Query 040187
Match_columns 299
No_of_seqs 195 out of 2114
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 05:57:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040187.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040187hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1515 Arylacetamide deacetyl 100.0 1E-42 2.2E-47 295.4 27.8 262 29-296 34-335 (336)
2 PRK10162 acetyl esterase; Prov 100.0 3E-35 6.6E-40 253.7 25.1 232 56-298 55-317 (318)
3 COG0657 Aes Esterase/lipase [L 100.0 8.1E-33 1.8E-37 238.9 22.9 223 65-297 60-311 (312)
4 PF07859 Abhydrolase_3: alpha/ 100.0 4.9E-31 1.1E-35 215.3 11.6 178 87-274 1-210 (211)
5 COG1506 DAP2 Dipeptidyl aminop 99.9 3.3E-21 7.3E-26 180.0 19.2 221 57-299 364-619 (620)
6 KOG4388 Hormone-sensitive lipa 99.8 2.5E-20 5.5E-25 162.8 15.3 113 83-204 395-507 (880)
7 PF00326 Peptidase_S9: Prolyl 99.8 1.8E-19 3.8E-24 147.3 13.6 175 107-299 5-212 (213)
8 TIGR02821 fghA_ester_D S-formy 99.8 1.8E-17 3.9E-22 140.5 23.9 211 65-297 23-275 (275)
9 PF10340 DUF2424: Protein of u 99.8 4E-18 8.8E-23 145.8 17.5 128 68-208 105-238 (374)
10 PF01738 DLH: Dienelactone hyd 99.8 2E-18 4.4E-23 141.5 15.1 193 70-297 2-218 (218)
11 COG0412 Dienelactone hydrolase 99.8 4.2E-17 9.2E-22 134.2 21.0 204 59-298 3-235 (236)
12 COG2272 PnbA Carboxylesterase 99.8 4.3E-19 9.4E-24 154.4 8.0 130 65-206 76-218 (491)
13 PRK10115 protease 2; Provision 99.8 1.7E-17 3.8E-22 156.2 19.1 223 54-298 412-677 (686)
14 KOG1455 Lysophospholipase [Lip 99.8 5.9E-17 1.3E-21 132.8 17.7 210 65-296 36-312 (313)
15 PRK10566 esterase; Provisional 99.8 1.1E-16 2.3E-21 133.9 19.4 201 68-297 11-249 (249)
16 PLN02442 S-formylglutathione h 99.8 6.3E-17 1.4E-21 137.6 18.1 213 65-299 28-283 (283)
17 KOG4627 Kynurenine formamidase 99.8 2.5E-18 5.5E-23 132.2 8.3 134 54-208 41-175 (270)
18 PLN02298 hydrolase, alpha/beta 99.8 2.6E-16 5.6E-21 137.2 21.9 135 53-207 27-171 (330)
19 cd00312 Esterase_lipase Estera 99.7 7.1E-18 1.5E-22 154.8 10.2 129 65-206 75-214 (493)
20 PLN02385 hydrolase; alpha/beta 99.7 1.3E-15 2.8E-20 133.7 23.2 121 65-206 70-198 (349)
21 PF00135 COesterase: Carboxyle 99.7 1.2E-17 2.6E-22 154.9 10.6 129 65-204 105-244 (535)
22 PRK05077 frsA fermentation/res 99.7 9.1E-15 2E-19 130.4 24.2 211 57-297 167-413 (414)
23 PHA02857 monoglyceride lipase; 99.7 6.1E-15 1.3E-19 125.2 21.7 117 65-206 9-133 (276)
24 PLN00021 chlorophyllase 99.7 2.6E-15 5.5E-20 128.7 19.0 144 55-207 23-168 (313)
25 PRK13604 luxD acyl transferase 99.7 7.7E-15 1.7E-19 123.4 20.8 122 61-207 14-143 (307)
26 PLN02652 hydrolase; alpha/beta 99.7 1.4E-14 3.1E-19 128.2 22.3 122 65-208 119-248 (395)
27 TIGR03101 hydr2_PEP hydrolase, 99.7 7.1E-15 1.5E-19 122.7 19.2 202 68-292 11-264 (266)
28 KOG2100 Dipeptidyl aminopeptid 99.7 2.1E-15 4.6E-20 142.7 17.8 224 57-298 499-749 (755)
29 PRK10749 lysophospholipase L2; 99.7 1.4E-14 3E-19 126.2 21.1 116 65-206 39-167 (330)
30 PRK11460 putative hydrolase; P 99.6 1.3E-14 2.8E-19 119.8 17.2 174 82-297 14-209 (232)
31 PF02230 Abhydrolase_2: Phosph 99.6 6.9E-15 1.5E-19 120.3 14.2 115 158-297 99-216 (216)
32 TIGR03100 hydr1_PEP hydrolase, 99.6 5.2E-14 1.1E-18 119.3 18.9 126 60-207 4-136 (274)
33 COG2267 PldB Lysophospholipase 99.6 4.2E-14 9.1E-19 120.6 18.2 123 65-208 18-145 (298)
34 KOG2281 Dipeptidyl aminopeptid 99.6 2.7E-14 5.8E-19 126.9 15.9 215 64-295 621-866 (867)
35 KOG4391 Predicted alpha/beta h 99.6 9.8E-15 2.1E-19 113.6 10.9 217 53-297 49-283 (300)
36 PF12695 Abhydrolase_5: Alpha/ 99.6 6E-14 1.3E-18 107.1 14.0 145 86-272 1-145 (145)
37 PF05448 AXE1: Acetyl xylan es 99.6 1.8E-13 3.8E-18 117.6 17.0 210 53-296 51-320 (320)
38 KOG1552 Predicted alpha/beta h 99.6 4.4E-14 9.6E-19 113.7 12.2 207 55-296 34-252 (258)
39 TIGR01840 esterase_phb esteras 99.6 2.9E-14 6.2E-19 116.3 11.5 117 72-206 2-131 (212)
40 PF12740 Chlorophyllase2: Chlo 99.6 5.4E-14 1.2E-18 115.0 12.6 130 68-206 3-132 (259)
41 COG1647 Esterase/lipase [Gener 99.5 7.1E-13 1.5E-17 103.9 16.3 183 82-295 14-243 (243)
42 PLN02824 hydrolase, alpha/beta 99.5 3.5E-12 7.6E-17 109.3 21.9 99 84-205 29-137 (294)
43 COG0400 Predicted esterase [Ge 99.5 2.7E-13 5.8E-18 108.4 12.7 176 82-297 16-206 (207)
44 COG2945 Predicted hydrolase of 99.5 2.4E-12 5.2E-17 98.8 16.3 193 60-294 6-205 (210)
45 PRK10673 acyl-CoA esterase; Pr 99.5 4.5E-12 9.8E-17 106.1 19.8 105 70-203 4-114 (255)
46 PRK00870 haloalkane dehalogena 99.5 1.3E-11 2.8E-16 106.3 22.9 125 57-204 20-149 (302)
47 PF10503 Esterase_phd: Esteras 99.5 4.4E-13 9.5E-18 108.3 10.6 121 69-206 1-133 (220)
48 TIGR03611 RutD pyrimidine util 99.4 7.6E-12 1.6E-16 104.4 17.4 101 83-206 12-116 (257)
49 TIGR03695 menH_SHCHC 2-succiny 99.4 9.7E-12 2.1E-16 102.8 17.5 99 85-206 2-106 (251)
50 KOG4389 Acetylcholinesterase/B 99.4 2.6E-13 5.5E-18 117.5 7.5 105 66-178 118-232 (601)
51 PRK10985 putative hydrolase; P 99.4 6.5E-12 1.4E-16 109.1 16.4 131 58-207 33-170 (324)
52 TIGR03343 biphenyl_bphD 2-hydr 99.4 3.3E-11 7.2E-16 102.5 20.5 101 83-204 29-135 (282)
53 PLN02894 hydrolase, alpha/beta 99.4 7.8E-11 1.7E-15 105.1 23.1 99 83-205 104-211 (402)
54 TIGR02427 protocat_pcaD 3-oxoa 99.4 1.4E-11 3E-16 102.0 17.1 100 83-205 12-114 (251)
55 TIGR01250 pro_imino_pep_2 prol 99.4 5.1E-11 1.1E-15 100.9 20.1 102 83-205 24-131 (288)
56 PRK10439 enterobactin/ferric e 99.4 7.1E-12 1.5E-16 111.4 15.2 188 66-276 191-395 (411)
57 TIGR03056 bchO_mg_che_rel puta 99.4 2.5E-11 5.5E-16 102.7 18.1 100 83-205 27-130 (278)
58 KOG1516 Carboxylesterase and r 99.4 1.1E-12 2.5E-17 121.9 9.8 114 65-184 93-215 (545)
59 COG3509 LpqC Poly(3-hydroxybut 99.4 5.6E-12 1.2E-16 103.3 12.5 218 65-297 43-308 (312)
60 PF07224 Chlorophyllase: Chlor 99.4 2.5E-12 5.5E-17 103.3 10.2 130 67-208 31-160 (307)
61 PLN02511 hydrolase 99.4 2.6E-11 5.7E-16 107.7 17.0 132 57-206 72-211 (388)
62 PLN02965 Probable pheophorbida 99.4 6.7E-11 1.5E-15 99.3 18.6 97 86-204 5-106 (255)
63 TIGR01836 PHA_synth_III_C poly 99.4 1.5E-10 3.3E-15 101.7 21.5 132 55-208 35-174 (350)
64 COG3458 Acetyl esterase (deace 99.4 1.2E-11 2.6E-16 99.9 13.0 133 53-208 51-213 (321)
65 PF06500 DUF1100: Alpha/beta h 99.4 6.6E-11 1.4E-15 102.9 18.3 128 57-206 164-297 (411)
66 TIGR02240 PHA_depoly_arom poly 99.4 8.6E-11 1.9E-15 99.8 18.2 99 84-205 25-126 (276)
67 TIGR00976 /NonD putative hydro 99.4 8.6E-12 1.9E-16 115.8 12.6 123 65-206 5-133 (550)
68 COG4099 Predicted peptidase [G 99.4 3E-12 6.5E-17 104.4 8.2 172 65-267 170-354 (387)
69 PLN02679 hydrolase, alpha/beta 99.3 3.1E-10 6.6E-15 100.1 21.3 100 84-205 88-191 (360)
70 KOG2564 Predicted acetyltransf 99.3 2.1E-11 4.5E-16 98.9 11.3 122 58-202 50-179 (343)
71 PRK03204 haloalkane dehalogena 99.3 2.3E-10 5E-15 97.7 18.3 99 84-205 34-136 (286)
72 TIGR01607 PST-A Plasmodium sub 99.3 1.7E-10 3.7E-15 100.5 17.5 137 65-206 6-186 (332)
73 TIGR01738 bioH putative pimelo 99.3 1.7E-10 3.6E-15 95.3 16.7 96 84-204 4-99 (245)
74 PRK03592 haloalkane dehalogena 99.3 6E-10 1.3E-14 95.5 20.1 98 84-204 27-127 (295)
75 PRK11126 2-succinyl-6-hydroxy- 99.3 5E-10 1.1E-14 93.0 18.6 99 84-205 2-102 (242)
76 PRK14875 acetoin dehydrogenase 99.3 2.1E-10 4.6E-15 101.5 17.0 100 83-205 130-232 (371)
77 PRK11071 esterase YqiA; Provis 99.3 1.9E-10 4E-15 92.0 14.7 169 85-294 2-189 (190)
78 KOG3101 Esterase D [General fu 99.3 5.7E-11 1.2E-15 92.4 10.7 203 66-277 25-266 (283)
79 KOG4409 Predicted hydrolase/ac 99.3 3.2E-10 6.9E-15 95.3 15.3 130 58-206 67-196 (365)
80 PLN03087 BODYGUARD 1 domain co 99.2 2.6E-09 5.6E-14 96.5 21.8 116 67-205 186-309 (481)
81 PF12715 Abhydrolase_7: Abhydr 99.2 1.1E-10 2.5E-15 99.8 12.1 133 53-202 83-257 (390)
82 KOG3043 Predicted hydrolase re 99.2 2.9E-10 6.3E-15 89.5 13.1 177 85-298 40-242 (242)
83 PRK10349 carboxylesterase BioH 99.2 8.6E-10 1.9E-14 92.5 16.1 95 85-204 14-108 (256)
84 cd00707 Pancreat_lipase_like P 99.2 2.7E-10 5.8E-15 96.4 12.1 108 82-206 34-148 (275)
85 PF12697 Abhydrolase_6: Alpha/ 99.2 4.1E-10 8.9E-15 91.6 12.7 97 87-206 1-102 (228)
86 PF02129 Peptidase_S15: X-Pro 99.2 1.7E-10 3.6E-15 97.8 10.5 124 65-209 1-140 (272)
87 COG0429 Predicted hydrolase of 99.2 1.2E-09 2.5E-14 91.5 14.8 112 57-184 50-169 (345)
88 PLN02211 methyl indole-3-aceta 99.2 4.8E-10 1E-14 95.0 12.9 103 82-205 16-122 (273)
89 PLN03084 alpha/beta hydrolase 99.2 3.9E-09 8.4E-14 93.2 18.8 101 83-206 126-233 (383)
90 KOG1838 Alpha/beta hydrolase [ 99.2 8.2E-09 1.8E-13 89.5 20.1 133 55-204 92-235 (409)
91 PF03403 PAF-AH_p_II: Platelet 99.2 1.2E-10 2.6E-15 102.4 8.9 190 82-298 98-360 (379)
92 KOG4178 Soluble epoxide hydrol 99.2 2.5E-08 5.3E-13 83.7 21.9 125 53-205 19-148 (322)
93 PRK06489 hypothetical protein; 99.1 1.3E-09 2.8E-14 96.2 14.3 102 84-204 69-188 (360)
94 PLN02980 2-oxoglutarate decarb 99.1 7.3E-09 1.6E-13 106.7 21.4 99 83-204 1370-1479(1655)
95 COG1770 PtrB Protease II [Amin 99.1 2.1E-09 4.6E-14 97.1 15.3 200 53-272 414-656 (682)
96 KOG2382 Predicted alpha/beta h 99.1 3.8E-09 8.3E-14 88.5 14.9 100 69-185 38-145 (315)
97 PLN02578 hydrolase 99.1 1.6E-08 3.4E-13 89.1 19.1 97 84-204 86-186 (354)
98 PRK07581 hypothetical protein; 99.1 5.4E-09 1.2E-13 91.5 16.1 100 83-204 40-158 (339)
99 PLN02872 triacylglycerol lipas 99.1 2.9E-09 6.4E-14 94.2 13.9 131 57-206 45-198 (395)
100 TIGR03230 lipo_lipase lipoprot 99.1 3.2E-09 7E-14 94.2 13.8 106 83-205 40-154 (442)
101 KOG3847 Phospholipase A2 (plat 99.1 2E-09 4.2E-14 88.8 11.4 114 81-207 115-277 (399)
102 KOG2112 Lysophospholipase [Lip 99.0 9.2E-09 2E-13 80.6 13.4 130 138-295 72-203 (206)
103 COG2382 Fes Enterochelin ester 99.0 3.6E-09 7.8E-14 87.6 11.7 202 56-276 67-284 (299)
104 PF08840 BAAT_C: BAAT / Acyl-C 99.0 2.4E-09 5.3E-14 87.0 10.2 146 137-298 3-212 (213)
105 COG1505 Serine proteases of th 99.0 3.5E-09 7.6E-14 94.6 11.5 223 55-298 391-648 (648)
106 PRK05371 x-prolyl-dipeptidyl a 99.0 7.5E-08 1.6E-12 92.1 20.9 92 108-206 271-374 (767)
107 TIGR01249 pro_imino_pep_1 prol 99.0 7.4E-09 1.6E-13 89.3 12.6 99 84-205 27-130 (306)
108 KOG2237 Predicted serine prote 99.0 1.5E-08 3.3E-13 91.1 13.6 133 57-207 440-586 (712)
109 KOG1454 Predicted hydrolase/ac 98.9 7.1E-08 1.5E-12 83.4 17.0 103 82-205 56-166 (326)
110 PRK00175 metX homoserine O-ace 98.9 4.2E-08 9E-13 87.2 15.9 103 83-205 47-182 (379)
111 PF00756 Esterase: Putative es 98.9 4.2E-09 9E-14 88.1 7.7 125 66-208 5-153 (251)
112 PF05728 UPF0227: Uncharacteri 98.9 3.9E-08 8.5E-13 77.8 12.2 89 87-206 2-92 (187)
113 COG2936 Predicted acyl esteras 98.9 1.3E-08 2.7E-13 91.9 10.5 134 55-206 16-160 (563)
114 TIGR01392 homoserO_Ac_trn homo 98.9 1.3E-08 2.9E-13 89.5 10.5 117 67-205 16-162 (351)
115 COG4188 Predicted dienelactone 98.9 2.8E-08 6.1E-13 84.8 11.6 124 53-183 32-178 (365)
116 COG0627 Predicted esterase [Ge 98.9 1.8E-08 4E-13 86.0 9.8 213 71-298 37-313 (316)
117 TIGR01838 PHA_synth_I poly(R)- 98.8 1.2E-07 2.7E-12 86.6 13.9 134 58-209 164-306 (532)
118 COG3208 GrsT Predicted thioest 98.7 1.6E-06 3.4E-11 70.0 16.1 103 83-201 6-108 (244)
119 COG2819 Predicted hydrolase of 98.7 1.2E-06 2.7E-11 71.8 14.7 217 55-294 8-259 (264)
120 PRK07868 acyl-CoA synthetase; 98.7 2.2E-06 4.7E-11 85.3 19.5 127 59-206 40-178 (994)
121 PRK08775 homoserine O-acetyltr 98.7 1.9E-07 4.1E-12 81.9 10.7 74 116-205 98-173 (343)
122 TIGR03502 lipase_Pla1_cef extr 98.6 5.4E-07 1.2E-11 85.2 13.2 98 83-186 448-577 (792)
123 PF00975 Thioesterase: Thioest 98.6 3.2E-07 7E-12 75.5 9.8 102 85-205 1-104 (229)
124 PF00151 Lipase: Lipase; Inte 98.6 1.4E-07 3.1E-12 81.5 7.4 110 82-206 69-188 (331)
125 PF08538 DUF1749: Protein of u 98.6 1.5E-06 3.2E-11 73.1 13.0 116 83-208 32-151 (303)
126 KOG4667 Predicted esterase [Li 98.6 1.8E-06 3.8E-11 68.0 12.3 105 82-208 31-142 (269)
127 PRK05855 short chain dehydroge 98.5 8.8E-07 1.9E-11 83.2 12.1 86 83-184 24-114 (582)
128 PF06342 DUF1057: Alpha/beta h 98.5 1.2E-05 2.5E-10 66.5 15.4 116 66-204 16-136 (297)
129 PRK04940 hypothetical protein; 98.5 2.8E-06 6E-11 66.1 10.8 112 164-295 60-179 (180)
130 PF05677 DUF818: Chlamydia CHL 98.5 4.1E-06 8.9E-11 70.8 12.5 117 57-184 111-235 (365)
131 KOG2984 Predicted hydrolase [G 98.4 1.1E-06 2.3E-11 68.6 7.8 99 85-204 43-148 (277)
132 PRK06765 homoserine O-acetyltr 98.4 2.6E-05 5.7E-10 69.2 16.1 73 116-204 98-195 (389)
133 COG3571 Predicted hydrolase of 98.4 9.4E-06 2E-10 61.0 10.9 102 83-205 13-125 (213)
134 PF00561 Abhydrolase_1: alpha/ 98.3 2.1E-06 4.5E-11 70.2 8.3 71 118-204 1-78 (230)
135 PF07819 PGAP1: PGAP1-like pro 98.3 8.5E-06 1.8E-10 66.8 11.4 110 84-206 4-124 (225)
136 PF03583 LIP: Secretory lipase 98.3 2.6E-05 5.6E-10 66.6 14.2 92 106-205 16-113 (290)
137 PF06057 VirJ: Bacterial virul 98.3 2.3E-06 5E-11 66.8 6.9 102 85-205 3-107 (192)
138 TIGR01839 PHA_synth_II poly(R) 98.3 1.3E-05 2.8E-10 73.0 12.3 136 56-209 189-332 (560)
139 PF09752 DUF2048: Uncharacteri 98.3 1.5E-05 3.1E-10 68.2 11.6 100 69-184 77-195 (348)
140 PF12146 Hydrolase_4: Putative 98.3 4.8E-06 1E-10 56.2 7.0 57 67-132 2-58 (79)
141 PF06821 Ser_hydrolase: Serine 98.2 2.2E-05 4.7E-10 61.4 9.9 92 87-206 1-92 (171)
142 PF10230 DUF2305: Uncharacteri 98.1 0.00011 2.4E-09 61.9 13.0 118 84-214 2-131 (266)
143 COG0596 MhpC Predicted hydrola 98.0 7.3E-05 1.6E-09 61.5 10.8 99 84-204 21-122 (282)
144 KOG2551 Phospholipase/carboxyh 97.9 0.00044 9.6E-09 55.1 13.3 109 167-297 107-221 (230)
145 PF05990 DUF900: Alpha/beta hy 97.8 0.0002 4.3E-09 59.1 10.0 111 82-207 16-139 (233)
146 COG3319 Thioesterase domains o 97.8 0.00025 5.4E-09 58.9 10.5 102 85-206 1-104 (257)
147 PF12048 DUF3530: Protein of u 97.8 0.0086 1.9E-07 51.6 20.2 128 61-208 65-232 (310)
148 PF11144 DUF2920: Protein of u 97.8 0.00048 1E-08 60.2 12.4 122 66-204 19-218 (403)
149 TIGR01849 PHB_depoly_PhaZ poly 97.8 0.0093 2E-07 53.0 20.3 126 66-209 83-212 (406)
150 PF02273 Acyl_transf_2: Acyl t 97.7 0.00097 2.1E-08 54.0 12.1 124 59-207 5-136 (294)
151 PF07082 DUF1350: Protein of u 97.7 0.00059 1.3E-08 55.7 10.4 92 86-185 18-111 (250)
152 PF05577 Peptidase_S28: Serine 97.7 0.00048 1E-08 62.5 11.0 125 68-208 13-151 (434)
153 PF01674 Lipase_2: Lipase (cla 97.7 0.00012 2.6E-09 59.4 6.3 82 87-184 4-95 (219)
154 PF03959 FSH1: Serine hydrolas 97.7 4.3E-05 9.4E-10 62.2 3.8 118 137-275 83-204 (212)
155 PF06028 DUF915: Alpha/beta hy 97.7 0.0021 4.6E-08 53.5 13.8 141 138-294 87-253 (255)
156 COG4757 Predicted alpha/beta h 97.6 0.00021 4.5E-09 57.3 6.9 70 104-184 45-125 (281)
157 KOG2624 Triglyceride lipase-ch 97.6 0.00034 7.4E-09 61.8 9.0 133 54-206 44-200 (403)
158 PTZ00472 serine carboxypeptida 97.6 0.0018 3.8E-08 59.0 13.8 67 136-209 150-220 (462)
159 PLN02733 phosphatidylcholine-s 97.6 0.00028 6.1E-09 63.4 8.0 92 104-209 109-205 (440)
160 PF11288 DUF3089: Protein of u 97.6 0.00029 6.4E-09 56.2 7.1 81 116-205 44-137 (207)
161 KOG1553 Predicted alpha/beta h 97.6 0.0013 2.9E-08 55.8 11.3 98 82-204 241-344 (517)
162 COG3150 Predicted esterase [Ge 97.5 0.0047 1E-07 47.1 12.6 21 165-185 60-80 (191)
163 COG4782 Uncharacterized protei 97.4 0.0011 2.3E-08 56.9 9.1 112 82-208 114-237 (377)
164 COG4814 Uncharacterized protei 97.4 0.012 2.7E-07 48.0 14.4 106 83-206 45-177 (288)
165 PF10142 PhoPQ_related: PhoPQ- 97.4 0.037 8.1E-07 48.5 18.2 121 68-200 49-201 (367)
166 PF05057 DUF676: Putative seri 97.3 0.0027 6E-08 51.8 9.8 42 141-187 60-101 (217)
167 KOG3253 Predicted alpha/beta h 97.3 0.005 1.1E-07 56.1 12.0 168 83-276 175-349 (784)
168 COG4947 Uncharacterized protei 97.3 0.00055 1.2E-08 52.2 4.8 121 138-275 85-218 (227)
169 KOG3967 Uncharacterized conser 97.2 0.0067 1.5E-07 48.1 10.6 108 82-204 99-226 (297)
170 KOG3975 Uncharacterized conser 97.1 0.11 2.5E-06 42.4 18.5 91 82-186 27-132 (301)
171 COG2021 MET2 Homoserine acetyl 97.1 0.0059 1.3E-07 52.7 9.9 102 82-202 49-179 (368)
172 TIGR03712 acc_sec_asp2 accesso 97.0 0.021 4.5E-07 51.1 12.5 103 83-207 288-392 (511)
173 PF00450 Peptidase_S10: Serine 96.9 0.013 2.9E-07 52.7 11.7 46 162-207 134-183 (415)
174 PRK10252 entF enterobactin syn 96.9 0.0074 1.6E-07 62.4 11.2 102 84-204 1068-1170(1296)
175 PF11187 DUF2974: Protein of u 96.7 0.0032 6.9E-08 51.5 5.4 53 141-203 69-121 (224)
176 KOG3724 Negative regulator of 96.7 0.0069 1.5E-07 56.9 8.0 67 118-185 133-203 (973)
177 cd00741 Lipase Lipase. Lipase 96.6 0.009 1.9E-07 45.8 7.2 42 162-205 26-67 (153)
178 PF02450 LCAT: Lecithin:choles 96.6 0.0065 1.4E-07 54.2 7.1 92 105-209 67-164 (389)
179 PF01764 Lipase_3: Lipase (cla 96.6 0.011 2.5E-07 44.3 7.5 43 163-205 63-106 (140)
180 COG3243 PhaC Poly(3-hydroxyalk 96.5 0.012 2.7E-07 51.6 7.7 115 73-206 97-218 (445)
181 KOG2931 Differentiation-relate 96.4 0.16 3.5E-06 42.6 13.3 119 66-206 31-158 (326)
182 PF05705 DUF829: Eukaryotic pr 96.3 0.5 1.1E-05 39.1 16.9 42 249-293 199-240 (240)
183 KOG2183 Prolylcarboxypeptidase 96.2 0.038 8.2E-07 48.4 9.1 72 107-186 101-189 (492)
184 KOG4840 Predicted hydrolases o 96.2 0.023 5.1E-07 45.5 6.9 88 106-207 55-146 (299)
185 COG3946 VirJ Type IV secretory 96.1 0.029 6.2E-07 49.0 7.8 85 84-185 260-347 (456)
186 COG1075 LipA Predicted acetylt 96.1 0.024 5.3E-07 49.5 7.5 101 86-205 61-164 (336)
187 COG3545 Predicted esterase of 96.0 0.071 1.5E-06 41.2 8.7 53 136-205 42-94 (181)
188 PF01083 Cutinase: Cutinase; 96.0 0.036 7.8E-07 43.7 7.4 84 108-203 27-120 (179)
189 COG3673 Uncharacterized conser 96.0 0.13 2.8E-06 43.7 10.7 41 137-186 104-144 (423)
190 PLN03016 sinapoylglucose-malat 95.9 0.4 8.7E-06 43.4 14.6 47 162-208 163-213 (433)
191 cd00519 Lipase_3 Lipase (class 95.9 0.032 7E-07 45.9 7.0 43 162-205 126-168 (229)
192 PLN02209 serine carboxypeptida 95.9 0.31 6.8E-06 44.2 13.6 47 162-208 165-215 (437)
193 smart00824 PKS_TE Thioesterase 95.8 0.094 2E-06 41.8 9.5 84 105-203 15-100 (212)
194 PF11339 DUF3141: Protein of u 95.8 0.18 3.8E-06 45.8 11.3 103 71-186 54-162 (581)
195 COG2939 Carboxypeptidase C (ca 95.4 0.083 1.8E-06 47.6 8.2 65 135-207 174-238 (498)
196 KOG1282 Serine carboxypeptidas 95.4 0.23 4.9E-06 44.9 10.9 88 137-232 148-241 (454)
197 PLN02454 triacylglycerol lipas 95.4 0.061 1.3E-06 47.7 7.1 61 138-206 210-272 (414)
198 PLN02408 phospholipase A1 95.0 0.085 1.8E-06 46.1 6.7 26 163-188 199-224 (365)
199 KOG2541 Palmitoyl protein thio 94.9 0.44 9.5E-06 39.6 10.2 103 83-203 23-126 (296)
200 PF03096 Ndr: Ndr family; Int 94.7 0.35 7.6E-06 40.8 9.4 119 66-206 8-135 (283)
201 PLN02517 phosphatidylcholine-s 94.5 0.091 2E-06 48.6 5.9 92 105-207 158-265 (642)
202 PLN02802 triacylglycerol lipas 94.4 0.13 2.8E-06 46.7 6.6 25 164-188 330-354 (509)
203 PF08237 PE-PPE: PE-PPE domain 94.0 0.53 1.1E-05 38.6 9.0 63 117-187 2-71 (225)
204 PLN02571 triacylglycerol lipas 93.9 0.2 4.4E-06 44.5 6.8 41 138-186 208-248 (413)
205 PLN02606 palmitoyl-protein thi 93.9 1 2.2E-05 38.4 10.5 35 165-203 96-130 (306)
206 COG1073 Hydrolases of the alph 93.8 0.12 2.6E-06 43.6 5.3 37 260-297 262-298 (299)
207 PLN02633 palmitoyl protein thi 93.8 1.1 2.3E-05 38.4 10.5 104 83-203 25-129 (314)
208 KOG2182 Hydrolytic enzymes of 93.8 0.97 2.1E-05 40.9 10.6 118 72-205 74-207 (514)
209 PF07519 Tannase: Tannase and 93.7 1.1 2.3E-05 41.3 11.3 119 67-205 15-150 (474)
210 PLN03037 lipase class 3 family 93.1 0.34 7.5E-06 44.2 7.0 24 163-186 317-340 (525)
211 PF02089 Palm_thioest: Palmito 93.0 0.53 1.1E-05 39.7 7.5 35 164-203 80-114 (279)
212 PLN00413 triacylglycerol lipas 92.8 0.22 4.8E-06 44.9 5.3 23 163-185 283-305 (479)
213 PLN02324 triacylglycerol lipas 92.5 0.47 1E-05 42.2 6.8 40 138-185 197-236 (415)
214 PLN02847 triacylglycerol lipas 92.1 0.57 1.2E-05 43.5 7.0 24 164-187 251-274 (633)
215 PLN02310 triacylglycerol lipas 92.1 0.53 1.1E-05 41.8 6.7 23 164-186 209-231 (405)
216 PLN02934 triacylglycerol lipas 92.0 0.31 6.6E-06 44.4 5.2 38 138-185 305-342 (515)
217 PLN02753 triacylglycerol lipas 91.7 0.7 1.5E-05 42.3 7.1 24 163-186 311-334 (531)
218 PLN02162 triacylglycerol lipas 91.7 0.37 7.9E-06 43.4 5.3 23 163-185 277-299 (475)
219 PLN02719 triacylglycerol lipas 91.6 0.71 1.5E-05 42.1 7.0 25 163-187 297-321 (518)
220 PF03283 PAE: Pectinacetyleste 91.2 0.5 1.1E-05 41.7 5.6 43 137-187 137-179 (361)
221 PLN02761 lipase class 3 family 91.2 0.72 1.6E-05 42.2 6.6 24 163-186 293-316 (527)
222 PF09994 DUF2235: Uncharacteri 90.6 0.55 1.2E-05 39.9 5.2 43 136-187 73-115 (277)
223 KOG2369 Lecithin:cholesterol a 90.6 0.66 1.4E-05 41.7 5.8 72 105-187 126-205 (473)
224 KOG4569 Predicted lipase [Lipi 90.6 0.91 2E-05 39.7 6.7 41 139-189 156-196 (336)
225 PF04301 DUF452: Protein of un 87.8 4.3 9.2E-05 32.9 8.1 35 163-205 56-90 (213)
226 PLN02213 sinapoylglucose-malat 86.4 4.2 9.2E-05 35.3 8.0 65 138-209 32-100 (319)
227 COG5153 CVT17 Putative lipase 85.5 2 4.3E-05 36.2 5.1 23 163-185 275-297 (425)
228 KOG4540 Putative lipase essent 85.5 2 4.3E-05 36.2 5.1 23 163-185 275-297 (425)
229 PF06259 Abhydrolase_8: Alpha/ 84.0 19 0.00041 28.3 10.5 39 162-206 107-146 (177)
230 PF04083 Abhydro_lipase: Parti 82.9 5 0.00011 25.5 5.1 37 56-92 10-51 (63)
231 PF10081 Abhydrolase_9: Alpha/ 81.4 9 0.00019 32.4 7.4 101 91-204 41-146 (289)
232 KOG1551 Uncharacterized conser 75.3 4.9 0.00011 33.6 4.1 22 163-184 194-215 (371)
233 PF10686 DUF2493: Protein of u 72.0 9.6 0.00021 24.9 4.2 33 83-122 30-62 (71)
234 PF05277 DUF726: Protein of un 70.9 12 0.00027 32.7 5.9 44 162-206 218-261 (345)
235 KOG4127 Renal dipeptidase [Pos 69.7 21 0.00045 31.3 6.7 76 85-171 267-342 (419)
236 KOG1202 Animal-type fatty acid 67.1 44 0.00095 34.5 9.0 96 82-203 2121-2217(2376)
237 PF12242 Eno-Rase_NADH_b: NAD( 66.7 22 0.00047 23.6 4.9 41 138-185 21-61 (78)
238 COG0431 Predicted flavoprotein 63.0 17 0.00037 28.7 4.8 66 105-186 58-123 (184)
239 TIGR02690 resist_ArsH arsenica 60.6 22 0.00049 29.0 5.2 58 106-174 82-139 (219)
240 COG4425 Predicted membrane pro 60.5 27 0.00058 31.7 5.8 80 86-180 324-413 (588)
241 KOG2565 Predicted hydrolases o 60.4 29 0.00064 30.7 6.0 60 117-186 188-251 (469)
242 cd07224 Pat_like Patatin-like 59.9 14 0.0003 30.5 3.9 34 142-184 16-49 (233)
243 KOG2029 Uncharacterized conser 58.3 33 0.00071 32.3 6.2 26 161-186 523-548 (697)
244 COG3340 PepE Peptidase E [Amin 52.5 16 0.00034 29.6 2.9 42 83-127 31-72 (224)
245 COG0541 Ffh Signal recognition 52.5 1.2E+02 0.0026 27.6 8.6 110 83-200 98-246 (451)
246 cd07205 Pat_PNPLA6_PNPLA7_NTE1 50.7 24 0.00053 27.3 3.9 18 167-184 31-48 (175)
247 cd07210 Pat_hypo_W_succinogene 48.0 28 0.00061 28.4 3.9 18 167-184 31-48 (221)
248 COG0529 CysC Adenylylsulfate k 47.0 42 0.0009 26.5 4.4 39 82-124 20-58 (197)
249 cd07230 Pat_TGL4-5_like Triacy 45.5 31 0.00067 31.3 4.1 32 142-184 90-121 (421)
250 cd07198 Patatin Patatin-like p 45.2 32 0.0007 26.6 3.8 33 141-184 14-46 (172)
251 cd07207 Pat_ExoU_VipD_like Exo 45.1 37 0.00079 26.7 4.1 32 142-184 16-47 (194)
252 PRK06489 hypothetical protein; 44.4 50 0.0011 29.0 5.3 42 252-298 314-359 (360)
253 PF12122 DUF3582: Protein of u 43.9 96 0.0021 21.8 5.5 47 248-295 14-60 (101)
254 KOG2872 Uroporphyrinogen decar 43.4 31 0.00067 29.3 3.4 35 82-129 250-284 (359)
255 KOG1252 Cystathionine beta-syn 42.1 30 0.00065 30.1 3.2 20 164-183 303-322 (362)
256 PF05576 Peptidase_S37: PS-10 39.1 1.7E+02 0.0036 26.6 7.3 99 82-205 61-169 (448)
257 TIGR01392 homoserO_Ac_trn homo 36.9 53 0.0011 28.7 4.2 42 249-294 309-351 (351)
258 KOG4530 Predicted flavoprotein 36.4 1.2E+02 0.0026 23.3 5.3 61 106-181 78-138 (199)
259 cd07212 Pat_PNPLA9 Patatin-lik 35.0 31 0.00068 29.8 2.4 17 167-183 35-51 (312)
260 TIGR01249 pro_imino_pep_1 prol 34.6 70 0.0015 27.3 4.5 50 238-296 256-305 (306)
261 PRK13703 conjugal pilus assemb 34.5 1.1E+02 0.0024 25.5 5.4 55 85-143 145-199 (248)
262 cd07228 Pat_NTE_like_bacteria 33.9 37 0.0008 26.4 2.5 19 166-184 30-48 (175)
263 cd07218 Pat_iPLA2 Calcium-inde 33.5 62 0.0013 26.9 3.8 17 168-184 34-50 (245)
264 cd07204 Pat_PNPLA_like Patatin 33.4 61 0.0013 26.9 3.8 19 166-184 33-51 (243)
265 PRK10279 hypothetical protein; 32.6 61 0.0013 27.9 3.8 31 142-183 22-52 (300)
266 TIGR00632 vsr DNA mismatch end 32.1 96 0.0021 22.5 4.1 14 83-96 55-68 (117)
267 smart00827 PKS_AT Acyl transfe 31.8 74 0.0016 27.0 4.2 19 166-184 84-102 (298)
268 cd07206 Pat_TGL3-4-5_SDP1 Tria 30.8 79 0.0017 27.2 4.1 18 167-184 100-117 (298)
269 cd07229 Pat_TGL3_like Triacylg 30.8 72 0.0016 28.6 4.0 33 141-184 99-131 (391)
270 PF01734 Patatin: Patatin-like 30.6 43 0.00093 25.8 2.4 19 166-184 29-47 (204)
271 cd07222 Pat_PNPLA4 Patatin-lik 30.6 66 0.0014 26.7 3.6 33 142-183 16-50 (246)
272 COG4075 Uncharacterized conser 30.1 1.2E+02 0.0026 21.1 4.0 62 107-181 18-82 (110)
273 cd07211 Pat_PNPLA8 Patatin-lik 30.0 41 0.00089 28.9 2.3 17 167-183 44-60 (308)
274 cd00382 beta_CA Carbonic anhyd 29.9 1.4E+02 0.003 21.6 4.7 32 137-178 42-73 (119)
275 cd01819 Patatin_and_cPLA2 Pata 29.8 86 0.0019 23.8 3.9 19 164-182 28-46 (155)
276 KOG4372 Predicted alpha/beta h 29.5 59 0.0013 29.1 3.1 22 163-184 149-170 (405)
277 COG1830 FbaB DhnA-type fructos 29.1 3E+02 0.0065 23.2 7.0 70 83-175 143-214 (265)
278 cd07213 Pat17_PNPLA8_PNPLA9_li 29.0 46 0.00099 28.4 2.4 18 167-184 37-54 (288)
279 PRK05282 (alpha)-aspartyl dipe 28.0 1.8E+02 0.0039 24.0 5.6 18 166-183 114-131 (233)
280 cd07225 Pat_PNPLA6_PNPLA7 Pata 27.7 83 0.0018 27.2 3.8 33 141-184 31-63 (306)
281 TIGR02739 TraF type-F conjugat 27.7 1.7E+02 0.0037 24.6 5.5 55 85-143 152-206 (256)
