BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040174
(332 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 14/155 (9%)
Query: 188 RRFFYRDLASATSNFPENKM-----------GYLIDLDMAAAVKNVSRGSKQGKKEYVTE 236
+RF R+L A+ NF + G L D + A + ++ G+ ++ TE
Sbjct: 18 KRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTE 77
Query: 237 VKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGK---KRPLAWAVRYMIS 293
V+ IS HRNL++L G C E LLVY +M NGS+ + L + + PL W R I+
Sbjct: 78 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 137
Query: 294 LGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVE 328
LG A L YL++ + ++HRD K++NI+LD + E
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 172
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 82/155 (52%), Gaps = 14/155 (9%)
Query: 188 RRFFYRDLASATSNFPENKM-----------GYLIDLDMAAAVKNVSRGSKQGKKEYVTE 236
+RF R+L A+ NF + G L D + A + + G+ ++ TE
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 237 VKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGK---KRPLAWAVRYMIS 293
V+ IS HRNL++L G C E LLVY +M NGS+ + L + + PL W R I+
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIA 145
Query: 294 LGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVE 328
LG A L YL++ + ++HRD K++NI+LD + E
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 28/158 (17%)
Query: 190 FFYRDLASATSNFPE-------NKMG----------YLIDLDMA----AAVKNVSRGSKQ 228
F + +L + T+NF E NKMG Y+ + +A AA+ +++ +++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT--TEE 72
Query: 229 GKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL--FGKKRPLAW 286
K+++ E+K +++ +H NLV+LLG D + LVY +MPNGSL RL PL+W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 287 AVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+R I+ G A + +L+E +HRD KS+NI+LD
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLD 167
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 28/158 (17%)
Query: 190 FFYRDLASATSNFPE-------NKMG----------YLIDLDMA----AAVKNVSRGSKQ 228
F + +L + T+NF E NKMG Y+ + +A AA+ +++ +++
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT--TEE 72
Query: 229 GKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL--FGKKRPLAW 286
K+++ E+K +++ +H NLV+LLG D + LVY +MPNGSL RL PL+W
Sbjct: 73 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 132
Query: 287 AVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+R I+ G A + +L+E +HRD KS+NI+LD
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLD 167
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 88/158 (55%), Gaps = 28/158 (17%)
Query: 190 FFYRDLASATSNFPE-------NKMG----------YLIDLDMA----AAVKNVSRGSKQ 228
F + +L + T+NF E NKMG Y+ + +A AA+ +++ +++
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT--TEE 66
Query: 229 GKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL--FGKKRPLAW 286
K+++ E+K +++ +H NLV+LLG D + LVY +MPNGSL RL PL+W
Sbjct: 67 LKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW 126
Query: 287 AVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+R I+ G A + +L+E +HRD KS+NI+LD
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLD 161
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 88/167 (52%), Gaps = 22/167 (13%)
Query: 176 SINDDLERGAVPRRFFYR----DLASATSNFPENKM-----------GYLIDLDMAAAVK 220
SIND L + YR DL AT+NF + G L D A+K
Sbjct: 11 SINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD-GAKVALK 69
Query: 221 NVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGK 280
+ S QG +E+ TE++T+S RH +LV L+G C +R E +L+Y++M NG+L L+G
Sbjct: 70 RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 281 KRP---LAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
P ++W R I +G A L YL+ + ++HRD KS NI+LD
Sbjct: 130 DLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLD 173
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 88/167 (52%), Gaps = 22/167 (13%)
Query: 176 SINDDLERGAVPRRFFYR----DLASATSNFPENKM-----------GYLIDLDMAAAVK 220
SIND L + YR DL AT+NF + G L D A+K
Sbjct: 11 SINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRD-GAKVALK 69
Query: 221 NVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGK 280
+ S QG +E+ TE++T+S RH +LV L+G C +R E +L+Y++M NG+L L+G
Sbjct: 70 RRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGS 129
Query: 281 KRP---LAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
P ++W R I +G A L YL+ + ++HRD KS NI+LD
Sbjct: 130 DLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLD 173
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 83/158 (52%), Gaps = 28/158 (17%)
Query: 190 FFYRDLASATSNFPENKM-----------------GYLIDLDMA----AAVKNVSRGSKQ 228
F + +L + T+NF E + GY+ + +A AA+ +++ +++
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDIT--TEE 63
Query: 229 GKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL--FGKKRPLAW 286
K+++ E+K ++ +H NLV+LLG D + LVY + PNGSL RL PL+W
Sbjct: 64 LKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW 123
Query: 287 AVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
R I+ G A + +L+E +HRD KS+NI+LD
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLD 158
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 208 GYLIDLDMAAAVKNVSRGSKQGK-------KEYVTEVKTISQLRHRNLVQLLGCCHDRGE 260
G L+ A+K++ G +G+ +E+ EV +S L H N+V+L G H+
Sbjct: 38 GRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR 97
Query: 261 FLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSN 320
+V EF+P G L RL K P+ W+V+ + L +A + Y+ + +VHRD +S N
Sbjct: 98 --MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPN 154
Query: 321 IML 323
I L
Sbjct: 155 IFL 157
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 208 GYLIDLDMAAAVKNVSRGSKQGK-------KEYVTEVKTISQLRHRNLVQLLGCCHDRGE 260
G L+ A+K++ G +G+ +E+ EV +S L H N+V+L G H+
Sbjct: 38 GRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR 97
Query: 261 FLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSN 320
+V EF+P G L RL K P+ W+V+ + L +A + Y+ + +VHRD +S N
Sbjct: 98 --MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPN 154
Query: 321 IML 323
I L
Sbjct: 155 IFL 157
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 10/123 (8%)
Query: 208 GYLIDLDMAAAVKNVSRGSKQGK-------KEYVTEVKTISQLRHRNLVQLLGCCHDRGE 260
G L+ A+K++ G +G+ +E+ EV +S L H N+V+L G H+
Sbjct: 38 GRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR 97
Query: 261 FLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSN 320
+V EF+P G L RL K P+ W+V+ + L +A + Y+ + +VHRD +S N
Sbjct: 98 --MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPN 154
Query: 321 IML 323
I L
Sbjct: 155 IFL 157
>pdb|1QNW|A Chain A, Lectin Ii From Ulex Europaeus
pdb|1QNW|B Chain B, Lectin Ii From Ulex Europaeus
pdb|1QNW|C Chain C, Lectin Ii From Ulex Europaeus
pdb|1QNW|D Chain D, Lectin Ii From Ulex Europaeus
pdb|1QOO|A Chain A, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|B Chain B, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|C Chain C, Lectin Uea-Ii Complexed With Nag
pdb|1QOO|D Chain D, Lectin Uea-Ii Complexed With Nag
pdb|1QOT|A Chain A, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|B Chain B, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|C Chain C, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOT|D Chain D, Lectin Uea-Ii Complexed With Fucosyllactose And
Fucosylgalactose
pdb|1QOS|A Chain A, Lectin Uea-Ii Complexed With Chitobiose
pdb|1QOS|B Chain B, Lectin Uea-Ii Complexed With Chitobiose
pdb|1DZQ|A Chain A, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|B Chain B, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|C Chain C, Lectin Uea-Ii Complexed With Galactose
pdb|1DZQ|D Chain D, Lectin Uea-Ii Complexed With Galactose
Length = 242
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 66/217 (30%)
Query: 1 KKILYQGDA-ISSVGAIELTKNNEYLT-----------------------DFSTKFSFQI 36
K I++QGDA +S+ G +++TK ++ T F+T FSF +
Sbjct: 18 KNIIFQGDASVSTTGVLQVTKVSKPTTTSIGRALYAAPIQIWDSITGKVASFATSFSFVV 77
Query: 37 DTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSSTNHIASE---------- 86
+ GL FFLA QIP S+ G+ GL +++ S SS IA E
Sbjct: 78 KA-DKSDGVDGLAFFLAPANSQIPSGSSAGMFGLFSSSDSKSSNQIIAVEFDTYFGKAYN 136
Query: 87 ------------------------DFHRQDTADVQIAYNSTTKNLSVSWTYRLISDPREN 122
D+ + ADV I Y + TK+L+V +Y P +
Sbjct: 137 PWDPDFKHIGIDVNSIKSIKTVKWDWRNGEVADVVITYRAPTKSLTVCLSY-----PSDG 191
Query: 123 TS--LFYIIDLMKVLSQWVTIGFSAATGHCSDNGTVD 157
TS + +DL +L +WV++GFS G+ ++ T D
Sbjct: 192 TSNIITASVDLKAILPEWVSVGFSGGVGNAAEFETHD 228
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 207 MGYLIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYE 266
+GY ++ D A+K + GS + +++ E + + +L H LVQL G C ++ LV+E
Sbjct: 45 LGYWLNKD-KVAIKTIKEGS-MSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 102
Query: 267 FMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
FM +G L L ++ A + L + + YL E CV+HRD + N ++
Sbjct: 103 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLV 156
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 207 MGYLIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYE 266
+GY ++ D A+K + G+ +++++ E + + +L H LVQL G C ++ LV+E
Sbjct: 23 LGYWLNKD-KVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 80
Query: 267 FMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
FM +G L L ++ A + L + + YL E CV+HRD + N ++
Sbjct: 81 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLV 134
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 207 MGYLIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYE 266
+GY ++ D A+K + G+ +++++ E + + +L H LVQL G C ++ LV+E
Sbjct: 25 LGYWLNKD-KVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 82
Query: 267 FMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
FM +G L L ++ A + L + + YL E CV+HRD + N ++
Sbjct: 83 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLV 136
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 207 MGYLIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYE 266
+GY ++ D A+K + G+ +++++ E + + +L H LVQL G C ++ LV+E
Sbjct: 28 LGYWLNKD-KVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 85
Query: 267 FMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
FM +G L L ++ A + L + + YL E CV+HRD + N ++
Sbjct: 86 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLV 139
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 21/121 (17%)
Query: 212 DLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNG 271
D D++ ++NV + E K + L+H N++ L G C LV EF G
Sbjct: 43 DEDISQTIENVRQ-----------EAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGG 91
Query: 272 SLDARLFGKKRP----LAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDV 327
L+ L GK+ P + WAV+ +A + YL++E ++HRD KSSNI++ V
Sbjct: 92 PLNRVLSGKRIPPDILVNWAVQ------IARGMNYLHDEAIVPIIHRDLKSSNILILQKV 145
Query: 328 E 328
E
Sbjct: 146 E 146
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 207 MGYLIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYE 266
+GY ++ D A+K + G+ +++++ E + + +L H LVQL G C ++ LV E
Sbjct: 26 LGYWLNKD-KVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTE 83
Query: 267 FMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
FM +G L L ++ A + L + + YL E CV+HRD + N ++
Sbjct: 84 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLV 137
>pdb|1FX5|A Chain A, Crystal Structure Analysis Of Ulex Europaeus Lectin I
pdb|1FX5|B Chain B, Crystal Structure Analysis Of Ulex Europaeus Lectin I
pdb|1JXN|A Chain A, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|B Chain B, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|C Chain C, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
pdb|1JXN|D Chain D, Crystal Structure Of The Lectin I From Ulex Europaeus In
Complex With The Methyl Glycoside Of Alpha-l-fucose
Length = 242
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 70/165 (42%), Gaps = 45/165 (27%)
Query: 21 NNEYLTDFSTKFSFQIDTLGRPTYG-HGLVFFLATVGLQIPLNSAGGILGLLNTTASFSS 79
N L F T FSF ++T P GL FFLA PL AGG GL N T SS
Sbjct: 61 NTGELASFITSFSFFMETSANPKAATDGLTFFLAPP--DSPLRRAGGYFGLFNDTKCDSS 118
Query: 80 TNHIASE-----------------------------------DFHRQDTADVQIAYNSTT 104
+A E + + A+V+I Y +++
Sbjct: 119 YQTVAVEFDTIGSPVNFWDPGFPHIGIDVNCVKSINAERWNKRYGLNNVANVEIIYEASS 178
Query: 105 KNLSVSWTYRLISDPRENTSLFY--IIDLMKVLSQWVTIGFSAAT 147
K L+ S TY P + TS+ I+DL ++L +WV++GFS +T
Sbjct: 179 KTLTASLTY-----PSDQTSISVTSIVDLKEILPEWVSVGFSGST 218
>pdb|3ZVX|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZVX|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With A Trimannoside
pdb|3ZYR|A Chain A, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
pdb|3ZYR|B Chain B, Structure Of The Lectin From Platypodium Elegans In
Complex With Heptasaccharide
Length = 261
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 43/167 (25%)
Query: 20 KNNEYLTDFSTKFSFQIDT-LGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNT-TASF 77
K+ + + T+FSF + + L P G+ FF+A IP SAGG+LGL N TA
Sbjct: 70 KSTNRVANLQTQFSFFLSSPLSNP--ADGIAFFIAPPDTTIPSGSAGGLLGLFNPRTALN 127
Query: 78 SSTNHIASEDF---------------------------------HRQD--TADVQIAYNS 102
S N + + +F R++ T +V + YN
Sbjct: 128 ESANQVLAVEFDTFFAQNSNTWDPNYQHIGIDVNSIRSSKVVRWERREGKTLNVLVTYNP 187
Query: 103 TTKNLSVSWTYRLISDPRENTSLFYIIDLMKVLSQWVTIGFSAATGH 149
+T+ + V TY + L +++DL +L +WV +GFSAA+G
Sbjct: 188 STRTIDVVATY----PDGQRYQLSHVVDLTTILPEWVRVGFSAASGE 230
>pdb|3IPV|A Chain A, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|C Chain C, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 251
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 62/158 (39%), Gaps = 41/158 (25%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSSTNHIA 84
+ F+T F F I T GL FFLA V P +S GG LGL ++ S S+ +A
Sbjct: 67 VASFATSFRFTIYAPNIATIADGLAFFLAPVA-SAP-DSGGGFLGLFDSAVSGSTYQTVA 124
Query: 85 SE--------------------------------DFHRQDTADVQIAYNSTTKNLSVSWT 112
E + A V I YNS K L S
Sbjct: 125 VEFDTYENTVFTDPPYTHIGFDVNSISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLV 184
Query: 113 YRLISDPRENTSLFY--IIDLMKVLSQWVTIGFSAATG 148
Y P TS I+DL VL +WV +GFSAATG
Sbjct: 185 Y-----PSSKTSFILADIVDLSSVLPEWVRVGFSAATG 217
>pdb|3USU|A Chain A, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|C Chain C, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|E Chain E, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|G Chain G, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 256
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 78/207 (37%), Gaps = 68/207 (32%)
Query: 6 QGDA-ISSVGAIELTKNNE--------------------------YLTDFSTKFSFQIDT 38
QGDA ++S G ++LTK ++ + F+T F F I
Sbjct: 22 QGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASPINIWDSKTGVVASFATSFRFTIYA 81
Query: 39 LGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSSTNHIASE------------ 86
T GL FFLA V P + G LGL ++ SS +A E
Sbjct: 82 PNIATIADGLAFFLAPV--SSPPKAGAGFLGLFDSAVFNSSYQTVAVEFDTYENTVFLDP 139
Query: 87 --------------------DFHRQDTADVQIAYNSTTKNLSVSWTYRLISDPRENTSLF 126
D + A V I Y+S+ K L + Y P TS
Sbjct: 140 PDTHIGIDVNSIKSIKTVKWDLANGEAAKVLITYDSSAKLLVAALVY-----PSSKTSFI 194
Query: 127 Y--IIDLMKVLSQWVTIGFSAATGHCS 151
++DL VL +WV+IGFSAATG S
Sbjct: 195 LSDVVDLKSVLPEWVSIGFSAATGASS 221
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 5/117 (4%)
Query: 207 MGYLIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYE 266
+GY ++ D A+K + G+ +++++ E + + +L H LVQL G C ++ LV+E
Sbjct: 25 LGYWLNKD-KVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFE 82
Query: 267 FMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
FM +G L L ++ A + L + + YL E V+HRD + N ++
Sbjct: 83 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCLV 136
>pdb|3USU|B Chain B, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|D Chain D, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|F Chain F, Crystal Structure Of Butea Monosperma Seed Lectin
pdb|3USU|H Chain H, Crystal Structure Of Butea Monosperma Seed Lectin
Length = 242
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 78/207 (37%), Gaps = 68/207 (32%)
Query: 6 QGDA-ISSVGAIELTKNNE--------------------------YLTDFSTKFSFQIDT 38
QGDA ++S G ++LTK ++ + F+T F F I
Sbjct: 22 QGDATVTSSGTLQLTKVDKNGVPDPKSLGRALYASPINIWDSKTGVVASFATSFRFTIYA 81
Query: 39 LGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSSTNHIASE------------ 86
T GL FFLA V P + G LGL ++ SS +A E
Sbjct: 82 PNIATIADGLAFFLAPV--SSPPKAGAGFLGLFDSAVFNSSYQTVAVEFDTYENTVFLDP 139
Query: 87 --------------------DFHRQDTADVQIAYNSTTKNLSVSWTYRLISDPRENTSLF 126
D + A V I Y+S+ K L + Y P TS
Sbjct: 140 PDTHIGIDVNSIKSIKTVKWDLANGEAAKVLITYDSSAKLLVAALVY-----PSSKTSFI 194
Query: 127 Y--IIDLMKVLSQWVTIGFSAATGHCS 151
++DL VL +WV+IGFSAATG S
Sbjct: 195 LSDVVDLKSVLPEWVSIGFSAATGASS 221
>pdb|2FMD|A Chain A, Structural Basis Of Carbohydrate Recognition By Bowringia
Milbraedii Seed Agglutinin
Length = 240
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 70/170 (41%), Gaps = 44/170 (25%)
Query: 16 IELTKNNEYLTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTA 75
I L +++ + F T F+F I + G T L FF+A+ +IP S G +LGL ++
Sbjct: 57 IRLWQSSSLVASFETTFTFSI-SQGSSTPADALTFFIASPDTKIPSGSGGRLLGLFGSSN 115
Query: 76 SFSSTNHIASEDF---------------------------------HRQDTADVQIAYNS 102
+ S N + S +F TA I+YNS
Sbjct: 116 NAGSDNGVVSVEFDTYPNTDIGDPNYRHIGIDVNSIRSKAASKWDWQNGKTATAHISYNS 175
Query: 103 TTKNLSVSWTYRLISDPRENTSLFYI---IDLMKVLSQWVTIGFSAATGH 149
+K LSV +Y N+S + ++L V WV +GFSA TG
Sbjct: 176 ASKRLSVVSSY-------PNSSPVVVSFDVELNNVXPXWVRVGFSATTGQ 218
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
AA K + S++ ++Y+ E+ ++ H N+V+LL + ++ EF G++DA
Sbjct: 65 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +RPL + ++ AL YL+ + ++HRD K+ NI+ +D +I
Sbjct: 125 MLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDI 174
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
AA K + S++ ++Y+ E+ ++ H N+V+LL + ++ EF G++DA
Sbjct: 65 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +RPL + ++ AL YL+ + ++HRD K+ NI+ +D +I
Sbjct: 125 MLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDI 174
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
AA K + S++ ++Y+ E+ ++ H N+V+LL + ++ EF G++DA
Sbjct: 65 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 124
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +RPL + ++ AL YL+ + ++HRD K+ NI+ +D +I
Sbjct: 125 MLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDI 174
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
AA K + S++ ++Y+ E++ ++ H +V+LLG + G+ ++ EF P G++DA
Sbjct: 39 AAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI 98
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ R L ++ + AL +L+ + ++HRD K+ N+++ ++ +I
Sbjct: 99 MLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDI 148
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 60/113 (53%), Gaps = 3/113 (2%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
AA K + S++ ++Y+ E+ ++ H N+V+LL + ++ EF G++DA
Sbjct: 38 AAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAV 97
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +RPL + ++ AL YL+ + ++HRD K+ NI+ +D +I
Sbjct: 98 MLELERPLTESQIQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDI 147
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
AA K + S++ ++Y+ E++ ++ H +V+LLG + G+ ++ EF P G++DA
Sbjct: 47 AAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAI 106
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ R L ++ + AL +L+ + ++HRD K+ N+++ ++ +I
Sbjct: 107 MLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDI 156
>pdb|3IPV|B Chain B, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
pdb|3IPV|D Chain D, Crystal Structure Of Spatholobus Parviflorus Seed Lectin
Length = 239
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 61/158 (38%), Gaps = 41/158 (25%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSSTNHIA 84
+ F+T F F I T GL FFLA V P +S GG LGL ++ ++ +A
Sbjct: 67 VASFATSFRFTIYAPNIATIADGLAFFLAPVA-SAP-DSGGGFLGLFDSAVGDTTYQTVA 124
Query: 85 SE--------------------------------DFHRQDTADVQIAYNSTTKNLSVSWT 112
E + A V I YNS K L S
Sbjct: 125 VEFDTYENTVFTDPPYTHIGFDVNSISSIKTVKWSLANGEAAKVLITYNSAVKLLVASLV 184
Query: 113 YRLISDPRENTSLFY--IIDLMKVLSQWVTIGFSAATG 148
Y P TS I+DL VL +WV +GFSAATG
Sbjct: 185 Y-----PSSKTSFILADIVDLSSVLPEWVRVGFSAATG 217
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
D+A A+K + G +++ +++++ E + Q H N+V L G ++V EFM NG+
Sbjct: 71 DVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGA 130
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LDA F +K + V ++ + G+A + YL + VHRD + NI+++
Sbjct: 131 LDA--FLRKHDGQFTVIQLVGMLRGIAAGMRYLA---DMGYVHRDLAARNILVN 179
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
+++ A+K + G +++ +++++ E + Q H N+++L G ++V E+M NGS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD+ F +K + V ++ + G+A+ + YL + VHRD + NI+++
Sbjct: 133 LDS--FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGFVHRDLAARNILIN 181
>pdb|1FNY|A Chain A, Legume Lectin Of The Bark Of Robinia Pseudoacacia.
pdb|1FNZ|A Chain A, A Bark Lectin From Robinia Pseudoacacia In Complex With N-
Acetylgalactosamine
Length = 237
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 67/158 (42%), Gaps = 42/158 (26%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSSTNHIA 84
+ F T F+F I T GL FFLA V Q PL+ GG+LG+ F+ +N I
Sbjct: 66 VASFVTSFTFIIQAPNPATTADGLAFFLAPVDTQ-PLD-LGGMLGIFK-DGYFNKSNQIV 122
Query: 85 SEDFH--------------------------------RQDTADVQIAYNSTTKNLSVSWT 112
+ +F + A+V I+Y ++TK+L+ S
Sbjct: 123 AVEFDTFSNGDWDPKGRHLGINVNSIESIKTVPWNWTNGEVANVFISYEASTKSLTASLV 182
Query: 113 YRLISDPRENTSLFY--IIDLMKVLSQWVTIGFSAATG 148
Y P TS I+D+ VL +WV GFSA TG
Sbjct: 183 Y-----PSLETSFIIDAIVDVKIVLPEWVRFGFSATTG 215
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
+++ A+K + G +++ +++++ E + Q H N+++L G ++V E+M NGS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD+ F +K + V ++ + G+A+ + YL + VHRD + NI+++
Sbjct: 133 LDS--FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 181
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
+++ A+K + G +++ +++++ E + Q H N+++L G ++V E+M NGS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD+ F +K + V ++ + G+A+ + YL + VHRD + NI+++
Sbjct: 133 LDS--FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 181
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
+++ A+K + G +++ +++++ E + Q H N+++L G ++V E+M NGS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD+ F +K + V ++ + G+A+ + YL + VHRD + NI+++
Sbjct: 133 LDS--FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 181
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
+++ A+K + G +++ +++++ E + Q H N+++L G ++V E+M NGS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD+ F +K + V ++ + G+A+ + YL + VHRD + NI+++
Sbjct: 133 LDS--FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 181
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
+++ A+K + G +++ +++++ E + Q H N+++L G ++V E+M NGS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD+ F +K + V ++ + G+A+ + YL + VHRD + NI+++
Sbjct: 133 LDS--FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 181
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
+++ A+K + G +++ +++++ E + Q H N+++L G ++V E+M NGS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 132
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD+ F +K + V ++ + G+A+ + YL + VHRD + NI+++
Sbjct: 133 LDS--FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 181
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
+++ A+K + G +++ +++++ E + Q H N+++L G ++V E+M NGS
Sbjct: 61 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 120
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD+ F +K + V ++ + G+A+ + YL + VHRD + NI+++
Sbjct: 121 LDS--FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 169
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
+++ A+K + G +++ +++++ E + Q H N+++L G ++V E+M NGS
Sbjct: 44 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 103
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD+ F +K + V ++ + G+A+ + YL + VHRD + NI+++
Sbjct: 104 LDS--FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 152
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 64/114 (56%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
+++ A+K + G +++ +++++ E + Q H N+++L G ++V E+M NGS
Sbjct: 71 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGS 130
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD+ F +K + V ++ + G+A+ + YL + VHRD + NI+++
Sbjct: 131 LDS--FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 179
>pdb|1FAT|A Chain A, Phytohemagglutinin-L
pdb|1FAT|B Chain B, Phytohemagglutinin-L
pdb|1FAT|C Chain C, Phytohemagglutinin-L
pdb|1FAT|D Chain D, Phytohemagglutinin-L
Length = 252
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 61/152 (40%), Gaps = 38/152 (25%)
Query: 28 FSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSST------- 80
F+T F+F I GL F L VG Q GG LGL + + S T
Sbjct: 68 FATSFTFNIQVPNNAGPADGLAFALVPVGSQP--KDKGGFLGLFDGSNSNFHTVAVEFDT 125
Query: 81 ----------NHIASE------------DFHRQDTADVQIAYNSTTKNLSVSWTYRLISD 118
HI + DF + A+V I Y+S+T L S Y
Sbjct: 126 LYNKDWDPTERHIGIDVNSIRSIKTTRWDFVNGENAEVLITYDSSTNLLVASLVY----- 180
Query: 119 PRENTSLFY--IIDLMKVLSQWVTIGFSAATG 148
P + TS +DL VL +WV++GFSA TG
Sbjct: 181 PSQKTSFIVSDTVDLKSVLPEWVSVGFSATTG 212
>pdb|1AVB|A Chain A, Arcelin-1 From Phaseolus Vulgaris L
pdb|1AVB|B Chain B, Arcelin-1 From Phaseolus Vulgaris L
Length = 226
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 79/195 (40%), Gaps = 54/195 (27%)
Query: 3 ILYQGDA-ISSVGAIELT--KNNEY---------------------LTDFSTKFSFQIDT 38
++ QGDA +SS G + LT K NE L FST F+F+I+
Sbjct: 16 LILQGDATVSSEGHLLLTNVKGNEEDSMGRAFYSAPIQINDRTIDNLASFSTNFTFRINA 75
Query: 39 LGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTA---------------------SF 77
+GL F L VG + L G LGL NTT
Sbjct: 76 KNIENSAYGLAFALVPVGSRPKL--KGRYLGLFNTTNYDRDAHTVAVVFDTVSNRIEIDV 133
Query: 78 SSTNHIASED----FHRQDTADVQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDLMK 133
+S IA+E + + A+V+I Y+S +L VS Y E + + L K
Sbjct: 134 NSIRPIATESCNFGHNNGEKAEVRITYDSPKNDLRVSLLY---PSSEEKCHVSATVPLEK 190
Query: 134 VLSQWVTIGFSAATG 148
+ WV++GFSA +G
Sbjct: 191 EVEDWVSVGFSATSG 205
>pdb|1G8W|A Chain A, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|B Chain B, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|C Chain C, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
pdb|1G8W|D Chain D, Improved Structure Of Phytohemagglutinin-L From The Kidney
Bean
Length = 233
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 62/155 (40%), Gaps = 38/155 (24%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSST---- 80
+ F+T F+F I GL F L VG Q GG LGL + + S T
Sbjct: 65 VASFATSFTFNIQVPNNAGPADGLAFALVPVGSQ--PKDKGGFLGLFDGSNSNFHTVAVE 122
Query: 81 -------------NHIASE------------DFHRQDTADVQIAYNSTTKNLSVSWTYRL 115
HI + DF + A+V I Y+S+T L S Y
Sbjct: 123 FDTLYNKDWDPTERHIGIDVNSIRSIKTTRWDFVNGENAEVLITYDSSTNLLVASLVY-- 180
Query: 116 ISDPRENTSLFY--IIDLMKVLSQWVTIGFSAATG 148
P + TS +DL VL +WV++GFSA TG
Sbjct: 181 ---PSQKTSFIVSDTVDLKSVLPEWVSVGFSATTG 212
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
+++ A+K + G +++ +++++ E + Q H N+++L G ++V E M NGS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGS 132
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD+ F +K + V ++ + G+A+ + YL + VHRD + NI+++
Sbjct: 133 LDS--FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGAVHRDLAARNILIN 181
>pdb|3UJO|A Chain A, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|B Chain B, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|C Chain C, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJO|D Chain D, Galactose-Specific Seed Lectin From Dolichos Lablab In
Complex With Adenine And Galactose
pdb|3UJQ|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UJQ|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In Complex
With Galactose
pdb|3UK9|A Chain A, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|B Chain B, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|C Chain C, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|D Chain D, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|E Chain E, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|F Chain F, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|G Chain G, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UK9|H Chain H, Galactose-Specific Lectin From Dolichos Lablab
pdb|3UL2|A Chain A, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|B Chain B, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|C Chain C, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
pdb|3UL2|D Chain D, Galactose-Specific Lectin From Dolichos Lablab In P6522
Space Group
Length = 281
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSSTNHIA 84
+ ++T F+F + + GL F L VG Q P + GG LGL ++ SS +A
Sbjct: 87 VASWATSFTFNLQAPNAASPADGLAFALVPVGSQ-PKDK-GGFLGLFDSKNYASSNQTVA 144
Query: 85 SE-------------------------------DFHRQDTADVQIAYNSTTKNLSVSWTY 113
E DF + A+V I Y+S+T L S +
Sbjct: 145 VEFDTFYNGGWDPTERHIGIDVNSIKSIKTTSWDFANGENAEVLITYDSSTNLLVASLVH 204
Query: 114 RLISDPRENTSLFYI--IDLMKVLSQWVTIGFSAATG 148
P + TS +DL VL +WV++GFSA TG
Sbjct: 205 -----PSQKTSFIVSERVDLTSVLPEWVSVGFSATTG 236
>pdb|2BQP|A Chain A, The Structure Of The Pea Lectin-D-Glucopyranose Complex
pdb|2BQP|B Chain B, The Structure Of The Pea Lectin-D-Glucopyranose Complex
Length = 234
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 37/159 (23%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSSTNHIA 84
+ +F T F+F I+ G FF+A V + + GG LG+ N+ +T +A
Sbjct: 60 VANFVTSFTFVINAPNSYNVADGFTFFIAPVDTK--PQTGGGYLGVFNSAEYDKTTQTVA 117
Query: 85 SE--------------DFH-------------------RQDTADVQIAYNSTTKNLSVSW 111
E D H + A+V IA+N+ T L+VS
Sbjct: 118 VEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSWKLQNGEEANVVIAFNAATNVLTVSL 177
Query: 112 TYRLISDPRENTS--LFYIIDLMKVLSQWVTIGFSAATG 148
TY S E TS L ++ L V+ +WV IGFSA TG
Sbjct: 178 TYPNNSLEEEVTSYTLSDVVSLKDVVPEWVRIGFSATTG 216
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
Query: 218 AVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
A+K + G +++ ++E+++E + Q H N+++L G + +++ EFM NG+LD+
Sbjct: 48 AIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS- 106
Query: 277 LFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLDVDV 327
F + + V ++ + G+A+ + YL E VHRD + NI+++ ++
Sbjct: 107 -FLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSYVHRDLAARNILVNSNL 155
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
Query: 218 AVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
A+K + G +++ ++E+++E + Q H N+++L G + +++ EFM NG+LD+
Sbjct: 46 AIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDS- 104
Query: 277 LFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLDVDV 327
F + + V ++ + G+A+ + YL E VHRD + NI+++ ++
Sbjct: 105 -FLRLNDGQFTVIQLVGMLRGIASGMRYLA---EMSYVHRDLAARNILVNSNL 153
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
+++ A+K + G +++ +++++ E + Q H N+++L G ++V E M NGS
Sbjct: 44 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGS 103
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD+ F +K + V ++ + G+A+ + YL + VHRD + NI+++
Sbjct: 104 LDS--FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 152
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
+++ A+K + G +++ +++++ E + Q H N+++L G ++V E M NGS
Sbjct: 73 EISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGS 132
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD+ F +K + V ++ + G+A+ + YL + VHRD + NI+++
Sbjct: 133 LDS--FLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILIN 181
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
++ A+K + G + + ++++++E + Q H N++ L G +++ E+M NGS
Sbjct: 57 EICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 116
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LDA F +K + V ++ + G+ + + YL + VHRD + NI+++
Sbjct: 117 LDA--FLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVN 165
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
Query: 201 NFPENKMGYLIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE 260
+ E +G + AVK + + + +E++ E + +++H NLVQLLG C
Sbjct: 44 QYGEVYVGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTLEPP 102
Query: 261 FLLVYEFMPNGSLDARLFGKKRPLAWAVRYM-ISLGLATALLYLYEEWEQCVVHRDTKSS 319
F +V E+MP G+L L R AV + ++ +++A+ YL ++ +HRD +
Sbjct: 103 FYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRDLAAR 159
Query: 320 NIML 323
N ++
Sbjct: 160 NCLV 163
>pdb|2EIG|A Chain A, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|B Chain B, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|C Chain C, Lotus Tetragonolobus Seed Lectin (Isoform)
pdb|2EIG|D Chain D, Lotus Tetragonolobus Seed Lectin (Isoform)
Length = 234
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 67/157 (42%), Gaps = 41/157 (26%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSSTNHIA 84
+ F T FSF + + R G+VFFLA G +IP NS GG LG+ T S +S N
Sbjct: 59 VASFITSFSFIVSNVQRYPPTDGVVFFLAPWGTEIPPNSQGGYLGI---TDSSNSQNQFV 115
Query: 85 SEDFHRQDTA-------------DVQ---------------------IAYNSTTKNLSVS 110
+ +F DV I Y+S TK L+V
Sbjct: 116 AVEFDSHPNVWDPKSLRSSHIGIDVNSIMSLKAVNWNRVSGSLEKATIIYDSDTKILTVV 175
Query: 111 WTYRLISDPRENTSLFYIIDLMKVLSQWVTIGFSAAT 147
T++ + T++ IDL VL + V++GFSA T
Sbjct: 176 MTHQN----GQITTISQEIDLKTVLPEKVSVGFSATT 208
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
++ A+K + G +++ ++++++E + Q H N++ L G +++ EFM NGS
Sbjct: 61 EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS 120
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD+ F ++ + V ++ + G+A + YL + VHRD + NI+++
Sbjct: 121 LDS--FLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVN 169
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 15/121 (12%)
Query: 215 MAAAVKNVSRGSKQG-KKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
MA V S+ K+G + + E++ S LRH N++++ HDR L+ EF P G L
Sbjct: 43 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 102
Query: 274 DARL-----FGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVE 328
L F ++R + +M LA AL Y + E+ V+HRD K N+++ E
Sbjct: 103 YKELQKHGRFDEQR----SATFMEE--LADALHYCH---ERKVIHRDIKPENLLMGYKGE 153
Query: 329 I 329
+
Sbjct: 154 L 154
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + S+ +K ++ E++ +S++ H N+V+L G C + LV E+ GSL L
Sbjct: 36 AIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVL 91
Query: 278 FGKKRPLAWAVRYMIS--LGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G + + + +S L + + YL+ + ++HRD K N++L
Sbjct: 92 HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL 139
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 15/121 (12%)
Query: 215 MAAAVKNVSRGSKQG-KKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
MA V S+ K+G + + E++ S LRH N++++ HDR L+ EF P G L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 274 DARL-----FGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVE 328
L F ++R + +M LA AL Y + E+ V+HRD K N+++ E
Sbjct: 102 YKELQKHGRFDEQR----SATFMEE--LADALHYCH---ERKVIHRDIKPENLLMGYKGE 152
Query: 329 I 329
+
Sbjct: 153 L 153
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 15/121 (12%)
Query: 215 MAAAVKNVSRGSKQG-KKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
MA V S+ K+G + + E++ S LRH N++++ HDR L+ EF P G L
Sbjct: 42 MALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGEL 101
Query: 274 DARL-----FGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVE 328
L F ++R + +M LA AL Y + E+ V+HRD K N+++ E
Sbjct: 102 YKELQKHGRFDEQR----SATFMEE--LADALHYCH---ERKVIHRDIKPENLLMGYKGE 152
Query: 329 I 329
+
Sbjct: 153 L 153
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Query: 223 SRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-DARLFGKK 281
S K KK + E+K + QLRH NLV LL C + + LV+EF+ + L D LF
Sbjct: 61 SDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG 120
Query: 282 RPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+Y+ + + + ++HRD K NI++
Sbjct: 121 LDYQVVQKYLFQIINGIGFCHSHN-----IIHRDIKPENILV 157
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + S+ +K ++ E++ +S++ H N+V+L G C + LV E+ GSL L
