Query 040186
Match_columns 467
No_of_seqs 137 out of 1221
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 09:08:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040186.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040186hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 4.2E-84 1.4E-88 664.3 45.8 425 2-462 5-438 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 1.1E-74 3.8E-79 591.3 36.2 405 1-463 1-414 (421)
3 2xr7_A Malonyltransferase; xen 100.0 1.6E-73 5.6E-78 588.6 35.5 422 5-463 2-449 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 3.5E-73 1.2E-77 586.1 30.9 425 3-467 5-453 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 9.9E-65 3.4E-69 523.0 34.9 403 25-461 4-442 (451)
6 1q9j_A PAPA5, polyketide synth 99.1 1.1E-08 3.8E-13 103.1 22.7 294 23-369 5-313 (422)
7 1l5a_A Amide synthase, VIBH; n 98.7 4.2E-06 1.4E-10 84.5 26.4 266 57-369 33-304 (436)
8 2jgp_A Tyrocidine synthetase 3 98.7 1.8E-06 6.1E-11 89.6 22.0 292 23-369 94-400 (520)
9 4hvm_A Tlmii; PSI-biology, mid 98.6 1.1E-06 3.8E-11 90.5 17.2 295 23-369 11-327 (493)
10 2xhg_A Tyrocidine synthetase A 98.4 1.5E-05 5.3E-10 81.1 19.3 305 23-371 15-337 (466)
11 2vsq_A Surfactin synthetase su 98.2 5.5E-05 1.9E-09 87.2 20.3 272 57-369 47-327 (1304)
12 3fot_A 15-O-acetyltransferase; 98.1 0.00032 1.1E-08 72.3 21.3 374 56-463 72-513 (519)
13 3cla_A Type III chloramphenico 69.5 2.2 7.5E-05 38.1 2.4 45 137-181 163-209 (213)
14 2i9d_A Chloramphenicol acetylt 68.0 2.4 8.4E-05 37.9 2.4 44 137-180 171-216 (217)
15 1q23_A Chloramphenicol acetylt 67.5 2.5 8.7E-05 37.8 2.4 44 138-181 168-213 (219)
16 3b8k_A PDCE2;, dihydrolipoylly 66.5 3.2 0.00011 37.8 2.8 29 153-181 204-232 (239)
17 1dpb_A Dihydrolipoyl-transacet 63.2 3.4 0.00012 37.7 2.4 29 153-181 208-236 (243)
18 1scz_A E2, dihydrolipoamide su 63.1 3.4 0.00012 37.4 2.4 30 153-182 196-225 (233)
19 3rqc_A Probable lipoamide acyl 62.8 3 0.0001 37.5 1.9 30 153-182 187-216 (224)
20 4hhu_A OR280; engineered prote 61.5 15 0.0005 28.8 5.3 38 58-95 93-130 (170)
21 2ii3_A Lipoamide acyltransfera 61.5 3.8 0.00013 37.8 2.4 29 153-181 224-252 (262)
22 4hhu_A OR280; engineered prote 58.6 15 0.0005 28.8 4.9 38 58-95 12-49 (170)
23 3mae_A 2-oxoisovalerate dehydr 56.3 5.3 0.00018 36.7 2.4 30 153-182 210-239 (256)
24 3l60_A Branched-chain alpha-ke 55.0 5.7 0.0002 36.3 2.4 30 153-182 205-234 (250)
25 2kl8_A OR15; structural genomi 53.8 15 0.00052 25.3 3.7 39 57-95 10-48 (85)
26 2xl1_A Arginine attenuator pep 43.5 19 0.00066 19.3 2.3 19 286-304 6-24 (26)
27 3dva_I Dihydrolipoyllysine-res 40.3 5.9 0.0002 39.3 0.0 30 153-182 391-420 (428)
28 2k1o_A Putative; repressor, tr 30.5 1.1E+02 0.0037 20.6 4.9 40 259-306 14-53 (66)
29 1p94_A Plasmid partition prote 26.9 1.6E+02 0.0053 21.2 5.8 43 256-302 30-72 (76)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=4.2e-84 Score=664.32 Aligned_cols=425 Identities=26% Similarity=0.443 Sum_probs=363.9
Q ss_pred CceEEEeeeeEeeCCCCCCCCCceeeCCcccccc-CccccEEEEecCCCCCCCCChhHHHHHHHHHHHHhhhccccCCee
Q 040186 2 DLEITLKETITVRPSELQAANIQTIELSGLDRIS-PAMLYTIFFFKSQLKNDGENPIELERAKRALQRVLVSWYPAAGRF 80 (467)
Q Consensus 2 ~~~v~v~~~~~V~P~~~~~~~~~~~~LS~lD~~~-~~~~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGri 80 (467)
+|+|+|.++++|+|+.++| .+.++||.||+.+ +.|++.+|||+.+.. ..+ ..+++||+||+++|++||||||||
T Consensus 5 ~~~V~i~~~~~V~P~~~tp--~~~~~LS~lD~~~~~~~~~~~~~y~~~~~--~~~-~~~~~Lk~sLs~~L~~f~plAGRl 79 (439)
T 4g22_A 5 SMKIEVKESTMVRPAQETP--GRNLWNSNVDLVVPNFHTPSVYFYRPTGS--SNF-FDAKVLKDALSRALVPFYPMAGRL 79 (439)
T ss_dssp -CCEEEEEEEEECCSSCCC--CCEECCCHHHHSCCTTCCCEEEEECCCSC--TTT-TCHHHHHHHHHHHTTTTGGGGCEE
T ss_pred ceEEEEeeeEEEeCCCCCC--CCeecCChhHhCccccceeeEEEEcCCCC--ccc-cHHHHHHHHHHHHHhhccccceee
Confidence 5899999999999999998 7899999999997 899999999996432 122 468999999999999999999999
Q ss_pred eeeCCCCcEEEEeCCCCeEEEEEEccCChhhhcCCCCCchhhhcccCCCCCCCCCCCCCeEEEEEEEeecCeEEEeccce
Q 040186 81 KFNETTGKLEIDCNNKGVTMITAVTESKLEEFGCLHEYKPCYEKLVPKLSQSSDVSENPLVLVQITSFACGGISIGLGGS 160 (467)
Q Consensus 81 ~~~~~~G~~~i~~~~~gv~f~~a~~d~~~~~l~~~~~p~~~~~~l~p~~~~~~~~~~~Pll~vQvt~f~~GG~~l~~~~~ 160 (467)
+.++ +|+++|+||++||.|++|++|++++|+.+. .|...+++|+|..++..+..+.|++.+|||+|+|||++||+++|
T Consensus 80 ~~~~-~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~-~p~~~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~ 157 (439)
T 4g22_A 80 KRDE-DGRIEIECNGEGVLFVEAESDGVVDDFGDF-APTLELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMR 157 (439)
T ss_dssp EECT-TSCEEEECCCCCEEEEEEEESSCGGGGTTC-CCCGGGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEEC
T ss_pred eeCC-CCCEEEEECCCCCEEEEEEcCCcHHHhcCC-CCCHHHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEee
Confidence 9988 799999999999999999999999999776 36667889998766554456789999999999999999999999
Q ss_pred eeecccccHHHHHHHHHHHhcCCCCCCCCCCCCCccccccccCCCCCCCCCCcccccccchhhhhhhhhccCCccccccC
Q 040186 161 HALFDGVGAFKFLASWAHVSSGKDESDLTFPNHSRDALLHAISSPNYACPDTSAASIYEQDHVAAIQDLYRIPMQAMASD 240 (467)
Q Consensus 161 H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~~P~~dr~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (467)
|.++||.|+++|+++||+++||.+.+. +|++||+.+..+ +||... ++|.+ |.+.+. ..
T Consensus 158 H~v~Dg~~~~~Fl~~wa~~~rg~~~~~--~P~~dr~~l~~~------~pp~~~------~~~~~----~~~~~~----~~ 215 (439)
T 4g22_A 158 HHAADGFSGLHFINSWSDMARGLDVTL--PPFIDRTLLRAR------DPPQPQ------FQHIE----YQPPPA----LA 215 (439)
T ss_dssp TTTCCHHHHHHHHHHHHHHHTTCCCSS--CCBCCGGGGCCC------SSCCCS------SCCGG----GSCCC-------
T ss_pred eccCcHHHHHHHHHHHHHHhCCCCCCC--CCccccccccCC------CCCCCC------cCccc----ccCCCC----Cc
Confidence 999999999999999999999987655 799999988766 677654 55655 654433 11
Q ss_pred cccccccccccCCCCCCCCeEEEEEEeCHHHHHHHHHHhhhcCCCccccHHHHHHHHHHHHHHHHhcCCCCCcEEEEEEE
Q 040186 241 DRCWKTALSKFGQIDPQGELVLVTLSVKKVVVDAWKGMAIESGNLTRCSTFDVLCAHVWKARVMALKLHPRTNICLQFPV 320 (467)
Q Consensus 241 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~v 320 (467)
+.....+ .....+++.++|+|++++|++||+.+..+....++|++|+|+||+|||++|||+.++++.+++.++|
T Consensus 216 ~~~~~~~------~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~rAr~~~~~~~~~l~~~v 289 (439)
T 4g22_A 216 VSPQTAA------SDSVPETAVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACKARGLEVDQGTKLYIAT 289 (439)
T ss_dssp ------------------CEEEEEEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHHHTTCCTTCEEEEEEEE
T ss_pred ccccccc------cCCcccceEEEEEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHHhcCCCCCCcEEEEEEE
Confidence 1100000 0012578999999999999999999987644568999999999999999999998888999999999
Q ss_pred eCCCCCCCCCCCCCccceeeccccccchhhhccchHHHHHHHHHHHHhhCCHHHHHHHHHHhhcccC-----CCCCCC-C
Q 040186 321 DSRSRLRPPLGENFTGNAFVLASVSCSVKDLLKEPLHQTIQRIQEAKDVITDEYIKLYAKALEYSSD-----KFFPSM-R 394 (467)
Q Consensus 321 d~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~~~~~~~~~~~~~~~~~~-----~~~p~~-~ 394 (467)
|+|+|++||+|++||||++..+.+.++++||.+++|+++|..||+++.+++++++++.++|++..+. ++.+.+ .
