280.5

Q ss_pred             CCCccccccCCccHHHHHHHHHHHHHhhCCCcHHHHHHHHhhcccCCCCCCcceeccCCCCCCCCCCCCCCC-CCchhHH
Q 040171           21 KLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQPEKDSGSNL-TVRGYEI   99 (329)
Q Consensus        21 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~~GcDgSill~~~~~~~~E~~~~~N~-~L~g~~~   99 (329)
                      ||+++||++|||++|+|||++|++++.+|++++|+||||+||||||+ ||||||||++++++.+|+++++|. +++||++
T Consensus         1 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~-GcDgSilld~t~~~~~E~~~~~N~~~~rgf~v   79 (304)
T 1fhf_A            1 QLTPTFYRETCPNLFPIVFGVIFDASFTDPRIGASLMRLHFHDCFVQ-GCDGSVLLNNTDTIESEQDALPNINSIRGLDV   79 (304)
T ss_dssp             CCBTTTTTTTSTTHHHHHHHHHHHTTSSCTTHHHHHHHHHHHHHTTT-CSSSGGGCCCCSSCCCGGGSTTTTTTCCCHHH
T ss_pred             CCCCccccCcCcCHHHHHHHHHHHHHHhCCcchhhhhhheeeecccC-CCCceEEecCCCCCcccccCccccccchhHHH
Confidence            58999999999999999999999999999999999999999999999 999999999988888999999998 7899999


Q ss_pred             HHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHcCCCc
Q 040171          100 IDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEV--NLPGTSLSVPNVLQMFAEKGFNT  177 (329)
Q Consensus       100 Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~--~LP~p~~~~~~l~~~F~~~Gls~  177 (329)
                      |+.||++||+.||++|||||||+||||+||+++|||.|+|++||+|++++...++  +||+|+.++++|++.|++|||++
T Consensus        80 id~iK~~le~~cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  159 (304)
T 1fhf_A           80 VNDIKTAVENSCPDTVSCADILAIAAEIASVLGGGPGWPVPLGRRDSLTANRTLANQNLPAPFFNLTQLKASFAVQGLNT  159 (304)
T ss_dssp             HHHHHHHHHTTSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSCCCHHHHHHHSCCTTCCHHHHHHHHHHTTCCH
T ss_pred             HHHHHHHHHHhCCCcccHHHHHHHHHHHHHHhcCCCccCCcCCCCCCcccccccccccCCCCCCCHHHHHHHHHHcCCCH
Confidence            9999999999999999999999999999999999999999999999999987665  79999999999999999999999


Q ss_pred             ccceeecccceeccccccccCCcC--------CCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHHHhhh
Q 040171          178 TETVVILGAHTVGVVHCSFFQDRL--------ADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLF  249 (329)
Q Consensus       178 ~dlVaLsGaHTiG~~hc~~f~~Rl--------~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~  249 (329)
                      +||||||||||||++||.+|.+||        +||+|++.|++.|++.||..+++. ++++||+.||.+|||+||++|++
T Consensus       160 ~d~VaLsGaHTiG~ahc~~f~~Rlynf~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~-~~~~lD~~tp~~FDn~Yy~~l~~  238 (304)
T 1fhf_A          160 LDLVTLSGGHTFGRARCSTFINRLYNFSNTGNPDPTLNTTYLEVLRARCPQNATGD-NLTNLDLSTPDQFDNRYYSNLLQ  238 (304)
T ss_dssp             HHHHHHGGGGGSCEEEGGGTGGGTSCGGGSSSCCTTSCHHHHHHHHHHSCSSCSSC-CEEESCSSSTTSCSTHHHHHHHT
T ss_pred             HHhhhhcccceeceecccccccccccCCCCCCCCCCcCHHHHHHhhccCCCCCCCC-ccccCCcccccccchhhhhhhcc
Confidence            999999999999999999999998        489999999999999999755444 67889999999999999999999


Q ss_pred             cccCccchhhhcc-Ccc-hHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCcccccccccccC
Q 040171          250 KRGVLQIDQALAL-DAS-THDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFNR  313 (329)
Q Consensus       250 ~~gll~SD~~L~~-d~~-t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n~  313 (329)
                      ++|+|+|||+|+. |++ |+++|+.||.||+.|+++|++||+||++|+|+||.+||||++|+.+|+
T Consensus       239 ~~gll~SD~~L~~~d~~~t~~~v~~ya~~~~~F~~~Fa~Am~Km~~igv~tg~~GeIR~~C~~~N~  304 (304)
T 1fhf_A          239 LNGLLQSDQELFSTPGADTIPIVNSFSSNQNTFFSNFRVSMIKMGNIGVLTGDEGEIRLQCNFVNG  304 (304)
T ss_dssp             TCCSSHHHHTTTSSTTCSSHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCCTTSSBCCSBTTBCCC
T ss_pred             CceeehHhHHHhcCChHHHHHHHHHHhhCHHHHHHHHHHHHHHHhcCCCCCCCCCcccCcccCcCC
Confidence            9999999999999 999 999999999999999999999999999999999999999999999993


No 5  
>1gwu_A Peroxidase C1A; oxidoreductase, glycoprotein, heme, multigene family, signal,; HET: HEM; 1.31A {Armoracia rusticana} SCOP: a.93.1.1 PDB: 1w4w_A* 1w4y_A* 1gwo_A* 2atj_A* 1gwt_A* 3atj_A* 1gx2_A* 7atj_A* 1h55_A* 1h58_A* 1h5a_A* 1h5c_A* 1h5d_A* 1h5e_A* 1h5f_A* 1h57_A* 1h5h_A* 1h5i_A* 1h5j_A* 1h5k_A* ...
Probab=100.00  E-value=7.7e-103  Score=747.49  Aligned_cols=291  Identities=38%  Similarity=0.718  Sum_probs=279.7

Q ss_pred             CCCccccccCCccHHHHHHHHHHHHHhhCCCcHHHHHHHHhhcccCCCCCCcceeccCCCCCCCCCCCCCCC-CCchhHH
Q 040171           21 KLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQPEKDSGSNL-TVRGYEI   99 (329)
Q Consensus        21 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~~GcDgSill~~~~~~~~E~~~~~N~-~L~g~~~   99 (329)
                      ||+++||++|||++|+||+++|++++.+|++++|+||||+||||||+ ||||||||++++++.+|+++++|. +++||++
T Consensus         2 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~-GCDgSilld~t~~~~~E~~~~~N~~~~rgf~v   80 (309)
T 1gwu_A            2 QLTPTFYDNSCPNVSNIVRDTIVNELRSDPRIAASILRLHFHDCFVN-GCDASILLDNTTSFRTEKDAFGNANSARGFPV   80 (309)
T ss_dssp             CCBTTTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTT-SSSSGGGCCCCSSSCCGGGSTTTTTTCCCHHH
T ss_pred             CCccchhhCcCcCHHHHHHHHHHHHHHhCCccccchhheehhhhccC-CCCceEEecCCCCccccccCccccccchhHHH
Confidence            69999999999999999999999999999999999999999999999 999999999988888999999997 8899999


Q ss_pred             HHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHcCCC-
Q 040171          100 IDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEV--NLPGTSLSVPNVLQMFAEKGFN-  176 (329)
Q Consensus       100 Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~--~LP~p~~~~~~l~~~F~~~Gls-  176 (329)
                      |+.||++||+.||++||||||||||||+||+++|||.|+|++||+|++++....+  +||+|+.++++|++.|++|||+ 
T Consensus        81 id~iK~~le~~cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~  160 (309)
T 1gwu_A           81 IDRMKAAVESACPRTVSCADLLTIAAQQSVTLAGGPSWRVPLGRRDSLQAFLDLANANLPGPFFTLPQLKDSFRNVGLNR  160 (309)
T ss_dssp             HHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHHTTCCCCCCCBCCBBCSSCCHHHHHHHSCCTTCCHHHHHHHHHHHTCCC
T ss_pred             HHHHHHHHHhhCCCcccHHHHHHHHHHHHHHhcCCCccCCcCCCCCCCCCcccccccCCCCCccCHHHHHHHHHHcCCCc
Confidence            9999999999999999999999999999999999999999999999999887655  7999999999999999999999 


Q ss_pred             cccceeecccceeccccccccCCcC--------CCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHHHhh
Q 040171          177 TTETVVILGAHTVGVVHCSFFQDRL--------ADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTL  248 (329)
Q Consensus       177 ~~dlVaLsGaHTiG~~hc~~f~~Rl--------~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~  248 (329)
                      ++||||||||||||++||.+|.+||        +||+|++.|++.|++.||..+++. ++++||+.||.+|||+||++|+
T Consensus       161 ~~d~VaLsGaHTiG~ahc~~f~~Rlynf~g~~~~Dp~~~~~~~~~L~~~Cp~~g~~~-~~~~~D~~tp~~FDn~Yy~~l~  239 (309)
T 1gwu_A          161 SSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGLCPLNGNLS-ALVDFDLRTPTIFDNKYYVNLE  239 (309)
T ss_dssp             HHHHHHHHGGGGSCEEEGGGGHHHHHCGGGSSSCCTTSCHHHHHHHHHHSCTTSCTT-CEEESCSSCTTCCSTHHHHHHH
T ss_pred             hhhheeeeccceeeeccccccccccccCCCCCCCCccccHHHHHHHHhhCCCCCCCc-ccccCCCCCCccccHHHHhhhh
Confidence            9999999999999999999999997        499999999999999999765444 6788999999999999999999


Q ss_pred             hcccCccchhhhcc-Ccc--hHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCcccccccccccC
Q 040171          249 FKRGVLQIDQALAL-DAS--THDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFNR  313 (329)
Q Consensus       249 ~~~gll~SD~~L~~-d~~--t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n~  313 (329)
                      .++|+|+|||+|+. |++  |+++|+.||.||+.||++|++||+||++|+|+||.+||||++|+.+|+
T Consensus       240 ~~~gll~SD~~L~~~d~~~~t~~~V~~ya~~~~~F~~~Fa~Am~Km~~igv~tg~~GeIR~~C~~~N~  307 (309)
T 1gwu_A          240 EQKGLIQSDQELFSSPNATDTIPLVRSFANSTQTFFNAFVEAMDRMGNITPLTGTQGQIRLNCRVVNS  307 (309)
T ss_dssp             TTCCSSHHHHHHHHSTTTTTHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCBCTTSSBCCSSTTSCC-
T ss_pred             ccccchhhhhhhhcCCCchhHHHHHHHhcCCHHHHHHHHHHHHHHHHcCCCCCCCCCeecCcccCcCC
Confidence            99999999999999 999  999999999999999999999999999999999999999999999995


No 6  
>1bgp_A Barley grain peroxidase; chromoprotein, oxidoreductase; HET: HEM; 1.90A {Hordeum vulgare} SCOP: a.93.1.1
Probab=100.00  E-value=2.3e-101  Score=737.33  Aligned_cols=293  Identities=38%  Similarity=0.709  Sum_probs=279.9

Q ss_pred             hccCCCccccccCCccHHHHHHHHHHHHHhhCCCcHHHHHHHHhhcccCCCCCCcceeccCCCCCCCCCCCCCCC--CCc
Q 040171           18 ALAKLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQPEKDSGSNL--TVR   95 (329)
Q Consensus        18 ~~~~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~~GcDgSill~~~~~~~~E~~~~~N~--~L~   95 (329)
                      ..+||+++||++|||++|+||+++|++++.+|++++|+||||+||||||+ ||||||||++++++.+|+++++|.  +++
T Consensus         5 ~~~~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~-GcDgSilld~t~~~~~E~~~~~N~~ls~r   83 (309)
T 1bgp_A            5 VAPGLSFDFYWQTCPRAESIVREFVQEAVRKDIGLAAGLLRLHFHDCFVQ-GCDASVLLDGSATGPGEQQAPPNLTLRPS   83 (309)
T ss_dssp             CCTTCBTTTTTTTCTTHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHTT-SSSSGGGSTTSTTSTTCCSSCGGGCCCHH
T ss_pred             cccCccCChhhCcCcCHHHHHHHHHHHHHHhCCCccccccceEeeecccC-CCCeeEEecCCCCCcccccCcccccccch
Confidence            34689999999999999999999999999999999999999999999999 999999999988888999999997  468


Q ss_pred             hhHHHHHHHHHHhhhC-CCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCC-CCCCCCCC--CCCCCCCCHHHHHHHHH
Q 040171           96 GYEIIDEIKNAVEQKC-PSTVSCADIIALATRDAVALAGGLNYSLPTGRLDG-LRSNADEV--NLPGTSLSVPNVLQMFA  171 (329)
Q Consensus        96 g~~~Id~iK~~le~~c-p~~VScADilalAar~av~~~GGP~~~v~~GR~D~-~~s~~~~~--~LP~p~~~~~~l~~~F~  171 (329)
                      ||++|+.||++||+.| |++|||||||+||||+||+++|||.|+|++||+|+ +++...++  +||+|+.++++|++.|+
T Consensus        84 g~~vi~~iK~~le~~c~p~~VScADilalAardav~~~GGP~~~v~~GR~D~~~~s~~~~~~~~lP~p~~~~~~l~~~F~  163 (309)
T 1bgp_A           84 AFKAVNDIRDRLERECRGAVVSCSDILALAARDSVVVSGGPDYRVPLGRRDSRSFASTQDVLSDLPGPSSNVQSLLALLG  163 (309)
T ss_dssp             HHHHHHHHHHHHHHHHTSSCSCHHHHHHHHHHHHHHHTTCCCCCCCBCEEBCCSCCCHHHHHHHSCCTTCCHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhccCCCcccHHHHHHHHHHHHHHhcCCCeecccCCCcCCcCCCCccccccCCCCCCCCHHHHHHHHH
Confidence            9999999999999999 99999999999999999999999999999999999 98876555  79999999999999999


Q ss_pred             HcCCCcccceeecccceeccccccccCCcC---CCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHHHhh
Q 040171          172 EKGFNTTETVVILGAHTVGVVHCSFFQDRL---ADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTL  248 (329)
Q Consensus       172 ~~Gls~~dlVaLsGaHTiG~~hc~~f~~Rl---~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~  248 (329)
                      +||||++||||||||||||++||.+|.+|+   +||+|++.|++.|++.||..+ .. ++++||..||.+|||+||++|+
T Consensus       164 ~~Gl~~~d~VaLsGaHTiG~ahc~~f~~Rlyn~~dp~~~~~~~~~L~~~Cp~~~-~~-~~~~~D~~tP~~FDn~Yy~~L~  241 (309)
T 1bgp_A          164 RLGLDATDLVTISGGHTIGLAHCSSFEDRLFPRPDPTISPTFLSRLKRTCPAKG-TD-RRTVLDVRTPNVFDNKYYIDLV  241 (309)
T ss_dssp             HTTCCHHHHHHHGGGGGSCEEEGGGTGGGTSSSCCTTSCHHHHHHHHHHCSSTT-CC-CEEESCSSCTTSCSTHHHHHHH
T ss_pred             HcCCCHHHhhhhhccceeeecccccccccccCCCCCccCHHHHHHHHhhCCCCC-CC-cccccCccccccccchhhhhcc
Confidence            999999999999999999999999999999   499999999999999999753 23 5778998899999999999999


Q ss_pred             hcccCccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCcccccccccccC
Q 040171          249 FKRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFNR  313 (329)
Q Consensus       249 ~~~gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n~  313 (329)
                      .++|+|+||++|+.|++|+++|+.||.|++.|+++|++||+||++|+|+||.+||||++|+.+|+
T Consensus       242 ~~~gll~SD~~L~~d~~t~~~v~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeIR~~C~~~N~  306 (309)
T 1bgp_A          242 NREGLFVSDQDLFTNAITRPIVERFAQSQQDFFEQFGVSIGKMGQMRVRTSDQGEVRRNCSVRNP  306 (309)
T ss_dssp             TTCCSSHHHHHHHHSTTTHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCEEGGGCBCCSSTTSCCC
T ss_pred             cCccccHHhHHHhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHhcCCCCCCCCCeeeCccCccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999994


No 7  
>1qgj_A Peroxidase N; oxidoreductase; HET: HEM GSH; 1.90A {Arabidopsis thaliana} SCOP: a.93.1.1
Probab=100.00  E-value=8.9e-101  Score=730.94  Aligned_cols=286  Identities=36%  Similarity=0.701  Sum_probs=275.0

Q ss_pred             CCCccccccCCccHHHHHHHHHHHHHhhCCCcHHHHHHHHhhcccCCCCCCcceeccCCCCCCCCCCCCCCC-CCchhHH
Q 040171           21 KLTPNFYSSSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIRSQPEKDSGSNL-TVRGYEI   99 (329)
Q Consensus        21 ~L~~~fY~~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~~GcDgSill~~~~~~~~E~~~~~N~-~L~g~~~   99 (329)
                      ||+++||++|||++|+|||++|++++.+|++++|+||||+||||||+ ||||||||+++   .+|+++++|. +++||++
T Consensus         1 ~L~~~fY~~sCP~~e~iVr~~v~~~~~~d~~~aa~llRL~FHDcfv~-GcDgSill~~~---~~E~~~~~N~~~lrgf~v   76 (300)
T 1qgj_A            1 QLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVN-GCDASLLLDGA---DSEKLAIPNINSARGFEV   76 (300)
T ss_dssp             CCBTTTTTTTCTTHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTT-BSSSGGGCCST---TCGGGSTTTTTTCCCHHH
T ss_pred             CCccchhcCcCcCHHHHHHHHHHHHHHhCCCCCccchheeeeecccC-CCCceEeecCC---chhhcCcccccccchHHH
Confidence            58999999999999999999999999999999999999999999999 99999999976   4899999998 8899999


Q ss_pred             HHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHcCCCcc
Q 040171          100 IDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEV-NLPGTSLSVPNVLQMFAEKGFNTT  178 (329)
Q Consensus       100 Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~LP~p~~~~~~l~~~F~~~Gls~~  178 (329)
                      |+.||++||+.||++|||||||+||||+||+++|||.|+|++||+|++++....+ +||+|+.++++|++.|++|||+++
T Consensus        77 id~iK~~le~~cp~~VScADilalAardav~~~GGP~~~v~~GRrD~~~s~~~~~~~lP~p~~~~~~l~~~F~~~Gl~~~  156 (300)
T 1qgj_A           77 IDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALGRKDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNIT  156 (300)
T ss_dssp             HHHHHHHHHHHSTTTSCHHHHHHHHHHHHHHTTTCCCCCCCBCCCBCSSCCHHHHTTSCCTTSCHHHHHHHHHTTTCCHH
T ss_pred             HHHHHHHHHhhCCCcccHHHHHHHHHhHHHHHcCCCcccccCCCCCCCCcCcchhhcCCCcccCHHHHHHHHHHcCCCHH
Confidence            9999999999999999999999999999999999999999999999999987766 799999999999999999999999


Q ss_pred             cceeecccceeccccccccCCcC--------CCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHHHhhhc
Q 040171          179 ETVVILGAHTVGVVHCSFFQDRL--------ADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLFK  250 (329)
Q Consensus       179 dlVaLsGaHTiG~~hc~~f~~Rl--------~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~  250 (329)
                      ||||||||||||++||.+|.+||        +||+|++.|++.|++.||..++++ ++++||+.||.+|||+||++|+.+
T Consensus       157 d~VaLsGaHTiG~ahc~~f~~Rlynf~g~~~~dp~~~~~~~~~L~~~Cp~~~~~~-~~~~~D~~tp~~FDn~Yy~~l~~~  235 (300)
T 1qgj_A          157 DVVALSGAHTFGQAKCAVFSNRLFNFTGAGNPDATLETSLLSNLQTVCPLGGNSN-ITAPLDRSTTDTFDNNYFKNLLEG  235 (300)
T ss_dssp             HHHHHHGGGGSSEEEGGGTGGGTSCSSSSSCCCTTSCHHHHHHHHHHSCTTSCTT-CEEESSSSCSSSCSTHHHHHHHTT
T ss_pred             HheeeeccceeceecccccccccccCCCCCCCCCCcCHHHHHHHHhhCCCCCCCC-cccccCCCCCcccccHHHHHHhcc
Confidence            99999999999999999999998        489999999999999999755444 678899899999999999999999