Sbjct: 35 AIKQIE--SESERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVL 90
Query: 278 FGKKRPLAWAVRYMIS--LGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G + + + +S L + + YL+ + ++HRD K N++L
Sbjct: 91 HGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLL 138
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 60/114 (52%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
++ A+K + G +++ +++++ E + Q H N++ L G ++V E+M NGS
Sbjct: 50 ELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGS 109
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD F KK + V ++ + G++ + YL + VHRD + NI+++
Sbjct: 110 LDT--FLKKNDGQFTVIQLVGMLRGISAGMKYLS---DMGYVHRDLAARNILIN 158
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
++ A+K + G + + ++++++E + Q H N++ L G +++ E+M NGS
Sbjct: 36 EICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 95
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LDA F +K + V ++ + G+ + + YL + VHRD + NI+++
Sbjct: 96 LDA--FLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVN 144
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
++ A+K + G + + ++++++E + Q H N++ L G +++ E+M NGS
Sbjct: 42 EICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGS 101
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LDA F +K + V ++ + G+ + + YL + VHRD + NI+++
Sbjct: 102 LDA--FLRKNDGRFTVIQLVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVN 150
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNG 271
+M A + Q + + E+ + L H ++++ GCC D+GE LV E++P G
Sbjct: 44 EMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 272 SLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
SL R + + + A + + + + YL+ Q +HR+ + N++LD D
Sbjct: 104 SL--RDYLPRHSIGLAQLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDND 153
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 218 AVKNVSRGS-KQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSLD 274
AVK + G Q + + E++ + L H ++V+ GCC D+GE LV E++P GSL
Sbjct: 42 AVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL- 100
Query: 275 ARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
R + + + A + + + + YL+ Q +HR + N++LD D
Sbjct: 101 -RDYLPRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDND 148
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 218 AVKNVSRGSKQGKKEY---VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
A+K +S KQ +++ + EV+ + +LRH N +Q GC LV E+ GS
Sbjct: 83 AIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSAS 141
Query: 275 ARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L K+PL ++ G L YL+ ++HRD K+ NI+L
Sbjct: 142 DLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILL 187
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A K V + K+ E++T+S LRH LV L D E +++YEFM G L ++
Sbjct: 80 AAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV 139
Query: 278 FGKKRPLA--WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ ++ AV YM + L +++ E VH D K NIM
Sbjct: 140 ADEHNKMSEDEAVEYMRQ--VCKGLCHMH---ENNYVHLDLKPENIMF 182
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 218 AVKNVSRGS-KQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSLD 274
AVK + G Q + + E++ + L H ++V+ GCC D+GE LV E++P GSL
Sbjct: 41 AVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSL- 99
Query: 275 ARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
R + + + A + + + + YL+ Q +HR + N++LD D
Sbjct: 100 -RDYLPRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDND 147
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNG 271
+M A + Q + + E+ + L H ++++ GCC D+GE LV E++P G
Sbjct: 44 EMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLG 103
Query: 272 SLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
SL R + + + A + + + + YL+ Q +HR+ + N++LD D
Sbjct: 104 SL--RDYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDND 153
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 218 AVKNVSRGSKQGKKEY---VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
A+K +S KQ +++ + EV+ + +LRH N +Q GC LV E+ GS
Sbjct: 44 AIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSAS 102
Query: 275 ARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L K+PL ++ G L YL+ ++HRD K+ NI+L
Sbjct: 103 DLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILL 148
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 15/119 (12%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL--- 273
AVK + S +K++ E + ++ L+H ++V+ G C + ++V+E+M +G L
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 274 ------DARLFGKKRP---LAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
DA L + P L + I+ +A ++YL Q VHRD + N ++
Sbjct: 106 LRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLV 161
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 7/108 (6%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A K V + K+ E++T+S LRH LV L D E +++YEFM G L ++
Sbjct: 186 AAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKV 245
Query: 278 FGKKRPLA--WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ ++ AV YM + L +++ E VH D K NIM
Sbjct: 246 ADEHNKMSEDEAVEYMRQ--VCKGLCHMH---ENNYVHLDLKPENIMF 288
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRG--EFLLVYEFMPNG 271
+M A + Q + + E+ + L H ++++ GCC D G LV E++P G
Sbjct: 61 EMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLG 120
Query: 272 SLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
SL R + + + A + + + + YL+ Q +HRD + N++LD D
Sbjct: 121 SL--RDYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDND 170
>pdb|1GSL|A Chain A, Lectin (Fourth Isolated From (Griffonia Simplicifolia))
Complex With Y Human Blood Group Determinant
pdb|1LEC|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
pdb|1LED|A Chain A, Structures Of The Lectin Iv Of Griffonia Simplicifolia And
Its Complex With The Lewis B Human Blood Group
Determinant At 2.0 Angstroms Resolution
Length = 243
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 81/210 (38%), Gaps = 69/210 (32%)
Query: 2 KILYQGDAISSVGAIELTKNNE------------------YLTD-------FSTKFSFQI 36
+I + GDA GA++LTK + +L D F T F+F +
Sbjct: 21 EITFLGDATRIPGALQLTKTDANGNPVRSSAGQASYSEPVFLWDSTGKAASFYTSFTFLL 80
Query: 37 DTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLL-NTTASFSSTNHIASEDF------- 88
G PT GL FFLA V + GG LGL + TA+ S N + + +F
Sbjct: 81 KNYGAPT-ADGLAFFLAPVDSSV--KDYGGFLGLFRHETAADPSKNQVVAVEFDTWINKD 137
Query: 89 -----------------------------HRQDTADVQIAYNSTTKNLSVSWTYRLISDP 119
+ A I Y++ +K L+V +Y D
Sbjct: 138 WNDPPYPHIGIDVNSIVSVATTRWENDDAYGSSIATAHITYDARSKILTVLLSYEHGRD- 196
Query: 120 RENTSLFYIIDLMKVLSQWVTIGFSAATGH 149
L +++DL KVL Q V IGFSA G+
Sbjct: 197 ---YILSHVVDLAKVLPQKVRIGFSAGVGY 223
>pdb|1DBN|A Chain A, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
pdb|1DBN|B Chain B, Maackia Amurensis Leukoagglutinin (Lectin) With
Sialyllactose
Length = 239
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 86/212 (40%), Gaps = 57/212 (26%)
Query: 3 ILYQGDA-ISSVGAIELTK-----NNEY--------------------LTDFSTKFSFQI 36
+L+QG+A +SS G ++LTK +Y + FST F+F +
Sbjct: 18 LLFQGEASVSSTGVLQLTKVENGQPQKYSVGRALYAAPVRIWGNTTGSVASFSTSFTFVV 77
Query: 37 DTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSSTNHIASE----DFHRQD 92
GL F+LA QIP S LGL N + S SS +A E H D
Sbjct: 78 KAPNPDITSDGLAFYLAPPDSQIPSGSVSKYLGLFNNSNSDSSNQIVAVEFDTYFAHSYD 137
Query: 93 TAD-----VQIAYNSTTKNLSVSWTY-----------------RLISD---PRENT--SL 125
D + I N +V W + LI+ P T S+
Sbjct: 138 PWDPNYRHIGIDVNGIESIKTVQWDWINGGVAFATITYLAPNKTLIASLVYPSNQTTFSV 197
Query: 126 FYIIDLMKVLSQWVTIGFSAATGHCSDNGTVD 157
+DL ++L +WV +GFSAATG+ ++ T D
Sbjct: 198 AASVDLKEILPEWVRVGFSAATGYPTEVETHD 229
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS-L 273
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+ L
Sbjct: 39 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
D ++ ++ V ++ +++A+ YL ++ +HRD + N ++
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 144
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS-L 273
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+ L
Sbjct: 37 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 95
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
D ++ ++ V ++ +++A+ YL ++ +HRD + N ++
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 142
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 231 KEYVTEVKTISQLRHRNLVQLLGC-CHDRGEFLLVYEFMPNGSLDARLFGKKRP-LAWAV 288
+ ++ E ++QLRH NLVQLLG ++G +V E+M GSL L + R L
Sbjct: 50 QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDC 109
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
SL + A+ YL VHRD + N+++ D
Sbjct: 110 LLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSED 144
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS-L 273
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+ L
Sbjct: 39 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 97
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
D ++ ++ V ++ +++A+ YL ++ +HRD + N ++
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 144
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 233 YVTEVKTISQLRHRNLVQLLGC-CHDRGEFLLVYEFMPNGSLDARLFGKKRP-LAWAVRY 290
++ E ++QLRH NLVQLLG ++G +V E+M GSL L + R L
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 120
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
SL + A+ YL VHRD + N+++ D
Sbjct: 121 KFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSED 153
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 201 NFPENKMGYLIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE 260
F E G + AVK + + + +E++ E + +++H NLVQLLG C
Sbjct: 23 QFGEVYEGVWKKYSLTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPP 81
Query: 261 FLLVYEFMPNGS-LDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
F ++ EFM G+ LD ++ ++ V ++ +++A+ YL ++ +HRD +
Sbjct: 82 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAAR 138
Query: 320 NIML 323
N ++
Sbjct: 139 NCLV 142
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 232 EYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLF---GKKRPLAWAV 288
E++ EV + +LRH N+V +G +V E++ GSL RL G + L
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSL-YRLLHKSGAREQLDERR 138
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
R ++ +A + YL+ +VHRD KS N+++D
Sbjct: 139 RLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVD 173
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS-L 273
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+ L
Sbjct: 44 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
D ++ ++ V ++ +++A+ YL ++ +HRD + N ++
Sbjct: 103 DYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 149
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS-L 273
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+ L
Sbjct: 39 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
D ++ ++ V ++ +++A+ YL ++ +HRD + N ++
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 144
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 233 YVTEVKTISQLRHRNLVQLLGC-CHDRGEFLLVYEFMPNGSLDARLFGKKRP-LAWAVRY 290
++ E ++QLRH NLVQLLG ++G +V E+M GSL L + R L
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 292
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
SL + A+ YL VHRD + N+++ D
Sbjct: 293 KFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSED 325
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS-L 273
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+ L
Sbjct: 39 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
D ++ ++ V ++ +++A+ YL ++ +HRD + N ++
Sbjct: 98 DYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 144
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMP 269
LI L++ A++N + + E++ + + +V G + GE + E M
Sbjct: 48 LIHLEIKPAIRN----------QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 97
Query: 270 NGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
GSLD L KR + + +S+ + L YL E+ + ++HRD K SNI+++ EI
Sbjct: 98 GGSLDQVLKEAKR-IPEEILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEI 154
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 30/125 (24%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEF-LLVYEFMPNG 271
D+ A+K + G +++ ++++++E + Q H N+++L G RG ++V E+M NG
Sbjct: 77 DVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-TRGRLAMIVTEYMENG 135
Query: 272 SLDA------------RLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
SLD +L G R + +RY+ LG VHRD +
Sbjct: 136 SLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY---------------VHRDLAAR 180
Query: 320 NIMLD 324
N+++D
Sbjct: 181 NVLVD 185
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 30/125 (24%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEF-LLVYEFMPNG 271
D+ A+K + G +++ ++++++E + Q H N+++L G RG ++V E+M NG
Sbjct: 77 DVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV-TRGRLAMIVTEYMENG 135
Query: 272 SLDA------------RLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
SLD +L G R + +RY+ LG VHRD +
Sbjct: 136 SLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY---------------VHRDLAAR 180
Query: 320 NIMLD 324
N+++D
Sbjct: 181 NVLVD 185
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 233 YVTEVKTISQLRHRNLVQLLGC-CHDRGEFLLVYEFMPNGSLDARLFGKKRP-LAWAVRY 290
++ E ++QLRH NLVQLLG ++G +V E+M GSL L + R L
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
SL + A+ YL VHRD + N+++ D
Sbjct: 106 KFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSED 138
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS-L 273
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+ L
Sbjct: 37 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 95
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
D ++ ++ V ++ +++A+ YL ++ +HRD + N ++
Sbjct: 96 DYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 142
>pdb|1QMO|E Chain E, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|F Chain F, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|G Chain G, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
pdb|1QMO|H Chain H, Structure Of Fril, A Legume Lectin That Delays
Hematopoietic Progenitor Maturation
Length = 133
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 84 ASEDFHRQDTADVQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDLMKVLSQWVTIGF 143
A D+ A I+YNS +K LSV+ +Y S P +L Y I+L VL +WV +G
Sbjct: 37 AKWDWQNGKIATAHISYNSVSKRLSVT-SYYAGSKP---ATLSYDIELHTVLPEWVRVGL 92
Query: 144 SAATGHCSDNGTV 156
SA+TG + TV
Sbjct: 93 SASTGQDKERNTV 105
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 18/128 (14%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL- 273
M AVK + + +K++ E + ++ L+H ++V+ G C D ++V+E+M +G L
Sbjct: 46 MLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLN 105
Query: 274 --------DARLFGKKRP------LAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
DA + +P L + I+ +A+ ++YL Q VHRD +
Sbjct: 106 KFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA---SQHFVHRDLATR 162
Query: 320 NIMLDVDV 327
N ++ ++
Sbjct: 163 NCLVGANL 170
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+L
Sbjct: 44 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 102
Query: 275 ARLFGKKRPLAWAVRYM-ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L R AV + ++ +++A+ YL ++ +HRD + N ++
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 149
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+L
Sbjct: 40 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLL 98
Query: 275 ARLFGKKRPLAWAVRYM-ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L R AV + ++ +++A+ YL ++ +HRD + N ++
Sbjct: 99 DYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 145
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 16/113 (14%)
Query: 221 NVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR---- 276
N+SR S + ++E EV ++ ++H N+VQ + G +V ++ G L R
Sbjct: 58 NISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQ 117
Query: 277 ---LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
LF + + L W V+ + AL ++++ ++HRD KS NI L D
Sbjct: 118 KGVLFQEDQILDWFVQ------ICLALKHVHDRK---ILHRDIKSQNIFLTKD 161
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 28/158 (17%)
Query: 180 DLERGAVPRRFFYRDLASATSNFPENKMGYLIDLDMAAAVKNVSRGSKQGKKEYVTEVKT 239
+L GA + F LA + PE M AVK + S+ ++++ E +
Sbjct: 48 ELGEGAFGKVF----LAECHNLLPEQD-------KMLVAVKALKEASESARQDFQREAEL 96
Query: 240 ISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL---------DARLFGKKR-----PLA 285
++ L+H+++V+ G C + L+V+E+M +G L DA+L PL
Sbjct: 97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG 156
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
++ +A ++YL VHRD + N ++
Sbjct: 157 LGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLV 191
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+L
Sbjct: 44 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 275 ARLFGKKRPLAWAVRYM-ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L R AV + ++ +++A+ YL ++ +HRD + N ++
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 149
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+L
Sbjct: 44 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 275 ARLFGKKRPLAWAVRYM-ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L R AV + ++ +++A+ YL ++ +HRD + N ++
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 149
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+L
Sbjct: 52 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 110
Query: 275 ARLFGKKRPLAWAVRYM-ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L R AV + ++ +++A+ YL ++ +HRD + N ++
Sbjct: 111 DYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 157
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+L
Sbjct: 39 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 275 ARLFGKKRPLAWAVRYM-ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L R AV + ++ +++A+ YL ++ +HRD + N ++
Sbjct: 98 DYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 144
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+L
Sbjct: 43 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 101
Query: 275 ARLFGKKRPLAWAVRYM-ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L R AV + ++ +++A+ YL ++ +HRD + N ++
Sbjct: 102 DYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 148
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+L
Sbjct: 40 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 98
Query: 275 ARLFGKKRPLAWAVRYM-ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L R AV + ++ +++A+ YL ++ +HRD + N ++
Sbjct: 99 DYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 145
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+L
Sbjct: 44 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 102
Query: 275 ARLFGKKRPLAWAVRYM-ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L R AV + ++ +++A+ YL ++ +HRD + N ++
Sbjct: 103 DYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 149
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 24/143 (16%)
Query: 195 LASATSNFPENKMGYLIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGC 254
LA + PE M AVK + S+ ++++ E + ++ L+H+++V+ G
Sbjct: 36 LAECHNLLPEQD-------KMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGV 88
Query: 255 CHDRGEFLLVYEFMPNGSL---------DARLFGKKR-----PLAWAVRYMISLGLATAL 300
C + L+V+E+M +G L DA+L PL ++ +A +
Sbjct: 89 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM 148
Query: 301 LYLYEEWEQCVVHRDTKSSNIML 323
+YL VHRD + N ++
Sbjct: 149 VYLA---GLHFVHRDLATRNCLV 168
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+L
Sbjct: 41 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 275 ARLFGKKRPLAWAVRYM-ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L R AV + ++ +++A+ YL ++ +HRD + N ++
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 146
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+L
Sbjct: 41 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 275 ARLFGKKRPLAWAVRYM-ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L R AV + ++ +++A+ YL ++ +HRD + N ++
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 146
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Query: 217 AAVKNVSR---GSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
AVK +S+ K K+ + EV+ + QL H N+++L D+G F LV E G L
Sbjct: 54 CAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL 113
Query: 274 DARLFGKKR----PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ +KR A +R ++S + Y++ + +VHRD K N++L+
Sbjct: 114 FDEIISRKRFSEVDAARIIRQVLS-----GITYMH---KNKIVHRDLKPENLLLE 160
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+L
Sbjct: 41 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 99
Query: 275 ARLFGKKRPLAWAVRYM-ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L R AV + ++ +++A+ YL ++ +HRD + N ++
Sbjct: 100 DYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 146
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 67 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 126
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A Y ++ VHRD + N M
Sbjct: 127 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCM 183
Query: 323 LD 324
LD
Sbjct: 184 LD 185
>pdb|2E7Q|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7Q|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Trisaccharide
pdb|2E7T|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
pdb|2E7T|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Trisaccharide
Length = 237
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 63/157 (40%), Gaps = 37/157 (23%)
Query: 25 LTDFSTKFSFQI-DTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFS----- 78
+ F T+FSF I RP GLVFF+A Q GG G+ N + +
Sbjct: 65 VASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQT--GEGGGYFGIYNPLSPYPFVAVE 122
Query: 79 ----------STNHIASE------------DFHRQDTADVQIAYNSTTKNLSVSWTYRLI 116
HI + A+V I Y+++TK L V +
Sbjct: 123 FDTFRNTWDPQIPHIGIDVNSVISTKTVPFTLDNGGIANVVIKYDASTKILHVVLVF--- 179
Query: 117 SDPRENT--SLFYIIDLMKVLSQWVTIGFSAATGHCS 151
P T ++ I+DL +VL + V +GFSAATG S
Sbjct: 180 --PSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPS 214
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+L
Sbjct: 39 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 97
Query: 275 ARLFGKKRPLAWAVRYM-ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L R AV + ++ +++A+ YL ++ +HRD + N ++
Sbjct: 98 DYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLV 144
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 24/143 (16%)
Query: 195 LASATSNFPENKMGYLIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGC 254
LA + PE M AVK + S+ ++++ E + ++ L+H+++V+ G
Sbjct: 30 LAECHNLLPEQD-------KMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGV 82
Query: 255 CHDRGEFLLVYEFMPNGSL---------DARLFGKKR-----PLAWAVRYMISLGLATAL 300
C + L+V+E+M +G L DA+L PL ++ +A +
Sbjct: 83 CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGM 142
Query: 301 LYLYEEWEQCVVHRDTKSSNIML 323
+YL VHRD + N ++
Sbjct: 143 VYLA---GLHFVHRDLATRNCLV 162
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 218 AVKNVSR---GSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
AVK +S+ K K+ + EV+ + QL H N+++L D+G F LV E G L
Sbjct: 78 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 137
Query: 275 ARLFGKKR----PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ +KR A +R ++S + Y++ + +VHRD K N++L+
Sbjct: 138 DEIISRKRFSEVDAARIIRQVLS-----GITYMH---KNKIVHRDLKPENLLLE 183
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 48 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 107
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A Y ++ VHRD + N M
Sbjct: 108 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCM 164
Query: 323 LD 324
LD
Sbjct: 165 LD 166
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 15/114 (13%)
Query: 218 AVKNVSR---GSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
AVK +S+ K K+ + EV+ + QL H N+++L D+G F LV E G L
Sbjct: 79 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF 138
Query: 275 ARLFGKKR----PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ +KR A +R ++S + Y++ + +VHRD K N++L+
Sbjct: 139 DEIISRKRFSEVDAARIIRQVLS-----GITYMH---KNKIVHRDLKPENLLLE 184
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 63/117 (53%), Gaps = 8/117 (6%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
++ A+K + G +++ + +++ E + Q H N+++L G +++ E+M NG+
Sbjct: 73 EVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGA 132
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLDVDV 327
LD F +++ ++V ++ + G+A + YL VHRD + NI+++ ++
Sbjct: 133 LDK--FLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNL 184
>pdb|1WBF|A Chain A, Winged Bean Lectin, Saccharide Free Form
pdb|1WBF|B Chain B, Winged Bean Lectin, Saccharide Free Form
pdb|2D3S|A Chain A, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|B Chain B, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|C Chain C, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
pdb|2D3S|D Chain D, Crystal Structure Of Basic Winged Bean Lectin With
Tn-Antigen
Length = 242
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 63/157 (40%), Gaps = 37/157 (23%)
Query: 25 LTDFSTKFSFQI-DTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFS----- 78
+ F T+FSF I RP GLVFF+A Q GG G+ N + +
Sbjct: 66 VASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQT--GEGGGYFGIYNPLSPYPFVAVE 123
Query: 79 ----------STNHIASE------------DFHRQDTADVQIAYNSTTKNLSVSWTYRLI 116
HI + A+V I Y+++TK L V +
Sbjct: 124 FDTFRNTWDPQIPHIGIDVNSVISTKTVPFTLDNGGIANVVIKYDASTKILHVVLVF--- 180
Query: 117 SDPRENT--SLFYIIDLMKVLSQWVTIGFSAATGHCS 151
P T ++ I+DL +VL + V +GFSAATG S
Sbjct: 181 --PSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPS 215
>pdb|1WBL|A Chain A, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|B Chain B, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|C Chain C, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|1WBL|D Chain D, Winged Bean Lectin Complexed With Methyl-Alpha-D-Galactose
pdb|2DTW|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTW|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With 2me-O-D- Galactose
pdb|2DTY|A Chain A, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|B Chain B, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|C Chain C, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DTY|D Chain D, Crystal Structure Of Basic Winged Bean Lectin Complexed
With N-Acetyl- D-Galactosamine
pdb|2DU0|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU0|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Alpha-D- Galactose
pdb|2DU1|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2DU1|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Methyl- Alpha-N-Acetyl-D Galactosamine
pdb|2E51|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E51|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With A Blood Group Disaccharide
pdb|2E53|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2E53|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With B Blood Group Disaccharide
pdb|2ZMK|A Chain A, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|B Chain B, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|C Chain C, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZMK|D Chain D, Crystl Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha-1,4-gal-beta-ethylene
pdb|2ZML|A Chain A, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|B Chain B, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|C Chain C, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZML|D Chain D, Crystal Stucture Of Basic Winged Bean Lectin In Complex
With Gal-Alpha 1,4 Gal
pdb|2ZMN|A Chain A, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|B Chain B, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|C Chain C, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
pdb|2ZMN|D Chain D, Crystal Structure Of Basic Winged Bean Lectin In Complex
With Gal- Alpha- 1,6 Glc
Length = 241
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 63/157 (40%), Gaps = 37/157 (23%)
Query: 25 LTDFSTKFSFQI-DTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFS----- 78
+ F T+FSF I RP GLVFF+A Q GG G+ N + +
Sbjct: 65 VASFETRFSFSIRQPFPRPHPADGLVFFIAPPNTQT--GEGGGYFGIYNPLSPYPFVAVE 122
Query: 79 ----------STNHIASE------------DFHRQDTADVQIAYNSTTKNLSVSWTYRLI 116
HI + A+V I Y+++TK L V +
Sbjct: 123 FDTFRNTWDPQIPHIGIDVNSVISTKTVPFTLDNGGIANVVIKYDASTKILHVVLVF--- 179
Query: 117 SDPRENT--SLFYIIDLMKVLSQWVTIGFSAATGHCS 151
P T ++ I+DL +VL + V +GFSAATG S
Sbjct: 180 --PSLGTIYTIADIVDLKQVLPESVNVGFSAATGDPS 214
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 49 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 108
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A Y ++ VHRD + N M
Sbjct: 109 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCM 165
Query: 323 LD 324
LD
Sbjct: 166 LD 167
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 68 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 127
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A Y ++ VHRD + N M
Sbjct: 128 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCM 184
Query: 323 LD 324
LD
Sbjct: 185 LD 186
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 41 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 100
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A Y ++ VHRD + N M
Sbjct: 101 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCM 157
Query: 323 LD 324
LD
Sbjct: 158 LD 159
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 47 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 106
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A Y ++ VHRD + N M
Sbjct: 107 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCM 163
Query: 323 LD 324
LD
Sbjct: 164 LD 165
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 48 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 107
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A Y ++ VHRD + N M
Sbjct: 108 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCM 164
Query: 323 LD 324
LD
Sbjct: 165 LD 166
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 49 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 108
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A Y ++ VHRD + N M
Sbjct: 109 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCM 165
Query: 323 LD 324
LD
Sbjct: 166 LD 167
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 217 AAVKNVSRGSKQGKKE-YVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GS 272
A+K V S++G + E+ + +L+H N+V+L H + LV+EFM N
Sbjct: 33 VALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKY 92
Query: 273 LDARLFGK-KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+D+R G R L + L L + + E ++HRD K N++++
Sbjct: 93 MDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLIN 142
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 44 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A Y ++ VHRD + N M
Sbjct: 104 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCM 160
Query: 323 LD 324
LD
Sbjct: 161 LD 162
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 46 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 105
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A Y ++ VHRD + N M
Sbjct: 106 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKK-FVHRDLAARNCM 162
Query: 323 LD 324
LD
Sbjct: 163 LD 164
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 214 DMAAAVKNVSRG-SKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
++ A+K + G +++ ++++++E + Q H N++ L G +++ EFM NGS
Sbjct: 35 EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGS 94
Query: 273 LDARLFGKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
LD+ F ++ + V ++ + G+A + YL + VHR + NI+++
Sbjct: 95 LDS--FLRQNDGQFTVIQLVGMLRGIAAGMKYLA---DMNYVHRALAARNILVN 143
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 215 MAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS-L 273
+ AVK + + + +E++ E + +++H NLVQLLG C F ++ EFM G+ L
Sbjct: 246 LTVAVKTLKEDTME-VEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLL 304
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
D ++ ++ V ++ +++A+ YL ++ +HR+ + N ++
Sbjct: 305 DYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLV 351
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 13/114 (11%)
Query: 218 AVKNVSRGSKQGKKEYVT-----EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
A+K + G + K+ + E+K + +L H N++ LL + LV++FM
Sbjct: 39 AIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFM---E 95
Query: 273 LDARLFGKKRPLAWAVRYMISLGLAT--ALLYLYEEWEQCVVHRDTKSSNIMLD 324
D + K L ++ + L T L YL++ W ++HRD K +N++LD
Sbjct: 96 TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLD 146
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 232 EYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLF--GKKRPLAWAVR 289
E++ EV + +LRH N+V +G +V E++ GSL L G + L R
Sbjct: 80 EFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRR 139
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
++ +A + YL+ +VHR+ KS N+++D
Sbjct: 140 LSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVD 173
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + + + E+ L+H+N+VQ LG + G + E +P GSL A L
Sbjct: 37 AIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALL 96
Query: 278 FGKKRPLAWAVRYMISLGLAT-----ALLYLYEEWEQCVVHRDTKSSNIMLD 324
K PL + ++G T L YL++ +VHRD K N++++
Sbjct: 97 RSKWGPLKDNEQ---TIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLIN 142
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G + L F ++R +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE- 121
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 122 -----LANALSYCH---SKRVIHRDIKPENLLL 146
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMP 269
LI L++ A++N + + E++ + + +V G + GE + E M
Sbjct: 100 LIHLEIKPAIRN----------QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 149
Query: 270 NGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
GSLD L R + + +S+ + L YL E+ + ++HRD K SNI+++ EI
Sbjct: 150 GGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEI 206
>pdb|1IOA|A Chain A, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus
Vulgaris
pdb|1IOA|B Chain B, Arcelin-5, A Lectin-Like Defense Protein From Phaseolus
Vulgaris
Length = 240
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 55/201 (27%)
Query: 2 KILYQGDA-ISSVGAIELT------------------------KNNEYLTDFSTKFSFQI 36
K++ QG+A ISS G ++LT K++ + F+T F+F I
Sbjct: 16 KLILQGNATISSKGQLQLTGVGSNELPRVDSLGRAFYSDPIQIKDSNNVASFNTNFTFII 75
Query: 37 DTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSSTNHIA------------ 84
+ +GL F A V + P LG+ NT + +A
Sbjct: 76 RAKNQSISAYGLAF--ALVPVNSPPQKKQEFLGIFNTNNPEPNARTVAVVFNTFKNRIDF 133
Query: 85 -----------SEDFHRQ--DTADVQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDL 131
+ DFH+ + DVQI Y+S+ +L V + + + S+ + L
Sbjct: 134 DKNFIKPYVNENCDFHKYNGEKTDVQITYDSSNNDLRVFLHFTV---SQVKCSVSATVHL 190
Query: 132 MKVLSQWVTIGFSAATGHCSD 152
K + +WV++GFS +G D
Sbjct: 191 EKEVDEWVSVGFSPTSGLTED 211
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 11/112 (9%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + + + E+ L+H+N+VQ LG + G + E +P GSL A L
Sbjct: 51 AIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALL 110
Query: 278 FGKKRPLAWAVRYMISLGLAT-----ALLYLYEEWEQCVVHRDTKSSNIMLD 324
K PL + ++G T L YL++ +VHRD K N++++
Sbjct: 111 RSKWGPLKDNEQ---TIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLIN 156
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G + L F ++R +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITE- 121
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 122 -----LANALSYCH---SKRVIHRDIKPENLLL 146
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
Query: 217 AAVKNVSR---GSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
AVK +S+ K K+ + EV+ + QL H N+++L D+G F LV E G L
Sbjct: 60 CAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGEL 119
Query: 274 DARLFGKKR----PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ +KR A +R ++S + Y++ + +VHRD K N++L+
Sbjct: 120 FDEIISRKRFSEVDAARIIRQVLS-----GITYMH---KNKIVHRDLKPENLLLE 166
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 108 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A + ++ VHRD + N M