T Consensus 290 d~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el~~~~L~~~A~~Ir~ai~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (439)
T 4g22_A 290 DGRARLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWYAASKIHDALARMDNDYLRSALDYLELQPDLKALVRGAHTFKC 369 (439)
T ss_dssp ECTTTSSSCCCTTBCSCCEEEECCEEEHHHHHHSCHHHHHHHHHHHHHTCSHHHHHHHHHHHHTCSCSTTCCCCHHHHCT
T ss_pred cccCCCCCCCCCCcccceeehhhcceEHHHHhhCcHHHHHHHHHHHHHhhCHHHHHHHHHHHHhCccchhhcccCCcCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999986431 111222 4
Q ss_pred CcEEEeecCCCCCcccccCCCccccceeecccCCCceEEEEecCC--CcEEEEEecCHHHHHHHHHHHhh
Q 040186 395 ELTIITDWLRFPFHALDFGWGPRLSGAVLLATPVPETAFLMLDLE--GGYLVRLGIEKKHVQNLINNFNN 462 (467)
Q Consensus 395 ~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~~g~~~ilp~~~--g~~~v~v~L~~~~m~~l~~~~~~ 462 (467)
.++.+|||+++++|++|||||+| +++++.....+|.++++|+++ ||++|.|+|++++|++|++++++
T Consensus 370 ~~~~vssw~r~~~y~~DFGwGkP-~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~L~~~~m~~f~~~~~~ 438 (439)
T 4g22_A 370 PNLGITSWVRLPIHDADFGWGRP-IFMGPGGIAYEGLSFILPSPTNDGSMSVAISLQGEHMKLFQSFLYD 438 (439)
T ss_dssp TCEEEEECTTSCTTCCCCSSCCC-SEEEESSCCSTTEEEEEECTTCSSCEEEEEEEEHHHHHHHHHHHTC
T ss_pred CcEEEeecCcCCccccccCCCCc-ceeeccccCCCcEEEEeecCCCCCcEEEEEECCHHHHHHHHHHhcc
Confidence 68999999999999999999999 999987767789999999975 89999999999999999999875
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=1.1e-74 Score=591.29 Aligned_cols=405 Identities=22% Similarity=0.350 Sum_probs=332.6
Q ss_pred CCceEEEeeeeEeeCCCCCCCCCceeeCCcccccc-CccccEEEEecCCCCCCCCChhHHHHHHHHHHHHhhhccccCCe
Q 040186 1 MDLEITLKETITVRPSELQAANIQTIELSGLDRIS-PAMLYTIFFFKSQLKNDGENPIELERAKRALQRVLVSWYPAAGR 79 (467)
Q Consensus 1 ~~~~v~v~~~~~V~P~~~~~~~~~~~~LS~lD~~~-~~~~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGr 79 (467)
|.|+|+|.++++|+|+.|+|.+.+.++||.||+.+ +.|++.+|||+.++....+.+.++++||+||+++|++||+||||
T Consensus 1 m~m~v~v~~~~~V~P~~ptp~~~~~~~LS~lD~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGR 80 (421)
T 2bgh_A 1 MAPQMEKVSEELILPSSPTPQSLKCYKISHLDQLLLTCHIPFILFYPNPLDSNLDPAQTSQHLKQSLSKVLTHFYPLAGR 80 (421)
T ss_dssp ---CEEEEEEEEEECSSCCCTTSCCCBCCHHHHTSCSSEEEEEEEECCCSSCCCCHHHHHHHHHHHHHHHTTTSGGGGSE
T ss_pred CCceEEEeeeEEEeCCCCCCCCCcccCCChHHhcccccccceEEEEeCCCccccchhhHHHHHHHHHHHHhhhcchhccc
Confidence 78999999999999999988445699999999986 89999999999643211124568999999999999999999999
Q ss_pred eeeeCCCCcEEEEeCCCCeEEEEEEccCChhhhcCCCCCchhhhcccCCCCCCCC----CCCCCeEEEEEEEeecCeEEE
Q 040186 80 FKFNETTGKLEIDCNNKGVTMITAVTESKLEEFGCLHEYKPCYEKLVPKLSQSSD----VSENPLVLVQITSFACGGISI 155 (467)
Q Consensus 80 i~~~~~~G~~~i~~~~~gv~f~~a~~d~~~~~l~~~~~p~~~~~~l~p~~~~~~~----~~~~Pll~vQvt~f~~GG~~l 155 (467)
|+ . +++|+|+++||.|++|++|++++|+.+..++...+++|+|.. ...+ ..+.|++.+|||+|+|||++|
T Consensus 81 l~--~---~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~~~~~~l~p~~-~~~~~~~~~~~~pll~vQvt~f~cgG~~l 154 (421)
T 2bgh_A 81 IN--V---NSSVDCNDSGVPFVEARVQAQLSQAIQNVVELEKLDQYLPSA-AYPGGKIEVNEDVPLAVKISFFECGGTAI 154 (421)
T ss_dssp EE--T---TTEEECCCCCEEEEEEEESSCHHHHHSCCSSGGGGGGGSSSC-SSSSSSSCCCTTCSEEEEEEECTTSCEEE
T ss_pred cC--C---CcEEEEcCCceEEEEEEEcCCHHHHhccCCChHHHHhcCCCC-CCccccccccCCceEEEEEEEEcCCCEEE
Confidence 96 1 589999999999999999999999975423334677888865 2221 356899999999999999999
Q ss_pred eccceeeecccccHHHHHHHHHHHhcCCCCCCCCCCCCCc-cccccccCCCCCCCCCCcccccccchhhhhhhhhccCCc
Q 040186 156 GLGGSHALFDGVGAFKFLASWAHVSSGKDESDLTFPNHSR-DALLHAISSPNYACPDTSAASIYEQDHVAAIQDLYRIPM 234 (467)
Q Consensus 156 ~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~~~P~~dr-~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 234 (467)
|+++||.++||.|+++|+++||+++||..... .|++|| +.+. |+... . . . +.
T Consensus 155 g~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~--~P~~dr~~~l~---------p~~~~------~---~----~---~~ 207 (421)
T 2bgh_A 155 GVNLSHKIADVLSLATFLNAWTATCRGETEIV--LPNFDLAARHF---------PPVDN------T---P----S---PE 207 (421)
T ss_dssp EEEEETTTCCHHHHHHHHHHHHHHHTTCSCCC--CCBCSHHHHHS---------CCCTT------C---C----C---CC
T ss_pred EEEeeEEechHHHHHHHHHHHHHHhcCCCCCC--CCccccccccC---------CCccc------C---C----C---Cc
Confidence 99999999999999999999999999976444 788998 6552 22001 0 0 0 10
Q ss_pred cccccCcccccccccccCCCCCCCCeEEEEEEeCHHHHHHHHHHhhhcCCCccccHHHHHHHHHHHHHHHHhcCC--CCC
Q 040186 235 QAMASDDRCWKTALSKFGQIDPQGELVLVTLSVKKVVVDAWKGMAIESGNLTRCSTFDVLCAHVWKARVMALKLH--PRT 312 (467)
Q Consensus 235 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~--~~~ 312 (467)
. ....+++.++|+|++++|++||+.+.++....++|+||+|+||+|+|+++||... +++
T Consensus 208 ----~---------------~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~~~~~ 268 (421)
T 2bgh_A 208 ----L---------------VPDENVVMKRFVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKYGAKN 268 (421)
T ss_dssp ----C---------------CCCSSEEEEEEEECHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHSCCCS
T ss_pred ----c---------------CCccceEEEEEEECHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccCCCCC
Confidence 0 1234678999999999999999999765434689999999999999999998642 567
Q ss_pred cEEEEEEEeCCCCCCCCCCCCCccceeeccccccchhhhccchHHHHHHHHHHHHhhCCHHHHHHHHHHhhcccCCCCCC
Q 040186 313 NICLQFPVDSRSRLRPPLGENFTGNAFVLASVSCSVKDLLKEPLHQTIQRIQEAKDVITDEYIKLYAKALEYSSDKFFPS 392 (467)
Q Consensus 313 ~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~~~~~~~~~~~~~~~~~~~~~p~ 392 (467)
.+++.++||+|+|++||+|++||||++..+.+.+++++ +.+|+++|..||+++.++++++++...++.+.. ...+
T Consensus 269 ~~~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~--~~~l~~~a~~ir~ai~~~~~~~~~~~~~~~~~~--~~~~- 343 (421)
T 2bgh_A 269 KFVVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEW--DKDFPDLIGPLRTSLEKTEDDHNHELLKGMTCL--YELE- 343 (421)
T ss_dssp CEEEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTC--CCCGGGGHHHHHHHTCCCSSCHHHHHHHHHHHH--HTSC-
T ss_pred ceEEEEEecCccccCCCCCCCccceEEEEEEEEecccc--cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hccC-
Confidence 89999999999999999999999999999988888876 789999999999999999999999888776531 1111
Q ss_pred CCCcEEEeecCCCCCcccccCCCccccceeecccCCCceEEEEecCC-CcEEEEEecCHHHHHHHHHHHhhh
Q 040186 393 MRELTIITDWLRFPFHALDFGWGPRLSGAVLLATPVPETAFLMLDLE-GGYLVRLGIEKKHVQNLINNFNNF 463 (467)
Q Consensus 393 ~~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~~g~~~ilp~~~-g~~~v~v~L~~~~m~~l~~~~~~~ 463 (467)
....+.+|||+++++|++|||||+| +++++.....+|.++++|+++ +|++|.|+|++++|++|++++.++
T Consensus 344 ~~~~~~vssw~~~~~y~~DFGwGkP-~~v~~~~~~~~g~~~~~p~~~~~gi~v~v~L~~~~m~~f~~e~~~~ 414 (421)
T 2bgh_A 344 PQELLSFTSWCRLGFYDLDFGWGKP-LSACTTTFPKRNAALLMDTRSGDGVEAWLPMAEDEMAMLPVELLSL 414 (421)
T ss_dssp GGGEEEEEEETTSCGGGCCSSSCCC-SEEECCCCCSTTEEEEEECTTSSSEEEEEEEEHHHHHHSCHHHHTT
T ss_pred CCCeEEEeccccCCCcccccCCCcc-CeecccccCcCCEEEEEecCCCCeEEEEEEcCHHHHHHHHHHHHHh
Confidence 1246999999999999999999999 999987766789999999988 789999999999999999987654
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=1.6e-73 Score=588.57 Aligned_cols=422 Identities=20% Similarity=0.279 Sum_probs=338.2
Q ss_pred EEEeeeeEeeCCCCCCCCCceeeCCccccc-c-CccccEEEEecCCCCCCCCChhHHHHHHHHHHHHhhhccccCCeeee
Q 040186 5 ITLKETITVRPSELQAANIQTIELSGLDRI-S-PAMLYTIFFFKSQLKNDGENPIELERAKRALQRVLVSWYPAAGRFKF 82 (467)
Q Consensus 5 v~v~~~~~V~P~~~~~~~~~~~~LS~lD~~-~-~~~~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGri~~ 82 (467)
|+|.++++|+|+.++++ .+.++||.||+. + ..|++.+|||+.+......++..+++||+||+++|++||+|||||+.
T Consensus 2 v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~ 80 (453)
T 2xr7_A 2 ASVIEQCQVVPSPGSAT-ELTLPLTYFDHVWLAFHRMRRILFYKLPISRPDFVQTIIPTLKDSLSLTLKYYLPLAGNVAC 80 (453)
T ss_dssp CEEEEESCCCCCTTCCS-EEEEECCHHHHGGGGSCCEEEEEEEECCCCSHHHHHTHHHHHHHHHHHHHTTSGGGGSCCEE
T ss_pred eEEEEEEEecCCCCCCC-CceECCCHHHhhhhhcCCccEEEEEeCCCCCchhHHHHHHHHHHHHHHHhhhccccCeeEEc
Confidence 89999999999987542 689999999998 4 47999999999543200003357899999999999999999999998
Q ss_pred eCC-CCcEEEEeC-CCCeEEEEEEccCChhhhcCCC-CCchhhhcccCCCCCCCC---CCCCCeEEEEEEEeecCeEEEe
Q 040186 83 NET-TGKLEIDCN-NKGVTMITAVTESKLEEFGCLH-EYKPCYEKLVPKLSQSSD---VSENPLVLVQITSFACGGISIG 156 (467)
Q Consensus 83 ~~~-~G~~~i~~~-~~gv~f~~a~~d~~~~~l~~~~-~p~~~~~~l~p~~~~~~~---~~~~Pll~vQvt~f~~GG~~l~ 156 (467)
+++ +|+++|+|+ ++||.|++|++|.+++++.... .|...+++|+|..+.... ..+.|++.+|||+|+|||++||
T Consensus 81 ~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg 160 (453)
T 2xr7_A 81 PQDWSGYPELRYVTGNSVSVIFSESDMDFNYLIGYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIG 160 (453)
T ss_dssp ESSTTCCCEEEEETTCCCEEEEEECCSCHHHHTCSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEEEE
T ss_pred cCCCCCCEEEEecCCCceEEEEEecCCCHHHhhccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEEEE
Confidence 754 689999998 5999999999999999996532 355567889886543211 1238999999999999999999
Q ss_pred ccceeeecccccHHHHHHHHHHHhc-CC-C--CCCCCCCCCCccccccccCCCCCCCCCCcccccccchhhhhhhhhccC
Q 040186 157 LGGSHALFDGVGAFKFLASWAHVSS-GK-D--ESDLTFPNHSRDALLHAISSPNYACPDTSAASIYEQDHVAAIQDLYRI 232 (467)
Q Consensus 157 ~~~~H~v~Dg~~~~~fl~~wa~~~r-g~-~--~~~~~~P~~dr~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 232 (467)
+++||.++||.|+++|+++||+++| |. . ......|++||+.+. +|+. ..+.. ++.+...
T Consensus 161 ~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~~~~~~P~~dr~~l~--------~p~~--------~~~~~-~~~~~~~ 223 (453)
T 2xr7_A 161 FTNHHVAGDGATIVKFVRAWALLNKFGGDEQFLANEFIPFYDRSVIK--------DPNG--------VGMSI-WNEMKKY 223 (453)
T ss_dssp EEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGSCGGGSCBCCCSSSC--------CSSC--------HHHHT-TTTGGGC
T ss_pred EeeeeeeechhHHHHHHHHHHHHhhcCCCcccCCCCCCCcccccccc--------CCCC--------cchHH-HHhcccc
Confidence 9999999999999999999999999 86 3 111126899998764 2332 11110 0111110
Q ss_pred CccccccCcccccccccccCCCCCCCCeEEEEEEeCHHHHHHHHHHhhhcCCC-ccccHHHHHHHHHHHHHHHHhcC---
Q 040186 233 PMQAMASDDRCWKTALSKFGQIDPQGELVLVTLSVKKVVVDAWKGMAIESGNL-TRCSTFDVLCAHVWKARVMALKL--- 308 (467)
Q Consensus 233 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~-~~~S~~d~l~A~lW~~~~~ar~~--- 308 (467)
+. .. .. . . .....+.+.++|+|++++|++||+.+.++..+ .++|+||+|+||+|||+++||..