Q ss_pred             ccCccchhhhcc-Ccc---hHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCcccccccccccC
Q 040171          251 RGVLQIDQALAL-DAS---THDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFNR  313 (329)
Q Consensus       251 ~gll~SD~~L~~-d~~---t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n~  313 (329)
                      +|+|+|||+|+. |++   |+++|+.||.||+.|+++|++||+||++|+  ||.+||||++|+.+|+
T Consensus       236 ~gll~SD~~L~~~d~~~~~t~~~v~~ya~~~~~F~~~Fa~Am~Km~~i~--tg~~GeiR~~C~~~N~  300 (300)
T 1qgj_A          236 KGLLSSDQILFSSDLAVNTTKKLVEAYSRSQSLFFRDFTCAMIRMGNIS--NGASGEVRTNCRVINN  300 (300)
T ss_dssp             CCSSHHHHHHHHSTTTTTTTHHHHHHHHHCHHHHHHHHHHHHHHHTTCB--CCCCCBCCSBTTBCCC
T ss_pred             CcccHHHHHHHcCCCccccHHHHHHHHhcCHHHHHHHHHHHHHHHhcCC--CCCCCcccCccCCcCC
Confidence            999999999999 999   999999999999999999999999999999  9999999999999994


No 8  
>1iyn_A Chloroplastic ascorbate peroxidase; hydrogen peroxide, tobacco plant, stromal ascorbate peroxidase, oxidoreductase; HET: HEM; 1.60A {Nicotiana tabacum} SCOP: a.93.1.1
Probab=100.00  E-value=4.7e-74  Score=546.12  Aligned_cols=255  Identities=22%  Similarity=0.307  Sum_probs=224.1

Q ss_pred             ccHHHHHHHHHHHHHhhCCCcHHHHHHHHhhccc-----------CCCCCCcceeccCCCCCCCCCCCCCCCCC-chhHH
Q 040171           32 PEAESIIFNVVQRRFNTDRSITGALLRMHFHDCF-----------SGNVCDASILIDSTIRSQPEKDSGSNLTV-RGYEI   99 (329)
Q Consensus        32 P~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcf-----------v~~GcDgSill~~~~~~~~E~~~~~N~~L-~g~~~   99 (329)
                      |...+.||+.|++.+. +++++|+||||+|||||           ++ ||||||||+      +|+++++|.+| +||++
T Consensus         5 ~~d~~~vr~~i~~~~~-~~~~~a~llRL~FHDc~ty~~~~~~~~~~g-GcDgSill~------~E~~~~~N~~l~rg~~~   76 (295)
T 1iyn_A            5 SAQLKSAREDIKELLK-TKFCHPIMVRLGWHDAGTYNKNIEEWPQRG-GANGSLRFD------VELKHGANAGLVNALNL   76 (295)
T ss_dssp             HHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHTTCCTTCCSTTTTC-SSSSGGGSH------HHHTSGGGTTTHHHHHH
T ss_pred             HHHHHHHHHHHHHHHh-CCCchHHHHHHHHHHHhccccccccccCCC-CCCeeEEeh------hhccCccccCHHHHHHH
Confidence            4556789999998775 68999999999999999           36 999999997      69999999988 89999


Q ss_pred             HHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCCCC--CCCC--CCCCHHHHHHHHHHcCC
Q 040171          100 IDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEV--NLPG--TSLSVPNVLQMFAEKGF  175 (329)
Q Consensus       100 Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~--~LP~--p~~~~~~l~~~F~~~Gl  175 (329)
                      |+.||+++|     .|||||||+||||+||+++|||.|+|++||+|++++....+  +||+  |..++++|++.|++|||
T Consensus        77 i~~iK~~~e-----~VScADilalAardaV~~~GGP~~~v~~GR~D~~~s~~~~~~~~LP~~~p~~~~~~l~~~F~~~Gl  151 (295)
T 1iyn_A           77 LKPIKDKYS-----GVTYADLFQLASATAIEEAGGPKIPMKYGRVDVTEPEQCPEEGRLPDAGPPSPAQHLRDVFYRMGL  151 (295)
T ss_dssp             HHHHHHHCT-----TSCHHHHHHHHHHHHHHHTTCCCCCCCBCBCCCCSGGGSCCSCCSCCSSCSSHHHHHHHHHHHHTC
T ss_pred             HHHHHHHcC-----CCCHHHHHHHhccceeeeccCceeeeccCCCCCCccccccccccCCCCCCCCCHHHHHHHHHHcCC
Confidence            999999997     59999999999999999999999999999999999876555  7999  88999999999999999


Q ss_pred             CcccceeecccceeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHHHhhhccc---
Q 040171          176 NTTETVVILGAHTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLFKRG---  252 (329)
Q Consensus       176 s~~dlVaLsGaHTiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~~g---  252 (329)
                      |++||||||||||||++||    +|+..+..++.|+    ..||..+... +|   + .||.+|||+||++|+.++|   
T Consensus       152 ~~~dmVaLsGaHTiG~ahc----~r~g~~~~d~~~~----~~cp~~~~~~-~~---~-~tp~~FDN~Yy~~l~~~~g~~~  218 (295)
T 1iyn_A          152 NDKEIVALSGAHTLGRSRP----DRSGWGKPETKYT----KDGPGAPGGQ-SW---T-AQWLKFDNSYFKDIKERRDEDL  218 (295)
T ss_dssp             CHHHHHHHHGGGGSCEECT----TTTSCSCSCCTTT----TTCSSSCCSE-ES---S-TTTTSCSTHHHHHHHHCCCTTS
T ss_pred             CHHHheeeccccccchhhh----hhcCCCCCCchHH----hcCCCCCCCC-cc---c-cCccccchHHHHhhhhcCCCcc
Confidence            9999999999999999999    4542122234454    6898533222 23   3 6999999999999999999   


Q ss_pred             -CccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCccccccccccc
Q 040171          253 -VLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFN  312 (329)
Q Consensus       253 -ll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  312 (329)
                       +|+||++|+.|++|+++|+.||.|++.|+++|++||+||++|+|+||.+||||.+|.-.|
T Consensus       219 ~ll~SD~~L~~d~~t~~~V~~yA~~~~~F~~~Fa~Am~Km~~lgv~tg~~g~Irl~~~~~~  279 (295)
T 1iyn_A          219 LVLPTDAALFEDPSFKVYAEKYAADPEAFFKDYAEAHAKLSNLGAKFGPAEGFSLEGSPAG  279 (295)
T ss_dssp             CCCHHHHHHHHSTTHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTCCBSSTTCBCSCC----
T ss_pred             eecchhhhhhcCccHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCCCCCCCCeeEeCCCCcc
Confidence             999999999999999999999999999999999999999999999999999999999655


No 9  
>1llp_A LIP4.15, lignin peroxidase; heme protein, glyco protein,, oxidoreductase; HET: NAG MAN A2G HEM; 1.70A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1lga_A* 1b80_A* 1b82_A* 1b85_A* 1qpa_A*
Probab=100.00  E-value=6.5e-70  Score=525.79  Aligned_cols=237  Identities=25%  Similarity=0.366  Sum_probs=217.7

Q ss_pred             ccCCCcccccc-CCccHHHHHHHHHHHHHhhCCCcHHHHHHHHhhcccC-------------CCCCCcceeccCCCCCCC
Q 040171           19 LAKLTPNFYSS-SCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFS-------------GNVCDASILIDSTIRSQP   84 (329)
Q Consensus        19 ~~~L~~~fY~~-sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv-------------~~GcDgSill~~~~~~~~   84 (329)
                      .++|+.+||++ +||++                  ++.||||+||||||             + ||||||||+++    +
T Consensus        21 ~~~L~~~fy~~~sCp~~------------------~~~llRLafHDc~ty~~sd~~~g~~~~g-GcDGSIlL~~~----~   77 (343)
T 1llp_A           21 LDDIQANMFHGGQCGAE------------------AHESIRLVFHDSIAISPAMEAKGKFGGG-GADGSIMIFDT----I   77 (343)
T ss_dssp             HHHHHHHTSTTTCCSHH------------------HHHHHHHHHHHHTCCCHHHHHTTSCCCC-SSSSHHHHTHH----H
T ss_pred             HHHHHHhhhccCCCchh------------------HHHHHHHHHhhhhccccccccccccCCC-CCCceeccCCc----c
Confidence            35799999999 99986                  99999999999998             5 99999999753    6


Q ss_pred             CCCCCCCCCCchhHHHHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHh-CCCCcccCCCCCCCCCCCCCCCCCCCCCCCH
Q 040171           85 EKDSGSNLTVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALA-GGLNYSLPTGRLDGLRSNADEVNLPGTSLSV  163 (329)
Q Consensus        85 E~~~~~N~~L~g~~~Id~iK~~le~~cp~~VScADilalAar~av~~~-GGP~~~v~~GR~D~~~s~~~~~~LP~p~~~~  163 (329)
                      |+++++|.+|+  ++|+.||..+|+.   +|||||||+|||++||+.+ |||.|+|++||+|++++.+.. +||.|+.++
T Consensus        78 Ek~~~~N~~L~--~vi~~lk~~~e~~---~VScADiiaLAg~vav~~~~GGP~~~v~~GR~Da~~~~~~g-~lP~p~~~~  151 (343)
T 1llp_A           78 ETAFHPNIGLD--EVVAMQKPFVQKH---GVTPGDFIAFAGAVALSNCPGAPQMNFFTGRKPATQPAPDG-LVPEPFHTV  151 (343)
T ss_dssp             HTTSGGGTTHH--HHHHHHHHHHHHH---TCCHHHHHHHHHHHHHHTSTTCCCCCCEECCCCCSSCCCSS-CSCCTTSCH
T ss_pred             ccCCccccCHH--HHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHhccCCCeeeCCCCCCCCCCcCccC-CCCCCCCCH
Confidence            99999999998  9999999999998   8999999999999999988 999999999999999998766 899999999


Q ss_pred             HHHHHHHHHcC-CCcccceeecccceeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChH
Q 040171          164 PNVLQMFAEKG-FNTTETVVILGAHTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQ  242 (329)
Q Consensus       164 ~~l~~~F~~~G-ls~~dlVaLsGaHTiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~  242 (329)
                      ++|++.|++|| ||.+|||||+||||||++|+.       ||+|+                    .++|| .||.+|||+
T Consensus       152 ~~L~~~F~~~G~Ls~~EmVaLsGaHTiG~a~~~-------dp~~~--------------------g~~~d-~tP~~FDN~  203 (343)
T 1llp_A          152 DQIIARVNDAGEFDELELVWMLSAHSVAAVNDV-------DPTVQ--------------------GLPFD-STPGIFDSQ  203 (343)
T ss_dssp             HHHHHHHHHHHCCCHHHHHHHGGGGGGCEESSS-------STTCS--------------------CEESS-SCTTSCSSH
T ss_pred             HHHHHHHHHcCCCChHHheeeccccchhhhccC-------CCCcc--------------------ccccC-CcccccchH
Confidence            99999999999 999999999999999999952       55553                    24577 499999999


Q ss_pred             HHHHhhh-c-------------------ccCccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCc
Q 040171          243 YYNQTLF-K-------------------RGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQG  302 (329)
Q Consensus       243 Yy~~l~~-~-------------------~gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~G  302 (329)
                      ||+||+. +                   +|+|+||++|+.|++|+++|+.||.||+.|+++|++||+||++|+    .+|
T Consensus       204 Yf~nLl~~~~~~pg~~~~~g~~~~~~~~~~~l~SD~~L~~d~~t~~~v~~yA~d~~~F~~dFa~Am~Km~~lg----~~g  279 (343)
T 1llp_A          204 FFVETQFRGTLFPGSGGNQGEVESGMAGEIRIQTDHTLARDSRTACEWQSFVGNQSKLVDDFQFIFLALTQLG----QDP  279 (343)
T ss_dssp             HHHHTTBCCCBCSSCSCCTTEECBSSTTCCEEHHHHHHTTSTTTHHHHHTTTTCHHHHHHHHHHHHHHHHTTT----SCG
T ss_pred             HHHHHHhcCccccccCCCcccccccccccccchhhHHHHhCCchhHHHHHhccCHHHHHHHHHHHHHHHHccC----CCC
Confidence            9999998 3                   679999999999999999999999999999999999999999998    489


Q ss_pred             ccccccccccCCCC
Q 040171          303 EIRQNCRAFNRDNN  316 (329)
Q Consensus       303 eiR~~C~~~n~~~~  316 (329)
                      |||++|+.+||..+
T Consensus       280 eir~~C~~vn~~~~  293 (343)
T 1llp_A          280 NAMTDCSDVIPLSK  293 (343)
T ss_dssp             GGSEECGGGSCCCC
T ss_pred             ceeCcCcccCCCcc
Confidence            99999999997644


No 10 
>2e39_A Peroxidase; heme protein, coordination geometry of heme iron, ARP, perox oxidoreductase; HET: NAG MAN HEM; 1.30A {'arthromyces ramosus'} SCOP: a.93.1.1 PDB: 1arp_A* 1arv_A* 1arw_A* 1arx_A* 1ary_A* 1c8i_A* 1ck6_A* 1gza_A* 1gzb_A* 1hsr_A* 1aru_A* 2e3a_A* 2e3b_A* 1lyk_A* 1lyc_A* 1ly9_A* 1h3j_A* 1ly8_A*
Probab=100.00  E-value=1.6e-69  Score=523.53  Aligned_cols=237  Identities=25%  Similarity=0.384  Sum_probs=217.2

Q ss_pred             ccCCCcccccc-CCccHHHHHHHHHHHHHhhCCCcHHHHHHHHhhcccC-------------CCCCCcceeccCCCCCCC
Q 040171           19 LAKLTPNFYSS-SCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCFS-------------GNVCDASILIDSTIRSQP   84 (329)
Q Consensus        19 ~~~L~~~fY~~-sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv-------------~~GcDgSill~~~~~~~~   84 (329)
                      .++|+.+||++ +||++                  ++.||||+||||||             + ||||||||+++    +
T Consensus        30 ~~~L~~~~y~~~sCp~~------------------a~~llRLafHDc~vy~~sd~~~g~~~~g-GcDgSIll~~~----~   86 (344)
T 2e39_A           30 LDDLQTNFYQGSKCESP------------------VRKILRIVFHDAIGFSPALTAAGQFGGG-GADGSIIAHSN----I   86 (344)
T ss_dssp             HHHHHHTTTTTTCCSHH------------------HHHHHHHHHHHHTCCCHHHHHTTSCCCC-SSSSHHHHTHH----H
T ss_pred             HHHHHHHhccCCCccHH------------------HHHHHHHHHhhhhcccccccccccCCCC-CCCceeecCCc----c
Confidence            35799999998 99986                  99999999999999             6 99999999753    6


Q ss_pred             CCCCCCCCCCchhHHHHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHh-CCCCcccCCCCCCCCCCCCCCCCCCCCCCCH
Q 040171           85 EKDSGSNLTVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALA-GGLNYSLPTGRLDGLRSNADEVNLPGTSLSV  163 (329)
Q Consensus        85 E~~~~~N~~L~g~~~Id~iK~~le~~cp~~VScADilalAar~av~~~-GGP~~~v~~GR~D~~~s~~~~~~LP~p~~~~  163 (329)
                      |+++++|.+|+  ++|+.||..+|+.   +|||||||+|||++||+.+ |||.|+|++||+|++++.+.. +||+|+.++
T Consensus        87 Ek~~~~N~~L~--~vi~~lk~~~e~~---~VScADiiaLAg~vav~~~~GGP~~~v~~GR~Da~~~~~~g-~lP~p~~~~  160 (344)
T 2e39_A           87 ELAFPANGGLT--DTIEALRAVGINH---GVSFGDLIQFATAVGMSNCPGSPRLEFLTGRSNSSQPSPPS-LIPGPGNTV  160 (344)
T ss_dssp             HTTSGGGTTCH--HHHHHHHHHHHHH---TCCHHHHHHHHHHHHHHTSTTCCCCCCEECCCSCCCCCCSS-CSCCTTSCH
T ss_pred             ccCcccccCHH--HHHHHHHHHHHHh---cCCHHHHHHHHHHHHHHHhccCCcccccCCCCCCCcCCccc-CCCCCCCCH
Confidence            99999999998  9999999999998   8999999999999999987 999999999999999998766 899999999


Q ss_pred             HHHHHHHHHcCCCcccceeecccceeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHH
Q 040171          164 PNVLQMFAEKGFNTTETVVILGAHTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQY  243 (329)
Q Consensus       164 ~~l~~~F~~~Gls~~dlVaLsGaHTiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Y  243 (329)
                      ++|++.|++||||.+||||||||||||++|+.       ||+++                    .++|| .||.+|||+|
T Consensus       161 ~~L~~~F~~~GLs~~EmVaLsGaHTiG~a~~~-------d~~~~--------------------~~~~d-~tP~~fDN~Y  212 (344)
T 2e39_A          161 TAILDRMGDAGFSPDEVVDLLAAHSLASQEGL-------NSAIF--------------------RSPLD-STPQVFDTQF  212 (344)
T ss_dssp             HHHHHHHHHHTCCHHHHHHHGGGGGSCEESSS-------CTTST--------------------TEESS-SCTTSCSTHH
T ss_pred             HHHHHHHHHcCCCHHHHHHhhcccchhhcccc-------CCCcc--------------------ccccC-CcccccchHH
Confidence            99999999999999999999999999999962       45543                    13567 5999999999


Q ss_pred             HHHhhhc-cc-------------------CccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCcc
Q 040171          244 YNQTLFK-RG-------------------VLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGE  303 (329)
Q Consensus       244 y~~l~~~-~g-------------------ll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~Ge  303 (329)
                      |+||+.+ +|                   +|+||++|+.|++|+++|+.||.||+.|+++|++||+||++|+    .+||
T Consensus       213 f~nLl~~~~g~p~~~~~~ge~~~~~~~~~~l~SD~~L~~d~~t~~~v~~yA~d~~~F~~dFa~Am~Km~~lg----~~ge  288 (344)
T 2e39_A          213 YIETLLKGTTQPGPSLGFAEELSPFPGEFRMRSDALLARDSRTACRWQSMTSSNEVMGQRYRAAMAKMSVLG----FDRN  288 (344)
T ss_dssp             HHHHTBCCCBCCSSSCCTTEECBSSTTCCEEHHHHHHHHSTTTHHHHHHTSSCHHHHHHHHHHHHHHHTTTT----SCGG
T ss_pred             HHHHHhcccccccCCcccccccCCCccceeehhhhhhhcCccHHHHHHHhccCHHHHHHHHHHHHHHHHccC----CCCc
Confidence            9999975 66                   9999999999999999999999999999999999999999998    4899


Q ss_pred             cccccccccCCCC
Q 040171          304 IRQNCRAFNRDNN  316 (329)
Q Consensus       304 iR~~C~~~n~~~~  316 (329)
                      ||++|+.+||..+
T Consensus       289 ir~~C~~vn~~~~  301 (344)
T 2e39_A          289 ALTDCSDVIPSAV  301 (344)
T ss_dssp             GSEECGGGSCCCC
T ss_pred             ccCcCcccCCCCc
Confidence            9999999997644


No 11 
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A*
Probab=100.00  E-value=1.7e-69  Score=561.63  Aligned_cols=277  Identities=17%  Similarity=0.247  Sum_probs=251.7

Q ss_pred             cCCCccc-cccCCccHH-HHHHHHHHHHHhhC--------CCcHHHHHHHHhhcccCC------CCCC-cceeccCCCCC
Q 040171           20 AKLTPNF-YSSSCPEAE-SIIFNVVQRRFNTD--------RSITGALLRMHFHDCFSG------NVCD-ASILIDSTIRS   82 (329)
Q Consensus        20 ~~L~~~f-Y~~sCP~~e-~iV~~~v~~~~~~~--------~~~a~~llRL~FHDcfv~------~GcD-gSill~~~~~~   82 (329)
                      ..|..+| |+++||+++ ++|++.|++.+..+        +.++|.+|||+||||||+      +||| |||++.     
T Consensus        56 ~pl~~~f~Y~~~~~~~d~~~Vk~~v~~~~~~~~~~wpad~~~~~~~liRL~fHDc~t~~~sd~~gG~dggsi~~~-----  130 (740)
T 2cca_A           56 DPMGAAFDYAAEVATIDVDALTRDIEEVMTTSQPWWPADYGHYGPLFIRMAWHAAGTYRIHDGRGGAGGGMQRFA-----  130 (740)
T ss_dssp             CTTCTTCCHHHHHTTCCHHHHHHHHHHHHTSCCTTSCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST-----
T ss_pred             CCCCcccchhhccCchHHHHHHHHHHHHHhcccccccccCCccHHHHHHHHHhhcccccccCCCCCCCCcccccc-----
Confidence            4589999 999999999 99999999999998        799999999999999994      3999 899885     