Sbjct: 168 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCM 224
Query: 323 LD 324
LD
Sbjct: 225 LD 226
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMP 269
LI L++ A++N + + E++ + + +V G + GE + E M
Sbjct: 38 LIHLEIKPAIRN----------QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 87
Query: 270 NGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
GSLD L R + + +S+ + L YL E+ + ++HRD K SNI+++ EI
Sbjct: 88 GGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEI 144
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 50 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 109
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A + ++ VHRD + N M
Sbjct: 110 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCM 166
Query: 323 LD 324
LD
Sbjct: 167 LD 168
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 13/120 (10%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMP 269
LI L++ A++N + + E++ + + +V G + GE + E M
Sbjct: 57 LIHLEIKPAIRN----------QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 106
Query: 270 NGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
GSLD ++ K + + +S+ + L YL E+ + ++HRD K SNI+++ EI
Sbjct: 107 GGSLD-QVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEI 163
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 50 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 109
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A + ++ VHRD + N M
Sbjct: 110 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCM 166
Query: 323 LD 324
LD
Sbjct: 167 LD 168
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 49 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 108
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A + ++ VHRD + N M
Sbjct: 109 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCM 165
Query: 323 LD 324
LD
Sbjct: 166 LD 167
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 213 LDMAAAVKNVSR-GSKQGKKEYVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPN 270
L M AA+K + SK +++ E++ + +L H N++ LLG C RG L E+ P+
Sbjct: 41 LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 100
Query: 271 GSL 273
G+L
Sbjct: 101 GNL 103
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 49 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 108
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A + ++ VHRD + N M
Sbjct: 109 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCM 165
Query: 323 LD 324
LD
Sbjct: 166 LD 167
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 54 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 113
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A + ++ VHRD + N M
Sbjct: 114 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCM 170
Query: 323 LD 324
LD
Sbjct: 171 LD 172
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 8/122 (6%)
Query: 208 GYLIDLD---MAAAVKNVSRGSKQGK-KEYVTEVKTISQLRHRNLVQLLGCC-HDRGEFL 262
G L+D D + AVK+++R + G+ +++TE + H N++ LLG C G L
Sbjct: 47 GTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 106
Query: 263 LVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+V +M +G D R F + V+ +I GL A + ++ VHRD + N M
Sbjct: 107 VVLPYMKHG--DLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKK-FVHRDLAARNCM 163
Query: 323 LD 324
LD
Sbjct: 164 LD 165
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMP 269
LI L++ A++N + + E++ + + +V G + GE + E M
Sbjct: 38 LIHLEIKPAIRN----------QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 87
Query: 270 NGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
GSLD L R + + +S+ + L YL E+ + ++HRD K SNI+++ EI
Sbjct: 88 GGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEI 144
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 213 LDMAAAVKNVSR-GSKQGKKEYVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPN 270
L M AA+K + SK +++ E++ + +L H N++ LLG C RG L E+ P+
Sbjct: 48 LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 107
Query: 271 GSL 273
G+L
Sbjct: 108 GNL 110
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE- 120
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
LA AL Y + + V+HRD K N++L + E+
Sbjct: 121 -----LANALSYCH---SKRVIHRDIKPENLLLGSNGEL 151
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 213 LDMAAAVKNVSR-GSKQGKKEYVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPN 270
L M AA+K + SK +++ E++ + +L H N++ LLG C RG L E+ P+
Sbjct: 51 LRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 110
Query: 271 GSL 273
G+L
Sbjct: 111 GNL 113
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMP 269
LI L++ A++N + + E++ + + +V G + GE + E M
Sbjct: 41 LIHLEIKPAIRN----------QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 90
Query: 270 NGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
GSLD L R + + +S+ + L YL E+ + ++HRD K SNI+++ EI
Sbjct: 91 GGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEI 147
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMP 269
LI L++ A++N + + E++ + + +V G + GE + E M
Sbjct: 38 LIHLEIKPAIRN----------QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 87
Query: 270 NGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
GSLD L R + + +S+ + L YL E+ + ++HRD K SNI+++ EI
Sbjct: 88 GGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEI 144
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMP 269
LI L++ A++N + + E++ + + +V G + GE + E M
Sbjct: 65 LIHLEIKPAIRN----------QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 114
Query: 270 NGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
GSLD L R + + +S+ + L YL E+ + ++HRD K SNI+++ EI
Sbjct: 115 GGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEI 171
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITE- 120
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
LA AL Y + + V+HRD K N++L + E+
Sbjct: 121 -----LANALSYCH---SKRVIHRDIKPENLLLGSNGEL 151
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMP 269
LI L++ A++N + + E++ + + +V G + GE + E M
Sbjct: 38 LIHLEIKPAIRN----------QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 87
Query: 270 NGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
GSLD L R + + +S+ + L YL E+ + ++HRD K SNI+++ EI
Sbjct: 88 GGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEI 144
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMP 269
LI L++ A++N + + E++ + + +V G + GE + E M
Sbjct: 38 LIHLEIKPAIRN----------QIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 87
Query: 270 NGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
GSLD L R + + +S+ + L YL E+ + ++HRD K SNI+++ EI
Sbjct: 88 GGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEI 144
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 231 KEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRY 290
+E++ E + +++H NLVQLLG C F ++ EFM G+L L R AV
Sbjct: 300 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 359
Query: 291 M-ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ ++ +++A+ YL ++ +HR+ + N ++
Sbjct: 360 LYMATQISSAMEYLE---KKNFIHRNLAARNCLV 390
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 231 KEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRY 290
+E++ E + +++H NLVQLLG C F ++ EFM G+L L R AV
Sbjct: 258 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVL 317
Query: 291 M-ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ ++ +++A+ YL ++ +HR+ + N ++
Sbjct: 318 LYMATQISSAMEYLE---KKNFIHRNLAARNCLV 348
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 15/115 (13%)
Query: 217 AAVKNVSR---GSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
AVK +S+ K K+ + EV+ + QL H N+ +L D+G F LV E G L
Sbjct: 54 CAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGEL 113
Query: 274 DARLFGKKR----PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ +KR A +R ++S + Y + + +VHRD K N++L+
Sbjct: 114 FDEIISRKRFSEVDAARIIRQVLS-----GITYXH---KNKIVHRDLKPENLLLE 160
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 116
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 117 -----LANALSYCH---SKKVIHRDIKPENLLL 141
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 117
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 118 -----LANALSYCH---SKRVIHRDIKPENLLL 142
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ EF+P GSL
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL 103
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L K + + + + YL + +HRD + NI+++
Sbjct: 104 REYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 151
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 120
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 121 -----LANALSYCH---SKRVIHRDIKPENLLL 145
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 121
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 122 -----LANALSYCH---SKRVIHRDIKPENLLL 146
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 119
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 120 -----LANALSYCH---SKRVIHRDIKPENLLL 144
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 142
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 143 -----LANALSYCH---SKRVIHRDIKPENLLL 167
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 119
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 120 -----LANALSYCH---SKRVIHRDIKPENLLL 144
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 121
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 122 -----LANALSYCH---SKRVIHRDIKPENLLL 146
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
A+K + GS + E++ E K + L H LVQL G C + ++ E+M NG L
Sbjct: 31 VAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 89
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L + + + A+ YL E +Q +HRD + N +++
Sbjct: 90 LREMRHRFQTQQLLEMCKDVCEAMEYL--ESKQ-FLHRDLAARNCLVN 134
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 118
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 119 -----LANALSYCH---SKRVIHRDIKPENLLL 143
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 133
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 134 -----LANALSYCH---SKRVIHRDIKPENLLL 158
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 119
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 120 -----LANALSYCH---SKRVIHRDIKPENLLL 144
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 115
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 116 -----LANALSYCH---SKRVIHRDIKPENLLL 140
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 119
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 120 -----LANALSYCH---SKRVIHRDIKPENLLL 144
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 117
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 118 -----LANALSYCH---SKRVIHRDIKPENLLL 142
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 119
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 120 -----LANALSYCH---SKRVIHRDIKPENLLL 144
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 113
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 114 -----LANALSYCH---SKRVIHRDIKPENLLL 138
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 117
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 118 -----LANALSYCH---SKRVIHRDIKPENLLL 142
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 121
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 122 -----LANALSYCH---SKRVIHRDIKPENLLL 146
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 142
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 143 -----LANALSYCH---SKRVIHRDIKPENLLL 167
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 116
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 117 -----LANALSYCH---SKRVIHRDIKPENLLL 141
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
A+K + GS + E++ E K + L H LVQL G C + ++ E+M NG L
Sbjct: 35 VAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 90
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 116
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 117 -----LANALSYCH---SKRVIHRDIKPENLLL 141
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
A+K + GS + E++ E K + L H LVQL G C + ++ E+M NG L
Sbjct: 36 VAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 94
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L + + + A+ YL E +Q +HRD + N +++
Sbjct: 95 LREMRHRFQTQQLLEMCKDVCEAMEYL--ESKQ-FLHRDLAARNCLVN 139
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 116
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 117 -----LANALSYCH---SKRVIHRDIKPENLLL 141
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 116
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 117 -----LANALSYCH---SKRVIHRDIKPENLLL 141
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 116
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 117 -----LANALSYCH---SKRVIHRDIKPENLLL 141
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 116
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 117 -----LANALSYCH---SKRVIHRDIKPENLLL 141
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
A+K + GS + E++ E K + L H LVQL G C + ++ E+M NG L
Sbjct: 42 VAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 97
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 118
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 119 -----LANALSYCH---SKRVIHRDIKPENLLL 143
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 116
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 117 -----LANALSYCH---SKRVIHRDIKPENLLL 141
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
EV+ S LRH N+++L G HD L+ E+ P G++ L F ++R +
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITE- 119
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
LA AL Y + + V+HRD K N++L
Sbjct: 120 -----LANALSYCH---SKRVIHRDIKPENLLL 144
>pdb|3N35|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) With N-
Acetylgalactosamine
pdb|3N36|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Galactose
pdb|3N3H|A Chain A, Erythrina Corallodendron Lectin Mutant (Y106g) In Complex
With Citrate
Length = 242
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 66/162 (40%), Gaps = 41/162 (25%)
Query: 25 LTDFSTKFSFQID-TLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTA-------- 75
+ F T+FSF I+ RP GLVFF+ + GG LG+ N +
Sbjct: 67 VASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSK--PAQGGGYLGIFNNSKQDNSYQTL 124
Query: 76 -----SFS----------------STNHIASEDFHRQD--TADVQIAYNSTTKNLSVSWT 112
+FS S I ++ F + A+V I Y++++K L
Sbjct: 125 GVEFDTFSNQWDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVIKYDASSKILHAVLV 184
Query: 113 YRLISDPRENT--SLFYIIDLMKVLSQWVTIGFSAATGHCSD 152
Y P ++ I+D+ +VL +WV +G S ATG D
Sbjct: 185 Y-----PSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRD 221
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 4/108 (3%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
A+K + GS + E++ E K + L H LVQL G C + ++ E+M NG L
Sbjct: 51 VAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNY 109
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L + + + A+ YL E +Q +HRD + N +++
Sbjct: 110 LREMRHRFQTQQLLEMCKDVCEAMEYL--ESKQ-FLHRDLAARNCLVN 154
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
A+K + GS + E++ E K + L H LVQL G C + ++ E+M NG L
Sbjct: 51 VAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 106
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
A+K + GS + E++ E K + L H LVQL G C + ++ E+M NG L
Sbjct: 36 VAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCL 91
>pdb|1N47|A Chain A, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|B Chain B, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|C Chain C, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
pdb|1N47|D Chain D, Isolectin B4 From Vicia Villosa In Complex With The Tn
Antigen
Length = 233
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 63/160 (39%), Gaps = 39/160 (24%)
Query: 21 NNEYLTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSST 80
+N L F+T FSF + GL FFLA Q + GG LGL A +S
Sbjct: 60 DNTTLASFTTSFSFVMAAPAAAAVADGLAFFLAPPDTQP--QARGGFLGLFADRAHDASY 117
Query: 81 NHIASE------------------------------DFHRQDTADVQIAYNSTTKNLSVS 110
+A E D + A++ I Y ++TK L+ S
Sbjct: 118 QTVAVEFDTYSNAWDPNYTHIGIDTNGIESKKTTPFDMVYGEKANIVITYQASTKALAAS 177
Query: 111 WTYRLISDPRENTS--LFYIIDLMKVLSQWVTIGFSAATG 148
+ P TS + +DL +L ++V +GFSA TG
Sbjct: 178 LVF-----PVSQTSYAVSARVDLRDILPEYVRVGFSATTG 212
>pdb|2SBA|A Chain A, Soybean Agglutinin Complexed With 2,6-Pentasaccharide
pdb|1G9F|A Chain A, Crystal Structure Of The Soybean Agglutinin In A Complex
With A Biantennary Blood Group Antigen Analog
pdb|1SBD|A Chain A, Soybean Agglutinin Complexed With 2,4-pentasaccharide
pdb|1SBE|A Chain A, Soybean Agglutinin From Glycine Max
pdb|1SBF|A Chain A, Soybean Agglutinin
Length = 253
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 75/205 (36%), Gaps = 64/205 (31%)
Query: 1 KKILYQGDAI-SSVGAIELTKNNE--------------------------YLTDFSTKFS 33
++ QGDAI +S G ++L K +E + F+ F+
Sbjct: 16 PNMILQGDAIVTSSGKLQLNKVDENGTPKPSSLGRALYSTPIHIWDKETGSVASFAASFN 75
Query: 34 FQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTA---------------SFS 78
F GL FFLA + + + G LGL N S+
Sbjct: 76 FTFYAPDTKRLADGLAFFLAPIDTKP--QTHAGYLGLFNENESGDQVVAVEFDTFRNSWD 133
Query: 79 STN-HIA------------SEDFHRQDTADVQIAYNSTTKNLSVSWTYRLISDPRENTS- 124
N HI S D A V I Y+++T L S Y P + TS
Sbjct: 134 PPNPHIGINVNSIRSIKTTSWDLANNKVAKVLITYDASTSLLVASLVY-----PSQRTSN 188
Query: 125 -LFYIIDLMKVLSQWVTIGFSAATG 148
L ++DL L +WV IGFSAATG
Sbjct: 189 ILSDVVDLKTSLPEWVRIGFSAATG 213
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/106 (20%), Positives = 51/106 (48%), Gaps = 3/106 (2%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
+K + R ++ ++ ++ EVK + L H N+++ +G + + E++ G+L +
Sbjct: 39 VMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII 98
Query: 278 FGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
W+ R + +A+ + YL+ ++HRD S N ++
Sbjct: 99 KSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLV 141
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 218 AVKNVSRGSKQGK--KEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDA 275
AVK +++ S + K + EV+ + +L H N+++L D F +V E G L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 276 RLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML-----DVDVEI 329
+ +KR +I + + + Y++ + +VHRD K NI+L D D++I
Sbjct: 111 EIIKRKRFSEHDAARIIK-QVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKI 165
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ E++P GSL
Sbjct: 72 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 131
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L K + + + + YL + +HRD + NI+++
Sbjct: 132 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 179
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ E++P GSL
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L K + + + + YL + +HRD + NI+++
Sbjct: 101 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 148
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ E++P GSL
Sbjct: 48 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 107
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L K + + + + YL + +HRD + NI+++
Sbjct: 108 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 155
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ E++P GSL
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L K + + + + YL + +HRD + NI+++
Sbjct: 101 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 148
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ E++P GSL
Sbjct: 47 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 106
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L K + + + + YL + +HRD + NI+++
Sbjct: 107 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 154
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ E++P GSL
Sbjct: 40 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 99
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L K + + + + YL + +HRD + NI+++
Sbjct: 100 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 147
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKR-----PLAWAV 288
+ E+ + +L H N+V+LL H + LV+EF+ S+D + F PL
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIK 109
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
Y+ L A + + V+HRD K N++++ +
Sbjct: 110 SYLFQLLQGLAFCHSHR-----VLHRDLKPENLLINTE 142
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ E++P GSL
Sbjct: 46 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 105
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L K + + + + YL + +HRD + NI+++
Sbjct: 106 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 153
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ E++P GSL
Sbjct: 45 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 104
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L K + + + + YL + +HRD + NI+++
Sbjct: 105 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 152
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ E++P GSL
Sbjct: 39 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 98
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L K + + + + YL + +HRD + NI+++
Sbjct: 99 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 146
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ E++P GSL
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L K + + + + YL + +HRD + NI+++
Sbjct: 104 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 151
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKR-----PLAWAV 288
+ E+ + +L H N+V+LL H + LV+EF+ S+D + F PL
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKKFMDASALTGIPLPLIK 107
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
Y+ L A + + V+HRD K N++++ +
Sbjct: 108 SYLFQLLQGLAFCHSHR-----VLHRDLKPENLLINTE 140
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ E++P GSL
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L K + + + + YL + +HRD + NI+++
Sbjct: 101 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 148
>pdb|2PEL|A Chain A, Peanut Lectin
pdb|2PEL|B Chain B, Peanut Lectin
pdb|2PEL|C Chain C, Peanut Lectin
pdb|2PEL|D Chain D, Peanut Lectin
pdb|2TEP|A Chain A, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|B Chain B, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|C Chain C, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|2TEP|D Chain D, Peanut Lectin Complexed With T-antigenic Disaccharide
pdb|1CIW|A Chain A, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|B Chain B, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|C Chain C, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1CIW|D Chain D, Peanut Lectin Complexed With N-Acetyllactosamine
pdb|1QF3|A Chain A, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|B Chain B, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|C Chain C, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1QF3|D Chain D, Peanut Lectin Complexed With Methyl-Beta-Galactose
pdb|1CR7|A Chain A, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|B Chain B, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|C Chain C, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|D Chain D, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|E Chain E, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|F Chain F, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|G Chain G, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CR7|H Chain H, Peanut Lectin-Lactose Complex Monoclinic Form
pdb|1CQ9|A Chain A, Peanut Lectin-Triclinic Form
pdb|1CQ9|B Chain B, Peanut Lectin-Triclinic Form
pdb|1CQ9|C Chain C, Peanut Lectin-Triclinic Form
pdb|1CQ9|D Chain D, Peanut Lectin-Triclinic Form
pdb|1RIR|A Chain A, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|B Chain B, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|C Chain C, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIR|D Chain D, Crystal Structure Of Meso-Tetrasulphonatophenylporphyrin
In Complex With Peanut Lectin.
pdb|1RIT|A Chain A, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|B Chain B, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|C Chain C, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|1RIT|D Chain D, Crystal Structure Of Peanut Lectin In Complex With Meso-
Tetrasulphonatophenylporphyrin And Lactose
pdb|2DH1|A Chain A, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|B Chain B, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|C Chain C, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DH1|D Chain D, Crystal Structure Of Peanut Lectin
Lactose-Azobenzene-4,4'- Dicarboxylic Acid-Lactose
Complex
pdb|2DV9|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DV9|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Gal
Complex
pdb|2DVA|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVA|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,3-Galnac-
Alpha-O-Me (Methyl-T-Antigen) Complex
pdb|2DVB|A Chain A, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|B Chain B, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|C Chain C, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVB|D Chain D, Crystal Structure Of Peanut Lectin Gal-Beta-1,6-Galnac
Complex
pdb|2DVD|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVD|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,3-Gal
Complex
pdb|2DVF|A Chain A, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|B Chain B, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|C Chain C, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVF|D Chain D, Crystals Of Peanut Lectin Grown In The Presence Of Gal-
Alpha-1,3-Gal-Beta-1,4-Gal
pdb|2DVG|A Chain A, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|B Chain B, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|C Chain C, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
pdb|2DVG|D Chain D, Crystal Structure Of Peanut Lectin Gal-Alpha-1,6-Glc
Complex
Length = 236
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 36/153 (23%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNS-AGGILGLLNTTASF------ 77
+ F T FSF++ + G++FF+A QIP S GG LG+ +T +
Sbjct: 62 VASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVE 121
Query: 78 -----------SSTNHIASEDFHRQDT-------------ADVQIAYNSTTKNLSVSWTY 113
T+H+ D + D+ V + Y+S+TK LSV+ T
Sbjct: 122 FDTYSNSEYNDPPTDHVGI-DVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVT- 179
Query: 114 RLISDPRENTSLFYIIDLMKVLSQWVTIGFSAA 146
+D + T++ ++DL L + V GFSA+
Sbjct: 180 ---NDNGDITTIAQVVDLKAKLPERVKFGFSAS 209
>pdb|1BZW|A Chain A, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|B Chain B, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|C Chain C, Peanut Lectin Complexed With C-Lactose
pdb|1BZW|D Chain D, Peanut Lectin Complexed With C-Lactose
pdb|1V6I|A Chain A, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|B Chain B, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|C Chain C, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6I|D Chain D, Peanut Lectin-Lactose Complex In Acidic Ph
pdb|1V6J|A Chain A, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|B Chain B, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|C Chain C, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6J|D Chain D, Peanut Lectin-Lactose Complex Crystallized In Orthorhombic
Form At Acidic Ph
pdb|1V6K|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6K|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of
Peptide(Iwssagnva)
pdb|1V6L|A Chain A, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|B Chain B, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|C Chain C, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6L|D Chain D, Peanut Lectin-Lactose Complex In The Presence Of 9mer
Peptide (Pviwssatg)
pdb|1V6M|A Chain A, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|B Chain B, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|C Chain C, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|D Chain D, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|E Chain E, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|F Chain F, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|G Chain G, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6M|H Chain H, Peanut Lectin With 9mer Peptide (iwssagnva)
pdb|1V6N|A Chain A, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|B Chain B, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|C Chain C, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|D Chain D, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|E Chain E, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|F Chain F, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|G Chain G, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6N|H Chain H, Peanut Lectin With 9mer Peptide (Pviwssatg)
pdb|1V6O|A Chain A, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|B Chain B, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|C Chain C, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|D Chain D, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|E Chain E, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|F Chain F, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|G Chain G, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
pdb|1V6O|H Chain H, Peanut Lectin Complexed With 10mer Peptide (Pvriwssatg)
Length = 232
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 67/153 (43%), Gaps = 36/153 (23%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNS-AGGILGLLNTTASF------ 77
+ F T FSF++ + G++FF+A QIP S GG LG+ +T +
Sbjct: 62 VASFLTSFSFEMKDIKDYDPADGIIFFIAPEDTQIPAGSIGGGTLGVSDTKGAGHFVGVE 121
Query: 78 -----------SSTNHIASEDFHRQDT-------------ADVQIAYNSTTKNLSVSWTY 113
T+H+ D + D+ V + Y+S+TK LSV+ T
Sbjct: 122 FDTYSNSEYNDPPTDHVGI-DVNSVDSVKTVPWNSVSGAVVKVTVIYDSSTKTLSVAVT- 179
Query: 114 RLISDPRENTSLFYIIDLMKVLSQWVTIGFSAA 146
+D + T++ ++DL L + V GFSA+
Sbjct: 180 ---NDNGDITTIAQVVDLKAKLPERVKFGFSAS 209
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 211 IDLDMAAAVKNVSRGS--KQGKKEYV-TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEF 267
I + A+K + + + K G + V EVK QL+H ++++L D LV E
Sbjct: 33 IHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEM 92
Query: 268 MPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDV 327
NG ++ L + +P + + T +LYL+ ++HRD SN++L ++
Sbjct: 93 CHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNM 149
Query: 328 EI 329
I
Sbjct: 150 NI 151
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ E++P GSL
Sbjct: 59 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L K + + + + YL + +HRD + NI+++
Sbjct: 119 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 166
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ E++P GSL
Sbjct: 59 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L K + + + + YL + +HRD + NI+++
Sbjct: 119 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 166
>pdb|1BJQ|A Chain A, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|B Chain B, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|C Chain C, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|D Chain D, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|E Chain E, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|F Chain F, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|G Chain G, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1BJQ|H Chain H, The Dolichos Biflorus Seed Lectin In Complex With Adenine
pdb|1LU2|A Chain A, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU2|B Chain B, Dolichos Biflorus Seed Lectin In Complex With The Blood
Group A Trisaccharide
pdb|1LU1|A Chain A, The Structure Of The Dolichos Biflorus Seed Lectin In
Complex With The Forssman Disaccharide
Length = 253
Score = 41.2 bits (95), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 77/206 (37%), Gaps = 70/206 (33%)
Query: 4 LYQGDAISSVGAIELTKNNE--------------------------YLTDFSTKFSFQID 37
+ QGDA S G ++LTK E + ++T F+ +I
Sbjct: 17 ILQGDATVSSGKLQLTKVKENGIPTPSSLGRAFYSSPIQIYDKSTGAVASWATSFTVKIS 76
Query: 38 TLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSSTNHIASE----------- 86
+ ++ G+ F L VG + N GG LG+ ++ +S +A E
Sbjct: 77 APSKASFADGIAFALVPVGSEPRRN--GGYLGVFDSDVYNNSAQTVAVEFDTLSNSGWDP 134
Query: 87 --------------------DFHRQDTADVQIAYNSTTKNLSVSWTYRLISDPRENTSLF 126
D + A++ I YN+ T L S + P TS
Sbjct: 135 SMKHIGIDVNSIKSIATVSWDLANGENAEILITYNAATSLLVASLVH-----PSRRTS-- 187
Query: 127 YI----IDLMKVLSQWVTIGFSAATG 148
YI +D+ L ++V++GFSA TG
Sbjct: 188 YILSERVDITNELPEYVSVGFSATTG 213
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
AVK + GS + E+ E +T+ +L H LV+ G C +V E++ NG L
Sbjct: 35 VAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNY 93
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDV 327
L + L + + + + +L E Q +HRD + N ++D D+
Sbjct: 94 LRSHGKGLEPSQLLEMCYDVCEGMAFL--ESHQ-FIHRDLAARNCLVDRDL 141
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 5/110 (4%)
Query: 213 LDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
L +AA + +RG K K+E E+ ++QL H NL+QL + + +LV E++ G
Sbjct: 115 LKLAAKIIK-TRGMKD-KEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172
Query: 273 LDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
L R+ + L + + + ++++ + ++H D K NI+
Sbjct: 173 LFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENIL 219
>pdb|2GDF|A Chain A, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|2GDF|B Chain B, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|2GDF|C Chain C, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|2GDF|D Chain D, Crystal Structure Of Dioclea Violacea Seed Lectin
pdb|3AX4|A Chain A, Three-Dimensional Structure Of Lectin From Dioclea
Violacea And Comparative Vasorelaxant Effects With
Dioclea Rostrata
Length = 237
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNGT 155
V I+YNS K LS +Y S +T++ Y +DL VL +WV +G SA TG + T
Sbjct: 50 VHISYNSVAKRLSAVVSYSGSS----STTVSYDVDLNNVLPEWVRVGLSATTGLYKETNT 105
Query: 156 V 156
+
Sbjct: 106 I 106
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 27/97 (27%)
Query: 1 KKILYQGDAIS-SVGAIELTK-------------------------NNEYLTDFSTKFSF 34
K ++ QGDA + S G +ELTK + + F F+F
Sbjct: 138 KDLILQGDAFTDSDGNLELTKVSSSGDPQGNSVGRALFYAPVHIWEKSAVVASFDATFTF 197
Query: 35 QIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLL 71
I + R G+ FF+A IP S G +LGL
Sbjct: 198 LIKSPDREP-ADGITFFIANTDTSIPSGSGGRLLGLF 233
>pdb|3SH3|A Chain A, Crystal Structure Of A Pro-Inflammatory Lectin From The
Seeds Of Dioclea Wilsonii Standl
Length = 237
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNGT 155
V I+YNS K LS +Y S +T++ Y +DL VL +WV +G SA TG + T
Sbjct: 50 VHISYNSVAKRLSAVVSYSGSS----STTVSYDVDLNNVLPEWVRVGLSATTGLYKETNT 105
Query: 156 V 156
+
Sbjct: 106 I 106
Score = 32.0 bits (71), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 27/97 (27%)
Query: 1 KKILYQGDAIS-SVGAIELTK-------------------------NNEYLTDFSTKFSF 34
K ++ QGDA + S G +ELTK + + F F+F
Sbjct: 138 KDLILQGDAFTDSDGNLELTKVSNSGDPQGNSVGRALFYAPVHIWEKSAVVASFDATFTF 197
Query: 35 QIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLL 71
I + R G+ FF+A IP S G +LGL
Sbjct: 198 LIKSPDREP-ADGITFFIANTDTSIPSGSGGRLLGLF 233
>pdb|2JE9|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
pdb|2JE9|B Chain B, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
pdb|2JE9|C Chain C, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
pdb|2JE9|D Chain D, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
Length = 239
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNGT 155
V I+YNS K LS +Y S +T++ Y +DL VL +WV +G SA TG + T
Sbjct: 52 VHISYNSVAKRLSAVVSYSGSS----STTVSYDVDLNNVLPEWVRVGLSATTGLYKETNT 107
Query: 156 V 156
+
Sbjct: 108 I 108
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 27/97 (27%)
Query: 1 KKILYQGDAIS-SVGAIELTK-------------------------NNEYLTDFSTKFSF 34
K ++ QGDA + S G ++LTK + + F F+F
Sbjct: 140 KDLILQGDAFTDSDGNLQLTKVSSSGDPQGNSVGRALFYAPVHIWEKSAVVASFDATFTF 199
Query: 35 QIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLL 71
I + R G+ FF+A IP S G +LGL
Sbjct: 200 LIKSPDREP-ADGITFFIANTDTSIPSGSGGRLLGLF 235