282 cd07231 Pat_SDP1-like Sugar-De 27.6 98 0.0021 26.9 4.1 18 167-184 99-116 (323)
283 cd07217 Pat17_PNPLA8_PNPLA9_li 27.5 49 0.0011 29.1 2.4 17 167-183 44-60 (344)
284 COG0331 FabD (acyl-carrier-pro 27.1 94 0.002 26.9 4.0 43 132-183 62-104 (310)
285 cd07209 Pat_hypo_Ecoli_Z1214_l 27.0 52 0.0011 26.6 2.3 19 167-185 29-47 (215)
286 cd07216 Pat17_PNPLA8_PNPLA9_li 26.4 43 0.00094 28.8 1.8 17 167-183 45-61 (309)
287 cd07208 Pat_hypo_Ecoli_yjju_li 26.1 58 0.0013 27.3 2.5 34 142-185 15-48 (266)
288 cd07214 Pat17_isozyme_like Pat 26.0 49 0.0011 29.1 2.1 17 167-183 46-62 (349)
289 PF13207 AAA_17: AAA domain; P 25.8 90 0.002 22.0 3.2 32 87-125 1-32 (121)
290 PF14253 AbiH: Bacteriophage a 25.7 39 0.00084 28.3 1.4 15 162-176 233-247 (270)
291 cd03015 PRX_Typ2cys Peroxiredo 25.5 97 0.0021 23.9 3.5 41 83-124 29-70 (173)
292 cd07199 Pat17_PNPLA8_PNPLA9_li 25.4 55 0.0012 27.3 2.2 18 167-184 37-54 (258)
293 PRK08775 homoserine O-acetyltr 25.3 77 0.0017 27.6 3.2 41 252-296 297-339 (343)
294 PF05116 S6PP: Sucrose-6F-phos 25.2 61 0.0013 26.9 2.4 26 140-173 166-191 (247)
295 COG5247 BUR6 Class 2 transcrip 25.2 34 0.00074 23.8 0.7 26 1-26 8-33 (113)
296 TIGR02806 clostrip clostripain 25.0 47 0.001 30.3 1.7 15 82-96 113-127 (476)
297 PF13728 TraF: F plasmid trans 24.3 2.2E+02 0.0048 23.1 5.5 53 83-140 121-173 (215)
298 cd01520 RHOD_YbbB Member of th 23.5 1.7E+02 0.0038 21.1 4.4 33 82-123 85-117 (128)
299 PLN02840 tRNA dimethylallyltra 23.5 5.5E+02 0.012 23.4 8.2 36 83-125 19-54 (421)
300 cd07227 Pat_Fungal_NTE1 Fungal 23.5 69 0.0015 27.1 2.4 18 167-184 41-58 (269)
301 cd07232 Pat_PLPL Patain-like p 23.5 66 0.0014 29.1 2.5 18 167-184 98-115 (407)
302 PF03575 Peptidase_S51: Peptid 23.5 73 0.0016 24.1 2.4 12 166-177 70-81 (154)
303 cd03013 PRX5_like Peroxiredoxi 23.0 1.8E+02 0.0039 22.0 4.5 39 84-123 30-71 (155)
304 PF08386 Abhydrolase_4: TAP-li 22.5 2.8E+02 0.006 19.3 5.2 54 235-294 39-92 (103)
305 PF00698 Acyl_transf_1: Acyl t 22.4 90 0.0019 26.9 3.0 20 164-183 84-103 (318)
306 COG4822 CbiK Cobalamin biosynt 22.2 4.4E+02 0.0096 21.6 7.3 56 82-151 136-192 (265)
307 cd07220 Pat_PNPLA2 Patatin-lik 22.1 1.2E+02 0.0026 25.3 3.6 19 166-184 38-56 (249)
308 cd07215 Pat17_PNPLA8_PNPLA9_li 22.0 66 0.0014 28.0 2.2 16 167-182 43-58 (329)
309 cd01826 acyloxyacyl_hydrolase_ 22.0 44 0.00096 28.7 1.0 20 159-178 7-26 (305)
310 COG0505 CarA Carbamoylphosphat 21.9 4.1E+02 0.0088 23.6 6.7 61 106-181 191-266 (368)
311 PF14041 Lipoprotein_21: LppP/ 21.4 2E+02 0.0044 19.5 4.1 18 83-101 24-41 (89)
312 cd03016 PRX_1cys Peroxiredoxin 21.3 1.2E+02 0.0027 24.2 3.5 41 84-125 26-67 (203)
313 KOG1283 Serine carboxypeptidas 21.3 5.7E+02 0.012 22.5 10.3 46 161-206 119-167 (414)
314 PLN02752 [acyl-carrier protein 21.2 1.4E+02 0.003 26.1 4.0 18 167-184 127-144 (343)
315 PF04263 TPK_catalytic: Thiami 21.0 3.4E+02 0.0073 19.8 5.7 55 98-174 42-96 (123)
316 TIGR00128 fabD malonyl CoA-acy 20.9 1.4E+02 0.0031 25.0 4.0 20 165-184 84-103 (290)
317 TIGR02740 TraF-like TraF-like 20.9 2.3E+02 0.0049 24.0 5.1 50 83-136 166-215 (271)
318 cd00423 Pterin_binding Pterin 20.6 2.2E+02 0.0049 23.7 5.0 54 110-168 113-171 (258)
319 cd01523 RHOD_Lact_B Member of 20.6 2.4E+02 0.0052 19.1 4.5 29 82-120 60-88 (100)
320 PRK10964 ADP-heptose:LPS hepto 20.4 5.5E+02 0.012 22.0 9.2 37 83-122 177-215 (322)
321 COG1752 RssA Predicted esteras 20.4 1.6E+02 0.0035 25.2 4.2 21 165-185 40-60 (306)
322 TIGR03131 malonate_mdcH malona 20.4 1.5E+02 0.0033 25.1 4.1 20 164-183 76-95 (295)
323 KOG2385 Uncharacterized conser 20.2 3.1E+02 0.0067 25.7 5.9 68 131-204 419-486 (633)
324 cd01518 RHOD_YceA Member of th 20.2 1.8E+02 0.0038 19.8 3.7 31 82-122 60-91 (101)
325 PF01583 APS_kinase: Adenylyls 20.1 1.6E+02 0.0034 22.7 3.6 37 84-124 1-37 (156)
No 1
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=100.00 E-value=1e-42 Score=295.44 Aligned_cols=262 Identities=43% Similarity=0.689 Sum_probs=225.4
Q ss_pred hccCCCceeeccccccCCCCCCCC--CCCceEEEEEEcCCCCEEEEEEecCCCCC-CCccEEEEEcCCccccccCCCchh
Q 040187 29 CFRRNMTVNRFLFNLYDRKSSPST--KNGVTSFDVSVDATRDLWFRLYSPTNTTA-TNLPVIVYFHGGGFAILAANSKVY 105 (299)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~i~~P~~~~~-~~~p~vv~~HGGg~~~g~~~~~~~ 105 (299)
....++++.|.+.. ....|+.+ ..++..+++.+....++++|+|.|..... .+.|+|||||||||+.|+.....|
T Consensus 34 ~i~~~~~~~r~~~~--~~~~p~~~~p~~~v~~~dv~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y 111 (336)
T KOG1515|consen 34 RIFKDGSFERFFGR--FDKVPPSSDPVNGVTSKDVTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAY 111 (336)
T ss_pred eeecCCceeeeecc--cccCCCCCCcccCceeeeeEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchh
Confidence 34567778777654 34455554 34688899999999999999999998755 789999999999999999999999
Q ss_pred HHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHh
Q 040187 106 DDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLA 185 (299)
Q Consensus 106 ~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~ 185 (299)
+.++.++|.+.+++|+++|||++||+++|++++|+.+|+.|+.++. ++++++|++||+|+|+|+||++|..+|.++
T Consensus 112 ~~~~~~~a~~~~~vvvSVdYRLAPEh~~Pa~y~D~~~Al~w~~~~~----~~~~~~D~~rv~l~GDSaGGNia~~va~r~ 187 (336)
T KOG1515|consen 112 DSFCTRLAAELNCVVVSVDYRLAPEHPFPAAYDDGWAALKWVLKNS----WLKLGADPSRVFLAGDSAGGNIAHVVAQRA 187 (336)
T ss_pred HHHHHHHHHHcCeEEEecCcccCCCCCCCccchHHHHHHHHHHHhH----HHHhCCCcccEEEEccCccHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999973 248889999999999999999999999998
Q ss_pred ccCCCCCCccceEEEecccCCCCCCChHHHh--hcCCCCcchhhHHHHHHHcCCCCC-CCCcHHHH--------------
Q 040187 186 DGCNFSRLRLNGLIAIQPFFGGEERTESEMR--FQRDPLVGLKLTDWMWKAFLPEGS-NRDHPAAN-------------- 248 (299)
Q Consensus 186 ~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------------- 248 (299)
.++...+..++|+|+++|++.+.....+... ....+.......+++|..+++... +.++|.++
T Consensus 188 ~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~ 267 (336)
T KOG1515|consen 188 ADEKLSKPKIKGQILIYPFFQGTDRTESEKQQNLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLG 267 (336)
T ss_pred hhccCCCcceEEEEEEecccCCCCCCCHHHHHhhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccC
Confidence 7653346799999999999998877766544 445677788888999998888877 56655544
Q ss_pred -------------------HHHHHHHHCCCcEEEEEeCCCceEEEecCCc-hHHHHHHHHHHHHHHhh
Q 040187 249 -------------------RYYEGLKKCGKDAYLIEYPNAVHCFYLFPEV-LECSLFLKEVKDFICSQ 296 (299)
Q Consensus 249 -------------------~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~-~~~~~~~~~i~~fl~~~ 296 (299)
.|+++|++.|+++++.+++++.|+|..+... +.+.+.++.+.+||++.
T Consensus 268 lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 268 LPPTLVVVAGYDVLRDEGLAYAEKLKKAGVEVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CCceEEEEeCchhhhhhhHHHHHHHHHcCCeEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999875 78999999999999864
No 2
>PRK10162 acetyl esterase; Provisional
Probab=100.00 E-value=3e-35 Score=253.74 Aligned_cols=232 Identities=21% Similarity=0.294 Sum_probs=182.7
Q ss_pred ceEEEEEEc-CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC
Q 040187 56 VTSFDVSVD-ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP 134 (299)
Q Consensus 56 ~~~~~~~~~-~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~ 134 (299)
+..++++++ ..+.+.+++|.|... ..|+|||+|||||+.|+... ++.+++.++.+.|+.|+++|||++|++++|
T Consensus 55 ~~~~~~~i~~~~g~i~~~~y~P~~~---~~p~vv~~HGGg~~~g~~~~--~~~~~~~la~~~g~~Vv~vdYrlape~~~p 129 (318)
T PRK10162 55 MATRAYMVPTPYGQVETRLYYPQPD---SQATLFYLHGGGFILGNLDT--HDRIMRLLASYSGCTVIGIDYTLSPEARFP 129 (318)
T ss_pred ceEEEEEEecCCCceEEEEECCCCC---CCCEEEEEeCCcccCCCchh--hhHHHHHHHHHcCCEEEEecCCCCCCCCCC
Confidence 456777776 334699999999643 46999999999999888765 577899999778999999999999999999
Q ss_pred chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChHH
Q 040187 135 SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTESE 214 (299)
Q Consensus 135 ~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~ 214 (299)
..++|+.++++|+.++.. ++++|+++|+|+|+|+||++|+.++.++++.+..+..++++++++|+++... ..+.
T Consensus 130 ~~~~D~~~a~~~l~~~~~-----~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~-~~s~ 203 (318)
T PRK10162 130 QAIEEIVAVCCYFHQHAE-----DYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRD-SVSR 203 (318)
T ss_pred CcHHHHHHHHHHHHHhHH-----HhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCC-ChhH
Confidence 999999999999998865 6678999999999999999999999887765433457999999999988643 2222
Q ss_pred HhhcC-CCCcchhhHHHHHHHcCCCCCCCCcH----------------------------HHHHHHHHHHHCCCcEEEEE
Q 040187 215 MRFQR-DPLVGLKLTDWMWKAFLPEGSNRDHP----------------------------AANRYYEGLKKCGKDAYLIE 265 (299)
Q Consensus 215 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~l~~~g~~~~~~~ 265 (299)
..+.. ...+......+++..++....+...| ....|+++|+++|+++++++
T Consensus 204 ~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~de~~~~~~~L~~aGv~v~~~~ 283 (318)
T PRK10162 204 RLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKL 283 (318)
T ss_pred HHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcChHHHHHHHHHHcCCCEEEEE
Confidence 22222 22345556666666665432221111 11199999999999999999
Q ss_pred eCCCceEEEecC-CchHHHHHHHHHHHHHHhhhc
Q 040187 266 YPNAVHCFYLFP-EVLECSLFLKEVKDFICSQAA 298 (299)
Q Consensus 266 ~~g~~H~f~~~~-~~~~~~~~~~~i~~fl~~~~~ 298 (299)
|+|+.|+|..+. ..++++++++++.+|++++++
T Consensus 284 ~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 284 YPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred ECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 999999998775 348899999999999999875
No 3
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=100.00 E-value=8.1e-33 Score=238.85 Aligned_cols=223 Identities=27% Similarity=0.442 Sum_probs=177.5
Q ss_pred CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHH
Q 040187 65 ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDAL 144 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~ 144 (299)
.+..+++++|.|......+.|+|||+|||||+.|+... ++..+..++...|+.|+++|||++|+++||..++|+.+++
T Consensus 60 ~~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~--~~~~~~~~~~~~g~~vv~vdYrlaPe~~~p~~~~d~~~a~ 137 (312)
T COG0657 60 SGDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRT--HDALVARLAAAAGAVVVSVDYRLAPEHPFPAALEDAYAAY 137 (312)
T ss_pred CCCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhh--hHHHHHHHHHHcCCEEEecCCCCCCCCCCCchHHHHHHHH
Confidence 55669999999932222568999999999999998876 5788999999999999999999999999999999999999
Q ss_pred HHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChHHHhhcCCCCcc
Q 040187 145 KFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTESEMRFQRDPLVG 224 (299)
Q Consensus 145 ~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~ 224 (299)
.|+.++.. ++++|+++|+|+|+|+||++|+.++...+++ ....+.++++++|+++......+...+...+.+.
T Consensus 138 ~~l~~~~~-----~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~--~~~~p~~~~li~P~~d~~~~~~~~~~~~~~~~~~ 210 (312)
T COG0657 138 RWLRANAA-----ELGIDPSRIAVAGDSAGGHLALALALAARDR--GLPLPAAQVLISPLLDLTSSAASLPGYGEADLLD 210 (312)
T ss_pred HHHHhhhH-----hhCCCccceEEEecCcccHHHHHHHHHHHhc--CCCCceEEEEEecccCCcccccchhhcCCccccC
Confidence 99999985 7889999999999999999999999998766 3457899999999998775223333333444444
Q ss_pred hhhHH-HHHHHcCCCCCCCCc----------------------------HHHHHHHHHHHHCCCcEEEEEeCCCceEEEe
Q 040187 225 LKLTD-WMWKAFLPEGSNRDH----------------------------PAANRYYEGLKKCGKDAYLIEYPNAVHCFYL 275 (299)
Q Consensus 225 ~~~~~-~~~~~~~~~~~~~~~----------------------------~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~ 275 (299)
..... ++...+.....+... +....|.++|+++|++++++.++|+.|+|..
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~lPP~~i~~a~~D~l~~~~~~~a~~L~~agv~~~~~~~~g~~H~f~~ 290 (312)
T COG0657 211 AAAILAWFADLYLGAAPDREDPEASPLASDDLSGLPPTLIQTAEFDPLRDEGEAYAERLRAAGVPVELRVYPGMIHGFDL 290 (312)
T ss_pred HHHHHHHHHHHhCcCccccCCCccCccccccccCCCCEEEEecCCCcchhHHHHHHHHHHHcCCeEEEEEeCCcceeccc
Confidence 44433 555555543222111 1111999999999999999999999999977
Q ss_pred cCCchHHHHHHHHHHHHHHhhh
Q 040187 276 FPEVLECSLFLKEVKDFICSQA 297 (299)
Q Consensus 276 ~~~~~~~~~~~~~i~~fl~~~~ 297 (299)
... +++.+.+..+.+|+++.+
T Consensus 291 ~~~-~~a~~~~~~~~~~l~~~~ 311 (312)
T COG0657 291 LTG-PEARSALRQIAAFLRAAL 311 (312)
T ss_pred cCc-HHHHHHHHHHHHHHHHhc
Confidence 765 678888999999998543
No 4
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.97 E-value=4.9e-31 Score=215.29 Aligned_cols=178 Identities=35% Similarity=0.539 Sum_probs=136.9
Q ss_pred EEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcE
Q 040187 87 IVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQC 166 (299)
Q Consensus 87 vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i 166 (299)
|||||||||+.|+... +..++..++.+.|+.|+++|||++|+.++|+.++|+.++++|+.++.. ++++|+++|
T Consensus 1 v~~~HGGg~~~g~~~~--~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~-----~~~~d~~~i 73 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKES--HWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNAD-----KLGIDPERI 73 (211)
T ss_dssp EEEE--STTTSCGTTT--HHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHH-----HHTEEEEEE
T ss_pred CEEECCcccccCChHH--HHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccc-----cccccccce
Confidence 7999999999998876 578899999778999999999999999999999999999999999964 566899999
Q ss_pred EEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCC-CCCChHH---HhhcCCCCcchhhHHHHHHHcCCCCCCC
Q 040187 167 FLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGG-EERTESE---MRFQRDPLVGLKLTDWMWKAFLPEGSNR 242 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (299)
+|+|+|+||++|+.++.+..+.+ ...++++++++|+++. ....+.. ......+++......+++..+.+ ..+.
T Consensus 74 ~l~G~SAGg~la~~~~~~~~~~~--~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 150 (211)
T PF07859_consen 74 VLIGDSAGGHLALSLALRARDRG--LPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLP-GSDR 150 (211)
T ss_dssp EEEEETHHHHHHHHHHHHHHHTT--TCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHS-TGGT
T ss_pred EEeecccccchhhhhhhhhhhhc--ccchhhhhcccccccchhcccccccccccccccccccccccccccccccc-cccc
Confidence 99999999999999999877653 2469999999999887 3333433 22344566666666666665543 1111
Q ss_pred Cc----------------------------HHHHHHHHHHHHCCCcEEEEEeCCCceEEE
Q 040187 243 DH----------------------------PAANRYYEGLKKCGKDAYLIEYPNAVHCFY 274 (299)
Q Consensus 243 ~~----------------------------~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~ 274 (299)
.+ +....|+++|++.|+++++++++|+.|+|.
T Consensus 151 ~~~~~sp~~~~~~~~~Pp~~i~~g~~D~l~~~~~~~~~~L~~~gv~v~~~~~~g~~H~f~ 210 (211)
T PF07859_consen 151 DDPLASPLNASDLKGLPPTLIIHGEDDVLVDDSLRFAEKLKKAGVDVELHVYPGMPHGFF 210 (211)
T ss_dssp TSTTTSGGGSSCCTTCHEEEEEEETTSTTHHHHHHHHHHHHHTT-EEEEEEETTEETTGG
T ss_pred cccccccccccccccCCCeeeeccccccchHHHHHHHHHHHHCCCCEEEEEECCCeEEee
Confidence 11 111199999999999999999999999875
No 5
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.88 E-value=3.3e-21 Score=180.00 Aligned_cols=221 Identities=21% Similarity=0.207 Sum_probs=157.1
Q ss_pred eEEEEEEc--CCCCEEEEEEecCCCC-CCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCC--
Q 040187 57 TSFDVSVD--ATRDLWFRLYSPTNTT-ATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEH-- 131 (299)
Q Consensus 57 ~~~~~~~~--~~~~i~~~i~~P~~~~-~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~-- 131 (299)
+.+.+++. ++..+...+++|.+.. .++.|+|||+|||....-. ..+....+.++ ..||+|+.++||++.++
T Consensus 364 ~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~---~~~~~~~q~~~-~~G~~V~~~n~RGS~GyG~ 439 (620)
T COG1506 364 EPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVG---YSFNPEIQVLA-SAGYAVLAPNYRGSTGYGR 439 (620)
T ss_pred CceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccc---cccchhhHHHh-cCCeEEEEeCCCCCCccHH
Confidence 45666776 5668999999998763 2447999999999743222 23667778887 88999999999988653
Q ss_pred ---------CCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEec
Q 040187 132 ---------RCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQ 202 (299)
Q Consensus 132 ---------~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~ 202 (299)
.....++|+.++++|+.+... +|++||+++|+|.||++++.++.+ .+ .+++++..+
T Consensus 440 ~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~--------~d~~ri~i~G~SyGGymtl~~~~~------~~-~f~a~~~~~ 504 (620)
T COG1506 440 EFADAIRGDWGGVDLEDLIAAVDALVKLPL--------VDPERIGITGGSYGGYMTLLAATK------TP-RFKAAVAVA 504 (620)
T ss_pred HHHHhhhhccCCccHHHHHHHHHHHHhCCC--------cChHHeEEeccChHHHHHHHHHhc------Cc-hhheEEecc
Confidence 223578999999999988774 899999999999999999999986 33 678888777
Q ss_pred ccCCCCCCC----hHH----HhhcCCCCcchhhHHHH-----------HHHcCCCCCCCCcHHHH--HHHHHHHHCCCcE
Q 040187 203 PFFGGEERT----ESE----MRFQRDPLVGLKLTDWM-----------WKAFLPEGSNRDHPAAN--RYYEGLKKCGKDA 261 (299)
Q Consensus 203 p~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~--~~~~~l~~~g~~~ 261 (299)
+.++..... ... ......+....+..... ...++++..|...|..+ .|.++|+..|+++
T Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~ 584 (620)
T COG1506 505 GGVDWLLYFGESTEGLRFDPEENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPV 584 (620)
T ss_pred CcchhhhhccccchhhcCCHHHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceE
Confidence 754422110 000 01111111000101000 01245556666666555 9999999999999
Q ss_pred EEEEeCCCceEEEecCCchHHHHHHHHHHHHHHhhhcC
Q 040187 262 YLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICSQAAK 299 (299)
Q Consensus 262 ~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~~~~~ 299 (299)
++++||+++|.+... +...+.++++.+|++++++.
T Consensus 585 ~~~~~p~e~H~~~~~---~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 585 ELVVFPDEGHGFSRP---ENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred EEEEeCCCCcCCCCc---hhHHHHHHHHHHHHHHHhcC
Confidence 999999999988763 56888999999999999863
No 6
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=99.85 E-value=2.5e-20 Score=162.77 Aligned_cols=113 Identities=32% Similarity=0.376 Sum_probs=99.2
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACAD 162 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d 162 (299)
..-+|+++|||||+.-+ +..+..+++.+|.+.|+.|+++||.++||.+||..++++.-|+-|+++|.. ..|..
T Consensus 395 S~sli~HcHGGGfVAqs--SkSHE~YLr~Wa~aL~cPiiSVdYSLAPEaPFPRaleEv~fAYcW~inn~a-----llG~T 467 (880)
T KOG4388|consen 395 SRSLIVHCHGGGFVAQS--SKSHEPYLRSWAQALGCPIISVDYSLAPEAPFPRALEEVFFAYCWAINNCA-----LLGST 467 (880)
T ss_pred CceEEEEecCCceeeec--cccccHHHHHHHHHhCCCeEEeeeccCCCCCCCcHHHHHHHHHHHHhcCHH-----HhCcc
Confidence 45689999999998554 344789999999999999999999999999999999999999999999985 56778
Q ss_pred CCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
.+||++.|+|+||++.+.+++++.+.+. ..+.|+++-||.
T Consensus 468 gEriv~aGDSAGgNL~~~VaLr~i~~gv--RvPDGl~laY~p 507 (880)
T KOG4388|consen 468 GERIVLAGDSAGGNLCFTVALRAIAYGV--RVPDGLMLAYPP 507 (880)
T ss_pred cceEEEeccCCCcceeehhHHHHHHhCC--CCCCceEEecCh
Confidence 8999999999999999999999876654 357888887764
No 7
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.82 E-value=1.8e-19 Score=147.26 Aligned_cols=175 Identities=20% Similarity=0.184 Sum_probs=121.5
Q ss_pred HHHHHHHhhCCcEEEeecCCCCCCCC----------C-CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhH
Q 040187 107 DACRRLAVEVPAVVISVNYRRSPEHR----------C-PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGG 175 (299)
Q Consensus 107 ~~~~~la~~~g~~v~~~dyr~~~~~~----------~-~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG 175 (299)
.....|+ +.||+|+.+|||++++.. . ...++|+.++++|+.++.. +|++||+++|+|+||
T Consensus 5 ~~~~~la-~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~--------iD~~ri~i~G~S~GG 75 (213)
T PF00326_consen 5 WNAQLLA-SQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYY--------IDPDRIGIMGHSYGG 75 (213)
T ss_dssp HHHHHHH-TTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTS--------EEEEEEEEEEETHHH
T ss_pred HHHHHHH-hCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhcccc--------ccceeEEEEcccccc
Confidence 3455565 889999999999987421 1 2457999999999988763 899999999999999
Q ss_pred HHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChHH-------HhhcCCCCcchhhHHHHHHH-------------c
Q 040187 176 NLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTESE-------MRFQRDPLVGLKLTDWMWKA-------------F 235 (299)
Q Consensus 176 ~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-------------~ 235 (299)
++|+.++.+ .+..++++++.+|+++........ ......+....+........ +
T Consensus 76 ~~a~~~~~~------~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~P~li 149 (213)
T PF00326_consen 76 YLALLAATQ------HPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPEFYRELSPISPADNVQIKPPVLI 149 (213)
T ss_dssp HHHHHHHHH------TCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHHHHHHHHHGGGGGGCGGGSEEEE
T ss_pred cccchhhcc------cceeeeeeeccceecchhcccccccccccccccccCccchhhhhhhhhccccccccccCCCCEEE
Confidence 999999997 566899999999998866443221 11112222222222111111 2
Q ss_pred CCCCCCCCcHHHH--HHHHHHHHCCCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHHhhhcC
Q 040187 236 LPEGSNRDHPAAN--RYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICSQAAK 299 (299)
Q Consensus 236 ~~~~~~~~~~~~~--~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~~~~~ 299 (299)
+.+..|...|... ++.++|++.|+++++++||+++|++... +...+..+.+.+|+++++++
T Consensus 150 ~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~---~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 150 IHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNP---ENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp EEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSH---HHHHHHHHHHHHHHHHHTT-
T ss_pred EccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCc---hhHHHHHHHHHHHHHHHcCC
Confidence 2234455555544 9999999999999999999999965443 45668999999999999874
No 8
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.81 E-value=1.8e-17 Score=140.52 Aligned_cols=211 Identities=14% Similarity=0.177 Sum_probs=129.5
Q ss_pred CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecC--CCCCCCC----------
Q 040187 65 ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNY--RRSPEHR---------- 132 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dy--r~~~~~~---------- 132 (299)
.+..+.+.+|.|++...++.|+|+++||.+ ++............++.+.|+.|+.||+ |+.....
T Consensus 23 ~~~~~~~~v~~P~~~~~~~~P~vvllHG~~---~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~ 99 (275)
T TIGR02821 23 CGVPMTFGVFLPPQAAAGPVPVLWYLSGLT---CTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKG 99 (275)
T ss_pred cCCceEEEEEcCCCccCCCCCEEEEccCCC---CCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCC
Confidence 345677999999865335789999999965 2333322233355777678999999998 3321100
Q ss_pred ---C------C-----chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceE
Q 040187 133 ---C------P-----SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGL 198 (299)
Q Consensus 133 ---~------~-----~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~ 198 (299)
+ + .....+.+.+..+.+. .++++.++++++|+||||++|+.++.+ .+..++++
T Consensus 100 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~~~~~G~S~GG~~a~~~a~~------~p~~~~~~ 166 (275)
T TIGR02821 100 AGFYVDATEEPWSQHYRMYSYIVQELPALVAA-------QFPLDGERQGITGHSMGGHGALVIALK------NPDRFKSV 166 (275)
T ss_pred ccccccCCcCcccccchHHHHHHHHHHHHHHh-------hCCCCCCceEEEEEChhHHHHHHHHHh------CcccceEE
Confidence 0 0 1112222333333332 234688999999999999999999998 56678999
Q ss_pred EEecccCCCCCCChH---HHh-hcCCCC-cchhhHHHH-------HHHcC-CCCCCCCcHH---HHHHHHHHHHCCCcEE
Q 040187 199 IAIQPFFGGEERTES---EMR-FQRDPL-VGLKLTDWM-------WKAFL-PEGSNRDHPA---ANRYYEGLKKCGKDAY 262 (299)
Q Consensus 199 i~~~p~~~~~~~~~~---~~~-~~~~~~-~~~~~~~~~-------~~~~~-~~~~~~~~~~---~~~~~~~l~~~g~~~~ 262 (299)
++++|+.+....... ... ....+- ......... ...++ .+..|...+. ...+.++|+++|++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~~v~ 246 (275)
T TIGR02821 167 SAFAPIVAPSRCPWGQKAFSAYLGADEAAWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQALT 246 (275)
T ss_pred EEECCccCcccCcchHHHHHHHhcccccchhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCCCeE
Confidence 999998764322110 000 101000 000000000 01122 2334444443 2378999999999999
Q ss_pred EEEeCCCceEEEecCCchHHHHHHHHHHHHHHhhh
Q 040187 263 LIEYPNAVHCFYLFPEVLECSLFLKEVKDFICSQA 297 (299)
Q Consensus 263 ~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~~~ 297 (299)
+..+||++|+|..+ ...+.+.++|..+++
T Consensus 247 ~~~~~g~~H~f~~~------~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 247 LRRQAGYDHSYYFI------ASFIADHLRHHAERL 275 (275)
T ss_pred EEEeCCCCccchhH------HHhHHHHHHHHHhhC
Confidence 99999999999875 467778888877653
No 9
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=99.80 E-value=4e-18 Score=145.83 Aligned_cols=128 Identities=23% Similarity=0.337 Sum_probs=96.5
Q ss_pred CEEEEEEe-cCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHh-hCCcEEEeecCCCCC----CCCCCchhHHHH
Q 040187 68 DLWFRLYS-PTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAV-EVPAVVISVNYRRSP----EHRCPSQYEDGI 141 (299)
Q Consensus 68 ~i~~~i~~-P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~-~~g~~v~~~dyr~~~----~~~~~~~~~D~~ 141 (299)
...+.++. |.....+..|+|||+|||||..+.... +-.++..+.. --...++.+||.+++ ++.+|.++.++.