Q ss_pred             CCCCCCCCCCCC-chhHHHHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCC---------
Q 040171           83 QPEKDSGSNLTV-RGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNAD---------  152 (329)
Q Consensus        83 ~~E~~~~~N~~L-~g~~~Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~---------  152 (329)
                       +|+++++|.+| +||++|+.||+++    |++|||||||+||||+||+++|||.|.|++||+|++++...         
T Consensus       131 -~E~~~~~N~~l~~~~~~i~~iK~k~----p~~VScADilaLAar~Av~~~Ggp~~~~~~GR~D~~~~~~~~wg~e~~~~  205 (740)
T 2cca_A          131 -PLNSWPDNASLDKARRLLWPVKKKY----GKKLSWADLIVFAGNCALESMGFKTFGFGFGRVDQWEPDEVYWGKEATWL  205 (740)
T ss_dssp             -TGGGCGGGTTHHHHHHTTHHHHHHH----GGGSCHHHHHHHHHHHHHHHTTCCCSCCCBCCCCCSSCCCCCCCSCSSTT
T ss_pred             -hhccCccccchHHHHHHHHHHHHhc----cCCccHHHHHHHHHHHHHHHcCCCccCCCCCCCCCccccccccCcccccc
Confidence             69999999998 8999999999999    78999999999999999999999999999999999887541         


Q ss_pred             ----------------------------CC-CCCCCCCCHHHHHHHHHHcCCCcccceee-cccceeccccccccCCcC-
Q 040171          153 ----------------------------EV-NLPGTSLSVPNVLQMFAEKGFNTTETVVI-LGAHTVGVVHCSFFQDRL-  201 (329)
Q Consensus       153 ----------------------------~~-~LP~p~~~~~~l~~~F~~~Gls~~dlVaL-sGaHTiG~~hc~~f~~Rl-  201 (329)
                                                  +. +||+|..++++|++.|++||||++||||| +||||||++||..|.+|+ 
T Consensus       206 ~~~r~~~~~~l~~p~~a~~mgliyvnpeg~~~lP~P~~s~~~l~~~F~r~Gln~~E~VALisGaHTiG~ahc~~~~~rl~  285 (740)
T 2cca_A          206 GDERYSGKRDLENPLAAVQMGLIYVNPEGPNGNPDPMAAAVDIRETFRRMAMNDVETAALIVGGHTFGKTHGAGPADLVG  285 (740)
T ss_dssp             CCCCEETTTEECTTCCSSSTTCSSSCTTSGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSCCCCBSSCGGGBC
T ss_pred             ccccccccccccccchhhcccccccccccccCCCCcccCHHHHHHHHHhcCCCHHHhhhhhcCcccchhhcccchhhccC
Confidence                                        11 48999999999999999999999999999 799999999999999999 


Q ss_pred             CCCCCCHHHHHHH--HhhCCCCCC-CCCCCCCCC---CCCCcccChHHHHHhhhc-------------------------
Q 040171          202 ADSDMDPAFAQEL--SKACEASSG-SDDPMTNLD---RGTPTSLDSQYYNQTLFK-------------------------  250 (329)
Q Consensus       202 ~dp~~d~~~~~~L--~~~Cp~~~~-~~~~~~~lD---~~tp~~FDN~Yy~~l~~~-------------------------  250 (329)
                      +||++++.|++.|  +..||.... +. ....+|   +.||.+|||+||++|+.+                         
T Consensus       286 ~dp~~~~~~~~~lg~~~~c~~g~~~~~-~~sgld~~wt~tP~~fDN~Yf~~L~~~~w~~~~sp~g~~qw~~~~~~~~~~~  364 (740)
T 2cca_A          286 PEPEAAPLEQMGLGWKSSYGTGTGKDA-ITSGIEVVWTNTPTKWDNSFLEILYGYEWELTKSPAGAWQYTAKDGAGAGTI  364 (740)
T ss_dssp             CCGGGSCGGGTTCCCCBCSTTSSGGGC-BSSSCCCCCCSCTTSCSSHHHHHHHHSCEEEEECTTSCEEEEEGGGTTTTCB
T ss_pred             CCCccCHHHHHhhhhhccCCCCCCCCc-cccCCCccccCCCCcccHHHHHHHHhCccccccCCCcccccccCCccccccC
Confidence            8999999999996  999996432 11 244455   479999999999999987                         


Q ss_pred             ----------ccCccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhc--CCCCCCCCc-ccccc
Q 040171          251 ----------RGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGS--LQVLTDGQG-EIRQN  307 (329)
Q Consensus       251 ----------~gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~--lgv~tg~~G-eiR~~  307 (329)
                                ++||+||++|+.|++|+++|++||.|++.|+++|++||+||++  +||+||..| ||-+.
T Consensus       365 p~~~~~~~~~~~mL~SD~aL~~Dp~~~~iv~~fa~d~~~F~~~FA~Am~KL~~~d~gp~t~~~G~~~p~~  434 (740)
T 2cca_A          365 PDPFGGPGRSPTMLATDLSLRVDPIYERITRRWLEHPEELADEFAKAWYKLIHRDMGPVARYLGPLVPKQ  434 (740)
T ss_dssp             CCTTSCCCBCCEECHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGCBSTTCCSC
T ss_pred             CccccCCCCCcccchhhHHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHhccCCCCCcCCCCCCCCch
Confidence                      5899999999999999999999999999999999999999999  999999999 66554


No 12 
>3m5q_A Manganese peroxidase 1; heme, Mn(II)-binding site, Ca(II)-binding site, glycosylation, ultrahigh resolution, calcium; HET: NAG MAN HEM; 0.93A {Phanerochaete chrysosporium} SCOP: a.93.1.1 PDB: 1mnp_A* 1yyg_A* 1yzp_A* 1yzr_A* 1yyd_A* 3m8m_A* 1mn1_A* 1mn2_A*
Probab=100.00  E-value=1.4e-67  Score=511.48  Aligned_cols=243  Identities=26%  Similarity=0.334  Sum_probs=219.3

Q ss_pred             CCccHHHHHHHHHHHHHhh--CCCcHHHHHHHHhhcccC----------CCCCCcceeccCCCCCCCCCCCCCCCCCchh
Q 040171           30 SCPEAESIIFNVVQRRFNT--DRSITGALLRMHFHDCFS----------GNVCDASILIDSTIRSQPEKDSGSNLTVRGY   97 (329)
Q Consensus        30 sCP~~e~iV~~~v~~~~~~--~~~~a~~llRL~FHDcfv----------~~GcDgSill~~~~~~~~E~~~~~N~~L~g~   97 (329)
                      +|.. +..|+++|++.+..  +...++.||||+|||||+          + ||||||||.++    +|+++++|.+|+  
T Consensus        13 ~cc~-~~~V~~di~~~l~~~~~g~~a~~llRLafHDc~t~~~~~g~~~~g-GcDGSill~~~----~Ek~~~~N~gL~--   84 (357)
T 3m5q_A           13 ACCA-FIPLAQDLQETIFQNECGEDAHEVIRLTFHDAIAISRSQGPKAGG-GADGSMLLFPT----VEPNFSANNGID--   84 (357)
T ss_dssp             GGTT-HHHHHHHHHHHTTTTCCSHHHHHHHHHHHHHHHCCCTTTCGGGCC-SSSCHHHHSTT----TGGGSGGGTTTH--
T ss_pred             cccc-HHHHHHHHHHHHhcCCCchHHHHHHHHHHhhccccccccCCCCCC-CCccccccCCc----cccCCccccCHH--
Confidence            4433 57789999999886  678999999999999994          5 99999998643    699999999998  


Q ss_pred             HHHHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHH-hCCCCcccCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcC-C
Q 040171           98 EIIDEIKNAVEQKCPSTVSCADIIALATRDAVAL-AGGLNYSLPTGRLDGLRSNADEVNLPGTSLSVPNVLQMFAEKG-F  175 (329)
Q Consensus        98 ~~Id~iK~~le~~cp~~VScADilalAar~av~~-~GGP~~~v~~GR~D~~~s~~~~~~LP~p~~~~~~l~~~F~~~G-l  175 (329)
                      ++|+.||..+|+.|  +|||||||+|||++||+. +|||.|+|++||+|++++.+.. +||.|..++++|++.|+++| |
T Consensus        85 ~vid~lk~~~e~~~--~VScADiiaLAg~vAv~~~~GGP~~~v~~GR~Da~~~~~~g-~lP~p~~~~~~L~~~F~~~G~L  161 (357)
T 3m5q_A           85 DSVNNLIPFMQKHN--TISAADLVQFAGAVALSNCPGAPRLEFLAGRPNKTIAAVDG-LIPEPQDSVTKILQRFEDAGGF  161 (357)
T ss_dssp             HHHHHHHHHHHHST--TSCHHHHHHHHHHHHHHTSTTCCCCCCEECCCSCCCCCCTT-CSCCTTCCHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHhcCCCCccccCCCcCCCcCCCCC-CCCCCCCCHHHHHHHHHHcCCC
Confidence            99999999999998  999999999999999996 6999999999999999987765 79999999999999999999 9


Q ss_pred             CcccceeecccceeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHHHhhh------
Q 040171          176 NTTETVVILGAHTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLF------  249 (329)
Q Consensus       176 s~~dlVaLsGaHTiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~------  249 (329)
                      |++||||||||||||++||.       ||+++                    .++|| .||.+|||+||+||+.      
T Consensus       162 s~~EmVALsGaHTiG~ah~~-------dp~~~--------------------g~~~d-~tP~~FDN~Yf~nLl~~~~~~~  213 (357)
T 3m5q_A          162 TPFEVVSLLASHSVARADKV-------DQTID--------------------AAPFD-STPFTFDTQVFLEVLLKGVGFP  213 (357)
T ss_dssp             CHHHHHHHGGGGGGCEESSS-------STTCS--------------------CEESS-SCTTSCSSHHHHHHTBCCCBCS
T ss_pred             ChHHHhhhcchhhcccccCC-------CCCCC--------------------ccccC-CCCCccCHHHHHHHHhcccccc
Confidence            99999999999999999973       55553                    13566 7999999999999985      


Q ss_pred             ---------------------cccCccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCccccccc
Q 040171          250 ---------------------KRGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNC  308 (329)
Q Consensus       250 ---------------------~~gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C  308 (329)
                                           ++++|+||++|+.|++|+++|+.||+||+.|+++|++||+||++||++    +|||++|
T Consensus       214 ~~~~~~~~~~~p~~~~~~~~~g~~lL~SD~~L~~d~~tr~~ve~yA~dq~~F~~dFa~Am~Km~~lgv~----~~ir~~C  289 (357)
T 3m5q_A          214 GSANNTGEVASPLPLGSGSDTGEMRLQSDFALAHDPRTACIWQGFVNEQAFMAASFRAAMSKLAVLGHN----RNSLIDC  289 (357)
T ss_dssp             SCSCCTTEECBSCCCCBTTBCCCCEEHHHHHHHHSTTTHHHHHHTTTCHHHHHHHHHHHHHHHTTTTSC----GGGSEEC
T ss_pred             ccCcccccccccccccccccccccccccCHHHhcCccHHHHHHHHhhhHHHHHHHHHHHHHHHHhcCCC----ccccccC
Confidence                                 358999999999999999999999999999999999999999999984    6899999


Q ss_pred             ccccCCC
Q 040171          309 RAFNRDN  315 (329)
Q Consensus       309 ~~~n~~~  315 (329)
                      +.|||..
T Consensus       290 s~v~p~~  296 (357)
T 3m5q_A          290 SDVVPVP  296 (357)
T ss_dssp             GGGSCCC
T ss_pred             cccCCCC
Confidence            9999765


No 13 
>3fmu_A VersatIle peroxidase VPL2; class II (fungal) peroxidases, protoporphyrin IX, electron T lignin peroxidase, lignin degradation; HET: HEM; 1.04A {Pleurotus eryngii} PDB: 3fjw_A* 2boq_A* 3fm1_A* 3fm4_A* 3fm6_A* 3fkg_A* 2w23_A* 2vka_A* 4fcn_A* 4g05_A* 4fcs_A* 4fef_A* 4fdq_A*
Probab=100.00  E-value=2.9e-67  Score=505.15  Aligned_cols=242  Identities=26%  Similarity=0.323  Sum_probs=216.5

Q ss_pred             HHHHHHHHHHHHHhhCC---CcHHHHHHHHhhcccCC------CCCCcceeccCCCCCCCCCCCCCCCCCchhHHHHHHH
Q 040171           34 AESIIFNVVQRRFNTDR---SITGALLRMHFHDCFSG------NVCDASILIDSTIRSQPEKDSGSNLTVRGYEIIDEIK  104 (329)
Q Consensus        34 ~e~iV~~~v~~~~~~~~---~~a~~llRL~FHDcfv~------~GcDgSill~~~~~~~~E~~~~~N~~L~g~~~Id~iK  104 (329)
                      .+..|+++|++.+..+.   ..++.||||+|||||++      +||||||||+++    +|+++++|.+|+  ++|+.||
T Consensus        16 ~~~~v~~di~~~l~~~g~~g~~a~~llRLafHDc~ty~~~d~~gGcDgSill~~~----~Ek~~~~N~gL~--~vid~lk   89 (331)
T 3fmu_A           16 ILFPILDDIQENLFDGAQCGEEVHESLRLTFHDAIGFSPTLGGGGADGSIIAFDT----IETNFPANAGID--EIVSAQK   89 (331)
T ss_dssp             GHHHHHHHHHHHTSTTTCSSHHHHHHHHHHHHHHTCCBTTTBCCSSSSHHHHTHH----HHTTSGGGTTHH--HHHHHHH
T ss_pred             CHHHHHHHHHHHHhhCCCCChHHHHHHHHHHhhcccccCCCCCCCCchhhhcCCc----ccccCccccCHH--HHHHHHH
Confidence            35789999999998764   36779999999999972      299999999632    599999999987  8999999


Q ss_pred             HHHhhhCCCCCCHHHHHHHhHHHHHHH-hCCCCcccCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCcccceee
Q 040171          105 NAVEQKCPSTVSCADIIALATRDAVAL-AGGLNYSLPTGRLDGLRSNADEVNLPGTSLSVPNVLQMFAEKGFNTTETVVI  183 (329)
Q Consensus       105 ~~le~~cp~~VScADilalAar~av~~-~GGP~~~v~~GR~D~~~s~~~~~~LP~p~~~~~~l~~~F~~~Gls~~dlVaL  183 (329)
                      ..+|+.   +|||||||+|||++||+. +|||.|+|++||+|++++.+.. +||.|+.++++|++.|+++|||.+|||||
T Consensus        90 ~~~e~~---~VScADiiaLAa~vav~~~~GGP~~~v~~GR~Da~~~~~~g-~lP~p~~~~~~L~~~F~~~Gls~~EmVaL  165 (331)
T 3fmu_A           90 PFVAKH---NISAGDFIQFAGAVGVSNCPGGVRIPFFLGRPDAVAASPDH-LVPEPFDSVDSILARMGDAGFSPVEVVSL  165 (331)
T ss_dssp             HHHHHS---SSCHHHHHHHHHHHHHHTSTTCCCCCCEECCCCCCSCCCSS-CSCCTTSCHHHHHHHHHHTTCCHHHHHHH
T ss_pred             HHHHHc---cCCHHHHHHHHHHHHHHHhcCCCceeeecCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHcCCChhHhhhe
Confidence            999987   999999999999999996 6999999999999999987765 79999999999999999999999999999


Q ss_pred             cccceeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHHHhhh-cc-----------
Q 040171          184 LGAHTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLF-KR-----------  251 (329)
Q Consensus       184 sGaHTiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~-~~-----------  251 (329)
                      +||||||++||.       ||+++                    .++|| .||.+|||+||+||+. ++           
T Consensus       166 sGaHTiG~ah~~-------dp~~~--------------------g~~~d-~tP~~FDN~Yf~nLl~~~~~~p~~~~~~~e  217 (331)
T 3fmu_A          166 LASHSIAAADKV-------DPSIP--------------------GTPFD-STPGVFDSQFFIETQLKGRLFPGTADNKGE  217 (331)
T ss_dssp             GGGGGGCEESSS-------STTST--------------------TEESS-SCTTSCSTHHHHHTTBCCCBCSSCSCCTTE
T ss_pred             echhhcccccCC-------CCCCC--------------------CCccC-CCCCcccHHHHHHHHhcCccccCCCCCccc
Confidence            999999999962       55553                    13567 7999999999999985 44           


Q ss_pred             --------cCccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCcccccccccccCCCCC
Q 040171          252 --------GVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFNRDNNA  317 (329)
Q Consensus       252 --------gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n~~~~~  317 (329)
                              ++|+||++|+.|++|+++|+.||+||+.|+++|++||+||++|+|+    +|||++|+.+||..++
T Consensus       218 ~~d~~~g~~ll~SD~~L~~d~~tr~~v~~yA~d~~~F~~dFa~Am~Kl~~lgv~----~~ir~~Cs~vnp~~~~  287 (331)
T 3fmu_A          218 AQSPLQGEIRLQSDHLLARDPQTACEWQSMVNNQPKIQNRFAATMSKMALLGQD----KTKLIDCSDVIPTPPA  287 (331)
T ss_dssp             ECBSSTTCCEEHHHHHHHHSTTTHHHHHHTTTCHHHHHHHHHHHHHHHHTTTCC----GGGSEECGGGSCCCCC
T ss_pred             ccCCCCCCcccccChhhhcChhHHHHHHHHhhhHHHHHHHHHHHHHHHHhcCCC----ccccccCCccCCCCCC
Confidence                    3899999999999999999999999999999999999999999984    5899999999987653


No 14 
>2vcn_A Ascorbate peroxidase; INH, APX, isoniazid, oxidoreductase; HET: HEM ISZ; 1.20A {Glycine max} PDB: 2ggn_X* 2ghd_X* 2ghe_X* 2ghc_X* 2vnx_X* 2vnz_X* 2vo2_X* 2wd4_A* 1oaf_A* 1oag_A* 1v0h_X* 2ghh_X* 2ghk_X* 2vcf_X* 2cl4_X* 2vcs_A* 2xi6_A* 2xif_A* 2xih_A* 2xj6_A* ...
Probab=100.00  E-value=1.6e-67  Score=492.92  Aligned_cols=224  Identities=23%  Similarity=0.345  Sum_probs=199.2

Q ss_pred             HHHHHHHHHHHhhCCCcHHHHHHHHhhcccCCCCCCcceeccCCCC---CCCCCCCCCCCCC-chhHHHHHHHHHHhhhC
Q 040171           36 SIIFNVVQRRFNTDRSITGALLRMHFHDCFSGNVCDASILIDSTIR---SQPEKDSGSNLTV-RGYEIIDEIKNAVEQKC  111 (329)
Q Consensus        36 ~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~~GcDgSill~~~~~---~~~E~~~~~N~~L-~g~~~Id~iK~~le~~c  111 (329)
                      +.|++.|++. .++++++|+||||+|||||   |||+|+++.+..+   +.+|+++++|.+| +||++|+.||+++    
T Consensus        28 ~~~r~~v~~~-~~d~~~aa~llRL~FHDc~---gcD~s~~~gg~~gsi~~~~E~~~~~N~~l~~g~~~i~~iK~~~----   99 (261)
T 2vcn_A           28 EKAKKKLRGF-IAEKRCAPLMLRLAAHSAG---TFDKGTKTGGPFGTIKHPAELAHSANNGLDIAVRLLEPLKAEF----   99 (261)
T ss_dssp             CHHHHHHHHH-HHHHTCHHHHHHHHHHHHT---TCBTTTTBCSSSSGGGSHHHHTSGGGTTHHHHHHHHHHHHHTC----
T ss_pred             HHHHHHHHHH-HhCCCchHHHHHHHHccCC---CCCcccCCCCCCccccchhhccCccccCHHHHHHHHHHHHHHh----
Confidence            4577778777 5789999999999999998   6777766654332   2479999999999 6999999999998    


Q ss_pred             CCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH-HHcCCCcccceeecccceec
Q 040171          112 PSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEVNLPGTSLSVPNVLQMF-AEKGFNTTETVVILGAHTVG  190 (329)
Q Consensus       112 p~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~~LP~p~~~~~~l~~~F-~~~Gls~~dlVaLsGaHTiG  190 (329)
                       ++|||||||+||||+||+++|||.|+|++||+|++++.+.. +||+|+.++++|++.| ++||||++||||||||||||
T Consensus       100 -~~VScADilalAardaV~~~GGP~~~v~~GRrD~~~s~~~~-~lP~p~~~~~~l~~~F~~~~Gl~~~d~VaLsGaHTiG  177 (261)
T 2vcn_A          100 -PILSYADFYQLAGVVAVEVTGGPEVPFHPGREDKPEPPPEG-RLPDATKGSDHLRDVFGKAMGLTDQDIVALSGGHTIG  177 (261)
T ss_dssp             -TTSCHHHHHHHHHHHHHHHTTCCCCCCCCCCCCCSSCCCSC-CSCCTTCCHHHHHHHHTTTTCCCHHHHHHHHGGGGSC
T ss_pred             -CCCCHHHHHHHHhhhheeeccCCcccCcCCCCCCCCCCccc-ccCCcccCHHHHHHHHHhhCCCChHHheeeccCcccc
Confidence             69999999999999999999999999999999999987654 8999999999999999 99999999999999999999