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 218 AVKNVSRGSKQGK--KEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDA 275
AVK +++ S + K + EV+ + +L H N+++L D F +V E G L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 276 RLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML-----DVDVEI 329
+ +KR +I + + + Y++ + +VHRD K NI+L D D++I
Sbjct: 111 EIIKRKRFSEHDAARIIK-QVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKI 165
>pdb|2JEC|A Chain A, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
pdb|2JEC|B Chain B, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
pdb|2JEC|C Chain C, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
pdb|2JEC|D Chain D, Crystal Structure Of Recombinant Dioclea Grandiflora
Lectin Mutant E123a-H131n-K132q Complexed With
5-Bromo-4-Chloro-3- Indolyl-A-D-Mannose
Length = 239
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNGT 155
V I+YNS K LS +Y S +T++ Y +DL VL +WV +G SA TG + T
Sbjct: 52 VHISYNSVAKRLSAVVSYSGSS----STTVSYDVDLNNVLPEWVRVGLSATTGLYKETNT 107
Query: 156 V 156
+
Sbjct: 108 I 108
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 27/97 (27%)
Query: 1 KKILYQGDAIS-SVGAIELTK-------------------------NNEYLTDFSTKFSF 34
K ++ QGDA + S G ++LTK + + F F+F
Sbjct: 140 KDLILQGDAFTDSDGNLQLTKVSSSGDPQGNSVGRALFYAPVHIWEKSAVVASFDATFTF 199
Query: 35 QIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLL 71
I + R G+ FF+A IP S G +LGL
Sbjct: 200 LIKSPDREP-ADGITFFIANTDTSIPSGSGGRLLGLF 235
>pdb|1DGL|A Chain A, Lectin From Dioclea Grandiflora Complexed To Trimannoside
pdb|1DGL|B Chain B, Lectin From Dioclea Grandiflora Complexed To Trimannoside
Length = 237
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNGT 155
V I+YNS K LS +Y S +T++ Y +DL VL +WV +G SA TG + T
Sbjct: 50 VHISYNSVAKRLSAVVSYSGSS----STTVSYDVDLNNVLPEWVRVGLSATTGLYKETNT 105
Query: 156 V 156
+
Sbjct: 106 I 106
Score = 31.6 bits (70), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 27/97 (27%)
Query: 1 KKILYQGDAIS-SVGAIELTK-------------------------NNEYLTDFSTKFSF 34
K ++ QGDA + S G +ELTK + + F F+F
Sbjct: 138 KDLILQGDAFTDSDGNLELTKVSSSGDPQGNSVGRALFYAPVHIWEKSAVVASFDATFTF 197
Query: 35 QIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLL 71
I + R G+ FF+A IP S G +LGL
Sbjct: 198 LIKSPDREP-ADGITFFIANTDTSIPSGSGGRLLGLF 233
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 218 AVKNVSRGSKQGK--KEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDA 275
AVK +++ S + K + EV+ + +L H N+++L D F +V E G L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFD 110
Query: 276 RLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML-----DVDVEI 329
+ +KR +I + + + Y++ + +VHRD K NI+L D D++I
Sbjct: 111 EIIKRKRFSEHDAARIIK-QVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKI 165
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKR-----PLAWAV 288
+ E+ + +L H N+V+LL H + LV+EF+ S+D + F PL
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIK 109
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
Y+ L A + + V+HRD K N++++ +
Sbjct: 110 SYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTE 142
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 7/92 (7%)
Query: 235 TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGK--KRPLAWAVRYMI 292
E+ ++QL H L+ L D+ E +L+ EF+ G L R+ + K A + YM
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMR 156
Query: 293 SLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L +++ E +VH D K NIM +
Sbjct: 157 Q--ACEGLKHMH---EHSIVHLDIKPENIMCE 183
>pdb|2ZBJ|A Chain A, Crystal Structure Of Dioclea Rostrata Lectin
Length = 237
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNGT 155
V I+YNS K LS +Y S +T++ Y +DL VL +WV +G SA TG + T
Sbjct: 50 VHISYNSVAKRLSAVVSYTGSS----STTVSYDVDLNNVLPEWVRVGLSATTGLYKETNT 105
Query: 156 V 156
+
Sbjct: 106 I 106
Score = 30.8 bits (68), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 27/97 (27%)
Query: 1 KKILYQGDAIS-SVGAIELTK-------------------------NNEYLTDFSTKFSF 34
K ++ QGDA + S G +ELTK + + F F+F
Sbjct: 138 KDLILQGDATTDSDGNLELTKVSSSGDPQGNSVGRALFYAPVHIWEKSAVVASFDATFTF 197
Query: 35 QIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLL 71
I + R G+ FF+A IP S G +LGL
Sbjct: 198 LIKSPDRDP-ADGITFFIANPDTSIPSGSGGRLLGLF 233
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 192 YRDLAS-ATSNFPENKMGYLIDLDMAAAVKNVSRG--SKQGKKEYVTEVKTISQLRHRNL 248
YR L + NF + K+ I AVK + + + ++ EV+ + L H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 249 VQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWE 308
V+L LV E+ G + L R R + +A+ Y ++++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF- 133
Query: 309 QCVVHRDTKSSNIMLDVDVEI 329
+VHRD K+ N++LD D+ I
Sbjct: 134 --IVHRDLKAENLLLDADMNI 152
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 13/98 (13%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKR-----PLAWAV 288
+ E+ + +L H N+V+LL H + LV+EF+ S+D + F PL
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL---SMDLKDFMDASALTGIPLPLIK 108
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
Y+ L A + + V+HRD K N++++ +
Sbjct: 109 SYLFQLLQGLAFCHSHR-----VLHRDLKPQNLLINTE 141
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 192 YRDLAS-ATSNFPENKMGYLIDLDMAAAVKNVSRG--SKQGKKEYVTEVKTISQLRHRNL 248
YR L + NF + K+ I AVK + + + ++ EV+ + L H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 249 VQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWE 308
V+L LV E+ G + L R R + +A+ Y ++++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF- 133
Query: 309 QCVVHRDTKSSNIMLDVDVEI 329
+VHRD K+ N++LD D+ I
Sbjct: 134 --IVHRDLKAENLLLDADMNI 152
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 7/141 (4%)
Query: 192 YRDLAS-ATSNFPENKMGYLIDLDMAAAVKNVSRG--SKQGKKEYVTEVKTISQLRHRNL 248
YR L + NF + K+ I AVK + + + ++ EV+ + L H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 75
Query: 249 VQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWE 308
V+L LV E+ G + L R R + +A+ Y ++++
Sbjct: 76 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-QIVSAVQYCHQKF- 133
Query: 309 QCVVHRDTKSSNIMLDVDVEI 329
+VHRD K+ N++LD D+ I
Sbjct: 134 --IVHRDLKAENLLLDADMNI 152
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 212 DLDMAAAVKNVSRGSKQGKKE-YVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMP 269
D + AVK + + +KE ++E+K +S L +H N+V LLG C G L++ E+
Sbjct: 74 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 270 NGSLDARLFGKKRPLAWAVRYMISLGLATA--LLYLYEEWEQCV--------VHRDTKSS 319
G L L K R L + I+ A+ LL+ + Q + +HRD +
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAAR 193
Query: 320 NIML 323
N++L
Sbjct: 194 NVLL 197
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRG--EFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMIS 293
E++ + L H N+V+ G C + G L+ EF+P+GSL L K + + +
Sbjct: 73 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 132
Query: 294 LGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + + YL + VHRD + N++++ + ++
Sbjct: 133 VQICKGMDYL---GSRQYVHRDLAARNVLVESEHQV 165
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLG 295
EV+ + L H N+V+L LV E+ G + L R R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-Q 121
Query: 296 LATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +A+ Y ++++ +VHRD K+ N++LD D+ I
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNI 152
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD----ARLFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ D + L G PL +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYL 109
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 110 FQLLQGLAFC-------HSHRVLHRDLKPENLLINTE 139
>pdb|1HQL|A Chain A, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
pdb|1HQL|B Chain B, The Xenograft Antigen In Complex With The B4 Isolectin Of
Griffonia Simplicifolia Lectin-1
Length = 257
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 70/210 (33%)
Query: 3 ILYQGDAISSVGAIELTKNNEY--------------------------LTDFSTKFSFQI 36
I++QGDA ++ G ++L K N+Y + F T+F+F +
Sbjct: 20 IIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFFL 79
Query: 37 DTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLN-TTASFSSTNHIASEDF------- 88
G GL FFLA + AG LGL N +TA+ S N + + +F
Sbjct: 80 KITGNGP-ADGLAFFLAPPDSDV--KDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPN 136
Query: 89 ---------------------HRQDTADV--------QIAYNSTTKNLSVSWTYRLISDP 119
R + +D+ +I+Y+ + + L+V +Y SD
Sbjct: 137 FPEPSYRHIGINVNSIVSVATKRWEDSDIFSGKIATARISYDGSAEILTVVLSYPDGSD- 195
Query: 120 RENTSLFYIIDLMKVLSQWVTIGFSAATGH 149
L + +D+ + L + V +G SA+TG+
Sbjct: 196 ---YILSHSVDMRQNLPESVRVGISASTGN 222
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLG 295
EV+ + L H N+V+L LV E+ G + L R R
Sbjct: 63 EVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-Q 121
Query: 296 LATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +A+ Y ++++ +VHRD K+ N++LD D+ I
Sbjct: 122 IVSAVQYCHQKF---IVHRDLKAENLLLDADMNI 152
>pdb|1GNZ|A Chain A, Lectin I-B4 From Griffonia Simplicifolia (Gs I-B4)metal
Free Form
Length = 257
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 85/210 (40%), Gaps = 70/210 (33%)
Query: 3 ILYQGDAISSVGAIELTKNNEY--------------------------LTDFSTKFSFQI 36
I++QGDA ++ G ++L K N+Y + F T+F+F +
Sbjct: 20 IIFQGDANTTAGTLQLCKTNQYGTPLQWSAGRALYSDPVQLWDNKTESVASFYTEFTFFL 79
Query: 37 DTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLN-TTASFSSTNHIASEDF------- 88
G GL FFLA + AG LGL N +TA+ S N + + +F
Sbjct: 80 KITGNGP-ADGLAFFLAPPDSDV--KDAGEYLGLFNKSTATQPSKNQVVAVEFDTWTNPN 136
Query: 89 ---------------------HRQDTADV--------QIAYNSTTKNLSVSWTYRLISDP 119
R + +D+ +I+Y+ + + L+V +Y SD
Sbjct: 137 FPEPSYRHIGINVNSIVSVATKRWEDSDIFSGKIATARISYDGSAEILTVVLSYPDGSD- 195
Query: 120 RENTSLFYIIDLMKVLSQWVTIGFSAATGH 149
L + +D+ + L + V +G SA+TG+
Sbjct: 196 ---YILSHSVDMRQNLPESVRVGISASTGN 222
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRG--EFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMIS 293
E++ + L H N+V+ G C + G L+ EF+P+GSL L K + + +
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 120
Query: 294 LGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + + YL + VHRD + N++++ + ++
Sbjct: 121 VQICKGMDYL---GSRQYVHRDLAARNVLVESEHQV 153
>pdb|1N3O|A Chain A, Pterocarcpus Angolensis Lectin In Complex With
Alpha-Methyl Glucose
pdb|1N3O|B Chain B, Pterocarcpus Angolensis Lectin In Complex With
Alpha-Methyl Glucose
pdb|1N3P|A Chain A, Pterocarpus Angolensis Lectin In Complex With Sucrose
pdb|1N3P|B Chain B, Pterocarpus Angolensis Lectin In Complex With Sucrose
pdb|1N3Q|A Chain A, Pterocarpus Angolensis Lectin Complexed With Turanose
pdb|1N3Q|B Chain B, Pterocarpus Angolensis Lectin Complexed With Turanose
pdb|1S1A|A Chain A, Pterocarpus Angolensis Seed Lectin (Pal) With One Binding
Site Free And One Binding Site Containing The
Disaccharide Man(A1-3)manme
pdb|1S1A|B Chain B, Pterocarpus Angolensis Seed Lectin (Pal) With One Binding
Site Free And One Binding Site Containing The
Disaccharide Man(A1-3)manme
pdb|2AR6|A Chain A, Pterocarpus Angolensis Lectin (pal) In Complex With The
Pentasaccharide M592
pdb|2AR6|B Chain B, Pterocarpus Angolensis Lectin (pal) In Complex With The
Pentasaccharide M592
pdb|2ARB|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Glcnac(Beta1- 2)man Disaccharide
pdb|2ARB|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Glcnac(Beta1- 2)man Disaccharide
pdb|2ARE|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With
D-Mannose (Anomeric Mixture)
pdb|2ARE|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With
D-Mannose (Anomeric Mixture)
pdb|2ARX|A Chain A, Pterocarpus Angolensis Seed Lectin In Complex With The
Decasaccharide Na2f
pdb|2ARX|B Chain B, Pterocarpus Angolensis Seed Lectin In Complex With The
Decasaccharide Na2f
Length = 252
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 71/213 (33%)
Query: 1 KKILYQGDAISSVGAIELTKNNE--------------------------YLTDFSTKFSF 34
K +++QGDA A++LTK + + +F ++FSF
Sbjct: 16 KNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEKSSSRVANFQSQFSF 75
Query: 35 QIDTLGRP--TYGHGLVFFLATVGLQIPLNSAGGILGLLNT-TASFSSTNHIAS---EDF 88
+L P G+ FF+A IP S GG+LGL TA +S N + + + F
Sbjct: 76 ---SLKSPLSNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSANQVIAVEFDTF 132
Query: 89 HRQDTA--------------------------------DVQIAYNSTTKNLSVSWTYRLI 116
+ QD+ +V + +N +T+NL V TY
Sbjct: 133 YAQDSNTWDPNYPHIGIDVNSIRSVKTVKWDRRDGQSLNVLVTFNPSTRNLDVVATY--- 189
Query: 117 SDPRENTSLFYIIDLMKVLSQWVTIGFSAATGH 149
SD + Y +D+ VL +WV +GFSAA+G
Sbjct: 190 SD-GTRYEVSYEVDVRSVLPEWVRVGFSAASGE 221
>pdb|1Q8O|A Chain A, Pterocartpus Angolensis Lectin Pal In Complex With The
Dimmanoside Man(Alpha1-2)man
pdb|1Q8O|B Chain B, Pterocartpus Angolensis Lectin Pal In Complex With The
Dimmanoside Man(Alpha1-2)man
pdb|1Q8P|A Chain A, Pterocarpus Angolensis Lectin Pal In Complex With The
Dimannoside Man(Alpha1-3)man
pdb|1Q8P|B Chain B, Pterocarpus Angolensis Lectin Pal In Complex With The
Dimannoside Man(Alpha1-3)man
pdb|1Q8Q|A Chain A, Pterocarpus Angolensis Lectin (pal) In Complex With The
Dimannoside Man(alpha1-4)man
pdb|1Q8Q|B Chain B, Pterocarpus Angolensis Lectin (pal) In Complex With The
Dimannoside Man(alpha1-4)man
pdb|1Q8S|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Dimannoside Man(Alpha1-6)man
pdb|1Q8S|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Dimannoside Man(Alpha1-6)man
pdb|1Q8V|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Trimannoside [man(Alpha1-3)]man(Alpha1-6)man
pdb|1Q8V|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With The
Trimannoside [man(Alpha1-3)]man(Alpha1-6)man
pdb|1UKG|A Chain A, Pterocarps Angolensis Lectin Pal In Complex With Methyl-
Alpha-Mannose
pdb|1UKG|B Chain B, Pterocarps Angolensis Lectin Pal In Complex With Methyl-
Alpha-Mannose
pdb|2GME|A Chain A, Metal-Free (Apo) P. Angolensis Seed Lectin
pdb|2GME|B Chain B, Metal-Free (Apo) P. Angolensis Seed Lectin
pdb|2GMM|A Chain A, Metal-Free (Apo) P. Angolensis Seed Lectin In Complex With
Man-Alpha(1-2)man
pdb|2GMM|B Chain B, Metal-Free (Apo) P. Angolensis Seed Lectin In Complex With
Man-Alpha(1-2)man
pdb|2GMP|A Chain A, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Glcnac- Beta(1-2)man
pdb|2GMP|B Chain B, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Glcnac- Beta(1-2)man
pdb|2GN3|A Chain A, Metal-Free (Apo-Pal) In Complex With Alpha-D-Met-Man
pdb|2GN3|B Chain B, Metal-Free (Apo-Pal) In Complex With Alpha-D-Met-Man
pdb|2GN7|A Chain A, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Man-alpha(1-3)man-alpha(1-6)man
pdb|2GN7|B Chain B, Metal-free (apo) P. Angolensis Seed Lectin In Complex With
Man-alpha(1-3)man-alpha(1-6)man
pdb|2GNB|A Chain A, Edta-Treated (2 Weeks) P. Angolensis Lectin
pdb|2GNB|B Chain B, Edta-Treated (2 Weeks) P. Angolensis Lectin
pdb|2GND|A Chain A, One Hour Edta Treatment, P. Angolensis Lectin
pdb|2GND|B Chain B, One Hour Edta Treatment, P. Angolensis Lectin
pdb|2GNM|A Chain A, P. Angolensis Lectin (Pal) Treated With Edta For 39 Hours
pdb|2GNM|B Chain B, P. Angolensis Lectin (Pal) Treated With Edta For 39 Hours
pdb|2GNT|A Chain A, Edta Treated P. Angolensis Lectin (Pal) Remetallized With
Calcium (1 Hour Treatment)
pdb|2GNT|B Chain B, Edta Treated P. Angolensis Lectin (Pal) Remetallized With
Calcium (1 Hour Treatment)
pdb|2AUY|A Chain A, Pterocarpus Angolensis Lectin In Complex With The
Trisaccharide Glcnac(b1-2)man(a1-3)man
pdb|2AUY|B Chain B, Pterocarpus Angolensis Lectin In Complex With The
Trisaccharide Glcnac(b1-2)man(a1-3)man
pdb|2PHF|A Chain A, Pterocarpus Angolensis Lectin Complexed With Man-6
pdb|2PHF|B Chain B, Pterocarpus Angolensis Lectin Complexed With Man-6
pdb|2PHR|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With
Man-7d1
pdb|2PHR|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With
Man-7d1
pdb|2PHT|A Chain A, Pterocarpus Angolensis Lectin (P L) In Complex With
Man-7d3
pdb|2PHT|B Chain B, Pterocarpus Angolensis Lectin (P L) In Complex With
Man-7d3
pdb|2PHU|A Chain A, Pterocarpus Angolensis Lectin In Complex With Man-8d1d3
pdb|2PHU|B Chain B, Pterocarpus Angolensis Lectin In Complex With Man-8d1d3
pdb|2PHW|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-9
pdb|2PHW|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-9
pdb|2PHX|A Chain A, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-5
pdb|2PHX|B Chain B, Pterocarpus Angolensis Lectin (Pal) In Complex With Man-5
Length = 252
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 87/213 (40%), Gaps = 71/213 (33%)
Query: 1 KKILYQGDAISSVGAIELTKNNE--------------------------YLTDFSTKFSF 34
K +++QGDA A++LTK + + +F ++FSF
Sbjct: 16 KNLIFQGDAQIKNNAVQLTKTDSNGNPVASTVGRILFSAQVHLWEKSSSRVANFQSQFSF 75
Query: 35 QIDTLGRP--TYGHGLVFFLATVGLQIPLNSAGGILGLLNT-TASFSSTNHIAS---EDF 88
+L P G+ FF+A IP S GG+LGL TA +S N + + + F
Sbjct: 76 ---SLKSPLSNGADGIAFFIAPPDTTIPSGSGGGLLGLFAPGTAQNTSANQVIAVEFDTF 132
Query: 89 HRQDTA--------------------------------DVQIAYNSTTKNLSVSWTYRLI 116
+ QD+ +V + +N +T+NL V TY
Sbjct: 133 YAQDSNTWDPNYPHIGIDVNSIRSVKTVKWDRRDGQSLNVLVTFNPSTRNLDVVATY--- 189
Query: 117 SDPRENTSLFYIIDLMKVLSQWVTIGFSAATGH 149
SD + Y +D+ VL +WV +GFSAA+G
Sbjct: 190 SD-GTRYEVSYEVDVRSVLPEWVRVGFSAASGE 221
>pdb|1DHK|B Chain B, Structure Of Porcine Pancreatic Alpha-Amylase
Length = 223
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 39/178 (21%)
Query: 2 KILYQGDA-ISSVGAIELTKNN--------------------EYLTDFSTKFSFQIDTLG 40
++ QGDA +SS G ++L+ N+ + F T F+ I T
Sbjct: 15 NLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTMNIRTHR 74
Query: 41 RPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSS----TNHIASE--DFHRQD-- 92
+ GL F L V P + + +T S S N I S D H D
Sbjct: 75 QANSAVGLDFVLVPVQ---PESKGDTVTVEFDTFLSRISIDVNNNDIKSVPWDVHDYDGQ 131
Query: 93 TADVQIAYNSTTKNLSVSWTYRLISDPR--ENTSLFYIIDLMKVLSQWVTIGFSAATG 148
A+V+I YNS+TK SVS +S+P ++ ++ ++L K + WV++GFSA +G
Sbjct: 132 NAEVRITYNSSTKVFSVS-----LSNPSTGKSNNVSTTVELEKEVYDWVSVGFSATSG 184
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 15/145 (10%)
Query: 192 YRDLAS-ATSNFPENKMGYLIDLDMAAAVKNVSRG--SKQGKKEYVTEVKTISQLRHRNL 248
YR L + NF + K+ I AVK + + + ++ EV+ + L H N+
Sbjct: 9 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNI 68
Query: 249 VQLLGCCHDRGEFLLVYEFMPNGS----LDARLFGKKRPLAWAVRYMISLGLATALLYLY 304
V+L LV E+ G L A + K++ R ++S A+ Y +
Sbjct: 69 VKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVS-----AVQYCH 123
Query: 305 EEWEQCVVHRDTKSSNIMLDVDVEI 329
+++ +VHRD K+ N++LD D+ I
Sbjct: 124 QKF---IVHRDLKAENLLLDADMNI 145
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ E++P GSL
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L + + + + YL + +HRD + NI+++
Sbjct: 104 RDYLQAHAERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVE 151
>pdb|2JE7|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin
S131h Complexed With
5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
Length = 239
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNGT 155
I+YNS K LS +Y S +T++ Y +DL VL +WV +G SA TG + T
Sbjct: 52 AHISYNSVAKRLSAVVSYSGTS----STTVSYDVDLNNVLPEWVRVGLSATTGLYKETNT 107
Query: 156 V 156
+
Sbjct: 108 I 108
Score = 30.0 bits (66), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Query: 11 SSVG------AIELTKNNEYLTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSA 64
SSVG + + + + + F F+F I + R G+ FF+A IP S
Sbjct: 170 SSVGRALFYAPVHIWEKSAVVASFDATFTFLIKSPDRDP-ADGITFFIANTDTSIPSGSG 228
Query: 65 GGILGLL 71
G +LGL
Sbjct: 229 GRLLGLF 235
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 231 KEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRY 290
+E E+ + L H N+++L D+ F LV EF G L ++ + +
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK-FDECDAA 149
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
I + + + YL++ +VHRD K NI+L+
Sbjct: 150 NIMKQILSGICYLHK---HNIVHRDIKPENILLE 180
>pdb|2JDZ|A Chain A, Crystal Structure Of Recombinant Dioclea Guianensis Lectin
Complexed With 5-Bromo-4-Chloro-3-Indolyl-A-D-Mannose
Length = 239
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNGT 155
I+YNS K LS +Y S +T++ Y +DL VL +WV +G SA TG + T
Sbjct: 52 AHISYNSVAKRLSAVVSYSGTS----STTVSYDVDLNNVLPEWVRVGLSATTGLYKETNT 107
Query: 156 V 156
+
Sbjct: 108 I 108
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 16 IELTKNNEYLTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLL 71
+ + + + + F F+F I + R G+ FF+A IP S G +LGL
Sbjct: 181 VHIWEKSAVVASFDATFTFLIKSPDRDP-ADGITFFIANTDTSIPSGSGGRLLGLF 235
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 216 AAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSL 273
AVK + +++ +++ E++ + L+H N+V+ G C+ G L+ E++P GSL
Sbjct: 42 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 101
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L K + + + + YL + +HR+ + NI+++
Sbjct: 102 RDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKRYIHRNLATRNILVE 149
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 4/94 (4%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLG 295
EV+ + L H N+V+L LV E+ G + L R R
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-Q 122
Query: 296 LATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +A+ Y ++++ +VHRD K+ N++LD D+ I
Sbjct: 123 IVSAVQYCHQKY---IVHRDLKAENLLLDGDMNI 153
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 7/141 (4%)
Query: 192 YRDLAS-ATSNFPENKMGYLIDLDMAAAVKNVSRG--SKQGKKEYVTEVKTISQLRHRNL 248
YR L + NF + K+ I AVK + + + ++ EV+ L H N+
Sbjct: 16 YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNI 75
Query: 249 VQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWE 308
V+L LV E+ G + L R R + +A+ Y ++++
Sbjct: 76 VKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-QIVSAVQYCHQKF- 133
Query: 309 QCVVHRDTKSSNIMLDVDVEI 329
+VHRD K+ N++LD D I
Sbjct: 134 --IVHRDLKAENLLLDADXNI 152
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 212 DLDMAAAVKNVSRGSKQGKKE-YVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMP 269
D + AVK + + +KE ++E+K +S L +H N+V LLG C G L++ E+
Sbjct: 66 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 125
Query: 270 NGSLDARLFGKK---------RPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSN 320
G L L K RPL S +A + +L + C +HRD + N
Sbjct: 126 YGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLAS--KNC-IHRDVAARN 182
Query: 321 IML 323
++L
Sbjct: 183 VLL 185
>pdb|1AX0|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Actylgalactosamine
pdb|1AX1|A Chain A, Erythrina Corallodendron Lectin In Complex With Lactose
pdb|1AX2|A Chain A, Erythrina Corallodendron Lectin In Complex With
N-Acetyllactosamine
pdb|1AXY|A Chain A, Erythrina Corallodendron Lectin
pdb|1AXZ|A Chain A, Erythrina Corallodendron Lectin In Complex With
D-Galactose
Length = 239
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 65/162 (40%), Gaps = 41/162 (25%)
Query: 25 LTDFSTKFSFQID-TLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTA-------- 75
+ F T+FSF I+ RP GLVFF+ + G LG+ N +
Sbjct: 67 VASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSK--PAQGYGYLGIFNNSKQDNSYQTL 124
Query: 76 -----SFS----------------STNHIASEDFHRQD--TADVQIAYNSTTKNLSVSWT 112
+FS S I ++ F + A+V I Y++++K L
Sbjct: 125 GVEFDTFSNPWDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVIKYDASSKILHAVLV 184
Query: 113 YRLISDPRENT--SLFYIIDLMKVLSQWVTIGFSAATGHCSD 152
Y P ++ I+D+ +VL +WV +G S ATG D
Sbjct: 185 Y-----PSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRD 221
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 110 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 139
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 57 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 117 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 146
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 17/129 (13%)
Query: 213 LDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRG-----EFLLVYEF 267
L +A + S++ +E+++E + H N+++LLG C + + +++ F
Sbjct: 63 LKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPF 122
Query: 268 MPNGSLDARLF-------GKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSN 320
M G L L K PL +++M+ + L L + +HRD + N
Sbjct: 123 MKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS-----NRNFLHRDLAARN 177
Query: 321 IMLDVDVEI 329
ML D+ +
Sbjct: 178 CMLRDDMTV 186
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 14/123 (11%)
Query: 212 DLDMAAAVKNVSRGSKQGKKE-YVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMP 269
D + AVK + + +KE ++E+K +S L +H N+V LLG C G L++ E+
Sbjct: 74 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 270 NGSLDARLFGKK---------RPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSN 320
G L L K RPL S +A + +L + C +HRD + N
Sbjct: 134 YGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLAS--KNC-IHRDVAARN 190
Query: 321 IML 323
++L
Sbjct: 191 VLL 193
>pdb|1CN1|A Chain A, Crystal Structure Of Demetallized Concanavalin A. The
Metal- Binding Region
pdb|1CN1|B Chain B, Crystal Structure Of Demetallized Concanavalin A. The
Metal- Binding Region
pdb|3CNA|A Chain A, Structure Of Concanavalin A At 2.4 Angstroms Resolution
Length = 237
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPREN-TSLFYIIDLMKVLSQWVTIGFSAATGHCSDNG 154
I YNS K LS ++S P + TS+ Y +DL VL +WV +G SA+TG +
Sbjct: 50 AHIIYNSVDKRLSA-----VVSYPNADATSVSYDVDLNDVLPEWVRVGLSASTGLYKETN 104
Query: 155 TV 156
T+
Sbjct: 105 TI 106
>pdb|2CNA|A Chain A, The Covalent And Three-Dimensional Structure Of
Concanavalin A, Iv.Atomic Coordinates,Hydrogen
Bonding,And Quaternary Structure
Length = 237
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPREN-TSLFYIIDLMKVLSQWVTIGFSAATGHCSDNG 154
I YNS K LS ++S P + TS+ Y +DL VL +WV +G SA+TG +
Sbjct: 50 AHIIYNSVDKRLSA-----VVSYPNADATSVSYDVDLNDVLPEWVRVGLSASTGLYKETN 104
Query: 155 TV 156
T+
Sbjct: 105 TI 106
>pdb|1VIW|B Chain B, Tenebrio Molitor Alpha-Amylase-Inhibitor Complex
Length = 205
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 79/178 (44%), Gaps = 39/178 (21%)
Query: 2 KILYQGDA-ISSVGAIELTKNN--------------------EYLTDFSTKFSFQIDTLG 40
++ QGDA +SS G ++L+ N+ + F T F+ I T
Sbjct: 15 NLILQGDATVSSNGNLQLSYNSYDSMSRAFYSAPIQIRDSTTGNVASFDTNFTMNIRTHR 74
Query: 41 RPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSS----TNHIASE--DFHRQD-- 92
+ GL F L V P + + +T S S N I S D H D
Sbjct: 75 QANSAVGLDFVLVPVQ---PESKGDTVTVEFDTFLSRISIDVNNNDIKSVPWDVHDYDGQ 131
Query: 93 TADVQIAYNSTTKNLSVSWTYRLISDPR--ENTSLFYIIDLMKVLSQWVTIGFSAATG 148
A+V+I YNS+TK SVS +S+P ++ ++ ++L K + WV++GFSA +G
Sbjct: 132 NAEVRITYNSSTKVFSVS-----LSNPSTGKSNNVSTTVELEKEVYDWVSVGFSATSG 184
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 109 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 138
>pdb|1SFY|A Chain A, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|B Chain B, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|C Chain C, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|D Chain D, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|E Chain E, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
pdb|1SFY|F Chain F, Crystal Structure Of Recombinant Erythrina Corallodandron
Lectin
Length = 239
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 65/162 (40%), Gaps = 41/162 (25%)
Query: 25 LTDFSTKFSFQID-TLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTA-------- 75
+ F T+FSF I+ RP GLVFF+ + G LG+ N +
Sbjct: 67 VASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSK--PAQGYGYLGIFNNSKQDNSYQTL 124
Query: 76 -----SFS----------------STNHIASEDFHRQD--TADVQIAYNSTTKNLSVSWT 112
+FS S I ++ F + A+V I Y++++K L
Sbjct: 125 GVEFDTFSNQWDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVIKYDASSKLLHAVLV 184
Query: 113 YRLISDPRENT--SLFYIIDLMKVLSQWVTIGFSAATGHCSD 152
Y P ++ I+D+ +VL +WV +G S ATG D
Sbjct: 185 Y-----PSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRD 221
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 110 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 139
>pdb|1GZ9|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With 2'-Alpha-L-Fucosyllactose
pdb|1GZC|A Chain A, High-Resolution Crystal Structure Of Erythrina Cristagalli
Lectin In Complex With Lactose
Length = 239
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 64/162 (39%), Gaps = 41/162 (25%)
Query: 25 LTDFSTKFSFQID-TLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTA-------- 75
+ F T+FSF I+ RP GLVFF+ + G LG+ N +
Sbjct: 67 VASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSK--PAQGYGYLGVFNNSKQDNSYQTL 124
Query: 76 -----SFS----------------STNHIASEDFHRQD--TADVQIAYNSTTKNLSVSWT 112
+FS S I ++ F + A+V I Y++ +K L V
Sbjct: 125 AVEFDTFSNPWDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVIKYDAPSKILHVVLV 184
Query: 113 YRLISDPRENT--SLFYIIDLMKVLSQWVTIGFSAATGHCSD 152
Y P ++ I+D+ +VL WV +G S ATG D
Sbjct: 185 Y-----PSSGAIYTIAEIVDVKQVLPDWVDVGLSGATGAQRD 221
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 109 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 138
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 110 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 139
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 110 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 139
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 111 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 140
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 57 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 116
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 117 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 146
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 110 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 139
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 109 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 138
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 110 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 139
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 112 FQLLQGLAFC-------HSHRVLHRDLKPENLLINTE 141
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 111 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 140
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS---LDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYL 112
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 113 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 142
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 110 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 139
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 111 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 140
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 235 TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISL 294
TE++ + LRH+++ QL + +V E+ P G L + + R L+ ++
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR-LSEEETRVVFR 115
Query: 295 GLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ +A+ Y++ Q HRD K N++ D
Sbjct: 116 QIVSAVAYVH---SQGYAHRDLKPENLLFD 142
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 109 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 138
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 219 VKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLF 278
+K + + + + + +S+L H++LV G C E +LV EF+ GSLD L
Sbjct: 45 LKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLK 104
Query: 279 GKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
K + + ++ LA A+ +L E ++H + + NI+L
Sbjct: 105 KNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILL 146
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 110 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 139
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 108
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 109 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 138
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 113
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 114 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 143
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 112
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 113 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 142
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 112 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 141
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 112
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 113 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 142
>pdb|1LTE|A Chain A, Structure Of A Legume Lectin With An Ordered N-Linked
Carbohydrate In Complex With Lactose
Length = 239
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 65/162 (40%), Gaps = 41/162 (25%)
Query: 25 LTDFSTKFSFQID-TLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTA-------- 75
+ F T+FSF I+ RP GLVFF+ + G LG+ N +
Sbjct: 67 VASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSK--PAQGYGYLGIFNQSKQDNSYQTL 124
Query: 76 -----SFS----------------STNHIASEDFHRQD--TADVQIAYNSTTKNLSVSWT 112
+FS S I ++ F + A+V I Y++++K L
Sbjct: 125 GVEFDTFSNPWDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVIKYDASSKLLHAVLV 184
Query: 113 YRLISDPRENT--SLFYIIDLMKVLSQWVTIGFSAATGHCSD 152
Y P ++ I+D+ +VL +WV +G S ATG D
Sbjct: 185 Y-----PSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRD 221
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 52 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 112 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 141
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 51 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 111 FQLLQGLAFC-------HSHRVLHRDLKPENLLINTE 140
>pdb|1FYU|A Chain A, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
pdb|1FYU|B Chain B, Crystal Structure Of Erythrina Corallodendron Lectin In
Hexagonal Crystal Form
Length = 255
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 65/162 (40%), Gaps = 41/162 (25%)
Query: 25 LTDFSTKFSFQID-TLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTA-------- 75
+ F T+FSF I+ RP GLVFF+ + G LG+ N +
Sbjct: 67 VASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSK--PAQGYGYLGIFNNSKQDNSYQTL 124
Query: 76 -----SFS----------------STNHIASEDFHRQD--TADVQIAYNSTTKNLSVSWT 112
+FS S I ++ F + A+V I Y++++K L
Sbjct: 125 GVEFDTFSNPWDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVIKYDASSKILHAVLV 184
Query: 113 YRLISDPRENT--SLFYIIDLMKVLSQWVTIGFSAATGHCSD 152
Y P ++ I+D+ +VL +WV +G S ATG D
Sbjct: 185 Y-----PSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRD 221
>pdb|1H9W|A Chain A, Native Dioclea Guianensis Seed Lectin
pdb|1H9W|B Chain B, Native Dioclea Guianensis Seed Lectin
Length = 237
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNGT 155
I+YNS K LS +Y S +T++ Y +DL VL +WV +G SA TG + T
Sbjct: 50 AHISYNSVAKRLSAVVSYTGSS----STTVSYDVDLNNVLPEWVRVGLSATTGLYKETNT 105
Query: 156 V 156
+
Sbjct: 106 I 106
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 27/97 (27%)
Query: 1 KKILYQGDAIS-SVGAIELTK-------------------------NNEYLTDFSTKFSF 34
K ++ QGDA + S G +ELTK + + F F+F
Sbjct: 138 KDLILQGDATTDSDGNLELTKVSSSGDPQGSSVGRALFYAPVHIWEKSAVVASFDATFTF 197
Query: 35 QIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLL 71
I + R G+ FF+A IP S G +LGL
Sbjct: 198 LIKSPDRDP-ADGITFFIANTDTSIPSGSGGRLLGLF 233
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 3/105 (2%)
Query: 219 VKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLF 278
+K + + + + + +S+L H++LV G C E +LV EF+ GSLD L
Sbjct: 45 LKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLK 104
Query: 279 GKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
K + + ++ LA A+ +L E ++H + + NI+L
Sbjct: 105 KNKNCINILWKLEVAKQLAWAMHFLE---ENTLIHGNVCAKNILL 146
>pdb|1H9P|A Chain A, Crystal Structure Of Dioclea Guianensis Seed Lectin
Length = 237
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNGT 155
I+YNS K LS +Y S +T++ Y +DL VL +WV +G SA TG + T
Sbjct: 50 AHISYNSVAKRLSAVVSYTGSS----STTVSYDVDLNNVLPEWVRVGLSATTGLYKETNT 105
Query: 156 V 156
+
Sbjct: 106 I 106
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 8/77 (10%)