T Consensus 224 ~~----~~----~~--~--~-~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l~A~lW~~~~~Ar~~~~~ 290 (453)
T 2xr7_A 224 KH----MM----KM--S--D-VVTPPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVTCAYVWTCIIKSEAATGE 290 (453)
T ss_dssp TT----TS----CC--S--C-CCCCCSCCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CC----cc----cc--c--c-ccCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHHHHhccccc
Confidence 11 00 00 0 0 01234677899999999999999999875422 68999999999999999999975
Q ss_pred --CCCCcEEEEEEEeCCCCCCCCCCCCCccceeeccccccchhhhcc-chHHHHHHHHHHHHhh--CCHH-HHHHHHHHh
Q 040186 309 --HPRTNICLQFPVDSRSRLRPPLGENFTGNAFVLASVSCSVKDLLK-EPLHQTIQRIQEAKDV--ITDE-YIKLYAKAL 382 (467)
Q Consensus 309 --~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~-~~L~~~A~~Ir~ai~~--~~~~-~~~~~~~~~ 382 (467)
++++.+++.++||+|+|++||+|++||||++..+.+.++++||.+ .+|+++|..||+++.+ .+++ ++++ +|+
T Consensus 291 ~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~e~~~~~--~~~ 368 (453)
T 2xr7_A 291 EIDENGMEFFGCAADCRAQFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTIAVELIGEAIRKRMKDEEWILSG--SWF 368 (453)
T ss_dssp CCCTTSEEEEEEECCTTSCSSSCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHHHHHHHHHHHTTSSSCHHHHHSS--CTT
T ss_pred cCCCCcceEEEEEecccccCCCCCCcccccceeeeeeeeeeHHHhcCcchHHHHHHHHHHHHHhhccCCccchhh--HHH
Confidence 567899999999999999999999999999999999999999995 8999999999999999 5788 8988 787
Q ss_pred hcccCCCCCCCCCcEEEeecCCCCCcccccCCCccccceeecccCCCc--eEEEEecCC--CcEEEEEecCHHHHHHHHH
Q 040186 383 EYSSDKFFPSMRELTIITDWLRFPFHALDFGWGPRLSGAVLLATPVPE--TAFLMLDLE--GGYLVRLGIEKKHVQNLIN 458 (467)
Q Consensus 383 ~~~~~~~~p~~~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~~g--~~~ilp~~~--g~~~v~v~L~~~~m~~l~~ 458 (467)
+.. +.. ....++.+|||+++++|++|||||+| +++++.....+| .++++|+++ ||++|.|+|++++|++|++
T Consensus 369 ~~~--~~~-~~~~~~~vssw~~~~~y~~DFG~G~P-~~v~~~~~~~~g~~~~~l~~~~~~~ggi~v~v~L~~~~m~~f~~ 444 (453)
T 2xr7_A 369 KEY--DKV-DAKRSLSVAGSPKLDLYAADFGWGRP-EKLEFVSIDNDDGISMSLSKSKDSDGDLEIGLSLSKTRMNAFAA 444 (453)
T ss_dssp SCC--CCS-CGGGEEEECSCSSCCGGGCCCSSCSC-SEEEEGGGSSCSSCEEEEEECSSSTTCEEEEECCCHHHHHHHHH
T ss_pred HHH--Hhh-ccCCcEEEeccccCCccccccCCCcc-eEEEeeeecCCCceEEEEeecCCCCCCEEEEEEeCHHHHHHHHH
Confidence 752 111 11358999999999999999999999 999987766788 888898776 8999999999999999999
Q ss_pred HHhhh
Q 040186 459 NFNNF 463 (467)
Q Consensus 459 ~~~~~ 463 (467)
++.+.
T Consensus 445 ~~~~~ 449 (453)
T 2xr7_A 445 MFTHG 449 (453)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99764
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=3.5e-73 Score=586.12 Aligned_cols=425 Identities=20% Similarity=0.277 Sum_probs=331.7
Q ss_pred ceEEEeeeeEeeCCCCCCCCCceeeCCccccc-c-CccccEEEEecCCCCCCCCChhHHHHHHHHHHHHhhhccccCCee
Q 040186 3 LEITLKETITVRPSELQAANIQTIELSGLDRI-S-PAMLYTIFFFKSQLKNDGENPIELERAKRALQRVLVSWYPAAGRF 80 (467)
Q Consensus 3 ~~v~v~~~~~V~P~~~~~~~~~~~~LS~lD~~-~-~~~~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGri 80 (467)
++|+|.++++|+|+.++++ .+.++||.||+. + ..|++.+|||+.+......++..+++||+||+++|++||+|||||
T Consensus 5 ~~v~v~~~~~V~P~~~~~~-~~~~~LS~lD~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~Lk~sLs~~L~~~~plAGRl 83 (454)
T 2e1v_A 5 PILTVLEQSQVSPPPDTLG-DKSLQLTFFDFFWLRSPPINNLFFYELPITRSQFTETVVPNIKHSLSITLKHFYPFVGKL 83 (454)
T ss_dssp -CEEEEEEEEECCCTTSCC-CEEEECCHHHHTTTTCCCEEEEEEEECCCCHHHHHHTHHHHHHHHHHHHHTTCGGGGSEE
T ss_pred ceEEEEEEEEEeCCCCCCC-CceecCchHHhhhhccCCccEEEEEeCCCCcchhhHHHHHHHHHHHHHHhhhccccceee
Confidence 4899999999999987543 789999999998 4 469999999995422000023568999999999999999999999
Q ss_pred e-eeCCCCcEEEEeC-CCCeEEEEEEccCChhhhcCCC-CCchhhhcccCCCCCCC---CCCCCCeEEEEEEEeecCeEE
Q 040186 81 K-FNETTGKLEIDCN-NKGVTMITAVTESKLEEFGCLH-EYKPCYEKLVPKLSQSS---DVSENPLVLVQITSFACGGIS 154 (467)
Q Consensus 81 ~-~~~~~G~~~i~~~-~~gv~f~~a~~d~~~~~l~~~~-~p~~~~~~l~p~~~~~~---~~~~~Pll~vQvt~f~~GG~~ 154 (467)
+ .++++|+++|+|+ ++||.|++|++|.+++++.... .|...+++|+|..+... +..+.|++.+|||+|+|||++
T Consensus 84 ~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~~ 163 (454)
T 2e1v_A 84 VVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELTGNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIA 163 (454)
T ss_dssp EECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTSSSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETTTEEE
T ss_pred eeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhcCCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecCCcEE
Confidence 8 6533899999998 5999999999999999996542 24456788988754321 113459999999999999999
Q ss_pred EeccceeeecccccHHHHHHHHHHHhc-CCC----C--CCCCCCCCCccccccccCCCCCCCCCCcccccccchhhhhhh
Q 040186 155 IGLGGSHALFDGVGAFKFLASWAHVSS-GKD----E--SDLTFPNHSRDALLHAISSPNYACPDTSAASIYEQDHVAAIQ 227 (467)
Q Consensus 155 l~~~~~H~v~Dg~~~~~fl~~wa~~~r-g~~----~--~~~~~P~~dr~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 227 (467)
||+++||.++||.|+++|+++||+++| |.. . +. .|++|| .+. +|+ .. .... +
T Consensus 164 lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~~~~~~--~P~~dr-~l~--------~p~-~~------~~~~---~ 222 (454)
T 2e1v_A 164 IGITNHHCLGDASTRFCFLKAWTSIARSGNNDESFLANGT--RPLYDR-IIK--------YPM-LD------EAYL---K 222 (454)
T ss_dssp EEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHHHHHSC--CCBCCC-CCC--------CHH-HH------HHHH---H
T ss_pred EEEEeeeeecchhHHHHHHHHHHHHhccCCCccccCCCCC--CCcccc-cCC--------CCC-cc------hHHH---H
Confidence 999999999999999999999999999 863 1 33 689999 553 222 11 1111 1
Q ss_pred hhccCCccccccCcccccccccccCCCCCCCCeEEEEEEeCHHHHHHHHHHhhhcCCC-ccccHHHHHHHHHHHHHHHHh
Q 040186 228 DLYRIPMQAMASDDRCWKTALSKFGQIDPQGELVLVTLSVKKVVVDAWKGMAIESGNL-TRCSTFDVLCAHVWKARVMAL 306 (467)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~-~~~S~~d~l~A~lW~~~~~ar 306 (467)
.+...... ...... .+ ....+.+.++|+|++++|++||+.+.++..+ .++|+||+|+||+|||+++||
T Consensus 223 ~~~~~~~~-~~~~~~--~~--------~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d~l~A~lWr~~~~Ar 291 (454)
T 2e1v_A 223 RAKVESFN-EDYVTQ--SL--------AGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFTVACAYIWSCIAKSR 291 (454)
T ss_dssp HTTCTTHH-HHCCCC--CC--------CCCCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHHHHHHHHHHHHHHHH
T ss_pred hhhccccc-cccCcc--cC--------CCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHHHHHHHHHHhhhc
Confidence 12110000 000000 00 1235678999999999999999999875432 689999999999999999999
Q ss_pred cCCCCCcEEEEEEEeCCCCCCCCCCCCCccceeeccccccchhhhcc-chHHHHHHHHHHHHhhCCHHH----HHH-HHH
Q 040186 307 KLHPRTNICLQFPVDSRSRLRPPLGENFTGNAFVLASVSCSVKDLLK-EPLHQTIQRIQEAKDVITDEY----IKL-YAK 380 (467)
Q Consensus 307 ~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~-~~L~~~A~~Ir~ai~~~~~~~----~~~-~~~ 380 (467)
+++.+++.++||+|+|++||+|++||||++..+.+.++++||.+ .+|+++|..||+++.+++++| +++ ..+
T Consensus 292 ---~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~~a~~Ir~ai~~~~~~~~~~~~~~~~~~ 368 (454)
T 2e1v_A 292 ---NDKLQLFGFPIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFITAAKLIGENLHKTLTDYKDGVLKDDMES 368 (454)
T ss_dssp ---CCSEEEEEEEEECGGGSSSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC----
T ss_pred ---CCCceEEEEEecchhccCCCCCcccccceeeeEEeecchhhccccccHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Confidence 57899999999999999999999999999999999999999995 899999999999999987444 444 455
Q ss_pred HhhcccCCCCCCCCCcEEEeecCCCCCcccccCCCccccceeecccCCCceEEEEecCC--CcEEEEEecCHHHHHHHHH
Q 040186 381 ALEYSSDKFFPSMRELTIITDWLRFPFHALDFGWGPRLSGAVLLATPVPETAFLMLDLE--GGYLVRLGIEKKHVQNLIN 458 (467)
Q Consensus 381 ~~~~~~~~~~p~~~~~~~~ssw~~~~~~~~DFG~G~P~~~~~~~~~~~~g~~~ilp~~~--g~~~v~v~L~~~~m~~l~~ 458 (467)
|++.. +.. ..+.++.+|||+++++|++|||||+| +++++.....+|.++++|+++ ||++|.|+|++++|++|++
T Consensus 369 ~~~~~--~~~-~~~~~~~vssw~~~~~y~~DFG~G~P-~~v~~~~~~~~g~~~l~p~~~~~ggi~v~v~L~~~~m~~f~~ 444 (454)
T 2e1v_A 369 FNDLV--SEG-MPTTMTWVSGTPKLRFYDMDFGWGKP-KKLETVSIDHNGAISINSCKESNEDLEIGVCISATQMEDFVH 444 (454)
T ss_dssp -CHHH--HHC-CCSEEEEEECCTTSCGGGCCSSSCSC-SEEEEGGGGGSSEEEEEECSSCTTSEEEEEEEEHHHHHHHHH
T ss_pred HHHHH--Hhh-cCCceEEEecCCCCCcccccccCccc-eEEEeeeeCCCCeEEEEecCCCCCCEEEEEEECHHHHHHHHH
Confidence 55531 111 11348999999999999999999999 999987656688999999876 8999999999999999999
Q ss_pred HHhhhhcCC
Q 040186 459 NFNNFDFKY 467 (467)
Q Consensus 459 ~~~~~~~~~ 467 (467)
++.+.--.|
T Consensus 445 ~~~~~~~~~ 453 (454)
T 2e1v_A 445 IFDDGLKAY 453 (454)
T ss_dssp HHHHHC---
T ss_pred HHHHHHHhh
Confidence 998765443
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=9.9e-65 Score=522.99 Aligned_cols=403 Identities=16% Similarity=0.219 Sum_probs=314.0
Q ss_pred eeeCCcccccc---CccccEEEEecCCCCCCCCChhHHHHHHHHHHHHhhhccccCCeeeeeC----CCCcEEEEeCCCC
Q 040186 25 TIELSGLDRIS---PAMLYTIFFFKSQLKNDGENPIELERAKRALQRVLVSWYPAAGRFKFNE----TTGKLEIDCNNKG 97 (467)
Q Consensus 25 ~~~LS~lD~~~---~~~~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGri~~~~----~~G~~~i~~~~~g 97 (467)
.++||.|||+. +.|++.+|||+..+. .+++..+++||+||+++|++||||||||+.++ .+|+++|+|++++
T Consensus 4 ~~~Ls~lD~~~~~~~~y~~~~~~y~~~~~--~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~ 81 (451)
T 2rkv_A 4 KIQLDTLGQLPGLLSIYTQISLLYPVSDS--SQYPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDV 81 (451)
T ss_dssp CEECCGGGGCTTGGGCEEEEEEEEECSCG--GGHHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSS
T ss_pred cccCChhhcCccccccceeEEEEEECCCC--CCHHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCC
Confidence 46999999984 799999999994321 02346799999999999999999999998865 2689999988777
Q ss_pred eEEEEEEccC-----ChhhhcCCCCCchhhh--cccCCC--CCC---CCCCCCCeEEEEEEEeecCeEEEeccceeeecc
Q 040186 98 VTMITAVTES-----KLEEFGCLHEYKPCYE--KLVPKL--SQS---SDVSENPLVLVQITSFACGGISIGLGGSHALFD 165 (467)
Q Consensus 98 v~f~~a~~d~-----~~~~l~~~~~p~~~~~--~l~p~~--~~~---~~~~~~Pll~vQvt~f~~GG~~l~~~~~H~v~D 165 (467)
+.|++++++. +++++.+.+.|...++ .|.|.. +.. ....+.|++.+||| |.|||++||+++||.++|
T Consensus 82 ~~~~va~~~~d~~~p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT-~~~GG~~lg~~~~H~v~D 160 (451)
T 2rkv_A 82 PRVVVKDLRDDPSAPTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLN-FIKGGLILTVNGQHGAMD 160 (451)
T ss_dssp CEEEEEECTTCTTSCBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEE-EEBTEEEEEEEEETTTCC
T ss_pred CeEEEEeCCCCCCCCCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEE-EecCceeeeeeehhcccc
Confidence 7799998864 6777764334554332 244432 111 12345899999999 559999999999999999
Q ss_pred cccHHHHHHHHHHHhcCCCCCC--CCCCCCCccccccccCCCCCCCCCCcccccccchhhhhhhhhccCCccccccCccc
Q 040186 166 GVGAFKFLASWAHVSSGKDESD--LTFPNHSRDALLHAISSPNYACPDTSAASIYEQDHVAAIQDLYRIPMQAMASDDRC 243 (467)
Q Consensus 166 g~~~~~fl~~wa~~~rg~~~~~--~~~P~~dr~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (467)
|.|+++|+++||+++||.+.+. ...|++||+.+.+...+ .+|... +++.+ |...+. ...