Q ss_pred             cccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHHHhhhc--ccCc--cchhhhccCcch
Q 040171          191 VVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLFK--RGVL--QIDQALALDAST  266 (329)
Q Consensus       191 ~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~--~gll--~SD~~L~~d~~t  266 (329)
                      ++||.    |   +                 +..+ +|    +.||.+|||+||++|+.+  +|+|  +||++|+.|++|
T Consensus       178 ~ahc~----r---~-----------------~f~g-~~----~~tp~~FDN~Yy~~Ll~~~~~gll~L~SD~~L~~d~~t  228 (261)
T 2vcn_A          178 AAHKE----R---S-----------------GFEG-PW----TSNPLIFDNSYFTELLSGEKEGLLQLPSDKALLSDPVF  228 (261)
T ss_dssp             EECTT----T---T-----------------SCCE-ES----SSCTTSCSTHHHHHHHHCCCTTCCCCHHHHHHHHCTTH
T ss_pred             ccccc----C---C-----------------CCCC-CC----CCcccccchHHHHHhhccCcCCcccchhhHHHhcCccH
Confidence            99994    2   1                 1111 23    379999999999999999  8986  999999999999


Q ss_pred             HHHHhhhccChhHHHHHHHHHHHHHhcCCCCC
Q 040171          267 HDIVAHFANDEDDFQLSFANVMVKLGSLQVLT  298 (329)
Q Consensus       267 ~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~t  298 (329)
                      +++|+.||.||+.|+++|++||+||++|++.+
T Consensus       229 ~~~V~~ya~~~~~F~~~Fa~Am~Km~~lg~~~  260 (261)
T 2vcn_A          229 RPLVDKYAADEDAFFADYAEAHQKLSELGFAD  260 (261)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHHHHHHHTTTSSC
T ss_pred             HHHHHHHhhCHHHHHHHHHHHHHHHHhcCCCC
Confidence            99999999999999999999999999999864


No 15 
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3
Probab=100.00  E-value=6.1e-69  Score=556.27  Aligned_cols=272  Identities=22%  Similarity=0.273  Sum_probs=247.7

Q ss_pred             cCCCccc-cccCCccHHHHHHHHHHHHHhhC--------CCcHHHHHHHHhhcccCC------CCCC-cceeccCCCCCC
Q 040171           20 AKLTPNF-YSSSCPEAESIIFNVVQRRFNTD--------RSITGALLRMHFHDCFSG------NVCD-ASILIDSTIRSQ   83 (329)
Q Consensus        20 ~~L~~~f-Y~~sCP~~e~iV~~~v~~~~~~~--------~~~a~~llRL~FHDcfv~------~GcD-gSill~~~~~~~   83 (329)
                      ..|..+| |+++||++|++|++.|++.+..+        +.++|.+|||+||||||+      +||| |||++.      
T Consensus        43 ~pl~~~f~Y~~~c~~~d~~Vr~~v~~~~~~~~~~wp~d~~~~g~~liRLafHd~~t~~~~dg~gG~dggsirf~------  116 (720)
T 1ub2_A           43 NPMGPDFNYQEEVQKLDAALKQDLQALMTDSQDWWPADWGHYGGLMIRLTWHAAGTYRIADGRGGAGTGNQRFA------  116 (720)
T ss_dssp             CCSCTTCCHHHHHTTSCSTTHHHHHHHTTCCCTTSCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST------
T ss_pred             CCCCCCcChhhhcCCHHHHHHHHHHHHHhcccccccccCCccHHHHHHHHHhhhccccCcCCCCCCCccccccc------
Confidence            4589999 99999999999999999999998        699999999999999994      3888 888875      


Q ss_pred             CCCCCCCCCCC-chhHHHHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCC----------
Q 040171           84 PEKDSGSNLTV-RGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNAD----------  152 (329)
Q Consensus        84 ~E~~~~~N~~L-~g~~~Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~----------  152 (329)
                      +|+++++|.+| ++|++|+.||+++    |++|||||||+||||+||+.+|||.|.|++||+|++++...          
T Consensus       117 ~E~~~~~N~~l~~a~~~l~~iK~k~----p~~VScADilaLAg~~Av~~~Ggp~~~~~~GR~D~~~~~~~~~~g~e~~~~  192 (720)
T 1ub2_A          117 PLNSWPDNTNLDKARRLLWPIKQKY----GNKLSWADLIAYAGTIAYESMGLKTFGFAFGREDIWHPEKDIYWGPEKEWF  192 (720)
T ss_dssp             TGGGCGGGTTHHHHHHHTHHHHHHH----GGGSCHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCSSCCTTCCCCSCSSSS
T ss_pred             hhccCccccCHHHHHHHHHHHHHHc----cCCccHHHHHHHHHHHHHHHcCCCccCCCCCCCCCCCcccccccccchhcc
Confidence            69999999998 8999999999999    78999999999999999999999999999999999876542          


Q ss_pred             ---------------------------------CC-CCCCCCCCHHHHHHHHHHcCCCcccceee-cccceecccccccc
Q 040171          153 ---------------------------------EV-NLPGTSLSVPNVLQMFAEKGFNTTETVVI-LGAHTVGVVHCSFF  197 (329)
Q Consensus       153 ---------------------------------~~-~LP~p~~~~~~l~~~F~~~Gls~~dlVaL-sGaHTiG~~hc~~f  197 (329)
                                                       +. +||+|..++++|++.|++||||++||||| +||||||++||..|
T Consensus       193 ~~~~~~~~r~~~~~~~~~p~~a~~~gliyvnpeG~~~lP~P~~~~~~lr~~F~r~Gln~~E~VALisGaHTiG~ahc~~~  272 (720)
T 1ub2_A          193 PPSTNPNSRYTGDRELENPLAAVTMGLIYVNPEGVDGNPDPLKTAHDVRVTFARMAMNDEETVALTAGGHTVGKCHGNGN  272 (720)
T ss_dssp             CCSSSTTCSEETTTEECTTCCSSSTTCSSCCTTSBTTBCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHTSCCBCBCSC
T ss_pred             ccccccccccccccccccchhhhhcccccccccccCCCCCCccCHHHHHHHHHHcCCCHHHHHhhccCcccchhhcccch
Confidence                                             01 48999999999999999999999999999 79999999999999


Q ss_pred             CCcC-CCCCCCHHHHHHH--HhhCCCCCC-CCCCCCCCC---CCCCcccChHHHHH-hhhc-------------------
Q 040171          198 QDRL-ADSDMDPAFAQEL--SKACEASSG-SDDPMTNLD---RGTPTSLDSQYYNQ-TLFK-------------------  250 (329)
Q Consensus       198 ~~Rl-~dp~~d~~~~~~L--~~~Cp~~~~-~~~~~~~lD---~~tp~~FDN~Yy~~-l~~~-------------------  250 (329)
                      .+|+ +||++++.|++.|  +..||.... +. ....+|   +.||.+|||+||++ |+.+                   
T Consensus       273 ~~rl~~dp~~~~~~~~~lg~~~~c~~~~~~~~-~~sgld~~wt~tP~~fDN~Yf~~~L~~~~w~~~~spag~~qw~~~~~  351 (720)
T 1ub2_A          273 AALLGPEPEGADVEDQGLGWINKTQSGIGRNA-VTSGLEGAWTPHPTQWDNGYFAVCSLNYDWELKKNPAGAWQWEPINP  351 (720)
T ss_dssp             STTBCCCGGGSCGGGTTCCSCBCSSCCSGGGC-BSSSCCBBSSSCTTSCSSTTTTTTTSSSCEEEEECTTSCEEEEESSC
T ss_pred             hhcCCCCcccCHHHHhhhHHhhcCCCCCCCCc-cccCCCCCCCCCcccccHHHHhhhhhcccceeccCCCcccccccCCc
Confidence            9999 8999999999986  999996432 11 234455   47999999999999 8876                   


Q ss_pred             -----------------ccCccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhc--CCCCCCCCc
Q 040171          251 -----------------RGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGS--LQVLTDGQG  302 (329)
Q Consensus       251 -----------------~gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~--lgv~tg~~G  302 (329)
                                       ++||+||++|+.|++|+++|++||.|++.|+++|++||+||++  +||+||..|
T Consensus       352 ~~~~~~p~~~d~~~~~~~~ml~SD~aL~~Dp~~~~iv~~fa~d~~~F~~~Fa~Am~KL~~~d~gp~t~~~g  422 (720)
T 1ub2_A          352 REEDLPVDVEDPSIRRNLVMTDADMAMKMDPEYRKISERFYQDPAYFADVFARAWFKLTHRDMGPKARYIG  422 (720)
T ss_dssp             CGGGSCBCSSCTTSBCCBCBCHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGCBS
T ss_pred             cccccCCcccCCccccCceechhhHHHhcCCcHHHHHHHHHhCHHHHHHHHHHHHHHHhCcccCCccCCCC
Confidence                             5899999999999999999999999999999999999999999  999999998


No 16 
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3
Probab=100.00  E-value=5.4e-68  Score=549.93  Aligned_cols=272  Identities=21%  Similarity=0.283  Sum_probs=244.6

Q ss_pred             cCCCccc-cccCCccHH-HHHHHHHHHHHhhC--------CCcHHHHHHHHhhcccCC------CCCC-cceeccCCCCC
Q 040171           20 AKLTPNF-YSSSCPEAE-SIIFNVVQRRFNTD--------RSITGALLRMHFHDCFSG------NVCD-ASILIDSTIRS   82 (329)
Q Consensus        20 ~~L~~~f-Y~~sCP~~e-~iV~~~v~~~~~~~--------~~~a~~llRL~FHDcfv~------~GcD-gSill~~~~~~   82 (329)
                      ..|..+| |.++||+++ ++|++.|++.+..+        ++++|.+|||+||||||+      +||| |||++.     
T Consensus        44 ~pl~~~f~Y~~~~~~~d~~~vk~~v~~~~~~~~~~wp~d~~~~g~~liRlafHd~~t~~~sd~~gG~dggsir~~-----  118 (731)
T 1itk_A           44 GPVEDDFDYAEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADGRGGAAGGRQRFA-----  118 (731)
T ss_dssp             SSCCTTCCHHHHHHHCCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST-----
T ss_pred             CCCCCCcchhhhcchHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHhhhccccCcCCCCCCCCccccch-----
Confidence            4589999 999999998 99999999999998        599999999999999994      3888 778774     


Q ss_pred             CCCCCCCCCCCC-chhHHHHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCC---------
Q 040171           83 QPEKDSGSNLTV-RGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNAD---------  152 (329)
Q Consensus        83 ~~E~~~~~N~~L-~g~~~Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~---------  152 (329)
                       +|+++++|.+| +++++|+.||+++    |++|||||||+|||++||+.+|||.|+|++||+|++++...         
T Consensus       119 -~e~~~~~N~~l~~~~~~l~~iK~~~----~~~VS~ADli~lAg~~Av~~~Ggp~~~~~~GR~D~~~~~~~~~~g~e~~~  193 (731)
T 1itk_A          119 -PINSWPDNANLDKARRLLLPIKQKY----GQKISWADLMILAGNVAIESMGFKTFGYAGGREDAFEEDKAVNWGPEDEF  193 (731)
T ss_dssp             -TGGGCGGGTTHHHHHHHTHHHHHHH----GGGSCHHHHHHHHHHHHHHHTTCCCSCCCBCCCCCSSCCTTCCCCSCSST
T ss_pred             -hhccCccccchHHHHHHHHHHHHhc----cCCccHHHHHHHHHHHHHHHcCCCccCCCCCCCCCccccccccccccccc
Confidence             69999999998 8999999999999    68999999999999999999999999999999999887553         


Q ss_pred             ----------------------------CC--CCCCCCCCHHHHHHHHHHcCCCcccceee-cccceeccccccccCCcC
Q 040171          153 ----------------------------EV--NLPGTSLSVPNVLQMFAEKGFNTTETVVI-LGAHTVGVVHCSFFQDRL  201 (329)
Q Consensus       153 ----------------------------~~--~LP~p~~~~~~l~~~F~~~Gls~~dlVaL-sGaHTiG~~hc~~f~~Rl  201 (329)
                                                  +.  +||+|..++++|++.|++||||++||||| +||||||++||..|.+|+
T Consensus       194 ~~~~r~~~~~~l~~p~~a~~mgli~vnpeg~~~lP~P~~s~~~l~~~F~r~Gln~~E~VALisGaHTiG~ahc~~~~~r~  273 (731)
T 1itk_A          194 ETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVHGADDPEEN  273 (731)
T ss_dssp             TCCCSCSSTTCCCTTCSCSSTTCSSSCTTCGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTSCEECBSSCHHHH
T ss_pred             ccccccccccccccccccccccccccccccccCCCCCccCHHHHHHHHHHcCCCHHHHHHhhccceeccccccccchhcc
Confidence                                        11  48999999999999999999999999999 799999999999998865


Q ss_pred             --CCCCCCHHHHHHH--HhhCCCCCC-CCCCCCCCC---CCCCcccChHHHHHhhhc-----------------------
Q 040171          202 --ADSDMDPAFAQEL--SKACEASSG-SDDPMTNLD---RGTPTSLDSQYYNQTLFK-----------------------  250 (329)
Q Consensus       202 --~dp~~d~~~~~~L--~~~Cp~~~~-~~~~~~~lD---~~tp~~FDN~Yy~~l~~~-----------------------  250 (329)
                        +||++++.|++.|  +..||.... +. ....+|   +.||.+|||+||++|+.+                       
T Consensus       274 ~~~dp~~~~~~~~~lg~~~~c~~~~~~~~-~~sgld~~wt~tP~~fDN~Yf~~L~~~~w~~~~spag~~qw~~~~~~~~~  352 (731)
T 1itk_A          274 LGPEPEAAPIEQQGLGWQNKNGNSKGGEM-ITSGIEGPWTQSPTEWDMGYINNLLDYEWEPEKGPGGAWQWAPKSEELKN  352 (731)
T ss_dssp             BCCCGGGSCGGGTTCCCCBCC-------C-BSSSCCEESSSSTTSCSSHHHHHHHHSCEEEEECTTSCEEEEESSSTTTT
T ss_pred             cCCCCccCHHHHhhhHHhhcCCCCCCCCC-cccCCCCCCCCCcchhhHHHHHHHhhcccccccCCCcccccccCCccccc
Confidence              8999999999996  999996432 22 344565   479999999999999986                       


Q ss_pred             -------------ccCccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhc--CCCCCCCCc
Q 040171          251 -------------RGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGS--LQVLTDGQG  302 (329)
Q Consensus       251 -------------~gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~--lgv~tg~~G  302 (329)
                                   ++||+||++|+.|++|+++|++||.|++.|+++|++||+||++  +||+||..|
T Consensus       353 ~~p~~~d~~~~~~~~mL~SD~aL~~Dp~~~~iv~~fa~d~~~F~~~Fa~Am~KL~~~d~gp~t~~~g  419 (731)
T 1itk_A          353 SVPDAHDPDEKQTPMMLTTDIALKRDPDYREVMETFQENPMEFGMNFAKAWYKLTHRDMGPPERFLG  419 (731)
T ss_dssp             CEECSSCTTCEECCCBCHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGCBS
T ss_pred             cCCcccCCccccCceeehhhHHHhcCCcHHHHHHHHhhCHHHHHHHHHHHHHHHhccccCCccCCCC
Confidence                         5899999999999999999999999999999999999999999  999999998


No 17 
>3q3u_A Lignin peroxidase; oxidoreductase; HET: HEM; 1.85A {Trametes cervina} SCOP: a.93.1.0
Probab=100.00  E-value=2.8e-66  Score=499.59  Aligned_cols=248  Identities=23%  Similarity=0.302  Sum_probs=220.0

Q ss_pred             ccCCccHHHHHHHHHHHHHhhCCCc---HHHHHHHHhhcccC------------CCCCCcceeccCCCCCCCCCCCCCCC
Q 040171           28 SSSCPEAESIIFNVVQRRFNTDRSI---TGALLRMHFHDCFS------------GNVCDASILIDSTIRSQPEKDSGSNL   92 (329)
Q Consensus        28 ~~sCP~~e~iV~~~v~~~~~~~~~~---a~~llRL~FHDcfv------------~~GcDgSill~~~~~~~~E~~~~~N~   92 (329)
                      +.+|... +.|+++|++.+..+..+   ++.||||+||||++            .+||||||||.++    +|+++++|.
T Consensus        12 ~~~cc~~-~~V~~di~~~l~~~g~~g~~a~~lvRlafHda~Ty~~~~~~~g~~~~GGcDGSill~~~----~Ek~~~~N~   86 (338)
T 3q3u_A           12 NAACCAW-FPVLDDIQANLFNGGKCEEEAHEAVRLTFHDAVGFSLAAQKAGKFGGGGADGSILAFSD----IETAFIPNF   86 (338)
T ss_dssp             SGGGGGH-HHHHHHHHHHTSTTTCCSHHHHHHHHHHHHHHTSCCHHHHHTTSCCCCSSSSHHHHTHH----HHTTSGGGT
T ss_pred             CCcCcCH-HHHHHHHHHHHhhCCCCchHHHHHHHHHHhhhhcccccccccccCCCCCCCCeeeeCCc----ccccCcccc
Confidence            3467665 55999999999988654   56999999999994            1399999998632    599999999


Q ss_pred             CCchhHHHHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHH-hCCCCcccCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 040171           93 TVRGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVAL-AGGLNYSLPTGRLDGLRSNADEVNLPGTSLSVPNVLQMFA  171 (329)
Q Consensus        93 ~L~g~~~Id~iK~~le~~cp~~VScADilalAar~av~~-~GGP~~~v~~GR~D~~~s~~~~~~LP~p~~~~~~l~~~F~  171 (329)
                      +|+  ++|+.||..+|+.   +|||||||+|||++||+. +|||.|+|++||+|++++.+.+ +||+|..++++|++.|+
T Consensus        87 ~L~--~vi~~lk~~~e~~---~VS~ADliaLAg~~Ave~~~GGp~~~f~~GR~Da~~~~~~g-~lP~p~~~~~~L~~~F~  160 (338)
T 3q3u_A           87 GLE--FTTEGFIPFALAH---GVSFGDFVQFAGAVGAANCAGGPRLQFLAGRSNISQPSPDG-LVPDPTDSADKILARMA  160 (338)
T ss_dssp             THH--HHHHHHHHHHHHH---TCCHHHHHHHHHHHHHHTSBTCCCCCCEECCCSCCCCCCTT-CSCCTTSCHHHHHHHHH
T ss_pred             CHH--HHHHHHHHHHHHh---cCCHHHHHHHHHHHHHHHhhcCCCcCCcCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHH
Confidence            987  8999999999987   899999999999999996 7999999999999999988765 79999999999999999


Q ss_pred             HcCCCcccceeecccceeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHHHhhh-c
Q 040171          172 EKGFNTTETVVILGAHTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLF-K  250 (329)
Q Consensus       172 ~~Gls~~dlVaLsGaHTiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~-~  250 (329)
                      ++|||.+|||||+||||||++||.       ||+++                    .+++| .||.+|||+||+||+. +
T Consensus       161 ~~GL~~~EmVaLsGaHTiG~ah~~-------dp~~~--------------------g~~~d-~tP~~fDN~Yf~nLl~~~  212 (338)
T 3q3u_A          161 DIGFSPTEVVHLLASHSIAAQYEV-------DTDVA--------------------GSPFD-STPSVFDTQFFVESLLHG  212 (338)
T ss_dssp             TTTCCHHHHHHHGGGGGGCEESSS-------CGGGT--------------------TEESS-SCTTBCSTHHHHHHTBCC
T ss_pred             HcCCChHHhHhhhchhhcccccCC-------CCCcC--------------------CCcCC-CCCCcccHHHHHHHHhcc
Confidence            999999999999999999999973       44442                    13466 7999999999999985 4


Q ss_pred             cc------------------CccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCccccccccccc
Q 040171          251 RG------------------VLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIRQNCRAFN  312 (329)
Q Consensus       251 ~g------------------ll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~~C~~~n  312 (329)
                      ++                  +|+||++|+.|++|+++|+.||+||+.|+++|++||+||++|+|++    |||++|+.||
T Consensus       213 ~~~~~~~~~~~~~d~~~~~~ll~SD~~L~~d~~tr~~v~~yA~d~~~F~~dFa~Am~Kl~~lgv~~----~ir~~Cs~vn  288 (338)
T 3q3u_A          213 TQFTGSGQGGEVMSPIPGEFRLQSDFALSRDPRTACEWQALVNNQQAMVNNFEAVMSRLAVIGQIP----SELVDCSDVI  288 (338)
T ss_dssp             CBCSSCSCTTEECBSSTTCCEEHHHHHHHHSTTTHHHHHHHTTCHHHHHHHHHHHHHHHTTTTSCG----GGSEECGGGS
T ss_pred             CcCCCCCCCCccccCCCCccccccCHHhhcCHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhcCCCc----cccccCcccC
Confidence            55                  8999999999999999999999999999999999999999999976    7999999999