Query: 2 KILYQGDAI-SSVG------AIELTKNNEYLTDFSTKFSFQIDTLGRPTYGHGLVFFLAT 54
K+ GD SSVG + + + + + F F+F I + R G+ FF+A
Sbjct: 158 KVSSSGDPQGSSVGRALFYAPVHIWEKSAVVASFDATFTFLIKSPDRDP-ADGITFFIAN 216
Query: 55 VGLQIPLNSAGGILGLL 71
IP S G +LGL
Sbjct: 217 TDTSIPSGSGGRLLGLF 233
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 54 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 113
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 114 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 143
>pdb|1FAY|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|C Chain C, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|D Chain D, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|E Chain E, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|F Chain F, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|G Chain G, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1FAY|H Chain H, Winged Bean Acidic Lectin Complexed With
Methyl-Alpha-D-Galactose (Monoclinic Form)
pdb|1F9K|A Chain A, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
pdb|1F9K|B Chain B, Winged Bean Acidic Lectin Complexed With
Methyl-alpha-d-galactose
Length = 238
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 64/155 (41%), Gaps = 35/155 (22%)
Query: 25 LTDFSTKFSFQI-DTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTA-------- 75
+ F T+FSF I P GL FF+ V P GG LG+
Sbjct: 66 VASFETRFSFNITQPYAYPEPADGLTFFM--VPPNSPQGEDGGNLGVFKPPEGDNAFAVE 123
Query: 76 --SFSST-----NHI--------ASEDFHRQ----DTADVQIAYNSTTKNLSVSWTYRLI 116
+F +T HI +S+ H Q A+V I Y+S TK L+V + +
Sbjct: 124 FDTFQNTWDPQVPHIGIDVNSIVSSKTLHFQLENGGVANVVIKYDSPTKILNVVLAFHSV 183
Query: 117 SDPRENTSLFYIIDLMKVL--SQWVTIGFSAATGH 149
+L I+DL + S+WV +G SA TG+
Sbjct: 184 GTVY---TLSNIVDLKQEFPNSEWVNVGLSATTGY 215
>pdb|3RRD|A Chain A, Native Structure Of Dioclea Virgata Lectin
pdb|3RS6|A Chain A, Crystal Structure Dioclea Virgata Lectin In Complexed With
X-Mannose
Length = 237
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNGT 155
I+YNS K LS +Y S +T++ Y +DL VL +WV +G SA TG + T
Sbjct: 50 AHISYNSVAKRLSAVVSYTGSS----STTVSYDVDLNNVLPEWVRVGLSATTGLYKETNT 105
Query: 156 V 156
+
Sbjct: 106 I 106
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Query: 11 SSVG------AIELTKNNEYLTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSA 64
SSVG + + + + + F F+F I + R G+ FF+A IP S
Sbjct: 168 SSVGRALFYAPVHIWEKSAVVASFDATFTFLIKSPDRDP-ADGITFFIANTDTSIPSGSG 226
Query: 65 GGILGLL 71
G +LGL
Sbjct: 227 GRLLGLF 233
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 18/124 (14%)
Query: 213 LDMAAAVKNVSRGSKQG-KKEYVTEVKTISQLRHRNLVQLLGCCHDRG-----EFLLVYE 266
L+ AVK KQ + EY EV ++ ++H N++Q +G RG + L+
Sbjct: 46 LNEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGA-EKRGTSVDVDLWLITA 102
Query: 267 FMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEE-------WEQCVVHRDTKSS 319
F GSL F K ++W I+ +A L YL+E+ + + HRD KS
Sbjct: 103 FHEKGSLSD--FLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSK 160
Query: 320 NIML 323
N++L
Sbjct: 161 NVLL 164
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 6/110 (5%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
+ A AVK +S+ + ++ +T +K H N+V+L HD+ LV E + G L
Sbjct: 36 NQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLHEVFHDQLHTFLVMELLNGGEL 93
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
R+ KK Y++ L +A+ ++++ VVHRD K N++
Sbjct: 94 FERIKKKKHFSETEASYIMR-KLVSAVSHMHDVG---VVHRDLKPENLLF 139
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 14/125 (11%)
Query: 212 DLDMAAAVKNVSRGSKQGKKE-YVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMP 269
D + AVK + + +KE ++E+K +S L +H N+V LLG C G L++ E+
Sbjct: 74 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 270 NGSLDARLFGKKRPL----AWAV-------RYMISLGLATALLYLYEEWEQCVVHRDTKS 318
G L L K R L A+A+ R ++ A + + C +HRD +
Sbjct: 134 YGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNC-IHRDVAA 192
Query: 319 SNIML 323
N++L
Sbjct: 193 RNVLL 197
>pdb|3A0K|A Chain A, Crystal Structure Of An Antiflamatory Legume Lectin From
Cymbosema Roseum Seeds
pdb|3A0K|C Chain C, Crystal Structure Of An Antiflamatory Legume Lectin From
Cymbosema Roseum Seeds
pdb|3A0K|E Chain E, Crystal Structure Of An Antiflamatory Legume Lectin From
Cymbosema Roseum Seeds
pdb|3A0K|G Chain G, Crystal Structure Of An Antiflamatory Legume Lectin From
Cymbosema Roseum Seeds
Length = 237
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNGT 155
I+YNS K L+ +Y S +T++ Y +DL VL +WV +G SA TG + T
Sbjct: 50 AHISYNSVAKRLTAVVSYSGSS----STTVSYDVDLTNVLPEWVRVGLSATTGLYKETNT 105
Query: 156 V 156
+
Sbjct: 106 I 106
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 27/97 (27%)
Query: 1 KKILYQGDAIS-SVGAIELTK-------------------------NNEYLTDFSTKFSF 34
K ++ QGDA + S G +ELTK ++ + F F+F
Sbjct: 138 KDLILQGDATTDSDGNLELTKVSSSGSPQGSSVGRALFYAPVHIWESSAVVASFDATFTF 197
Query: 35 QIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLL 71
I + G+ FF+A IP S+G +LGL
Sbjct: 198 LIKSPDSEP-ADGITFFIANTDTSIPSGSSGRLLGLF 233
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 22/130 (16%)
Query: 212 DLDMAAAVKNVSRGSKQGKKE-YVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMP 269
D + AVK + + +KE ++E+K +S L +H N+V LLG C G L++ E+
Sbjct: 74 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 133
Query: 270 NGSLDARLFGKKRPLAWAVRY----------------MISLGLATALLYLYEEWEQCVVH 313
G L +KRP Y S +A + +L + C +H
Sbjct: 134 YGDL-LNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLAS--KNC-IH 189
Query: 314 RDTKSSNIML 323
RD + N++L
Sbjct: 190 RDVAARNVLL 199
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 248 LVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEW 307
+VQL D +V E+MP G L + P WA Y + LA ++
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIH----- 191
Query: 308 EQCVVHRDTKSSNIMLD 324
++HRD K N++LD
Sbjct: 192 SMGLIHRDVKPDNMLLD 208
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 235 TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISL 294
TE++ + +L H ++++ D ++ +V E M G L ++ G KR L A +
Sbjct: 203 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR-LKEATCKLYFY 260
Query: 295 GLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ A+ YL+E ++HRD K N++L
Sbjct: 261 QMLLAVQYLHE---NGIIHRDLKPENVLL 286
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 235 TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISL 294
TE++ + +L H ++++ D ++ +V E M G L ++ G KR L A +
Sbjct: 189 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR-LKEATCKLYFY 246
Query: 295 GLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ A+ YL+E ++HRD K N++L
Sbjct: 247 QMLLAVQYLHE---NGIIHRDLKPENVLL 272
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 213 LDMAAAVKNV---SRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMP 269
L++ A+K + R ++ K + EV SQL H+N+V ++ + + LV E++
Sbjct: 35 LNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIE 94
Query: 270 NGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+L + PL+ + + + + + + +VHRD K NI++D
Sbjct: 95 GPTL-SEYIESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILID 145
>pdb|1UZY|A Chain A, Erythrina Crystagalli Lectin
pdb|1UZY|B Chain B, Erythrina Crystagalli Lectin
pdb|1UZZ|A Chain A, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|B Chain B, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|C Chain C, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1UZZ|D Chain D, Erythrina Cristagalli Bound To N-Linked Oligosaccharide
And Lactose
pdb|1V00|A Chain A, Erythrina Cristagalli Lectin
pdb|1V00|B Chain B, Erythrina Cristagalli Lectin
pdb|1V00|C Chain C, Erythrina Cristagalli Lectin
pdb|1V00|D Chain D, Erythrina Cristagalli Lectin
Length = 242
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 65/162 (40%), Gaps = 41/162 (25%)
Query: 25 LTDFSTKFSFQID-TLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTA-------- 75
+ F T+FSF I+ RP GLVFF+ + G LG+ N +
Sbjct: 67 VASFETRFSFSIEQPYTRPLPADGLVFFMGPTKSK--PAQGYGYLGVFNNSKQDNSYQTL 124
Query: 76 -----SFS----------------STNHIASEDFHRQD--TADVQIAYNSTTKNLSVSWT 112
+FS S I ++ F + A+V I Y++++K L
Sbjct: 125 AVEFDTFSNPWDPPQVPHIGIDVNSIRSIKTQPFQLDNGQVANVVIKYDASSKILLAVLV 184
Query: 113 YRLISDPRENT--SLFYIIDLMKVLSQWVTIGFSAATGHCSD 152
Y P ++ I+D+ +VL +WV +G S ATG D
Sbjct: 185 Y-----PSSGAIYTIAEIVDVKQVLPEWVDVGLSGATGAQRD 221
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 235 TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISL 294
TE++ + +L H ++++ D ++ +V E M G L ++ G KR L A +
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR-LKEATCKLYFY 121
Query: 295 GLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ A+ YL+E ++HRD K N++L
Sbjct: 122 QMLLAVQYLHENG---IIHRDLKPENVLL 147
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+EF+ +DA L G PL +
Sbjct: 50 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GL+ V+HRD K N++++ +
Sbjct: 110 FQLLQGLSFC-------HSHRVLHRDLKPQNLLINTE 139
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 235 TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISL 294
TE++ + +L H ++++ D ++ +V E M G L ++ G KR L A +
Sbjct: 63 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR-LKEATCKLYFY 120
Query: 295 GLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ A+ YL+E ++HRD K N++L
Sbjct: 121 QMLLAVQYLHENG---IIHRDLKPENVLL 146
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLG 295
EV+ + L H N+V+L L+ E+ G + L R R
Sbjct: 61 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-Q 119
Query: 296 LATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +A+ Y +++ +VHRD K+ N++LD D+ I
Sbjct: 120 IVSAVQYCHQKR---IVHRDLKAENLLLDADMNI 150
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 235 TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISL 294
TE++ + +L H ++++ D ++ +V E M G L ++ G KR L A +
Sbjct: 70 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR-LKEATCKLYFY 127
Query: 295 GLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ A+ YL+E ++HRD K N++L
Sbjct: 128 QMLLAVQYLHENG---IIHRDLKPENVLL 153
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 13/112 (11%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLR-HRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
AVK + + + + EV+T+ Q + ++N+++L+ D F LV+E + GS+ A
Sbjct: 42 AVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAH 101
Query: 277 LFGKK----RPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ +K R + VR +A AL +L+ + + HRD K NI+ +
Sbjct: 102 IQKQKHFNEREASRVVR-----DVAAALDFLHTKG---IAHRDLKPENILCE 145
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 235 TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISL 294
TE++ + +L H ++++ D ++ +V E M G L ++ G KR L A +
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR-LKEATCKLYFY 121
Query: 295 GLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ A+ YL+E ++HRD K N++L
Sbjct: 122 QMLLAVQYLHENG---IIHRDLKPENVLL 147
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 235 TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISL 294
TE++ + +L H ++++ D ++ +V E M G L ++ G KR L A +
Sbjct: 64 TEIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKR-LKEATCKLYFY 121
Query: 295 GLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ A+ YL+E ++HRD K N++L
Sbjct: 122 QMLLAVQYLHENG---IIHRDLKPENVLL 147
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 230 KKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVR 289
K +++ E + + Q H N+V+L+G C + +V E + G D F + V+
Sbjct: 156 KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG--DFLTFLRTEGARLRVK 213
Query: 290 YMISL-GLATALLYLYEEWEQCVVHRDTKSSNIML 323
++ + G A A + E +C +HRD + N ++
Sbjct: 214 TLLQMVGDAAAGMEYLE--SKCCIHRDLAARNCLV 246
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 230 KKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVR 289
K +++ E + + Q H N+V+L+G C + +V E + G D F + V+
Sbjct: 156 KAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGG--DFLTFLRTEGARLRVK 213
Query: 290 YMISL-GLATALLYLYEEWEQCVVHRDTKSSNIML 323
++ + G A A + E +C +HRD + N ++
Sbjct: 214 TLLQMVGDAAAGMEYLE--SKCCIHRDLAARNCLV 246
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLG 295
EV+ + L H N+V+L L+ E+ G + L R R
Sbjct: 64 EVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-Q 122
Query: 296 LATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +A+ Y +++ +VHRD K+ N++LD D+ I
Sbjct: 123 IVSAVQYCHQKR---IVHRDLKAENLLLDADMNI 153
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 17/98 (17%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMIS 293
+ EV + +L+HRN+++L H L++E+ N D + + K P +S
Sbjct: 81 IREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAEN---DLKKYMDKNP-------DVS 130
Query: 294 LGLATALLYL------YEEWEQCVVHRDTKSSNIMLDV 325
+ + + LY + +C +HRD K N++L V
Sbjct: 131 MRVIKSFLYQLINGVNFCHSRRC-LHRDLKPQNLLLSV 167
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
D+A + NV+ + Q + + EV + + RH N++ +G + + +V ++ SL
Sbjct: 36 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSL 94
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
L + I+ A + YL+ + ++HRD KS+NI L D
Sbjct: 95 YHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHED 144
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 248 LVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEW 307
+VQL D +V E+MP G L + P WA Y + LA ++
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH----- 185
Query: 308 EQCVVHRDTKSSNIMLD 324
+HRD K N++LD
Sbjct: 186 SMGFIHRDVKPDNMLLD 202
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 248 LVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEW 307
+VQL D +V E+MP G L + P WA Y + LA ++
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH----- 190
Query: 308 EQCVVHRDTKSSNIMLD 324
+HRD K N++LD
Sbjct: 191 SMGFIHRDVKPDNMLLD 207
>pdb|1MVQ|A Chain A, Cratylia Mollis Lectin (Isoform 1) In Complex With
Methyl-Alpha-D- Mannose
Length = 236
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 87 DFHRQDTADVQIAYNSTTKNLSVSWTYRLISDPRENTSLFYIIDLMKVLSQWVTIGFSAA 146
D I+YNS K LS +Y S + ++ Y +DL +L +WV +G SA+
Sbjct: 41 DVQNGKVGTAHISYNSVAKRLSAVVSYPGGS----SATVSYDVDLNNILPEWVRVGLSAS 96
Query: 147 TGHCSDNGTV 156
TG + T+
Sbjct: 97 TGLYKETNTI 106
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLL 71
+ F F+F I + R G+ FF+A IP S G +LGL
Sbjct: 187 VASFDATFTFLIKSPDR-EIADGIAFFIANTDSSIPHGSGGRLLGLF 232
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 248 LVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEW 307
+VQL D +V E+MP G L + P WA Y + LA ++
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH----- 190
Query: 308 EQCVVHRDTKSSNIMLD 324
+HRD K N++LD
Sbjct: 191 SMGFIHRDVKPDNMLLD 207
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
D+A + NV+ + Q + + EV + + RH N++ +G + + +V ++ SL
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSL 106
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
L + I+ A + YL+ + ++HRD KS+NI L D
Sbjct: 107 YHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHED 156
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 230 KKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGK----KRPLA 285
KK TE+ + +L H N+++L E LV E + G L R+ K +R A
Sbjct: 92 KKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAA 151
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
AV+ ++ A+ YL+ E +VHRD K N++
Sbjct: 152 DAVKQILE-----AVAYLH---ENGIVHRDLKPENLL 180
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 220 KNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFG 279
K +++ QG+ E E+ + LRH ++++L + E ++V E+ N D +
Sbjct: 50 KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR 107
Query: 280 KKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
K A R+ + A + ++ +VHRD K N++LD
Sbjct: 108 DKMSEQEARRFFQQIISAVEYCHRHK-----IVHRDLKPENLLLD 147
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 220 KNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFG 279
K +++ QG+ E E+ + LRH ++++L + E ++V E+ N D +
Sbjct: 44 KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR 101
Query: 280 KKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
K A R+ + A + ++ +VHRD K N++LD
Sbjct: 102 DKMSEQEARRFFQQIISAVEYCHRHK-----IVHRDLKPENLLLD 141
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 228 QGKKEYVTEVKTISQ--LRHRNLVQLLGCCHDRG-----EFLLVYEFMPNGSLDARLFGK 280
Q K+ + +E + S ++H NL+Q + RG E L+ F GSL L G
Sbjct: 49 QDKQSWQSEREIFSTPGMKHENLLQFIAA-EKRGSNLEVELWLITAFHDKGSLTDYLKGN 107
Query: 281 KRPLAWAVRYMISLGLATALLYLYEEWEQC--------VVHRDTKSSNIMLDVDV 327
+ W ++ ++ L YL+E+ C + HRD KS N++L D+
Sbjct: 108 I--ITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDL 160
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 37.0 bits (84), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 220 KNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFG 279
K +++ QG+ E E+ + LRH ++++L + E ++V E+ N D +
Sbjct: 49 KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR 106
Query: 280 KKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
K A R+ + A + ++ +VHRD K N++LD
Sbjct: 107 DKMSEQEARRFFQQIISAVEYCHRHK-----IVHRDLKPENLLLD 146
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 220 KNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFG 279
K +++ QG+ E E+ + LRH ++++L + E ++V E+ N D +
Sbjct: 40 KVLAKSDMQGRIE--REISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR 97
Query: 280 KKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
K A R+ + A + ++ +VHRD K N++LD
Sbjct: 98 DKMSEQEARRFFQQIISAVEYCHRHK-----IVHRDLKPENLLLD 137
>pdb|2YZ4|A Chain A, The Neutron Structure Of Concanavalin A At 2.2 Angstroms
Length = 237
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPR-ENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNG 154
I YNS K LS ++S P ++ ++ Y +DL VL +WV +G SA+TG +
Sbjct: 50 AHIIYNSVDKRLSA-----VVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETN 104
Query: 155 TV 156
T+
Sbjct: 105 TI 106
>pdb|2CTV|A Chain A, High Resolution Crystallographic Studies Of Native
Concanavalin A Using Rapid Laue Data Collection Methods
And The Introduction Of A Monochromatic Large-Angle
Oscillation Technique (Lot)
pdb|1CON|A Chain A, The Refined Structure Of Cadmium Substituted Concanavalin
A At 2.0 Angstroms Resolution
pdb|5CNA|A Chain A, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|B Chain B, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|C Chain C, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|5CNA|D Chain D, Refined Structure Of Concanavalin A Complexed With Alpha-
Methyl-D-Mannopyranoside At 2.0 Angstroms Resolution And
Comparison With The Saccharide-Free Structure
pdb|1APN|A Chain A, The Crystallographic Structure Of Metal-Free Concanavalin
A At 2.5 Angstroms Resolution
pdb|1APN|B Chain B, The Crystallographic Structure Of Metal-Free Concanavalin
A At 2.5 Angstroms Resolution
pdb|1CVN|A Chain A, Concanavalin A Complexed To Trimannoside
pdb|1CVN|B Chain B, Concanavalin A Complexed To Trimannoside
pdb|1CVN|C Chain C, Concanavalin A Complexed To Trimannoside
pdb|1CVN|D Chain D, Concanavalin A Complexed To Trimannoside
pdb|1ENS|A Chain A, Crystals Of Demetallized Concanavalin A Soaked With Cobalt
Having A Cobalt Ion Bound In The S1 Site
pdb|1ENS|B Chain B, Crystals Of Demetallized Concanavalin A Soaked With Cobalt
Having A Cobalt Ion Bound In The S1 Site
pdb|1ENQ|A Chain A, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|B Chain B, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|C Chain C, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1ENQ|D Chain D, Co-Crystals Of Demetallized Concanavalin A With Zinc
Having A Zinc Ion Bound In The S1 Site
pdb|1CES|A Chain A, Crystals Of Demetallized Concanavalin A Soaked With Zinc
Have A Zinc Ion Bound In The S1 Site
pdb|1CES|B Chain B, Crystals Of Demetallized Concanavalin A Soaked With Zinc
Have A Zinc Ion Bound In The S1 Site
pdb|1VAL|A Chain A, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|B Chain B, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|C Chain C, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAL|D Chain D, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Glucopyranoside
pdb|1VAM|A Chain A, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|B Chain B, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|C Chain C, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VAM|D Chain D, Concanavalin A Complex With 4'-Nitrophenyl-Alpha-D-
Mannopyranoside
pdb|1VLN|A Chain A, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|B Chain B, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|C Chain C, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|D Chain D, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|E Chain E, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|F Chain F, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|G Chain G, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1VLN|H Chain H, A Triclinic Crystal Form Of The Lectin Concanavalin A
pdb|1GIC|A Chain A, Concanavalin A Complexed With Methyl
Alpha-d-glucopyranoside
pdb|1GIC|B Chain B, Concanavalin A Complexed With Methyl
Alpha-d-glucopyranoside
pdb|1TEI|A Chain A, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|B Chain B, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|C Chain C, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|D Chain D, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|E Chain E, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|F Chain F, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|G Chain G, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1TEI|H Chain H, Structure Of Concanavalin A Complexed To Beta-D-Glcnac
(1,2)alpha-D- Man-(1,6)[beta-D-Glcnac(1,2)alpha-D-Man
(1,6)]alpha-D-Man
pdb|1ONA|A Chain A, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|B Chain B, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|C Chain C, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1ONA|D Chain D, Co-Crystals Of Concanavalin A With
Methyl-3,6-Di-O-(Alpha-D-
Mannopyranosyl)-Alpha-D-Mannopyranoside
pdb|1CJP|A Chain A, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|B Chain B, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|C Chain C, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1CJP|D Chain D, Concanavalin A Complex With 4'-Methylumbelliferyl-Alpha-D-
Glucopyranoside
pdb|1BXH|A Chain A, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|B Chain B, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|C Chain C, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1BXH|D Chain D, Concanavalin A Complexed To Methyl Alpha1-2 Mannobioside
pdb|1QGL|A Chain A, Room Temperature Structure Of Concanavalin A Complexed To
Bivalent Ligand
pdb|1QGL|B Chain B, Room Temperature Structure Of Concanavalin A Complexed To
Bivalent Ligand
pdb|1QDC|A Chain A, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|B Chain B, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|C Chain C, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDC|D Chain D, Man(aplha1-6)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|A Chain A, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|B Chain B, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|C Chain C, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1QDO|D Chain D, Man(aplha1-3)man(alpha1-o)methyl Concanavalin A Complex
pdb|1DQ0|A Chain A, Locked, Metal-Free Concanavalin A, A Minor Species In
Solution
pdb|1DQ1|A Chain A, Calcium;calcium Concanavalin A
pdb|1DQ2|A Chain A, Unlocked Metal-Free Concanavalin A
pdb|1DQ2|B Chain B, Unlocked Metal-Free Concanavalin A
pdb|1DQ4|A Chain A, A Transient Unlocked Concanavalin A Structure With Mn2+
Bound In The Transition Metal Ion Binding Site S1 And An
Empty Calcium Binding Site S2
pdb|1DQ4|B Chain B, A Transient Unlocked Concanavalin A Structure With Mn2+
Bound In The Transition Metal Ion Binding Site S1 And An
Empty Calcium Binding Site S2
pdb|1DQ5|A Chain A, Manganese;manganese Concanavalin A At Ph 5.0
pdb|1DQ6|A Chain A, Manganese;manganese Concanavalin A At Ph 7.0
pdb|1QNY|A Chain A, X-Ray Refinement Of D2o Soaked Crystal Of Concanavalin A
pdb|1C57|A Chain A, Direct Determination Of The Positions Of Deuterium Atoms
Of Bound Water In Concanavalin A By Neutron Laue
Crystallography
pdb|3ENR|A Chain A, Zinc-Calcium Concanavalin A At Ph 6.15
pdb|3ENR|B Chain B, Zinc-Calcium Concanavalin A At Ph 6.15
pdb|1I3H|A Chain A, Concanavalin A-Dimannose Structure
pdb|1GKB|A Chain A, Concanavalin A, New Crystal Form
pdb|1GKB|B Chain B, Concanavalin A, New Crystal Form
pdb|1JW6|A Chain A, Crystal Structure Of The Complex Of Concanavalin A And
Hexapeptide
pdb|1JOJ|A Chain A, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|B Chain B, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|C Chain C, Concanavalin A-Hexapeptide Complex
pdb|1JOJ|D Chain D, Concanavalin A-Hexapeptide Complex
pdb|1JUI|A Chain A, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|B Chain B, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|C Chain C, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JUI|D Chain D, Concanavalin A-Carbohydrate Mimicking 10-Mer Peptide
Complex
pdb|1JYC|A Chain A, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|B Chain B, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|C Chain C, Concanavalin A15-Mer Peptide Complex
pdb|1JYC|D Chain D, Concanavalin A15-Mer Peptide Complex
pdb|1JYI|A Chain A, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|B Chain B, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|C Chain C, Concanavalin A/12-mer Peptide Complex
pdb|1JYI|D Chain D, Concanavalin A/12-mer Peptide Complex
pdb|1JN2|P Chain P, Crystal Structure Of Meso-Tetrasulphonatophenyl Porphyrin
Complexed With Concanavalin A
pdb|1HQW|A Chain A, Crystal Structure Of The Complex Of Concanavalin A With A
Tripeptide Ypy
pdb|1NXD|1 Chain 1, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|2 Chain 2, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|3 Chain 3, Crystal Structure Of Mnmn Concanavalin A
pdb|1NXD|4 Chain 4, Crystal Structure Of Mnmn Concanavalin A
pdb|1XQN|A Chain A, The 15k Neutron Structure Of Saccharide-Free Concanavalin
A
pdb|2A7A|A Chain A, On The Routine Use Of Soft X-Rays In Macromolecular
Crystallography, Part Iii- The Optimal Data Collection
Wavelength
pdb|2G4I|A Chain A, Anomalous Substructure Of Concanavalin A
pdb|1ENR|A Chain A, Co-Crystals Of Demetallized Concanavalin A With Zinc And
Calcium Having A Zinc Ion Bound In The S1 Site And A
Calcium Ion Bound In The S2 Site
pdb|1JBC|A Chain A, Concanavalin A
pdb|1NLS|A Chain A, Concanavalin A And Its Bound Solvent At 0.94a Resolution
pdb|1SCR|A Chain A, High-Resolution Structures Of Single-Metal-Substituted
Concanavalin A: The Co,Ca-Protein At 1.6 Angstroms And
The Ni,Ca-Protein At 2.0 Angstroms
pdb|1SCS|A Chain A, High-Resolution Structures Of Single-Metal-Substituted
Concanavalin A: The Co,Ca-Protein At 1.6 Angstroms And
The Ni,Ca-Protein At 2.0 Angstroms
pdb|2ENR|A Chain A, Co-crystals Of Demetallized Concanavalin A With Cadmium
Having A Cadmium Ion Bound In Both The S1 Site And The
S2 Site
pdb|2UU8|A Chain A, X-Ray Structure Of Ni, Ca Concanavalin A At Ultra-High
Resolution (0.94a)
pdb|3D4K|A Chain A, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|B Chain B, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|C Chain C, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3D4K|D Chain D, Concanavalin A Complexed To A Synthetic Analog Of The
Trimannoside
pdb|3NWK|A Chain A, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|B Chain B, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|C Chain C, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3NWK|D Chain D, A Second C2221 Form Of Concanavalin A (Canavalia
Ensiformis)
pdb|3QLQ|A Chain A, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|B Chain B, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|C Chain C, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
pdb|3QLQ|D Chain D, Crystal Structure Of Concanavalin A Bound To An
Octa-Alpha-Mannosyl- Octasilsesquioxane Cluster
Length = 237
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPR-ENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNG 154
I YNS K LS ++S P ++ ++ Y +DL VL +WV +G SA+TG +
Sbjct: 50 AHIIYNSVDKRLSA-----VVSYPNADSATVSYDVDLDNVLPEWVRVGLSASTGLYKETN 104
Query: 155 TV 156
T+
Sbjct: 105 TI 106
>pdb|3U4X|A Chain A, Crystal Structure Of A Lectin From Camptosema Pedicellatum
Seeds In Complex With
5-Bromo-4-Chloro-3-Indolyl-Alpha-D-Mannose
Length = 236
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPR-ENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNG 154
I+YNS K LS ++S P + ++ Y +DL +L +WV +G SA+TG +
Sbjct: 50 AHISYNSVAKRLSA-----IVSYPGGSSATVSYDVDLNNILPEWVRVGLSASTGVYKETN 104
Query: 155 TV 156
T+
Sbjct: 105 TI 106
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 14/90 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL-----FGKKRPLAWAVRY 290
E++ + L H N+++L +DR L+ E+ P G L L F ++R
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTAT----- 127
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSN 320
I LA AL+Y + + V+HRD K N
Sbjct: 128 -IMEELADALMYCH---GKKVIHRDIKPEN 153
>pdb|1AZD|A Chain A, Concanavalin From Canavalia Brasiliensis
pdb|1AZD|B Chain B, Concanavalin From Canavalia Brasiliensis
pdb|1AZD|C Chain C, Concanavalin From Canavalia Brasiliensis
pdb|1AZD|D Chain D, Concanavalin From Canavalia Brasiliensis
pdb|3JU9|A Chain A, Crystal Structure Of A Lectin From Canavalia Brasiliensis
Seed (conbr) Complexed With Alpha-aminobutyric Acid
pdb|4H55|A Chain A, Crystal Structure Of Canavalia Brasiliensis Seed Lectin
(Conbr) In Complex With Beta-D-Ribofuranose
Length = 237
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPR-ENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNG 154
I YNS K LS ++S P ++ ++ Y +DL VL +WV +G SA+TG +
Sbjct: 50 AHIIYNSVGKRLSA-----VVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETN 104
Query: 155 TV 156
T+
Sbjct: 105 TI 106
>pdb|2D3P|A Chain A, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|B Chain B, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|C Chain C, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3P|D Chain D, Cratylia Floribunda Seed Lectin Crystallized At Basic Ph
pdb|2D3R|A Chain A, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|B Chain B, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|C Chain C, Cratylia Folibunda Seed Lectin At Acidic Ph
pdb|2D3R|D Chain D, Cratylia Folibunda Seed Lectin At Acidic Ph
Length = 236
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPR-ENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNG 154
I+YNS K LS ++S P + ++ Y +DL +L +WV +G SA+TG +
Sbjct: 50 AHISYNSVAKRLSA-----IVSYPGGSSATVSYDVDLNNILPEWVRVGLSASTGLYKETN 104
Query: 155 TV 156
T+
Sbjct: 105 TI 106
>pdb|2OVU|A Chain A, Crystal Strucure Of A Lectin From Canavalia Gladiata (Cgl)
In Complex With Man1-2man-Ome
Length = 237
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPR-ENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNG 154
I YNS K LS ++S P ++ ++ Y +DL VL +WV +G SA+TG +
Sbjct: 50 AHIIYNSVGKRLSA-----VVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETN 104
Query: 155 TV 156
T+
Sbjct: 105 TI 106
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L C D + + NG L + K
Sbjct: 77 KENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 135
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 136 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 176
>pdb|1WUV|A Chain A, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|1WUV|D Chain D, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|1WUV|G Chain G, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|1WUV|J Chain J, Crystal Structure Of Native Canavalia Gladiata Lectin
(Cgl): A Tetrameric Cona-Like Lectin
pdb|2D7F|A Chain A, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2D7F|F Chain F, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2D7F|L Chain L, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2D7F|S Chain S, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds Complexed With Alpha-Methyl-Mannoside And Alpha-
Aminobutyric Acid
pdb|2EF6|A Chain A, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2EF6|B Chain B, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2EF6|C Chain C, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2EF6|D Chain D, Canavalia Gladiata Lectin Complexed With Man1-3man-Ome
pdb|2P2K|A Chain A, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
pdb|2P2K|B Chain B, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
pdb|2P2K|C Chain C, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
pdb|2P2K|D Chain D, Crystal Structure Of A Lectin From Canavalia Gladiata
Seeds (Cgl) In Complex With Man1-4man-Ome
Length = 237
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPR-ENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNG 154
I YNS K LS ++S P ++ ++ Y +DL VL +WV +G SA+TG +
Sbjct: 50 AHIIYNSVGKRLSA-----VVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETN 104
Query: 155 TV 156
T+
Sbjct: 105 TI 106
>pdb|2OW4|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Conm) In Complex With Man1-2man-Ome
Length = 237
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPR-ENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNG 154
I YNS K LS ++S P ++ ++ Y +DL VL +WV +G SA+TG +
Sbjct: 50 AHIIYNSVGKRLSA-----VVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETN 104
Query: 155 TV 156
T+
Sbjct: 105 TI 106
>pdb|2CWM|A Chain A, Native Crystal Structure Of No Releasing Inductive Lectin
From Seeds Of The Canavalia Maritima (Conm)
pdb|2CWM|D Chain D, Native Crystal Structure Of No Releasing Inductive Lectin
From Seeds Of The Canavalia Maritima (Conm)
pdb|2CY6|A Chain A, Crystal Structure Of Conm In Complex With Trehalose And
Maltose
pdb|2CY6|D Chain D, Crystal Structure Of Conm In Complex With Trehalose And
Maltose
pdb|2CYF|A Chain A, The Crystal Structure Of Canavalia Maritima Lectin (Conm)
In Complex With Trehalose And Maltose
pdb|2CYF|C Chain C, The Crystal Structure Of Canavalia Maritima Lectin (Conm)
In Complex With Trehalose And Maltose
pdb|2P37|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P37|B Chain B, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P37|C Chain C, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P37|D Chain D, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-3man-Ome
pdb|2P34|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|2P34|B Chain B, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|2P34|C Chain C, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|2P34|D Chain D, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds (Cml) In Complex With Man1-4man-Ome
pdb|3SNM|A Chain A, Crystal Structure Of A Lectin From Canavalia Maritima
Seeds Complexed With Indole-3-Acetic Acid
pdb|4I30|A Chain A, Crystal Structure Of Canavalia Maritima Seeds Lectin
(Conm) Co- Crystalized With Gamma-Aminobutyric Acid
(Gaba) And Soaked With Adenine
Length = 237
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 96 VQIAYNSTTKNLSVSWTYRLISDPR-ENTSLFYIIDLMKVLSQWVTIGFSAATGHCSDNG 154
I YNS K LS ++S P ++ ++ Y +DL VL +WV +G SA+TG +
Sbjct: 50 AHIIYNSVGKRLSA-----VVSYPNGDSATVSYDVDLDNVLPEWVRVGLSASTGLYKETN 104
Query: 155 TV 156
T+
Sbjct: 105 TI 106
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 219 VKNVSRGSKQGKKEYV-TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
+K +++ Q E + E++ + L H N++++ D +V E G L R+
Sbjct: 52 IKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERI 111
Query: 278 F-GKKRPLAWAVRYMISL--GLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ R A + Y+ L + AL Y + Q VVH+D K NI+
Sbjct: 112 VSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILF 157
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 21/126 (16%)