T Consensus 161 g~g~~~Fl~awa~~~rg~~~~~~~~~~p~~dr~~~~p~~~~---~~p~~~------~~~~~----~~~~~~----~~~-- 221 (451)
T 2rkv_A 161 MVGQDAVIRLLSKACRNDPFTEEEMTAMNLDRKTIVPYLEN---YTIGPE------VDHQI----VKADVA----GGD-- 221 (451)
T ss_dssp HHHHHHHHHHHHHHHHTCCCCHHHHHHTTCCSTTSSCCCTT---CCCCGG------GTTCB----CCTTSC----C----
T ss_pred HHHHHHHHHHHHHHhcCCCCCccccccccCchhhccccccc---cCCCcc------ccccc----cCCCCC----CCC--
Confidence 9999999999999999975421 01478999765443211 233322 33332 322211 000
Q ss_pred ccccccccCCCCCCCCeEEEEEEeCHHHHHHHHHHhhhcCC--CccccHHHHHHHHHHHHHHHHh-c-CCCCCcEEEEEE
Q 040186 244 WKTALSKFGQIDPQGELVLVTLSVKKVVVDAWKGMAIESGN--LTRCSTFDVLCAHVWKARVMAL-K-LHPRTNICLQFP 319 (467)
Q Consensus 244 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~--~~~~S~~d~l~A~lW~~~~~ar-~-~~~~~~~~l~~~ 319 (467)
. .....++..++|+|++++|++||+.+.++.. +.++|++|+|+||+|||+++|| . .++++.+++.++
T Consensus 222 --~-------~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~~St~d~l~A~~Wr~~~~Ar~~~~~~~~~~~l~~~ 292 (451)
T 2rkv_A 222 --A-------VLTPVSASWAFFTFSPKAMSELKDAATKTLDASTKFVSTDDALSAFIWKSASRVRLERIDGSAPTEFCRA 292 (451)
T ss_dssp --------------CCEEEEEEEECHHHHHHHHHHHHTTCCTTCSCCCHHHHHHHHHHHHHHHHHTTTSCTTSEEEEEEE
T ss_pred --C-------CCCCCCceEEEEEECHHHHHHHHHHHhhhccCCCCCccHHHHHHHHHHHHHHHHHhccCCCCCceEEEEE
Confidence 0 0134578899999999999999999987542 4679999999999999999998 3 567889999999
Q ss_pred EeCCCCCCCCCCCCCccceeeccccccchhhhccchHHHHHHHHHHHHhhCCHHH-HHHHHHHhhcccCCC---C---CC
Q 040186 320 VDSRSRLRPPLGENFTGNAFVLASVSCSVKDLLKEPLHQTIQRIQEAKDVITDEY-IKLYAKALEYSSDKF---F---PS 392 (467)
Q Consensus 320 vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~~~~~-~~~~~~~~~~~~~~~---~---p~ 392 (467)
||+|+|++ +|.+|+||++..+.+.++++||.+.+|+++|..||+++.+++.++ +++.++|++..+.+. . ..
T Consensus 293 vd~R~rl~--lP~~y~GN~~~~~~~~~~~~el~~~~L~~~a~~ir~ai~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (451)
T 2rkv_A 293 VDARPAMG--VSNNYPGLLQNMTYHNSTIGEIANESLGATASRLRSELDPASMRQRTRGLATYLHNNPDKSNVSLTADAD 370 (451)
T ss_dssp EECHHHHT--CCTTCCSCCEEEEEEEEEHHHHHHSCHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHCSCCTTBCTTTTCC
T ss_pred ecccccCC--CCCCCcccceeeecccCcHHHhccchHHHHHHHHHHHhcccCchhHHHHHHHHHhcCCCccccccccccC
Confidence 99999998 899999999999999999999999999999999999999998888 999999998743221 1 11
Q ss_pred CCCcEEEeecCCCCCcccccC--CCccccceeecc-cCCCceEEEEecCC-CcEEEEEecCHHHHHHHHHHHh
Q 040186 393 MRELTIITDWLRFPFHALDFG--WGPRLSGAVLLA-TPVPETAFLMLDLE-GGYLVRLGIEKKHVQNLINNFN 461 (467)
Q Consensus 393 ~~~~~~~ssw~~~~~~~~DFG--~G~P~~~~~~~~-~~~~g~~~ilp~~~-g~~~v~v~L~~~~m~~l~~~~~ 461 (467)
.+.++++|||+++++|++||| ||+| ++++.+. .+.+|.++++|..+ ||++|.|+|++++|++|++|.+
T Consensus 371 ~~~~~~~ssw~~~~~y~~DFG~gwG~P-~~v~~~~~~~~~g~~~~~p~~~~ggi~v~v~L~~~~m~~f~~d~e 442 (451)
T 2rkv_A 371 PSTSVMLSSWAKVGLWDYDFGLGLGKP-ETVRRPIFEPVESLMYFMPKKPDGEFCAALSLRDEDMDRLKADKE 442 (451)
T ss_dssp TTTCEEEEECTTCCGGGCCTTCSSCSC-SEEECCBCSCCTTEEEECCCCTTSCEEEEEEEEHHHHHHHHHCHH
T ss_pred CCCCEEEeccccCCccccccCCCCCCc-eEEEcCCccCCCCEEEEecCCCCCCEEEEEEeCHHHHHHHhcCHH
Confidence 245799999999999999998 7999 9987543 34688999998765 9999999999999999999865
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=99.09 E-value=1.1e-08 Score=103.11 Aligned_cols=294 Identities=13% Similarity=0.073 Sum_probs=164.2
Q ss_pred CceeeCCcccccc--Ccc-ccEEEEecCCCCCCCCChhHHHHHHHHHHHHhhhccccCCeeeeeCCCCcEEEEeCCCCeE
Q 040186 23 IQTIELSGLDRIS--PAM-LYTIFFFKSQLKNDGENPIELERAKRALQRVLVSWYPAAGRFKFNETTGKLEIDCNNKGVT 99 (467)
Q Consensus 23 ~~~~~LS~lD~~~--~~~-~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGri~~~~~~G~~~i~~~~~gv~ 99 (467)
...+|||++.+.+ ..| +...+-++. . .+.+.|++++.+++..+|.|-.++...+ +|.+++......+.
T Consensus 5 ~~~~pls~~Q~~~~~~~y~~~~~~~l~g--~------ld~~~l~~A~~~lv~rh~~LRt~f~~~~-~~~~q~v~~~~~~~ 75 (422)
T 1q9j_A 5 SVIRKLSHSEEVFAQYEVFTSMTIQLRG--V------IDVDALSDAFDALLETHPVLASHLEQSS-DGGWNLVADDLLHS 75 (422)
T ss_dssp SEEEECCHHHHHHHHTTCEEEEEEEEES--C------CCHHHHHHHHHHHHHHCGGGSEEEEECT-TSSEEEEECCSSSC
T ss_pred ceeecCCHHHHHHHhcCceEEEEEEEec--C------CCHHHHHHHHHHHHHhCccceEEEEecC-CcceeeeccCCCCC
Confidence 5689999999875 333 344444443 2 5689999999999999999999987655 44444444332222
Q ss_pred -EEEEEccCChhhhcCCCCCchhhhcccCCCCCCCCCCCCCeEEEEEEEeecCeEEEeccceeeecccccHHHHHHHHHH
Q 040186 100 -MITAVTESKLEEFGCLHEYKPCYEKLVPKLSQSSDVSENPLVLVQITSFACGGISIGLGGSHALFDGVGAFKFLASWAH 178 (467)
Q Consensus 100 -f~~a~~d~~~~~l~~~~~p~~~~~~l~p~~~~~~~~~~~Pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~ 178 (467)
+.+.+ +....... .+.+ . ...-+ .+.|++++.+.. .+++..|.+.+||.++||.|+..|++.|.+
T Consensus 76 ~~~~~d-------~~~~~~~~-~~~~---~-~~~~d-~~~pl~r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~ 141 (422)
T 1q9j_A 76 GICVID-------GTAATNGS-PSGN---A-ELRLD-QSVSLLHLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFS 141 (422)
T ss_dssp CCEEEC-----------------------C-CCCCC-TTTCSEEEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHH
T ss_pred ceEEEE-------CCCCCcch-hhhc---c-cCccC-CCCCcEEEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHH
Confidence 22211 11110000 0111 0 01112 467899988877 677899999999999999999999999999
Q ss_pred Hhc-----CCCCCCCCCCCCC--ccccccccCCCCCCCCCCcccccccchhhhhhhhhccCCccccccCccccccccccc
Q 040186 179 VSS-----GKDESDLTFPNHS--RDALLHAISSPNYACPDTSAASIYEQDHVAAIQDLYRIPMQAMASDDRCWKTALSKF 251 (467)
Q Consensus 179 ~~r-----g~~~~~~~~P~~d--r~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 251 (467)
.++ |.+......+..+ ......+ .......+... -...+.+++... +. ..++. . .
T Consensus 142 ~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~------~~~~~~W~~~l~-~~--~~lp~---~-----~ 203 (422)
T 1q9j_A 142 RYTDAVTTGDPGPITPQPTPLSMEAVLAQR-GIRKQGLSGAE------RFMSVMYAYEIP-AT--ETPAV---L-----A 203 (422)
T ss_dssp HHHHHHHSSSCCCCCCCCCCBCHHHHHHHS-SCCC-----CT------TSSTTTTCC-----------------------
T ss_pred HHHHhhccCCCCCCCCCCCCCCHHHHHHhc-CCcccccchhh------hhhhhhhcccCC-Cc--ccCCC---C-----C
Confidence 887 3332220012111 1111111 00000000000 000111110100 00 00000 0 0
Q ss_pred CCCCCCCCeEEEEEEeCHHHHHHHHHHhhhcCCCccccHHHHHHHHHHHHHHHHhcCCCCCcEEEEEEEeCCCCCCCCCC
Q 040186 252 GQIDPQGELVLVTLSVKKVVVDAWKGMAIESGNLTRCSTFDVLCAHVWKARVMALKLHPRTNICLQFPVDSRSRLRPPLG 331 (467)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp 331 (467)
+ .........+.+.++.+..++|++.|.+.+ +|.+.++.|.+...+.+-+. .......+..+++.|....|+.+
T Consensus 204 ~-~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~----~t~~~~l~aa~~~~l~r~~~-~~~~~v~~g~~~~~R~~~~~~~~ 277 (422)
T 1q9j_A 204 H-PGLPQAVPVTRLWLSKQQTSDLMAFGREHR----LSLNAVVAAAILLTEWQLRN-TPHVPIPYVYPVDLRFVLAPPVA 277 (422)
T ss_dssp --CCSBCCCCEEEECCCHHHHHHHHHHHTTTT----CCHHHHHHHHHHHHHHHHHT-CSSCCEEEEEEEETTTTSSSCCC
T ss_pred C-CCCCCCccceEEEeCHHHHHHHHHHHHHhC----CCHHHHHHHHHHHHHHhccc-CCCceEEEeeeeecccccCCCCC
Confidence 0 011223467888999999999999998765 89999999987766665422 23467899999999998765432
Q ss_pred ----CCCccceeeccccccchhhhccchHHHHHHHHHHHHhh
Q 040186 332 ----ENFTGNAFVLASVSCSVKDLLKEPLHQTIQRIQEAKDV 369 (467)
Q Consensus 332 ----~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~ 369 (467)
++..|..+.. +++.. +.++.+++..+++.+.+
T Consensus 278 ~~~~~~~vG~f~n~----lp~~~--~~~~~~~l~~v~~~~~~ 313 (422)
T 1q9j_A 278 PTEATNLLGAASYL----AEIGP--NTDIVDLASDIVATLRA 313 (422)
T ss_dssp TTTBSCCEEEEEEE----ECCCS--SCCHHHHHHHHHHHHHH
T ss_pred hhhhhhhheeeeee----eeccC--CCCHHHHHHHHHHHHHH
Confidence 2344444422 22211 34567777777777655
No 7
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.73 E-value=4.2e-06 Score=84.54 Aligned_cols=266 Identities=15% Similarity=0.056 Sum_probs=149.4
Q ss_pred hHHHHHHHHHHHHhhhccccCCeeeeeCCCCcEEEEeCCCCeEEEEEEccCChhhhcCCCCCchhhhcccCC-CCCCCCC
Q 040186 57 IELERAKRALQRVLVSWYPAAGRFKFNETTGKLEIDCNNKGVTMITAVTESKLEEFGCLHEYKPCYEKLVPK-LSQSSDV 135 (467)
Q Consensus 57 ~~~~~L~~sL~~~L~~~p~LaGri~~~~~~G~~~i~~~~~gv~f~~a~~d~~~~~l~~~~~p~~~~~~l~p~-~~~~~~~ 135 (467)
.+.+.|++++.+++..+|.|--++... +| .+. ....+.+.+.+ +.....+...+.+++-. ....-+.