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGGGY~l~~~p~--qi~~L~~i~~~l~~~SILvLDYsLt~~~~~~~~yPtQL~qlv 182 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGGGYFLGTTPS--QIEFLLNIYKLLPEVSILVLDYSLTSSDEHGHKYPTQLRQLV 182 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCCeeEecCCHH--HHHHHHHHHHHcCCCeEEEEeccccccccCCCcCchHHHHHH
Confidence 44466666 765333457999999999998776443 2222222211 115689999999988 789999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCC
Q 040187 142 DALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 142 ~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 208 (299)
+.+++|.+.. ..++|.|+|+||||++++.+.+.+.... ....++.+|++|||+...
T Consensus 183 ~~Y~~Lv~~~----------G~~nI~LmGDSAGGnL~Ls~LqyL~~~~-~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 183 ATYDYLVESE----------GNKNIILMGDSAGGNLALSFLQYLKKPN-KLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHhcc----------CCCeEEEEecCccHHHHHHHHHHHhhcC-CCCCCceeEEECCCcCCc
Confidence 9999999543 3478999999999999999998876532 335789999999999866
No 10
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.80 E-value=2e-18 Score=141.49 Aligned_cols=193 Identities=18% Similarity=0.111 Sum_probs=126.4
Q ss_pred EEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCC-CCC---------------
Q 040187 70 WFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPE-HRC--------------- 133 (299)
Q Consensus 70 ~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~-~~~--------------- 133 (299)
...++.|++. ++.|+||++|+- .|-. .....++++|| +.||.|++||+..... ...
T Consensus 2 ~ay~~~P~~~--~~~~~Vvv~~d~---~G~~--~~~~~~ad~lA-~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~ 73 (218)
T PF01738_consen 2 DAYVARPEGG--GPRPAVVVIHDI---FGLN--PNIRDLADRLA-EEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAP 73 (218)
T ss_dssp EEEEEEETTS--SSEEEEEEE-BT---TBS---HHHHHHHHHHH-HTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHH
T ss_pred eEEEEeCCCC--CCCCEEEEEcCC---CCCc--hHHHHHHHHHH-hcCCCEEecccccCCCCCccchhhHHHHHHHHHhh
Confidence 4567788876 688999999993 2322 33567899998 7799999999754322 110
Q ss_pred --CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCC
Q 040187 134 --PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERT 211 (299)
Q Consensus 134 --~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~ 211 (299)
....+|+.+++++|.++.. ++.++|+++|+|+||.+|+.++.+ . ..+++++.++|...... .
T Consensus 74 ~~~~~~~~~~aa~~~l~~~~~--------~~~~kig~vGfc~GG~~a~~~a~~------~-~~~~a~v~~yg~~~~~~-~ 137 (218)
T PF01738_consen 74 RPEQVAADLQAAVDYLRAQPE--------VDPGKIGVVGFCWGGKLALLLAAR------D-PRVDAAVSFYGGSPPPP-P 137 (218)
T ss_dssp SHHHHHHHHHHHHHHHHCTTT--------CEEEEEEEEEETHHHHHHHHHHCC------T-TTSSEEEEES-SSSGGG-H
T ss_pred hHHHHHHHHHHHHHHHHhccc--------cCCCcEEEEEEecchHHhhhhhhh------c-cccceEEEEcCCCCCCc-c
Confidence 0124677788999988763 678999999999999999998864 2 47899999999111000 0
Q ss_pred hHHHhhcCCCCcchhhHHHHHHHcCCCCCCCCcHHH--HHHHHHHHHCCCcEEEEEeCCCceEEEecCCc----hHHHHH
Q 040187 212 ESEMRFQRDPLVGLKLTDWMWKAFLPEGSNRDHPAA--NRYYEGLKKCGKDAYLIEYPNAVHCFYLFPEV----LECSLF 285 (299)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~----~~~~~~ 285 (299)
.........|+ .++....|...+.. ..+.+.|+++|.++++++|+|+.|+|...... +.++++
T Consensus 138 ~~~~~~~~~P~-----------l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a 206 (218)
T PF01738_consen 138 LEDAPKIKAPV-----------LILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDA 206 (218)
T ss_dssp HHHGGG--S-E-----------EEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHH
T ss_pred hhhhcccCCCE-----------eecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHH
Confidence 00111112333 22333344444433 37889999999999999999999999886433 678999
Q ss_pred HHHHHHHHHhhh
Q 040187 286 LKEVKDFICSQA 297 (299)
Q Consensus 286 ~~~i~~fl~~~~ 297 (299)
++.+.+|++++|
T Consensus 207 ~~~~~~ff~~~L 218 (218)
T PF01738_consen 207 WQRTLAFFKRHL 218 (218)
T ss_dssp HHHHHHHHCC--
T ss_pred HHHHHHHHHhcC
Confidence 999999999986
No 11
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.79 E-value=4.2e-17 Score=134.22 Aligned_cols=204 Identities=20% Similarity=0.181 Sum_probs=145.5
Q ss_pred EEEEEc-CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCC--CCCC----
Q 040187 59 FDVSVD-ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRR--SPEH---- 131 (299)
Q Consensus 59 ~~~~~~-~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~--~~~~---- 131 (299)
++++++ ++..+...++.|++. .+.|+||.+|+ +.|-.. ..+..++++| ..||.|++||.-. .+..
T Consensus 3 ~~v~~~~~~~~~~~~~a~P~~~--~~~P~VIv~he---i~Gl~~--~i~~~a~rlA-~~Gy~v~~Pdl~~~~~~~~~~~~ 74 (236)
T COG0412 3 TDVTIPAPDGELPAYLARPAGA--GGFPGVIVLHE---IFGLNP--HIRDVARRLA-KAGYVVLAPDLYGRQGDPTDIED 74 (236)
T ss_pred cceEeeCCCceEeEEEecCCcC--CCCCEEEEEec---ccCCch--HHHHHHHHHH-hCCcEEEechhhccCCCCCcccc
Confidence 345555 346788888899876 45599999999 223322 3788999998 7799999999542 1111
Q ss_pred -------------CCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceE
Q 040187 132 -------------RCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGL 198 (299)
Q Consensus 132 -------------~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~ 198 (299)
.......|+.++++||..+.. ++.++|+++|+|+||.+|+.++.+ ...+++.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~--------~~~~~ig~~GfC~GG~~a~~~a~~-------~~~v~a~ 139 (236)
T COG0412 75 EPAELETGLVERVDPAEVLADIDAALDYLARQPQ--------VDPKRIGVVGFCMGGGLALLAATR-------APEVKAA 139 (236)
T ss_pred cHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCC--------CCCceEEEEEEcccHHHHHHhhcc-------cCCccEE
Confidence 112456899999999988763 689999999999999999999975 2279999
Q ss_pred EEecccCCCCCCChHHHhhcCCCCcchhhHHHHHHHcCCCCCCCCcHH--HHHHHHHHHHCCCcEEEEEeCCCceEEEec
Q 040187 199 IAIQPFFGGEERTESEMRFQRDPLVGLKLTDWMWKAFLPEGSNRDHPA--ANRYYEGLKKCGKDAYLIEYPNAVHCFYLF 276 (299)
Q Consensus 199 i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~ 276 (299)
++++|......... ....+.|++ +.....|...|. ...+.+++.++++.+++.+|+++.|+|...
T Consensus 140 v~fyg~~~~~~~~~--~~~~~~pvl-----------~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~ 206 (236)
T COG0412 140 VAFYGGLIADDTAD--APKIKVPVL-----------LHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFAND 206 (236)
T ss_pred EEecCCCCCCcccc--cccccCcEE-----------EEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccC
Confidence 99999865332221 111122331 122223332222 237888999999999999999999999964
Q ss_pred C-----Cc--hHHHHHHHHHHHHHHhhhc
Q 040187 277 P-----EV--LECSLFLKEVKDFICSQAA 298 (299)
Q Consensus 277 ~-----~~--~~~~~~~~~i~~fl~~~~~ 298 (299)
. .. ..++..++++.+|+++++.
T Consensus 207 ~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 207 RADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 2 22 6789999999999999875
No 12
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=99.78 E-value=4.3e-19 Score=154.43 Aligned_cols=130 Identities=28% Similarity=0.420 Sum_probs=103.1
Q ss_pred CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCC-------------
Q 040187 65 ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEH------------- 131 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~------------- 131 (299)
+.+|+.+.||.|. ...++.|||||||||+|.+|+.+...|+. ..|+++.+++||+++||+..-.
T Consensus 76 sEDCL~LNIwaP~-~~a~~~PVmV~IHGG~y~~Gs~s~~~ydg--s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~ 152 (491)
T COG2272 76 SEDCLYLNIWAPE-VPAEKLPVMVYIHGGGYIMGSGSEPLYDG--SALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAF 152 (491)
T ss_pred cccceeEEeeccC-CCCCCCcEEEEEeccccccCCCcccccCh--HHHHhcCCEEEEEeCcccccceeeehhhccccccc
Confidence 5789999999999 32368999999999999999988765654 5677554499999999975311
Q ss_pred CCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 132 RCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 132 ~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
.-.-.+.|+..|++|+++|.+ .+|.|+++|.|+|+|+||+.++.+...-. ....+.-+|++||.+.
T Consensus 153 ~~n~Gl~DqilALkWV~~NIe-----~FGGDp~NVTl~GeSAGa~si~~Lla~P~----AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 153 ASNLGLLDQILALKWVRDNIE-----AFGGDPQNVTLFGESAGAASILTLLAVPS----AKGLFHRAIALSGAAS 218 (491)
T ss_pred cccccHHHHHHHHHHHHHHHH-----HhCCCccceEEeeccchHHHHHHhhcCcc----chHHHHHHHHhCCCCC
Confidence 112468999999999999997 88999999999999999998888876422 2235677778887654
No 13
>PRK10115 protease 2; Provisional
Probab=99.77 E-value=1.7e-17 Score=156.17 Aligned_cols=223 Identities=17% Similarity=0.078 Sum_probs=149.8
Q ss_pred CCceEEEEEEc--CCCCEEEEEE-ecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCC
Q 040187 54 NGVTSFDVSVD--ATRDLWFRLY-SPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPE 130 (299)
Q Consensus 54 ~~~~~~~~~~~--~~~~i~~~i~-~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~ 130 (299)
.....+.+.+. ||..|++.+. .|.....++.|+||++|||... .....+......++ ++|++|+.+++|++++
T Consensus 412 ~~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~---~~~p~f~~~~~~l~-~rG~~v~~~n~RGs~g 487 (686)
T PRK10115 412 ANYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGA---SIDADFSFSRLSLL-DRGFVYAIVHVRGGGE 487 (686)
T ss_pred cccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCC---CCCCCccHHHHHHH-HCCcEEEEEEcCCCCc
Confidence 35567777775 6777887544 4543323567999999997643 33333555566776 7899999999999876
Q ss_pred CC-----------CCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEE
Q 040187 131 HR-----------CPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLI 199 (299)
Q Consensus 131 ~~-----------~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i 199 (299)
.. -...++|+.++.+||.++.. +|++|++++|.|+||.++..++.+ .+..++|+|
T Consensus 488 ~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~--------~d~~rl~i~G~S~GG~l~~~~~~~------~Pdlf~A~v 553 (686)
T PRK10115 488 LGQQWYEDGKFLKKKNTFNDYLDACDALLKLGY--------GSPSLCYGMGGSAGGMLMGVAINQ------RPELFHGVI 553 (686)
T ss_pred cCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCC--------CChHHeEEEEECHHHHHHHHHHhc------ChhheeEEE
Confidence 43 12568999999999998875 799999999999999999999876 567899999
Q ss_pred EecccCCCCCC--------ChHHHhhcCCCCcchhhHHHHHHHc----------------CCCCCCCCcHHHH--HHHHH
Q 040187 200 AIQPFFGGEER--------TESEMRFQRDPLVGLKLTDWMWKAF----------------LPEGSNRDHPAAN--RYYEG 253 (299)
Q Consensus 200 ~~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~--~~~~~ 253 (299)
+..|++|.... ........+.|.. .+ ...++..+ +.+..|...|... +|+.+
T Consensus 554 ~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~-~~-~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~ 631 (686)
T PRK10115 554 AQVPFVDVVTTMLDESIPLTTGEFEEWGNPQD-PQ-YYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAK 631 (686)
T ss_pred ecCCchhHhhhcccCCCCCChhHHHHhCCCCC-HH-HHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHH
Confidence 99998875421 1111111122221 11 11122211 2334444444444 99999
Q ss_pred HHHCCCcEEEEEe---CCCceEEEecCCchHHHHHHHHHHHHHHhhhc
Q 040187 254 LKKCGKDAYLIEY---PNAVHCFYLFPEVLECSLFLKEVKDFICSQAA 298 (299)
Q Consensus 254 l~~~g~~~~~~~~---~g~~H~f~~~~~~~~~~~~~~~i~~fl~~~~~ 298 (299)
|++.+.++++.++ ++++|+... + ....-+.......||-.+++
T Consensus 632 Lr~~~~~~~~vl~~~~~~~GHg~~~-~-r~~~~~~~A~~~aFl~~~~~ 677 (686)
T PRK10115 632 LRELKTDDHLLLLCTDMDSGHGGKS-G-RFKSYEGVAMEYAFLIALAQ 677 (686)
T ss_pred HHhcCCCCceEEEEecCCCCCCCCc-C-HHHHHHHHHHHHHHHHHHhC
Confidence 9999999888888 999998322 1 13344555566777776654
No 14
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.76 E-value=5.9e-17 Score=132.76 Aligned_cols=210 Identities=20% Similarity=0.242 Sum_probs=137.7
Q ss_pred CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC--------CCch
Q 040187 65 ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR--------CPSQ 136 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~--------~~~~ 136 (299)
.+..+....|.|...+ +++..|+++||.| ......+..++..|+ ..||.|+.+||++.+.+. +...
T Consensus 36 rG~~lft~~W~p~~~~-~pr~lv~~~HG~g----~~~s~~~~~~a~~l~-~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~ 109 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGT-EPRGLVFLCHGYG----EHSSWRYQSTAKRLA-KSGFAVYAIDYEGHGRSDGLHAYVPSFDLV 109 (313)
T ss_pred CCCEeEEEecccCCCC-CCceEEEEEcCCc----ccchhhHHHHHHHHH-hCCCeEEEeeccCCCcCCCCcccCCcHHHH
Confidence 5667888888896643 6788999999955 334455788999998 889999999999876543 3345
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChHHH-
Q 040187 137 YEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTESEM- 215 (299)
Q Consensus 137 ~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~- 215 (299)
++|+..-++.+..+.+ -..-..+++||||||.+|+.++.+ ++...+|+|+++|++..........
T Consensus 110 v~D~~~~~~~i~~~~e--------~~~lp~FL~GeSMGGAV~Ll~~~k------~p~~w~G~ilvaPmc~i~~~~kp~p~ 175 (313)
T KOG1455|consen 110 VDDVISFFDSIKEREE--------NKGLPRFLFGESMGGAVALLIALK------DPNFWDGAILVAPMCKISEDTKPHPP 175 (313)
T ss_pred HHHHHHHHHHHhhccc--------cCCCCeeeeecCcchHHHHHHHhh------CCcccccceeeecccccCCccCCCcH
Confidence 6788888887766653 234569999999999999999998 5667899999999875443221100
Q ss_pred -----------------------------------hhcCCCCcchh-----hHHHHHHH----------------cCCCC
Q 040187 216 -----------------------------------RFQRDPLVGLK-----LTDWMWKA----------------FLPEG 239 (299)
Q Consensus 216 -----------------------------------~~~~~~~~~~~-----~~~~~~~~----------------~~~~~ 239 (299)
.....|..... ...++.+. .+++.
T Consensus 176 v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~ 255 (313)
T KOG1455|consen 176 VISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGT 255 (313)
T ss_pred HHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecC
Confidence 00001110000 00000000 11111
Q ss_pred CC-CCcHHHH-HHHHHHHHCCCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHHhh
Q 040187 240 SN-RDHPAAN-RYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICSQ 296 (299)
Q Consensus 240 ~~-~~~~~~~-~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~~ 296 (299)
.| ..+|... ++++... ..+.++..|||+.|....-...++.+.++.+|++||.++
T Consensus 256 dD~VTDp~~Sk~Lye~A~--S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 256 DDKVTDPKVSKELYEKAS--SSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred CCcccCcHHHHHHHHhcc--CCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 11 1222222 4444332 467899999999998876444488999999999999875
No 15
>PRK10566 esterase; Provisional
Probab=99.76 E-value=1.1e-16 Score=133.90 Aligned_cols=201 Identities=17% Similarity=0.121 Sum_probs=120.2
Q ss_pred CEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCC-------CCC------
Q 040187 68 DLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEH-------RCP------ 134 (299)
Q Consensus 68 ~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~-------~~~------ 134 (299)
++....|.|.+...++.|+||++||.+ ++.. .+..+++.++ +.||.|+++|||+.+.. ...
T Consensus 11 ~~~~~~~~p~~~~~~~~p~vv~~HG~~---~~~~--~~~~~~~~l~-~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK10566 11 GIEVLHAFPAGQRDTPLPTVFFYHGFT---SSKL--VYSYFAVALA-QAGFRVIMPDAPMHGARFSGDEARRLNHFWQIL 84 (249)
T ss_pred CcceEEEcCCCCCCCCCCEEEEeCCCC---cccc--hHHHHHHHHH-hCCCEEEEecCCcccccCCCccccchhhHHHHH
Confidence 444455667643224679999999964 2332 2566778886 77999999999976432 111
Q ss_pred -chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEec--ccCCC----
Q 040187 135 -SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQ--PFFGG---- 207 (299)
Q Consensus 135 -~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~--p~~~~---- 207 (299)
..++|+.++++|+.+... ++.++|+++|||+||.+|+.++.+. + .+++.+.+. +++..
T Consensus 85 ~~~~~~~~~~~~~l~~~~~--------~~~~~i~v~G~S~Gg~~al~~~~~~------~-~~~~~~~~~~~~~~~~~~~~ 149 (249)
T PRK10566 85 LQNMQEFPTLRAAIREEGW--------LLDDRLAVGGASMGGMTALGIMARH------P-WVKCVASLMGSGYFTSLART 149 (249)
T ss_pred HHHHHHHHHHHHHHHhcCC--------cCccceeEEeecccHHHHHHHHHhC------C-CeeEEEEeeCcHHHHHHHHH
Confidence 234677777888876542 6889999999999999999998762 2 344443332 21110
Q ss_pred --CC--C-Ch---HHHhhcCCCCcc---hhhHHHH---HHHcCCCCCCCCcHHHH--HHHHHHHHCCC--cEEEEEeCCC
Q 040187 208 --EE--R-TE---SEMRFQRDPLVG---LKLTDWM---WKAFLPEGSNRDHPAAN--RYYEGLKKCGK--DAYLIEYPNA 269 (299)
Q Consensus 208 --~~--~-~~---~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~--~~~~~l~~~g~--~~~~~~~~g~ 269 (299)
.. . .+ ........++.. ....... ...++.+..|...|... ++.++++.+|. +++++.|+|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~ 229 (249)
T PRK10566 150 LFPPLIPETAAQQAEFNNIVAPLAEWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGV 229 (249)
T ss_pred hcccccccccccHHHHHHHHHHHhhcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCC
Confidence 00 0 00 000000000000 0000000 11233344555555433 78888988886 4899999999
Q ss_pred ceEEEecCCchHHHHHHHHHHHHHHhhh
Q 040187 270 VHCFYLFPEVLECSLFLKEVKDFICSQA 297 (299)
Q Consensus 270 ~H~f~~~~~~~~~~~~~~~i~~fl~~~~ 297 (299)
+|.+. .+.++++.+||++++
T Consensus 230 ~H~~~--------~~~~~~~~~fl~~~~ 249 (249)
T PRK10566 230 RHRIT--------PEALDAGVAFFRQHL 249 (249)
T ss_pred CCccC--------HHHHHHHHHHHHhhC
Confidence 99752 357899999999875
No 16
>PLN02442 S-formylglutathione hydrolase
Probab=99.76 E-value=6.3e-17 Score=137.57 Aligned_cols=213 Identities=13% Similarity=0.137 Sum_probs=126.1
Q ss_pred CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCC-----CC--------
Q 040187 65 ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSP-----EH-------- 131 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~-----~~-------- 131 (299)
-+..+.+.+|.|...+.++.|+|+++||++ ++........-+..++...|+.|+.+|....+ +.
T Consensus 28 l~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~---~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~ 104 (283)
T PLN02442 28 LGCSMTFSVYFPPASDSGKVPVLYWLSGLT---CTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVG 104 (283)
T ss_pred cCCceEEEEEcCCcccCCCCCEEEEecCCC---cChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCC
Confidence 357899999999854346789999999954 23322111122334555789999999964321 00
Q ss_pred -C-C-----C-----chhHHH-HHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceE
Q 040187 132 -R-C-----P-----SQYEDG-IDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGL 198 (299)
Q Consensus 132 -~-~-----~-----~~~~D~-~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~ 198 (299)
. + + ...+.+ .+...++.+... .+|.++++++|+|+||++|+.++.+ .+..++++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~-------~~~~~~~~i~G~S~GG~~a~~~a~~------~p~~~~~~ 171 (283)
T PLN02442 105 AGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFD-------QLDTSRASIFGHSMGGHGALTIYLK------NPDKYKSV 171 (283)
T ss_pred cceeeccccCCCcccchhhhHHHHHHHHHHHHHH-------hcCCCceEEEEEChhHHHHHHHHHh------CchhEEEE
Confidence 0 0 0 001112 222233333221 1478999999999999999999987 56689999
Q ss_pred EEecccCCCCCCCh-H--HHh-hcC--------CCCcchhhH--HHHHHHcCCCCCCCCcHH---HHHHHHHHHHCCCcE
Q 040187 199 IAIQPFFGGEERTE-S--EMR-FQR--------DPLVGLKLT--DWMWKAFLPEGSNRDHPA---ANRYYEGLKKCGKDA 261 (299)
Q Consensus 199 i~~~p~~~~~~~~~-~--~~~-~~~--------~~~~~~~~~--~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~g~~~ 261 (299)
++++|.++...... . ... +.. .+....... ....-.++.+..|...+. ...|.+.+++.|.++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l~~~g~~~ 251 (283)
T PLN02442 172 SAFAPIANPINCPWGQKAFTNYLGSDKADWEEYDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEACKEAGAPV 251 (283)
T ss_pred EEECCccCcccCchhhHHHHHHcCCChhhHHHcChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHHHHcCCCe
Confidence 99999876431110 0 000 000 000000000 000001223344444443 347889999999999
Q ss_pred EEEEeCCCceEEEecCCchHHHHHHHHHHHHHHhhhcC
Q 040187 262 YLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICSQAAK 299 (299)
Q Consensus 262 ~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~~~~~ 299 (299)
+++++||.+|.|. .....+++...|..+++++
T Consensus 252 ~~~~~pg~~H~~~------~~~~~i~~~~~~~~~~~~~ 283 (283)
T PLN02442 252 TLRLQPGYDHSYF------FIATFIDDHINHHAQALKS 283 (283)
T ss_pred EEEEeCCCCccHH------HHHHHHHHHHHHHHHHhcC
Confidence 9999999999765 3456677777777777653
No 17
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.76 E-value=2.5e-18 Score=132.24 Aligned_cols=134 Identities=19% Similarity=0.187 Sum_probs=110.8
Q ss_pred CCceEEEEEEcCCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCC-C
Q 040187 54 NGVTSFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEH-R 132 (299)
Q Consensus 54 ~~~~~~~~~~~~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~-~ 132 (299)
+...++++.|..++...+++|.|.+ ..|+.||+|||.|..|+... .... ..-|.++||.|.+++|-++|+. .
T Consensus 41 ~i~r~e~l~Yg~~g~q~VDIwg~~~----~~klfIfIHGGYW~~g~rk~--clsi-v~~a~~~gY~vasvgY~l~~q~ht 113 (270)
T KOG4627|consen 41 QIIRVEHLRYGEGGRQLVDIWGSTN----QAKLFIFIHGGYWQEGDRKM--CLSI-VGPAVRRGYRVASVGYNLCPQVHT 113 (270)
T ss_pred cccchhccccCCCCceEEEEecCCC----CccEEEEEecchhhcCchhc--ccch-hhhhhhcCeEEEEeccCcCccccc
Confidence 3456788999878799999999854 46899999999999888764 2333 3344589999999999999987 6
Q ss_pred CCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCC
Q 040187 133 CPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 133 ~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 208 (299)
....+.|....++|+.+..+ +.+.+.+.|||+|+++|+.+..+. +.+++.|++++++.++..
T Consensus 114 L~qt~~~~~~gv~filk~~~---------n~k~l~~gGHSaGAHLa~qav~R~-----r~prI~gl~l~~GvY~l~ 175 (270)
T KOG4627|consen 114 LEQTMTQFTHGVNFILKYTE---------NTKVLTFGGHSAGAHLAAQAVMRQ-----RSPRIWGLILLCGVYDLR 175 (270)
T ss_pred HHHHHHHHHHHHHHHHHhcc---------cceeEEEcccchHHHHHHHHHHHh-----cCchHHHHHHHhhHhhHH
Confidence 67788999999999999874 677899999999999999998875 445899999999987644
No 18
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.76 E-value=2.6e-16 Score=137.17 Aligned_cols=135 Identities=16% Similarity=0.203 Sum_probs=96.0
Q ss_pred CCCceEEEEEEc--CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCC
Q 040187 53 KNGVTSFDVSVD--ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPE 130 (299)
Q Consensus 53 ~~~~~~~~~~~~--~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~ 130 (299)
+.++..++..+. ++..+.++.+.|.+.. ...++||++||.| ++. ...+..++..|+ +.||.|+++|+|+.+.
T Consensus 27 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~-~~~~~VvllHG~~---~~~-~~~~~~~~~~L~-~~Gy~V~~~D~rGhG~ 100 (330)
T PLN02298 27 LKGIKGSKSFFTSPRGLSLFTRSWLPSSSS-PPRALIFMVHGYG---NDI-SWTFQSTAIFLA-QMGFACFALDLEGHGR 100 (330)
T ss_pred ccCCccccceEEcCCCCEEEEEEEecCCCC-CCceEEEEEcCCC---CCc-ceehhHHHHHHH-hCCCEEEEecCCCCCC
Confidence 445555554443 6677888888876431 3578999999954 122 223456667776 7799999999998765
Q ss_pred CCC--------CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEec
Q 040187 131 HRC--------PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQ 202 (299)
Q Consensus 131 ~~~--------~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~ 202 (299)
+.. ....+|+.++++++..... .+..+++|+||||||.+|+.++.+ .+..++++|+++
T Consensus 101 S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~--------~~~~~i~l~GhSmGG~ia~~~a~~------~p~~v~~lvl~~ 166 (330)
T PLN02298 101 SEGLRAYVPNVDLVVEDCLSFFNSVKQREE--------FQGLPRFLYGESMGGAICLLIHLA------NPEGFDGAVLVA 166 (330)
T ss_pred CCCccccCCCHHHHHHHHHHHHHHHHhccc--------CCCCCEEEEEecchhHHHHHHHhc------CcccceeEEEec
Confidence 432 1346788888888876431 234579999999999999998876 555799999999
Q ss_pred ccCCC
Q 040187 203 PFFGG 207 (299)
Q Consensus 203 p~~~~ 207 (299)
|+...
T Consensus 167 ~~~~~ 171 (330)
T PLN02298 167 PMCKI 171 (330)
T ss_pred ccccC
Confidence 97643
No 19
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=99.74 E-value=7.1e-18 Score=154.76 Aligned_cols=129 Identities=27% Similarity=0.360 Sum_probs=101.1
Q ss_pred CCCCEEEEEEecCCCC-CCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCC-cEEEeecCCCCCC---------CCC
Q 040187 65 ATRDLWFRLYSPTNTT-ATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVP-AVVISVNYRRSPE---------HRC 133 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~-~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g-~~v~~~dyr~~~~---------~~~ 133 (299)
+.+++.+++|+|.... .++.|+|||||||||..|+.... ....++.+.+ ++|++++||+.+- ...
T Consensus 75 sEdcl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~----~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~~~~~ 150 (493)
T cd00312 75 SEDCLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY----PGDGLAREGDNVIVVSINYRLGVLGFLSTGDIELPG 150 (493)
T ss_pred CCcCCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC----ChHHHHhcCCCEEEEEecccccccccccCCCCCCCc
Confidence 5789999999998642 36789999999999998887652 2244554544 9999999997542 233
Q ss_pred CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 134 PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 134 ~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
+..+.|+..|++|++++.. .+|+|+++|.|+|+|+||+++..++.... ....++++|+.++...
T Consensus 151 n~g~~D~~~al~wv~~~i~-----~fggd~~~v~~~G~SaG~~~~~~~~~~~~----~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 151 NYGLKDQRLALKWVQDNIA-----AFGGDPDSVTIFGESAGGASVSLLLLSPD----SKGLFHRAISQSGSAL 214 (493)
T ss_pred chhHHHHHHHHHHHHHHHH-----HhCCCcceEEEEeecHHHHHhhhHhhCcc----hhHHHHHHhhhcCCcc
Confidence 4568999999999999986 78899999999999999999998887532 1235888888887543
No 20
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.73 E-value=1.3e-15 Score=133.73 Aligned_cols=121 Identities=19% Similarity=0.264 Sum_probs=86.5
Q ss_pred CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC--------ch
Q 040187 65 ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP--------SQ 136 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~--------~~ 136 (299)
++..+.+..+.|.+. .+.|+||++||.|. +. ...+..++..|+ +.||.|+++|||+.+.+..+ ..
T Consensus 70 ~g~~l~~~~~~p~~~--~~~~~iv~lHG~~~---~~-~~~~~~~~~~l~-~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 142 (349)
T PLN02385 70 RGVEIFSKSWLPENS--RPKAAVCFCHGYGD---TC-TFFFEGIARKIA-SSGYGVFAMDYPGFGLSEGLHGYIPSFDDL 142 (349)
T ss_pred CCCEEEEEEEecCCC--CCCeEEEEECCCCC---cc-chHHHHHHHHHH-hCCCEEEEecCCCCCCCCCCCCCcCCHHHH
Confidence 556677777778643 46799999999542 21 222456777886 67999999999987654322 23
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 137 YEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 137 ~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
++|+.+.++++..... .+..+++|+||||||.+|+.++.+ .+..++++|+++|+..
T Consensus 143 ~~dv~~~l~~l~~~~~--------~~~~~~~LvGhSmGG~val~~a~~------~p~~v~glVLi~p~~~ 198 (349)
T PLN02385 143 VDDVIEHYSKIKGNPE--------FRGLPSFLFGQSMGGAVALKVHLK------QPNAWDGAILVAPMCK 198 (349)
T ss_pred HHHHHHHHHHHHhccc--------cCCCCEEEEEeccchHHHHHHHHh------CcchhhheeEeccccc
Confidence 4566666666644321 345689999999999999999987 5667999999998754
No 21
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=99.73 E-value=1.2e-17 Score=154.85 Aligned_cols=129 Identities=25% Similarity=0.385 Sum_probs=94.3
Q ss_pred CCCCEEEEEEecCCCCCC-CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCC-------CCC--C-C
Q 040187 65 ATRDLWFRLYSPTNTTAT-NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRS-------PEH--R-C 133 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~~~-~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~-------~~~--~-~ 133 (299)
+.+++.+.||+|...... +.||+||||||||..|+.....+.. ..++...+++||+++||+. ++. + .
T Consensus 105 sEDCL~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~--~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~g 182 (535)
T PF00135_consen 105 SEDCLYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDG--ASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSG 182 (535)
T ss_dssp ES---EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHT--HHHHHHHTSEEEEE----HHHHH-BSSSTTSHBS
T ss_pred CchHHHHhhhhccccccccccceEEEeecccccCCCcccccccc--cccccCCCEEEEEecccccccccccccccccCch
Confidence 457999999999987433 7899999999999999874332332 3344577999999999963 222 2 5
Q ss_pred CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 134 PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 134 ~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
...+.|...|++|++++.. .+|.|+++|.|+|+|+||..+..+...... ...++.+|+.|+.
T Consensus 183 N~Gl~Dq~~AL~WV~~nI~-----~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~----~~LF~raI~~SGs 244 (535)
T PF00135_consen 183 NYGLLDQRLALKWVQDNIA-----AFGGDPDNVTLFGQSAGAASVSLLLLSPSS----KGLFHRAILQSGS 244 (535)
T ss_dssp THHHHHHHHHHHHHHHHGG-----GGTEEEEEEEEEEETHHHHHHHHHHHGGGG----TTSBSEEEEES--
T ss_pred hhhhhhhHHHHHHHHhhhh-----hcccCCcceeeeeecccccccceeeecccc----ccccccccccccc
Confidence 6788999999999999997 899999999999999999999888776332 3469999999984
No 22
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.70 E-value=9.1e-15 Score=130.44 Aligned_cols=211 Identities=12% Similarity=0.032 Sum_probs=131.3
Q ss_pred eEEEEEEc--CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCC-
Q 040187 57 TSFDVSVD--ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRC- 133 (299)
Q Consensus 57 ~~~~~~~~--~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~- 133 (299)
..+.++++ ++..+...++.|... ++.|+||++||.+ +.....+..++..++ +.||.|+++|+|+.++...