Query: 206 KMGYLIDLDMAAAVKNVSR-GSKQGKKEYVTEVKTISQLRHRN---LVQLLGCCHDRGEF 261
K G++I AVK + R G+K+ K + ++ + L+ + +VQ G +
Sbjct: 48 KTGHVI------AVKQMRRSGNKEENKRILMDLDVV--LKSHDCPYIVQCFGTFITNTDV 99
Query: 262 LLVYEFMPNGSLDARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKS 318
+ E M G+ +L KKR P+ + +++ + AL YL E+ V+HRD K
Sbjct: 100 FIAMELM--GTCAEKL--KKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKP 153
Query: 319 SNIMLD 324
SNI+LD
Sbjct: 154 SNILLD 159
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 23/133 (17%)
Query: 213 LDMAAAVKNVSRGSKQGKKE-YVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPN 270
+ + AVK + + ++E ++E+K ++QL H N+V LLG C G L++E+
Sbjct: 74 VSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCY 133
Query: 271 GSLDARLFGKKRPLAW-AVRY-----------MISLGLATALLYLYE--------EWEQC 310
G L L K+ + + Y + L L + Y+ E++ C
Sbjct: 134 GDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSC 193
Query: 311 VVHRDTKSSNIML 323
VHRD + N+++
Sbjct: 194 -VHRDLAARNVLV 205
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
D+A + NV+ + Q + + EV + + RH N++ +G + + +V ++ SL
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSL 95
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
L + I+ A + YL+ + ++HRD KS+NI L D+ +
Sbjct: 96 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 148
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 229 GKKEYVTEVKTISQLRHRNLVQLLGCCH--DRGEFLLVYEFMPNG---SLDARLFGKKRP 283
G+ E++ + +LRH+N++QL+ + ++ + +V E+ G LD+ + K+ P
Sbjct: 49 GEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDS-VPEKRFP 107
Query: 284 LAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ A Y L L YL+ Q +VH+D K N++L
Sbjct: 108 VCQAHGYFCQ--LIDGLEYLH---SQGIVHKDIKPGNLLL 142
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
D+A + NV+ + Q + + EV + + RH N++ +G + + +V ++ SL
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSL 90
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
L + I+ A + YL+ + ++HRD KS+NI L D+ +
Sbjct: 91 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 143
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
D+A + NV+ + Q + + EV + + RH N++ +G + + +V ++ SL
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSL 90
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
L + I+ A + YL+ + ++HRD KS+NI L D+ +
Sbjct: 91 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 143
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
D+A + NV+ + Q + + EV + + RH N++ +G + + +V ++ SL
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSL 95
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
L + I+ A + YL+ + ++HRD KS+NI L D+ +
Sbjct: 96 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 148
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
D+A + NV+ + Q + + EV + + RH N++ +G + + +V ++ SL
Sbjct: 34 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSL 92
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
L + I+ A + YL+ + ++HRD KS+NI L D+ +
Sbjct: 93 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 145
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 215 MAAAVKNVSR-GSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
+ AVK + S+Q + +++ E IS+L H+N+V+ +G ++ E M G L
Sbjct: 62 LQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDL 121
Query: 274 DARLF-GKKRPLAWAVRYMISL-----GLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ L + RP + M+ L +A YL E +HRD + N +L
Sbjct: 122 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLL 174
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 10/116 (8%)
Query: 215 MAAAVKNVSR-GSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
+ AVK + S+Q + +++ E IS+L H+N+V+ +G ++ E M G L
Sbjct: 76 LQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDL 135
Query: 274 DARLFG-KKRPLAWAVRYMISL-----GLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ L + RP + M+ L +A YL E +HRD + N +L
Sbjct: 136 KSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLL 188
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPN---GSLDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+E + +DA L G PL +
Sbjct: 53 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYL 112
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 113 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 142
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 21/109 (19%)
Query: 232 EYVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRY 290
+ V+E++ + + +H+N++ LLG C G ++ E+ G+L L +RP Y
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA-RRPPGMEXSY 144
Query: 291 MI----------------SLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
I + LA + YL Q +HRD + N+++
Sbjct: 145 DINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 234 VTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMI 292
V+E++ + + +H+N++ LLG C G ++ E+ G+L L +RP Y I
Sbjct: 88 VSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRA-RRPPGMEYSYDI 146
Query: 293 ----------------SLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ LA + YL Q +HRD + N+++
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + ++++ E+M GSL L
Sbjct: 46 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFL 103
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 104 KGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 147
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 232 EYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL---DARLFGKKRPLAWAV 288
++ E++ I+ +++ + G + E ++YE+M N S+ D F + +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 289 RYMISLGLATALL--YLYEEWEQCVVHRDTKSSNIMLD 324
+ + ++L + Y E+ + HRD K SNI++D
Sbjct: 149 PIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD 186
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
D+A + NV+ + Q + + EV + + RH N++ +G + + +V ++ SL
Sbjct: 52 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSL 110
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
L + I+ A + YL+ + ++HRD KS+NI L D+ +
Sbjct: 111 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 163
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + +V E+M GSL L
Sbjct: 212 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL 269
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 270 KGETGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 313
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 11/97 (11%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS---LDAR-LFGKKRPLAWAVR 289
+ E+ + +L H N+V+LL H + LV+E + +DA L G PL +
Sbjct: 49 IREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYL 108
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + GLA V+HRD K N++++ +
Sbjct: 109 FQLLQGLAFC-------HSHRVLHRDLKPQNLLINTE 138
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 234 VTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMI 292
V+E++ + + +H+N++ LLG C G ++ E+ G+L L +RP Y I
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA-RRPPGMEYSYDI 146
Query: 293 ----------------SLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ LA + YL Q +HRD + N+++
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 4/113 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
D+A + NV+ + Q + + EV + + RH N++ +G + +V ++ SL
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSL 106
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
L + I+ A + YL+ + ++HRD KS+NI L D
Sbjct: 107 YHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHED 156
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 35.4 bits (80), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + ++++ E+M GSL L
Sbjct: 46 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVI-EYMSKGSLLDFL 103
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 104 KGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 147
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 60/124 (48%), Gaps = 16/124 (12%)
Query: 218 AVKNV-SRGSKQGKKEYVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDA 275
AVK + S +++ + ++E++ + + +H+N++ LLG C G ++ E+ G+L
Sbjct: 105 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 164
Query: 276 RLFGKKRP-LAWAV------------RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
L ++ P L ++ + ++S A Y ++C +HRD + N++
Sbjct: 165 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVL 223
Query: 323 LDVD 326
+ D
Sbjct: 224 VTED 227
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + +V E+M GSL L
Sbjct: 295 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL 352
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 353 KGETGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 396
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 234 VTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMI 292
V+E++ + + +H+N++ LLG C G ++ E+ G+L L +RP Y I
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA-RRPPGMEYSYDI 146
Query: 293 ----------------SLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ LA + YL Q +HRD + N+++
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
D+A + NV+ + Q + + EV + + RH N++ +G + + +V ++ SL
Sbjct: 59 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSL 117
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
L + I+ A + YL+ + ++HRD KS+NI L D+ +
Sbjct: 118 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 170
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 35.4 bits (80), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + +V E+M GSL L
Sbjct: 212 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL 269
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 270 KGETGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 313
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
D+A + NV+ + Q + + EV + + RH N++ +G + + +V ++ SL
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSL 118
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
L + I+ A + YL+ + ++HRD KS+NI L D+ +
Sbjct: 119 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 171
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 234 VTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMI 292
V+E++ + + +H+N++ LLG C G ++ E+ G+L L +RP Y I
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA-RRPPGMEYSYDI 146
Query: 293 ----------------SLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ LA + YL Q +HRD + N+++
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS-LDAR 276
A+K + G+ + ++ E + + +L+H LVQL + +V E+M GS LD
Sbjct: 37 AIKTLKPGT-MSPESFLEEAQIMKKLKHDKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFL 94
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ R L ++ +A + Y+ +HRD +S+NI++
Sbjct: 95 KDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILV 138
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 234 VTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMI 292
V+E++ + + +H+N++ LLG C G ++ E+ G+L L +RP Y I
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA-RRPPGMEYSYDI 146
Query: 293 ----------------SLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ LA + YL Q +HRD + N+++
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
D+A + NV+ + Q + + EV + + RH N++ +G + + +V ++ SL
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TKPQLAIVTQWCEGSSL 118
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
L + I+ A + YL+ + ++HRD KS+NI L D+ +
Sbjct: 119 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 171
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 58/136 (42%), Gaps = 27/136 (19%)
Query: 212 DLDMAAAVKNVSRGSKQGKKE-YVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMP 269
D + AVK + + +KE ++E+K +S L +H N+V LLG C G L++ E+
Sbjct: 59 DAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCC 118
Query: 270 NGSL--------------------DARLFGKK--RPLAWAVRYMISLGLATALLYLYEEW 307
G L D K+ RPL S +A + +L
Sbjct: 119 YGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLAS-- 176
Query: 308 EQCVVHRDTKSSNIML 323
+ C +HRD + N++L
Sbjct: 177 KNC-IHRDVAARNVLL 191
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 234 VTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMI 292
V+E++ + + +H+N++ LLG C G ++ E+ G+L L +RP Y I
Sbjct: 80 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA-RRPPGMEYSYDI 138
Query: 293 ----------------SLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ LA + YL Q +HRD + N+++
Sbjct: 139 NRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 182
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 35.4 bits (80), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 21/109 (19%)
Query: 232 EYVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRY 290
+ V+E++ + + +H+N++ LLG C G ++ E+ G+L L +RP Y
Sbjct: 132 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA-RRPPGMEYSY 190
Query: 291 MI----------------SLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
I + LA + YL Q +HRD + N+++
Sbjct: 191 DINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 236
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 234 VTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMI 292
V+E++ + + +H+N++ LLG C G ++ E+ G+L L +RP Y I
Sbjct: 77 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA-RRPPGMEYSYDI 135
Query: 293 ----------------SLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ LA + YL Q +HRD + N+++
Sbjct: 136 NRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 179
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 230 KKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSLDARLFG--KKRPL- 284
K+ V+EV + +L+H N+V+ DR +V E+ G L + + K+R
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 285 --AWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ +R M L LA + + V+HRD K +N+ LD
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 150
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + +V E+M GSL L
Sbjct: 36 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIXIVTEYMSKGSLLDFL 93
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 94 KGETGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 137
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 230 KKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSLDARLFG--KKRPL- 284
K+ V+EV + +L+H N+V+ DR +V E+ G L + + K+R
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 285 --AWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ +R M L LA + + V+HRD K +N+ LD
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 150
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 234 VTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMI 292
V+E++ + + +H+N++ LLG C G ++ E+ G+L L +RP Y I
Sbjct: 75 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRA-RRPPGMEYSYDI 133
Query: 293 ----------------SLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ LA + YL Q +HRD + N+++
Sbjct: 134 NRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLTARNVLV 177
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + +V E+M GSL L
Sbjct: 213 AIKTLKPGN-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL 270
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 271 KGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 314
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 49/95 (51%), Gaps = 5/95 (5%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRP-LAWAVRYMISL 294
E+ +S++ H N++++L ++G F LV E +G LD F + P L + I
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSG-LDLFAFIDRHPRLDEPLASYIFR 137
Query: 295 GLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
L +A+ YL + ++HRD K NI++ D I
Sbjct: 138 QLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTI 169
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%), Gaps = 21/107 (19%)
Query: 234 VTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMI 292
V+E++ + + +H+N++ LLG C G ++ E+ G+L L +RP Y I
Sbjct: 88 VSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRA-RRPPGMEYSYDI 146
Query: 293 ----------------SLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ LA + YL Q +HRD + N+++
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + + +V E+M GSL L
Sbjct: 39 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFL 96
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 97 KGETGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 140
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + +V E+M GSL L
Sbjct: 212 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVGEYMSKGSLLDFL 269
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 270 KGETGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 313
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 35.0 bits (79), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 230 KKEYVTEVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSLDARLFG--KKRPL- 284
K+ V+EV + +L+H N+V+ DR +V E+ G L + + K+R
Sbjct: 49 KQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYL 108
Query: 285 --AWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ +R M L LA + + V+HRD K +N+ LD
Sbjct: 109 DEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD 150
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 35.0 bits (79), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + + +V E+M GSL L
Sbjct: 37 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFL 94
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 95 KGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 138
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.0 bits (79), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 218 AVKNV-SRGSKQGKKEYVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDA 275
AVK + S +++ + ++E++ + + +H+N++ LLG C G ++ E+ G+L
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 123
Query: 276 RLFGKKRP-------------LAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
L ++ P + + ++S A Y ++C +HRD + N++
Sbjct: 124 YLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVL 182
Query: 323 LDVD 326
+ D
Sbjct: 183 VTED 186
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + + +V E+M GSL L
Sbjct: 35 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIY-IVTEYMSKGSLLDFL 92
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 93 KGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 136
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + +V E+M GSL L
Sbjct: 46 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL 103
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 104 KGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 147
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMIS 293
+ E+ + +L+H N+V+L H + +LV+E LD L K+ L + S
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFE-----HLDQDL---KKLLDVCEGGLES 99
Query: 294 LGLATALLYLYEEWEQC----VVHRDTKSSNIMLDVDVEI 329
+ + LL L C V+HRD K N++++ + E+
Sbjct: 100 VTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL 139
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/118 (20%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 223 SRGSKQGKKEYVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKK 281
S +++ + ++E++ + + +H+N++ LLG C G ++ E+ G+L L ++
Sbjct: 63 SDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 122
Query: 282 RP-LAWAV------------RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
P L ++ + ++S A Y ++C +HRD + N+++ D
Sbjct: 123 PPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVLVTED 179
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMIS 293
+ E+ + +L+H N+V+L H + +LV+E LD L K+ L + S
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFE-----HLDQDL---KKLLDVCEGGLES 99
Query: 294 LGLATALLYLYEEWEQC----VVHRDTKSSNIMLDVDVEI 329
+ + LL L C V+HRD K N++++ + E+
Sbjct: 100 VTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL 139
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 60/124 (48%), Gaps = 16/124 (12%)
Query: 218 AVKNV-SRGSKQGKKEYVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDA 275
AVK + S +++ + ++E++ + + +H+N++ LLG C G ++ E+ G+L
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 123
Query: 276 RLFGKKRP-LAWAV------------RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
L ++ P L ++ + ++S A Y ++C +HRD + N++
Sbjct: 124 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVL 182
Query: 323 LDVD 326
+ D
Sbjct: 183 VTED 186
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 12/100 (12%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMIS 293
+ E+ + +L+H N+V+L H + +LV+E LD L K+ L + S
Sbjct: 48 IREISILKELKHSNIVKLYDVIHTKKRLVLVFE-----HLDQDL---KKLLDVCEGGLES 99
Query: 294 LGLATALLYLYEEWEQC----VVHRDTKSSNIMLDVDVEI 329
+ + LL L C V+HRD K N++++ + E+
Sbjct: 100 VTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL 139
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + +V E+M GSL L
Sbjct: 46 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVCEYMSKGSLLDFL 103
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 104 KGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 147
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/118 (20%), Positives = 56/118 (47%), Gaps = 15/118 (12%)
Query: 223 SRGSKQGKKEYVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKK 281
S +++ + ++E++ + + +H+N++ LLG C G ++ E+ G+L L ++
Sbjct: 62 SDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARR 121
Query: 282 RP-LAWAV------------RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
P L ++ + ++S A Y ++C +HRD + N+++ D
Sbjct: 122 PPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVLVTED 178
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 15/97 (15%)
Query: 234 VTEVKTISQLR-HRNLVQLLGCCHDRGEFLLVYEFMPNGSL-----DARLFGKKRPLAWA 287
+TE + +S R H L QL C V EF+ G L +R F + R +A
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYA 130
Query: 288 VRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ +AL++L++ + +++RD K N++LD
Sbjct: 131 AE------IISALMFLHD---KGIIYRDLKLDNVLLD 158
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 34.7 bits (78), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 60/124 (48%), Gaps = 16/124 (12%)
Query: 218 AVKNV-SRGSKQGKKEYVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDA 275
AVK + S +++ + ++E++ + + +H+N++ LLG C G ++ E+ G+L
Sbjct: 53 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 112
Query: 276 RLFGKKRP-LAWAV------------RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
L ++ P L ++ + ++S A Y ++C +HRD + N++
Sbjct: 113 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVL 171
Query: 323 LDVD 326
+ D
Sbjct: 172 VTED 175
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 34.7 bits (78), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + +V E+M GSL L
Sbjct: 43 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFL 100
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 101 KGETGKYLRLPQLVDMSAQIASGMAYVERMNY-------VHRDLRAANILV 144
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 218 AVKNV-SRGSKQGKKEYVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDA 275
AVK + S +++ + ++E++ + + +H+N++ LLG C G ++ E+ G+L
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 123
Query: 276 RLFGKKRP-------------LAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
L ++ P + + ++S A Y ++C +HRD + N++
Sbjct: 124 YLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVL 182
Query: 323 LDVD 326
+ D
Sbjct: 183 VTED 186
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 34.7 bits (78), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 218 AVKNVSRGSKQGKKEYV-TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
A+K +++ + +GK+ + E+ + +++H N+V L G L+ + + G L R
Sbjct: 47 AIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDR 106
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM---LDVDVEIWTS 332
+ K +I + A+ YL+ + +VHRD K N++ LD D +I S
Sbjct: 107 IVEKGFYTERDASRLI-FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMIS 161
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 34.7 bits (78), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
+ AA + N + S + ++ E + L+H N+V+L + G L+++ + G L
Sbjct: 49 EYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL 108
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ ++ + I + A+L+ + + VVHRD K N++L
Sbjct: 109 FEDIVAREYYSEADASHCIQ-QILEAVLHCH---QMGVVHRDLKPENLLL 154
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 218 AVKNVSRGSKQGKKEYV-TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
A+K +++ + +GK+ + E+ + +++H N+V L G L+ + + G L R
Sbjct: 47 AIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDR 106
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM---LDVDVEIWTS 332
+ K +I + A+ YL+ + +VHRD K N++ LD D +I S
Sbjct: 107 IVEKGFYTERDASRLI-FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMIS 161
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + +V E+M GSL L
Sbjct: 43 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMNKGSLLDFL 100
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 101 KGETGKYLRLPQLVDMSAQIASGMAYVERMNY-------VHRDLRAANILV 144
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 58/124 (46%), Gaps = 16/124 (12%)
Query: 218 AVKNV-SRGSKQGKKEYVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDA 275
AVK + S +++ + ++E++ + + +H+N++ LLG C G ++ E+ G+L
Sbjct: 49 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 108
Query: 276 RLFGKKRP-------------LAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
L ++ P + + ++S A Y ++C +HRD + N++
Sbjct: 109 YLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVL 167
Query: 323 LDVD 326
+ D
Sbjct: 168 VTED 171
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V QGK E++ + +L H N+V+L + GE L
Sbjct: 41 LCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 151
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 152 NLLLDPDTAV 161
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 34.3 bits (77), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V QGK E++ + +L H N+V+L + GE L
Sbjct: 41 LCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 151
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 152 NLLLDPDTAV 161
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 218 AVKNVSRGSKQGKKEYV-TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
A+K +++ + +GK+ + E+ + +++H N+V L G L+ + + G L R
Sbjct: 47 AIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDR 106
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM---LDVDVEIWTS 332
+ K +I + A+ YL+ + +VHRD K N++ LD D +I S
Sbjct: 107 IVEKGFYTERDASRLI-FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMIS 161
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 34.3 bits (77), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 60/124 (48%), Gaps = 16/124 (12%)
Query: 218 AVKNV-SRGSKQGKKEYVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDA 275
AVK + S +++ + ++E++ + + +H+N++ LLG C G ++ E+ G+L
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 123
Query: 276 RLFGKKRP-LAWAV------------RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
L ++ P L ++ + ++S A Y ++C +HRD + N++
Sbjct: 124 YLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKC-IHRDLAARNVL 182
Query: 323 LDVD 326
+ D
Sbjct: 183 VTED 186
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 258 RGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEE------WEQCV 311
R E+LLV E+ PNGSL L W ++ + L YL+ E ++ +
Sbjct: 84 RMEYLLVMEYYPNGSLXKYL--SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141
Query: 312 VHRDTKSSNIMLDVD 326
HRD S N+++ D
Sbjct: 142 SHRDLNSRNVLVKND 156
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLG 295
E++ + RH ++++L +F +V E++ G L + R R +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ-Q 119
Query: 296 LATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ +A+ Y + VVHRD K N++LD
Sbjct: 120 ILSAVDYCHRHM---VVHRDLKPENVLLD 145
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLG 295
E++ + RH ++++L +F +V E++ G L + R R +
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQ-Q 119
Query: 296 LATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ +A+ Y + VVHRD K N++LD
Sbjct: 120 ILSAVDYCHRHM---VVHRDLKPENVLLD 145
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 218 AVKNVSRGSKQGKKEYV-TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
A+K +++ + +GK+ + E+ + +++H N+V L G L+ + + G L R
Sbjct: 47 AIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDR 106
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM---LDVDVEIWTS 332
+ K +I + A+ YL+ + +VHRD K N++ LD D +I S
Sbjct: 107 IVEKGFYTERDASRLI-FQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMIS 161
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 231 KEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
++ ++E + Q+ H ++++L G C G LL+ E+ GSL
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
D+A + NV+ + Q + + EV + + RH N++ +G + +V ++ SL
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGSSL 90
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
L + I+ A + YL+ + ++HRD KS+NI L D+ +
Sbjct: 91 YHHLHIIETKFEMIKLIDIARQTAQGMDYLHA---KSIIHRDLKSNNIFLHEDLTV 143
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 231 KEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
++ ++E + Q+ H ++++L G C G LL+ E+ GSL
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 34.3 bits (77), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 231 KEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
++ ++E + Q+ H ++++L G C G LL+ E+ GSL
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSL 113
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + ++RH LVQL + +V E+M GSL L
Sbjct: 46 AIKTLKPGT-MSPEAFLQEAQVMKKIRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL 103
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 104 KGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 147
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 30/135 (22%)
Query: 212 DLDMAAAVKNVSRGSKQGKKE-YVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMP 269
D M AVK + + ++E ++E+K +S L H N+V LLG C G L++ E+
Sbjct: 51 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 110
Query: 270 NGSL--------DARLFGKKRP-------------LAWAVRYMISLGLATALLYLYEEWE 308
G L D+ + K P + Y ++ G+A + +
Sbjct: 111 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA------FLASK 164
Query: 309 QCVVHRDTKSSNIML 323
C +HRD + NI+L
Sbjct: 165 NC-IHRDLAARNILL 178
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 10/96 (10%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMP---NGSLDARLFGKKRPLAWAVRY 290
+ E+ + +L H N+V L+ H LV+EFM LD G + Y
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLY 126
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ G+A + ++HRD K N++++ D
Sbjct: 127 QLLRGVAHC-------HQHRILHRDLKPQNLLINSD 155
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 52/110 (47%), Gaps = 13/110 (11%)
Query: 218 AVKNVSRGSKQGKKEYV-TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
AVK + + + +GK+ + E+ + +++H N+V L LV + + G L R
Sbjct: 51 AVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDR 110
Query: 277 LFGK----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+ K ++ + +R ++ A+ YL+ +VHRD K N++
Sbjct: 111 IVEKGFYTEKDASTLIRQVLD-----AVYYLH---RMGIVHRDLKPENLL 152
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 7/117 (5%)
Query: 217 AAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-DA 275
AVK + +Q ++ EV + H N+V + E +V EF+ G+L D
Sbjct: 73 VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDI 132
Query: 276 RLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEIWTS 332
+ A + L + AL YL+ Q V+HRD KS +I+L D I S
Sbjct: 133 VTHTRMNEEQIAT---VCLSVLRALSYLH---NQGVIHRDIKSDSILLTSDGRIKLS 183
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 12/114 (10%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
+ AA + N + S + ++ E + L+H N+V+L + G LV++ + G L
Sbjct: 31 EYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL 90
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQC----VVHRDTKSSNIML 323
+ ++ Y + + + E C +VHRD K N++L
Sbjct: 91 FEDIVARE--------YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLL 136
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 215 MAAAVKNVSRGSKQGKKE-YVTEVKTISQLRHRNLVQLLGC-CHDRGEFLLVYEFMPNGS 272
+ A+K++SR ++ + E ++ E + L H N++ L+G G ++ +M +G
Sbjct: 50 IQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGD 109
Query: 273 LDARLFGKKRPLAWAVRYMISLGLATA--LLYLYEEWEQCVVHRDTKSSNIMLD 324
L + +R V+ +IS GL A + YL E Q VHRD + N MLD
Sbjct: 110 LLQFIRSPQR--NPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLD 158
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V QGK E++ + +L H N+V+L + GE L
Sbjct: 41 LCDSGELVAIKKVL----QGKAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 97 VLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 151
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 152 NLLLDPDTAV 161
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 10/96 (10%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMP---NGSLDARLFGKKRPLAWAVRY 290
+ E+ + +L H N+V L+ H LV+EFM LD G + Y
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLY 126
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ G+A + ++HRD K N++++ D
Sbjct: 127 QLLRGVAHC-------HQHRILHRDLKPQNLLINSD 155
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 12/114 (10%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
+ AA + N + S + ++ E + L+H N+V+L + G LV++ + G L
Sbjct: 31 EYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL 90
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQC----VVHRDTKSSNIML 323
+ ++ Y + + + E C +VHRD K N++L
Sbjct: 91 FEDIVARE--------YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLL 136
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + +V E+M GSL L
Sbjct: 46 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGSLLDFL 103
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD ++NI++
Sbjct: 104 KGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLAAANILV 147
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 3/111 (2%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
++A + ++ R ++ K + EV Q RH N+V +G C ++ +L
Sbjct: 57 EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTL 116
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ + K L I+ + + YL+ + ++H+D KS N+ D
Sbjct: 117 YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYD 164
>pdb|2LAL|A Chain A, Crystal Structure Determination And Refinement At 2.3
Angstroms Resolution Of The Lentil Lectin
pdb|2LAL|C Chain C, Crystal Structure Determination And Refinement At 2.3
Angstroms Resolution Of The Lentil Lectin
pdb|1LEM|A Chain A, The Monosaccharide Binding Site Of Lentil Lectin: An X-Ray
And Molecular Modelling Study
pdb|1LEN|A Chain A, Refinement Of Two Crystal Forms Of Lentil Lectin At 1.8
Angstroms Resolution
pdb|1LEN|C Chain C, Refinement Of Two Crystal Forms Of Lentil Lectin At 1.8
Angstroms Resolution
pdb|1LES|A Chain A, Lentil Lectin Complexed With Sucrose
pdb|1LES|C Chain C, Lentil Lectin Complexed With Sucrose
Length = 181
Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 64/166 (38%), Gaps = 55/166 (33%)
Query: 1 KKILYQGDAISSVGAIELTK--------------------NNEYLTDFSTKFSFQIDTLG 40
+ +++QGD ++ G + LTK + + +F T F+F ID
Sbjct: 16 QNLIFQGDGYTTKGKLTLTKAVKSTVGRALYSTPIHIWDRDTGNVANFVTSFTFVIDAPS 75
Query: 41 RPTYGHGLVFFLATVGLQIPLNSAGGILGLLNT------------------TASFSSTN- 81
G FF+A V + + GG LG+ N+ A++ +N
Sbjct: 76 SYNVADGFTFFIAPVDTK--PQTGGGYLGVFNSKEYDKTSQTVAVEFDTFYNAAWDPSNK 133
Query: 82 --HIA------------SEDFHRQDTADVQIAYNSTTKNLSVSWTY 113
HI S + + A+V IA+N+ T L+V+ TY
Sbjct: 134 ERHIGIDVNSIKSVNTKSWNLQNGERANVVIAFNAATNVLTVTLTY 179
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 30/135 (22%)
Query: 212 DLDMAAAVKNVSRGSKQGKKE-YVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMP 269
D M AVK + + ++E ++E+K +S L H N+V LLG C G L++ E+
Sbjct: 74 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 133
Query: 270 NGSL--------DARLFGKKRP-------------LAWAVRYMISLGLATALLYLYEEWE 308
G L D+ + K P + Y ++ G+A + +
Sbjct: 134 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA------FLASK 187
Query: 309 QCVVHRDTKSSNIML 323
C +HRD + NI+L
Sbjct: 188 NC-IHRDLAARNILL 201