Q ss_pred             CCCCCC
Q 040171          313 RDNNAN  318 (329)
Q Consensus       313 ~~~~~~  318 (329)
                      |..++.
T Consensus       289 p~~~~~  294 (338)
T 3q3u_A          289 PTPPLA  294 (338)
T ss_dssp             CCCCSC
T ss_pred             CCCCCC
Confidence            877643


No 18 
>3riv_A Ascorbate peroxidase; alpha helical bundle, heme peroxidase, oxidoreductase; HET: HEM; 1.76A {Leishmania major} PDB: 3riw_A* 4ged_A*
Probab=100.00  E-value=4e-66  Score=486.97  Aligned_cols=233  Identities=27%  Similarity=0.411  Sum_probs=208.4

Q ss_pred             HHHHHHHHHHHHhhCCCcHHHHHHHHhh-----cccCCC-CCCcceeccCCCCCCCCCCCCCCCCCchhHHHHHHHHHHh
Q 040171           35 ESIIFNVVQRRFNTDRSITGALLRMHFH-----DCFSGN-VCDASILIDSTIRSQPEKDSGSNLTVRGYEIIDEIKNAVE  108 (329)
Q Consensus        35 e~iV~~~v~~~~~~~~~~a~~llRL~FH-----Dcfv~~-GcDgSill~~~~~~~~E~~~~~N~~L~g~~~Id~iK~~le  108 (329)
                      .++|++.|++++.++++++|.||||+||     |||+++ |+||+     +.++.+|+++++|.   ||++|+.+|+.+|
T Consensus         9 ~~~vr~~v~~~~~~~~~~~a~llRl~fH~a~t~dc~~~~gg~~g~-----~~~~~~E~~~~~N~---gl~~i~~~~~~i~   80 (271)
T 3riv_A            9 IRALRADIEDMISEKLELGPSLIRLAWHEAASYDCFKKDGSPNSA-----SMRFKPECLYAGNK---GLDIPRKALETLK   80 (271)
T ss_dssp             HHHHHHHHHHHHHHCTTHHHHHHHHHHHHHTTCBTTTTBSCTTTT-----GGGSTTGGGSGGGT---TTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCchHHHHHHHHHhcccCCCCCCCCCCCCcc-----cccccccccccccc---CHHHHHHHHHHHH
Confidence            4789999999999999999999999999     999862 44442     22345799999997   6799999999999


Q ss_pred             hhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCCCC--CCCCCCCCHHHHHHHHHHcCCCcccceeeccc
Q 040171          109 QKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEV--NLPGTSLSVPNVLQMFAEKGFNTTETVVILGA  186 (329)
Q Consensus       109 ~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~--~LP~p~~~~~~l~~~F~~~Gls~~dlVaLsGa  186 (329)
                      +.|| .|||||||+||||+||+++|||.|+|++||+|++++....+  +||.|+.++++|++.|+++|||.+||||||||
T Consensus        81 ~~cp-~VScADiiaLAardaV~~~gGp~~~v~~GR~D~~~s~~~~~~~~lP~p~~~~~~l~~~F~~~GL~~~emVaLsGa  159 (271)
T 3riv_A           81 KKYP-QISYADLWVLAAYVAIEYMGGPTIPFCWGRVDAKDGSVCGPDGRLPDGSKTQSHVREVFRRLGFNDQETVALIGA  159 (271)
T ss_dssp             HHCT-TSCHHHHHHHHHHHHHHHTTCCCCCCEECCCCCSSGGGCCCTTCSCCTTSCHHHHHHHHHHHTCCHHHHHHHHGG
T ss_pred             hcCC-CCCHHHHHHHHHHHHHHhccCCCcCCCCCccCcccccccCccCCCCCCCCCHHHHHHHHHHcCCCHHHHhhhccc
Confidence            9999 59999999999999999999999999999999999766555  79999999999999999999999999999999


Q ss_pred             ceeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHHHhhhcc---------------
Q 040171          187 HTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLFKR---------------  251 (329)
Q Consensus       187 HTiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~~---------------  251 (329)
                      ||||++||...                        +..+ +|    +.||.+|||+||++|+.++               
T Consensus       160 HTiG~~~~~~~------------------------~~~g-~~----~~tp~~fdn~yf~~Ll~~~w~~~~~~~~~~~~d~  210 (271)
T 3riv_A          160 HTCGECHIEFS------------------------GYHG-PW----THDKNGFDNSFFTQLLDEDWVLNPKVEQMQLMDR  210 (271)
T ss_dssp             GGSCEECHHHH------------------------SCCE-ES----SSCTTCCSTHHHHHHHHSCEEECTTCSSCCEEET
T ss_pred             eeccccccccC------------------------CCCC-CC----CCCCCccCHHHHHHHHhccCCcCCCCCccccccc
Confidence            99999999641                        1111 22    3689999999999999876               


Q ss_pred             -----cCccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCcccc
Q 040171          252 -----GVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGEIR  305 (329)
Q Consensus       252 -----gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR  305 (329)
                           |+|+||++|+.|++|+++|+.||.||+.|+++|++||+||++|+|+|+++++|-
T Consensus       211 ~t~~~~ll~SD~~L~~d~~t~~~v~~yA~~~~~F~~dFa~Am~Km~~l~v~t~~~~~~~  269 (271)
T 3riv_A          211 ATTKLMMLPSDVCLLLDPSYRKYVELYAKDNDRFNKDFANAFKKLTELGTRNLHKAPAS  269 (271)
T ss_dssp             TTSCCEECHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTTTCCSCEECCC-
T ss_pred             CCCcceeecccHHHhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCCcC
Confidence                 799999999999999999999999999999999999999999999999999985


No 19 
>3e2o_A CCP, cytochrome C peroxidase; cytochrome C peroxidase (CCP), heme, hydrogen peroxide, iron, metal-binding, mitochondrion; HET: HEM; 1.06A {Saccharomyces cerevisiae} SCOP: a.93.1.1 PDB: 4a71_A* 1z53_A* 1kok_A* 1sbm_A* 1sdq_A* 1s73_A* 1zby_A* 1zbz_A* 2b0z_A* 2b10_A* 2b11_A* 2b12_A* 2cyp_A* 2ycg_A* 4a6z_A* 2v23_A* 1ebe_A* 3r98_A* 3r99_A* 1mkr_A* ...
Probab=100.00  E-value=1.7e-62  Score=466.14  Aligned_cols=228  Identities=21%  Similarity=0.313  Sum_probs=205.4

Q ss_pred             HHHHHHHHHHHhhCC------CcHHHHHHHHhhcccCC------CCCC-cceeccCCCCCCCCCCCCCCCCC-chhHHHH
Q 040171           36 SIIFNVVQRRFNTDR------SITGALLRMHFHDCFSG------NVCD-ASILIDSTIRSQPEKDSGSNLTV-RGYEIID  101 (329)
Q Consensus        36 ~iV~~~v~~~~~~~~------~~a~~llRL~FHDcfv~------~GcD-gSill~~~~~~~~E~~~~~N~~L-~g~~~Id  101 (329)
                      +.|++.|.+.+..++      .++|.||||+||||+++      +||| |||++.      +|+++++|.+| +++++|+
T Consensus        20 ~~v~~di~~~~~~~~~~~d~~~~~~~lvRlawHda~Tyr~~d~~GGadg~~ir~~------pEk~~~~N~~L~~~~~~le   93 (294)
T 3e2o_A           20 QKVYNAIALKLREDDEYDNYIGYGPVLVRLAWHTSGTWDKHDNTGGSYGGTYRFK------KEFNDPSNAGLQNGFKFLE   93 (294)
T ss_dssp             HHHHHHHHHHHHHCTTHHHHTCSHHHHHHHHHHHHTTCBTTTTBSSSTTCGGGSH------HHHTCGGGTTTHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCcccccccchHHHHHHHHHHHhcccccCCCCCCCCcceeccc------cccCCccccchHHHHHHHH
Confidence            679999999998887      79999999999999975      3999 688875      69999999999 7999999


Q ss_pred             HHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHcCCCcccc
Q 040171          102 EIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNADEV-NLPGTSLSVPNVLQMFAEKGFNTTET  180 (329)
Q Consensus       102 ~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~~~-~LP~p~~~~~~l~~~F~~~Gls~~dl  180 (329)
                      .||+++    | +|||||||+||||+||+.+|||.|+|++||+|++++..... +||.|+.++++|++.|++||||++||
T Consensus        94 ~iK~~~----~-~VS~ADliaLAg~~AVe~~gGp~~~~~~GR~Da~~~~~~~~~~lP~p~~~~~~l~~~F~~~GLs~~Em  168 (294)
T 3e2o_A           94 PIHKEF----P-WISSGDLFSLGGVTAVQEMQGPKIPWRCGRVDTPEDTTPDNGRLPDADKDADYVRTFFQRLNMNDREV  168 (294)
T ss_dssp             HHHHHC----T-TSCHHHHHHHHHHHHHHHTTCCCCCBCCCCCCCCGGGCCCSCCSCCSSCCHHHHHHHHHTTTCCHHHH
T ss_pred             HHHHhC----C-CCCHHHHHHHHHHHHHHhccCCccCCCCCcCCCcccCCCCCCCCCCcccCHHHHHHHHHHcCCCHHHH
Confidence            999986    5 99999999999999999999999999999999998543322 69999999999999999999999999


Q ss_pred             eeecccceeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHHHhhhc----------
Q 040171          181 VVILGAHTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQTLFK----------  250 (329)
Q Consensus       181 VaLsGaHTiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l~~~----------  250 (329)
                      |||+||||||++||...                        +..+    ++| .||.+|||+||+||+..          
T Consensus       169 VaLsGaHTiG~~h~~~~------------------------g~~g----~~~-~tP~~fDN~Yf~nLl~~~w~~~~~~~~  219 (294)
T 3e2o_A          169 VALMGAHALGKTHLKRS------------------------GYEG----PWG-AANNVFTNEFYLNLLNEDWKLEKNDAN  219 (294)
T ss_dssp             HHHHGGGGSSEECHHHH------------------------SCCE----ESS-SCTTSCSSHHHHHHHHSCEEEEECTTS
T ss_pred             HHHhcccccccccccCC------------------------CCCC----CCc-CcccccchHHHHHHHhccceeccCCCC
Confidence            99999999999998531                        1111    234 69999999999999983          


Q ss_pred             ---------ccCccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhcCCCCCCCCcc
Q 040171          251 ---------RGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGSLQVLTDGQGE  303 (329)
Q Consensus       251 ---------~gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~lgv~tg~~Ge  303 (329)
                               .++|+||++|+.|++|+++|+.||.|++.|+++|++||+||+++||+++.+++
T Consensus       220 ~~~~~~~~g~~~l~sD~~L~~d~~~r~~v~~yA~d~~~F~~dFa~A~~Km~~lgv~~~~~~~  281 (294)
T 3e2o_A          220 NEQWDSKSGYMMLPTBYSLIQDPKYLSIVKEYANDQDKFFKDFSKAFEKLLENGITFPKDAP  281 (294)
T ss_dssp             CEEEEETTSCEECHHHHHHHHSHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTEECCTTSC
T ss_pred             ceEEecCCCCccCccCHHhhcChhHHHHHHHHhhCHHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence                     56999999999999999999999999999999999999999999999999887


No 20 
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15}
Probab=100.00  E-value=8e-63  Score=511.24  Aligned_cols=273  Identities=20%  Similarity=0.257  Sum_probs=241.8

Q ss_pred             cCCCccc-cccCCccHH-HHHHHHHHHHHhhCC--------CcHHHHHHHHhhcccCC------CCC-CcceeccCCCCC
Q 040171           20 AKLTPNF-YSSSCPEAE-SIIFNVVQRRFNTDR--------SITGALLRMHFHDCFSG------NVC-DASILIDSTIRS   82 (329)
Q Consensus        20 ~~L~~~f-Y~~sCP~~e-~iV~~~v~~~~~~~~--------~~a~~llRL~FHDcfv~------~Gc-DgSill~~~~~~   82 (329)
                      .+|..+| |.+.|+..+ +.|++.|++.+....        .++|.+|||+||||+++      +|| ||||+++     
T Consensus        67 ~p~~~~f~y~~~~~~~d~~avk~di~~~~~~~~~~wp~d~g~~gp~lvRlawHdagTy~~~d~~GGanggsirf~-----  141 (764)
T 3ut2_A           67 NPLGGDFDYAEAFQSLDYEAVKKDIAALMTESQDWWPADFGNYGGLFVRMAXHSAGTYRAMDGRGGGGMGQQRFA-----  141 (764)
T ss_dssp             CTTCTTCCHHHHHHTSCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST-----
T ss_pred             CCCCCCCcHHHHhhHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHhhcccccccCCCCCCCCCCCeeecc-----
Confidence            4577889 999999885 899999999998865        78999999999999874      399 6899886     


Q ss_pred             CCCCCCCCCCCC-chhHHHHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCC---------
Q 040171           83 QPEKDSGSNLTV-RGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNAD---------  152 (329)
Q Consensus        83 ~~E~~~~~N~~L-~g~~~Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~---------  152 (329)
                       +|+++++|.+| ++|++|+.||+++    |++|||||||+||||+||+.+|||.|+|++||+|++++...         
T Consensus       142 -pE~~~~~N~gL~~~~~~l~~IK~~~----p~~VScADLiaLAg~~AVe~~GGP~~~f~~GR~Da~~s~~~~~wg~e~~~  216 (764)
T 3ut2_A          142 -PLNSWPDNQNLDKARRLIWPIKQKY----GNKISWADLMLLTGNVALENMGFKTLGFGGGRADTWQSDEAVYWGAETTF  216 (764)
T ss_dssp             -TGGGCGGGTTHHHHHHHHHHHHHHH----GGGSCHHHHHHHHHHHHHHHTTCCCSCCCBCCCCCCSCCTTCCCCSCSSC
T ss_pred             -cccCCccccCHHHHHHHHHHHHHHh----cCCcCHHHHHHHHHHHHHHHcCCCccCCCCCCCCCCCCccccccCCcccc
Confidence             59999999999 7999999999998    67999999999999999999999999999999999887542         


Q ss_pred             ---------------------------------------CC-CCCCCCCCHHHHHHHHHHcCCCcccceee-cccceecc
Q 040171          153 ---------------------------------------EV-NLPGTSLSVPNVLQMFAEKGFNTTETVVI-LGAHTVGV  191 (329)
Q Consensus       153 ---------------------------------------~~-~LP~p~~~~~~l~~~F~~~Gls~~dlVaL-sGaHTiG~  191 (329)
                                                             ++ +||+|..++++|++.|++||||++||||| +||||||+
T Consensus       217 ~~~~~~~r~~~~~~~~~~~~~l~~plaa~~mgliyvnpegp~glPdP~~sa~~lr~~F~rmGlnd~E~VALisGaHTiGk  296 (764)
T 3ut2_A          217 VPQGNDVRYNNSVDINARADKLEKPLAATHMGLIYVNPEGPNGTPDPAASAKDIREAFGRMGMNDTETVALIAGGHAFGK  296 (764)
T ss_dssp             TTSCCTTTTTTCCCTTTTGGGCCTTCCSSSTTCSSSCTTCGGGCCCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSCC
T ss_pred             cccCCcccccccccccccccccccchhhhhcccccccccccCCCCCCCcCHHHHHHHHHHcCCCHHHHHHHhccCccccc
Confidence                                                   01 48999999999999999999999999999 79999999


Q ss_pred             ccccccCCcC-CCCCCCHHHHHH--HHhhCCCCCCCCCCCCCCCC---CCCcccChHHHHHhhhc---------------
Q 040171          192 VHCSFFQDRL-ADSDMDPAFAQE--LSKACEASSGSDDPMTNLDR---GTPTSLDSQYYNQTLFK---------------  250 (329)
Q Consensus       192 ~hc~~f~~Rl-~dp~~d~~~~~~--L~~~Cp~~~~~~~~~~~lD~---~tp~~FDN~Yy~~l~~~---------------  250 (329)
                      +||..|.+|| +||++++.|++.  |+..||..+........+|.   .||++|||+||++|+.+               
T Consensus       297 aHc~~~~~rl~~dP~~~~~~~~~l~~~~~c~~g~g~~~~~sgld~~wt~tP~~fDN~Yf~~Ll~~~w~~~~~p~g~~qw~  376 (764)
T 3ut2_A          297 THGAVKGSNIGPAPEAADLGMQGLGWHNSVGDGNGPNQMTSGLEVIWTKTPTKWSNGYLESLINNNWTLVESPAGAHQWE  376 (764)
T ss_dssp             CCBCSCGGGBCCCGGGSCGGGTTCCCCBCSTTSSGGGCBSSSCCCCCSSCTTSCCSHHHHHHHHSCCEEEECTTSCEEEE
T ss_pred             ccccchhhccCCCCccChHHHHhHHHHhhCCCCCCCCCccccCCCCCCCCCccccHHHHHHHhcCCcccccCCCcccccc
Confidence            9999999999 899999998886  49999965322103445664   79999999999999987               


Q ss_pred             -------------------ccCccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhc--CCCCCCCCc
Q 040171          251 -------------------RGVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGS--LQVLTDGQG  302 (329)
Q Consensus       251 -------------------~gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~--lgv~tg~~G  302 (329)
                                         ++||+||++|+.|++|+++|++||.|++.|+++|++||+||++  +|+++..-|
T Consensus       377 ~~~~~~~~p~~~~~~~~~~~~mL~SD~aL~~Dp~t~~iv~~fa~d~~~F~~~FA~A~~KL~~rdmgp~~~~~g  449 (764)
T 3ut2_A          377 AVNGTVDYPDPFDKTKFRKATMLTSDLALINDPEYLKISQRWLEHPEELADAFAKAWFKLLHRDLGPTTRYLG  449 (764)
T ss_dssp             CTTSCSCEEETTEEEEEECCEECHHHHGGGSSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGCBS
T ss_pred             cCCccccCCcccCCcccccccccccCHHHhcCchHHHHHHHHhhCHHHHHHHHHHHHHHHhccccccccccCC
Confidence                               6899999999999999999999999999999999999999997  566665444


No 21 
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A*
Probab=100.00  E-value=8.9e-63  Score=510.66  Aligned_cols=273  Identities=20%  Similarity=0.274  Sum_probs=241.1

Q ss_pred             cCCCccc-cccCCccH-HHHHHHHHHHHHhhCC--------CcHHHHHHHHhhcccCC------CCC-CcceeccCCCCC
Q 040171           20 AKLTPNF-YSSSCPEA-ESIIFNVVQRRFNTDR--------SITGALLRMHFHDCFSG------NVC-DASILIDSTIRS   82 (329)
Q Consensus        20 ~~L~~~f-Y~~sCP~~-e~iV~~~v~~~~~~~~--------~~a~~llRL~FHDcfv~------~Gc-DgSill~~~~~~   82 (329)
                      .+|..+| |.+.|+.. .+.|++.|.+.+....        .++|.+|||+||||+++      +|| ||||+++     
T Consensus        60 ~p~~~~f~y~~~~~~~D~~~vk~~I~~~~~~~~~~wp~d~g~~gp~lvRlawHdagTy~~~d~~GGa~ggsirf~-----  134 (748)
T 3n3r_A           60 DPMGKDFNYAQAFEKLDLAAVKRDLHALMTTSQDWWPADFGHYGGLFIRMAXHSAGTYRTADGRGGAGEGQQRFA-----  134 (748)
T ss_dssp             CCSCTTCCHHHHHHTSCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHHTTCCTTTCCCSSTTCGGGST-----
T ss_pred             CCCCCCCcHHHHhhHhhHHHHHHHHHHHHhcccccccccccchhHHHHHHhhcccccccCCCCCCCCCCCceecC-----
Confidence            4577889 99999887 4689999999999875        79999999999999875      399 6899885     