T Consensus 167 ~~e~v~i~~~~g~~l~g~l~~P~~~--~~~P~Vli~gG~~----~~~~~~~~~~~~~La-~~Gy~vl~~D~pG~G~s~~~ 239 (414)
T PRK05077 167 ELKELEFPIPGGGPITGFLHLPKGD--GPFPTVLVCGGLD----SLQTDYYRLFRDYLA-PRGIAMLTIDMPSVGFSSKW 239 (414)
T ss_pred ceEEEEEEcCCCcEEEEEEEECCCC--CCccEEEEeCCcc----cchhhhHHHHHHHHH-hCCCEEEEECCCCCCCCCCC
Confidence 35666665 444788888889843 5789888766632 222223455677776 8899999999998765532
Q ss_pred C---chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCC
Q 040187 134 P---SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEER 210 (299)
Q Consensus 134 ~---~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 210 (299)
+ .......++++|+.+... +|.+||+++|+|+||++|+.+|.. .+.+++++|+++|.++....
T Consensus 240 ~~~~d~~~~~~avld~l~~~~~--------vd~~ri~l~G~S~GG~~Al~~A~~------~p~ri~a~V~~~~~~~~~~~ 305 (414)
T PRK05077 240 KLTQDSSLLHQAVLNALPNVPW--------VDHTRVAAFGFRFGANVAVRLAYL------EPPRLKAVACLGPVVHTLLT 305 (414)
T ss_pred CccccHHHHHHHHHHHHHhCcc--------cCcccEEEEEEChHHHHHHHHHHh------CCcCceEEEEECCccchhhc
Confidence 1 122233567788877653 789999999999999999999876 45579999999988642111
Q ss_pred Ch-------H-HHh-h---cCCCCcchhhHHHHHH------------------HcCCCCCCCCcHHHHHHHHHHHHCCCc
Q 040187 211 TE-------S-EMR-F---QRDPLVGLKLTDWMWK------------------AFLPEGSNRDHPAANRYYEGLKKCGKD 260 (299)
Q Consensus 211 ~~-------~-~~~-~---~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~l~~~g~~ 260 (299)
.. . ... . -..+....+....... .++.+..|...|. ...+.+.+...+
T Consensus 306 ~~~~~~~~p~~~~~~la~~lg~~~~~~~~l~~~l~~~sl~~~~~l~~~i~~PvLiI~G~~D~ivP~--~~a~~l~~~~~~ 383 (414)
T PRK05077 306 DPKRQQQVPEMYLDVLASRLGMHDASDEALRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPE--EDSRLIASSSAD 383 (414)
T ss_pred chhhhhhchHHHHHHHHHHhCCCCCChHHHHHHhhhccchhhhhhccCCCCcEEEEecCCCCCCCH--HHHHHHHHhCCC
Confidence 10 0 000 0 0000001010111000 1112233333444 335566666667
Q ss_pred EEEEEeCCCceEEEecCCchHHHHHHHHHHHHHHhhh
Q 040187 261 AYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICSQA 297 (299)
Q Consensus 261 ~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~~~ 297 (299)
.++.++|+..| + +...++++.+.+||++++
T Consensus 384 ~~l~~i~~~~~-~------e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 384 GKLLEIPFKPV-Y------RNFDKALQEISDWLEDRL 413 (414)
T ss_pred CeEEEccCCCc-c------CCHHHHHHHHHHHHHHHh
Confidence 89999999733 2 457899999999999886
No 23
>PHA02857 monoglyceride lipase; Provisional
Probab=99.70 E-value=6.1e-15 Score=125.22 Aligned_cols=117 Identities=16% Similarity=0.258 Sum_probs=88.2
Q ss_pred CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC--------ch
Q 040187 65 ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP--------SQ 136 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~--------~~ 136 (299)
+|..+.+++|.|.+ .+.|+|+++||.+. + ...+..++..++ +.||.|+++|+|+.+.+... ..
T Consensus 9 ~g~~l~~~~~~~~~---~~~~~v~llHG~~~---~--~~~~~~~~~~l~-~~g~~via~D~~G~G~S~~~~~~~~~~~~~ 79 (276)
T PHA02857 9 DNDYIYCKYWKPIT---YPKALVFISHGAGE---H--SGRYEELAENIS-SLGILVFSHDHIGHGRSNGEKMMIDDFGVY 79 (276)
T ss_pred CCCEEEEEeccCCC---CCCEEEEEeCCCcc---c--cchHHHHHHHHH-hCCCEEEEccCCCCCCCCCccCCcCCHHHH
Confidence 67788999998853 35688999999542 2 334778888887 67999999999987654321 23
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 137 YEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 137 ~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
++|+.+.+.++.+.. ...+++++|||+||.+|+.++.+ .+..++++|+++|...
T Consensus 80 ~~d~~~~l~~~~~~~----------~~~~~~lvG~S~GG~ia~~~a~~------~p~~i~~lil~~p~~~ 133 (276)
T PHA02857 80 VRDVVQHVVTIKSTY----------PGVPVFLLGHSMGATISILAAYK------NPNLFTAMILMSPLVN 133 (276)
T ss_pred HHHHHHHHHHHHhhC----------CCCCEEEEEcCchHHHHHHHHHh------CccccceEEEeccccc
Confidence 466666666665433 34679999999999999999987 5557999999999765
No 24
>PLN00021 chlorophyllase
Probab=99.69 E-value=2.6e-15 Score=128.66 Aligned_cols=144 Identities=18% Similarity=0.289 Sum_probs=102.4
Q ss_pred CceEEEEEEc--CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC
Q 040187 55 GVTSFDVSVD--ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR 132 (299)
Q Consensus 55 ~~~~~~~~~~--~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~ 132 (299)
.+...++.+. ....+++.+|+|... ++.|+|||+||+++ + ...+..+++.|+ +.||.|+++|++......
T Consensus 23 ~~~~~~~~~~~~~~~~~p~~v~~P~~~--g~~PvVv~lHG~~~---~--~~~y~~l~~~La-s~G~~VvapD~~g~~~~~ 94 (313)
T PLN00021 23 PVELITVDESSRPSPPKPLLVATPSEA--GTYPVLLFLHGYLL---Y--NSFYSQLLQHIA-SHGFIVVAPQLYTLAGPD 94 (313)
T ss_pred eeEEEEecCCCcCCCCceEEEEeCCCC--CCCCEEEEECCCCC---C--cccHHHHHHHHH-hCCCEEEEecCCCcCCCC
Confidence 3444555443 236799999999865 67899999999764 2 223678888887 679999999976532223
Q ss_pred CCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCC
Q 040187 133 CPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGG 207 (299)
Q Consensus 133 ~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 207 (299)
....++|+.++++|+.+.....-.-....|.++++++|||+||.+|+.++....+.. .+.+++++|+++|+...
T Consensus 95 ~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-~~~~v~ali~ldPv~g~ 168 (313)
T PLN00021 95 GTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS-LPLKFSALIGLDPVDGT 168 (313)
T ss_pred chhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc-cccceeeEEeecccccc
Confidence 345678888999999875321000012367899999999999999999998754321 12468999999998654
No 25
>PRK13604 luxD acyl transferase; Provisional
Probab=99.69 E-value=7.7e-15 Score=123.42 Aligned_cols=122 Identities=11% Similarity=0.054 Sum_probs=90.7
Q ss_pred EEEcCCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCC-CCCC-------
Q 040187 61 VSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRS-PEHR------- 132 (299)
Q Consensus 61 ~~~~~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~-~~~~------- 132 (299)
+...++..+...+..|......+.++||++||-+ +.. ..+..+++.|+ ++||.|+.+|+|+. +++.
T Consensus 14 ~~~~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~---~~~--~~~~~~A~~La-~~G~~vLrfD~rg~~GeS~G~~~~~t 87 (307)
T PRK13604 14 ICLENGQSIRVWETLPKENSPKKNNTILIASGFA---RRM--DHFAGLAEYLS-SNGFHVIRYDSLHHVGLSSGTIDEFT 87 (307)
T ss_pred EEcCCCCEEEEEEEcCcccCCCCCCEEEEeCCCC---CCh--HHHHHHHHHHH-HCCCEEEEecCCCCCCCCCCccccCc
Confidence 4445677777777778643335779999999933 222 23677888887 88999999998764 4432
Q ss_pred CCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCC
Q 040187 133 CPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGG 207 (299)
Q Consensus 133 ~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 207 (299)
.....+|+.++++|+.+.. .++|+|+||||||.+|+.+|.. ..++++|+.+|+.+.
T Consensus 88 ~s~g~~Dl~aaid~lk~~~-----------~~~I~LiG~SmGgava~~~A~~--------~~v~~lI~~sp~~~l 143 (307)
T PRK13604 88 MSIGKNSLLTVVDWLNTRG-----------INNLGLIAASLSARIAYEVINE--------IDLSFLITAVGVVNL 143 (307)
T ss_pred ccccHHHHHHHHHHHHhcC-----------CCceEEEEECHHHHHHHHHhcC--------CCCCEEEEcCCcccH
Confidence 2345789999999997743 4679999999999998766642 248999999998773
No 26
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.68 E-value=1.4e-14 Score=128.24 Aligned_cols=122 Identities=20% Similarity=0.249 Sum_probs=87.9
Q ss_pred CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC--------ch
Q 040187 65 ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP--------SQ 136 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~--------~~ 136 (299)
++..+.++.|.|... ...|+||++||.+ ++ ...+..++..|+ +.||.|+++|+|+.+.+..+ ..
T Consensus 119 ~~~~l~~~~~~p~~~--~~~~~Vl~lHG~~---~~--~~~~~~~a~~L~-~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~ 190 (395)
T PLN02652 119 RRNALFCRSWAPAAG--EMRGILIIIHGLN---EH--SGRYLHFAKQLT-SCGFGVYAMDWIGHGGSDGLHGYVPSLDYV 190 (395)
T ss_pred CCCEEEEEEecCCCC--CCceEEEEECCch---HH--HHHHHHHHHHHH-HCCCEEEEeCCCCCCCCCCCCCCCcCHHHH
Confidence 456788888888643 4578999999954 12 233677888887 77999999999987654322 23
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCC
Q 040187 137 YEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 137 ~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 208 (299)
.+|+..+++++.... +..+++++|||+||.+|+.++.+ .+ .+..++++|+.+|++...
T Consensus 191 ~~Dl~~~l~~l~~~~----------~~~~i~lvGhSmGG~ial~~a~~-p~---~~~~v~glVL~sP~l~~~ 248 (395)
T PLN02652 191 VEDTEAFLEKIRSEN----------PGVPCFLFGHSTGGAVVLKAASY-PS---IEDKLEGIVLTSPALRVK 248 (395)
T ss_pred HHHHHHHHHHHHHhC----------CCCCEEEEEECHHHHHHHHHHhc-cC---cccccceEEEECcccccc
Confidence 577788888876543 23479999999999999987653 11 123789999999986543
No 27
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.68 E-value=7.1e-15 Score=122.71 Aligned_cols=202 Identities=15% Similarity=0.131 Sum_probs=125.5
Q ss_pred CEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC-------CCchhHHH
Q 040187 68 DLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR-------CPSQYEDG 140 (299)
Q Consensus 68 ~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~-------~~~~~~D~ 140 (299)
.+...++.|... ++.|+||++||.|... +.....+..+++.|+ +.||.|+.+|||+.+.+. +....+|+
T Consensus 11 ~~~~~~~~p~~~--~~~~~VlllHG~g~~~-~~~~~~~~~la~~La-~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv 86 (266)
T TIGR03101 11 FRFCLYHPPVAV--GPRGVVIYLPPFAEEM-NKSRRMVALQARAFA-AGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDV 86 (266)
T ss_pred cEEEEEecCCCC--CCceEEEEECCCcccc-cchhHHHHHHHHHHH-HCCCEEEEECCCCCCCCCCccccCCHHHHHHHH
Confidence 344445555543 4579999999954211 111223455677886 789999999999876442 22346888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChHHHhh---
Q 040187 141 IDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTESEMRF--- 217 (299)
Q Consensus 141 ~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~--- 217 (299)
..+++|+.+.. .++|+|+|+|+||.+|+.++.+ .+..++++|+++|++.+........++
T Consensus 87 ~~ai~~L~~~~-----------~~~v~LvG~SmGG~vAl~~A~~------~p~~v~~lVL~~P~~~g~~~l~~~lrl~~~ 149 (266)
T TIGR03101 87 AAAYRWLIEQG-----------HPPVTLWGLRLGALLALDAANP------LAAKCNRLVLWQPVVSGKQQLQQFLRLRLV 149 (266)
T ss_pred HHHHHHHHhcC-----------CCCEEEEEECHHHHHHHHHHHh------CccccceEEEeccccchHHHHHHHHHHHHH
Confidence 89999987642 4689999999999999999877 445789999999987644222111000
Q ss_pred ----cCCC----------------------CcchhhHHHHHHHcCCCC----------------CCCCcHHHHHHHHHHH
Q 040187 218 ----QRDP----------------------LVGLKLTDWMWKAFLPEG----------------SNRDHPAANRYYEGLK 255 (299)
Q Consensus 218 ----~~~~----------------------~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~l~ 255 (299)
.... .+..+....+-..-+... .....+...++.+.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 229 (266)
T TIGR03101 150 ARRLGGESAEASNSLRERLLAGEDVEIAGYELAPALASDLDQRQLAPAVPKNCPVHWFEVRPEEGATLSPVFSRLGEQWV 229 (266)
T ss_pred HHhccccccccchhHHhhccCCCeEEEeceecCHHHHHHHHhcccCCCCCCCCceEEEEeccccCCCCCHHHHHHHHHHH
Confidence 0000 001111111111101100 0012233348999999
Q ss_pred HCCCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHH
Q 040187 256 KCGKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDF 292 (299)
Q Consensus 256 ~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~f 292 (299)
+.|++|+...++|. .|+..+..++..+.++.....
T Consensus 230 ~~g~~v~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~ 264 (266)
T TIGR03101 230 QSGVEVTVDLVPGP--AFWQTQEIEEAPELIARTTAL 264 (266)
T ss_pred HcCCeEeeeecCCc--hhhcchhhhHhHHHHHHHHhh
Confidence 99999999999997 777776666666666655543
No 28
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.68 E-value=2.1e-15 Score=142.67 Aligned_cols=224 Identities=16% Similarity=0.083 Sum_probs=152.9
Q ss_pred eEEEEEEcCCCCEEEEEEecCCC-CCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC---
Q 040187 57 TSFDVSVDATRDLWFRLYSPTNT-TATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR--- 132 (299)
Q Consensus 57 ~~~~~~~~~~~~i~~~i~~P~~~-~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~--- 132 (299)
..+++.+ ++-...+.+..|.+. +.++.|++|.+|||... ........-.+...++...|++|+.+|+|+++...
T Consensus 499 ~~~~i~~-~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~s-q~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~ 576 (755)
T KOG2100|consen 499 EFGKIEI-DGITANAILILPPNFDPSKKYPLLVVVYGGPGS-QSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDF 576 (755)
T ss_pred eeEEEEe-ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCc-ceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhH
Confidence 4445555 455677778889765 34689999999998631 11111112334455677999999999999986442
Q ss_pred --------CCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 133 --------CPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 133 --------~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
....++|...+.+++.++.. +|.+||+++|+|.||++++.+..... ..-++|.++++|+
T Consensus 577 ~~~~~~~lG~~ev~D~~~~~~~~~~~~~--------iD~~ri~i~GwSyGGy~t~~~l~~~~-----~~~fkcgvavaPV 643 (755)
T KOG2100|consen 577 RSALPRNLGDVEVKDQIEAVKKVLKLPF--------IDRSRVAIWGWSYGGYLTLKLLESDP-----GDVFKCGVAVAPV 643 (755)
T ss_pred HHHhhhhcCCcchHHHHHHHHHHHhccc--------ccHHHeEEeccChHHHHHHHHhhhCc-----CceEEEEEEecce
Confidence 22567899999999998764 89999999999999999999998732 2478999999999
Q ss_pred CCCCCCChHH-HhhcCCCCcch------------hhHHHHHHHcCCCCCCCCcHHHH--HHHHHHHHCCCcEEEEEeCCC
Q 040187 205 FGGEERTESE-MRFQRDPLVGL------------KLTDWMWKAFLPEGSNRDHPAAN--RYYEGLKKCGKDAYLIEYPNA 269 (299)
Q Consensus 205 ~~~~~~~~~~-~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~g~~~~~~~~~g~ 269 (299)
++........ .++-+.|.... ...+...-.++++..|......+ .+.++|+.+|+++++.+||+.
T Consensus 644 td~~~yds~~terymg~p~~~~~~y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde 723 (755)
T KOG2100|consen 644 TDWLYYDSTYTERYMGLPSENDKGYEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDE 723 (755)
T ss_pred eeeeeecccccHhhcCCCccccchhhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCC
Confidence 8765221111 11111111111 11111111244455555554443 899999999999999999999
Q ss_pred ceEEEecCCchHHHHHHHHHHHHHHhhhc
Q 040187 270 VHCFYLFPEVLECSLFLKEVKDFICSQAA 298 (299)
Q Consensus 270 ~H~f~~~~~~~~~~~~~~~i~~fl~~~~~ 298 (299)
.|++.... ........+..|++.++.
T Consensus 724 ~H~is~~~---~~~~~~~~~~~~~~~~~~ 749 (755)
T KOG2100|consen 724 NHGISYVE---VISHLYEKLDRFLRDCFG 749 (755)
T ss_pred Cccccccc---chHHHHHHHHHHHHHHcC
Confidence 99987653 347888899999987664
No 29
>PRK10749 lysophospholipase L2; Provisional
Probab=99.67 E-value=1.4e-14 Score=126.18 Aligned_cols=116 Identities=13% Similarity=0.112 Sum_probs=81.6
Q ss_pred CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCC-----------
Q 040187 65 ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRC----------- 133 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~----------- 133 (299)
++..+.+..+.|. .+.++||++||.+ .....|..++..++ +.||.|+++|+|+.+.+..
T Consensus 39 ~g~~l~~~~~~~~----~~~~~vll~HG~~-----~~~~~y~~~~~~l~-~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~ 108 (330)
T PRK10749 39 DDIPIRFVRFRAP----HHDRVVVICPGRI-----ESYVKYAELAYDLF-HLGYDVLIIDHRGQGRSGRLLDDPHRGHVE 108 (330)
T ss_pred CCCEEEEEEccCC----CCCcEEEEECCcc-----chHHHHHHHHHHHH-HCCCeEEEEcCCCCCCCCCCCCCCCcCccc
Confidence 4556777776654 2457899999943 22223667777776 7899999999998765431
Q ss_pred --CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 134 --PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 134 --~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
...++|+.+.++.+... .+..+++++||||||.+|+.++.+ .+..++++|+.+|...
T Consensus 109 ~~~~~~~d~~~~~~~~~~~----------~~~~~~~l~GhSmGG~ia~~~a~~------~p~~v~~lvl~~p~~~ 167 (330)
T PRK10749 109 RFNDYVDDLAAFWQQEIQP----------GPYRKRYALAHSMGGAILTLFLQR------HPGVFDAIALCAPMFG 167 (330)
T ss_pred cHHHHHHHHHHHHHHHHhc----------CCCCCeEEEEEcHHHHHHHHHHHh------CCCCcceEEEECchhc
Confidence 12234555555544332 245789999999999999999987 5567899999999764
No 30
>PRK11460 putative hydrolase; Provisional
Probab=99.65 E-value=1.3e-14 Score=119.79 Aligned_cols=174 Identities=15% Similarity=0.123 Sum_probs=107.5
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhh-CCcEEEeecCCCC----CCCC-C-------CchhHH-------HH
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVE-VPAVVISVNYRRS----PEHR-C-------PSQYED-------GI 141 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~-~g~~v~~~dyr~~----~~~~-~-------~~~~~D-------~~ 141 (299)
.+.|+||++||.| ++... +..++..++.. ..+.++.++-+.. +... + ....++ +.
T Consensus 14 ~~~~~vIlLHG~G---~~~~~--~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~ 88 (232)
T PRK11460 14 PAQQLLLLFHGVG---DNPVA--MGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFI 88 (232)
T ss_pred CCCcEEEEEeCCC---CChHH--HHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHH
Confidence 4679999999955 34332 56777777633 1345555553211 0100 1 111112 22
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChHHHhhcCCC
Q 040187 142 DALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTESEMRFQRDP 221 (299)
Q Consensus 142 ~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~ 221 (299)
+.++++.+. ++++.++|+++|+|+||.+|+.++.+ .+..+++++++++.+..... ......|
T Consensus 89 ~~i~~~~~~--------~~~~~~~i~l~GfS~Gg~~al~~a~~------~~~~~~~vv~~sg~~~~~~~----~~~~~~p 150 (232)
T PRK11460 89 ETVRYWQQQ--------SGVGASATALIGFSQGAIMALEAVKA------EPGLAGRVIAFSGRYASLPE----TAPTATT 150 (232)
T ss_pred HHHHHHHHh--------cCCChhhEEEEEECHHHHHHHHHHHh------CCCcceEEEEeccccccccc----cccCCCc
Confidence 333444333 34788999999999999999998876 44457778888876531110 0011122
Q ss_pred CcchhhHHHHHHHcCCCCCCCCcHHHH--HHHHHHHHCCCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHHhhh
Q 040187 222 LVGLKLTDWMWKAFLPEGSNRDHPAAN--RYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICSQA 297 (299)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~~~ 297 (299)
+ .++.+..|...|... ++.+.|++.|.+++++.|++++|.+. .+.++++.+||.+.+
T Consensus 151 v-----------li~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~--------~~~~~~~~~~l~~~l 209 (232)
T PRK11460 151 I-----------HLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID--------PRLMQFALDRLRYTV 209 (232)
T ss_pred E-----------EEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC--------HHHHHHHHHHHHHHc
Confidence 2 344455666555443 88899999999999999999999653 466777777777665
No 31
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.63 E-value=6.9e-15 Score=120.29 Aligned_cols=115 Identities=22% Similarity=0.307 Sum_probs=77.5
Q ss_pred CCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChHHH-hhcCCCCcchhhHHHHHHHcC
Q 040187 158 PACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTESEM-RFQRDPLVGLKLTDWMWKAFL 236 (299)
Q Consensus 158 ~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 236 (299)
+.+++++||+++|+|.||.+|+.++.+ .+..++|+|++++++.......... .....|+ .+.
T Consensus 99 ~~~i~~~ri~l~GFSQGa~~al~~~l~------~p~~~~gvv~lsG~~~~~~~~~~~~~~~~~~pi-----------~~~ 161 (216)
T PF02230_consen 99 AYGIDPSRIFLGGFSQGAAMALYLALR------YPEPLAGVVALSGYLPPESELEDRPEALAKTPI-----------LII 161 (216)
T ss_dssp HTT--GGGEEEEEETHHHHHHHHHHHC------TSSTSSEEEEES---TTGCCCHCCHCCCCTS-E-----------EEE
T ss_pred HcCCChhheehhhhhhHHHHHHHHHHH------cCcCcCEEEEeeccccccccccccccccCCCcE-----------EEE
Confidence 445899999999999999999999998 5568999999999875443222111 1111233 334
Q ss_pred CCCCCCCcHHHH--HHHHHHHHCCCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHHhhh
Q 040187 237 PEGSNRDHPAAN--RYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICSQA 297 (299)
Q Consensus 237 ~~~~~~~~~~~~--~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~~~ 297 (299)
++..|...|... +..+.|++.+.+++++.|+|++| +...+.++++.+||++++
T Consensus 162 hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH--------~i~~~~~~~~~~~l~~~~ 216 (216)
T PF02230_consen 162 HGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGH--------EISPEELRDLREFLEKHI 216 (216)
T ss_dssp EETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SS--------S--HHHHHHHHHHHHHH-
T ss_pred ecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCC--------CCCHHHHHHHHHHHhhhC
Confidence 445565555543 78889999999999999999999 456789999999999874
No 32
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.62 E-value=5.2e-14 Score=119.28 Aligned_cols=126 Identities=18% Similarity=0.211 Sum_probs=88.4
Q ss_pred EEEEc-CCCCEEEEEEecCCCCCCCccEEEEEcCCc-cccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC-----
Q 040187 60 DVSVD-ATRDLWFRLYSPTNTTATNLPVIVYFHGGG-FAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR----- 132 (299)
Q Consensus 60 ~~~~~-~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg-~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~----- 132 (299)
.+.+. ++..+...++.|.+. . .+.||++|||. +..|+. ..+..+++.|+ +.||.|+++|+|+.+.+.
T Consensus 4 ~~~~~~~~~~l~g~~~~p~~~--~-~~~vv~i~gg~~~~~g~~--~~~~~la~~l~-~~G~~v~~~Dl~G~G~S~~~~~~ 77 (274)
T TIGR03100 4 ALTFSCEGETLVGVLHIPGAS--H-TTGVLIVVGGPQYRVGSH--RQFVLLARRLA-EAGFPVLRFDYRGMGDSEGENLG 77 (274)
T ss_pred eEEEEcCCcEEEEEEEcCCCC--C-CCeEEEEeCCccccCCch--hHHHHHHHHHH-HCCCEEEEeCCCCCCCCCCCCCC
Confidence 45555 455576777888754 2 34566666653 333332 22456677886 789999999999876543
Q ss_pred CCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCC
Q 040187 133 CPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGG 207 (299)
Q Consensus 133 ~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 207 (299)
+....+|+.++++++.+... ..++|+++|||+||.+++.++.. ...++++|+++|++..
T Consensus 78 ~~~~~~d~~~~~~~l~~~~~---------g~~~i~l~G~S~Gg~~a~~~a~~-------~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 78 FEGIDADIAAAIDAFREAAP---------HLRRIVAWGLCDAASAALLYAPA-------DLRVAGLVLLNPWVRT 136 (274)
T ss_pred HHHHHHHHHHHHHHHHhhCC---------CCCcEEEEEECHHHHHHHHHhhh-------CCCccEEEEECCccCC
Confidence 22345789999999977531 24679999999999999988753 2479999999998653
No 33
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.62 E-value=4.2e-14 Score=120.64 Aligned_cols=123 Identities=23% Similarity=0.286 Sum_probs=87.3
Q ss_pred CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC-----CCchhHH
Q 040187 65 ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR-----CPSQYED 139 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~-----~~~~~~D 139 (299)
++..+.++.+.+... +..+||++||.+ .....|..++..++ +.||.|+..|.|+.+.+. .....+|
T Consensus 18 d~~~~~~~~~~~~~~---~~g~Vvl~HG~~-----Eh~~ry~~la~~l~-~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~ 88 (298)
T COG2267 18 DGTRLRYRTWAAPEP---PKGVVVLVHGLG-----EHSGRYEELADDLA-ARGFDVYALDLRGHGRSPRGQRGHVDSFAD 88 (298)
T ss_pred CCceEEEEeecCCCC---CCcEEEEecCch-----HHHHHHHHHHHHHH-hCCCEEEEecCCCCCCCCCCCcCCchhHHH
Confidence 566677777766543 338999999954 33344778888887 889999999999876553 1122344
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCC
Q 040187 140 GIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 140 ~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 208 (299)
..+.++.+.+... . .....+++++||||||.+|+..+.+ .+..++++|+.+|++...
T Consensus 89 ~~~dl~~~~~~~~-----~-~~~~~p~~l~gHSmGg~Ia~~~~~~------~~~~i~~~vLssP~~~l~ 145 (298)
T COG2267 89 YVDDLDAFVETIA-----E-PDPGLPVFLLGHSMGGLIALLYLAR------YPPRIDGLVLSSPALGLG 145 (298)
T ss_pred HHHHHHHHHHHHh-----c-cCCCCCeEEEEeCcHHHHHHHHHHh------CCccccEEEEECccccCC
Confidence 4444444444331 0 0135789999999999999999998 456899999999988765
No 34
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.61 E-value=2.7e-14 Score=126.89 Aligned_cols=215 Identities=20% Similarity=0.163 Sum_probs=142.7
Q ss_pred cCCCCEEEEEEecCCC-CCCCccEEEEEcCCccccccCCC--chhHHHHHHHHhhCCcEEEeecCCCCCCCC--C-----
Q 040187 64 DATRDLWFRLYSPTNT-TATNLPVIVYFHGGGFAILAANS--KVYDDACRRLAVEVPAVVISVNYRRSPEHR--C----- 133 (299)
Q Consensus 64 ~~~~~i~~~i~~P~~~-~~~~~p~vv~~HGGg~~~g~~~~--~~~~~~~~~la~~~g~~v~~~dyr~~~~~~--~----- 133 (299)
+.+..+..-+|+|.+. ..++.|+++++.||.-+.--.++ ....--...|| ..||.|+.+|-|++.... |
T Consensus 621 ~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~La-slGy~Vv~IDnRGS~hRGlkFE~~ik 699 (867)
T KOG2281|consen 621 KTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLA-SLGYVVVFIDNRGSAHRGLKFESHIK 699 (867)
T ss_pred CCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhh-hcceEEEEEcCCCccccchhhHHHHh
Confidence 4667788889999976 34679999999999755322221 11112245676 789999999999875322 1
Q ss_pred ----CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCC
Q 040187 134 ----PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEE 209 (299)
Q Consensus 134 ----~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 209 (299)
...++|...+++||.+... -+|.+||+|-|||.||+|++....+ .+.-++++|+-+|+.++..
T Consensus 700 ~kmGqVE~eDQVeglq~Laeq~g-------fidmdrV~vhGWSYGGYLSlm~L~~------~P~IfrvAIAGapVT~W~~ 766 (867)
T KOG2281|consen 700 KKMGQVEVEDQVEGLQMLAEQTG-------FIDMDRVGVHGWSYGGYLSLMGLAQ------YPNIFRVAIAGAPVTDWRL 766 (867)
T ss_pred hccCeeeehhhHHHHHHHHHhcC-------cccchheeEeccccccHHHHHHhhc------CcceeeEEeccCcceeeee
Confidence 2457999999999998762 2799999999999999999999887 6667899999999876542
Q ss_pred CC----hHHHhhcC--CCCcchhhHHHHHH--------H-cCCCCCCCCcHHHH--HHHHHHHHCCCcEEEEEeCCCceE
Q 040187 210 RT----ESEMRFQR--DPLVGLKLTDWMWK--------A-FLPEGSNRDHPAAN--RYYEGLKKCGKDAYLIEYPNAVHC 272 (299)
Q Consensus 210 ~~----~~~~~~~~--~~~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~--~~~~~l~~~g~~~~~~~~~g~~H~ 272 (299)
-. +.++.... .............. . ++++-.|.++-.+. .+..+|.++|++.++++||+..|.
T Consensus 767 YDTgYTERYMg~P~~nE~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~IfP~ERHs 846 (867)
T KOG2281|consen 767 YDTGYTERYMGYPDNNEHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQIFPNERHS 846 (867)
T ss_pred ecccchhhhcCCCccchhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEEEccccccc
Confidence 11 11111110 00000000000000 1 12222233332222 889999999999999999999997
Q ss_pred EEecCCchHHHHHHHHHHHHHHh
Q 040187 273 FYLFPEVLECSLFLKEVKDFICS 295 (299)
Q Consensus 273 f~~~~~~~~~~~~~~~i~~fl~~ 295 (299)
.-.. +....+-..+..|+++
T Consensus 847 iR~~---es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 847 IRNP---ESGIYYEARLLHFLQE 866 (867)
T ss_pred cCCC---ccchhHHHHHHHHHhh
Confidence 6543 3456667778899886
No 35
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.60 E-value=9.8e-15 Score=113.60 Aligned_cols=217 Identities=17% Similarity=0.246 Sum_probs=143.9
Q ss_pred CCCceEEEEEEcCCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC
Q 040187 53 KNGVTSFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR 132 (299)
Q Consensus 53 ~~~~~~~~~~~~~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~ 132 (299)
..++.++.+++...+.+.++-|.-.++ ...|+++||||..-.+|. .-..++-+....++.|+.++||+.+.+.
T Consensus 49 ~~n~pye~i~l~T~D~vtL~a~~~~~E--~S~pTlLyfh~NAGNmGh-----r~~i~~~fy~~l~mnv~ivsYRGYG~S~ 121 (300)
T KOG4391|consen 49 EFNMPYERIELRTRDKVTLDAYLMLSE--SSRPTLLYFHANAGNMGH-----RLPIARVFYVNLKMNVLIVSYRGYGKSE 121 (300)
T ss_pred ccCCCceEEEEEcCcceeEeeeeeccc--CCCceEEEEccCCCcccc-----hhhHHHHHHHHcCceEEEEEeeccccCC
Confidence 457788888888777788877765544 578999999995433332 2345566667889999999999865443
Q ss_pred C---C-chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCC
Q 040187 133 C---P-SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 133 ~---~-~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 208 (299)
. . ....|..++++|+..+.. .|..+|+++|.|.||..|..+|.+ ...++.|+|+...++...
T Consensus 122 GspsE~GL~lDs~avldyl~t~~~--------~dktkivlfGrSlGGAvai~lask------~~~ri~~~ivENTF~SIp 187 (300)
T KOG4391|consen 122 GSPSEEGLKLDSEAVLDYLMTRPD--------LDKTKIVLFGRSLGGAVAIHLASK------NSDRISAIIVENTFLSIP 187 (300)
T ss_pred CCccccceeccHHHHHHHHhcCcc--------CCcceEEEEecccCCeeEEEeecc------chhheeeeeeechhccch
Confidence 2 2 334799999999998875 688999999999999999999987 334799999988877652
Q ss_pred CC-ChHHHhhc---------CCCCcchhhHH--HHHHHcCCCCCCCCcHHHHHHHHHH-HHCC-CcEEEEEeCCCceEEE
Q 040187 209 ER-TESEMRFQ---------RDPLVGLKLTD--WMWKAFLPEGSNRDHPAANRYYEGL-KKCG-KDAYLIEYPNAVHCFY 274 (299)
Q Consensus 209 ~~-~~~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l-~~~g-~~~~~~~~~g~~H~f~ 274 (299)
.. .+....+. ...+.+..... ...-.++.+..|...|... -++| ...+ ...++.+||++.|...