T Consensus 33 ld~~~L~~A~~~lv~rh~~LRt~f~~~--~~--~v~-~~~~~~~~~~d-------~~~~~~~~~~~~~~~~~~~~~~fdl 100 (436)
T 1l5a_A 33 LDTTLLLRALHLTVSEIDLFRARFSAQ--GE--LYW-HPFSPPIDYQD-------LSIHLEAEPLAWRQIEQDLQRSSTL 100 (436)
T ss_dssp CCHHHHHHHHHHHHHTCGGGGEEECTT--CC--EEE-CSSCCCCEEEE-------CTTCTTHHHHHHHHHHHHHTSCCCC
T ss_pred CCHHHHHHHHHHHHHHhheeEEEEEec--CC--eEC-CCcCCCccEEe-------CCCCCCHHHHHHHHHHHHhcCCCCc
Confidence 569999999999999999998877643 35 332 22222222222 21110111111111100 0001123
Q ss_pred CCCCeEEEEEEEeecCeEEEeccceeeecccccHHHHHHHHHHHhc----CCCCCCCCCCCCCccccccccCCCCCCCCC
Q 040186 136 SENPLVLVQITSFACGGISIGLGGSHALFDGVGAFKFLASWAHVSS----GKDESDLTFPNHSRDALLHAISSPNYACPD 211 (467)
Q Consensus 136 ~~~Pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r----g~~~~~~~~P~~dr~~l~~~~~~~~~~~p~ 211 (467)
...|++++.+....++...|.+.+||.++||.|+..|++.+.+.+. |.+... ..+.+ ++.+.....-. ....
T Consensus 101 ~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~-~~~~~-~~~~~~~~~~~--~~~~ 176 (436)
T 1l5a_A 101 IDAPITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTA-AFKPY-QSYLEEEAAYL--TSHR 176 (436)
T ss_dssp BTSCSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCC-CCCCH-HHHHHHHHHHH--TSHH
T ss_pred CCCCCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCC-CccCH-HHHHHHHHHhh--ccHh
Confidence 4568998888777677899999999999999999999999999887 444321 01111 11110000000 0000
Q ss_pred Ccccccccchhhhhhhhh-ccCCccccccCcccccccccccCCCCCCCCeEEEEEEeCHHHHHHHHHHhhhcCCCccccH
Q 040186 212 TSAASIYEQDHVAAIQDL-YRIPMQAMASDDRCWKTALSKFGQIDPQGELVLVTLSVKKVVVDAWKGMAIESGNLTRCST 290 (467)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~~~~S~ 290 (467)
. ....+.++++ ...+. . ..++... ...........+.++.+..++|++.|...+ +|.
T Consensus 177 ~-------~~~~~~W~~~l~~~~~----~------~~lp~~~-~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~----~t~ 234 (436)
T 1l5a_A 177 Y-------WQDKQFWQGYLREAPD----L------TLTSATY-DPQLSHAVSLSYTLNSQLNHLLLKLANANQ----IGW 234 (436)
T ss_dssp H-------HHHHHHHHHHHHTSCC----C------CBCCTTC-CGGGCCEEEEEEECCHHHHHHHHHHHHHTT----CCH
T ss_pred H-------HHHHHHHHHHhcCCCC----c------ccCCCCC-CCCcccceeeEEecCHHHHHHHHHHHHHhC----CCH
Confidence 0 0011111111 11111 0 0000000 011234567889999999999999999875 899
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEEEeCCCCCCCCCCCCCccceeeccccccchhhhccchHHHHHHHHHHHHhh
Q 040186 291 FDVLCAHVWKARVMALKLHPRTNICLQFPVDSRSRLRPPLGENFTGNAFVLASVSCSVKDLLKEPLHQTIQRIQEAKDV 369 (467)
Q Consensus 291 ~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~ 369 (467)
+.++.|.+-..+.+- .. ....+..+++.|..- --.+-.|+++......+.+.. +.++.+++..+++.+.+
T Consensus 235 ~~~l~aa~~~~L~~~---~g-~dv~ig~~~~~R~~~---~~~~~vG~f~n~lplr~~~~~--~~t~~~~l~~v~~~~~~ 304 (436)
T 1l5a_A 235 PDALVALCALYLESA---EP-DAPWLWLPFMNRWGS---VAANVPGLMVNSLPLLRLSAQ--QTSLGNYLKQSGQAIRS 304 (436)
T ss_dssp HHHHHHHHHHHHHHH---ST-TCCEEEEEECCCTTS---GGGGSCSCCCEEEEEECCCCT--TCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh---hC-CceEEeeecccCCCh---HHhcCcceEEEEEEEEEecCC--CCCHHHHHHHHHHHHHH
Confidence 999998866555544 23 668999999999651 224556666554444333322 34677777777777654
No 8
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.67 E-value=1.8e-06 Score=89.61 Aligned_cols=292 Identities=13% Similarity=0.104 Sum_probs=166.7
Q ss_pred CceeeCCcccccc----------Ccc-ccEEEEecCCCCCCCCChhHHHHHHHHHHHHhhhccccCCeeeeeCCCCcE-E
Q 040186 23 IQTIELSGLDRIS----------PAM-LYTIFFFKSQLKNDGENPIELERAKRALQRVLVSWYPAAGRFKFNETTGKL-E 90 (467)
Q Consensus 23 ~~~~~LS~lD~~~----------~~~-~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGri~~~~~~G~~-~ 90 (467)
...+|||..-+-+ ..| +...+-++.. .+.+.|++++.+++..+|.|--++...+ |.+ +
T Consensus 94 ~~~~pls~~Q~~~~~~~~~~~~~~~y~~~~~~~l~g~--------ld~~~l~~A~~~lv~rh~~LRt~f~~~~--~~~~q 163 (520)
T 2jgp_A 94 QAYYPVSSAQKRMYILDQFEGVGISYNMPSTMLIEGK--------LERTRVEAAFQRLIARHESLRTSFAVVN--GEPVQ 163 (520)
T ss_dssp CSSEECCHHHHHHHHHHHHTCCTTTTBCCEEEEEEEC--------CCHHHHHHHHHHHHHHCGGGGEEEEEET--TEEEE
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCCcccceEEEEECCC--------CCHHHHHHHHHHHHHHhHhheeEEEeeC--CEEEE
Confidence 4678999876431 123 4444544432 5699999999999999999988887653 443 3
Q ss_pred EEeCCCCeEEEEEEccCChhhhcCCCCCchhhhcccCCCCCCCCCCCCCeEEEEEEEeecCeEEEeccceeeecccccHH
Q 040186 91 IDCNNKGVTMITAVTESKLEEFGCLHEYKPCYEKLVPKLSQSSDVSENPLVLVQITSFACGGISIGLGGSHALFDGVGAF 170 (467)
Q Consensus 91 i~~~~~gv~f~~a~~d~~~~~l~~~~~p~~~~~~l~p~~~~~~~~~~~Pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~ 170 (467)
+......+.+.+.+. +-+++. .+.+..- .+ -+....|++++.+....++...|.+.+||.++||.|+.
T Consensus 164 ~v~~~~~~~~~~~~~--~~~~~~-------~~~~~~~-~~--fdl~~~pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~ 231 (520)
T 2jgp_A 164 NIHEDVPFALAYSEV--TEEEAR-------ELVSSLV-QP--FDLEVAPLIRVSLLKIGEDRYVLFTDMHHSISDGVSSG 231 (520)
T ss_dssp EECSCCCCCCEEEEC--CHHHHH-------HHHHHTC-CC--CCTTSSCCEEEEEEEEETTEEEEEEEEBGGGCCHHHHH
T ss_pred EECCCCCCceEEEeC--CHHHHH-------HHHHHhc-CC--CCCCCCcceeEEEEEEcCCcEEEEEEccceeecHhHHH
Confidence 322322222222221 111110 0111110 01 12345789988887776778999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCCccccc--cccCCCCCCCCCCcccccccchhhhhhhhh-ccCCccccccCccccccc
Q 040186 171 KFLASWAHVSSGKDESDLTFPNHSRDALL--HAISSPNYACPDTSAASIYEQDHVAAIQDL-YRIPMQAMASDDRCWKTA 247 (467)
Q Consensus 171 ~fl~~wa~~~rg~~~~~~~~P~~dr~~l~--~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 247 (467)
.|++.+.+.++|..... .|..-++... .... ..+.. ....+.++++ ...+.. ..++. ..
T Consensus 232 ~l~~el~~~Y~~~~l~~--~~~~~~d~~~~~~~~~----~~~~~-------~~~~~yW~~~l~~~~~~-~~lp~---~~- 293 (520)
T 2jgp_A 232 ILLAEWVQLYQGDVLPE--LRIQYKDFAVWQQEFS----QSAAF-------HKQEAYWLQTFADDIPV-LNLPT---DF- 293 (520)
T ss_dssp HHHHHHHHHHTTCCCCC--CSCCHHHHHHHHHHHT----TSHHH-------HHHHHHHHHHTSSCCCC-CCCCC---SS-
T ss_pred HHHHHHHHHHccCCCCC--CCCCHHHHHHHHHHhh----cChhh-------HHHHHHHHHHhCCCCCc-CCCCC---CC-
Confidence 99999999999875432 2211111110 0000 00000 0011111111 111100 00000 00
Q ss_pred ccccCCCCCCCCeEEEEEEeCHHHHHHHHHHhhhcCCCccccHHHHHHHHHHHHHHHHhcCCCCCcEEEEEEEeCCCCCC
Q 040186 248 LSKFGQIDPQGELVLVTLSVKKVVVDAWKGMAIESGNLTRCSTFDVLCAHVWKARVMALKLHPRTNICLQFPVDSRSRLR 327 (467)
Q Consensus 248 l~~~~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~ 327 (467)
+. + ...........+.++.+..++|++.|.+.+ +|.+.++.|.+-..+.+-. ......+..++++|..-
T Consensus 294 -~~-~-~~~~~~~~~~~~~l~~~~~~~l~~~a~~~~----~T~~~~l~aa~a~~L~~~~---~~~dv~~g~~~~gR~~~- 362 (520)
T 2jgp_A 294 -TR-P-STQSFAGDQCTIGAGKALTEGLHQLAQATG----TTLYMVLLAAYNVLLAKYA---GQEDIIVGTPITGRSHA- 362 (520)
T ss_dssp -CC-C-SSCCCBEEEEEEECCHHHHHHHHHHHHHHT----CCHHHHHHHHHHHHHHHHH---TCSCEEEEEEECCCCSG-
T ss_pred -CC-C-CCCCCCccEEEEeCCHHHHHHHHHHHHHcC----CCHHHHHHHHHHHHHHHhc---CCCCeEEEeccCCCCch-
Confidence 00 0 012234567889999999999999998765 8999999987665555543 23668999999999752
Q ss_pred CCCCCCCccceeeccccccchhhhccchHHHHHHHHHHHHhh
Q 040186 328 PPLGENFTGNAFVLASVSCSVKDLLKEPLHQTIQRIQEAKDV 369 (467)
Q Consensus 328 p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~ 369 (467)
--++-.|+++......+.+.. +.++.+++..|++.+.+
T Consensus 363 --~~~~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~~~~~~ 400 (520)
T 2jgp_A 363 --DLEPIVGMFVNTLAMRNKPQR--EKTFSEFLQEVKQNALD 400 (520)
T ss_dssp --GGTTCCSCCCEEEEEEECCCT--TSBHHHHHHHHHHHHHH
T ss_pred --hhhccEEeeeeeeeEEecCCC--CCCHHHHHHHHHHHHHH
Confidence 124556766555444443322 35677777777776654
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.58 E-value=1.1e-06 Score=90.48 Aligned_cols=295 Identities=14% Similarity=0.062 Sum_probs=162.0
Q ss_pred CceeeCCcccccc----C----ccccEEEEecCCCCCCCCChhHHHHHHHHHHHHhhhccccCCeeeeeCCCCcEEEEeC
Q 040186 23 IQTIELSGLDRIS----P----AMLYTIFFFKSQLKNDGENPIELERAKRALQRVLVSWYPAAGRFKFNETTGKLEIDCN 94 (467)
Q Consensus 23 ~~~~~LS~lD~~~----~----~~~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGri~~~~~~G~~~i~~~ 94 (467)
...+|||+.-+-+ . ......+.|+..+. .+.+.|++++.+++..+|.|--++... +|.+. ...