Q ss_pred             CCCCCCCCCCCC-chhHHHHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCC-----------
Q 040171           83 QPEKDSGSNLTV-RGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSN-----------  150 (329)
Q Consensus        83 ~~E~~~~~N~~L-~g~~~Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~-----------  150 (329)
                       +|+++++|.+| ++|++|+.||+++    |++|||||||+|||++||+++|||.|+|++||+|++++.           
T Consensus       135 -pE~~~~~N~gL~~~~~~l~~IK~~~----p~~VScADliaLAg~~AV~~~GGP~~~f~~GR~D~~~~~~~~wg~e~~~~  209 (748)
T 3n3r_A          135 -PLNSWPDNANLDKARRLLWPIKQKY----GRAISWADLLILTGNVALESMGFKTFGFAGGRADTWEPADVYWGSEKIWL  209 (748)
T ss_dssp             -TGGGCGGGTTHHHHHHHTHHHHHHH----GGGSCHHHHHHHHHHHHHHHTTCCCCCCCBCCCCCSSCCCCCCCSCSSTT
T ss_pred             -cccCCcccccHHHHHHHHHHHHHhc----cCCcCHHHHHHHHHHHHHHHcCCCccCCCCCCCCCCCCcccccCCccccc
Confidence             69999999999 7999999999998    679999999999999999999999999999999998864           


Q ss_pred             -------------------------------CCCC-CCCCCCCCHHHHHHHHHHcCCCcccceee-cccceecccccccc
Q 040171          151 -------------------------------ADEV-NLPGTSLSVPNVLQMFAEKGFNTTETVVI-LGAHTVGVVHCSFF  197 (329)
Q Consensus       151 -------------------------------~~~~-~LP~p~~~~~~l~~~F~~~Gls~~dlVaL-sGaHTiG~~hc~~f  197 (329)
                                                     +++. +||+|..++++|++.|++||||++||||| +||||||++||..|
T Consensus       210 ~~~~~~~~r~s~~~~~~~p~aa~~mgliyvnpeg~~glPdP~~~a~~lr~~F~rmGlnd~E~VALisGaHTiGkaHc~~~  289 (748)
T 3n3r_A          210 ELSGGPNSRYSGDRQLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDTFARMAMNDEETVALIAGGHTFGKTHGAGP  289 (748)
T ss_dssp             CCTTSTTCSEETTTEECTTCCSSSTTCSSSCTTSGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTSCBCCBSSC
T ss_pred             cccccccccccccccccccchhhhccccccCcccCCCCCCCCcCHHHHHHHHHHcCCCHHHHhHhhcCccccccccccch
Confidence                                           1112 49999999999999999999999999999 79999999999999


Q ss_pred             CCcC-CCCCCCHHHHHHH--HhhCCCCCCCCCCCCC---CCCCCCcccChHHHHHhhhcc--------------------
Q 040171          198 QDRL-ADSDMDPAFAQEL--SKACEASSGSDDPMTN---LDRGTPTSLDSQYYNQTLFKR--------------------  251 (329)
Q Consensus       198 ~~Rl-~dp~~d~~~~~~L--~~~Cp~~~~~~~~~~~---lD~~tp~~FDN~Yy~~l~~~~--------------------  251 (329)
                      .+|| +||++++.|++.|  +..||..+........   .|+.||++|||+||++|+.++                    
T Consensus       290 ~~rl~~dp~~~~~~~~~l~~~~~c~~g~g~~~~~sgle~~wt~tP~~fDN~Yf~~Ll~~~W~~~~~p~g~~qw~~~~~~~  369 (748)
T 3n3r_A          290 ASNVGAEPEAAGIEAQGLGWKSAYRTGKGADAITSGLEVTWTTTPTQWSHNFFENLFGYEWELTKSPAGAHQWVAKGADA  369 (748)
T ss_dssp             GGGBCCCGGGSCGGGTTCCCCBCSTTSSGGGCBSSSCCCBCCSCTTSCCSHHHHHHHHSCEEEEECTTSCEEEEETTCCS
T ss_pred             hhccCCCCCcCHHHHhhHHHhhcCCCCCCCCcccccCCCCCCCCCccccHHHHHhHhcCceeeccCCCcccccccCCccc
Confidence            9999 8999999999987  9999964321102233   356899999999999999886                    


Q ss_pred             --------------cCccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhc--CCCCCCCCc
Q 040171          252 --------------GVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGS--LQVLTDGQG  302 (329)
Q Consensus       252 --------------gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~--lgv~tg~~G  302 (329)
                                    +||+||++|+.|++|+++|++||.|++.|+++|++||+||++  +|+++..-|
T Consensus       370 ~~p~~~d~~~~~~~~mL~SD~aL~~Dp~t~~iv~~fa~d~~~F~~~FA~Am~KL~~rdmgp~~~~~g  436 (748)
T 3n3r_A          370 VIPDAFDPSKKHRPTMLTTDLSLRFDPAYEKISRRFHENPEQFADAFARAWFKLTHRDMGPRARYLG  436 (748)
T ss_dssp             CEECSSCTTCEECCEECHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGCBS
T ss_pred             cCCcccCCccccccccccccHHHhcCchHHHHHHHHhhCHHHHHHHHHHHHHHHhccCcCcccccCC
Confidence                          899999999999999999999999999999999999999997  566665544


No 22 
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A*
Probab=100.00  E-value=1.4e-62  Score=508.55  Aligned_cols=272  Identities=21%  Similarity=0.286  Sum_probs=239.3

Q ss_pred             cCCCccc-cccCCccH-HHHHHHHHHHHHhhCC--------CcHHHHHHHHhhcccCC------CCC-CcceeccCCCCC
Q 040171           20 AKLTPNF-YSSSCPEA-ESIIFNVVQRRFNTDR--------SITGALLRMHFHDCFSG------NVC-DASILIDSTIRS   82 (329)
Q Consensus        20 ~~L~~~f-Y~~sCP~~-e~iV~~~v~~~~~~~~--------~~a~~llRL~FHDcfv~------~Gc-DgSill~~~~~~   82 (329)
                      .+|..+| |.+.|... .+.|++.|++.+....        .++|.+|||+||||+++      +|| ||||+++     
T Consensus        44 ~p~~~~f~y~~~~~~~d~~~vk~di~~~~~~~~~~wpad~g~~gp~lvRlawHdagTy~~~d~~GGanggsirf~-----  118 (737)
T 3vli_A           44 GPVEDDFDYAEEFQKLDLEAVKSDLEELMTSSQDWWPADYGHYGPLFIRMAWHSAGTYRTADGRGGAAGGRQRFA-----  118 (737)
T ss_dssp             SSCCTTCCHHHHHHHCCHHHHHHHHHHHHTCCBTTBCCGGGCCHHHHHHHHHHHHTTCCTTTCCSSSTTCGGGST-----
T ss_pred             CCCCCCCChHHHhccccHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHhccccccCCCCCCCCCeEecc-----
Confidence            4577888 99888877 4899999999998864        78999999999999864      399 5899986     


Q ss_pred             CCCCCCCCCCCC-chhHHHHHHHHHHhhhCCCCCCHHHHHHHhHHHHHHHhCCCCcccCCCCCCCCCCCCC---------
Q 040171           83 QPEKDSGSNLTV-RGYEIIDEIKNAVEQKCPSTVSCADIIALATRDAVALAGGLNYSLPTGRLDGLRSNAD---------  152 (329)
Q Consensus        83 ~~E~~~~~N~~L-~g~~~Id~iK~~le~~cp~~VScADilalAar~av~~~GGP~~~v~~GR~D~~~s~~~---------  152 (329)
                       +|+++++|.+| ++|++|+.||+++    |++|||||||+||||+||+++|||.|+|++||+|++++...         
T Consensus       119 -pEk~~~~N~gL~~~~~~le~IK~~~----p~~VScADLiaLAg~~AVe~~GGP~~~f~~GR~Da~~~~~~~~wg~e~~~  193 (737)
T 3vli_A          119 -PINSWPDNANLDKARRLLLPIKQKY----GQKISWADLMILAGNVAIESMGFKTFGYAGGREDAFEEDKAVNWGPEDEF  193 (737)
T ss_dssp             -TGGGCGGGTTHHHHHHHTHHHHHHH----GGGSCHHHHHHHHHHHHHHHTTCCCSCCCBCCCCCSSCCTTCCCCSCSST
T ss_pred             -cccCCccccchHHHHHHHHHHHHhc----cCCcCHHHHHHHHHHHHHHHcCCCccCCCCCCCCCccCccccccCCcccc
Confidence             59999999999 7999999999998    67999999999999999999999999999999999887642         


Q ss_pred             -----------------------------CC-CCCCCCCCHHHHHHHHHHcCCCcccceee-cccceeccccccccCC-c
Q 040171          153 -----------------------------EV-NLPGTSLSVPNVLQMFAEKGFNTTETVVI-LGAHTVGVVHCSFFQD-R  200 (329)
Q Consensus       153 -----------------------------~~-~LP~p~~~~~~l~~~F~~~Gls~~dlVaL-sGaHTiG~~hc~~f~~-R  200 (329)
                                                   ++ +||+|..++++|++.|++||||++||||| +||||||++||..|.+ +
T Consensus       194 ~~~~r~~~~~~l~~plaa~~mgliyvnpegp~glPdP~~~~~~lr~~F~rmGlnd~E~VALisGaHTiGkaHc~~~~~~~  273 (737)
T 3vli_A          194 ETQERFDEPGEIQEGLGASVMGLIYVNPEGPDGNPDPEASAKNIRQTFDRMAMNDKETAALIAGGHTFGKVHGADDPEEN  273 (737)
T ss_dssp             TCCCSCSSTTCCCTTCSCSSTTSSSSCTTCGGGCCCHHHHHHHHHHHHHTTTCCHHHHHHHHHHHTTSCEECBSSCHHHH
T ss_pred             cccccccccccccccchhhhcccccccccccCCCCCCccCHHHHHHHHHHcCCCHHHHHHHHcCCCcCcccccccccccc
Confidence                                         11 49999999999999999999999999999 7999999999999987 4


Q ss_pred             C-CCCCCCHHHHHHH--HhhCCCCC-CCCCCCCCCC---CCCCcccChHHHHHhhhcc----------------------
Q 040171          201 L-ADSDMDPAFAQEL--SKACEASS-GSDDPMTNLD---RGTPTSLDSQYYNQTLFKR----------------------  251 (329)
Q Consensus       201 l-~dp~~d~~~~~~L--~~~Cp~~~-~~~~~~~~lD---~~tp~~FDN~Yy~~l~~~~----------------------  251 (329)
                      + +||++++.|++.|  +..||... .+. ..+.+|   +.||++|||+||++|+.++                      
T Consensus       274 ~~~dp~~~~~~~~~l~~~~~c~~g~g~~~-~~sgld~~wt~tP~~fDN~Yf~~L~~~~W~~~~~p~g~~qw~~~~~~~~~  352 (737)
T 3vli_A          274 LGPEPEAAPIEQQGLGWQNKNGNSKGGEM-ITSGIEGPWTQSPTEWDMGYINNLLDYEWEPEKGPGGAWQWAPKSEELKN  352 (737)
T ss_dssp             BCCCGGGSCGGGTTCCCCBCC---CCTTC-BSSSCCEESSSSTTSCSSHHHHHHHHSCEEEEECTTSCEEEEESSGGGTT
T ss_pred             CCCCCCcCHHHHHhhHHhhcCCCCCCCCC-ccccCCCCCCCCCcccCHHHHHhHhcCceeeccCCCcccccccCCccccc
Confidence            5 8999999999987  89999642 222 455676   5799999999999999875                      


Q ss_pred             --------------cCccchhhhccCcchHHHHhhhccChhHHHHHHHHHHHHHhc--CCCCCCCCc
Q 040171          252 --------------GVLQIDQALALDASTHDIVAHFANDEDDFQLSFANVMVKLGS--LQVLTDGQG  302 (329)
Q Consensus       252 --------------gll~SD~~L~~d~~t~~~V~~yA~d~~~F~~~Fa~Am~Km~~--lgv~tg~~G  302 (329)
                                    +||+||++|+.|++|+++|++||.||+.|+++|++||+||++  +|+++..-|
T Consensus       353 ~~p~~~d~~~~~~~~mL~SD~aL~~Dp~t~~iv~~fa~d~~~F~~~FA~A~~KL~~rdmgp~~~~~g  419 (737)
T 3vli_A          353 SVPDAHDPDEKQTPMMLTTDIALKRDPDYREVMETFQENPMEFGMNFAKAWYKLTHLDMGPPERFLG  419 (737)
T ss_dssp             CEEETTEEEEEECCCBCHHHHHHHHSHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHTTSCSGGGCBS
T ss_pred             cCCcccCCcccccccccccCHHHhcCccHHHHHHHHhhCHHHHHHHHHHHHHHHhhcccCcccccCC
Confidence                          899999999999999999999999999999999999999997  677666554


No 23 
>1u2k_A Peroxidase/catalase HPI; KATG, catalase-peroxidase, C-terminal domain, oxidoreductase; 2.00A {Escherichia coli} SCOP: a.93.1.3 PDB: 1u2l_A 1u2j_A
Probab=100.00  E-value=5.4e-59  Score=445.02  Aligned_cols=220  Identities=15%  Similarity=0.209  Sum_probs=194.8

Q ss_pred             HHHHHHHHHHHhhCCCcHHHHHHHHhhcccCCC------CCCc-ceeccCCCCCCCCCCCCCCCCC-chhHHHHHHHHHH
Q 040171           36 SIIFNVVQRRFNTDRSITGALLRMHFHDCFSGN------VCDA-SILIDSTIRSQPEKDSGSNLTV-RGYEIIDEIKNAV  107 (329)
Q Consensus        36 ~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~~------GcDg-Sill~~~~~~~~E~~~~~N~~L-~g~~~Id~iK~~l  107 (329)
                      +...+.|++.+.+++.++|+||||+||||+|++      |||| ||+++      +|+++++|.++ ++|++|+.||++ 
T Consensus        30 ~~di~~l~~~i~~~~~~~a~llRlafHDc~t~~~sd~~gG~nGa~ir~~------~Ek~~~~N~~~~~~~~~le~iK~~-  102 (309)
T 1u2k_A           30 EQDIIDLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLALM------PQRDWDVNAAAVRALPVLEKIQKE-  102 (309)
T ss_dssp             HHHHHHHHHHHHTSCCCHHHHHHHHHHHHTTCCTTCSSCSSTBCGGGST------TGGGCGGGTTHHHHHHHHHHHHHH-
T ss_pred             HHHHHHHHHHHHHCCCcHHHHHhhcccccccccCcCCCCCCCcccccCc------hhccccCCCcchhHHHHHHHHHHc-
Confidence            335678899999999999999999999999843      6666 56554      69999999988 899999999998 


Q ss_pred             hhhCCCCCCHHHHHHHhHHHHHHHhCC-----CCcccCCCCCCCCCCCCCCC----CCCCCC------------CCHHHH
Q 040171          108 EQKCPSTVSCADIIALATRDAVALAGG-----LNYSLPTGRLDGLRSNADEV----NLPGTS------------LSVPNV  166 (329)
Q Consensus       108 e~~cp~~VScADilalAar~av~~~GG-----P~~~v~~GR~D~~~s~~~~~----~LP~p~------------~~~~~l  166 (329)
                         || +|||||||+||||+||+++||     |.|+|++||+|++++.....    .+|.|+            .++++|
T Consensus       103 ---~p-~VScADiiaLAg~~AV~~~gG~~G~~p~~~v~~GR~D~~~~~~~~~~~~~llP~~~g~~n~~~~~~~~~~~~~L  178 (309)
T 1u2k_A          103 ---SG-KASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDIEMFELLEPIADGFRNYRARLDVSTTESLL  178 (309)
T ss_dssp             ---HC-SSCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCGGGSCHHHHHTTCCSEETTTTEECSCCSSCHHHHH
T ss_pred             ---CC-CccHHHHHHHHHHHHHHHHHHhcCCccccCCCCCCCCCccccccccccccCCCCcccccccccccccCCCHHHH
Confidence               88 999999999999999999998     99999999999999874311    379885            668899


Q ss_pred             HHHHHHcCCCcccceeecccc-eeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHH
Q 040171          167 LQMFAEKGFNTTETVVILGAH-TVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYN  245 (329)
Q Consensus       167 ~~~F~~~Gls~~dlVaLsGaH-TiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~  245 (329)
                      ++.|+++|||.+||||||||| |||++||.++                          .+ +|    +.||.+|||+||+
T Consensus       179 ~~~F~~~GLt~~emVaLsGah~tiG~~hc~s~--------------------------~g-~~----~~tP~~fDN~yf~  227 (309)
T 1u2k_A          179 IDKAQQLTLTAPEMTALVGGMRVLGANFDGSK--------------------------NG-VF----TDRVGVLSNDFFV  227 (309)
T ss_dssp             HHHHHHTTCCHHHHHHHHHHHHHHTCCTTCCC--------------------------TT-CC----CSSTTSCCSHHHH
T ss_pred             HHHHHHcCCCHHHHHhhcccceeeeeecccCC--------------------------CC-CC----CCCCceechHHHH
Confidence            999999999999999999997 9999999752                          11 22    3699999999999


Q ss_pred             Hhhh----------cccCc---------------cchhhhccCcchHHHHhhhccC--hhHHHHHHHHHHHHHhcCCCC
Q 040171          246 QTLF----------KRGVL---------------QIDQALALDASTHDIVAHFAND--EDDFQLSFANVMVKLGSLQVL  297 (329)
Q Consensus       246 ~l~~----------~~gll---------------~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~lgv~  297 (329)
                      ||+.          ++|+|               +||++|+.|++|+++|+.||.|  |+.|+++|++||+||++|+..
T Consensus       228 nLl~~~~~w~~~~~~~gl~~~~d~~tg~~~~~~~~sD~~L~~d~~~r~~v~~yA~d~~~~~F~~dFa~A~~Km~~l~rf  306 (309)
T 1u2k_A          228 NLLDMRYEWKATDESKELFEGRDRETGEVKFTASRADLVFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNLDRF  306 (309)
T ss_dssp             HHHCTTEEEEESSTTCCEEEEEETTTCCEEEEEEHHHHHHHHSHHHHHHHHHHTSSSCHHHHHHHHHHHHHHHHTTTSS
T ss_pred             HHHhcccccccCCCCCcceeeecCCCcceecccChhhhhhhcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHccCCC
Confidence            9999          67888               9999999999999999999999  999999999999999999864


No 24 
>2cca_A Peroxidase/catalase T; oxidoreductase, catalase-peroxidase, KATG, heme, hydrogen peroxide, iron, metal-binding, organic radical; HET: HEM; 2.0A {Mycobacterium tuberculosis} SCOP: a.93.1.3 a.93.1.3 PDB: 1sj2_A* 2ccd_A*
Probab=100.00  E-value=1.5e-55  Score=457.49  Aligned_cols=222  Identities=16%  Similarity=0.229  Sum_probs=199.2

Q ss_pred             HHHHHHHHhhCCCcHHHHHHHHhhcccCC------CCCCc-ceeccCCCCCCCCCCCCCCC---CC-chhHHHHHHHHHH
Q 040171           39 FNVVQRRFNTDRSITGALLRMHFHDCFSG------NVCDA-SILIDSTIRSQPEKDSGSNL---TV-RGYEIIDEIKNAV  107 (329)
Q Consensus        39 ~~~v~~~~~~~~~~a~~llRL~FHDcfv~------~GcDg-Sill~~~~~~~~E~~~~~N~---~L-~g~~~Id~iK~~l  107 (329)
                      .+.|++.+.+++.++++||||+||||||+      +|||| ||+|+      +|+++++|.   +| ++|++|+.||+++
T Consensus       455 i~~lk~~i~~~~~~~a~LlRlafHDc~tfr~sd~~GGcDGasI~L~------~Ek~~~~N~p~N~L~~~~~~le~IK~~~  528 (740)
T 2cca_A          455 IASLKSQIRASGLTVSQLVSTAWAAASSFRGSDKRGGANGGRIRLQ------PQVGWEVNDPDGDLRKVIRTLEEIQESF  528 (740)
T ss_dssp             HHHHHHHHHTTTCCHHHHHHHHHHHHTTCBTTTTBCSSTBCGGGST------TGGGCSTTCTTTTHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCcHHHHHHHHHHHhccccCCCCCCCCCCceeecc------cccccccccchhhHHHHHHHHHHHHHHH
Confidence            48999999999999999999999999993      39999 89997      588898887   78 8999999999999


Q ss_pred             hhhCC--CCCCHHHHHHHhHHHHHHHhCC-----CCcccCCCCCCCCCCCCCCC---C-CCCCC------------CCHH
Q 040171          108 EQKCP--STVSCADIIALATRDAVALAGG-----LNYSLPTGRLDGLRSNADEV---N-LPGTS------------LSVP  164 (329)
Q Consensus       108 e~~cp--~~VScADilalAar~av~~~GG-----P~~~v~~GR~D~~~s~~~~~---~-LP~p~------------~~~~  164 (329)
                      |+.||  ++|||||||+||||+||+++||     |.|+|++||+|++++.....   . +|.|+            .+++
T Consensus       529 e~~c~~~~~VScADiiaLAg~~AVe~agG~~G~~p~vp~~~GR~Da~~~~~d~~sf~~llP~~dgf~n~~~~~~~~~~~~  608 (740)
T 2cca_A          529 NSAAPGNIKVSFADLVVLGGCAAIEKAAKAAGHNITVPFTPGRTDASQEQTDVESFAVLEPKADGFRNYLGKGNPLPAEY  608 (740)
T ss_dssp             HHHCCTTBCCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCGGGSCHHHHGGGCCSEEGGGTEECSCCSSCHHH
T ss_pred             hhhccCCCCCCHHHHHHHHHHHHHHHHHhccCCCCcccCCCCCCCCccccccccccccCCCCCccccccccccccCCcHH
Confidence            99975  8999999999999999999998     99999999999999874211   2 78885            4589