T Consensus 188 ~~~i~~v~p~~~k~i~~lc~kn~~~S~~ki~~~~~P~LFiSGlkDelVPP~~--Mr~Ly~~c~S~~Krl~eFP~gtHNDT 265 (300)
T KOG4391|consen 188 HMAIPLVFPFPMKYIPLLCYKNKWLSYRKIGQCRMPFLFISGLKDELVPPVM--MRQLYELCPSRTKRLAEFPDGTHNDT 265 (300)
T ss_pred hhhhheeccchhhHHHHHHHHhhhcchhhhccccCceEEeecCccccCCcHH--HHHHHHhCchhhhhheeCCCCccCce
Confidence 21 11110000 00010000000 0011244455666666643 2333 2223 3567999999999876
Q ss_pred ecCCchHHHHHHHHHHHHHHhhh
Q 040187 275 LFPEVLECSLFLKEVKDFICSQA 297 (299)
Q Consensus 275 ~~~~~~~~~~~~~~i~~fl~~~~ 297 (299)
.. .+-+++.+.+||.+.-
T Consensus 266 ~i-----~dGYfq~i~dFlaE~~ 283 (300)
T KOG4391|consen 266 WI-----CDGYFQAIEDFLAEVV 283 (300)
T ss_pred EE-----eccHHHHHHHHHHHhc
Confidence 64 3568888999998753
No 36
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.58 E-value=6e-14 Score=107.15 Aligned_cols=145 Identities=22% Similarity=0.313 Sum_probs=96.6
Q ss_pred EEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCc
Q 040187 86 VIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQ 165 (299)
Q Consensus 86 ~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~ 165 (299)
+||++||++. + ...+..+++.++ +.||.|+.+||++.... ....+..++++++.... .++++
T Consensus 1 ~vv~~HG~~~---~--~~~~~~~~~~l~-~~G~~v~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~~~ 62 (145)
T PF12695_consen 1 VVVLLHGWGG---S--RRDYQPLAEALA-EQGYAVVAFDYPGHGDS---DGADAVERVLADIRAGY---------PDPDR 62 (145)
T ss_dssp EEEEECTTTT---T--THHHHHHHHHHH-HTTEEEEEESCTTSTTS---HHSHHHHHHHHHHHHHH---------CTCCE
T ss_pred CEEEECCCCC---C--HHHHHHHHHHHH-HCCCEEEEEecCCCCcc---chhHHHHHHHHHHHhhc---------CCCCc
Confidence 5899999763 3 334678888888 66999999999987655 33446666666664433 27899
Q ss_pred EEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChHHHhhcCCCCcchhhHHHHHHHcCCCCCCCCcH
Q 040187 166 CFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTESEMRFQRDPLVGLKLTDWMWKAFLPEGSNRDHP 245 (299)
Q Consensus 166 i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (299)
|+++|||+||.+++.++.+ . .+++++|+++|+.+ . ........|+ .++.+..|...+
T Consensus 63 i~l~G~S~Gg~~a~~~~~~------~-~~v~~~v~~~~~~~----~-~~~~~~~~pv-----------~~i~g~~D~~~~ 119 (145)
T PF12695_consen 63 IILIGHSMGGAIAANLAAR------N-PRVKAVVLLSPYPD----S-EDLAKIRIPV-----------LFIHGENDPLVP 119 (145)
T ss_dssp EEEEEETHHHHHHHHHHHH------S-TTESEEEEESESSG----C-HHHTTTTSEE-----------EEEEETT-SSSH
T ss_pred EEEEEEccCcHHHHHHhhh------c-cceeEEEEecCccc----h-hhhhccCCcE-----------EEEEECCCCcCC
Confidence 9999999999999999986 4 58999999999422 1 1111112222 233344455554
Q ss_pred HHHHHHHHHHHCCCcEEEEEeCCCceE
Q 040187 246 AANRYYEGLKKCGKDAYLIEYPNAVHC 272 (299)
Q Consensus 246 ~~~~~~~~l~~~g~~~~~~~~~g~~H~ 272 (299)
... ..+..++...+.++++++|++|+
T Consensus 120 ~~~-~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 120 PEQ-VRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HHH-HHHHHHHHCSSEEEEEETTS-TT
T ss_pred HHH-HHHHHHHcCCCcEEEEeCCCcCc
Confidence 432 22223333478999999999993
No 37
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.57 E-value=1.8e-13 Score=117.55 Aligned_cols=210 Identities=25% Similarity=0.332 Sum_probs=123.9
Q ss_pred CCCceEEEEEEc--CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCC
Q 040187 53 KNGVTSFDVSVD--ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPE 130 (299)
Q Consensus 53 ~~~~~~~~~~~~--~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~ 130 (299)
.+++++.++++. ++..+...++.|+... ++.|+||.+||.|.. ... ... ...++ ..|+.|+.+|-|+.+.
T Consensus 51 ~~~~~vy~v~f~s~~g~~V~g~l~~P~~~~-~~~Pavv~~hGyg~~---~~~--~~~-~~~~a-~~G~~vl~~d~rGqg~ 122 (320)
T PF05448_consen 51 TPGVEVYDVSFESFDGSRVYGWLYRPKNAK-GKLPAVVQFHGYGGR---SGD--PFD-LLPWA-AAGYAVLAMDVRGQGG 122 (320)
T ss_dssp BSSEEEEEEEEEEGGGEEEEEEEEEES-SS-SSEEEEEEE--TT-----GGG--HHH-HHHHH-HTT-EEEEE--TTTSS
T ss_pred CCCEEEEEEEEEccCCCEEEEEEEecCCCC-CCcCEEEEecCCCCC---CCC--ccc-ccccc-cCCeEEEEecCCCCCC
Confidence 347888999997 5667888889999443 789999999996632 111 222 23455 7899999999996441
Q ss_pred C----------C--------C---C------chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHH
Q 040187 131 H----------R--------C---P------SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAV 183 (299)
Q Consensus 131 ~----------~--------~---~------~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~ 183 (299)
. . . + ..+.|+..|+++|....+ +|.+||++.|.|.||.+|+.+|.
T Consensus 123 ~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpe--------vD~~rI~v~G~SqGG~lal~~aa 194 (320)
T PF05448_consen 123 RSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPE--------VDGKRIGVTGGSQGGGLALAAAA 194 (320)
T ss_dssp SS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTT--------EEEEEEEEEEETHHHHHHHHHHH
T ss_pred CCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCC--------cCcceEEEEeecCchHHHHHHHH
Confidence 0 0 0 0 235899999999999875 89999999999999999999998
Q ss_pred HhccCCCCCCccceEEEecccCCCCCCC----------hHHHhhcC--CCCcchhhHHHHHHH-----------------
Q 040187 184 LADGCNFSRLRLNGLIAIQPFFGGEERT----------ESEMRFQR--DPLVGLKLTDWMWKA----------------- 234 (299)
Q Consensus 184 ~~~~~~~~~~~~~~~i~~~p~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~~----------------- 234 (299)
. . .+|++++...|++...... .....+.. .+. ....+.+...
T Consensus 195 L------d-~rv~~~~~~vP~l~d~~~~~~~~~~~~~y~~~~~~~~~~d~~--~~~~~~v~~~L~Y~D~~nfA~ri~~pv 265 (320)
T PF05448_consen 195 L------D-PRVKAAAADVPFLCDFRRALELRADEGPYPEIRRYFRWRDPH--HEREPEVFETLSYFDAVNFARRIKCPV 265 (320)
T ss_dssp H------S-ST-SEEEEESESSSSHHHHHHHT--STTTHHHHHHHHHHSCT--HCHHHHHHHHHHTT-HHHHGGG--SEE
T ss_pred h------C-ccccEEEecCCCccchhhhhhcCCccccHHHHHHHHhccCCC--cccHHHHHHHHhhhhHHHHHHHcCCCE
Confidence 6 3 3699999999987532100 00000000 000 0011111111
Q ss_pred -cCCCCCCCCcHHHHHHHHHHHHCCCcEEEEEeCCCceEEEecCCchHHHHH-HHHHHHHHHhh
Q 040187 235 -FLPEGSNRDHPAANRYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLECSLF-LKEVKDFICSQ 296 (299)
Q Consensus 235 -~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~-~~~i~~fl~~~ 296 (299)
+..+-.|...|....| ........+.++.+||..+| +...+. .++..+||++|
T Consensus 266 l~~~gl~D~~cPP~t~f-A~yN~i~~~K~l~vyp~~~H--------e~~~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 266 LFSVGLQDPVCPPSTQF-AAYNAIPGPKELVVYPEYGH--------EYGPEFQEDKQLNFLKEH 320 (320)
T ss_dssp EEEEETT-SSS-HHHHH-HHHCC--SSEEEEEETT--S--------STTHHHHHHHHHHHHHH-
T ss_pred EEEEecCCCCCCchhHH-HHHhccCCCeeEEeccCcCC--------CchhhHHHHHHHHHHhcC
Confidence 1111234444544322 23333356789999999999 344455 78899999876
No 38
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.57 E-value=4.4e-14 Score=113.72 Aligned_cols=207 Identities=16% Similarity=0.194 Sum_probs=129.2
Q ss_pred CceEEEEEEcCCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCC-
Q 040187 55 GVTSFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRC- 133 (299)
Q Consensus 55 ~~~~~~~~~~~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~- 133 (299)
.+....+.-..+..+...-+.|... ..++++|.||-....| ....+...+....++.+++.||++.+....
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~~~---~~~~lly~hGNa~Dlg-----q~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~ 105 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPPEA---AHPTLLYSHGNAADLG-----QMVELFKELSIFLNCNVVSYDYSGYGRSSGK 105 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCccc---cceEEEEcCCcccchH-----HHHHHHHHHhhcccceEEEEecccccccCCC
Confidence 3444444444444454444556543 5699999999533222 234456667667899999999998654432
Q ss_pred ---CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCC
Q 040187 134 ---PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEER 210 (299)
Q Consensus 134 ---~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~ 210 (299)
-..++|+.++++||++.. | ..++|+|+|+|+|...++.+|.+ .+ ++|+|+.+|++.+-..
T Consensus 106 psE~n~y~Di~avye~Lr~~~--------g-~~~~Iil~G~SiGt~~tv~Lasr------~~--~~alVL~SPf~S~~rv 168 (258)
T KOG1552|consen 106 PSERNLYADIKAVYEWLRNRY--------G-SPERIILYGQSIGTVPTVDLASR------YP--LAAVVLHSPFTSGMRV 168 (258)
T ss_pred cccccchhhHHHHHHHHHhhc--------C-CCceEEEEEecCCchhhhhHhhc------CC--cceEEEeccchhhhhh
Confidence 257799999999999865 3 68999999999999999999886 33 8999999999865432
Q ss_pred ChHH----HhhcCCCCcchhhHHH--HHHHcCCCCCCCCcHHHH--HHHHHHHHCCCcEEEEEeCCCceEEEecCCchHH
Q 040187 211 TESE----MRFQRDPLVGLKLTDW--MWKAFLPEGSNRDHPAAN--RYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLEC 282 (299)
Q Consensus 211 ~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~ 282 (299)
.-.. ......+. .+.... ....++++..|...+... ++.++.++ +++.....|++|..... .
T Consensus 169 ~~~~~~~~~~~d~f~~--i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~---~~epl~v~g~gH~~~~~-----~ 238 (258)
T KOG1552|consen 169 AFPDTKTTYCFDAFPN--IEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKE---KVEPLWVKGAGHNDIEL-----Y 238 (258)
T ss_pred hccCcceEEeeccccc--cCcceeccCCEEEEecccCceecccccHHHHHhccc---cCCCcEEecCCCccccc-----C
Confidence 2110 00000111 011100 011233334444444433 45555443 46788888999976543 4
Q ss_pred HHHHHHHHHHHHhh
Q 040187 283 SLFLKEVKDFICSQ 296 (299)
Q Consensus 283 ~~~~~~i~~fl~~~ 296 (299)
.+++..+..|+...
T Consensus 239 ~~yi~~l~~f~~~~ 252 (258)
T KOG1552|consen 239 PEYIEHLRRFISSV 252 (258)
T ss_pred HHHHHHHHHHHHHh
Confidence 57777888777654
No 39
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.57 E-value=2.9e-14 Score=116.31 Aligned_cols=117 Identities=17% Similarity=0.184 Sum_probs=84.4
Q ss_pred EEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCC-------------CCCchhH
Q 040187 72 RLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEH-------------RCPSQYE 138 (299)
Q Consensus 72 ~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~-------------~~~~~~~ 138 (299)
.+|.|++.+ ++.|+||++||++....+ .........++.+.|+.|++||+++.... .......
T Consensus 2 ~ly~P~~~~-~~~P~vv~lHG~~~~~~~---~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~ 77 (212)
T TIGR01840 2 YVYVPAGLT-GPRALVLALHGCGQTASA---YVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVE 77 (212)
T ss_pred EEEcCCCCC-CCCCEEEEeCCCCCCHHH---HhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHH
Confidence 578898753 578999999998743211 10011145566678999999999974311 1113456
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 139 DGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 139 D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
|+.+.++++.++. ++|++||+|+|+|+||.+|+.++.+ .+..+++++.+++...
T Consensus 78 ~~~~~i~~~~~~~--------~id~~~i~l~G~S~Gg~~a~~~a~~------~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 78 SLHQLIDAVKANY--------SIDPNRVYVTGLSAGGGMTAVLGCT------YPDVFAGGASNAGLPY 131 (212)
T ss_pred HHHHHHHHHHHhc--------CcChhheEEEEECHHHHHHHHHHHh------CchhheEEEeecCCcc
Confidence 7778888887654 4799999999999999999999987 5567899999887653
No 40
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.56 E-value=5.4e-14 Score=115.02 Aligned_cols=130 Identities=18% Similarity=0.289 Sum_probs=97.1
Q ss_pred CEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHHH
Q 040187 68 DLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFI 147 (299)
Q Consensus 68 ~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l 147 (299)
..++.+|.|... +..|++||+||-+ .....|..+++++| ..||+|+.+|+.......-...+++..+.++|+
T Consensus 3 p~~l~v~~P~~~--g~yPVv~f~~G~~-----~~~s~Ys~ll~hvA-ShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl 74 (259)
T PF12740_consen 3 PKPLLVYYPSSA--GTYPVVLFLHGFL-----LINSWYSQLLEHVA-SHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWL 74 (259)
T ss_pred CCCeEEEecCCC--CCcCEEEEeCCcC-----CCHHHHHHHHHHHH-hCceEEEEecccccCCCCcchhHHHHHHHHHHH
Confidence 356789999976 7899999999943 22334899999998 889999999955332233346778999999999
Q ss_pred HhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 148 DSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 148 ~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
.+.....-.....+|.++++|+|||.||-+|..+++...+.. ...++++++++.|+-.
T Consensus 75 ~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~-~~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 75 AKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSS-LDLRFSALILLDPVDG 132 (259)
T ss_pred HhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccc-cccceeEEEEeccccc
Confidence 886542111123468999999999999999999988753211 1357999999999853
No 41
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.54 E-value=7.1e-13 Score=103.93 Aligned_cols=183 Identities=16% Similarity=0.090 Sum_probs=118.4
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCC-------CCCchhHHHHHHHHHHHhhcCCC
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEH-------RCPSQYEDGIDALKFIDSSFIDI 154 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~-------~~~~~~~D~~~a~~~l~~~~~~~ 154 (299)
++ .+|+++|| ..|+... .+.+.+.|. +.||.|.+|.|++.+-. +...+.+|+.+++++|.+...
T Consensus 14 G~-~AVLllHG---FTGt~~D--vr~Lgr~L~-e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy-- 84 (243)
T COG1647 14 GN-RAVLLLHG---FTGTPRD--VRMLGRYLN-ENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGY-- 84 (243)
T ss_pred CC-EEEEEEec---cCCCcHH--HHHHHHHHH-HCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCC--
Confidence 44 78999999 2355443 566677775 88999999999986532 334678999999999987653
Q ss_pred CCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChH---HH----hhcCCCCcchhh
Q 040187 155 QNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTES---EM----RFQRDPLVGLKL 227 (299)
Q Consensus 155 ~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~---~~----~~~~~~~~~~~~ 227 (299)
+.|+++|.||||-+|+.+|.+. .++++|.+++.+........ .. .....+-...+.
T Consensus 85 ---------~eI~v~GlSmGGv~alkla~~~--------p~K~iv~m~a~~~~k~~~~iie~~l~y~~~~kk~e~k~~e~ 147 (243)
T COG1647 85 ---------DEIAVVGLSMGGVFALKLAYHY--------PPKKIVPMCAPVNVKSWRIIIEGLLEYFRNAKKYEGKDQEQ 147 (243)
T ss_pred ---------CeEEEEeecchhHHHHHHHhhC--------CccceeeecCCcccccchhhhHHHHHHHHHhhhccCCCHHH
Confidence 7899999999999999999873 38899988876653322110 00 011111111111
Q ss_pred HHHHHHH-------------------------------cCCCCCCCCcHHHH--HHHHHHHHCCCcEEEEEeCCCceEEE
Q 040187 228 TDWMWKA-------------------------------FLPEGSNRDHPAAN--RYYEGLKKCGKDAYLIEYPNAVHCFY 274 (299)
Q Consensus 228 ~~~~~~~-------------------------------~~~~~~~~~~~~~~--~~~~~l~~~g~~~~~~~~~g~~H~f~ 274 (299)
.+...+. .+....|...|... .+++... ..+.++..|++.+|...
T Consensus 148 ~~~e~~~~~~~~~~~~~~~~~~i~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~--s~~KeL~~~e~SgHVIt 225 (243)
T COG1647 148 IDKEMKSYKDTPMTTTAQLKKLIKDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVE--SDDKELKWLEGSGHVIT 225 (243)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhcc--CCcceeEEEccCCceee
Confidence 1111111 11122333333322 2222222 35789999999999877
Q ss_pred ecCCchHHHHHHHHHHHHHHh
Q 040187 275 LFPEVLECSLFLKEVKDFICS 295 (299)
Q Consensus 275 ~~~~~~~~~~~~~~i~~fl~~ 295 (299)
.. ++.++..+.+..||+.
T Consensus 226 ~D---~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 226 LD---KERDQVEEDVITFLEK 243 (243)
T ss_pred cc---hhHHHHHHHHHHHhhC
Confidence 65 6899999999999973
No 42
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.53 E-value=3.5e-12 Score=109.33 Aligned_cols=99 Identities=20% Similarity=0.191 Sum_probs=73.0
Q ss_pred ccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC----------chhHHHHHHHHHHHhhcCC
Q 040187 84 LPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP----------SQYEDGIDALKFIDSSFID 153 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~----------~~~~D~~~a~~~l~~~~~~ 153 (299)
.|.||++||.+ ++ ...+..++..|+ + .+.|+++|.++.+.+..+ ..++|..+.+.-+.+..
T Consensus 29 ~~~vlllHG~~---~~--~~~w~~~~~~L~-~-~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-- 99 (294)
T PLN02824 29 GPALVLVHGFG---GN--ADHWRKNTPVLA-K-SHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-- 99 (294)
T ss_pred CCeEEEECCCC---CC--hhHHHHHHHHHH-h-CCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHh--
Confidence 37899999954 23 234677788886 4 369999999988765433 23455555555555443
Q ss_pred CCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 154 IQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 154 ~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
..+++.++|||+||.+|+.+|.+ .+.+++++|+++|..
T Consensus 100 --------~~~~~~lvGhS~Gg~va~~~a~~------~p~~v~~lili~~~~ 137 (294)
T PLN02824 100 --------VGDPAFVICNSVGGVVGLQAAVD------APELVRGVMLINISL 137 (294)
T ss_pred --------cCCCeEEEEeCHHHHHHHHHHHh------ChhheeEEEEECCCc
Confidence 34789999999999999999998 666899999998754
No 43
>COG0400 Predicted esterase [General function prediction only]
Probab=99.51 E-value=2.7e-13 Score=108.43 Aligned_cols=176 Identities=15% Similarity=0.093 Sum_probs=113.9
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCC-----------CCCCCC--chhHHHHHHHHHHH
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRS-----------PEHRCP--SQYEDGIDALKFID 148 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~-----------~~~~~~--~~~~D~~~a~~~l~ 148 (299)
...|+||++||-| |+..+ +-++...+. -++.++++.=+.. .+..+. ....+.....+++.
T Consensus 16 p~~~~iilLHG~G---gde~~--~~~~~~~~~--P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~ 88 (207)
T COG0400 16 PAAPLLILLHGLG---GDELD--LVPLPELIL--PNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLE 88 (207)
T ss_pred CCCcEEEEEecCC---CChhh--hhhhhhhcC--CCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHH
Confidence 4678999999955 34322 334444443 2466666553321 122222 11223333444554
Q ss_pred hhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChHHHhhcCCCCcchhhH
Q 040187 149 SSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTESEMRFQRDPLVGLKLT 228 (299)
Q Consensus 149 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (299)
.... +++++.+|++++|+|.||++|+.+..+ .+..++++|+++|++-..... .......|+
T Consensus 89 ~~~~-----~~gi~~~~ii~~GfSqGA~ial~~~l~------~~~~~~~ail~~g~~~~~~~~--~~~~~~~pi------ 149 (207)
T COG0400 89 ELAE-----EYGIDSSRIILIGFSQGANIALSLGLT------LPGLFAGAILFSGMLPLEPEL--LPDLAGTPI------ 149 (207)
T ss_pred HHHH-----HhCCChhheEEEecChHHHHHHHHHHh------CchhhccchhcCCcCCCCCcc--ccccCCCeE------
Confidence 4443 667999999999999999999999998 556899999999987654321 112223344
Q ss_pred HHHHHHcCCCCCCCCcHH--HHHHHHHHHHCCCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHHhhh
Q 040187 229 DWMWKAFLPEGSNRDHPA--ANRYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICSQA 297 (299)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~~~ 297 (299)
.++.+..|...|. ..++.+.|++.|.+|+.+.++ ++| +...+.++.+.+|+.+.+
T Consensus 150 -----ll~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~-~GH--------~i~~e~~~~~~~wl~~~~ 206 (207)
T COG0400 150 -----LLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHE-GGH--------EIPPEELEAARSWLANTL 206 (207)
T ss_pred -----EEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEec-CCC--------cCCHHHHHHHHHHHHhcc
Confidence 2333444443333 338889999999999999999 789 446778888888998754
No 44
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.50 E-value=2.4e-12 Score=98.78 Aligned_cols=193 Identities=22% Similarity=0.237 Sum_probs=125.4
Q ss_pred EEEEc-CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCC--CC---
Q 040187 60 DVSVD-ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEH--RC--- 133 (299)
Q Consensus 60 ~~~~~-~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~--~~--- 133 (299)
++.++ ..+.+..+ |.|... .+.|+.|.+|--....|+.+.......++.+. +.|+.++.+|||+-+.+ .|
T Consensus 6 ~v~i~Gp~G~le~~-~~~~~~--~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~-~~G~atlRfNfRgVG~S~G~fD~G 81 (210)
T COG2945 6 TVIINGPAGRLEGR-YEPAKT--PAAPIALICHPHPLFGGTMNNKVVQTLARALV-KRGFATLRFNFRGVGRSQGEFDNG 81 (210)
T ss_pred cEEecCCcccceec-cCCCCC--CCCceEEecCCCccccCccCCHHHHHHHHHHH-hCCceEEeecccccccccCcccCC
Confidence 44554 33445444 344443 57899999998655556777665566666665 89999999999975433 22
Q ss_pred CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChH
Q 040187 134 PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTES 213 (299)
Q Consensus 134 ~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~ 213 (299)
-..++|+.++++|++++.. +..-..++|+|.|+++|+.+|.+.. .....|..+|.+...+. +
T Consensus 82 iGE~~Da~aaldW~~~~hp---------~s~~~~l~GfSFGa~Ia~~la~r~~-------e~~~~is~~p~~~~~df--s 143 (210)
T COG2945 82 IGELEDAAAALDWLQARHP---------DSASCWLAGFSFGAYIAMQLAMRRP-------EILVFISILPPINAYDF--S 143 (210)
T ss_pred cchHHHHHHHHHHHHhhCC---------CchhhhhcccchHHHHHHHHHHhcc-------cccceeeccCCCCchhh--h
Confidence 3678999999999999874 4455789999999999999998743 34566666776652110 0
Q ss_pred HHhhcCCCCcchhhHHHHHHHcCCCCCCCCcHHHHHHHHHHHHC-CCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHH
Q 040187 214 EMRFQRDPLVGLKLTDWMWKAFLPEGSNRDHPAANRYYEGLKKC-GKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDF 292 (299)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~f 292 (299)
...-...+. .++....|... .+.++|+-. +.+.++...++++|.|.- ......+.+.+|
T Consensus 144 ~l~P~P~~~-----------lvi~g~~Ddvv----~l~~~l~~~~~~~~~~i~i~~a~HFF~g-----Kl~~l~~~i~~~ 203 (210)
T COG2945 144 FLAPCPSPG-----------LVIQGDADDVV----DLVAVLKWQESIKITVITIPGADHFFHG-----KLIELRDTIADF 203 (210)
T ss_pred hccCCCCCc-----------eeEecChhhhh----cHHHHHHhhcCCCCceEEecCCCceecc-----cHHHHHHHHHHH
Confidence 000001111 22222233222 334555433 478899999999997764 467788888888
Q ss_pred HH
Q 040187 293 IC 294 (299)
Q Consensus 293 l~ 294 (299)
+.
T Consensus 204 l~ 205 (210)
T COG2945 204 LE 205 (210)
T ss_pred hh
Confidence 84
No 45
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.50 E-value=4.5e-12 Score=106.15 Aligned_cols=105 Identities=24% Similarity=0.252 Sum_probs=71.6
Q ss_pred EEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC------chhHHHHHH
Q 040187 70 WFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP------SQYEDGIDA 143 (299)
Q Consensus 70 ~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~------~~~~D~~~a 143 (299)
.+..+.|.+. .+.|+||++||.+ ++. ..+..++..++ .+|.|+.+|.|+.+++..+ ...+|+.+.
T Consensus 4 ~~~~~~~~~~--~~~~~iv~lhG~~---~~~--~~~~~~~~~l~--~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~ 74 (255)
T PRK10673 4 NIRAQTAQNP--HNNSPIVLVHGLF---GSL--DNLGVLARDLV--NDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDT 74 (255)
T ss_pred eeeeccCCCC--CCCCCEEEECCCC---Cch--hHHHHHHHHHh--hCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHH
Confidence 3444445443 4678999999954 233 23667777775 3799999999987655432 222333333
Q ss_pred HHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecc
Q 040187 144 LKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQP 203 (299)
Q Consensus 144 ~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p 203 (299)
++++ ..+++.++|||+||.+|+.++.+ .+.+++++|++++
T Consensus 75 l~~l--------------~~~~~~lvGhS~Gg~va~~~a~~------~~~~v~~lvli~~ 114 (255)
T PRK10673 75 LDAL--------------QIEKATFIGHSMGGKAVMALTAL------APDRIDKLVAIDI 114 (255)
T ss_pred HHHc--------------CCCceEEEEECHHHHHHHHHHHh------CHhhcceEEEEec
Confidence 3322 34679999999999999999987 5567999998753
No 46
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.50 E-value=1.3e-11 Score=106.26 Aligned_cols=125 Identities=18% Similarity=0.157 Sum_probs=84.1
Q ss_pred eEEEEEEcCCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC--
Q 040187 57 TSFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP-- 134 (299)
Q Consensus 57 ~~~~~~~~~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~-- 134 (299)
..+.++++++++..++++...... ...|+||++||.+ ++ ...+..++..|+ +.||.|+++|.|+.+.+..+
T Consensus 20 ~~~~~~~~~~~~~~~~i~y~~~G~-~~~~~lvliHG~~---~~--~~~w~~~~~~L~-~~gy~vi~~Dl~G~G~S~~~~~ 92 (302)
T PRK00870 20 APHYVDVDDGDGGPLRMHYVDEGP-ADGPPVLLLHGEP---SW--SYLYRKMIPILA-AAGHRVIAPDLIGFGRSDKPTR 92 (302)
T ss_pred CceeEeecCCCCceEEEEEEecCC-CCCCEEEEECCCC---Cc--hhhHHHHHHHHH-hCCCEEEEECCCCCCCCCCCCC
Confidence 456677775455555554333221 2357899999954 22 223677788886 66999999999987765432
Q ss_pred ---chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 135 ---SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 135 ---~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
..+++..+.+.-+.+.. +.+++.++|||+||.+|+.++.+ .+..++++|++++.
T Consensus 93 ~~~~~~~~~a~~l~~~l~~l----------~~~~v~lvGhS~Gg~ia~~~a~~------~p~~v~~lvl~~~~ 149 (302)
T PRK00870 93 REDYTYARHVEWMRSWFEQL----------DLTDVTLVCQDWGGLIGLRLAAE------HPDRFARLVVANTG 149 (302)
T ss_pred cccCCHHHHHHHHHHHHHHc----------CCCCEEEEEEChHHHHHHHHHHh------ChhheeEEEEeCCC
Confidence 12344444444444433 34679999999999999999987 55679999999864
No 47
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.47 E-value=4.4e-13 Score=108.34 Aligned_cols=121 Identities=19% Similarity=0.244 Sum_probs=84.5
Q ss_pred EEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCC--CCCCC----------Cch
Q 040187 69 LWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRS--PEHRC----------PSQ 136 (299)
Q Consensus 69 i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~--~~~~~----------~~~ 136 (299)
+.+++|.|.+.+..+.|+||.+||.+. +........-...+|.+.||+|+.|+-... +...+ ...
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~---~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d 77 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQ---SAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGD 77 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCC---CHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccc
Confidence 468999999765457899999999653 222111112356789999999999884321 11111 112
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 137 YEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 137 ~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
...+.+.++++.++ +++|++||++.|+|+||.++..++.. .++.++++..+++...
T Consensus 78 ~~~i~~lv~~v~~~--------~~iD~~RVyv~G~S~Gg~ma~~la~~------~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 78 VAFIAALVDYVAAR--------YNIDPSRVYVTGLSNGGMMANVLACA------YPDLFAAVAVVSGVPY 133 (220)
T ss_pred hhhHHHHHHhHhhh--------cccCCCceeeEEECHHHHHHHHHHHh------CCccceEEEeeccccc
Confidence 23444556666554 45999999999999999999999988 6678999998888654
No 48
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.45 E-value=7.6e-12 Score=104.36 Aligned_cols=101 Identities=18% Similarity=0.222 Sum_probs=69.4
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC----chhHHHHHHHHHHHhhcCCCCCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP----SQYEDGIDALKFIDSSFIDIQNFP 158 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~----~~~~D~~~a~~~l~~~~~~~~~~~ 158 (299)
+.|+||++||.+ ++. ..+...+..+. .++.|+++|+|+.+.+..+ ..++|..+.+..+.+..
T Consensus 12 ~~~~iv~lhG~~---~~~--~~~~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~------- 77 (257)
T TIGR03611 12 DAPVVVLSSGLG---GSG--SYWAPQLDVLT--QRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDAL------- 77 (257)
T ss_pred CCCEEEEEcCCC---cch--hHHHHHHHHHH--hccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHh-------
Confidence 568999999954 232 23455555553 4799999999987654322 23344434343333332
Q ss_pred CCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 159 ACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 159 ~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
+..+++++|||+||.+|+.++.+ .+..++++|+++++..
T Consensus 78 ---~~~~~~l~G~S~Gg~~a~~~a~~------~~~~v~~~i~~~~~~~ 116 (257)
T TIGR03611 78 ---NIERFHFVGHALGGLIGLQLALR------YPERLLSLVLINAWSR 116 (257)
T ss_pred ---CCCcEEEEEechhHHHHHHHHHH------ChHHhHHheeecCCCC
Confidence 45789999999999999999987 4457899999887654
No 49
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.44 E-value=9.7e-12 Score=102.80 Aligned_cols=99 Identities=23% Similarity=0.332 Sum_probs=70.2
Q ss_pred cEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCc-----hhHHHHHH-HHHHHhhcCCCCCCC
Q 040187 85 PVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPS-----QYEDGIDA-LKFIDSSFIDIQNFP 158 (299)
Q Consensus 85 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~-----~~~D~~~a-~~~l~~~~~~~~~~~ 158 (299)
|+||++||.+ ++. ..+..++..|+ .|+.|+.+|+|+.+....+. .+++.... +..+.+..
T Consensus 2 ~~vv~~hG~~---~~~--~~~~~~~~~L~--~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~------- 67 (251)
T TIGR03695 2 PVLVFLHGFL---GSG--ADWQALIELLG--PHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQL------- 67 (251)
T ss_pred CEEEEEcCCC---Cch--hhHHHHHHHhc--ccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHc-------
Confidence 7899999954 232 23677778775 59999999999876654332 23333333 44444432
Q ss_pred CCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 159 ACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 159 ~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
+.++++++|||+||.+|+.++.+ .+..+++++++++...
T Consensus 68 ---~~~~~~l~G~S~Gg~ia~~~a~~------~~~~v~~lil~~~~~~ 106 (251)
T TIGR03695 68 ---GIEPFFLVGYSMGGRIALYYALQ------YPERVQGLILESGSPG 106 (251)
T ss_pred ---CCCeEEEEEeccHHHHHHHHHHh------CchheeeeEEecCCCC
Confidence 45789999999999999999987 4457899999887543
No 50
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=99.43 E-value=2.6e-13 Score=117.53 Aligned_cols=105 Identities=29% Similarity=0.434 Sum_probs=88.4
Q ss_pred CCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCC----------CCCCCCc
Q 040187 66 TRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRS----------PEHRCPS 135 (299)
Q Consensus 66 ~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~----------~~~~~~~ 135 (299)
.+++.+.+|.|... ..+..|+|||.||||..|+.+...|+. +-|+...+.+|++++||.+ |+.+...