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + +V E+M G L L
Sbjct: 46 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVMEYMSKGCLLDFL 103
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 104 KGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 147
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLR-HRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
AVK + + + EV+ + Q + HRN+++L+ + F LV+E M GS+ +
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSH 101
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ K+R ++ +A+AL +L+ + + HRD K NI+ +
Sbjct: 102 IH-KRRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCE 145
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 24/106 (22%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMP----------NGSLDARLFGKKRP 283
+ E+ + +L+H+N+V+L H + LV+EF NG LD +
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK---- 104
Query: 284 LAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
++ + + LG + + V+HRD K N++++ + E+
Sbjct: 105 -SFLFQLLKGLGFCHS---------RNVLHRDLKPQNLLINRNGEL 140
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 30/135 (22%)
Query: 212 DLDMAAAVKNVSRGSKQGKKE-YVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMP 269
D M AVK + + ++E ++E+K +S L H N+V LLG C G L++ E+
Sbjct: 67 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 126
Query: 270 NGSL--------DARLFGKKRP-------------LAWAVRYMISLGLATALLYLYEEWE 308
G L D+ + K P + Y ++ G+A + +
Sbjct: 127 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA------FLASK 180
Query: 309 QCVVHRDTKSSNIML 323
C +HRD + NI+L
Sbjct: 181 NC-IHRDLAARNILL 194
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%), Gaps = 24/106 (22%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMP----------NGSLDARLFGKKRP 283
+ E+ + +L+H+N+V+L H + LV+EF NG LD +
Sbjct: 49 LREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVK---- 104
Query: 284 LAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
++ + + LG + + V+HRD K N++++ + E+
Sbjct: 105 -SFLFQLLKGLGFCHS---------RNVLHRDLKPQNLLINRNGEL 140
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 30/135 (22%)
Query: 212 DLDMAAAVKNVSRGSKQGKKE-YVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMP 269
D M AVK + + ++E ++E+K +S L H N+V LLG C G L++ E+
Sbjct: 69 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 128
Query: 270 NGSL--------DARLFGKKRP-------------LAWAVRYMISLGLATALLYLYEEWE 308
G L D+ + K P + Y ++ G+A + +
Sbjct: 129 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA------FLASK 182
Query: 309 QCVVHRDTKSSNIML 323
C +HRD + NI+L
Sbjct: 183 NC-IHRDLAARNILL 196
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 56/133 (42%), Gaps = 4/133 (3%)
Query: 191 FYRDLASATSNFPENKMGYLIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQ 250
Y D+ + + + AA + N + S + ++ E + L+H N+V+
Sbjct: 8 LYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVR 67
Query: 251 LLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQC 310
L + G LV++ + G L + ++ + I L A+L+ + +
Sbjct: 68 LHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQIL-EAVLHCH---QMG 123
Query: 311 VVHRDTKSSNIML 323
VVHRD K N++L
Sbjct: 124 VVHRDLKPENLLL 136
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLR-HRNLVQLLGCCHDRGEFLLVYEFMPNGSLDAR 276
AVK + + + EV+ + Q + HRN+++L+ + F LV+E M GS+ +
Sbjct: 42 AVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSILSH 101
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ K+R ++ +A+AL +L+ + + HRD K NI+ +
Sbjct: 102 IH-KRRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCE 145
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 30/135 (22%)
Query: 212 DLDMAAAVKNVSRGSKQGKKE-YVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMP 269
D M AVK + + ++E ++E+K +S L H N+V LLG C G L++ E+
Sbjct: 74 DAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCC 133
Query: 270 NGSL--------DARLFGKKRP-------------LAWAVRYMISLGLATALLYLYEEWE 308
G L D+ + K P + Y ++ G+A + +
Sbjct: 134 YGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA------FLASK 187
Query: 309 QCVVHRDTKSSNIML 323
C +HRD + NI+L
Sbjct: 188 NC-IHRDLAARNILL 201
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
A+K + G+ + ++ E + + +LRH LVQL + +V E+M G L L
Sbjct: 46 AIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE-PIYIVTEYMSKGCLLDFL 103
Query: 278 FGK-----KRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
G+ + P + I+ G+A Y VHRD +++NI++
Sbjct: 104 KGEMGKYLRLPQLVDMAAQIASGMAYVERMNY-------VHRDLRAANILV 147
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 79 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 134
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 135 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 189
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 190 NLLLDPDTAV 199
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 120 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 175
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 176 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 230
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 231 NLLLDPDTAV 240
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 51/110 (46%), Gaps = 4/110 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
+ AA + N + S + ++ E + L+H N+V+L + G L+++ + G L
Sbjct: 38 EYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL 97
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ ++ + I + A+L+ + + VVHR+ K N++L
Sbjct: 98 FEDIVAREYYSEADASHCIQ-QILEAVLHCH---QMGVVHRNLKPENLLL 143
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 75 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 131 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 185
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 186 NLLLDPDTAV 195
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 245 HRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLY 304
H N++QL F LV++ M G L L +K L+ I L + L+
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALH 128
Query: 305 EEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +VHRD K NI+LD D+ I
Sbjct: 129 K---LNIVHRDLKPENILLDDDMNI 150
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 69 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 124
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 125 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 179
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 180 NLLLDPDTAV 189
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 232 EYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYM 291
+++ EV + L HRNL++L G +V E P GSL RL +
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR 119
Query: 292 ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
++ +A + YL + +HRD + N++L
Sbjct: 120 YAVQVAEGMGYLE---SKRFIHRDLAARNLLL 148
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 46 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 101
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 102 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 156
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 157 NLLLDPDTAV 166
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 245 HRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLY 304
H N++QL F LV++ M G L L +K L+ I L + L+
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALH 141
Query: 305 EEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +VHRD K NI+LD D+ I
Sbjct: 142 K---LNIVHRDLKPENILLDDDMNI 163
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 77 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 132
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 133 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 187
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 188 NLLLDPDTAV 197
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 75 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 131 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 185
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 186 NLLLDPDTAV 195
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 245 HRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLY 304
H N++QL F LV++ M G L L +K L+ I L + L+
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-TEKVTLSEKETRKIMRALLEVICALH 141
Query: 305 EEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +VHRD K NI+LD D+ I
Sbjct: 142 K---LNIVHRDLKPENILLDDDMNI 163
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 234 VTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMI 292
V+E++ + + +H+N++ LLG C G ++ + G+L L +RP Y I
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRA-RRPPGMEYSYDI 146
Query: 293 ----------------SLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ LA + YL Q +HRD + N+++
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 16/106 (15%)
Query: 230 KKEYVTEVKTI----------SQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFG 279
KKE V +K + S + H ++++ G D + ++ +++ G L + L
Sbjct: 40 KKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK 99
Query: 280 KKR-PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+R P A Y + LA L+ + +++RD K NI+LD
Sbjct: 100 SQRFPNPVAKFYAAEVCLALEYLH-----SKDIIYRDLKPENILLD 140
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 41 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 151
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 152 NLLLDPDTAV 161
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 54 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 109
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 110 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 164
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 165 NLLLDPDTAV 174
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 53 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 108
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 109 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 163
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 164 NLLLDPDTAV 173
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 232 EYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYM 291
+++ EV + L HRNL++L G +V E P GSL RL +
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR 125
Query: 292 ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
++ +A + YL + +HRD + N++L
Sbjct: 126 YAVQVAEGMGYLE---SKRFIHRDLAARNLLL 154
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 232 EYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYM 291
+++ EV + L HRNL++L G +V E P GSL RL +
Sbjct: 67 DFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR 125
Query: 292 ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
++ +A + YL + +HRD + N++L
Sbjct: 126 YAVQVAEGMGYLE---SKRFIHRDLAARNLLL 154
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 41 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 151
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 152 NLLLDPDTAV 161
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 41 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 96
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 151
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 152 NLLLDPDTAV 161
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 4/89 (4%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLG 295
E++ + L H LV L D + +V + + G L L V+ I
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFIC-E 123
Query: 296 LATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L AL YL Q ++HRD K NI+LD
Sbjct: 124 LVMALDYLQN---QRIIHRDMKPDNILLD 149
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 49 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 104
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 105 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 159
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 160 NLLLDPDTAV 169
>pdb|1LUL|A Chain A, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|B Chain B, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|C Chain C, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|D Chain D, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|E Chain E, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1LUL|F Chain F, Db58, A Legume Lectin From Dolichos Biflorus
pdb|1G7Y|A Chain A, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|B Chain B, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|C Chain C, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|D Chain D, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|E Chain E, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
pdb|1G7Y|F Chain F, The Crystal Structure Of The 58kd Vegetative Lectin From
The Tropical Legume Dolichos Biflorus
Length = 253
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 67/164 (40%), Gaps = 44/164 (26%)
Query: 20 KNNEYLTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTA---- 75
K+ + ++T F+ I + + G+ F L VG + NS G LG+ ++
Sbjct: 59 KSTGAVASWATSFTANIFAPNKSSSADGIAFALVPVGSEPKSNS--GFLGVFDSDVYDNS 116
Query: 76 ---------SFSSTN------HI------------ASEDFHRQDTADVQIAYNSTTKNLS 108
+FS+T+ HI AS A++ I YN+ T L
Sbjct: 117 AQTVAVEFDTFSNTDWDPTSRHIGIDVNSIKSIRTASWGLANGQNAEILITYNAATSLLV 176
Query: 109 VSWTYRLISDPRENTSLFYII----DLMKVLSQWVTIGFSAATG 148
S + P TS YI+ D+ L ++V+IGFSA TG
Sbjct: 177 ASLVH-----PSRRTS--YIVSERVDITNELPEYVSIGFSATTG 213
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 14/101 (13%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-----DARLFGKKRPLAWAV 288
VTE + + RH L L V E+ G L R+F ++R +
Sbjct: 56 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 115
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +AL YL+ + VV+RD K N+MLD D I
Sbjct: 116 E------IVSALEYLHS---RDVVYRDIKLENLMLDKDGHI 147
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 60 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 115
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 116 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 170
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 171 NLLLDPDTAV 180
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 42 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 97
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 98 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 152
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 153 NLLLDPDTAV 162
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 41 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNL 96
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 97 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 151
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 152 NLLLDPDTAV 161
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 45 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 100
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 101 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 155
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 156 NLLLDPDTAV 165
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 232 EYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYM 291
+++ EV + L HRNL++L G +V E P GSL RL +
Sbjct: 61 DFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR 119
Query: 292 ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
++ +A + YL + +HRD + N++L
Sbjct: 120 YAVQVAEGMGYLE---SKRFIHRDLAARNLLL 148
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 210 LIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE------FLL 263
L D A+K V Q K+ E++ + +L H N+V+L + GE L
Sbjct: 53 LCDSGELVAIKKVL----QDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 108
Query: 264 VYEFMPNGSLD-ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSS 319
V +++P AR + + + P+ + YM L + A ++ + + HRD K
Sbjct: 109 VLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG-----ICHRDIKPQ 163
Query: 320 NIMLDVDVEI 329
N++LD D +
Sbjct: 164 NLLLDPDTAV 173
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 14/101 (13%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-----DARLFGKKRPLAWAV 288
VTE + + RH L L V E+ G L R+F ++R +
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 112
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +AL YL+ + VV+RD K N+MLD D I
Sbjct: 113 E------IVSALEYLHS---RDVVYRDIKLENLMLDKDGHI 144
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 232 EYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYM 291
+++ EV + L HRNL++L G +V E P GSL RL +
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR 115
Query: 292 ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
++ +A + YL + +HRD + N++L
Sbjct: 116 YAVQVAEGMGYLE---SKRFIHRDLAARNLLL 144
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 130
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 131 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 171
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 14/101 (13%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-----DARLFGKKRPLAWAV 288
VTE + + RH L L V E+ G L R+F ++R +
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 112
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +AL YL+ + VV+RD K N+MLD D I
Sbjct: 113 E------IVSALEYLHS---RDVVYRDIKLENLMLDKDGHI 144
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 232 EYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYM 291
+++ EV + L HRNL++L G +V E P GSL RL +
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR 115
Query: 292 ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
++ +A + YL + +HRD + N++L
Sbjct: 116 YAVQVAEGMGYLE---SKRFIHRDLAARNLLL 144
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 14/101 (13%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-----DARLFGKKRPLAWAV 288
VTE + + RH L L V E+ G L R+F ++R +
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 112
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +AL YL+ + VV+RD K N+MLD D I
Sbjct: 113 E------IVSALEYLHS---RDVVYRDIKLENLMLDKDGHI 144
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 14/101 (13%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-----DARLFGKKRPLAWAV 288
VTE + + RH L L V E+ G L R+F ++R +
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 112
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +AL YL+ + VV+RD K N+MLD D I
Sbjct: 113 E------IVSALEYLHS---RDVVYRDIKLENLMLDKDGHI 144
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 14/101 (13%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-----DARLFGKKRPLAWAV 288
VTE + + RH L L V E+ G L R+F ++R +
Sbjct: 58 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 117
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +AL YL+ + VV+RD K N+MLD D I
Sbjct: 118 E------IVSALEYLHS---RDVVYRDIKLENLMLDKDGHI 149
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 232 EYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYM 291
+++ EV + L HRNL++L G +V E P GSL RL +
Sbjct: 57 DFIREVNAMHSLDHRNLIRLYGVVLT-PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR 115
Query: 292 ISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
++ +A + YL + +HRD + N++L
Sbjct: 116 YAVQVAEGMGYLE---SKRFIHRDLAARNLLL 144
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 70 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 128
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 129 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 169
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 234 VTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMI 292
V+E++ + + +H+N++ LLG C G ++ + G+L L +RP Y I
Sbjct: 88 VSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRA-RRPPGMEYSYDI 146
Query: 293 ----------------SLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ LA + YL Q +HRD + N+++
Sbjct: 147 NRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 14/101 (13%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-----DARLFGKKRPLAWAV 288
VTE + + RH L L V E+ G L R+F ++R +
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGA 112
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +AL YL+ + VV+RD K N+MLD D I
Sbjct: 113 E------IVSALEYLHS---RDVVYRDIKLENLMLDKDGHI 144
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 75 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 133
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 134 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 174
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 130
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 131 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 171
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-DAR 276
AVK + +Q ++ EV + +H N+V++ E +V EF+ G+L D
Sbjct: 49 AVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV 108
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ A + L + AL L+ Q V+HRD KS +I+L D
Sbjct: 109 THTRMNEEQIAA---VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHD 152
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 70 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 128
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 129 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 169
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 70 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 128
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 129 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 169
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 70 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 128
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 129 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 169
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 130
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 131 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 171
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-DAR 276
AVK + +Q ++ EV + +H N+V++ E +V EF+ G+L D
Sbjct: 53 AVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV 112
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ A + L + AL L+ Q V+HRD KS +I+L D
Sbjct: 113 THTRMNEEQIAA---VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHD 156
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 73 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 131
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 132 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 172
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 73 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 131
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 132 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 172
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 130
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 131 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 171
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 130
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 131 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 171
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 32.3 bits (72), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 69 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 127
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 128 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 168
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 245 HRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLY 304
H LV L C V E++ G L + ++R L S ++ AL YL+
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLH 170
Query: 305 EEWEQCVVHRDTKSSNIMLDVDVEI 329
E + +++RD K N++LD + I
Sbjct: 171 E---RGIIYRDLKLDNVLLDSEGHI 192
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 72 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCL-LKYIRKIGSFD 130
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 131 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 171
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 32.3 bits (72), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 69 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 127
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 128 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 168
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-----DARLFGKKRPLAWAV 288
+TE + + RH L L V E+ G L R+F + R +
Sbjct: 58 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 117
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +AL YL+ E + VV+RD K N+MLD D I
Sbjct: 118 E------IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHI 150
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 245 HRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLY 304
H LV L C V E++ G L + ++R L S ++ AL YL+
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLH 123
Query: 305 EEWEQCVVHRDTKSSNIMLDVDVEI 329
E + +++RD K N++LD + I
Sbjct: 124 E---RGIIYRDLKLDNVLLDSEGHI 145
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 230 KKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVR 289
KK + E++ + QL+H NLV LL + LV+E+ + L L +R + +
Sbjct: 46 KKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVL-HELDRYQRGVPEHLV 104
Query: 290 YMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
I+ A+ + ++ C +HRD K NI++
Sbjct: 105 KSITWQTLQAVNFCHK--HNC-IHRDVKPENILI 135
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 54 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 112
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 113 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 153
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-----DARLFGKKRPLAWAV 288
+TE + + RH L L V E+ G L R+F + R +
Sbjct: 57 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 116
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +AL YL+ E + VV+RD K N+MLD D I
Sbjct: 117 E------IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHI 149
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-----DARLFGKKRPLAWAV 288
+TE + + RH L L V E+ G L R+F + R +
Sbjct: 56 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 115
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +AL YL+ E + VV+RD K N+MLD D I
Sbjct: 116 E------IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHI 148
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-DAR 276
AVK + +Q ++ EV + +H N+V++ E +V EF+ G+L D
Sbjct: 58 AVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV 117
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ A + L + AL L+ Q V+HRD KS +I+L D
Sbjct: 118 THTRMNEEQIAA---VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHD 161
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 50/110 (45%), Gaps = 7/110 (6%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-DAR 276
AVK + +Q ++ EV + +H N+V++ E +V EF+ G+L D
Sbjct: 60 AVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV 119
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ A + L + AL L+ Q V+HRD KS +I+L D
Sbjct: 120 THTRMNEEQIAA---VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHD 163
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 32.0 bits (71), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 245 HRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLY 304
H LV L C V E++ G L + ++R L S ++ AL YL+
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLH 127
Query: 305 EEWEQCVVHRDTKSSNIMLDVDVEI 329
E + +++RD K N++LD + I
Sbjct: 128 E---RGIIYRDLKLDNVLLDSEGHI 149
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Query: 245 HRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLY 304
H LV L C V E++ G L + ++R L S ++ AL YL+
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHM-QRQRKLPEEHARFYSAEISLALNYLH 138
Query: 305 EEWEQCVVHRDTKSSNIMLDVDVEI 329
E + +++RD K N++LD + I
Sbjct: 139 E---RGIIYRDLKLDNVLLDSEGHI 160
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 55/130 (42%), Gaps = 27/130 (20%)
Query: 218 AVKNV-SRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD-- 274
AVK + S + ++ E +++ + N+V+LLG C L++E+M G L+
Sbjct: 81 AVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEF 140
Query: 275 --------------------ARLFGK-KRPLAWAVRYMISLGLATALLYLYEEWEQCVVH 313
AR+ PL+ A + I+ +A + YL E+ VH
Sbjct: 141 LRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVH 197
Query: 314 RDTKSSNIML 323
RD + N ++
Sbjct: 198 RDLATRNCLV 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 47 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 105
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 106 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 146
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 32.0 bits (71), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-----DARLFGKKRPLAWAV 288
+TE + + RH L L V E+ G L R+F + R +
Sbjct: 196 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 255
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +AL YL+ E + VV+RD K N+MLD D I
Sbjct: 256 E------IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHI 288
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 32.0 bits (71), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 49 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 107
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 108 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 148
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQL-RHRNLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 120
Query: 275 ARLFGKKRP-LAWAVRYMISLGLATALLYLYEEWE-------QCVVHRDTKSSNIML 323
L K+ + + Y L L + Y ++ + + +HRD + NI+L
Sbjct: 121 TYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL 177
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 48 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 106
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 107 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 147
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 32.0 bits (71), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 13/101 (12%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-----DARLFGKKRPLAWAV 288
+TE + + RH L L V E+ G L R+F + R +
Sbjct: 199 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGA 258
Query: 289 RYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ +AL YL+ E + VV+RD K N+MLD D I
Sbjct: 259 E------IVSALDYLHSE--KNVVYRDLKLENLMLDKDGHI 291
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 32.0 bits (71), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 227 KQGKKEYVT-EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLA 285
K+ K YVT E +S+L H V+L D + + NG L + K
Sbjct: 50 KENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL-LKYIRKIGSFD 108
Query: 286 WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ + +AL YL+ + ++HRD K NI+L+ D+ I
Sbjct: 109 ETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHI 149
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGE--FLLVYEFMPNGSLDARLFGKKRPLAWAVRYMIS 293
E+ + +L H N+V+L+ D E +V+E + G + +PL+
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPV--MEVPTLKPLSEDQARFYF 143
Query: 294 LGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
L + YL+ Q ++HRD K SN+++ D I
Sbjct: 144 QDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHI 176
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 31.6 bits (70), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQL-RHRNLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 120
Query: 275 ARLFGKKRP-LAWAVRYMISLGLATALLYLYEEWE-------QCVVHRDTKSSNIML 323
L K+ + + Y L L + Y ++ + + +HRD + NI+L
Sbjct: 121 TYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILL 177
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRP-----LAWAVRY 290
E L+H ++V+LL G +V+EFM L + + A A Y
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
M + AL Y + + ++HRD K N++L
Sbjct: 136 MRQ--ILEALRYCH---DNNIIHRDVKPENVLL 163
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 31.6 bits (70), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 10/141 (7%)
Query: 186 VPRRFFYRDLASATSNFPENKMGYLIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRH 245
+PR F E MGY + AVK + G+ + ++ E + L+H
Sbjct: 9 IPRESIKLVKKLGAGQFGEVWMGYYNN-STKVAVKTLKPGT-MSVQAFLEEANLMKTLQH 66
Query: 246 RNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLF---GKKRPLAWAVRYMISLGLATALLY 302
LV+L ++ EFM GSL L G K L + + S +A + Y
Sbjct: 67 DKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDF--SAQIAEGMAY 124
Query: 303 LYEEWEQCVVHRDTKSSNIML 323
+ + +HRD +++N+++
Sbjct: 125 IE---RKNYIHRDLRAANVLV 142
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 7/116 (6%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL-DAR 276
AVK + +Q ++ EV + +H N+V++ E +V EF+ G+L D
Sbjct: 103 AVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV 162
Query: 277 LFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEIWTS 332
+ A + L + AL L+ Q V+HRD KS +I+L D + S
Sbjct: 163 THTRMNEEQIAA---VCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLS 212
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 5/109 (4%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
AVK + +Q ++ EV + +H N+V++ E +V EF+ G+L +
Sbjct: 180 AVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIV 239
Query: 278 FGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ + + L + AL L+ Q V+HRD KS +I+L D
Sbjct: 240 THTR--MNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHD 283
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 31.6 bits (70), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGK----KRPLAWAVRYM 291
E+ + +++H N+V L + LV + + G L R+ + ++ + ++ +
Sbjct: 56 EIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQV 115
Query: 292 ISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
+S A+ YL+ E +VHRD K N++
Sbjct: 116 LS-----AVKYLH---ENGIVHRDLKPENLL 138
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQLRHR-NLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 63 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 122
Query: 275 ARLFGKKR---PLAWAVRYMISLGLATALLYLYEEWE-------QCVVHRDTKSSNIML 323
L K+ P Y L L + Y ++ + + +HRD + NI+L
Sbjct: 123 TYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL 181
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 16/121 (13%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQL-RHRNLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 62 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 121
Query: 275 ARLFGKKRPLA------------WAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
L K+ + ++I A + +C +HRD + NI+
Sbjct: 122 TYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-IHRDLAARNIL 180
Query: 323 L 323
L
Sbjct: 181 L 181
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 31.2 bits (69), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 226 SKQG--KKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRP 283
S++G ++E EV + ++RH N++ L ++ + +L+ E + G L +K
Sbjct: 53 SRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL-FDFLAEKES 111
Query: 284 LAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L + + YL+ + + H D K NIML
Sbjct: 112 LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIML 148
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 30.8 bits (68), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 226 SKQG--KKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRP 283
S++G ++E EV + ++RH N++ L ++ + +L+ E + G L +K
Sbjct: 67 SRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL-FDFLAEKES 125
Query: 284 LAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L + + YL+ + + H D K NIML
Sbjct: 126 LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIML 162
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 30.8 bits (68), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 20/129 (15%)
Query: 212 DLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQL--------------LGCCHD 257
D D A+K + Q K + E+K I +L H N+V++ +G +
Sbjct: 34 DCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTE 93
Query: 258 RGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTK 317
+V E+M D ++ PL + L L Y++ V+HRD K
Sbjct: 94 LNSVYIVQEYM---ETDLANVLEQGPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLK 147
Query: 318 SSNIMLDVD 326