Q ss_pred             HHHHHHHHcCCCcccceeecccc-eeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHH
Q 040171          165 NVLQMFAEKGFNTTETVVILGAH-TVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQY  243 (329)
Q Consensus       165 ~l~~~F~~~Gls~~dlVaLsGaH-TiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Y  243 (329)
                      +|++.|+++|||.+|||||+||| |||+.||.+.                          .+ +   + +.||.+|||+|
T Consensus       609 ~L~~~F~~~GLt~~EmVaLsGaH~tlG~~hc~s~--------------------------~G-~---~-t~tP~~fDN~y  657 (740)
T 2cca_A          609 MLLDKANLLTLSAPEMTVLVGGLRVLGANYKRLP--------------------------LG-V---F-TEASESLTNDF  657 (740)
T ss_dssp             HHHHHHHHTTCCHHHHHHHHHHHHHTTCSGGGCC--------------------------TT-C---C-CSSTTSCCSHH
T ss_pred             HHHHHHHHcCCCHHHHHHHhccceeeccccCCCC--------------------------CC-C---C-CCCCCcCCcHH
Confidence            99999999999999999999999 9999999641                          01 2   2 36999999999


Q ss_pred             HHHhhhc----------ccCc--------------cchhhhccCcchHHHHhhhccC--hhHHHHHHHHHHHHHhcCCCC
Q 040171          244 YNQTLFK----------RGVL--------------QIDQALALDASTHDIVAHFAND--EDDFQLSFANVMVKLGSLQVL  297 (329)
Q Consensus       244 y~~l~~~----------~gll--------------~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~lgv~  297 (329)
                      |+||+.+          +|+|              +||++|+.|++|+++|+.||.|  ++.|+++|++||+||++|+..
T Consensus       658 F~nLl~~~~~w~~~~~~~gl~eg~d~tg~~k~~~~~sD~~L~sd~~tr~~ve~YA~dd~~~~F~~dFa~Am~Km~~l~r~  737 (740)
T 2cca_A          658 FVNLLDMGITWEPSPADDGTYQGKDGSGKVKWTGSRVDLVFGSNSELRALVEVYGADDAQPKFVQDFVAAWDKVMNLDRF  737 (740)
T ss_dssp             HHHHTCTTCEEEECSSCSSEEEEECTTSCEEEEEEHHHHHHHHSHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHTTTCG
T ss_pred             HHHHHhcccccccCCCCCCceeeecCCCceeeccChhhHhhhcCHHHHHHHHHHhccCcHhHHHHHHHHHHHHHHccCCC
Confidence            9999997          6887              8999999999999999999999  999999999999999999863


No 25 
>1itk_A Catalase-peroxidase; heme protein, oxidoreductase; HET: HEM; 2.00A {Haloarcula marismortui} SCOP: a.93.1.3 a.93.1.3
Probab=100.00  E-value=1.3e-54  Score=449.92  Aligned_cols=224  Identities=15%  Similarity=0.205  Sum_probs=198.7

Q ss_pred             HHHHHHHHHHHhhCCCcHHHHHHHHhhcccCCC------CCCc-ceeccCCCCCCCCCCCCCCC--CC-chhHHHHHHHH
Q 040171           36 SIIFNVVQRRFNTDRSITGALLRMHFHDCFSGN------VCDA-SILIDSTIRSQPEKDSGSNL--TV-RGYEIIDEIKN  105 (329)
Q Consensus        36 ~iV~~~v~~~~~~~~~~a~~llRL~FHDcfv~~------GcDg-Sill~~~~~~~~E~~~~~N~--~L-~g~~~Id~iK~  105 (329)
                      +...+.|++.+.+++.++++||||+|||||+++      |||| ||++.      +|+++++|.  +| ++|++|+.||+
T Consensus       443 ~~di~~lk~~i~~~~~~~a~LvRlafHDc~t~d~sD~~GGanGasIrl~------~Ek~~~~N~p~~L~r~~~vle~IK~  516 (731)
T 1itk_A          443 DEEIAELKEEILDSDLSVSQLVKTAWASASTYRDSDKRGGANGARLRLE------PQKNWEVNEPEQLETVLGTLENIQT  516 (731)
T ss_dssp             HHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTCBTTTTBCCSTBCGGGST------TGGGCGGGCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcccccCCCCCCCccceecc------cccccccccchHHHHHHHHHHHHHH
Confidence            445788999999999999999999999999843      5555 66664      699999998  67 89999999999


Q ss_pred             HHhhhC--CCCCCHHHHHHHhHHHHHHHhC---C--CCcccCCCCCCCCCCCCCCC----CCCCCC------------CC
Q 040171          106 AVEQKC--PSTVSCADIIALATRDAVALAG---G--LNYSLPTGRLDGLRSNADEV----NLPGTS------------LS  162 (329)
Q Consensus       106 ~le~~c--p~~VScADilalAar~av~~~G---G--P~~~v~~GR~D~~~s~~~~~----~LP~p~------------~~  162 (329)
                      ++|+.|  |++|||||||+||||+||+++|   |  |.|+|++||+|++++.....    .+|.|+            .+
T Consensus       517 ~~e~~c~c~~~VScADiiaLAgr~AVe~ag~~~G~~p~vp~~~GR~Da~~s~td~~sf~~llP~pdgfrn~~~~~~~~~~  596 (731)
T 1itk_A          517 EFNDSRSDGTQVSLADLIVLGGNAAVEQAAANAGYDVEIPFEPGRVDAGPEHTDAPSFDALKPKVDGVRNYIQDDITRPA  596 (731)
T ss_dssp             HHHHHCCSSBCCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCGGGCCHHHHGGGCCSEETTTTEECTTCSSCH
T ss_pred             HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCCCccccCCCCCCccccccccccccCCCCCCccccccccccccCCC
Confidence            999985  6899999999999999999999   8  99999999999999854211    389886            56


Q ss_pred             HHHHHHHHHHcCCCcccceeecccc-eeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccCh
Q 040171          163 VPNVLQMFAEKGFNTTETVVILGAH-TVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDS  241 (329)
Q Consensus       163 ~~~l~~~F~~~Gls~~dlVaLsGaH-TiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN  241 (329)
                      +++|++.|+++|||.+||||||||| |||++||.+|.                       +    +   +| .||.+|||
T Consensus       597 ~~~L~~~F~~~GLt~~EmVaLsGaH~tlG~~hc~s~~-----------------------G----~---~t-~tP~~fDN  645 (731)
T 1itk_A          597 EEVLVDNADLLNLTASELTALIGGMRSIGANYQDTDL-----------------------G----V---FT-DEPETLTN  645 (731)
T ss_dssp             HHHHHHHHHHTTCCHHHHHHHHHHHHHHCCCGGGCCT-----------------------T----C---CC-SSTTCCSS
T ss_pred             HHHHHHHHHHCCCCHHHHHHHhccceecccccCcCCC-----------------------C----C---CC-CCCcccch
Confidence            8999999999999999999999998 99999998751                       1    2   23 69999999


Q ss_pred             HHHHHhhhc----------ccCc---------------cchhhhccCcchHHHHhhhccC--hhHHHHHHHHHHHHHhcC
Q 040171          242 QYYNQTLFK----------RGVL---------------QIDQALALDASTHDIVAHFAND--EDDFQLSFANVMVKLGSL  294 (329)
Q Consensus       242 ~Yy~~l~~~----------~gll---------------~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~l  294 (329)
                      +||+||+.+          +|+|               +||++|+.|++|+++|+.||.|  ++.|+++|++||+||++|
T Consensus       646 ~Yf~nLl~~~~~W~~~~~~~gl~e~~dr~tg~~k~~~~~sD~~L~sd~~tr~~ve~YA~dd~~~~F~~dFa~Am~Km~~l  725 (731)
T 1itk_A          646 DFFVNLLDMGTEWEPAADSEHRYKGLDRDTGEVKWEATRIDLIFGSNDRLRAISEVYGSADAEKKLVHDFVDTWSKVMKL  725 (731)
T ss_dssp             HHHHHHHCTTEEEEECTTCSSEEEEEETTTCCEEEEEEHHHHGGGTSHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHhcccccccCCCCCCceeeecCCCcceecccCHhhHhhhcCHhHHHHHHHHhccCcHHHHHHHHHHHHHHHhcc
Confidence            999999997          6777               8999999999999999999999  899999999999999999


Q ss_pred             CC
Q 040171          295 QV  296 (329)
Q Consensus       295 gv  296 (329)
                      +.
T Consensus       726 ~~  727 (731)
T 1itk_A          726 DR  727 (731)
T ss_dssp             TC
T ss_pred             CC
Confidence            85


No 26 
>3rrw_A Thylakoid lumenal 29 kDa protein, chloroplastic; chloroplast thylakoid lumen, plant protein; 2.50A {Arabidopsis thaliana}
Probab=100.00  E-value=2.1e-54  Score=403.87  Aligned_cols=199  Identities=23%  Similarity=0.354  Sum_probs=184.1

Q ss_pred             cCCccHHHHHHHHHHHHHhhCCCcHHHHHHHHhhccc-------CCCCCCcceeccCCCCCCCCCCCCCCCCC-chhHHH
Q 040171           29 SSCPEAESIIFNVVQRRFNTDRSITGALLRMHFHDCF-------SGNVCDASILIDSTIRSQPEKDSGSNLTV-RGYEII  100 (329)
Q Consensus        29 ~sCP~~e~iV~~~v~~~~~~~~~~a~~llRL~FHDcf-------v~~GcDgSill~~~~~~~~E~~~~~N~~L-~g~~~I  100 (329)
                      ..||++|+||++.|++++..+|+++|.||||+||||+       ++ ||||||+|+      +|+++++|.+| +++++|
T Consensus         8 ~~~~~~~~iV~~~v~~~~~~~~~~a~~llRLafHDc~Ty~~~~~~g-GcDGSIll~------~E~~~~~N~gL~~~~~~l   80 (268)
T 3rrw_A            8 RQRSEFQSKIKILLSTTIKAKPELVPSLLKLALNDAMTYDKATKSG-GANGSIRFS------SELSRAENEGLSDGLSLI   80 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCBTTTTBC-SSSSGGGSH------HHHTSGGGTTCHHHHHHH
T ss_pred             hccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHhhcCcCCCCCCC-CCCeeeeeh------hhccCcccccHHHHHHHH
Confidence            4689999999999999999999999999999999999       56 999999997      69999999999 899999


Q ss_pred             HHHHHHHhhhCCC-CCCHHHHHHHhHHHHHH---------HhCCCC---------------c---ccCCCCCCCCCCCCC
Q 040171          101 DEIKNAVEQKCPS-TVSCADIIALATRDAVA---------LAGGLN---------------Y---SLPTGRLDGLRSNAD  152 (329)
Q Consensus       101 d~iK~~le~~cp~-~VScADilalAar~av~---------~~GGP~---------------~---~v~~GR~D~~~s~~~  152 (329)
                      +.||+++|+.||+ +|||||||+|||++||+         .+|||.               |   +|++||+|++.+.+.
T Consensus        81 ~~iK~~~e~~cpg~~VS~ADliaLAa~~AV~~~~~~~ai~~~GGp~i~g~~l~~~~gs~~~w~~~~v~~GR~D~~~~~~~  160 (268)
T 3rrw_A           81 EEVKKEIDSISKGGPISYADIIQLAGQSAVKFTYLASAIRKCGGNEEKGNLLYTAYGSAGQWGLFDRNFGRSDATEADPE  160 (268)
T ss_dssp             HHHHHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHSCSGGGGHHHHHCCCCCCCSSCCCS
T ss_pred             HHHHHHHHhhCCCCCCCHHHHHHHHHHHHHhhhhhhhHHHhcCCCcccccccccccccccccccCcCcCCCcCCCccCcc
Confidence            9999999999999 99999999999999887         899998               5   899999999988665


Q ss_pred             CCCCCCCC-CCHHHHHHHHHHcCCCcccceeecccceeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCC
Q 040171          153 EVNLPGTS-LSVPNVLQMFAEKGFNTTETVVILGAHTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNL  231 (329)
Q Consensus       153 ~~~LP~p~-~~~~~l~~~F~~~Gls~~dlVaLsGaHTiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~l  231 (329)
                      . +||+|+ .++++|++.|+++||+++|||+|||.                                     .+ +|   
T Consensus       161 g-~LP~p~~~~~~~l~~~F~~~Gl~~~dlVaLsGf-------------------------------------~g-p~---  198 (268)
T 3rrw_A          161 G-RVPQWGKATVQEMKDKFIAVGLGPRQLAVMSAF-------------------------------------LG-PD---  198 (268)
T ss_dssp             S-CSCCGGGCCHHHHHHHHHHTTCCHHHHHHTGGG-------------------------------------GC-SC---
T ss_pred             c-CCCCCCcCCHHHHHHHHHHcCCChhhceeeecc-------------------------------------CC-CC---
Confidence            4 899998 69999999999999999999999981                                     01 22   


Q ss_pred             CCCCCcccChHHHHHhhhcccCccchhhhccCcchHHHHhhhccC-----hhHHHHHHHHHHHHHhcCCCC
Q 040171          232 DRGTPTSLDSQYYNQTLFKRGVLQIDQALALDASTHDIVAHFAND-----EDDFQLSFANVMVKLGSLQVL  297 (329)
Q Consensus       232 D~~tp~~FDN~Yy~~l~~~~gll~SD~~L~~d~~t~~~V~~yA~d-----~~~F~~~Fa~Am~Km~~lgv~  297 (329)
                                           .|+||++|++|++++++|++||.|     |+.||.+|++||+||+++|+.
T Consensus       199 ---------------------~l~sD~~L~~Dp~~~~~V~~YA~d~~t~~q~~Ff~DFa~a~~KL~~lG~~  248 (268)
T 3rrw_A          199 ---------------------QAATEQLLATDPQVAPWVQKYQRSRETVSQTDYEVDLITAFTKLSCLGQQ  248 (268)
T ss_dssp             ---------------------HHHHHHHHTTSTTTHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHTTTCC
T ss_pred             ---------------------ccHHHHHHHcChhHHHHHHHHhcCcccccHHHHHHHHHHHHHHHHHcCCC
Confidence                                 289999999999999999999999     779999999999999999983


No 27 
>1ub2_A Catalase-peroxidase; KATG, cyanobacteria, oxidoreductase; HET: HEM; 2.40A {Synechococcus elongatus} SCOP: a.93.1.3 a.93.1.3
Probab=100.00  E-value=1e-53  Score=442.69  Aligned_cols=215  Identities=17%  Similarity=0.236  Sum_probs=193.2

Q ss_pred             HHHHHHHhhCCCcHHHHHHHHhhcccCC------CCCCc-ceeccCCCCCCCCCCCCCCC--CC-chhHHHHHHHHHHhh
Q 040171           40 NVVQRRFNTDRSITGALLRMHFHDCFSG------NVCDA-SILIDSTIRSQPEKDSGSNL--TV-RGYEIIDEIKNAVEQ  109 (329)
Q Consensus        40 ~~v~~~~~~~~~~a~~llRL~FHDcfv~------~GcDg-Sill~~~~~~~~E~~~~~N~--~L-~g~~~Id~iK~~le~  109 (329)
                      +.|++++.+++.++++||||+||||||+      +|||| ||+|+      +|+++++|.  +| ++|++|+.||+++| 
T Consensus       446 ~~vk~~i~~~~~~~a~LlRlafHDc~v~rg~D~~gGadGasI~l~------~Ek~~~~N~~~~l~r~~~vle~IKa~~e-  518 (720)
T 1ub2_A          446 QAVKDRIAASGLSISELVSTAWDSARTYRNSDKRGGANGARIRLA------PQKDWEGNEPDRLPKVLAVLEGISAATG-  518 (720)
T ss_dssp             HHHHHHHHHSCCCHHHHHHHHHHHHTTCBTTTTBCSSTBTGGGST------TGGGCGGGCTTHHHHHHHHHHHHHHHSS-
T ss_pred             HHHHHHHHhCCCcHHHHHHHHHhHhccccCCCCCCCCCCcceecc------cccccccccchHHHHHHHHHHHHHHHcC-
Confidence            8899999999999999999999999994      26667 78876      699999998  46 89999999999997 


Q ss_pred             hCCCCCCHHHHHHHhHHHHHHHhC---C--CCcccCCCCCCCCCCCCCCC---CC-CC------------CCCCHHHHHH
Q 040171          110 KCPSTVSCADIIALATRDAVALAG---G--LNYSLPTGRLDGLRSNADEV---NL-PG------------TSLSVPNVLQ  168 (329)
Q Consensus       110 ~cp~~VScADilalAar~av~~~G---G--P~~~v~~GR~D~~~s~~~~~---~L-P~------------p~~~~~~l~~  168 (329)
                           |||||||+||||+||+++|   |  |.|+|++||+|++++.....   +| |.            |+.++++|++
T Consensus       519 -----VScADiiaLAar~AV~~ag~~~G~~p~~~v~~GR~Da~~s~~d~~s~~~LeP~~dgfl~~~~~~~~~~~~~~Li~  593 (720)
T 1ub2_A          519 -----ATVADVIVLAGNVGVEQKARAAGVEIVLPFAPGRGDATAEQTDTESFAVLEPIHDAIATGSSRTMRQRLKNCCLI  593 (720)
T ss_dssp             -----CCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCSTTCCTTTTGGGCCSEEGGGTEESSCCSSCHHHHHHH
T ss_pred             -----CCHHHHHHHHHHHHHHHHHHhcCCCccccCCCCCCCCcccccccccccCCCCCCccccccccccccccCHHHHHH
Confidence                 9999999999999999999   9  99999999999999875321   46 76            4678899999


Q ss_pred             HHHHcCCCcccceeecc-cceeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHHHh
Q 040171          169 MFAEKGFNTTETVVILG-AHTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYNQT  247 (329)
Q Consensus       169 ~F~~~Gls~~dlVaLsG-aHTiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~~l  247 (329)
                      .|+++|||.+||||||| +||||++||.+|.                       +    +   ++ .||.+|||+||+||
T Consensus       594 ~F~~~GLt~~EmVaLsGg~HtiG~~hc~sf~-----------------------g----~---~t-~tP~~fDN~Yf~nL  642 (720)
T 1ub2_A          594 ATQLLGLTAPEMTVLIGGLRVLGTNHGGTKH-----------------------V----V---FT-DREGVLTNDFFVNL  642 (720)
T ss_dssp             HHHHHTCCHHHHHHHHHHHHHTTCCGGGCCT-----------------------T----C---CC-SCTTSCCSHHHHHH
T ss_pred             HHHHcCCCHHHHhhhcccccccccccccccC-----------------------C----C---CC-CCCCcCchHHHHHH
Confidence            99999999999999999 5999999998751                       1    2   23 69999999999999


Q ss_pred             hhcc--------cC---------------ccchhhhccCcchHHHHhhhccC--hhHHHHHHHHHHHHHhcCCCC
Q 040171          248 LFKR--------GV---------------LQIDQALALDASTHDIVAHFAND--EDDFQLSFANVMVKLGSLQVL  297 (329)
Q Consensus       248 ~~~~--------gl---------------l~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~lgv~  297 (329)
                      +.++        |+               |+||++|+.|++|+.+|+.||.|  ++.|+++|++||+||++|+..
T Consensus       643 l~~~~~w~~~~~gl~e~~dr~tg~~k~~~l~sD~~L~sd~~tr~~ve~yA~dd~~~~F~~dFa~Am~Km~~l~~~  717 (720)
T 1ub2_A          643 TDMNYLWKPAGKNLYEICDRKTNQVKWTATRVDLVFGSNSILRAYSELYAQDDNKEKFVRDFVAAWTKVMNADRF  717 (720)
T ss_dssp             TCTTEEEEECSTTCEEEEETTTCCEEEEECHHHHGGGTSHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHTTTCT
T ss_pred             HhCCcccccCCCCcceeeccCCCceeeeechhhhhhhcCHhHHHHHHHHhccCcHHHHHHHHHHHHHHHhccCCC
Confidence            9988        87               99999999999999999999998  999999999999999999863