T Consensus 11 ~~~~Pls~~Q~~~~~~~~~~~~~~y~~~~~~~l~g~------ld~~~L~~A~~~lv~rh~~LRt~f~~~--~~~~~-~v~ 81 (493)
T 4hvm_A 11 PGLRRASFLQRGAWRWLREAPPAAAFAARGLLGSGR------IDDDRLAAAADEVLDAFPLLRVNFVDD--DGLWM-RTR 81 (493)
T ss_dssp -CEEECCHHHHHHHHHHTTSCGGGGEEEEEEEEESS------CCHHHHHHHHHHHHHHCGGGGEEEEES--SSEEE-EEC
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCcceeEEEEEEeCC------CCHHHHHHHHHHHHHhchhceeEEEcc--CCEEE-Eec
Confidence 5689999887531 1 11233444454333 579999999999999999998888764 46655 443
Q ss_pred CCCeEEEEEEccCChhhhcCCCCCchhhhcccCC-CCCCCCCCCCCeEEEEEEEeecCeEEEeccceeeecccccHHHHH
Q 040186 95 NKGVTMITAVTESKLEEFGCLHEYKPCYEKLVPK-LSQSSDVSENPLVLVQITSFACGGISIGLGGSHALFDGVGAFKFL 173 (467)
Q Consensus 95 ~~gv~f~~a~~d~~~~~l~~~~~p~~~~~~l~p~-~~~~~~~~~~Pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl 173 (467)
.+.+.+.+.+. .....+...+.+++-. ....-+....|++++.+....++...|.+.+||.++||.|+..++
T Consensus 82 ~~~~~~~~~d~-------~~~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~ 154 (493)
T 4hvm_A 82 ENADALVRSDL-------RGHPDPQARCVELLRADRDRPTDPERDPLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVL 154 (493)
T ss_dssp SCCCCEEEEEC-------TTSSSHHHHHHHHHHHHHSSCCCTTTSCSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHH
T ss_pred CCCCCceEEEC-------CCCCchHHHHHHHHHHHhcCCCCCCCCCeEEEEEEEECCCcEEEEEecchhhccHHHHHHHH
Confidence 32255544332 1110010111111100 000112345689998887777777899999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCCCCCCccccccccCCCCCC--CCCCcccccccchhhhhhhhh-ccCCccccccCcccccccccc
Q 040186 174 ASWAHVSSGKDESDLTFPNHSRDALLHAISSPNYA--CPDTSAASIYEQDHVAAIQDL-YRIPMQAMASDDRCWKTALSK 250 (467)
Q Consensus 174 ~~wa~~~rg~~~~~~~~P~~dr~~l~~~~~~~~~~--~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~ 250 (467)
+.+.+.+.|.... .+. ++..... . . ...... .....+.++++ ...+. + ..
T Consensus 155 ~~l~~~Y~g~~~~---~~~--~~~~~~~----~-~~~~~~~~~----~~~~~~~W~~~l~~~~~-----------l--~~ 207 (493)
T 4hvm_A 155 GAVWQAYYGRFRP---AQY--RDFAEVA----D-FHPLDRETV----RVARHRWWSRRLPALPV-----------R--GG 207 (493)
T ss_dssp HHHHHHHTTCCCG---GGS--BCGGGTT----T-CCTTCSHHH----HHHHHHHHHHHGGGSCC-----------C--C-
T ss_pred HHHHHHhCCCCCC---cCH--HHHHHHH----h-hhhcccChh----hHHHHHHHHHhccCCCC-----------C--CC
Confidence 9999999776431 111 1111100 0 0 000000 00111211111 11110 0 00
Q ss_pred cCCCCCCCCeEEEEEEeCHHHHHHHHHHhhhcCCCcccc--HHHHHHHHHHHHHHHHhcC--------CCCCcEEEEEEE
Q 040186 251 FGQIDPQGELVLVTLSVKKVVVDAWKGMAIESGNLTRCS--TFDVLCAHVWKARVMALKL--------HPRTNICLQFPV 320 (467)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~~~~S--~~d~l~A~lW~~~~~ar~~--------~~~~~~~l~~~v 320 (467)
.+ .+........+.++.+..++|++.|.+.+ +| .+.++.|.+-..+.+-+.. .......+..++
T Consensus 208 ~~--~~~~~~~~~~~~l~~~~~~~l~~~a~~~~----vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~dv~~g~~~ 281 (493)
T 4hvm_A 208 DG--GPVGPPETSRLRVPGSRWQALTEPGGPLG----GNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDSLYLSTEV 281 (493)
T ss_dssp --------CCEEEEEEEEHHHHHHHHCC----------CHHHHHHHHHHHHHHHC----------------CEEEEEEEE
T ss_pred CC--CCCCCCeeEEEEcCHHHHHHHHHHHHHcC----CCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCCEEEEeec
Confidence 10 11222778889999999999998888764 78 9999998866555443100 234678999999
Q ss_pred eCCCCCCCCCCCCCccceeeccccccchhhhccchHHHHHHHHHHHHhh
Q 040186 321 DSRSRLRPPLGENFTGNAFVLASVSCSVKDLLKEPLHQTIQRIQEAKDV 369 (467)
Q Consensus 321 d~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~ 369 (467)
++|.. +--.+.+|+++......+......+.++.+++..+++.+.+
T Consensus 282 ~gR~~---~~~~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~ 327 (493)
T 4hvm_A 282 DLRDH---LQLGSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLD 327 (493)
T ss_dssp EHHHH---TTCCSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHH
T ss_pred cCCCC---cchhcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHH
Confidence 99965 22356677776655544444332245677777777776554
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.38 E-value=1.5e-05 Score=81.07 Aligned_cols=305 Identities=11% Similarity=0.034 Sum_probs=165.7
Q ss_pred CceeeCCcccccc--C-----ccccEEEEecCCCCCCCCChhHHHHHHHHHHHHhhhccccCCeeeeeCCCCcEEEEeC-
Q 040186 23 IQTIELSGLDRIS--P-----AMLYTIFFFKSQLKNDGENPIELERAKRALQRVLVSWYPAAGRFKFNETTGKLEIDCN- 94 (467)
Q Consensus 23 ~~~~~LS~lD~~~--~-----~~~~~~~~f~~~~~~~~~~~~~~~~L~~sL~~~L~~~p~LaGri~~~~~~G~~~i~~~- 94 (467)
...+|||+..+++ . ......+.|+..+. .+.+.|+++|.+++..++.|--++.... .+-..+...
T Consensus 15 ~~~~pls~~Q~~~~~~~~~~~~~y~~~~~~~l~g~------ld~~~L~~Al~~lv~rh~~LRt~f~~~~-~~~~q~v~~~ 87 (466)
T 2xhg_A 15 AGNVPLTPIQKWFFGKNFTNTGHWNQSSVLYRPEG------FDPKVIQSVMDKIIEHHDALRMVYQHEN-GNVVQHNRGL 87 (466)
T ss_dssp CEECCCCHHHHHHHHTTCTTTTCBEEEEEEEETTC------CCHHHHHHHHHHHHHHSGGGGEEEECGG-GCCEEEECCS
T ss_pred CCCCCCCHHHHHHHhCCCCCcCcceeEEEEEcCCC------CCHHHHHHHHHHHHHhChHhheEEecCC-Cceeeecccc
Confidence 5688999877642 1 11223344454333 5799999999999999999988887543 222333332
Q ss_pred -CCCeEEEEEEccCChhhhcCCCCCchhhhcccCCCCCCCCCCCCCeEEEEEEEeecCeEEEeccceeeecccccHHHHH
Q 040186 95 -NKGVTMITAVTESKLEEFGCLHEYKPCYEKLVPKLSQSSDVSENPLVLVQITSFACGGISIGLGGSHALFDGVGAFKFL 173 (467)
Q Consensus 95 -~~gv~f~~a~~d~~~~~l~~~~~p~~~~~~l~p~~~~~~~~~~~Pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl 173 (467)
...+.+.+.+.. ........++.+.-.....-+....|++++.+....++.. |-+.+||.++||.|+..|+
T Consensus 88 ~~~~~~~~~~d~~-------~~~~~~~~~~~~~~~~~~~fdl~~~pl~r~~l~~~~~~~~-l~l~~HH~i~Dg~S~~~l~ 159 (466)
T 2xhg_A 88 GGQLYDFFSYNLT-------AQPDVQQAIEAETQRLHSSMNLQEGPLVKVALFQTLHGDH-LFLAIHHLVVDGISWRILF 159 (466)
T ss_dssp SSCCCEEEEEECT-------TCSCHHHHHHHHHHHHHTTCCTTTCCCEEEEEEEETTEEE-EEEEEEGGGCCHHHHHHHH
T ss_pred ccccceeEEEecC-------CcccHHHHHHHHHHHHHhccCCCCCCeEEEEEEEcCCCCE-EEEEeeeeeechhhHHHHH
Confidence 223344333221 1100011111110000001124467899988877665444 6799999999999999999
Q ss_pred HHHHHHhc----CCCCCCCCCCCCCccccc---cccCCCCCCCCCCcccccccchhhhhhhhh-ccCCccccccCccccc
Q 040186 174 ASWAHVSS----GKDESDLTFPNHSRDALL---HAISSPNYACPDTSAASIYEQDHVAAIQDL-YRIPMQAMASDDRCWK 245 (467)
Q Consensus 174 ~~wa~~~r----g~~~~~~~~P~~dr~~l~---~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 245 (467)
+.+.+.++ |.+......+..-++... ... ..+.. ....+.++++ ...+.. .++. .
T Consensus 160 ~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~-----~~~~~-------~~~~~~W~~~l~~~~~~--~lp~---~ 222 (466)
T 2xhg_A 160 EDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYA-----NEADL-------LSEIPYWESLESQAKNV--SLPK---D 222 (466)
T ss_dssp HHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHT-----TSHHH-------HTTHHHHHHHHHHCCCC--CCCC---S
T ss_pred HHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHh-----cCccc-------hhhhHHHHHhhccCCcc--cCCc---c
Confidence 99998885 443221001111111110 000 00000 0011111111 111110 0100 0
Q ss_pred ccccccCCCCCCCCeEEEEEEeCHHHHHHHHHHhhhcCCCccccHHHHHHHHHHHHHHHHhcCCCCCcEEEEEEEeCCCC
Q 040186 246 TALSKFGQIDPQGELVLVTLSVKKVVVDAWKGMAIESGNLTRCSTFDVLCAHVWKARVMALKLHPRTNICLQFPVDSRSR 325 (467)
Q Consensus 246 ~~l~~~~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~r 325 (467)
. ..............+.++.+..++|++.+... ..+|.++++.|.+-..+.+-. ......+..+++.|..
T Consensus 223 ~----~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~---~~~t~~~~llaa~~~~l~~~~---~~~dv~ig~~~~gR~~ 292 (466)
T 2xhg_A 223 Y----EVTDCKQKSVRNMRIRLHPEETEQLLKHANQA---YQTEINDLLLAALGLAFAEWS---KLAQIVIHLEGHGRED 292 (466)
T ss_dssp S----CCSSCBGGGEEEEEEECCHHHHHHHHHTGGGT---TTCCHHHHHHHHHHHHHHHHH---CCSEEEEEEEECCCCS
T ss_pred c----cccccccccceEEEEEcCHHHHHHHHHHhHHh---hCCCHHHHHHHHHHHHHHHHh---CCCceEEEecCCCCCc
Confidence 0 00001123456788999999999999887542 137899999988766666543 2356899999999976
Q ss_pred CCC-CCCCCCccceeeccccccchhhhccchHHHHHHHHHHHHhhCC
Q 040186 326 LRP-PLGENFTGNAFVLASVSCSVKDLLKEPLHQTIQRIQEAKDVIT 371 (467)
Q Consensus 326 l~p-~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai~~~~ 371 (467)
..+ +--.+-+|+.+......+.+.. +.++.+++..|++.+..+.