T Consensus 118 EDCLYlNVW~P~~~-p~n~tVlVWiyGGGF~sGt~SLdvYdG--k~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNm 194 (601)
T KOG4389|consen 118 EDCLYLNVWAPAAD-PYNLTVLVWIYGGGFYSGTPSLDVYDG--KFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNM 194 (601)
T ss_pred hhceEEEEeccCCC-CCCceEEEEEEcCccccCCcceeeecc--ceeeeeccEEEEEeeeeeccceEEecCCCCCCCCcc
Confidence 56899999999532 256679999999999999988877764 5566677899999999953 5677778
Q ss_pred hhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHH
Q 040187 136 QYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLA 178 (299)
Q Consensus 136 ~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA 178 (299)
.+-|..-|++|+++|.. .+|.|+++|.|+|.|||+...
T Consensus 195 Gl~DQqLAl~WV~~Ni~-----aFGGnp~~vTLFGESAGaASv 232 (601)
T KOG4389|consen 195 GLLDQQLALQWVQENIA-----AFGGNPSRVTLFGESAGAASV 232 (601)
T ss_pred chHHHHHHHHHHHHhHH-----HhCCCcceEEEeccccchhhh
Confidence 89999999999999986 889999999999999998633
No 51
>PRK10985 putative hydrolase; Provisional
Probab=99.43 E-value=6.5e-12 Score=109.11 Aligned_cols=131 Identities=15% Similarity=0.122 Sum_probs=88.2
Q ss_pred EEEEEEcCCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCC----
Q 040187 58 SFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRC---- 133 (299)
Q Consensus 58 ~~~~~~~~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~---- 133 (299)
.+.++.++++.+.+++.. ......+.|+||++||.+ |+........++..++ +.||.|+++|||+.+..+.
T Consensus 33 ~~~~~~~dg~~~~l~w~~-~~~~~~~~p~vll~HG~~---g~~~~~~~~~~~~~l~-~~G~~v~~~d~rG~g~~~~~~~~ 107 (324)
T PRK10985 33 WQRLELPDGDFVDLAWSE-DPAQARHKPRLVLFHGLE---GSFNSPYAHGLLEAAQ-KRGWLGVVMHFRGCSGEPNRLHR 107 (324)
T ss_pred eeEEECCCCCEEEEecCC-CCccCCCCCEEEEeCCCC---CCCcCHHHHHHHHHHH-HCCCEEEEEeCCCCCCCccCCcc
Confidence 345666677666565432 211124579999999943 2322222345667776 7899999999998654321
Q ss_pred ---CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCC
Q 040187 134 ---PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGG 207 (299)
Q Consensus 134 ---~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 207 (299)
....+|+..+++++.+.. ...+++++|||+||.+++.++.+..+ ...+.++|++++.++.
T Consensus 108 ~~~~~~~~D~~~~i~~l~~~~----------~~~~~~~vG~S~GG~i~~~~~~~~~~----~~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 108 IYHSGETEDARFFLRWLQREF----------GHVPTAAVGYSLGGNMLACLLAKEGD----DLPLDAAVIVSAPLML 170 (324)
T ss_pred eECCCchHHHHHHHHHHHHhC----------CCCCEEEEEecchHHHHHHHHHhhCC----CCCccEEEEEcCCCCH
Confidence 134689999999998754 34679999999999988877765321 1247888888887653
No 52
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.43 E-value=3.3e-11 Score=102.47 Aligned_cols=101 Identities=24% Similarity=0.251 Sum_probs=65.6
Q ss_pred CccEEEEEcCCccccccCCCc-hhHHHHHHHHhhCCcEEEeecCCCCCCCCCCc-----hhHHHHHHHHHHHhhcCCCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSK-VYDDACRRLAVEVPAVVISVNYRRSPEHRCPS-----QYEDGIDALKFIDSSFIDIQN 156 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~-~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~-----~~~D~~~a~~~l~~~~~~~~~ 156 (299)
+.|.||++||.|. +...+ .+...+..++ +.||.|+++|+|+.+.+..+. ....+.+ +..+.+.
T Consensus 29 ~~~~ivllHG~~~---~~~~~~~~~~~~~~l~-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~-l~~~l~~------ 97 (282)
T TIGR03343 29 NGEAVIMLHGGGP---GAGGWSNYYRNIGPFV-DAGYRVILKDSPGFNKSDAVVMDEQRGLVNARA-VKGLMDA------ 97 (282)
T ss_pred CCCeEEEECCCCC---chhhHHHHHHHHHHHH-hCCCEEEEECCCCCCCCCCCcCcccccchhHHH-HHHHHHH------
Confidence 3477999999542 22211 1112244554 569999999999887664331 1111222 2222232
Q ss_pred CCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 157 FPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 157 ~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
.+.++++++|||+||.+|+.++.+ .+.+++++|+++|.
T Consensus 98 ----l~~~~~~lvG~S~Gg~ia~~~a~~------~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 98 ----LDIEKAHLVGNSMGGATALNFALE------YPDRIGKLILMGPG 135 (282)
T ss_pred ----cCCCCeeEEEECchHHHHHHHHHh------ChHhhceEEEECCC
Confidence 256799999999999999999987 55678999998874
No 53
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.43 E-value=7.8e-11 Score=105.14 Aligned_cols=99 Identities=23% Similarity=0.293 Sum_probs=67.3
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCch----hHHH----HHH-HHHHHhhcCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQ----YEDG----IDA-LKFIDSSFID 153 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~----~~D~----~~a-~~~l~~~~~~ 153 (299)
+.|+||++||.|. +. ..+...+..++ + +|.|+++|+|+.+....+.. .++. .+. .+|+..
T Consensus 104 ~~p~vvllHG~~~---~~--~~~~~~~~~L~-~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~---- 172 (402)
T PLN02894 104 DAPTLVMVHGYGA---SQ--GFFFRNFDALA-S-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKA---- 172 (402)
T ss_pred CCCEEEEECCCCc---ch--hHHHHHHHHHH-h-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHH----
Confidence 5689999999653 22 22445566775 3 69999999998766543321 1121 112 233322
Q ss_pred CCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 154 IQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 154 ~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
.+.++++++|||+||.+|+.++.+ .+..++++|+++|..
T Consensus 173 -------l~~~~~~lvGhS~GG~la~~~a~~------~p~~v~~lvl~~p~~ 211 (402)
T PLN02894 173 -------KNLSNFILLGHSFGGYVAAKYALK------HPEHVQHLILVGPAG 211 (402)
T ss_pred -------cCCCCeEEEEECHHHHHHHHHHHh------CchhhcEEEEECCcc
Confidence 245689999999999999999988 556799999998753
No 54
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.42 E-value=1.4e-11 Score=102.04 Aligned_cols=100 Identities=21% Similarity=0.269 Sum_probs=70.4
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC---chhHHHHHHHHHHHhhcCCCCCCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP---SQYEDGIDALKFIDSSFIDIQNFPA 159 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~---~~~~D~~~a~~~l~~~~~~~~~~~~ 159 (299)
+.|+||++||.|. +. ..+..++..+. .|+.|+++|+++.+....+ ..+++..+.+..+.+..
T Consensus 12 ~~~~li~~hg~~~---~~--~~~~~~~~~l~--~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~-------- 76 (251)
T TIGR02427 12 GAPVLVFINSLGT---DL--RMWDPVLPALT--PDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHL-------- 76 (251)
T ss_pred CCCeEEEEcCccc---ch--hhHHHHHHHhh--cccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--------
Confidence 5689999999542 22 23566677664 5899999999987655332 23455555455544433
Q ss_pred CCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 160 CADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 160 ~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
+.++++++|||+||.+|+.+|.+ .+..++++|++++..
T Consensus 77 --~~~~v~liG~S~Gg~~a~~~a~~------~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 77 --GIERAVFCGLSLGGLIAQGLAAR------RPDRVRALVLSNTAA 114 (251)
T ss_pred --CCCceEEEEeCchHHHHHHHHHH------CHHHhHHHhhccCcc
Confidence 45689999999999999999987 455788888887643
No 55
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.41 E-value=5.1e-11 Score=100.91 Aligned_cols=102 Identities=24% Similarity=0.256 Sum_probs=70.3
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC------chhHHHHHHHHHHHhhcCCCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP------SQYEDGIDALKFIDSSFIDIQN 156 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~------~~~~D~~~a~~~l~~~~~~~~~ 156 (299)
..|.||++||++. +... +......++.+.|+.|+++|+|+.+....+ ..+++..+.+..+.+..
T Consensus 24 ~~~~vl~~hG~~g---~~~~--~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~----- 93 (288)
T TIGR01250 24 EKIKLLLLHGGPG---MSHE--YLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKL----- 93 (288)
T ss_pred CCCeEEEEcCCCC---ccHH--HHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHc-----
Confidence 3578999999642 2211 233344454456999999999987655433 12455555555555543
Q ss_pred CCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 157 FPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 157 ~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
+.++++++|||+||.+|+.++.. .+..++++|+.++..
T Consensus 94 -----~~~~~~liG~S~Gg~ia~~~a~~------~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 94 -----GLDKFYLLGHSWGGMLAQEYALK------YGQHLKGLIISSMLD 131 (288)
T ss_pred -----CCCcEEEEEeehHHHHHHHHHHh------CccccceeeEecccc
Confidence 35679999999999999999987 555789999887754
No 56
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=99.41 E-value=7.1e-12 Score=111.36 Aligned_cols=188 Identities=16% Similarity=0.173 Sum_probs=110.8
Q ss_pred CCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCC----cEEEeecCCCC----CCCCCCchh
Q 040187 66 TRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVP----AVVISVNYRRS----PEHRCPSQY 137 (299)
Q Consensus 66 ~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g----~~v~~~dyr~~----~~~~~~~~~ 137 (299)
+....+.+|+|.+...++.|+|+++||+.|... .. ....+..+. +.| ++++.+|.... .+.+....+
T Consensus 191 g~~r~v~VY~P~~y~~~~~PvlyllDG~~w~~~---~~-~~~~ld~li-~~g~i~P~ivV~id~~~~~~R~~el~~~~~f 265 (411)
T PRK10439 191 GNSRRVWIYTTGDAAPEERPLAILLDGQFWAES---MP-VWPALDSLT-HRGQLPPAVYLLIDAIDTTHRSQELPCNADF 265 (411)
T ss_pred CCceEEEEEECCCCCCCCCCEEEEEECHHhhhc---CC-HHHHHHHHH-HcCCCCceEEEEECCCCcccccccCCchHHH
Confidence 567889999998764467899999999887521 11 234455555 334 45677764211 111111111
Q ss_pred -HHH-HHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCC---h
Q 040187 138 -EDG-IDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERT---E 212 (299)
Q Consensus 138 -~D~-~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~---~ 212 (299)
+.+ .+.+-++.++. ....|+++.+|+|+|+||..|+.++++ .+..+.+++++||.+-..... .
T Consensus 266 ~~~l~~eLlP~I~~~y------~~~~d~~~~~IaG~S~GGl~AL~~al~------~Pd~Fg~v~s~Sgs~ww~~~~~~~~ 333 (411)
T PRK10439 266 WLAVQQELLPQVRAIA------PFSDDADRTVVAGQSFGGLAALYAGLH------WPERFGCVLSQSGSFWWPHRGGQQE 333 (411)
T ss_pred HHHHHHHHHHHHHHhC------CCCCCccceEEEEEChHHHHHHHHHHh------CcccccEEEEeccceecCCccCCch
Confidence 112 22334444442 334588899999999999999999998 777899999999976322110 0
Q ss_pred H--HHhhcCCCCcchhhHHHHHHHcCCCCCCC--CcHHHHHHHHHHHHCCCcEEEEEeCCCceEEEec
Q 040187 213 S--EMRFQRDPLVGLKLTDWMWKAFLPEGSNR--DHPAANRYYEGLKKCGKDAYLIEYPNAVHCFYLF 276 (299)
Q Consensus 213 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~ 276 (299)
. ......... ...-.+.++..+... ......++.+.|+++|.++++.+++| +|.+...
T Consensus 334 ~~l~~~l~~~~~-----~~~~lr~~i~~G~~E~~~~~~~~~l~~~L~~~G~~~~~~~~~G-GHd~~~W 395 (411)
T PRK10439 334 GVLLEQLKAGEV-----SARGLRIVLEAGRREPMIMRANQALYAQLHPAGHSVFWRQVDG-GHDALCW 395 (411)
T ss_pred hHHHHHHHhccc-----CCCCceEEEeCCCCCchHHHHHHHHHHHHHHCCCcEEEEECCC-CcCHHHH
Confidence 0 000000000 000001233223222 12233489999999999999999998 5965443
No 57
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.41 E-value=2.5e-11 Score=102.73 Aligned_cols=100 Identities=18% Similarity=0.238 Sum_probs=71.7
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC----chhHHHHHHHHHHHhhcCCCCCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP----SQYEDGIDALKFIDSSFIDIQNFP 158 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~----~~~~D~~~a~~~l~~~~~~~~~~~ 158 (299)
+.|+||++||.+ ++ ...+..++..++ + ++.|+.+|+|+.+....+ ..+++..+.+..+.+..
T Consensus 27 ~~~~vv~~hG~~---~~--~~~~~~~~~~l~-~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~------- 92 (278)
T TIGR03056 27 AGPLLLLLHGTG---AS--THSWRDLMPPLA-R-SFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAE------- 92 (278)
T ss_pred CCCeEEEEcCCC---CC--HHHHHHHHHHHh-h-CcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHc-------
Confidence 358999999954 22 233667777775 3 699999999987765432 34566655555555543
Q ss_pred CCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 159 ACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 159 ~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
+.++++++|||+||.+|+.++.+ .+.+++++|++++..
T Consensus 93 ---~~~~~~lvG~S~Gg~~a~~~a~~------~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 93 ---GLSPDGVIGHSAGAAIALRLALD------GPVTPRMVVGINAAL 130 (278)
T ss_pred ---CCCCceEEEECccHHHHHHHHHh------CCcccceEEEEcCcc
Confidence 34678999999999999999987 455688888887654
No 58
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=99.40 E-value=1.1e-12 Score=121.88 Aligned_cols=114 Identities=27% Similarity=0.399 Sum_probs=89.5
Q ss_pred CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCC---------CCCCCc
Q 040187 65 ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSP---------EHRCPS 135 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~---------~~~~~~ 135 (299)
+.+++.+.+|+|......+.||+||+|||||..|+.... .......++....++||.++||+.+ ..+...
T Consensus 93 sEDCLylNV~tp~~~~~~~~pV~V~iHGG~~~~gs~~~~-~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~d~~~~gN~ 171 (545)
T KOG1516|consen 93 SEDCLYLNVYTPQGCSESKLPVMVYIHGGGFQFGSASSF-EIISPAYVLLLKDVVVVTINYRLGPLGFLSTGDSAAPGNL 171 (545)
T ss_pred cCCCceEEEeccCCCccCCCCEEEEEeCCceeeccccch-hhcCchhccccCCEEEEEecccceeceeeecCCCCCCCcc
Confidence 578999999999876321289999999999998885432 1112233444668999999999742 223556
Q ss_pred hhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHH
Q 040187 136 QYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 136 ~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~ 184 (299)
.+.|...|++|+.++.. .+|.|+++|.|+|||+||.++..+...
T Consensus 172 gl~Dq~~AL~wv~~~I~-----~FGGdp~~vTl~G~saGa~~v~~l~~S 215 (545)
T KOG1516|consen 172 GLFDQLLALRWVKDNIP-----SFGGDPKNVTLFGHSAGAASVSLLTLS 215 (545)
T ss_pred cHHHHHHHHHHHHHHHH-----hcCCCCCeEEEEeechhHHHHHHHhcC
Confidence 78899999999999986 888999999999999999999887764
No 59
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.40 E-value=5.6e-12 Score=103.33 Aligned_cols=218 Identities=16% Similarity=0.129 Sum_probs=123.5
Q ss_pred CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeec-CCCC--CCC--------CC
Q 040187 65 ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVN-YRRS--PEH--------RC 133 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~d-yr~~--~~~--------~~ 133 (299)
.+....+++|.|...+. ..|+||.+||++ ++........-..++|++.||.|+.|| |... +.. +-
T Consensus 43 ~g~~r~y~l~vP~g~~~-~apLvv~LHG~~---~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~ 118 (312)
T COG3509 43 NGLKRSYRLYVPPGLPS-GAPLVVVLHGSG---GSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADR 118 (312)
T ss_pred CCCccceEEEcCCCCCC-CCCEEEEEecCC---CChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccc
Confidence 46788999999998753 449999999965 333332222335789999999999995 4422 111 11
Q ss_pred CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC-CCCC-CC
Q 040187 134 PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF-GGEE-RT 211 (299)
Q Consensus 134 ~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~-~~~~-~~ 211 (299)
...++|+-...+-+..... ++++|+.||++.|-|.||.||..++.. .+..++++..+++.. .... ..
T Consensus 119 ~~g~ddVgflr~lva~l~~-----~~gidp~RVyvtGlS~GG~Ma~~lac~------~p~~faa~A~VAg~~~~~~a~~~ 187 (312)
T COG3509 119 RRGVDDVGFLRALVAKLVN-----EYGIDPARVYVTGLSNGGRMANRLACE------YPDIFAAIAPVAGLLALGVACTP 187 (312)
T ss_pred cCCccHHHHHHHHHHHHHH-----hcCcCcceEEEEeeCcHHHHHHHHHhc------CcccccceeeeecccCCCcccCC
Confidence 1233444333333333222 667999999999999999999999987 455677776666554 2110 00
Q ss_pred ---hHHHhhcC--CC------------------CcchhhHHHHHHHcCCCCCCCCc-HHH---HHHHHHHHHCCCcEEEE
Q 040187 212 ---ESEMRFQR--DP------------------LVGLKLTDWMWKAFLPEGSNRDH-PAA---NRYYEGLKKCGKDAYLI 264 (299)
Q Consensus 212 ---~~~~~~~~--~~------------------~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~l~~~g~~~~~~ 264 (299)
-+.+.... +| ..+.......|..+-......+. +.. ..+.-...+.+.+++++
T Consensus 188 ~rp~~~m~~~G~~Dp~~p~~gG~~~~g~g~~~~~v~~~~~~~~Waa~ng~~~~p~~~~~~~~~~~~~~~~~~~~~~V~~y 267 (312)
T COG3509 188 PRPVSVMAFHGTADPLNPYHGGGVPIGRGQRDGVVSAADLAARWAAVNGCQAGPDTAELPDVGDGTDYDTCDGNARVELY 267 (312)
T ss_pred CCchhHHHhcCCCCCCCCCCCCCcccccccccccccHHHHHHHHHHhcCCCCCCcccccCCCcccceeeccCCCcceEEE
Confidence 01111100 11 11223344444443322111110 000 01122344556789999
Q ss_pred EeCCCceEEEecC--------CchHHHHHHHHHHHHHHhhh
Q 040187 265 EYPNAVHCFYLFP--------EVLECSLFLKEVKDFICSQA 297 (299)
Q Consensus 265 ~~~g~~H~f~~~~--------~~~~~~~~~~~i~~fl~~~~ 297 (299)
.+.|.+|.+..-. .....-..-+.|.+|.+.+.
T Consensus 268 ~i~g~GH~wp~~~~~~~~~~g~~t~~~dat~~iw~Ff~~~~ 308 (312)
T COG3509 268 TIDGGGHTWPGGTQYGPAALGMSTRGFDATERIWRFFRQHR 308 (312)
T ss_pred EEeCCcccCcCCCCCCcccccccccCcchHHHHHHHHHhcc
Confidence 9999999987411 11223345667777877664
No 60
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.39 E-value=2.5e-12 Score=103.34 Aligned_cols=130 Identities=18% Similarity=0.322 Sum_probs=98.8
Q ss_pred CCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHH
Q 040187 67 RDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKF 146 (299)
Q Consensus 67 ~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~ 146 (299)
...++.|++|... +..|+|+|+|| | ......|..+++.++ .+||+|++++....-.......++++.+.++|
T Consensus 31 pPkpLlI~tP~~~--G~yPVilF~HG--~---~l~ns~Ys~lL~HIA-SHGfIVVAPQl~~~~~p~~~~Ei~~aa~V~~W 102 (307)
T PF07224_consen 31 PPKPLLIVTPSEA--GTYPVILFLHG--F---NLYNSFYSQLLAHIA-SHGFIVVAPQLYTLFPPDGQDEIKSAASVINW 102 (307)
T ss_pred CCCCeEEecCCcC--CCccEEEEeec--h---hhhhHHHHHHHHHHh-hcCeEEEechhhcccCCCchHHHHHHHHHHHH
Confidence 5678899999876 78999999999 2 334556899999998 78999999995532223445678899999999
Q ss_pred HHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCC
Q 040187 147 IDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 147 l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 208 (299)
+.+.....-...-..+.++++++|||.||..|..+|+... ....++++|.+.|+-...
T Consensus 103 L~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a----~~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 103 LPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA----TSLKFSALIGIDPVAGTS 160 (307)
T ss_pred HHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc----ccCchhheecccccCCCC
Confidence 9877432100122357789999999999999999998654 224789999999986543
No 61
>PLN02511 hydrolase
Probab=99.38 E-value=2.6e-11 Score=107.69 Aligned_cols=132 Identities=14% Similarity=0.106 Sum_probs=90.4
Q ss_pred eEEEEEEcCCCCEEEEEEecCCC-CCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC-
Q 040187 57 TSFDVSVDATRDLWFRLYSPTNT-TATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP- 134 (299)
Q Consensus 57 ~~~~~~~~~~~~i~~~i~~P~~~-~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~- 134 (299)
..+.+...|++.+.++++.+... .....|+||++||.+ |+........++..+. +.||.|+++|+|+.+..+..
T Consensus 72 ~re~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~---g~s~~~y~~~~~~~~~-~~g~~vv~~d~rG~G~s~~~~ 147 (388)
T PLN02511 72 RRECLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLT---GGSDDSYVRHMLLRAR-SKGWRVVVFNSRGCADSPVTT 147 (388)
T ss_pred eEEEEECCCCCEEEEEecCcccccCCCCCCEEEEECCCC---CCCCCHHHHHHHHHHH-HCCCEEEEEecCCCCCCCCCC
Confidence 34445556788888887654321 113569999999943 2322222234555554 77999999999987655321
Q ss_pred ------chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 135 ------SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 135 ------~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
...+|+..+++++.... ...+++++|+|+||.+++.++.+..+. ..+.+++++++.++
T Consensus 148 ~~~~~~~~~~Dl~~~i~~l~~~~----------~~~~~~lvG~SlGg~i~~~yl~~~~~~----~~v~~~v~is~p~~ 211 (388)
T PLN02511 148 PQFYSASFTGDLRQVVDHVAGRY----------PSANLYAAGWSLGANILVNYLGEEGEN----CPLSGAVSLCNPFD 211 (388)
T ss_pred cCEEcCCchHHHHHHHHHHHHHC----------CCCCEEEEEechhHHHHHHHHHhcCCC----CCceEEEEECCCcC
Confidence 45689999999997754 346899999999999999998874421 13788887776554
No 62
>PLN02965 Probable pheophorbidase
Probab=99.38 E-value=6.7e-11 Score=99.26 Aligned_cols=97 Identities=15% Similarity=0.104 Sum_probs=70.2
Q ss_pred EEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC----chhHHHHHHHHHHHhhcCCCCCCCCCC
Q 040187 86 VIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP----SQYEDGIDALKFIDSSFIDIQNFPACA 161 (299)
Q Consensus 86 ~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~----~~~~D~~~a~~~l~~~~~~~~~~~~~~ 161 (299)
.||++||.+ ++. ..++..+..|+ +.||.|+++|+|+.+.+..+ ..+++..+.+.-+.+..
T Consensus 5 ~vvllHG~~---~~~--~~w~~~~~~L~-~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l---------- 68 (255)
T PLN02965 5 HFVFVHGAS---HGA--WCWYKLATLLD-AAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDL---------- 68 (255)
T ss_pred EEEEECCCC---CCc--CcHHHHHHHHh-hCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhc----------
Confidence 489999965 232 23677778886 66999999999998765432 23455444444444432
Q ss_pred CC-CcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 162 DI-KQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 162 d~-~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
+. ++++++||||||.+|+.++.+ .+.+++++|++++.
T Consensus 69 ~~~~~~~lvGhSmGG~ia~~~a~~------~p~~v~~lvl~~~~ 106 (255)
T PLN02965 69 PPDHKVILVGHSIGGGSVTEALCK------FTDKISMAIYVAAA 106 (255)
T ss_pred CCCCCEEEEecCcchHHHHHHHHh------CchheeEEEEEccc
Confidence 23 589999999999999999987 56678999998864
No 63
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.38 E-value=1.5e-10 Score=101.68 Aligned_cols=132 Identities=16% Similarity=0.166 Sum_probs=89.2
Q ss_pred CceEEEEEEcCCCCEEEEEEecCCCCCCCccEEEEEcC---CccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCC
Q 040187 55 GVTSFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHG---GGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEH 131 (299)
Q Consensus 55 ~~~~~~~~~~~~~~i~~~i~~P~~~~~~~~p~vv~~HG---Gg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~ 131 (299)
+.+..++.+. .+.+.+..|.|......+.| ||++|| .+|+. +.. ....+++.++ +.||.|+++|+|+.+..
T Consensus 35 ~~~~~~~v~~-~~~~~l~~~~~~~~~~~~~p-vl~v~~~~~~~~~~-d~~--~~~~~~~~L~-~~G~~V~~~D~~g~g~s 108 (350)
T TIGR01836 35 GVTPKEVVYR-EDKVVLYRYTPVKDNTHKTP-LLIVYALVNRPYML-DLQ--EDRSLVRGLL-ERGQDVYLIDWGYPDRA 108 (350)
T ss_pred CCCCCceEEE-cCcEEEEEecCCCCcCCCCc-EEEeccccccceec-cCC--CCchHHHHHH-HCCCeEEEEeCCCCCHH
Confidence 3444555554 45677777877643222334 888998 22221 111 1356788887 78999999999976533
Q ss_pred CCC----chh-HHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 132 RCP----SQY-EDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 132 ~~~----~~~-~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
... ... +|+.++++++.+.. ..+++.++|||+||.+++.++.. .+..++++|+++|.++
T Consensus 109 ~~~~~~~d~~~~~~~~~v~~l~~~~----------~~~~i~lvGhS~GG~i~~~~~~~------~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 109 DRYLTLDDYINGYIDKCVDYICRTS----------KLDQISLLGICQGGTFSLCYAAL------YPDKIKNLVTMVTPVD 172 (350)
T ss_pred HhcCCHHHHHHHHHHHHHHHHHHHh----------CCCcccEEEECHHHHHHHHHHHh------CchheeeEEEeccccc
Confidence 222 222 34677888888765 35789999999999999998876 4456899999998776
Q ss_pred CC
Q 040187 207 GE 208 (299)
Q Consensus 207 ~~ 208 (299)
..
T Consensus 173 ~~ 174 (350)
T TIGR01836 173 FE 174 (350)
T ss_pred cC
Confidence 43
No 64
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.38 E-value=1.2e-11 Score=99.85 Aligned_cols=133 Identities=25% Similarity=0.322 Sum_probs=100.0
Q ss_pred CCCceEEEEEEc--CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCC-
Q 040187 53 KNGVTSFDVSVD--ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSP- 129 (299)
Q Consensus 53 ~~~~~~~~~~~~--~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~- 129 (299)
.+.+++.++++. ++..|..++..|...+ ++.|.||.+||-+ |.... ...+ -.++ ..||.|+++|.|+.+
T Consensus 51 ~~~ve~ydvTf~g~~g~rI~gwlvlP~~~~-~~~P~vV~fhGY~---g~~g~--~~~~-l~wa-~~Gyavf~MdvRGQg~ 122 (321)
T COG3458 51 LPRVEVYDVTFTGYGGARIKGWLVLPRHEK-GKLPAVVQFHGYG---GRGGE--WHDM-LHWA-VAGYAVFVMDVRGQGS 122 (321)
T ss_pred CCceEEEEEEEeccCCceEEEEEEeecccC-CccceEEEEeecc---CCCCC--cccc-cccc-ccceeEEEEecccCCC
Confidence 457889999998 6678888999998765 7899999999933 22211 1122 2344 669999999999632
Q ss_pred ---------CC-CCC-----------------chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHH
Q 040187 130 ---------EH-RCP-----------------SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVA 182 (299)
Q Consensus 130 ---------~~-~~~-----------------~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a 182 (299)
+. ..| ..+.|+..|++.+..... +|.+||++.|.|.||.||+..+
T Consensus 123 ~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~--------vde~Ri~v~G~SqGGglalaaa 194 (321)
T COG3458 123 SSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDE--------VDEERIGVTGGSQGGGLALAAA 194 (321)
T ss_pred ccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCc--------cchhheEEeccccCchhhhhhh
Confidence 11 111 235799999999988765 8999999999999999999988
Q ss_pred HHhccCCCCCCccceEEEecccCCCC
Q 040187 183 VLADGCNFSRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~~i~~~p~~~~~ 208 (299)
.- .++++++++.+|++...
T Consensus 195 al-------~~rik~~~~~~Pfl~df 213 (321)
T COG3458 195 AL-------DPRIKAVVADYPFLSDF 213 (321)
T ss_pred hc-------Chhhhcccccccccccc
Confidence 74 34899999999987643
No 65
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.37 E-value=6.6e-11 Score=102.91 Aligned_cols=128 Identities=18% Similarity=0.161 Sum_probs=81.9
Q ss_pred eEEEEEEc-CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC-CC
Q 040187 57 TSFDVSVD-ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR-CP 134 (299)
Q Consensus 57 ~~~~~~~~-~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~-~~ 134 (299)
..++++++ .+..|+..+..|.+. ++.|+||++-|- -+...+ +.......+..+|++++.+|.++.+++. .+
T Consensus 164 ~i~~v~iP~eg~~I~g~LhlP~~~--~p~P~VIv~gGl----Ds~qeD-~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~ 236 (411)
T PF06500_consen 164 PIEEVEIPFEGKTIPGYLHLPSGE--KPYPTVIVCGGL----DSLQED-LYRLFRDYLAPRGIAMLTVDMPGQGESPKWP 236 (411)
T ss_dssp EEEEEEEEETTCEEEEEEEESSSS--S-EEEEEEE--T----TS-GGG-GHHHHHCCCHHCT-EEEEE--TTSGGGTTT-
T ss_pred CcEEEEEeeCCcEEEEEEEcCCCC--CCCCEEEEeCCc----chhHHH-HHHHHHHHHHhCCCEEEEEccCCCcccccCC
Confidence 45666665 468899888899854 788988876661 122222 2233333233889999999999876542 22
Q ss_pred chhHH----HHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 135 SQYED----GIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 135 ~~~~D----~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
.-+| ..++++||.+.+. +|.+||+++|.|+||+.|..+|.. .+.+++++|.+.|.+.
T Consensus 237 -l~~D~~~l~~aVLd~L~~~p~--------VD~~RV~~~G~SfGGy~AvRlA~l------e~~RlkavV~~Ga~vh 297 (411)
T PF06500_consen 237 -LTQDSSRLHQAVLDYLASRPW--------VDHTRVGAWGFSFGGYYAVRLAAL------EDPRLKAVVALGAPVH 297 (411)
T ss_dssp -S-S-CCHHHHHHHHHHHHSTT--------EEEEEEEEEEETHHHHHHHHHHHH------TTTT-SEEEEES---S
T ss_pred -CCcCHHHHHHHHHHHHhcCCc--------cChhheEEEEeccchHHHHHHHHh------cccceeeEeeeCchHh
Confidence 1122 4567888888764 899999999999999999999875 4568999999999764
No 66
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.36 E-value=8.6e-11 Score=99.79 Aligned_cols=99 Identities=20% Similarity=0.128 Sum_probs=70.4
Q ss_pred ccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCc---hhHHHHHHHHHHHhhcCCCCCCCCC
Q 040187 84 LPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPS---QYEDGIDALKFIDSSFIDIQNFPAC 160 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~---~~~D~~~a~~~l~~~~~~~~~~~~~ 160 (299)
.+.||++||-| ++. ..+..++..|. + ++.|+++|+|+.+.+..+. .+++..+.+.-+.+..
T Consensus 25 ~~plvllHG~~---~~~--~~w~~~~~~L~-~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l--------- 88 (276)
T TIGR02240 25 LTPLLIFNGIG---ANL--ELVFPFIEALD-P-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYL--------- 88 (276)
T ss_pred CCcEEEEeCCC---cch--HHHHHHHHHhc-c-CceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHh---------
Confidence 36789999943 232 23677777774 3 7999999999887664332 2344444344344432
Q ss_pred CCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 161 ADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 161 ~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
+.+++.|+|||+||.+|+.+|.+ .+..++++|++++..
T Consensus 89 -~~~~~~LvG~S~GG~va~~~a~~------~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 89 -DYGQVNAIGVSWGGALAQQFAHD------YPERCKKLILAATAA 126 (276)
T ss_pred -CcCceEEEEECHHHHHHHHHHHH------CHHHhhheEEeccCC
Confidence 35679999999999999999998 566899999998765
No 67
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.35 E-value=8.6e-12 Score=115.79 Aligned_cols=123 Identities=15% Similarity=0.068 Sum_probs=91.4
Q ss_pred CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC-----C-CchhH
Q 040187 65 ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR-----C-PSQYE 138 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~-----~-~~~~~ 138 (299)
++..+.+++|.|++. ++.|+||++||-|........ ........++ +.||.|+.+|+|+.+.+. + ....+
T Consensus 5 DG~~L~~~~~~P~~~--~~~P~Il~~~gyg~~~~~~~~-~~~~~~~~l~-~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~ 80 (550)
T TIGR00976 5 DGTRLAIDVYRPAGG--GPVPVILSRTPYGKDAGLRWG-LDKTEPAWFV-AQGYAVVIQDTRGRGASEGEFDLLGSDEAA 80 (550)
T ss_pred CCCEEEEEEEecCCC--CCCCEEEEecCCCCchhhccc-cccccHHHHH-hCCcEEEEEeccccccCCCceEecCcccch
Confidence 566788899999864 578999999995532110000 0112345565 789999999999865442 2 46779
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 139 DGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 139 D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
|+.++++|+.++.. ...+|+++|+|+||.+++.+|.. .+..++++|..+++.+
T Consensus 81 D~~~~i~~l~~q~~---------~~~~v~~~G~S~GG~~a~~~a~~------~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 81 DGYDLVDWIAKQPW---------CDGNVGMLGVSYLAVTQLLAAVL------QPPALRAIAPQEGVWD 133 (550)
T ss_pred HHHHHHHHHHhCCC---------CCCcEEEEEeChHHHHHHHHhcc------CCCceeEEeecCcccc
Confidence 99999999988752 33699999999999999999886 5568999998887654
No 68
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.35 E-value=3e-12 Score=104.43 Aligned_cols=172 Identities=17% Similarity=0.238 Sum_probs=102.7
Q ss_pred CCCCEEEEEEecCCC-CCCCc-cEEEEEcCCccccccCCCchhHHHH---HHH---HhhCCcEEEeecCCCC---CCCCC
Q 040187 65 ATRDLWFRLYSPTNT-TATNL-PVIVYFHGGGFAILAANSKVYDDAC---RRL---AVEVPAVVISVNYRRS---PEHRC 133 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~-~~~~~-p~vv~~HGGg~~~g~~~~~~~~~~~---~~l---a~~~g~~v~~~dyr~~---~~~~~ 133 (299)
.+..+.+++|.|++. ++++. |.++|+||+|-. |+ +. ..... ..+ ..+.+|-|++|.|.-- -+..-
T Consensus 170 tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~-g~-dn--~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t 245 (387)
T COG4099 170 TGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQG-GS-DN--DKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKT 245 (387)
T ss_pred cCceeeEEEecccccCCCCccccEEEEEecCCCC-Cc-hh--hhhhhcCccceeeecccCceEEEccccccccccccccc
Confidence 356899999999876 33455 999999998853 22 11 11111 111 1244577777776530 11111
Q ss_pred CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChH
Q 040187 134 PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTES 213 (299)
Q Consensus 134 ~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~ 213 (299)
...+....++++-+... .+++|.+||++.|.|+||..++.++.+ .|..+++.+++++--+. ...