No 28 
>3vli_A Catalase-peroxidase 2; oxidoreductase; HET: HEM; 1.70A {Haloarcula marismortui} PDB: 3vlh_A* 3vlj_A* 3vlk_A* 3vll_A* 3uw8_A* 3vlm_A* 1itk_A*
Probab=100.00  E-value=7.7e-53  Score=435.93  Aligned_cols=222  Identities=14%  Similarity=0.212  Sum_probs=198.1

Q ss_pred             HHHHHHHhhCCCcHHHHHHHHhhcccCC------CCCCc-ceeccCCCCCCCCCCCCCCC--CC-chhHHHHHHHHHHhh
Q 040171           40 NVVQRRFNTDRSITGALLRMHFHDCFSG------NVCDA-SILIDSTIRSQPEKDSGSNL--TV-RGYEIIDEIKNAVEQ  109 (329)
Q Consensus        40 ~~v~~~~~~~~~~a~~llRL~FHDcfv~------~GcDg-Sill~~~~~~~~E~~~~~N~--~L-~g~~~Id~iK~~le~  109 (329)
                      +.+++.+......++.||||+||||.++      +|||| ||+|.      +|+++++|.  +| ++|++|+.||+++|+
T Consensus       447 ~~lk~~~~~~g~~~~~lvRlAwhdA~Tf~~sd~~GGanGasIrl~------pEk~~~~N~p~gL~~~~~vle~IK~~~e~  520 (737)
T 3vli_A          447 AELKEEILDSDLSVSQLVKTAWASASTYRDSDKRGGANGARLRLE------PQKNWEVNEPEQLETVLGTLENIQTEFND  520 (737)
T ss_dssp             HHHHHHHHHSSCCHHHHHHHHHHHHTTCBTTTTBCSSTBCGGGST------TGGGCGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCHHHHHHHHHhhcccccccCCcCCCCcceEEec------ccccccCcchhHHHHHHHHHHHHHHHHHh
Confidence            4567778888889999999999999875      39998 99886      699999998  77 799999999999999


Q ss_pred             hCC--CCCCHHHHHHHhHHHHHHHhC-----CCCcccCCCCCCCCCCCCCCC---C-CCCCC------------CCHHHH
Q 040171          110 KCP--STVSCADIIALATRDAVALAG-----GLNYSLPTGRLDGLRSNADEV---N-LPGTS------------LSVPNV  166 (329)
Q Consensus       110 ~cp--~~VScADilalAar~av~~~G-----GP~~~v~~GR~D~~~s~~~~~---~-LP~p~------------~~~~~l  166 (329)
                      .||  ++|||||||+||||+||+++|     ||.|+|++||+|++++.....   + +|.|+            .++++|
T Consensus       521 ~c~~~~~VScADlIaLAg~~AVe~ag~~~g~GP~vpf~~GR~Da~~~~td~~s~~~LlP~pdgfrny~~~~~~~~~~~~L  600 (737)
T 3vli_A          521 SRSDGTQVSLADLIVLGGNAAVEQAAANAGYDVEIPFEPGRVDAGPEHTDAPSFDALKPKVDGVRNYIQDDITRPAEEVL  600 (737)
T ss_dssp             HCCSSBCCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCGGGCCHHHHGGGCCSEETTTTEECTTCSSCHHHHH
T ss_pred             hcCCCCcccHHHHHHHHHHHHHHHhhhhcCCCCcccccCCCcCCCccCccccccccCCCCCccccccccccccCCcHHHH
Confidence            997  589999999999999999999     999999999999999864321   2 59886            569999


Q ss_pred             HHHHHHcCCCcccceeecccc-eeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHH
Q 040171          167 LQMFAEKGFNTTETVVILGAH-TVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYN  245 (329)
Q Consensus       167 ~~~F~~~Gls~~dlVaLsGaH-TiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~  245 (329)
                      ++.|+++|||.+|||||+||| |||++||.++                          .+ +   + +.||.+|||+||+
T Consensus       601 id~F~~~GLs~~EmVaLsGaH~TlG~~hc~s~--------------------------~G-~---~-t~tP~~FDN~YF~  649 (737)
T 3vli_A          601 VDNADLLNLTASELTALIGGMRSIGANYQDTD--------------------------LG-V---F-TDEPETLTNDFFV  649 (737)
T ss_dssp             HHHHHHTTCCHHHHHHHHHHHHHHCCCGGGCC--------------------------TT-C---C-CSSTTSCCSHHHH
T ss_pred             HHHHHHcCCCHHHHHHhhcchhhcccccccCC--------------------------CC-C---C-CCCCCccCHHHHH
Confidence            999999999999999999998 9999999642                          11 2   2 3799999999999


Q ss_pred             Hhhhc----------ccCc---------------cchhhhccCcchHHHHhhhccC--hhHHHHHHHHHHHHHhcCCCCC
Q 040171          246 QTLFK----------RGVL---------------QIDQALALDASTHDIVAHFAND--EDDFQLSFANVMVKLGSLQVLT  298 (329)
Q Consensus       246 ~l~~~----------~gll---------------~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~lgv~t  298 (329)
                      ||+.+          +|+|               +||++|+.|++|+++|+.||.|  |+.|+++|++||+||++|+++.
T Consensus       650 nLL~~~~~W~~~~~~~gl~e~~d~~tg~~~~~~~~SD~~L~sd~~tr~~ve~YA~dd~q~~F~~DFa~Am~Km~~l~~f~  729 (737)
T 3vli_A          650 NLLDMGTEWEPAADSEHRYKGLDRDTGEVKWEATRIDLIFGSNDRLRAISEVYGSADAEKKLVHDFVDTWSKVMKLDRFD  729 (737)
T ss_dssp             HHHCTTEEEEECTTCSSCEEEEETTTCCEEEEECHHHHGGGTSHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred             HHHhCCcccccCCCCCCceeeeccCccceeeccchhhhhhccChhHHHHHHHHhccCcHHHHHHHHHHHHHHHhCCCCCc
Confidence            99997          7877               4999999999999999999999  9999999999999999999974


No 29 
>3n3r_A Catalase-peroxidase; E198A variant, tuberclosis, isonicotini hydrazide binding, oxidoreductase; HET: TOX HEM; 1.60A {Burkholderia pseudomallei} PDB: 3n3s_A* 3n3o_A* 2fxj_A* 3n3p_A* 2fxg_A* 3n3n_A* 2fxh_A* 2dv2_A* 3n3q_A* 2dv1_A* 1x7u_A* 1mwv_A* 2b2o_A* 2b2q_A* 2b2r_A* 2b2s_A*
Probab=100.00  E-value=4.2e-51  Score=423.52  Aligned_cols=221  Identities=17%  Similarity=0.232  Sum_probs=194.9

Q ss_pred             HHHHHHHhhCCCcHHHHHHHHhhcccCC------CCCCc-ceeccCCCCCCCCCCCCCCC--CC-chhHHHHHHHHHHhh
Q 040171           40 NVVQRRFNTDRSITGALLRMHFHDCFSG------NVCDA-SILIDSTIRSQPEKDSGSNL--TV-RGYEIIDEIKNAVEQ  109 (329)
Q Consensus        40 ~~v~~~~~~~~~~a~~llRL~FHDcfv~------~GcDg-Sill~~~~~~~~E~~~~~N~--~L-~g~~~Id~iK~~le~  109 (329)
                      +.+++.+....-.++.||||+||||.++      +|||| ||+|+      +|+++++|.  +| ++|++|+.||+++|+
T Consensus       464 ~~lk~~~~~~gl~~~~lvrlAwhdA~Tf~~sd~~GGanGa~Ir~~------pEk~~~~N~p~~L~~~~~vle~IK~~~e~  537 (748)
T 3n3r_A          464 AELKAKVLASGLTVSQLVSTAWAAASTFRGSDKRGGANGARIRLA------PQKDWEANQPEQLAAVLETLEAIRTAFNG  537 (748)
T ss_dssp             HHHHHHHHHTTCCHHHHHHHHHHHHTTCCTTTCCCSSTBCGGGST------TGGGCGGGCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCHHHHHHHHHHHhccccccCCCCCCCCceEEcc------ccccccCcchHHHHHHHHHHHHHHHHHHH
Confidence            4566777777778999999999999875      39998 88775      699999998  77 799999999999999


Q ss_pred             hCC--CCCCHHHHHHHhHHHHHHHhC-----CCCcccCCCCCCCCCCCCCCC---CC-CCCC---------C---CHHHH
Q 040171          110 KCP--STVSCADIIALATRDAVALAG-----GLNYSLPTGRLDGLRSNADEV---NL-PGTS---------L---SVPNV  166 (329)
Q Consensus       110 ~cp--~~VScADilalAar~av~~~G-----GP~~~v~~GR~D~~~s~~~~~---~L-P~p~---------~---~~~~l  166 (329)
                      .||  ++|||||||+||||+||+.+|     ||.|+|++||+|++++.....   +| |.|+         .   ++++|
T Consensus       538 ~c~~~~~VScADiIaLAg~~AVe~ag~~~G~Gp~vpf~~GR~Dat~~~td~~s~~~L~P~pdgfrny~~~~~~~~~~~~L  617 (748)
T 3n3r_A          538 AQRGGKQVSLADLIVLAGCAGVEQAAKNAGHAVTVPFAPGRADASQEQTDVESMAVLEPVADGFRNYLKGKYRVPAEVLL  617 (748)
T ss_dssp             TCSTTCCCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCSTTCCHHHHGGGCCSEEGGGTEESSCCSSCHHHHH
T ss_pred             hcCCCCcccHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCCCCCCccccccccCCCCCCccccccccccccCcHHHH
Confidence            997  589999999999999999998     999999999999999865321   46 8865         2   48999


Q ss_pred             HHHHHHcCCCcccceeeccc-ceeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHHH
Q 040171          167 LQMFAEKGFNTTETVVILGA-HTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYYN  245 (329)
Q Consensus       167 ~~~F~~~Gls~~dlVaLsGa-HTiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy~  245 (329)
                      ++.|+++|||.+|||||+|| ||||++||.++                          .+ +   + +.||.+|||+||+
T Consensus       618 id~F~~~GLs~~EmVaLsGa~HTlG~~h~~s~--------------------------~G-~---~-t~tP~~fDN~YF~  666 (748)
T 3n3r_A          618 VDKAQLLTLSAPEMTVLLGGLRVLGANVGQSR--------------------------HG-V---F-TAREQALTNDFFV  666 (748)
T ss_dssp             HHHHHHTTCCHHHHHHHHHHHHHHTCSGGGCC--------------------------TT-C---C-CSSTTSCCSHHHH
T ss_pred             HHHHHHcCCChHHHHhhcccceecccccccCC--------------------------CC-C---C-CCCCCccCHHHHH
Confidence            99999999999999999999 99999999653                          11 2   3 3799999999999


Q ss_pred             Hhhhc----------ccCc---------------cchhhhccCcchHHHHhhhccC--hhHHHHHHHHHHHHHhcCCCC
Q 040171          246 QTLFK----------RGVL---------------QIDQALALDASTHDIVAHFAND--EDDFQLSFANVMVKLGSLQVL  297 (329)
Q Consensus       246 ~l~~~----------~gll---------------~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~lgv~  297 (329)
                      ||+.+          +|+|               +||++|+.|++|+++|+.||.|  |+.|+++|++||+||++|+..
T Consensus       667 nLl~~~~~w~~~~~~~gl~eg~dr~tg~~~~~~l~SD~~L~sd~~tr~~ve~YA~dd~q~~F~~DFa~Am~Km~~ldrf  745 (748)
T 3n3r_A          667 NLLDMGTEWKPTAADADVFEGRDRATGELKWTGTRVDLVFGSHSQLRALAEVYGSADAQEKFVRDFVAVWNKVMNLDRF  745 (748)
T ss_dssp             HHTCTTEEEEECSSCTTEEEEEETTTCCEEEEEEHHHHGGGTSHHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHTTTCT
T ss_pred             HHHhCCccccccCCCCceeeeecCCccceeeecchhhhHhhcCchHHHHHHHHhccccHHHHHHHHHHHHHHHHccCCc
Confidence            99997          6776               5999999999999999999999  999999999999999999853


No 30 
>3ut2_A Catalase-peroxidase 2; KATG, fungal, heme enzyme, oxidoreducta; HET: TOX HEM; 1.55A {Magnaporthe oryzae 70-15}
Probab=100.00  E-value=3.9e-50  Score=416.49  Aligned_cols=220  Identities=15%  Similarity=0.229  Sum_probs=191.8

Q ss_pred             HHHHHHHhhC-CCcHHHHHHHHhhcccCC------CCCCc-ceeccCCCCCCCCCCCCCCC--CC-chhHHHHHHHHHHh
Q 040171           40 NVVQRRFNTD-RSITGALLRMHFHDCFSG------NVCDA-SILIDSTIRSQPEKDSGSNL--TV-RGYEIIDEIKNAVE  108 (329)
Q Consensus        40 ~~v~~~~~~~-~~~a~~llRL~FHDcfv~------~GcDg-Sill~~~~~~~~E~~~~~N~--~L-~g~~~Id~iK~~le  108 (329)
                      +.+++.+... .-.++.||||+||||.++      +|||| ||+|.      +|+++++|.  +| ++|++|+.||+++|
T Consensus       477 ~~lk~~~~~~~gl~~~~lvrlAwhdA~Tf~~sd~~GGanGasIrl~------pEk~~~~N~p~~L~~~~~vle~Ik~~~e  550 (764)
T 3ut2_A          477 DKLKAAILSTDGLDVSKLASTAMACATTYRNSDKRGGCNGARIALE------PQRNWVSNNPTQLSAVLDALKKVQSDFN  550 (764)
T ss_dssp             HHHHHHHHTSTTCCHHHHHHHHHHHHTTCBTTTTBCSSTBCGGGST------TGGGCGGGCHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCHHHHHHHHHhhccccccccccCCCCcceEEec------cccccccccchhHHHHHHHHHHHHHHHH
Confidence            3455555554 667999999999999765      39998 99886      699999999  77 79999999999999


Q ss_pred             hhCCC--CCCHHHHHHHhHHHHHHHhC-----CCCcccCCCCCCCCCCCCCC---CCC-CCCC------------CCHHH
Q 040171          109 QKCPS--TVSCADIIALATRDAVALAG-----GLNYSLPTGRLDGLRSNADE---VNL-PGTS------------LSVPN  165 (329)
Q Consensus       109 ~~cp~--~VScADilalAar~av~~~G-----GP~~~v~~GR~D~~~s~~~~---~~L-P~p~------------~~~~~  165 (329)
                      +. |+  +|||||||+||||+||+++|     ||.|+|++||+|++++....   .+| |.|+            ..+++
T Consensus       551 ~~-~g~~~VScADlIaLAg~~AV~~ag~~~G~gP~vpf~~GR~Dat~~~td~~s~~~LeP~~dgfrny~~~~~~~~~~~~  629 (764)
T 3ut2_A          551 GS-NGNKKVSLADLIVLGGTAAVEKAAKDAGVDIKVPFSAGRVDATQEQTDVTQFSYLEPQADGFRNYGRGTARARTEEI  629 (764)
T ss_dssp             TT-STTBCCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCCCBCCGGGSCHHHHHTTCCSEETTTTEECCBTTBCHHHH
T ss_pred             hc-CCCCcccHHHHHHHHHHHHHHHhhhccCCCCeeeecCCCCCCCccccccccccCCCCCCccccccccccccCChHHH
Confidence            99 76  89999999999999999999     99999999999999975432   156 8764            23588


Q ss_pred             HHHHHHHcCCCcccceeeccc-ceeccccccccCCcCCCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCCCCCcccChHHH
Q 040171          166 VLQMFAEKGFNTTETVVILGA-HTVGVVHCSFFQDRLADSDMDPAFAQELSKACEASSGSDDPMTNLDRGTPTSLDSQYY  244 (329)
Q Consensus       166 l~~~F~~~Gls~~dlVaLsGa-HTiG~~hc~~f~~Rl~dp~~d~~~~~~L~~~Cp~~~~~~~~~~~lD~~tp~~FDN~Yy  244 (329)
                      |++.|+++|||.+|||||+|| ||||+.||.+|.                          + +   + +.||.+|||+||
T Consensus       630 Li~~F~~~GLs~~EmVaLsGa~HTlG~~hc~s~~--------------------------G-~---~-t~tP~~fDN~YF  678 (764)
T 3ut2_A          630 MVDKASQLTLTPPELTVLVGGMRALGANYDGSDV--------------------------G-V---F-TANKGKLTPDFF  678 (764)
T ss_dssp             HHHHHHHTTCCHHHHHHHHHHHHHTTCCTTCCCT--------------------------T-C---C-CSSTTSCCSHHH
T ss_pred             HHHHHHHcCCCHHHHHHhhcCceeccccccCCCC--------------------------C-C---C-CCCCCcCCHHHH
Confidence            999999999999999999999 999999998751                          1 1   2 479999999999


Q ss_pred             HHhhh----------cccCc---------------cchhhhccCcchHHHHhhhccC--hhHHHHHHHHHHHHHhcCCCC
Q 040171          245 NQTLF----------KRGVL---------------QIDQALALDASTHDIVAHFAND--EDDFQLSFANVMVKLGSLQVL  297 (329)
Q Consensus       245 ~~l~~----------~~gll---------------~SD~~L~~d~~t~~~V~~yA~d--~~~F~~~Fa~Am~Km~~lgv~  297 (329)
                      +||+.          ++|+|               +||++|+.|++|+.+|+.||+|  |+.|+++|++||+||++|+..
T Consensus       679 ~nLl~~~~~w~~~~~~~gl~eg~dr~tG~~~~~~l~SD~~L~sds~tra~ve~YA~dd~q~~F~~DFa~Am~Km~~ldrf  758 (764)
T 3ut2_A          679 VNLVDMNIAWTASGADGESWVGTDRKSRSEKYKGSRADLVFGSHAELRAIAEVYAENGNQEKFVKDFVAAWTKVMNLDRF  758 (764)
T ss_dssp             HHHTCTTEEEEECSSSSCEEEEEETTTCCEEEEEEHHHHGGGTSHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHTTTCT
T ss_pred             HHHHhcccccccCCCCCcceEeecCCCCceeeecChhHhhhhcCHHHHHHHHHHhCcCcHHHHHHHHHHHHHHHHccCCc
Confidence            99998          56765               7999999999999999999999  999999999999999999864


No 31 
>2yma_A YOS9P, protein OS-9 homolog; carbohydrate binding protein, quality control, endoplasmic reticulum-associated protein degradation; 2.54A {Saccharomyces cerevisiae}
Probab=57.30  E-value=7.1  Score=33.21  Aligned_cols=31  Identities=26%  Similarity=0.360  Sum_probs=26.5

Q ss_pred             ChhHHHHHHHHHHHHHhcCCCCCCCCccccc
Q 040171          276 DEDDFQLSFANVMVKLGSLQVLTDGQGEIRQ  306 (329)
Q Consensus       276 d~~~F~~~Fa~Am~Km~~lgv~tg~~GeiR~  306 (329)
                      ..+.|+++|..||.||..++.+..++|-.-.
T Consensus        50 ~~~~~yk~~g~A~~kml~~~ll~~P~g~p~~   80 (161)
T 2yma_A           50 ITETYYQKFGNAINKMLSLRLVSLPNGHILQ   80 (161)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTCCBCTTSCBCC
T ss_pred             HHHHHHHHHHHHHHHHHHhCcccCCCCCCCC
Confidence            3488999999999999999999998875433


No 32 
>2llv_A Heat shock protein STI1; DP domain, alpha helix, chaperone; NMR {Saccharomyces cerevisiae}
Probab=21.63  E-value=76  Score=22.91  Aligned_cols=37  Identities=8%  Similarity=0.164  Sum_probs=27.2

Q ss_pred             hhccCcchHHHHhhhccChhHHHH------HHHHHHHHHhcCC
Q 040171          259 ALALDASTHDIVAHFANDEDDFQL------SFANVMVKLGSLQ  295 (329)
Q Consensus       259 ~L~~d~~t~~~V~~yA~d~~~F~~------~Fa~Am~Km~~lg  295 (329)
                      +++.||+....++...+|+..+.+      ++...+.||..++
T Consensus        27 ~~~~DP~~~~~lq~i~~NP~~i~~~~~~dPrv~~~l~~L~g~~   69 (71)
T 2llv_A           27 EMMKDPQLVAKLIGYKQNPQAIGQDLFTDPRLMTIMATLMGVD   69 (71)
T ss_dssp             HHHHSCTHHHHHHHHHHSCTTHHHHTTTCHHHHHHHHHHHTTT
T ss_pred             HHhcCHHHHHHHHHHHHCHHHHHHHHhhCcHHHHHHHHHHcCC
Confidence            456778888888888888877776      6777777776544


Done!