T Consensus 293 ~~~~~~~~~~vG~f~n~lplr~~~~~--~~~~~~~l~~v~~~~~~~~ 337 (466)
T 2xhg_A 293 IIEQANVARTVGWFTSQYPVLLDLKQ--TAPLSDYIKLTKENMRKIP 337 (466)
T ss_dssp CSTTCCCTTCCSCCCEEEEEEEECSC--CCSHHHHHHHHHHHHHHSG
T ss_pred cccCCCccccccceeeeccEEEecCC--CCCHHHHHHHHHHHHHhCc
Confidence 421 1224556666554444443322 4578889999999887763
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=98.19 E-value=5.5e-05 Score=87.17 Aligned_cols=272 Identities=10% Similarity=0.024 Sum_probs=154.4
Q ss_pred hHHHHHHHHHHHHhhhccccCCeeeeeCCCC-cEEEEeCCCCeEEEEEEccCChhhhcCCCCC--chhhhcccCC-CCCC
Q 040186 57 IELERAKRALQRVLVSWYPAAGRFKFNETTG-KLEIDCNNKGVTMITAVTESKLEEFGCLHEY--KPCYEKLVPK-LSQS 132 (467)
Q Consensus 57 ~~~~~L~~sL~~~L~~~p~LaGri~~~~~~G-~~~i~~~~~gv~f~~a~~d~~~~~l~~~~~p--~~~~~~l~p~-~~~~ 132 (467)
.+.+.|++++.+++..++.|--++.... .| -.++......+.+.+.+ +.....+ ...++.++-. ....
T Consensus 47 ld~~~l~~A~~~lv~rH~~LRt~f~~~~-~~~p~Q~v~~~~~~~~~~~d-------~~~~~~~~~~~~~~~~~~~~~~~~ 118 (1304)
T 2vsq_A 47 LNIKCLEESMNVIMDRYDVFRTVFIHEK-VKRPVQVVLKKRQFHIEEID-------LTHLTGSEQTAKINEYKEQDKIRG 118 (1304)
T ss_dssp CCHHHHHHHHHHHHHHCGGGGEEEECSS-CSSCEEEEESCCCCCEEEEE-------CTTSCHHHHHHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHhhhhceEEEEEcC-CCeEEEEECCCCCCceEEEE-------CCCCCchhHHHHHHHHHHHHhcCC
Confidence 5699999999999999999988887554 33 34554444334443322 2111000 0011111100 0001
Q ss_pred CCCCCCCeEEEEEEEeecCeEEEeccceeeecccccHHHHHHHHHHHhcC----CCCCCCCCCCCCccccccccCCCCCC
Q 040186 133 SDVSENPLVLVQITSFACGGISIGLGGSHALFDGVGAFKFLASWAHVSSG----KDESDLTFPNHSRDALLHAISSPNYA 208 (467)
Q Consensus 133 ~~~~~~Pll~vQvt~f~~GG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg----~~~~~~~~P~~dr~~l~~~~~~~~~~ 208 (467)
-+....|++++.+....++...|.+.+||.++||.|+..+++.+.+.+++ .+......+ .-++..... .
T Consensus 119 fdl~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~-~y~d~~~~~------~ 191 (1304)
T 2vsq_A 119 FDLTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVK-PYKDYIKWL------E 191 (1304)
T ss_dssp CCTTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCC-CTHHHHHHH------H
T ss_pred CCCCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcc-cHHHHHHHH------h
Confidence 12446799999998877778999999999999999999999999998864 332210011 111111100 0
Q ss_pred CCCCcccccccchhhhhhhhh-ccCCccccccCcccccccccccCCCCCCCCeEEEEEEeCHHHHHHHHHHhhhcCCCcc
Q 040186 209 CPDTSAASIYEQDHVAAIQDL-YRIPMQAMASDDRCWKTALSKFGQIDPQGELVLVTLSVKKVVVDAWKGMAIESGNLTR 287 (467)
Q Consensus 209 ~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~~~ 287 (467)
.... ....+.++++ ...+.. ..++.. . .............+.++++..++|++.|.+.+
T Consensus 192 ~~~~-------~~~~~yW~~~L~~~~~~-~~lp~~-------~-~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~~---- 251 (1304)
T 2vsq_A 192 KQDK-------QASLRYWREYLEGFEGQ-TTFAEQ-------R-KKQKDGYEPKELLFSPSEAETKAFTELAKSQH---- 251 (1304)
T ss_dssp TSCH-------HHHHHHHHHHHTTCCCC-CTTTTT-------C-CCSSCCCCEEEEEECCCHHHHHHHHHHHHHTT----
T ss_pred cchh-------hHHHHHHHHHhCCCCcc-ccCCCC-------C-CccccccCcceEEEecCHHHHHHHHHHHHHcC----
Confidence 0000 0111211111 111110 001000 0 00012234567788899999999999999875
Q ss_pred ccHHHHHHHHHHHHHHHHhcCCCCCcEEEEEEEeCCCCCCCCCCCCCccceeeccccccchhhhccchHHHHHHHHHHHH
Q 040186 288 CSTFDVLCAHVWKARVMALKLHPRTNICLQFPVDSRSRLRPPLGENFTGNAFVLASVSCSVKDLLKEPLHQTIQRIQEAK 367 (467)
Q Consensus 288 ~S~~d~l~A~lW~~~~~ar~~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~~~~~~~~~~~l~~~~L~~~A~~Ir~ai 367 (467)
+|.+.++.|.+-..+.|-- ......+..+++.|..-.+.+ ++-.|+.+......+.++. +.++.++...+++..
T Consensus 252 ~T~~~vllaa~a~~L~r~t---g~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~~--~~s~~~ll~~v~~~~ 325 (1304)
T 2vsq_A 252 TTLSTALQAVWSVLISRYQ---QSGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLSE--GITFNGLLKRLQEQS 325 (1304)
T ss_dssp CCHHHHHHHHHHHHHHHHH---TCSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECCT--TCBHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhc---CCCCEEEEEEeCCCCccchhh-hcccccceeEEEEEecCCC--CCcHHHHHHHHHHHH
Confidence 8999999887555554442 246689999999997532222 4455655544433333322 456788888888776
Q ss_pred hh
Q 040186 368 DV 369 (467)
Q Consensus 368 ~~ 369 (467)
.+
T Consensus 326 ~~ 327 (1304)
T 2vsq_A 326 LQ 327 (1304)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=98.08 E-value=0.00032 Score=72.31 Aligned_cols=374 Identities=12% Similarity=0.023 Sum_probs=183.6
Q ss_pred hhHHHHHHHHHHHHhhhccccCCeeeeeCCCCcEEEEe--C-CC-------CeEEEEEEccCChhhh----------cCC
Q 040186 56 PIELERAKRALQRVLVSWYPAAGRFKFNETTGKLEIDC--N-NK-------GVTMITAVTESKLEEF----------GCL 115 (467)
Q Consensus 56 ~~~~~~L~~sL~~~L~~~p~LaGri~~~~~~G~~~i~~--~-~~-------gv~f~~a~~d~~~~~l----------~~~ 115 (467)
+...+.||.++..+=-++|-+|+++..+. ++.....+ . ++ .-.|.+...+.+-+|+ .+.
T Consensus 72 ~~l~~~lr~AW~~lR~~hP~iA~~v~~d~-~~~~~~~Y~~~~~~~~~~~Wl~~Tf~v~~~~~t~~e~~~~~~~~r~~~~~ 150 (519)
T 3fot_A 72 QNLKEMFELALLDARFEHPECACTVSWDD-EVPAIITYESPESNESARDWARGCIHVQPTAKSALDLWSEMEEGRAAAND 150 (519)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGGCEEECCS-SSSCEEEEECCSSHHHHHHHHHHHEEEEECSCCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHHHHhhCCcceeEEeeCC-CCcccEEEecCCCHHHHHHHHHhcEEEeCCCCCHHHHHHhhhhhhccccc
Confidence 47788899999998899999999998774 44443333 1 11 1134444433444443 111
Q ss_pred CCCchhh--hcccCCCCCCCCCCCCCeEEEEEEEeecC--eEEEeccceeeecccccHHHHHHHHHHHhcCCCC--CCCC
Q 040186 116 HEYKPCY--EKLVPKLSQSSDVSENPLVLVQITSFACG--GISIGLGGSHALFDGVGAFKFLASWAHVSSGKDE--SDLT 189 (467)
Q Consensus 116 ~~p~~~~--~~l~p~~~~~~~~~~~Pll~vQvt~f~~G--G~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~--~~~~ 189 (467)
.+|.... .-+.|. . ..+.| +. + -.-|.+.+||.++||.|...|++.+-+.+..... ....
T Consensus 151 ~~p~~~~~l~~v~~~---~--~~~~~--------~p-~~~~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~ 216 (519)
T 3fot_A 151 NTPSKSIELFLLSDV---S--TDSTP--------IP-QDATVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSRE 216 (519)
T ss_dssp CCCCCSCEEEEEESS---S--STTSC--------CC-TTCEEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGG
T ss_pred CCCccceEEEEEecc---c--ccccc--------CC-CCceEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccC
Confidence 1222110 001111 0 00111 11 1 3556667899999999999999999887763210 0000
Q ss_pred CCCCC----ccccccccCCCCCCCCC-Ccccccccchhhhhhhhhcc-CCccccccCcccccccccccCCCCCCCCeEEE
Q 040186 190 FPNHS----RDALLHAISSPNYACPD-TSAASIYEQDHVAAIQDLYR-IPMQAMASDDRCWKTALSKFGQIDPQGELVLV 263 (467)
Q Consensus 190 ~P~~d----r~~l~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 263 (467)
.|.++ ...|.+.+......|.. .. ....+..+.+.. +.. ..+.+.+ + + ......-...
T Consensus 217 ~~~~~~g~E~~~L~P~~e~~~~~p~~~~~------~e~~~~~~~~~~~~~~-----~~~~~~~--P-~--~~~~~~~~~~ 280 (519)
T 3fot_A 217 MKKIQWGQEIKNLSPPVVDSLKLDINTLG------SEFDDKCTEYTSALVA-----NYKSRGM--K-F--QPGLALPRCV 280 (519)
T ss_dssp SCCCCTTTTGGGSCCCTGGGBSSCGGGCC------HHHHHHHHHHHHHHHH-----HHHSCCS--B-C--CCCCCCEEEE
T ss_pred CCcCCCCcccccCCcCHHHHhCCCCCCCC------HHHHHHHHHHHHHhhc-----CCCcccC--C-C--CCCCCCcceE
Confidence 23232 11121111000000100 00 000011111110 000 0000010 0 0 0112334567
Q ss_pred EEEeCHHHHHHHHHHhhhcCCCccccHHHHHHHHHHHHHHHHhc---CCCCCcEEEEEEEeCCCCCCCCCCCCCccceee
Q 040186 264 TLSVKKVVVDAWKGMAIESGNLTRCSTFDVLCAHVWKARVMALK---LHPRTNICLQFPVDSRSRLRPPLGENFTGNAFV 340 (467)
Q Consensus 264 ~~~~~~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar~---~~~~~~~~l~~~vd~R~rl~p~lp~~Y~GN~~~ 340 (467)
.+.|+++..++|++.|.+.. ++.+|.+.+|.|.+-.++.+... ........+.++||+|+++.++...+|||.+..
T Consensus 281 ~~~ls~~~t~~L~~~ck~~~-~~g~Tvt~~l~Aa~~~al~~~~~~~~~~~~~~~~~~~pvnlR~~l~~~~~~n~~~~~~~ 359 (519)
T 3fot_A 281 IHKLSADESIDIVKAVKTRL-GPGFTISHLTQAAIVLALLDHLKPNDLSDDEVFISPTSVDGRRWLREDIASNFYAMCQT 359 (519)
T ss_dssp EEECCHHHHHHHHHHHHHHT-CTTCCHHHHHHHHHHHHHHHHC----CCTTCCEEEEEEEECGGGBCHHHHTSCCSCCEE
T ss_pred EEEcCHHHHHHHHHHHHhcC-CCCeeHHHHHHHHHHHHHHhhcCCcccCCCccEEEEeeeeccccCCCcccccccceeee
Confidence 88999999999999999871 23489999998887777766421 112345889999999999976555678887766
Q ss_pred ccccccch----------hhhccch-HHHHHHHHHHHHhhC-CHHHHHH--------HHHHhhcccCCCCCCCCCcEEEe
Q 040186 341 LASVSCSV----------KDLLKEP-LHQTIQRIQEAKDVI-TDEYIKL--------YAKALEYSSDKFFPSMRELTIIT 400 (467)
Q Consensus 341 ~~~~~~~~----------~~l~~~~-L~~~A~~Ir~ai~~~-~~~~~~~--------~~~~~~~~~~~~~p~~~~~~~~s 400 (467)
........ +|+..+- +.++|+.+++..... ++.+++. .+.++...+..+.+ .....+|
T Consensus 360 ~~~~~v~~i~~~~~~~~~~e~~~~~~~~~~ar~l~~~y~~~~~np~i~~l~~~~k~~~~~l~~~~~~~~~~--~~tp~lS 437 (519)
T 3fot_A 360 AAVVRIENLKSITVSHKDEKELQVRALESACRNIKKSYRQWLENPFLQALGLRVHNFEASYLHAKPIPFEG--EANPLFI 437 (519)
T ss_dssp EEEEEECCGGGGCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHCSSCCCS--BCCCEEE
T ss_pred eeeeEecCccccccccchhhhhhHhHHHHHHHHHHHHhhcccCCchHHHhHHHHHHHHHHHhcccCCCCCC--ccCcccc
Confidence 54432211 1111111 567777777765542 3323332 22233321111111 3456777
Q ss_pred ecCCCCCc-ccccC---CCcccccee---ecccCCC-ceEEEEecCCCcEEEEEe-----cCHHHHHHHHHHHhhh
Q 040186 401 DWLRFPFH-ALDFG---WGPRLSGAV---LLATPVP-ETAFLMLDLEGGYLVRLG-----IEKKHVQNLINNFNNF 463 (467)
Q Consensus 401 sw~~~~~~-~~DFG---~G~P~~~~~---~~~~~~~-g~~~ilp~~~g~~~v~v~-----L~~~~m~~l~~~~~~~ 463 (467)
|.-++.=| .-.+| .|.....+. ....... ...+-+=+.+|-+.+.++ .+++.|+.|.+++.+.