T Consensus 246 ~~~l~~~idli~~vlas-------~ynID~sRIYviGlSrG~~gt~al~~k------fPdfFAaa~~iaG~~d~---v~l 309 (387)
T COG4099 246 LLYLIEKIDLILEVLAS-------TYNIDRSRIYVIGLSRGGFGTWALAEK------FPDFFAAAVPIAGGGDR---VYL 309 (387)
T ss_pred chhHHHHHHHHHHHHhh-------ccCcccceEEEEeecCcchhhHHHHHh------CchhhheeeeecCCCch---hhh
Confidence 12333344444422221 556999999999999999999999998 66789999998875431 112
Q ss_pred HHhhcCCCCcchhhHHHHHHHcCCCCCCCCcHHHH--HHHHHHHHCCCcEEEEEeC
Q 040187 214 EMRFQRDPLVGLKLTDWMWKAFLPEGSNRDHPAAN--RYYEGLKKCGKDAYLIEYP 267 (299)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~g~~~~~~~~~ 267 (299)
...+...|++ +.+...|...|..+ -.+++|++.+.+|.+..|.
T Consensus 310 v~~lk~~piW-----------vfhs~dDkv~Pv~nSrv~y~~lk~~~~kv~Ytaf~ 354 (387)
T COG4099 310 VRTLKKAPIW-----------VFHSSDDKVIPVSNSRVLYERLKALDRKVNYTAFL 354 (387)
T ss_pred hhhhccCceE-----------EEEecCCCccccCcceeehHHHHhhccccchhhhh
Confidence 2334445552 22333333334333 4567787777776665554
No 69
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.34 E-value=3.1e-10 Score=100.08 Aligned_cols=100 Identities=18% Similarity=0.119 Sum_probs=68.3
Q ss_pred ccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC----chhHHHHHHHHHHHhhcCCCCCCCC
Q 040187 84 LPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP----SQYEDGIDALKFIDSSFIDIQNFPA 159 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~----~~~~D~~~a~~~l~~~~~~~~~~~~ 159 (299)
.|.||++||.+ ++ ...+...+..|+ + +|.|+++|+++.+.+..+ ..+++..+.+.-+.+..
T Consensus 88 gp~lvllHG~~---~~--~~~w~~~~~~L~-~-~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l-------- 152 (360)
T PLN02679 88 GPPVLLVHGFG---AS--IPHWRRNIGVLA-K-NYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEV-------- 152 (360)
T ss_pred CCeEEEECCCC---CC--HHHHHHHHHHHh-c-CCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHh--------
Confidence 47899999954 22 233667777775 4 799999999987765433 22344433333333322
Q ss_pred CCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 160 CADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 160 ~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
..++++|+|||+||.+|+.++... .+.+++++|++++..
T Consensus 153 --~~~~~~lvGhS~Gg~ia~~~a~~~-----~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 153 --VQKPTVLIGNSVGSLACVIAASES-----TRDLVRGLVLLNCAG 191 (360)
T ss_pred --cCCCeEEEEECHHHHHHHHHHHhc-----ChhhcCEEEEECCcc
Confidence 346899999999999998887631 356799999998753
No 70
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.32 E-value=2.1e-11 Score=98.88 Aligned_cols=122 Identities=28% Similarity=0.369 Sum_probs=86.8
Q ss_pred EEEEEEcCCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC---
Q 040187 58 SFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP--- 134 (299)
Q Consensus 58 ~~~~~~~~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~--- 134 (299)
.++++++ +..+.+++|.-... ....|++++.||||+. .-+ +..++..+.....+.|+++|.|+.++..+.
T Consensus 50 kedv~i~-~~~~t~n~Y~t~~~-~t~gpil~l~HG~G~S---~LS--fA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~ 122 (343)
T KOG2564|consen 50 KEDVSID-GSDLTFNVYLTLPS-ATEGPILLLLHGGGSS---ALS--FAIFASELKSKIRCRCLALDLRGHGETKVENED 122 (343)
T ss_pred ccccccC-CCcceEEEEEecCC-CCCccEEEEeecCccc---chh--HHHHHHHHHhhcceeEEEeeccccCccccCChh
Confidence 3556665 34446777754332 1467999999999863 222 688899999899999999999998877654
Q ss_pred -----chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEec
Q 040187 135 -----SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQ 202 (299)
Q Consensus 135 -----~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~ 202 (299)
....|..+.++.+... .+.+|+|+||||||.+|...|.... -+.+.|++.+.
T Consensus 123 dlS~eT~~KD~~~~i~~~fge-----------~~~~iilVGHSmGGaIav~~a~~k~-----lpsl~Gl~viD 179 (343)
T KOG2564|consen 123 DLSLETMSKDFGAVIKELFGE-----------LPPQIILVGHSMGGAIAVHTAASKT-----LPSLAGLVVID 179 (343)
T ss_pred hcCHHHHHHHHHHHHHHHhcc-----------CCCceEEEeccccchhhhhhhhhhh-----chhhhceEEEE
Confidence 3446777666666432 4577999999999999988887521 12466776653
No 71
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.32 E-value=2.3e-10 Score=97.70 Aligned_cols=99 Identities=20% Similarity=0.256 Sum_probs=73.8
Q ss_pred ccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC----chhHHHHHHHHHHHhhcCCCCCCCC
Q 040187 84 LPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP----SQYEDGIDALKFIDSSFIDIQNFPA 159 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~----~~~~D~~~a~~~l~~~~~~~~~~~~ 159 (299)
.|.||++||.+ .....+..++..+. .+|.|+++|+|+.+.+..+ ..+++..+.+..+.+..
T Consensus 34 ~~~iv~lHG~~-----~~~~~~~~~~~~l~--~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~-------- 98 (286)
T PRK03204 34 GPPILLCHGNP-----TWSFLYRDIIVALR--DRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHL-------- 98 (286)
T ss_pred CCEEEEECCCC-----ccHHHHHHHHHHHh--CCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHh--------
Confidence 47899999954 12233566666664 4699999999987655433 34577788888777654
Q ss_pred CCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 160 CADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 160 ~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
+.+++.++|||+||.+|+.++.. .+.+++++|++++..
T Consensus 99 --~~~~~~lvG~S~Gg~va~~~a~~------~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 99 --GLDRYLSMGQDWGGPISMAVAVE------RADRVRGVVLGNTWF 136 (286)
T ss_pred --CCCCEEEEEECccHHHHHHHHHh------ChhheeEEEEECccc
Confidence 45789999999999999999987 556799999877643
No 72
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.31 E-value=1.7e-10 Score=100.46 Aligned_cols=137 Identities=18% Similarity=0.165 Sum_probs=81.5
Q ss_pred CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCC-----------------Cchh----HHHHHHHHhhCCcEEEee
Q 040187 65 ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAAN-----------------SKVY----DDACRRLAVEVPAVVISV 123 (299)
Q Consensus 65 ~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~-----------------~~~~----~~~~~~la~~~g~~v~~~ 123 (299)
++..+.+..|.|. .++.+|+++||-|--.+... ...| ..++..|+ +.||.|+++
T Consensus 6 ~g~~l~~~~~~~~----~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~-~~G~~V~~~ 80 (332)
T TIGR01607 6 DGLLLKTYSWIVK----NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFN-KNGYSVYGL 80 (332)
T ss_pred CCCeEEEeeeecc----CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHH-HCCCcEEEe
Confidence 4455666777775 35689999999332212100 0012 46678887 789999999
Q ss_pred cCCCCCCCC-----------CCchhHHHHHHHHHHHhhcCC-----CCCCCCCC---C--CCcEEEEecChhHHHHHHHH
Q 040187 124 NYRRSPEHR-----------CPSQYEDGIDALKFIDSSFID-----IQNFPACA---D--IKQCFLAGDSAGGNLAHNVA 182 (299)
Q Consensus 124 dyr~~~~~~-----------~~~~~~D~~~a~~~l~~~~~~-----~~~~~~~~---d--~~~i~l~G~S~GG~lA~~~a 182 (299)
|.|+.+... +...++|+...++.+.+.... ...+++.+ . ..+++++||||||.+++.++
T Consensus 81 D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~ 160 (332)
T TIGR01607 81 DLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLL 160 (332)
T ss_pred cccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHH
Confidence 999865432 122346666666665442100 00000001 1 34699999999999999988
Q ss_pred HHhccCC--CCCCccceEEEecccCC
Q 040187 183 VLADGCN--FSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 183 ~~~~~~~--~~~~~~~~~i~~~p~~~ 206 (299)
....+.. .....++|+|+++|++.
T Consensus 161 ~~~~~~~~~~~~~~i~g~i~~s~~~~ 186 (332)
T TIGR01607 161 ELLGKSNENNDKLNIKGCISLSGMIS 186 (332)
T ss_pred HHhccccccccccccceEEEeccceE
Confidence 7643211 01125889998888753
No 73
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.31 E-value=1.7e-10 Score=95.28 Aligned_cols=96 Identities=20% Similarity=0.167 Sum_probs=66.7
Q ss_pred ccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 040187 84 LPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADI 163 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~ 163 (299)
.|.||++||.| ++ ...+..+...++ .++.|+.+|+|+.+...... ..+..+..+.+.+.. .
T Consensus 4 ~~~iv~~HG~~---~~--~~~~~~~~~~l~--~~~~vi~~d~~G~G~s~~~~-~~~~~~~~~~~~~~~-----------~ 64 (245)
T TIGR01738 4 NVHLVLIHGWG---MN--AEVFRCLDEELS--AHFTLHLVDLPGHGRSRGFG-PLSLADAAEAIAAQA-----------P 64 (245)
T ss_pred CceEEEEcCCC---Cc--hhhHHHHHHhhc--cCeEEEEecCCcCccCCCCC-CcCHHHHHHHHHHhC-----------C
Confidence 37899999954 23 233666777774 37999999999876553221 123334444444432 2
Q ss_pred CcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 164 KQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 164 ~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
++++++|||+||.+|+.++.+ .+..++++|++++.
T Consensus 65 ~~~~lvG~S~Gg~~a~~~a~~------~p~~v~~~il~~~~ 99 (245)
T TIGR01738 65 DPAIWLGWSLGGLVALHIAAT------HPDRVRALVTVASS 99 (245)
T ss_pred CCeEEEEEcHHHHHHHHHHHH------CHHhhheeeEecCC
Confidence 689999999999999999987 55578999988764
No 74
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.30 E-value=6e-10 Score=95.55 Aligned_cols=98 Identities=17% Similarity=0.248 Sum_probs=70.7
Q ss_pred ccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCc---hhHHHHHHHHHHHhhcCCCCCCCCC
Q 040187 84 LPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPS---QYEDGIDALKFIDSSFIDIQNFPAC 160 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~---~~~D~~~a~~~l~~~~~~~~~~~~~ 160 (299)
.|.||++||.+ ++ ...++.++..|+ +.+ .|+++|.|+.+.+..+. .+++..+.+..+.+..
T Consensus 27 g~~vvllHG~~---~~--~~~w~~~~~~L~-~~~-~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l--------- 90 (295)
T PRK03592 27 GDPIVFLHGNP---TS--SYLWRNIIPHLA-GLG-RCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDAL--------- 90 (295)
T ss_pred CCEEEEECCCC---CC--HHHHHHHHHHHh-hCC-EEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---------
Confidence 47899999954 23 233677888886 444 99999999887664432 3344434344444433
Q ss_pred CCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 161 ADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 161 ~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
..+++.++|||+||.+|+.++.+ .+.+++++|++++.
T Consensus 91 -~~~~~~lvGhS~Gg~ia~~~a~~------~p~~v~~lil~~~~ 127 (295)
T PRK03592 91 -GLDDVVLVGHDWGSALGFDWAAR------HPDRVRGIAFMEAI 127 (295)
T ss_pred -CCCCeEEEEECHHHHHHHHHHHh------ChhheeEEEEECCC
Confidence 34789999999999999999998 66789999999974
No 75
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.29 E-value=5e-10 Score=93.00 Aligned_cols=99 Identities=22% Similarity=0.185 Sum_probs=66.2
Q ss_pred ccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCc--hhHHHHHHHHHHHhhcCCCCCCCCCC
Q 040187 84 LPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPS--QYEDGIDALKFIDSSFIDIQNFPACA 161 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~--~~~D~~~a~~~l~~~~~~~~~~~~~~ 161 (299)
.|+||++||.+. + ...+..+...+ + +|.|+++|+|+.+....+. .+++..+.+.-+.+..
T Consensus 2 ~p~vvllHG~~~---~--~~~w~~~~~~l--~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~---------- 63 (242)
T PRK11126 2 LPWLVFLHGLLG---S--GQDWQPVGEAL--P-DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSY---------- 63 (242)
T ss_pred CCEEEEECCCCC---C--hHHHHHHHHHc--C-CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHc----------
Confidence 378999999552 2 23366777765 3 7999999999876554332 2233222222222322
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 162 DIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 162 d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
..+++.++|||+||.+|+.++.+.. +.+++++++.++..
T Consensus 64 ~~~~~~lvG~S~Gg~va~~~a~~~~-----~~~v~~lvl~~~~~ 102 (242)
T PRK11126 64 NILPYWLVGYSLGGRIAMYYACQGL-----AGGLCGLIVEGGNP 102 (242)
T ss_pred CCCCeEEEEECHHHHHHHHHHHhCC-----cccccEEEEeCCCC
Confidence 3578999999999999999999732 22489999887654
No 76
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.28 E-value=2.1e-10 Score=101.51 Aligned_cols=100 Identities=22% Similarity=0.215 Sum_probs=71.2
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCC---CchhHHHHHHHHHHHhhcCCCCCCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRC---PSQYEDGIDALKFIDSSFIDIQNFPA 159 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~---~~~~~D~~~a~~~l~~~~~~~~~~~~ 159 (299)
+.|.||++||.+ ++.. .+......|. + +|.|+++|+++.+.... ...+++..+.+..+.+..
T Consensus 130 ~~~~vl~~HG~~---~~~~--~~~~~~~~l~-~-~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~-------- 194 (371)
T PRK14875 130 DGTPVVLIHGFG---GDLN--NWLFNHAALA-A-GRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDAL-------- 194 (371)
T ss_pred CCCeEEEECCCC---Cccc--hHHHHHHHHh-c-CCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhc--------
Confidence 468899999944 2322 2566667765 3 59999999998765522 233455555555555433
Q ss_pred CCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 160 CADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 160 ~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
+.++++++|||+||.+|+.+|.. .+.+++++|+++|..
T Consensus 195 --~~~~~~lvG~S~Gg~~a~~~a~~------~~~~v~~lv~~~~~~ 232 (371)
T PRK14875 195 --GIERAHLVGHSMGGAVALRLAAR------APQRVASLTLIAPAG 232 (371)
T ss_pred --CCccEEEEeechHHHHHHHHHHh------CchheeEEEEECcCC
Confidence 56789999999999999999887 445789999998753
No 77
>PRK11071 esterase YqiA; Provisional
Probab=99.28 E-value=1.9e-10 Score=91.98 Aligned_cols=169 Identities=14% Similarity=0.094 Sum_probs=94.0
Q ss_pred cEEEEEcCCccccccCCCchhHHHHHHHHh-hCCcEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 040187 85 PVIVYFHGGGFAILAANSKVYDDACRRLAV-EVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADI 163 (299)
Q Consensus 85 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~-~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~ 163 (299)
|.||++||-+ ++........+...++. ..++.|+.+|.++.| ++..+.+..+.+.. +.
T Consensus 2 p~illlHGf~---ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------~~~~~~l~~l~~~~----------~~ 60 (190)
T PRK11071 2 STLLYLHGFN---SSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP--------ADAAELLESLVLEH----------GG 60 (190)
T ss_pred CeEEEECCCC---CCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH--------HHHHHHHHHHHHHc----------CC
Confidence 6899999933 23332111122233321 137999999998653 45666666666543 34
Q ss_pred CcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChHHH-----hhcC-CCCcchhhHHHHH-----
Q 040187 164 KQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTESEM-----RFQR-DPLVGLKLTDWMW----- 232 (299)
Q Consensus 164 ~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~~----- 232 (299)
++++++|+|+||.+|+.+|.+. + . .+|+++|..+......... .... ...++.....+..
T Consensus 61 ~~~~lvG~S~Gg~~a~~~a~~~------~--~-~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 131 (190)
T PRK11071 61 DPLGLVGSSLGGYYATWLSQCF------M--L-PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDLKVMQID 131 (190)
T ss_pred CCeEEEEECHHHHHHHHHHHHc------C--C-CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHHHhcCCc
Confidence 6899999999999999999873 2 1 3577888765210000000 0000 0111111111111
Q ss_pred -----HH--cCCCCCCCCcHHHHHHHHHHHHCCCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHH
Q 040187 233 -----KA--FLPEGSNRDHPAANRYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFIC 294 (299)
Q Consensus 233 -----~~--~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~ 294 (299)
.. ++.+..|...|... ..++.+ ..+..+++|++|.|.. .+++++.+.+|++
T Consensus 132 ~i~~~~~v~iihg~~De~V~~~~--a~~~~~---~~~~~~~~ggdH~f~~------~~~~~~~i~~fl~ 189 (190)
T PRK11071 132 PLESPDLIWLLQQTGDEVLDYRQ--AVAYYA---ACRQTVEEGGNHAFVG------FERYFNQIVDFLG 189 (190)
T ss_pred cCCChhhEEEEEeCCCCcCCHHH--HHHHHH---hcceEEECCCCcchhh------HHHhHHHHHHHhc
Confidence 01 23334444444432 444433 2356688999999844 3788899999975
No 78
>KOG3101 consensus Esterase D [General function prediction only]
Probab=99.27 E-value=5.7e-11 Score=92.39 Aligned_cols=203 Identities=12% Similarity=0.135 Sum_probs=120.5
Q ss_pred CCCEEEEEEecCCCCC-CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCC--CC-----CCC-CCC--
Q 040187 66 TRDLWFRLYSPTNTTA-TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYR--RS-----PEH-RCP-- 134 (299)
Q Consensus 66 ~~~i~~~i~~P~~~~~-~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr--~~-----~~~-~~~-- 134 (299)
+....+-+|.|...+. ++-|+++|+-| ..+...........+..|.+.|++|+.||-. +. ++. .|.
T Consensus 25 ~c~Mtf~vylPp~a~~~k~~P~lf~LSG---LTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~G 101 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDAPRGKRCPVLFYLSG---LTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQG 101 (283)
T ss_pred ccceEEEEecCCCcccCCcCceEEEecC---CcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCC
Confidence 3467788999987644 45899999999 4556555555667788888999999999954 21 111 111
Q ss_pred ---------chhHHHHHHHHHHHhhcCCC-CCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 135 ---------SQYEDGIDALKFIDSSFIDI-QNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 135 ---------~~~~D~~~a~~~l~~~~~~~-~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
.....-+..++|+.+...+. ..-...+|+.++.+.||||||+-|+..+++ .+.+.+.+-.++|.
T Consensus 102 AGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lk------n~~kykSvSAFAPI 175 (283)
T KOG3101|consen 102 AGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLK------NPSKYKSVSAFAPI 175 (283)
T ss_pred ceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEc------Ccccccceeccccc
Confidence 11123345666665543211 001234789999999999999999998887 55688999999998
Q ss_pred CCCCCCChHHHhhcCCCCcchhh-----HHHHHHHcCCCC------CCCCcHHHH------HHHHHHHHCC-CcEEEEEe
Q 040187 205 FGGEERTESEMRFQRDPLVGLKL-----TDWMWKAFLPEG------SNRDHPAAN------RYYEGLKKCG-KDAYLIEY 266 (299)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~------~~~~~~~~~------~~~~~l~~~g-~~~~~~~~ 266 (299)
++..........+.+.--..... .....+.+-... ....++... .+.++.++.. .++.++.-
T Consensus 176 ~NP~~cpWGqKAf~gYLG~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~~~v~~r~~ 255 (283)
T KOG3101|consen 176 CNPINCPWGQKAFTGYLGDNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQAPVVFRLQ 255 (283)
T ss_pred cCcccCcchHHHhhcccCCChHHHhhcchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhccccccEEEEee
Confidence 86554333322222100000000 001111111111 111111111 5555555443 68999999
Q ss_pred CCCceEEEecC
Q 040187 267 PNAVHCFYLFP 277 (299)
Q Consensus 267 ~g~~H~f~~~~ 277 (299)
+|.+|.+.+..
T Consensus 256 ~gyDHSYyfIa 266 (283)
T KOG3101|consen 256 EGYDHSYYFIA 266 (283)
T ss_pred cCCCcceeeeh
Confidence 99999998864
No 79
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.25 E-value=3.2e-10 Score=95.33 Aligned_cols=130 Identities=22% Similarity=0.189 Sum_probs=77.6
Q ss_pred EEEEEEcCCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchh
Q 040187 58 SFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQY 137 (299)
Q Consensus 58 ~~~~~~~~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~ 137 (299)
.+.+.+.++..++..-..+.. .+.+.+|++||-| . ....+-.-...|+. ...|.++|..+.+.+.-|.--
T Consensus 67 ~~~v~i~~~~~iw~~~~~~~~---~~~~plVliHGyG----A-g~g~f~~Nf~~La~--~~~vyaiDllG~G~SSRP~F~ 136 (365)
T KOG4409|consen 67 KKYVRIPNGIEIWTITVSNES---ANKTPLVLIHGYG----A-GLGLFFRNFDDLAK--IRNVYAIDLLGFGRSSRPKFS 136 (365)
T ss_pred eeeeecCCCceeEEEeecccc---cCCCcEEEEeccc----h-hHHHHHHhhhhhhh--cCceEEecccCCCCCCCCCCC
Confidence 344455544444444333332 3556688899933 1 11223344566763 899999999876654433322
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 138 EDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 138 ~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
.|...+..|..+..++ + ...-+.+++.|+|||+||++|...|++ .|.+|+-+||++|+--
T Consensus 137 ~d~~~~e~~fvesiE~--W-R~~~~L~KmilvGHSfGGYLaa~YAlK------yPerV~kLiLvsP~Gf 196 (365)
T KOG4409|consen 137 IDPTTAEKEFVESIEQ--W-RKKMGLEKMILVGHSFGGYLAAKYALK------YPERVEKLILVSPWGF 196 (365)
T ss_pred CCcccchHHHHHHHHH--H-HHHcCCcceeEeeccchHHHHHHHHHh------ChHhhceEEEeccccc
Confidence 2222222233222210 0 001245799999999999999999999 6678999999999743
No 80
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.24 E-value=2.6e-09 Score=96.48 Aligned_cols=116 Identities=13% Similarity=0.229 Sum_probs=76.3
Q ss_pred CCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHH-HHHHHHh--hCCcEEEeecCCCCCCCCCC----chhHH
Q 040187 67 RDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDD-ACRRLAV--EVPAVVISVNYRRSPEHRCP----SQYED 139 (299)
Q Consensus 67 ~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~-~~~~la~--~~g~~v~~~dyr~~~~~~~~----~~~~D 139 (299)
..+.+....|... ...|.||++||.+ ++.. .+.. .+..++. +.+|.|+++|+|+.+..+-+ ..+++
T Consensus 186 ~~l~~~~~gp~~~--~~k~~VVLlHG~~---~s~~--~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~ 258 (481)
T PLN03087 186 ESLFVHVQQPKDN--KAKEDVLFIHGFI---SSSA--FWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLRE 258 (481)
T ss_pred eEEEEEEecCCCC--CCCCeEEEECCCC---ccHH--HHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHH
Confidence 3455555555543 3457899999954 2322 2332 3344431 46999999999987654432 23455
Q ss_pred HHHHH-HHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 140 GIDAL-KFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 140 ~~~a~-~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
..+.+ ..+.+.. +.+++.++|||+||.+|+.++.+ .+.+++++|+++|..
T Consensus 259 ~a~~l~~~ll~~l----------g~~k~~LVGhSmGG~iAl~~A~~------~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 259 HLEMIERSVLERY----------KVKSFHIVAHSLGCILALALAVK------HPGAVKSLTLLAPPY 309 (481)
T ss_pred HHHHHHHHHHHHc----------CCCCEEEEEECHHHHHHHHHHHh------ChHhccEEEEECCCc
Confidence 55554 2444433 35789999999999999999988 566799999998754
No 81
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.24 E-value=1.1e-10 Score=99.84 Aligned_cols=133 Identities=23% Similarity=0.179 Sum_probs=81.6
Q ss_pred CCCceEEEEEEc--CCCCEEEEEEecCCCCCCCccEEEEEcCCccc----cccCC---------CchhHHHHHHHHhhCC
Q 040187 53 KNGVTSFDVSVD--ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFA----ILAAN---------SKVYDDACRRLAVEVP 117 (299)
Q Consensus 53 ~~~~~~~~~~~~--~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~----~g~~~---------~~~~~~~~~~la~~~g 117 (299)
..+.+.+.+.+. ++..+++.++.|++.+ ++.|+||++||-|.. .|... ......++..|| ++|
T Consensus 83 rdGY~~EKv~f~~~p~~~vpaylLvPd~~~-~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LA-k~G 160 (390)
T PF12715_consen 83 RDGYTREKVEFNTTPGSRVPAYLLVPDGAK-GPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLA-KRG 160 (390)
T ss_dssp ETTEEEEEEEE--STTB-EEEEEEEETT---S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHH-TTT
T ss_pred cCCeEEEEEEEEccCCeeEEEEEEecCCCC-CCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHH-hCC
Confidence 346677777776 5667888888999852 789999999994421 11100 000123577887 889
Q ss_pred cEEEeecCCCCCCCCC----------C-----------------chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEe
Q 040187 118 AVVISVNYRRSPEHRC----------P-----------------SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAG 170 (299)
Q Consensus 118 ~~v~~~dyr~~~~~~~----------~-----------------~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G 170 (299)
|+|+++|-.+.+|..- . ...-|...+++||..... +|++||+++|
T Consensus 161 YVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpe--------VD~~RIG~~G 232 (390)
T PF12715_consen 161 YVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPE--------VDPDRIGCMG 232 (390)
T ss_dssp SEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TT--------EEEEEEEEEE
T ss_pred CEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcc--------cCccceEEEe
Confidence 9999999876543210 0 011255668899988775 8999999999
Q ss_pred cChhHHHHHHHHHHhccCCCCCCccceEEEec
Q 040187 171 DSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQ 202 (299)
Q Consensus 171 ~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~ 202 (299)
+|+||..++.++.. . ++|++.|..+
T Consensus 233 fSmGg~~a~~LaAL------D-dRIka~v~~~ 257 (390)
T PF12715_consen 233 FSMGGYRAWWLAAL------D-DRIKATVANG 257 (390)
T ss_dssp EGGGHHHHHHHHHH--------TT--EEEEES
T ss_pred ecccHHHHHHHHHc------c-hhhHhHhhhh
Confidence 99999999999885 2 3677776543
No 82
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.23 E-value=2.9e-10 Score=89.53 Aligned_cols=177 Identities=14% Similarity=0.174 Sum_probs=119.6
Q ss_pred cEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCC-CCCC---------------CCCCchhHHHHHHHHHHH
Q 040187 85 PVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYR-RSPE---------------HRCPSQYEDGIDALKFID 148 (299)
Q Consensus 85 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr-~~~~---------------~~~~~~~~D~~~a~~~l~ 148 (299)
-+||.|-- +.|.... -.+..+.++| ..||.|+.|||- +-|. +..+....|+...++||.
T Consensus 40 ~~li~i~D---vfG~~~~-n~r~~Adk~A-~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk 114 (242)
T KOG3043|consen 40 KVLIVIQD---VFGFQFP-NTREGADKVA-LNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLK 114 (242)
T ss_pred eEEEEEEe---eeccccH-HHHHHHHHHh-cCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHH
Confidence 56666665 2233221 1356677777 669999999965 4222 223455689999999999
Q ss_pred hhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChHHHhhcCCCCcchhhH
Q 040187 149 SSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTESEMRFQRDPLVGLKLT 228 (299)
Q Consensus 149 ~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (299)
.+. +..+|+++|+++||..+..+... . ..+.++++++|.+-.. ........|+
T Consensus 115 ~~g----------~~kkIGv~GfCwGak~vv~~~~~------~-~~f~a~v~~hps~~d~----~D~~~vk~Pi------ 167 (242)
T KOG3043|consen 115 NHG----------DSKKIGVVGFCWGAKVVVTLSAK------D-PEFDAGVSFHPSFVDS----ADIANVKAPI------ 167 (242)
T ss_pred HcC----------CcceeeEEEEeecceEEEEeecc------c-hhheeeeEecCCcCCh----hHHhcCCCCE------
Confidence 665 67999999999999988777654 2 2789999999976422 1222233455
Q ss_pred HHHHHHcCCCCCCCCcHHH--HHHHHHHHHCC-CcEEEEEeCCCceEEEe--c-CCc----hHHHHHHHHHHHHHHhhhc
Q 040187 229 DWMWKAFLPEGSNRDHPAA--NRYYEGLKKCG-KDAYLIEYPNAVHCFYL--F-PEV----LECSLFLKEVKDFICSQAA 298 (299)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~g-~~~~~~~~~g~~H~f~~--~-~~~----~~~~~~~~~i~~fl~~~~~ 298 (299)
+++....|...|.. ..+.++|++.. ...++.+|+|..|+|.. . ... ...+++.+.+++|+++++.
T Consensus 168 -----lfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y~~ 242 (242)
T KOG3043|consen 168 -----LFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHYLA 242 (242)
T ss_pred -----EEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHhhC
Confidence 34444445554433 37778887764 34689999999999985 1 111 4578889999999998763
No 83
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.21 E-value=8.6e-10 Score=92.52 Aligned_cols=95 Identities=20% Similarity=0.195 Sum_probs=66.5
Q ss_pred cEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 040187 85 PVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADIK 164 (299)
Q Consensus 85 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~ 164 (299)
|.||++||.| ++. ..+..+...|. ..|.|+.+|+|+.+.+..+... +..+..+.+.+. ..+
T Consensus 14 ~~ivllHG~~---~~~--~~w~~~~~~L~--~~~~vi~~Dl~G~G~S~~~~~~-~~~~~~~~l~~~-----------~~~ 74 (256)
T PRK10349 14 VHLVLLHGWG---LNA--EVWRCIDEELS--SHFTLHLVDLPGFGRSRGFGAL-SLADMAEAVLQQ-----------APD 74 (256)
T ss_pred CeEEEECCCC---CCh--hHHHHHHHHHh--cCCEEEEecCCCCCCCCCCCCC-CHHHHHHHHHhc-----------CCC
Confidence 5699999954 232 23567777775 3599999999988765433211 222233334332 247
Q ss_pred cEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 165 QCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 165 ~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
++.++|||+||.+|+.+|.+ .+..++++|++++.
T Consensus 75 ~~~lvGhS~Gg~ia~~~a~~------~p~~v~~lili~~~ 108 (256)
T PRK10349 75 KAIWLGWSLGGLVASQIALT------HPERVQALVTVASS 108 (256)
T ss_pred CeEEEEECHHHHHHHHHHHh------ChHhhheEEEecCc
Confidence 89999999999999999987 56689999998763
No 84
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.19 E-value=2.7e-10 Score=96.36 Aligned_cols=108 Identities=17% Similarity=0.176 Sum_probs=74.9
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCch-------hHHHHHHHHHHHhhcCCC
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQ-------YEDGIDALKFIDSSFIDI 154 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~-------~~D~~~a~~~l~~~~~~~ 154 (299)
.+.|++|++||-+ ++........+...+....++.|+++|++......++.. .+++...+++|.+..
T Consensus 34 ~~~p~vilIHG~~---~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~--- 107 (275)
T cd00707 34 PSRPTRFIIHGWT---SSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNT--- 107 (275)
T ss_pred CCCCcEEEEcCCC---CCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhc---
Confidence 3568999999932 233222234455555545689999999997643333322 245566677776643
Q ss_pred CCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 155 QNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 155 ~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
+.+.++|.++|||+||++|..++.+. +.+++.++++.|...
T Consensus 108 -----g~~~~~i~lIGhSlGa~vAg~~a~~~------~~~v~~iv~LDPa~p 148 (275)
T cd00707 108 -----GLSLENVHLIGHSLGAHVAGFAGKRL------NGKLGRITGLDPAGP 148 (275)
T ss_pred -----CCChHHEEEEEecHHHHHHHHHHHHh------cCccceeEEecCCcc
Confidence 25678999999999999999999874 347899999988643
No 85
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.19 E-value=4.1e-10 Score=91.57 Aligned_cols=97 Identities=27% Similarity=0.349 Sum_probs=71.8
Q ss_pred EEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC-----chhHHHHHHHHHHHhhcCCCCCCCCCC
Q 040187 87 IVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP-----SQYEDGIDALKFIDSSFIDIQNFPACA 161 (299)
Q Consensus 87 vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~-----~~~~D~~~a~~~l~~~~~~~~~~~~~~ 161 (299)
||++||.+. +. ..+..++..++ .|+.|+++|+|+.+....+ ..+++..+.+..+.+..