+N+ ++ +
Sbjct: 148 PANLFINTE 156
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 30.8 bits (68), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQLRHR-NLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 98 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 157
Query: 275 ARLFGKKR---PLAWA----------VRYMISLGLATALLYLYEEWEQCVVHRDTKSSNI 321
L K+ P A + ++I A + +C +HRD + NI
Sbjct: 158 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-IHRDLAARNI 216
Query: 322 ML 323
+L
Sbjct: 217 LL 218
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 30.8 bits (68), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLG 295
E + ++ H +V+L G+ L+ +F+ G L RL + V++ ++
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 134
Query: 296 LATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
LA AL +L+ +++RD K NI+LD + I
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHI 165
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 226 SKQG--KKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRP 283
S++G ++E EV + ++RH N++ L ++ + +L+ E + G L +K
Sbjct: 46 SRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGEL-FDFLAEKES 104
Query: 284 LAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L + + YL+ + + H D K NIML
Sbjct: 105 LTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIML 141
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQLRHR-NLVQLLGCCHDR-GEFLLVYEFMPNGSLD 274
AVK + G+ + K +TE+K ++ + H N+V LLG C + G +++ E+ G+L
Sbjct: 61 AVKMLKEGATASEYKALMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLS 120
Query: 275 ARLFGKK 281
L K+
Sbjct: 121 NYLKSKR 127
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQL-RHRNLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 120
Query: 275 ARLFGKKR---PLAWA----------VRYMISLGLATALLYLYEEWEQCVVHRDTKSSNI 321
L K+ P A + ++I A + +C +HRD + NI
Sbjct: 121 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-IHRDLAARNI 179
Query: 322 ML 323
+L
Sbjct: 180 LL 181
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQL-RHRNLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 120
Query: 275 ARLFGKKR---PLAWA----------VRYMISLGLATALLYLYEEWEQCVVHRDTKSSNI 321
L K+ P A + ++I A + +C +HRD + NI
Sbjct: 121 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-IHRDLAARNI 179
Query: 322 ML 323
+L
Sbjct: 180 LL 181
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQLRHR-NLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 63 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 122
Query: 275 ARLFGKKR---PLAWA----------VRYMISLGLATALLYLYEEWEQCVVHRDTKSSNI 321
L K+ P A + ++I A + +C +HRD + NI
Sbjct: 123 TYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-IHRDLAARNI 181
Query: 322 ML 323
+L
Sbjct: 182 LL 183
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQL-RHRNLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 120
Query: 275 ARLFGKKR---PLAWA----------VRYMISLGLATALLYLYEEWEQCVVHRDTKSSNI 321
L K+ P A + ++I A + +C +HRD + NI
Sbjct: 121 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-IHRDLAARNI 179
Query: 322 ML 323
+L
Sbjct: 180 LL 181
>pdb|1OFS|A Chain A, Pea Lectin-sucrose Complex
pdb|1OFS|C Chain C, Pea Lectin-sucrose Complex
Length = 187
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 35/122 (28%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSSTNHIA 84
+ +F T F+F I+ G FF+A V + + GG LG+ N+ +T +A
Sbjct: 60 VANFVTSFTFVINAPNSYNVADGFTFFIAPVDTK--PQTGGGYLGVFNSAEYDKTTQTVA 117
Query: 85 SE--------------DFH-------------------RQDTADVQIAYNSTTKNLSVSW 111
E D H + A+V IA+N+ T L+VS
Sbjct: 118 VEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSWKLQNGEEANVVIAFNAATNVLTVSL 177
Query: 112 TY 113
TY
Sbjct: 178 TY 179
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQL-RHRNLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 52 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 111
Query: 275 ARLFGKKR---PLAWA----------VRYMISLGLATALLYLYEEWEQCVVHRDTKSSNI 321
L K+ P A + ++I A + +C +HRD + NI
Sbjct: 112 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-IHRDLAARNI 170
Query: 322 ML 323
+L
Sbjct: 171 LL 172
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 213 LDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
L+ AA + N + S + ++ E + +L+H N+V+L + LV++ + G
Sbjct: 32 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 91
Query: 273 L----DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L AR F + + ++ ++ ++ Y + +VHR+ K N++L
Sbjct: 92 LFEDIVAREFYSEADASHCIQQILE-----SIAYCH---SNGIVHRNLKPENLLL 138
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
+M AVK + + SK+ E + + Q H N++ L D LV E M G L
Sbjct: 52 NMEYAVKVIDK-SKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGEL 108
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
++ +K +++ + + YL+ Q VVHRD K SNI+
Sbjct: 109 LDKILRQKFFSEREASFVLHT-IGKTVEYLHS---QGVVHRDLKPSNIL 153
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 213 LDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
L+ AA + N + S + ++ E + +L+H N+V+L + LV++ + G
Sbjct: 55 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 114
Query: 273 L----DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L AR F + + ++ ++ ++ Y + +VHR+ K N++L
Sbjct: 115 LFEDIVAREFYSEADASHCIQQILE-----SIAYCH---SNGIVHRNLKPENLLL 161
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLG 295
E + ++ H +V+L G+ L+ +F+ G L RL + V++ ++
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 135
Query: 296 LATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
LA AL +L+ +++RD K NI+LD + I
Sbjct: 136 LALALDHLHS---LGIIYRDLKPENILLDEEGHI 166
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLG 295
E + ++ H +V+L G+ L+ +F+ G L RL + V++ ++
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 134
Query: 296 LATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
LA AL +L+ +++RD K NI+LD + I
Sbjct: 135 LALALDHLHS---LGIIYRDLKPENILLDEEGHI 165
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 214 DMAAAVKNVSRGSKQGKK-EYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
D A+K + ++G + EV + L+H N+V L H LV+E++ +
Sbjct: 27 DNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKD 85
Query: 273 LDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
L L + + L L Y + Q V+HRD K N++++
Sbjct: 86 LKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLIN 134
>pdb|1RIN|A Chain A, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
pdb|1RIN|C Chain C, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
Length = 180
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 35/122 (28%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSSTNHIA 84
+ +F T F+F I+ G FF+A V + + GG LG+ N+ +T +A
Sbjct: 60 VANFVTSFTFVINAPNSYNVADGFTFFIAPVDTK--PQTGGGYLGVFNSAEYDKTTETVA 117
Query: 85 SE--------------DFH-------------------RQDTADVQIAYNSTTKNLSVSW 111
E D H + A+V IA+N+ T L+VS
Sbjct: 118 VEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSWKLQNGEEANVVIAFNAATNVLTVSL 177
Query: 112 TY 113
TY
Sbjct: 178 TY 179
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 213 LDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
L+ AA + N + S + ++ E + +L+H N+V+L + LV++ + G
Sbjct: 32 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 91
Query: 273 L----DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L AR F + + ++ ++ ++ Y + +VHR+ K N++L
Sbjct: 92 LFEDIVAREFYSEADASHCIQQILE-----SIAYCH---SNGIVHRNLKPENLLL 138
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/115 (21%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 213 LDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
L+ AA + N + S + ++ E + +L+H N+V+L + LV++ + G
Sbjct: 31 LEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 90
Query: 273 L----DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L AR F + + ++ ++ ++ Y + +VHR+ K N++L
Sbjct: 91 LFEDIVAREFYSEADASHCIQQILE-----SIAYCH---SNGIVHRNLKPENLLL 137
>pdb|2LTN|A Chain A, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|2LTN|C Chain C, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|1BQP|A Chain A, The Structure Of The Pea Lectin-D-Mannopyranose Complex
pdb|1BQP|C Chain C, The Structure Of The Pea Lectin-D-Mannopyranose Complex
pdb|1HKD|A Chain A, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
pdb|1HKD|C Chain C, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
Length = 181
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 47/122 (38%), Gaps = 35/122 (28%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNTTASFSSTNHIA 84
+ +F T F+F I+ G FF+A V + + GG LG+ N+ +T +A
Sbjct: 60 VANFVTSFTFVINAPNSYNVADGFTFFIAPVDTK--PQTGGGYLGVFNSAEYDKTTQTVA 117
Query: 85 SE--------------DFH-------------------RQDTADVQIAYNSTTKNLSVSW 111
E D H + A+V IA+N+ T L+VS
Sbjct: 118 VEFDTFYNAAWDPSNRDRHIGIDVNSIKSVNTKSWKLQNGEEANVVIAFNAATNVLTVSL 177
Query: 112 TY 113
TY
Sbjct: 178 TY 179
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQL-RHRNLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 52 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLS 111
Query: 275 ARLFGKKR---PLAWA----------VRYMISLGLATALLYLYEEWEQCVVHRDTKSSNI 321
L K+ P A + ++I A + +C +HRD + NI
Sbjct: 112 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-IHRDLAARNI 170
Query: 322 ML 323
+L
Sbjct: 171 LL 172
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQLRHR-NLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 52 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLS 111
Query: 275 ARLFGKKR---PLAWA----------VRYMISLGLATALLYLYEEWEQCVVHRDTKSSNI 321
L K+ P A + ++I A + +C +HRD + NI
Sbjct: 112 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-IHRDLAARNI 170
Query: 322 ML 323
+L
Sbjct: 171 LL 172
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 7/109 (6%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
+M AVK + + SK+ E + + Q H N++ L D LV E M G L
Sbjct: 52 NMEYAVKVIDK-SKRDPSEEIEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGEL 108
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
++ +K +++ + + YL+ Q VVHRD K SNI+
Sbjct: 109 LDKILRQKFFSEREASFVLHT-IGKTVEYLHS---QGVVHRDLKPSNIL 153
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 30.4 bits (67), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 17/122 (13%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQL-RHRNLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 52 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLS 111
Query: 275 ARLFGKKR---PLAWA----------VRYMISLGLATALLYLYEEWEQCVVHRDTKSSNI 321
L K+ P A + ++I A + +C +HRD + NI
Sbjct: 112 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKC-IHRDLAARNI 170
Query: 322 ML 323
+L
Sbjct: 171 LL 172
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 64/168 (38%), Gaps = 32/168 (19%)
Query: 187 PRRFFYR-DLASATSNFPENKMG---------------YLIDLDMAAAVKNVSRGSK--- 227
PR FYR +L P+ G Y L AVK +SR +
Sbjct: 10 PRAGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLI 69
Query: 228 QGKKEYVTEVKTISQLRHRNLVQLLGC------CHDRGEFLLVYEFMPNGSLDARLFGKK 281
++ Y E++ + L+H N++ LL D E LV M D K
Sbjct: 70 HARRTY-RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM---GADLNNIVKS 125
Query: 282 RPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ L+ + L L Y++ ++HRD K SN+ ++ D E+
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSEL 170
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 4/110 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
+ AA + N + S + ++ E + L+H N+V+L + G LV++ + G L
Sbjct: 58 EYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL 117
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
+ ++ + S + L + + +VHRD K N++L
Sbjct: 118 FEDIVARE----YYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLL 163
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 15/113 (13%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQL-RHRNLVQLLGCCHDRGEFLLVYEFMPNGS 272
+M AVK + + K++ E++ + + +H N++ L D +V E M G
Sbjct: 47 NMEFAVKIIDKS----KRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGE 102
Query: 273 LDARLFGKK---RPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIM 322
L ++ +K A AV + I+ + YL+ Q VVHRD K SNI+
Sbjct: 103 LLDKILRQKFFSEREASAVLFTIT----KTVEYLHA---QGVVHRDLKPSNIL 148
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 231 KEYVTEVKTISQLRHRNLV---QLLGCCHDRGEFLLVYEFMPNGSLD-ARLFGKKRPLAW 286
K + E+K + +H N++ +L GEF VY + D ++ +PL
Sbjct: 98 KRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL 157
Query: 287 A-VRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
VRY + L L Y++ V+HRD K SN++++ + E+
Sbjct: 158 EHVRYFL-YQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCEL 197
>pdb|2B7Y|A Chain A, Fava Bean Lectin-Glucose Complex
pdb|2B7Y|C Chain C, Fava Bean Lectin-Glucose Complex
Length = 182
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLN 72
+ DF+T F F ID G FF+A V + + GG LG+ N
Sbjct: 61 VADFTTTFIFVIDAPNGYNVADGFTFFIAPVDTK--PQTGGGYLGVFN 106
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
AVK + RG K + E+ LRH N+V+ +V E+ G L R+
Sbjct: 47 AVKYIERGEKIDEN-VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 105
Query: 278 FGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
R R+ L + + Y + V HRD K N +LD
Sbjct: 106 CNAGRFSEDEARFFFQ-QLISGVSYCHAMQ---VCHRDLKLENTLLD 148
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 226 SKQGKKEYV-TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD---ARLFGKK 281
+Q KKE + E+ + + ++ N+V L E +V E++ GSL +
Sbjct: 56 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 115
Query: 282 RPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+A R + AL +L+ V+HRD KS NI+L +D
Sbjct: 116 GQIAAVCRECLQ-----ALEFLHSNQ---VIHRDIKSDNILLGMD 152
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 226 SKQGKKEYV-TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD---ARLFGKK 281
+Q KKE + E+ + + ++ N+V L E +V E++ GSL +
Sbjct: 56 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 115
Query: 282 RPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+A R + AL +L+ V+HRD KS NI+L +D
Sbjct: 116 GQIAAVCRECLQ-----ALEFLHSNQ---VIHRDIKSDNILLGMD 152
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 232 EYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS-LD------ARLFGKKRPL 284
E + E++ +SQ H N+V + E LV + + GS LD A+ K L
Sbjct: 59 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL 118
Query: 285 AWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ I + L YL++ + +HRD K+ NI+L D
Sbjct: 119 DESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 157
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 11/110 (10%)
Query: 218 AVKNVSRGSKQG---KKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD 274
AVK + RG K K+E + LRH N+V+ +V E+ G L
Sbjct: 48 AVKYIERGEKIAANVKREIINH----RSLRHPNIVRFKEVILTPTHLAIVMEYASGGELF 103
Query: 275 ARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
R+ R R+ L + + Y + V HRD K N +LD
Sbjct: 104 ERICNAGRFSEDEARFFFQ-QLISGVSYCHAMQ---VCHRDLKLENTLLD 149
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 232 EYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGS-LD------ARLFGKKRPL 284
E + E++ +SQ H N+V + E LV + + GS LD A+ K L
Sbjct: 54 ELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVL 113
Query: 285 AWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+ I + L YL++ + +HRD K+ NI+L D
Sbjct: 114 DESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 152
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 9/104 (8%)
Query: 231 KEYVTEVKTISQLRHRNLV---QLLGCCHDRGEFLLVYEFMPNGSLD-ARLFGKKRPLAW 286
K + E+K + +H N++ +L GEF VY + D ++ +PL
Sbjct: 99 KRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL 158
Query: 287 A-VRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
VRY + L L Y++ V+HRD K SN++++ + E+
Sbjct: 159 EHVRYFL-YQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCEL 198
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
AVK + RG K + E+ LRH N+V+ +V E+ G L R+
Sbjct: 48 AVKYIERGEKIDEN-VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 278 FGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
R R+ L + + Y + V HRD K N +LD
Sbjct: 107 CNAGRFSEDEARFFFQ-QLISGVSYCHAMQ---VCHRDLKLENTLLD 149
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 226 SKQGKKEYV-TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD---ARLFGKK 281
+Q KKE + E+ + + ++ N+V L E +V E++ GSL +
Sbjct: 56 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 115
Query: 282 RPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+A R + AL +L+ V+HRD KS NI+L +D
Sbjct: 116 GQIAAVCRECLQ-----ALEFLHSNQ---VIHRDIKSDNILLGMD 152
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
AVK + RG K + E+ LRH N+V+ +V E+ G L R+
Sbjct: 48 AVKYIERGEKIDEN-VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 278 FGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
R R+ L + + Y + V HRD K N +LD
Sbjct: 107 CNAGRFSEDEARFFFQ-QLISGVSYCHAMQ---VCHRDLKLENTLLD 149
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 226 SKQGKKEYV-TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD---ARLFGKK 281
+Q KKE + E+ + + ++ N+V L E +V E++ GSL +
Sbjct: 57 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 116
Query: 282 RPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+A R + AL +L+ V+HRD KS NI+L +D
Sbjct: 117 GQIAAVCRECLQ-----ALEFLHSNQ---VIHRDIKSDNILLGMD 153
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 5/107 (4%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL 277
AVK + RG K + E+ LRH N+V+ +V E+ G L R+
Sbjct: 48 AVKYIERGEKIDEN-VKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERI 106
Query: 278 FGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
R R+ L + + Y + V HRD K N +LD
Sbjct: 107 CNAGRFSEDEARFFFQ-QLISGVSYAHA---MQVAHRDLKLENTLLD 149
>pdb|1LOF|C Chain C, X-Ray Structure Of A Biantennary Octasaccharide-Lectin
Complex At 2.3 Angstroms Resolution
Length = 181
Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNT 73
+ +F T F+F ID G FF+A V + + GG LG+ N+
Sbjct: 60 VANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTK--PQTGGGYLGVFNS 106
>pdb|1LOA|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|C Chain C, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|E Chain E, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOA|G Chain G, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide-Binding Site
pdb|1LOB|A Chain A, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|C Chain C, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|E Chain E, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOB|G Chain G, Three-Dimensional Structures Of Complexes Of Lathyrus
Ochrus Isolectin I With Glucose And Mannose: Fine
Specificity Of The Monosaccharide- Binding Site
pdb|1LOC|A Chain A, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|C Chain C, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|E Chain E, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOC|G Chain G, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|A Chain A, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|C Chain C, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|E Chain E, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOD|G Chain G, Interaction Of A Legume Lectin With Two Components Of The
Bacterial Cell Wall
pdb|1LOE|A Chain A, X-Ray Crystal Structure Determination And Refinement At
1.9 Angstroms Resolution Of Isolectin I From The Seeds
Of Lathyrus Ochrus
pdb|1LOE|C Chain C, X-Ray Crystal Structure Determination And Refinement At
1.9 Angstroms Resolution Of Isolectin I From The Seeds
Of Lathyrus Ochrus
pdb|1LOF|A Chain A, X-Ray Structure Of A Biantennary Octasaccharide-Lectin
Complex At 2.3 Angstroms Resolution
pdb|1LOG|A Chain A, X-Ray Structure Of A
(Alpha-Man(1-3)beta-Man(1-4)glcnac)-Lectin Complex At
2.1 Angstroms Resolution
pdb|1LOG|C Chain C, X-Ray Structure Of A
(Alpha-Man(1-3)beta-Man(1-4)glcnac)-Lectin Complex At
2.1 Angstroms Resolution
Length = 181
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNT 73
+ +F T F+F ID G FF+A V + + GG LG+ N+
Sbjct: 60 VANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTK--PQTGGGYLGVFNS 106
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 29.6 bits (65), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHD--------RGEFLLVYEFMPN---GSLDARLFGKKR 282
+ E+K + L+H N+V L+ C +G LV++F + G L L K
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV--KF 122
Query: 283 PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
L+ R M L L Y++ ++HRD K++N+++ D
Sbjct: 123 TLSEIKRVMQM--LLNGLYYIH---RNKILHRDMKAANVLITRD 161
>pdb|1LGC|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|C Chain C, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
pdb|1LGC|E Chain E, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 181
Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNT 73
+ +F T F+F ID G FF+A V + + GG LG+ N+
Sbjct: 60 VANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTK--PQTGGGYLGVFNS 106
>pdb|1LGB|A Chain A, Interaction Of A Legume Lectin With The N2 Fragment Of
Human Lactotransferrin Or With The Isolated Biantennary
Glycopeptide: Role Of The Fucose Moiety
Length = 181
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 25 LTDFSTKFSFQIDTLGRPTYGHGLVFFLATVGLQIPLNSAGGILGLLNT 73
+ +F T F+F ID G FF+A V + + GG LG+ N+
Sbjct: 60 VANFVTSFTFVIDAPNSYNVADGFTFFIAPVDTK--PQTGGGYLGVFNS 106
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 4/110 (3%)
Query: 214 DMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSL 273
D+A + V + + + + EV + + RH N++ +G + +V ++ SL
Sbjct: 60 DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM-TKDNLAIVTQWCEGSSL 118
Query: 274 DARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
L ++ I+ A + YL+ + ++HRD KS+NI L
Sbjct: 119 YKHLHVQETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFL 165
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 10/126 (7%)
Query: 201 NFPENKMGYLIDLDMAAAVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE 260
F E MGY + AVK + G+ + ++ E + L+H LV+L
Sbjct: 25 QFGEVWMGYYNN-STKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTREEP 82
Query: 261 FLLVYEFMPNGSLDARLF---GKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTK 317
++ E+M GSL L G K L + + S +A + Y+ + +HRD +
Sbjct: 83 IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF--SAQIAEGMAYIE---RKNYIHRDLR 137
Query: 318 SSNIML 323
++N+++
Sbjct: 138 AANVLV 143
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 292 ISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
I+L AL +L E + ++HRD K SNI+LD
Sbjct: 130 ITLATVKALNHLKENLK--IIHRDIKPSNILLD 160
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 7/81 (8%)
Query: 246 RNLVQLLGCCHDRGEFLLVYEFMPNGSLDARL--FGKKRPLAWAVRYMISLGLATALLYL 303
R + QL D LV E+ G L L FG++ P A Y+ + +A ++
Sbjct: 121 RWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH- 179
Query: 304 YEEWEQCVVHRDTKSSNIMLD 324
VHRD K NI+LD
Sbjct: 180 ----RLGYVHRDIKPDNILLD 196
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 13/124 (10%)
Query: 218 AVKNVSRGSKQGKKEYVTEVKTISQLRHRNLVQLLGCCH--------DRGEFL-LVYEFM 268
AVK + +++ E + EV+ ++ L Q+ G H + F+ LV++ M
Sbjct: 123 AVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLM 182
Query: 269 PNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVE 328
G L L +K L+ I L A+ +L+ +VHRD K NI+LD +++
Sbjct: 183 RKGELFDYL-TEKVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQ 238
Query: 329 IWTS 332
I S
Sbjct: 239 IRLS 242
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHD--------RGEFLLVYEFMPN---GSLDARLFGKKR 282
+ E+K + L+H N+V L+ C +G LV++F + G L L K
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV--KF 122
Query: 283 PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
L+ R M L L Y++ ++HRD K++N+++ D
Sbjct: 123 TLSEIKRVMQM--LLNGLYYIH---RNKILHRDMKAANVLITRD 161
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 235 TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAW----AVRY 290
E + +++H +V L+ G+ L+ E++ G L +L +R + A Y
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFY 126
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ + +A L+ ++ +++RD K NIML+
Sbjct: 127 LAEISMALGHLH-----QKGIIYRDLKPENIMLN 155
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Query: 234 VTEVKTISQLRHRNLVQLLGCCHD--------RGEFLLVYEFMPN---GSLDARLFGKKR 282
+ E+K + L+H N+V L+ C +G LV++F + G L L K
Sbjct: 64 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV--KF 121
Query: 283 PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
L+ R M L L Y++ ++HRD K++N+++ D
Sbjct: 122 TLSEIKRVMQM--LLNGLYYIH---RNKILHRDMKAANVLITRD 160
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 45/93 (48%), Gaps = 12/93 (12%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAW----AVRYM 291
E + +++H +V L+ G+ L+ E++ G L +L +R + A Y+
Sbjct: 71 ERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQL---EREGIFMEDTACFYL 127
Query: 292 ISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ +A L+ ++ +++RD K NIML+
Sbjct: 128 AEISMALGHLH-----QKGIIYRDLKPENIMLN 155
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLG 295
E ++ + H +V+L G+ L+ +F+ G L RL + V++ ++
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLA-E 138
Query: 296 LATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
LA L +L+ +++RD K NI+LD + I
Sbjct: 139 LALGLDHLHS---LGIIYRDLKPENILLDEEGHI 169
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 29.3 bits (64), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCH-DRG---EFLLVYEFMPNGSLDARLFGKKRPLAWAVRYM 291
E+ LRH N++ + + D G + LV ++ +GSL F V M
Sbjct: 86 EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGM 141
Query: 292 ISLGLATA--LLYLYEE-----WEQCVVHRDTKSSNIML 323
I L L+TA L +L+ E + + HRD KS NI++
Sbjct: 142 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 180
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 64/168 (38%), Gaps = 32/168 (19%)
Query: 187 PRRFFYR-DLASATSNFPENKMG---------------YLIDLDMAAAVKNVSRGSK--- 227
PR FYR +L P+ G Y L AVK +SR +
Sbjct: 10 PRAGFYRQELNKTVWEVPQRLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLI 69
Query: 228 QGKKEYVTEVKTISQLRHRNLVQLLGC------CHDRGEFLLVYEFMPNGSLDARLFGKK 281
++ Y E++ + L+H N++ LL D E LV M D K
Sbjct: 70 HARRTY-RELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM---GADLNNIVKC 125
Query: 282 RPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVDVEI 329
+ L+ + L L Y++ ++HRD K SN+ ++ D E+
Sbjct: 126 QALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDSEL 170
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 15/99 (15%)
Query: 236 EVKTISQLRHRNLVQLLGCCH-DRG---EFLLVYEFMPNGSLDARLFGKKRPLAWAVRYM 291
E+ LRH N++ + + D G + LV ++ +GSL F V M
Sbjct: 73 EIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEGM 128
Query: 292 ISLGLATA--LLYLYEE-----WEQCVVHRDTKSSNIML 323
I L L+TA L +L+ E + + HRD KS NI++
Sbjct: 129 IKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 167
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 28.9 bits (63), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 4/89 (4%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLG 295
E++ + RH ++++L + +V E++ G L + R R +
Sbjct: 66 EIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQ-Q 124
Query: 296 LATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ + + Y + VVHRD K N++LD
Sbjct: 125 ILSGVDYCHR---HMVVHRDLKPENVLLD 150
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQLRHR-NLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 56 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 115
Query: 275 ARLFGKK 281
L K+
Sbjct: 116 TYLRSKR 122
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQLRHR-NLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 54 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 113
Query: 275 ARLFGKK 281
L K+
Sbjct: 114 TYLRSKR 120
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQLRHR-NLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 61 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 120
Query: 275 ARLFGKK 281
L K+
Sbjct: 121 TYLRSKR 127
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 15/107 (14%)
Query: 228 QGKKEYVTEVKTISQLRHRNLVQLLGCCHDRGE-----FL-LVYEFMPNGSLDA-RLFGK 280
Q K+ E++ + ++H N+V L + G+ FL LV E++P A R + K
Sbjct: 74 QDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAK 133
Query: 281 KR---PLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ P+ YM L +L Y++ + HRD K N++LD
Sbjct: 134 LKQTMPMLLIKLYMYQL--LRSLAYIHSIG---ICHRDIKPQNLLLD 175
>pdb|2LAL|B Chain B, Crystal Structure Determination And Refinement At 2.3
Angstroms Resolution Of The Lentil Lectin
pdb|2LAL|D Chain D, Crystal Structure Determination And Refinement At 2.3
Angstroms Resolution Of The Lentil Lectin
pdb|1LEM|B Chain B, The Monosaccharide Binding Site Of Lentil Lectin: An X-Ray
And Molecular Modelling Study
pdb|1LEN|B Chain B, Refinement Of Two Crystal Forms Of Lentil Lectin At 1.8
Angstroms Resolution
pdb|1LEN|D Chain D, Refinement Of Two Crystal Forms Of Lentil Lectin At 1.8
Angstroms Resolution
Length = 52
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 128 IIDLMKVLSQWVTIGFSAATG 148
++ L V+ +WV IGFSA TG
Sbjct: 9 VVPLKDVVPEWVRIGFSATTG 29
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 235 TEVKTISQLRHRNLVQLLGCCH-DRG---EFLLVYEFMPNGSLDARLFGKKRPLAWAVRY 290
E+ LRH N++ + + D G + LV ++ +GSL F V
Sbjct: 52 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEG 107
Query: 291 MISLGLATA--LLYLYEE-----WEQCVVHRDTKSSNIML 323
MI L L+TA L +L+ E + + HRD KS NI++
Sbjct: 108 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 147
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 235 TEVKTISQLRHRNLVQLLGCCH-DRG---EFLLVYEFMPNGSLDARLFGKKRPLAWAVRY 290
E+ LRH N++ + + D G + LV ++ +GSL F V
Sbjct: 49 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEG 104
Query: 291 MISLGLATA--LLYLYEE-----WEQCVVHRDTKSSNIML 323
MI L L+TA L +L+ E + + HRD KS NI++
Sbjct: 105 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 144
>pdb|2B7Y|B Chain B, Fava Bean Lectin-Glucose Complex
pdb|2B7Y|D Chain D, Fava Bean Lectin-Glucose Complex
Length = 51
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 124 SLFYIIDLMKVLSQWVTIGFSAATG 148
+L ++ L V+ +WV IGFSA TG
Sbjct: 5 TLSEVVPLKDVVPEWVRIGFSATTG 29
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 235 TEVKTISQLRHRNLVQLLGCCH-DRG---EFLLVYEFMPNGSLDARLFGKKRPLAWAVRY 290
E+ LRH N++ + + D G + LV ++ +GSL F V
Sbjct: 47 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEG 102
Query: 291 MISLGLATA--LLYLYEE-----WEQCVVHRDTKSSNIML 323
MI L L+TA L +L+ E + + HRD KS NI++
Sbjct: 103 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 142
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 218 AVKNVSRGSKQGK-KEYVTEVKTISQLRHR-NLVQLLGCC-HDRGEFLLVYEFMPNGSLD 274
AVK + G+ + + ++E+K + + H N+V LLG C G +++ EF G+L
Sbjct: 63 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 122
Query: 275 ARLFGKK 281
L K+
Sbjct: 123 TYLRSKR 129
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 15/100 (15%)
Query: 235 TEVKTISQLRHRNLVQLLGCCH-DRG---EFLLVYEFMPNGSLDARLFGKKRPLAWAVRY 290
E+ LRH N++ + + D G + LV ++ +GSL F V
Sbjct: 46 AEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSL----FDYLNRYTVTVEG 101
Query: 291 MISLGLATA--LLYLYEE-----WEQCVVHRDTKSSNIML 323
MI L L+TA L +L+ E + + HRD KS NI++
Sbjct: 102 MIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 141
>pdb|2LTN|B Chain B, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|2LTN|D Chain D, Design, Expression, And Crystallization Of Recombinant
Lectin From The Garden Pea (Pisum Sativum)
pdb|1HKD|B Chain B, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
pdb|1HKD|D Chain D, Structure Of Pea Lectin In Complex With Alpha-Methyl-D-
Glucopyranoside
Length = 52
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 128 IIDLMKVLSQWVTIGFSAATG 148
++ L V+ +WV IGFSA TG
Sbjct: 9 VVSLKDVVPEWVRIGFSATTG 29
>pdb|1BQP|B Chain B, The Structure Of The Pea Lectin-D-Mannopyranose Complex
pdb|1BQP|D Chain D, The Structure Of The Pea Lectin-D-Mannopyranose Complex
Length = 47
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 128 IIDLMKVLSQWVTIGFSAATG 148
++ L V+ +WV IGFSA TG
Sbjct: 9 VVSLKDVVPEWVRIGFSATTG 29
>pdb|1RIN|D Chain D, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
pdb|1RIN|B Chain B, X-Ray Crystal Structure Of A Pea Lectin-Trimannoside
Complex At 2.6 Angstroms Resolution
Length = 49
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 128 IIDLMKVLSQWVTIGFSAATG 148
++ L V+ +WV IGFSA TG
Sbjct: 9 VVSLKDVVPEWVRIGFSATTG 29
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 28.5 bits (62), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 16/131 (12%)
Query: 208 GYLIDLDMAAAVKNVSRGSK---QGKKEYVTEVKTISQLRHRNLVQLLGC------CHDR 258
Y L AVK +SR + ++ Y E++ + L+H N++ LL D
Sbjct: 39 AYDARLRQKVAVKKLSRPFQSLIHARRTY-RELRLLKHLKHENVIGLLDVFTPATSIEDF 97
Query: 259 GEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKS 318
E LV M D K + L+ + L L Y++ ++HRD K
Sbjct: 98 SEVYLVTTLM---GADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS---AGIIHRDLKP 151
Query: 319 SNIMLDVDVEI 329
SN+ ++ D E+
Sbjct: 152 SNVAVNEDCEL 162
>pdb|1OFS|B Chain B, Pea Lectin-sucrose Complex
pdb|1OFS|D Chain D, Pea Lectin-sucrose Complex
Length = 48
Score = 28.5 bits (62), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 15/21 (71%)
Query: 128 IIDLMKVLSQWVTIGFSAATG 148
++ L V+ +WV IGFSA TG
Sbjct: 9 VVSLKDVVPEWVRIGFSATTG 29
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 28.5 bits (62), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRPLAWAVRYMISLG 295
E+ + LRH ++++L + ++V E+ G L + KKR R
Sbjct: 59 EISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQ-Q 116
Query: 296 LATALLYLYEEWEQCVVHRDTKSSNIMLD 324
+ A+ Y + +VHRD K N++LD
Sbjct: 117 IICAIEYCHR---HKIVHRDLKPENLLLD 142
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 28.1 bits (61), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 12/105 (11%)
Query: 226 SKQGKKEYV-TEVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLD---ARLFGKK 281
+Q KKE + E+ + + ++ N+V L E +V E++ GSL +
Sbjct: 57 QQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDE 116
Query: 282 RPLAWAVRYMISLGLATALLYLYEEWEQCVVHRDTKSSNIMLDVD 326
+A R + AL +L+ V+HR+ KS NI+L +D
Sbjct: 117 GQIAAVCRECLQ-----ALEFLHSNQ---VIHRNIKSDNILLGMD 153
>pdb|1LES|B Chain B, Lentil Lectin Complexed With Sucrose
pdb|1LES|D Chain D, Lentil Lectin Complexed With Sucrose
Length = 52
Score = 28.1 bits (61), Expect = 7.6, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 124 SLFYIIDLMKVLSQWVTIGFSAATG 148
+L ++ L V+ +WV IGFSA TG
Sbjct: 5 TLNEVVPLKDVVPEWVRIGFSATTG 29
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 27.7 bits (60), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 10/93 (10%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRP-----LAWAVRY 290
E L+H ++V+LL G +V+EFM L + + A A Y
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
M + AL Y + + ++HRD K ++L
Sbjct: 136 MRQ--ILEALRYCH---DNNIIHRDVKPHCVLL 163
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 27.7 bits (60), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 10/93 (10%)
Query: 236 EVKTISQLRHRNLVQLLGCCHDRGEFLLVYEFMPNGSLDARLFGKKRP-----LAWAVRY 290
E L+H ++V+LL G +V+EFM L + + A A Y
Sbjct: 78 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 137
Query: 291 MISLGLATALLYLYEEWEQCVVHRDTKSSNIML 323
M + AL Y + + ++HRD K ++L
Sbjct: 138 MRQ--ILEALRYCH---DNNIIHRDVKPHCVLL 165
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,171,405
Number of Sequences: 62578
Number of extensions: 339135
Number of successful extensions: 1742
Number of sequences better than 100.0: 690
Number of HSP's better than 100.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 341
Number of HSP's that attempted gapping in prelim test: 1181
Number of HSP's gapped (non-prelim): 766
length of query: 332
length of database: 14,973,337
effective HSP length: 99
effective length of query: 233
effective length of database: 8,778,115
effective search space: 2045300795
effective search space used: 2045300795
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.6 bits)