T Consensus 438 slG~vd~~lp~~y~~~~~~~~~~~V~~~~~~~~~~~~~~~~~~~Tf~g~L~l~~~yn~a~~~~e~v~~~l~~v~~~ 513 (519)
T 3fot_A 438 SDGINERFIPHEIKQTATGENVLSVESIDFVVNQSLPYLAIRLDSWRDASTLNIIYNDANYTEAEVQKYLQSIVEF 513 (519)
T ss_dssp EEEEGGGTSCSEEEETTTTEEEEEEEEEEEEECCCSSSCEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHH
T ss_pred cCCccccccchhhccccCCCCceEEEEEEEEccccCCceEEEEEEECCEEEEEEEeccccCCHHHHHHHHHHHHHH
Confidence 77666511 22444 233212221 1111111 111111122244555554 4678999999888764
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=69.45 E-value=2.2 Score=38.09 Aligned_cols=45 Identities=13% Similarity=0.263 Sum_probs=33.5
Q ss_pred CCCeEEEEEEEeecCe--EEEeccceeeecccccHHHHHHHHHHHhc
Q 040186 137 ENPLVLVQITSFACGG--ISIGLGGSHALFDGVGAFKFLASWAHVSS 181 (467)
Q Consensus 137 ~~Pll~vQvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 181 (467)
..|++.+--..-.+|. +-|+++++|.++||.-++.|++.+.+.+.
T Consensus 163 ~~PIi~~G~~~~~~~~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 163 FAPIITMAKYQQEGDRLLLPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp CSCEEEEECCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred cccEEEeeEEEEECCeEEEEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 3587764222112343 68899999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=67.96 E-value=2.4 Score=37.89 Aligned_cols=44 Identities=18% Similarity=0.206 Sum_probs=31.8
Q ss_pred CCCeEEEEEEEeecCe--EEEeccceeeecccccHHHHHHHHHHHh
Q 040186 137 ENPLVLVQITSFACGG--ISIGLGGSHALFDGVGAFKFLASWAHVS 180 (467)
Q Consensus 137 ~~Pll~vQvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~ 180 (467)
..|++.+=-..-.+|. +-|++++||.++||.-++.|++.+.+.+
T Consensus 171 ~~PIi~~Gk~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 171 NYPLLNAGKAIIREGRLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp SSCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred eEEEEecceEEEECCcEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 3687753211112333 6889999999999999999999998754
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=67.45 E-value=2.5 Score=37.84 Aligned_cols=44 Identities=14% Similarity=0.184 Sum_probs=32.8
Q ss_pred CCeEEEEEEEeecCe--EEEeccceeeecccccHHHHHHHHHHHhc
Q 040186 138 NPLVLVQITSFACGG--ISIGLGGSHALFDGVGAFKFLASWAHVSS 181 (467)
Q Consensus 138 ~Pll~vQvt~f~~GG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 181 (467)
.|++.+--..-++|. +-|+++++|.+.||.-++.|++.+.+.+.
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 577754322122333 78899999999999999999999988764
No 16
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=66.53 E-value=3.2 Score=37.76 Aligned_cols=29 Identities=24% Similarity=0.409 Sum_probs=26.9
Q ss_pred EEEeccceeeecccccHHHHHHHHHHHhc
Q 040186 153 ISIGLGGSHALFDGVGAFKFLASWAHVSS 181 (467)
Q Consensus 153 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 181 (467)
+-|+++++|.++||.-++.|++.+.+.+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 78999999999999999999999998764
No 17
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=63.22 E-value=3.4 Score=37.67 Aligned_cols=29 Identities=14% Similarity=0.306 Sum_probs=26.7
Q ss_pred EEEeccceeeecccccHHHHHHHHHHHhc
Q 040186 153 ISIGLGGSHALFDGVGAFKFLASWAHVSS 181 (467)
Q Consensus 153 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 181 (467)
+-|+++++|.+.||.-+..|++.+.+.+.
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le 236 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLA 236 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHh
Confidence 67999999999999999999999998764
No 18
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=63.13 E-value=3.4 Score=37.37 Aligned_cols=30 Identities=23% Similarity=0.386 Sum_probs=27.1
Q ss_pred EEEeccceeeecccccHHHHHHHHHHHhcC
Q 040186 153 ISIGLGGSHALFDGVGAFKFLASWAHVSSG 182 (467)
Q Consensus 153 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 182 (467)
+-|+++++|.+.||.-++.|++.+.+.+..
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 669999999999999999999999987653
No 19
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=62.75 E-value=3 Score=37.52 Aligned_cols=30 Identities=27% Similarity=0.444 Sum_probs=27.3
Q ss_pred EEEeccceeeecccccHHHHHHHHHHHhcC
Q 040186 153 ISIGLGGSHALFDGVGAFKFLASWAHVSSG 182 (467)
Q Consensus 153 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 182 (467)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 558999999999999999999999998764
No 20
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=61.53 E-value=15 Score=28.81 Aligned_cols=38 Identities=21% Similarity=0.294 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHhhhccccCCeeeeeCCCCcEEEEeCC
Q 040186 58 ELERAKRALQRVLVSWYPAAGRFKFNETTGKLEIDCNN 95 (467)
Q Consensus 58 ~~~~L~~sL~~~L~~~p~LaGri~~~~~~G~~~i~~~~ 95 (467)
+++.|+++|...+.+-..+||.+...-+.+++.|..++
T Consensus 93 dlea~ekalkemirqarkfagtvtytl~gn~l~i~itg 130 (170)
T 4hhu_A 93 DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVITG 130 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEECSSEEEEEEES
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEeC
Confidence 58999999999999999999999876534568877654
No 21
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=61.45 E-value=3.8 Score=37.80 Aligned_cols=29 Identities=17% Similarity=0.463 Sum_probs=26.6
Q ss_pred EEEeccceeeecccccHHHHHHHHHHHhc
Q 040186 153 ISIGLGGSHALFDGVGAFKFLASWAHVSS 181 (467)
Q Consensus 153 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 181 (467)
+-|+++++|.++||.-+..|++.+.+.+.
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le 252 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLE 252 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHh
Confidence 67899999999999999999999998764
No 22
>4hhu_A OR280; engineered protein, PSI-biology, structural genomi unknown function; HET: AE4 PG4; 2.00A {Synthetic construct}
Probab=58.61 E-value=15 Score=28.81 Aligned_cols=38 Identities=21% Similarity=0.294 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHhhhccccCCeeeeeCCCCcEEEEeCC
Q 040186 58 ELERAKRALQRVLVSWYPAAGRFKFNETTGKLEIDCNN 95 (467)
Q Consensus 58 ~~~~L~~sL~~~L~~~p~LaGri~~~~~~G~~~i~~~~ 95 (467)
+++.|+++|...+.+-..+||.+...-+.+++.|..++
T Consensus 12 dlea~ekalkemirqarkfagtvtytl~gn~l~i~itg 49 (170)
T 4hhu_A 12 DLEALEKALKEMIRQARKFAGTVTYTLSGNRLVIVITG 49 (170)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEEEETTEEEEEEES
T ss_pred cHHHHHHHHHHHHHHHHhhcceEEEEEeCCEEEEEEeC
Confidence 58999999999999999999999876524567776654
No 23
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=56.26 E-value=5.3 Score=36.68 Aligned_cols=30 Identities=27% Similarity=0.327 Sum_probs=27.5
Q ss_pred EEEeccceeeecccccHHHHHHHHHHHhcC
Q 040186 153 ISIGLGGSHALFDGVGAFKFLASWAHVSSG 182 (467)
Q Consensus 153 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 182 (467)
+-|+++++|.+.||.-++.|++.+.+.+..
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999998764
No 24
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=54.97 E-value=5.7 Score=36.30 Aligned_cols=30 Identities=13% Similarity=0.262 Sum_probs=27.3
Q ss_pred EEEeccceeeecccccHHHHHHHHHHHhcC
Q 040186 153 ISIGLGGSHALFDGVGAFKFLASWAHVSSG 182 (467)
Q Consensus 153 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 182 (467)
+-|+++++|.+.||.-+..|++.+.+.+..
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999988764
No 25
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=53.76 E-value=15 Score=25.32 Aligned_cols=39 Identities=23% Similarity=0.282 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHHHhhhccccCCeeeeeCCCCcEEEEeCC
Q 040186 57 IELERAKRALQRVLVSWYPAAGRFKFNETTGKLEIDCNN 95 (467)
Q Consensus 57 ~~~~~L~~sL~~~L~~~p~LaGri~~~~~~G~~~i~~~~ 95 (467)
.+++.++++|...+.+-..+||.+...-..+.++|..++
T Consensus 10 ddleafekalkemirqarkfagtvtytldgndleiritg 48 (85)
T 2kl8_A 10 DDLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRITG 48 (85)
T ss_dssp SSHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEES
T ss_pred CcHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEec
Confidence 358899999999999999999999876523458887754
No 26
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=43.49 E-value=19 Score=19.29 Aligned_cols=19 Identities=26% Similarity=0.501 Sum_probs=15.8
Q ss_pred ccccHHHHHHHHHHHHHHH
Q 040186 286 TRCSTFDVLCAHVWKARVM 304 (467)
Q Consensus 286 ~~~S~~d~l~A~lW~~~~~ 304 (467)
+-+++.|-|+-++|+.+..
T Consensus 6 svftsqdylsdhlwralna 24 (26)
T 2xl1_A 6 SVFTSQDYLSDHLWRALNA 24 (26)
T ss_pred ceeecHHHHHHHHHHHHhc
Confidence 4578899999999998753
No 27
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=40.34 E-value=5.9 Score=39.32 Aligned_cols=30 Identities=27% Similarity=0.345 Sum_probs=0.0
Q ss_pred EEEeccceeeecccccHHHHHHHHHHHhcC
Q 040186 153 ISIGLGGSHALFDGVGAFKFLASWAHVSSG 182 (467)
Q Consensus 153 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 182 (467)
+-|+++++|.++||.-...|++.+.+.+..
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 459999999999999999999999887653
No 28
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=30.48 E-value=1.1e+02 Score=20.62 Aligned_cols=40 Identities=18% Similarity=0.121 Sum_probs=29.2
Q ss_pred CeEEEEEEeCHHHHHHHHHHhhhcCCCccccHHHHHHHHHHHHHHHHh
Q 040186 259 ELVLVTLSVKKVVVDAWKGMAIESGNLTRCSTFDVLCAHVWKARVMAL 306 (467)
Q Consensus 259 ~~~~~~~~~~~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~~~ar 306 (467)
..-...|+|+.++.+.|.+.+.++. |.+..+|=|.+.++-
T Consensus 14 ~~~~Vs~Y~SkEey~~L~klA~eE~--------eSV~sfIKR~IlK~l 53 (66)
T 2k1o_A 14 RNFSVTFYLSKEEHDVLRRLADEEV--------ESVNSFVKRHILKTI 53 (66)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHHTTC--------SCHHHHHHHHHHHHH
T ss_pred cceEEEEEecHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHH
Confidence 4567899999999999999998864 223445555566554
No 29
>1p94_A Plasmid partition protein PArg; ribbon-helix-helix, dimer, DNA binding, cell cycle; NMR {Salmonella enterica} SCOP: a.43.1.3
Probab=26.93 E-value=1.6e+02 Score=21.20 Aligned_cols=43 Identities=19% Similarity=0.165 Sum_probs=35.7
Q ss_pred CCCCeEEEEEEeCHHHHHHHHHHhhhcCCCccccHHHHHHHHHHHHH
Q 040186 256 PQGELVLVTLSVKKVVVDAWKGMAIESGNLTRCSTFDVLCAHVWKAR 302 (467)
Q Consensus 256 ~~~~~~~~~~~~~~~~l~~Lk~~~~~~~~~~~~S~~d~l~A~lW~~~ 302 (467)
+........|.|+.+.-++||..|...+ .|..|+|..++=..+
T Consensus 30 ~~~~~~Rlti~i~~~lh~rlK~~Aa~~g----~Smsdvvreli~~~L 72 (76)
T 1p94_A 30 SSGKIKRVNVNFDEEKHTRFKAACARKG----TSITDVVNQLVDNWL 72 (76)
T ss_dssp STTCEEECCEEEEHHHHHHHHHHHHHHT----CCHHHHHHHHHHHHH
T ss_pred CccCceeEEEEcCHHHHHHHHHHHHHcC----CCHHHHHHHHHHHHH
Confidence 3456778899999999999999999876 899999988875544
Done!