T Consensus 1 vv~~hG~~~---~~--~~~~~~~~~l~--~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~---------- 63 (228)
T PF12697_consen 1 VVFLHGFGG---SS--ESWDPLAEALA--RGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDAL---------- 63 (228)
T ss_dssp EEEE-STTT---TG--GGGHHHHHHHH--TTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHT----------
T ss_pred eEEECCCCC---CH--HHHHHHHHHHh--CCCEEEEEecCCccccccccccCCcchhhhhhhhhhccccc----------
Confidence 789999652 32 34778888884 5999999999987665432 23455555555555543
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 162 DIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 162 d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
..++++++|||+||.+++.++.+ .+..++++|+++|...
T Consensus 64 ~~~~~~lvG~S~Gg~~a~~~a~~------~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 64 GIKKVILVGHSMGGMIALRLAAR------YPDRVKGLVLLSPPPP 102 (228)
T ss_dssp TTSSEEEEEETHHHHHHHHHHHH------SGGGEEEEEEESESSS
T ss_pred ccccccccccccccccccccccc------cccccccceeeccccc
Confidence 23789999999999999999988 5568999999999875
No 86
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.18 E-value=1.7e-10 Score=97.80 Aligned_cols=124 Identities=19% Similarity=0.165 Sum_probs=88.0
Q ss_pred CCCCEEEEEEec--CCCCCCCccEEEEEcCCccccccCCCchhHHH--------HHHHHhhCCcEEEeecCCCCCCCC--
Q 040187 65 ATRDLWFRLYSP--TNTTATNLPVIVYFHGGGFAILAANSKVYDDA--------CRRLAVEVPAVVISVNYRRSPEHR-- 132 (299)
Q Consensus 65 ~~~~i~~~i~~P--~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~--------~~~la~~~g~~v~~~dyr~~~~~~-- 132 (299)
||..|.+++|+| ... ++.|+||..|+-|. +......... ...++ ++||+||.+|.|+...+.
T Consensus 1 DGv~L~adv~~P~~~~~--~~~P~il~~tpY~~---~~~~~~~~~~~~~~~~~~~~~~~-~~GY~vV~~D~RG~g~S~G~ 74 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGG--GPFPVILTRTPYGK---GDQTASDLAGANPGPPSARRPFA-ERGYAVVVQDVRGTGGSEGE 74 (272)
T ss_dssp TS-EEEEEEEEE--TTS--SSEEEEEEEESSTC---TC-HHHHHHTTCHHSHGGGHHHH-HTT-EEEEEE-TTSTTS-S-
T ss_pred CCCEEEEEEEecCCCCC--CcccEEEEccCcCC---CCCcccchhhhhcccchhHHHHH-hCCCEEEEECCcccccCCCc
Confidence 467789999999 433 78999999999442 1100000000 01255 889999999999864431
Q ss_pred ----CCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCC
Q 040187 133 ----CPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 133 ----~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 208 (299)
.+...+|..++++|+.++. .+..+|+++|.|.+|..++.+|.. .++.+++++...+..+..
T Consensus 75 ~~~~~~~e~~D~~d~I~W~~~Qp---------ws~G~VGm~G~SY~G~~q~~~A~~------~~p~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 75 FDPMSPNEAQDGYDTIEWIAAQP---------WSNGKVGMYGISYGGFTQWAAAAR------RPPHLKAIVPQSGWSDLY 139 (272)
T ss_dssp B-TTSHHHHHHHHHHHHHHHHCT---------TEEEEEEEEEETHHHHHHHHHHTT------T-TTEEEEEEESE-SBTC
T ss_pred cccCChhHHHHHHHHHHHHHhCC---------CCCCeEEeeccCHHHHHHHHHHhc------CCCCceEEEecccCCccc
Confidence 4457799999999999975 366799999999999999999986 667899999998877655
Q ss_pred C
Q 040187 209 E 209 (299)
Q Consensus 209 ~ 209 (299)
.
T Consensus 140 ~ 140 (272)
T PF02129_consen 140 R 140 (272)
T ss_dssp C
T ss_pred c
Confidence 4
No 87
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.18 E-value=1.2e-09 Score=91.48 Aligned_cols=112 Identities=21% Similarity=0.231 Sum_probs=81.5
Q ss_pred eEEEEEEcCCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCC--C
Q 040187 57 TSFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRC--P 134 (299)
Q Consensus 57 ~~~~~~~~~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~--~ 134 (299)
..+.+..++++-+.+++..+... .+.|.||.+|| +.|+..+...+.+++.+. +.|+.||++++|++....- |
T Consensus 50 ~re~v~~pdg~~~~ldw~~~p~~--~~~P~vVl~HG---L~G~s~s~y~r~L~~~~~-~rg~~~Vv~~~Rgcs~~~n~~p 123 (345)
T COG0429 50 TRERLETPDGGFIDLDWSEDPRA--AKKPLVVLFHG---LEGSSNSPYARGLMRALS-RRGWLVVVFHFRGCSGEANTSP 123 (345)
T ss_pred ceEEEEcCCCCEEEEeeccCccc--cCCceEEEEec---cCCCCcCHHHHHHHHHHH-hcCCeEEEEecccccCCcccCc
Confidence 34556667788787877764332 46799999999 445555554455666665 8899999999998754321 2
Q ss_pred -----chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhH-HHHHHHHHH
Q 040187 135 -----SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGG-NLAHNVAVL 184 (299)
Q Consensus 135 -----~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG-~lA~~~a~~ 184 (299)
...+|+...++|++... .+.++..+|.|+|| .+|..++.+
T Consensus 124 ~~yh~G~t~D~~~~l~~l~~~~----------~~r~~~avG~SLGgnmLa~ylgee 169 (345)
T COG0429 124 RLYHSGETEDIRFFLDWLKARF----------PPRPLYAVGFSLGGNMLANYLGEE 169 (345)
T ss_pred ceecccchhHHHHHHHHHHHhC----------CCCceEEEEecccHHHHHHHHHhh
Confidence 34589999999998865 46889999999999 455555554
No 88
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.17 E-value=4.8e-10 Score=94.99 Aligned_cols=103 Identities=14% Similarity=0.109 Sum_probs=71.0
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCC----CchhHHHHHHHHHHHhhcCCCCCC
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRC----PSQYEDGIDALKFIDSSFIDIQNF 157 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~----~~~~~D~~~a~~~l~~~~~~~~~~ 157 (299)
++.|.||++||.+. +. ..|..+...|. +.||.|+++|+++.+...- ...++|..+.+.-+.+...
T Consensus 16 ~~~p~vvliHG~~~---~~--~~w~~~~~~L~-~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~----- 84 (273)
T PLN02211 16 RQPPHFVLIHGISG---GS--WCWYKIRCLME-NSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLP----- 84 (273)
T ss_pred CCCCeEEEECCCCC---Cc--CcHHHHHHHHH-hCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcC-----
Confidence 35689999999552 22 23677777775 6799999999998764321 1344444443333333321
Q ss_pred CCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 158 PACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 158 ~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
..++++++|||+||.++..++.+ .+..++++|++++..
T Consensus 85 ----~~~~v~lvGhS~GG~v~~~~a~~------~p~~v~~lv~~~~~~ 122 (273)
T PLN02211 85 ----ENEKVILVGHSAGGLSVTQAIHR------FPKKICLAVYVAATM 122 (273)
T ss_pred ----CCCCEEEEEECchHHHHHHHHHh------ChhheeEEEEecccc
Confidence 24789999999999999999876 445788999987753
No 89
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.17 E-value=3.9e-09 Score=93.25 Aligned_cols=101 Identities=14% Similarity=0.117 Sum_probs=72.7
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC-------chhHHHHHHHHHHHhhcCCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP-------SQYEDGIDALKFIDSSFIDIQ 155 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~-------~~~~D~~~a~~~l~~~~~~~~ 155 (299)
..|.||++||.+. ....++.++..|+ + ++.|+++|+++.+.+..+ ..+++..+.+..+.+..
T Consensus 126 ~~~~ivllHG~~~-----~~~~w~~~~~~L~-~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l---- 194 (383)
T PLN03084 126 NNPPVLLIHGFPS-----QAYSYRKVLPVLS-K-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDEL---- 194 (383)
T ss_pred CCCeEEEECCCCC-----CHHHHHHHHHHHh-c-CCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHh----
Confidence 4589999999542 2234677777775 3 799999999987654322 23455555444444433
Q ss_pred CCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 156 NFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 156 ~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
..+++.|+|+|+||.+|+.++.+ .+.+++++|+++|...
T Consensus 195 ------~~~~~~LvG~s~GG~ia~~~a~~------~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 195 ------KSDKVSLVVQGYFSPPVVKYASA------HPDKIKKLILLNPPLT 233 (383)
T ss_pred ------CCCCceEEEECHHHHHHHHHHHh------ChHhhcEEEEECCCCc
Confidence 34679999999999999999987 5668999999998653
No 90
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.17 E-value=8.2e-09 Score=89.46 Aligned_cols=133 Identities=14% Similarity=0.118 Sum_probs=95.7
Q ss_pred CceEEEEEEcCCCCEEEEEEecCCCC----CCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCC
Q 040187 55 GVTSFDVSVDATRDLWFRLYSPTNTT----ATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPE 130 (299)
Q Consensus 55 ~~~~~~~~~~~~~~i~~~i~~P~~~~----~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~ 130 (299)
....+-++.+||+.+.++++.+.... ++..|+||++|| +.|+........++ ..|.+.||.|++++.|+.+.
T Consensus 92 ~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpG---ltg~S~~~YVr~lv-~~a~~~G~r~VVfN~RG~~g 167 (409)
T KOG1838|consen 92 EYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPG---LTGGSHESYVRHLV-HEAQRKGYRVVVFNHRGLGG 167 (409)
T ss_pred cceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecC---CCCCChhHHHHHHH-HHHHhCCcEEEEECCCCCCC
Confidence 44556677889999999999765431 246799999999 32333333233344 34458999999999999765
Q ss_pred CCCC-------chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecc
Q 040187 131 HRCP-------SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQP 203 (299)
Q Consensus 131 ~~~~-------~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p 203 (299)
.... ...+|+..+++++.+.. ...+++.+|+|+||++-.....+..++ .+..+|+++-+|
T Consensus 168 ~~LtTpr~f~ag~t~Dl~~~v~~i~~~~----------P~a~l~avG~S~Gg~iL~nYLGE~g~~---~~l~~a~~v~~P 234 (409)
T KOG1838|consen 168 SKLTTPRLFTAGWTEDLREVVNHIKKRY----------PQAPLFAVGFSMGGNILTNYLGEEGDN---TPLIAAVAVCNP 234 (409)
T ss_pred CccCCCceeecCCHHHHHHHHHHHHHhC----------CCCceEEEEecchHHHHHHHhhhccCC---CCceeEEEEecc
Confidence 5432 34699999999999876 346899999999999998888776543 234566666666
Q ss_pred c
Q 040187 204 F 204 (299)
Q Consensus 204 ~ 204 (299)
|
T Consensus 235 w 235 (409)
T KOG1838|consen 235 W 235 (409)
T ss_pred c
Confidence 5
No 91
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.16 E-value=1.2e-10 Score=102.41 Aligned_cols=190 Identities=17% Similarity=0.173 Sum_probs=96.3
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCC-CC------------CC-------------CC-
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRS-PE------------HR-------------CP- 134 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~-~~------------~~-------------~~- 134 (299)
++.|+|||-||-| |++.. |..+|..|| .+||+|+++++|-. .- .. +.
T Consensus 98 ~~~PvvIFSHGlg---g~R~~--yS~~~~eLA-S~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (379)
T PF03403_consen 98 GKFPVVIFSHGLG---GSRTS--YSAICGELA-SHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRD 171 (379)
T ss_dssp S-EEEEEEE--TT-----TTT--THHHHHHHH-HTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE---
T ss_pred CCCCEEEEeCCCC---cchhh--HHHHHHHHH-hCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceecccc
Confidence 5799999999943 45544 789999999 77999999999831 00 00 00
Q ss_pred ---------------chhHHHHHHHHHHHhhcC------------CCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhcc
Q 040187 135 ---------------SQYEDGIDALKFIDSSFI------------DIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADG 187 (299)
Q Consensus 135 ---------------~~~~D~~~a~~~l~~~~~------------~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~ 187 (299)
.-..|+..+++.|.+... +...++..+|.++|+++|||.||..|+.++...
T Consensus 172 ~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-- 249 (379)
T PF03403_consen 172 FDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-- 249 (379)
T ss_dssp --GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH---
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc--
Confidence 012466667776654211 011234567899999999999999999887752
Q ss_pred CCCCCCccceEEEecccCCCCCCChHHHhhcCCCCcchhhHHHHHHHcCCCCCCCCcHHHHHHHHHHHHCCCcEEEEEeC
Q 040187 188 CNFSRLRLNGLIAIQPFFGGEERTESEMRFQRDPLVGLKLTDWMWKAFLPEGSNRDHPAANRYYEGLKKCGKDAYLIEYP 267 (299)
Q Consensus 188 ~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 267 (299)
.+++++|++.||+..-. .+.. ..-..|++... ......+......+++...+....+..+.
T Consensus 250 -----~r~~~~I~LD~W~~Pl~-~~~~-~~i~~P~L~In------------Se~f~~~~~~~~~~~~~~~~~~~~~~ti~ 310 (379)
T PF03403_consen 250 -----TRFKAGILLDPWMFPLG-DEIY-SKIPQPLLFIN------------SESFQWWENIFRMKKVISNNKESRMLTIK 310 (379)
T ss_dssp -----TT--EEEEES---TTS--GGGG-GG--S-EEEEE------------ETTT--HHHHHHHHTT--TTS-EEEEEET
T ss_pred -----cCcceEEEeCCcccCCC-cccc-cCCCCCEEEEE------------CcccCChhhHHHHHHHhccCCCcEEEEEC
Confidence 47999999999975321 1111 11123332111 11111111111112233345567888899
Q ss_pred CCceEEEecC----C---------------chHHHHHHHHHHHHHHhhhc
Q 040187 268 NAVHCFYLFP----E---------------VLECSLFLKEVKDFICSQAA 298 (299)
Q Consensus 268 g~~H~f~~~~----~---------------~~~~~~~~~~i~~fl~~~~~ 298 (299)
|..|.-+..- + ....+...+.+++||+++++
T Consensus 311 gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~ 360 (379)
T PF03403_consen 311 GTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLG 360 (379)
T ss_dssp T--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcC
Confidence 9999543321 1 01244556778899999875
No 92
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.16 E-value=2.5e-08 Score=83.70 Aligned_cols=125 Identities=17% Similarity=0.262 Sum_probs=85.7
Q ss_pred CCCceEEEEEEcCCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC
Q 040187 53 KNGVTSFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR 132 (299)
Q Consensus 53 ~~~~~~~~~~~~~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~ 132 (299)
..++..+-++++ +|.+.+. .... +..|+|+++||- ...+..++.....++ ..||.|+++|.|+.+...
T Consensus 19 ~~~~~hk~~~~~---gI~~h~~--e~g~-~~gP~illlHGf-----Pe~wyswr~q~~~la-~~~~rviA~DlrGyG~Sd 86 (322)
T KOG4178|consen 19 LSAISHKFVTYK---GIRLHYV--EGGP-GDGPIVLLLHGF-----PESWYSWRHQIPGLA-SRGYRVIAPDLRGYGFSD 86 (322)
T ss_pred hhhcceeeEEEc---cEEEEEE--eecC-CCCCEEEEEccC-----Cccchhhhhhhhhhh-hcceEEEecCCCCCCCCC
Confidence 456677777777 3554433 2222 467999999992 334444567778887 778999999999976655
Q ss_pred CCch-----hHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 133 CPSQ-----YEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 133 ~~~~-----~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
-|.. +.-...-+..+.++. .-++++++||++||.+|..+|.. .+.+++++|+++..+
T Consensus 87 ~P~~~~~Yt~~~l~~di~~lld~L----------g~~k~~lvgHDwGaivaw~la~~------~Perv~~lv~~nv~~ 148 (322)
T KOG4178|consen 87 APPHISEYTIDELVGDIVALLDHL----------GLKKAFLVGHDWGAIVAWRLALF------YPERVDGLVTLNVPF 148 (322)
T ss_pred CCCCcceeeHHHHHHHHHHHHHHh----------ccceeEEEeccchhHHHHHHHHh------ChhhcceEEEecCCC
Confidence 4432 222333333333332 25889999999999999999998 666889998876543
No 93
>PRK06489 hypothetical protein; Provisional
Probab=99.14 E-value=1.3e-09 Score=96.21 Aligned_cols=102 Identities=17% Similarity=0.184 Sum_probs=66.2
Q ss_pred ccEEEEEcCCccccccCCCchhHHHHHHHH------hhCCcEEEeecCCCCCCCCCC----------chhHHHHHH-HHH
Q 040187 84 LPVIVYFHGGGFAILAANSKVYDDACRRLA------VEVPAVVISVNYRRSPEHRCP----------SQYEDGIDA-LKF 146 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~~~~~~~~~~~la------~~~g~~v~~~dyr~~~~~~~~----------~~~~D~~~a-~~~ 146 (299)
.|.||++||++. +...+....+...+. ...+|.|+++|+|+.+.+..+ ..++|..+. +.+
T Consensus 69 gpplvllHG~~~---~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~ 145 (360)
T PRK06489 69 DNAVLVLHGTGG---SGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRL 145 (360)
T ss_pred CCeEEEeCCCCC---chhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHH
Confidence 588999999652 322210012333331 135799999999987655432 134555433 344
Q ss_pred HHhhcCCCCCCCCCCCCCcEE-EEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 147 IDSSFIDIQNFPACADIKQCF-LAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 147 l~~~~~~~~~~~~~~d~~~i~-l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
+.+.. +.+++. ++||||||.+|+.++.+ .+.+++++|++++.
T Consensus 146 l~~~l----------gi~~~~~lvG~SmGG~vAl~~A~~------~P~~V~~LVLi~s~ 188 (360)
T PRK06489 146 VTEGL----------GVKHLRLILGTSMGGMHAWMWGEK------YPDFMDALMPMASQ 188 (360)
T ss_pred HHHhc----------CCCceeEEEEECHHHHHHHHHHHh------CchhhheeeeeccC
Confidence 44433 345664 89999999999999998 66789999998764
No 94
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.13 E-value=7.3e-09 Score=106.70 Aligned_cols=99 Identities=17% Similarity=0.133 Sum_probs=71.1
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC-----------chhHHHHHHHHHHHhhc
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP-----------SQYEDGIDALKFIDSSF 151 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~-----------~~~~D~~~a~~~l~~~~ 151 (299)
..|+||++||.+ ++.. .+..++..|+ .++.|+.+|+|+.+....+ ..+++..+.+.-+.+..
T Consensus 1370 ~~~~vVllHG~~---~s~~--~w~~~~~~L~--~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l 1442 (1655)
T PLN02980 1370 EGSVVLFLHGFL---GTGE--DWIPIMKAIS--GSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHI 1442 (1655)
T ss_pred CCCeEEEECCCC---CCHH--HHHHHHHHHh--CCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHh
Confidence 468999999955 2332 3567777775 3699999999987655322 23455555444444433
Q ss_pred CCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 152 IDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 152 ~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
..+++.|+||||||.+|+.++.+ .+..++++|++++.
T Consensus 1443 ----------~~~~v~LvGhSmGG~iAl~~A~~------~P~~V~~lVlis~~ 1479 (1655)
T PLN02980 1443 ----------TPGKVTLVGYSMGARIALYMALR------FSDKIEGAVIISGS 1479 (1655)
T ss_pred ----------CCCCEEEEEECHHHHHHHHHHHh------ChHhhCEEEEECCC
Confidence 35789999999999999999987 55679999998764
No 95
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=99.13 E-value=2.1e-09 Score=97.10 Aligned_cols=200 Identities=18% Similarity=0.117 Sum_probs=132.9
Q ss_pred CCCceEEEEEEc--CCCCEEEEEEecCC-CCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCC
Q 040187 53 KNGVTSFDVSVD--ATRDLWFRLYSPTN-TTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSP 129 (299)
Q Consensus 53 ~~~~~~~~~~~~--~~~~i~~~i~~P~~-~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~ 129 (299)
+.....+.+... ++..+++.++.-+. ..+++.|+++|-.|.. |......+....-.|. ++|++.....-|+.+
T Consensus 414 p~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaY---G~s~~p~Fs~~~lSLl-DRGfiyAIAHVRGGg 489 (682)
T COG1770 414 PEDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAY---GISMDPSFSIARLSLL-DRGFVYAIAHVRGGG 489 (682)
T ss_pred hhHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccc---cccCCcCcccceeeee-cCceEEEEEEeeccc
Confidence 455666666665 66778888765443 2346889999999954 3333333555455555 889999999999887
Q ss_pred CCCCC-----------chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceE
Q 040187 130 EHRCP-----------SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGL 198 (299)
Q Consensus 130 ~~~~~-----------~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~ 198 (299)
+.... ..++|..++.++|.+... .++++|+++|.||||.|+..++.. .|..++|+
T Consensus 490 elG~~WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~--------~~~~~i~a~GGSAGGmLmGav~N~------~P~lf~~i 555 (682)
T COG1770 490 ELGRAWYEDGKLLNKKNTFTDFIAAARHLVKEGY--------TSPDRIVAIGGSAGGMLMGAVANM------APDLFAGI 555 (682)
T ss_pred ccChHHHHhhhhhhccccHHHHHHHHHHHHHcCc--------CCccceEEeccCchhHHHHHHHhh------Chhhhhhe
Confidence 65432 457899999999999875 688999999999999999999988 67789999
Q ss_pred EEecccCCCCCCC--------hHHHhhcCCCCcchhhHHHHHHHcCCCCCCCC--cH-----------HH-----HHHHH
Q 040187 199 IAIQPFFGGEERT--------ESEMRFQRDPLVGLKLTDWMWKAFLPEGSNRD--HP-----------AA-----NRYYE 252 (299)
Q Consensus 199 i~~~p~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----------~~-----~~~~~ 252 (299)
|+..|++|.-... ..+..-.+.|. ......+.+.|.|-.+-.. .| .+ .++..
T Consensus 556 iA~VPFVDvltTMlD~slPLT~~E~~EWGNP~--d~e~y~yikSYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvA 633 (682)
T COG1770 556 IAQVPFVDVLTTMLDPSLPLTVTEWDEWGNPL--DPEYYDYIKSYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVA 633 (682)
T ss_pred eecCCccchhhhhcCCCCCCCccchhhhCCcC--CHHHHHHHhhcCchhccccCCCCceEEEccccCCccccchHHHHHH
Confidence 9999998743211 01111112333 2233444555555332211 11 11 18999
Q ss_pred HHHHCCC---cEEEEEeCCCceE
Q 040187 253 GLKKCGK---DAYLIEYPNAVHC 272 (299)
Q Consensus 253 ~l~~~g~---~~~~~~~~g~~H~ 272 (299)
+|++.+. ++-+..=..++|+
T Consensus 634 kLR~~~td~~plLlkt~M~aGHg 656 (682)
T COG1770 634 KLRELKTDGNPLLLKTNMDAGHG 656 (682)
T ss_pred HHhhcccCCCcEEEEecccccCC
Confidence 9988764 3455555678895
No 96
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.10 E-value=3.8e-09 Score=88.49 Aligned_cols=100 Identities=19% Similarity=0.239 Sum_probs=73.0
Q ss_pred EEEEEE-ecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC------CCchhHHHH
Q 040187 69 LWFRLY-SPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR------CPSQYEDGI 141 (299)
Q Consensus 69 i~~~i~-~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~------~~~~~~D~~ 141 (299)
+.++++ ...+. .+.|.++++|| ..|+... +..+.+.|+...+..|+++|-|..+..+ +..+.+|+.
T Consensus 38 l~y~~~~~~~~~--~~~Pp~i~lHG---l~GS~~N--w~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~ 110 (315)
T KOG2382|consen 38 LAYDSVYSSENL--ERAPPAIILHG---LLGSKEN--WRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVK 110 (315)
T ss_pred cceeeeeccccc--CCCCceEEecc---cccCCCC--HHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHH
Confidence 444444 34333 57799999999 6677765 6899999999999999999999654333 334557777
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhH-HHHHHHHHHh
Q 040187 142 DALKFIDSSFIDIQNFPACADIKQCFLAGDSAGG-NLAHNVAVLA 185 (299)
Q Consensus 142 ~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG-~lA~~~a~~~ 185 (299)
..+++..... ...++.+.|||||| .+++..+.+.
T Consensus 111 ~Fi~~v~~~~----------~~~~~~l~GHsmGG~~~~m~~t~~~ 145 (315)
T KOG2382|consen 111 LFIDGVGGST----------RLDPVVLLGHSMGGVKVAMAETLKK 145 (315)
T ss_pred HHHHHccccc----------ccCCceecccCcchHHHHHHHHHhc
Confidence 7777765432 34679999999999 7777777763
No 97
>PLN02578 hydrolase
Probab=99.09 E-value=1.6e-08 Score=89.09 Aligned_cols=97 Identities=19% Similarity=0.080 Sum_probs=65.8
Q ss_pred ccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCc---hhHH-HHHHHHHHHhhcCCCCCCCC
Q 040187 84 LPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPS---QYED-GIDALKFIDSSFIDIQNFPA 159 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~---~~~D-~~~a~~~l~~~~~~~~~~~~ 159 (299)
.|.||++||.| ++ ...+...+..|+ .+|.|+++|+++.+.+..+. ..++ ..++.+++.+.
T Consensus 86 g~~vvliHG~~---~~--~~~w~~~~~~l~--~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~--------- 149 (354)
T PLN02578 86 GLPIVLIHGFG---AS--AFHWRYNIPELA--KKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEV--------- 149 (354)
T ss_pred CCeEEEECCCC---CC--HHHHHHHHHHHh--cCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHh---------
Confidence 35689999944 22 223455667775 36999999999876654331 2222 22333344332
Q ss_pred CCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 160 CADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 160 ~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
..++++++|||+||.+|+.+|.+ .+..++++|++++.
T Consensus 150 --~~~~~~lvG~S~Gg~ia~~~A~~------~p~~v~~lvLv~~~ 186 (354)
T PLN02578 150 --VKEPAVLVGNSLGGFTALSTAVG------YPELVAGVALLNSA 186 (354)
T ss_pred --ccCCeEEEEECHHHHHHHHHHHh------ChHhcceEEEECCC
Confidence 23679999999999999999998 55679999998764
No 98
>PRK07581 hypothetical protein; Validated
Probab=99.09 E-value=5.4e-09 Score=91.49 Aligned_cols=100 Identities=17% Similarity=0.092 Sum_probs=66.0
Q ss_pred CccEEEEEcCCccccccCCCchhHHHH---HHHHhhCCcEEEeecCCCCCCCCCCc---------------hhHHHHHHH
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDAC---RRLAVEVPAVVISVNYRRSPEHRCPS---------------QYEDGIDAL 144 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~---~~la~~~g~~v~~~dyr~~~~~~~~~---------------~~~D~~~a~ 144 (299)
+.|+||++||+++ +... +...+ ..+. ..+|.|+++|+|+.+.+..+. ..+|+.+..
T Consensus 40 ~~~~vll~~~~~~---~~~~--~~~~~~~~~~l~-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (339)
T PRK07581 40 KDNAILYPTWYSG---THQD--NEWLIGPGRALD-PEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQH 113 (339)
T ss_pred CCCEEEEeCCCCC---Cccc--chhhccCCCccC-cCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHH
Confidence 4477887787664 2211 12221 2443 458999999999876554321 124454444
Q ss_pred HHHHhhcCCCCCCCCCCCCCcE-EEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 145 KFIDSSFIDIQNFPACADIKQC-FLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 145 ~~l~~~~~~~~~~~~~~d~~~i-~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
..+.+.. ..+++ .|+|+|+||.+|+.+|.+ ++.+++++|++++.
T Consensus 114 ~~l~~~l----------gi~~~~~lvG~S~GG~va~~~a~~------~P~~V~~Lvli~~~ 158 (339)
T PRK07581 114 RLLTEKF----------GIERLALVVGWSMGAQQTYHWAVR------YPDMVERAAPIAGT 158 (339)
T ss_pred HHHHHHh----------CCCceEEEEEeCHHHHHHHHHHHH------CHHHHhhheeeecC
Confidence 4555543 35684 799999999999999998 66789999988654
No 99
>PLN02872 triacylglycerol lipase
Probab=99.08 E-value=2.9e-09 Score=94.25 Aligned_cols=131 Identities=15% Similarity=0.064 Sum_probs=79.3
Q ss_pred eEEEEEEcCCCCEEEEEEecCCC--CCCCccEEEEEcCCccccccCCCc----hhHHHHHHHHhhCCcEEEeecCCCCCC
Q 040187 57 TSFDVSVDATRDLWFRLYSPTNT--TATNLPVIVYFHGGGFAILAANSK----VYDDACRRLAVEVPAVVISVNYRRSPE 130 (299)
Q Consensus 57 ~~~~~~~~~~~~i~~~i~~P~~~--~~~~~p~vv~~HGGg~~~g~~~~~----~~~~~~~~la~~~g~~v~~~dyr~~~~ 130 (299)
+.+.++-+||.-+.+.-+.+... ...+.|+|+++||.+.. ...+ ....++..|+ +.||.|+.+|.|+...
T Consensus 45 e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~s---s~~w~~~~~~~sla~~La-~~GydV~l~n~RG~~~ 120 (395)
T PLN02872 45 TEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMA---GDAWFLNSPEQSLGFILA-DHGFDVWVGNVRGTRW 120 (395)
T ss_pred eEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCccccc---ccceeecCcccchHHHHH-hCCCCccccccccccc
Confidence 44444445666565554422211 11346889999996421 1111 0133455566 7899999999998532
Q ss_pred C----------------CCCc-hhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCC
Q 040187 131 H----------------RCPS-QYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRL 193 (299)
Q Consensus 131 ~----------------~~~~-~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~ 193 (299)
. .+.. ...|+.++++++.+.. .+++.++|||+||.+++.++. ..+ ...
T Consensus 121 s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~-----------~~~v~~VGhS~Gg~~~~~~~~-~p~---~~~ 185 (395)
T PLN02872 121 SYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT-----------NSKIFIVGHSQGTIMSLAALT-QPN---VVE 185 (395)
T ss_pred ccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc-----------CCceEEEEECHHHHHHHHHhh-ChH---HHH
Confidence 1 0111 2368899999987642 368999999999999985442 211 112
Q ss_pred ccceEEEecccCC
Q 040187 194 RLNGLIAIQPFFG 206 (299)
Q Consensus 194 ~~~~~i~~~p~~~ 206 (299)
.++.+++++|...
T Consensus 186 ~v~~~~~l~P~~~ 198 (395)
T PLN02872 186 MVEAAALLCPISY 198 (395)
T ss_pred HHHHHHHhcchhh
Confidence 5777778887643
No 100
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.07 E-value=3.2e-09 Score=94.24 Aligned_cols=106 Identities=17% Similarity=0.242 Sum_probs=71.9
Q ss_pred CccEEEEEcCCccccccCCCchhH-HHHHHHHhh-CCcEEEeecCCCCCCCCCCch-------hHHHHHHHHHHHhhcCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYD-DACRRLAVE-VPAVVISVNYRRSPEHRCPSQ-------YEDGIDALKFIDSSFID 153 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~-~~~~~la~~-~g~~v~~~dyr~~~~~~~~~~-------~~D~~~a~~~l~~~~~~ 153 (299)
..|++|++||-+ ++.....+. .++..+... ..+.|+++|++......++.. .+++.+.+++|.+..
T Consensus 40 ~~ptvIlIHG~~---~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~-- 114 (442)
T TIGR03230 40 ETKTFIVIHGWT---VTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEF-- 114 (442)
T ss_pred CCCeEEEECCCC---cCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhh--
Confidence 568999999933 122111122 244444322 369999999997665555432 245566677775543
Q ss_pred CCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 154 IQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 154 ~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
+.+.+++.|+|||+||++|..++.+ .+.++..++++.|.-
T Consensus 115 ------gl~l~~VhLIGHSLGAhIAg~ag~~------~p~rV~rItgLDPAg 154 (442)
T TIGR03230 115 ------NYPWDNVHLLGYSLGAHVAGIAGSL------TKHKVNRITGLDPAG 154 (442)
T ss_pred ------CCCCCcEEEEEECHHHHHHHHHHHh------CCcceeEEEEEcCCC
Confidence 2578999999999999999999876 445789999998853
No 101
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=99.07 E-value=2e-09 Score=88.84 Aligned_cols=114 Identities=23% Similarity=0.318 Sum_probs=82.2
Q ss_pred CCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCC---------CC--CC-----------------
Q 040187 81 ATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRS---------PE--HR----------------- 132 (299)
Q Consensus 81 ~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~---------~~--~~----------------- 132 (299)
.++.|++||-||=| |++. .|..+|-.|| .+||+|.++.+|-. +. ..
T Consensus 115 ~~k~PvvvFSHGLg---gsRt--~YSa~c~~LA-ShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ek 188 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLG---GSRT--LYSAYCTSLA-SHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEK 188 (399)
T ss_pred CCCccEEEEecccc---cchh--hHHHHhhhHh-hCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCce
Confidence 46899999999932 3443 3889999998 78999999999821 11 00
Q ss_pred -C-------CchhHHHHHHHHHHHhhcC-------------CCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCC
Q 040187 133 -C-------PSQYEDGIDALKFIDSSFI-------------DIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFS 191 (299)
Q Consensus 133 -~-------~~~~~D~~~a~~~l~~~~~-------------~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~ 191 (299)
+ ..-.++|..|++-|.+-.. +.+.++.++|.++++|+|||.||..++.....
T Consensus 189 ef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~------- 261 (399)
T KOG3847|consen 189 EFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSS------- 261 (399)
T ss_pred eEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhcc-------
Confidence 0 0124688888888765422 12334667889999999999999888777653
Q ss_pred CCccceEEEecccCCC
Q 040187 192 RLRLNGLIAIQPFFGG 207 (299)
Q Consensus 192 ~~~~~~~i~~~p~~~~ 207 (299)
...+++.|++..|+..
T Consensus 262 ~t~FrcaI~lD~WM~P 277 (399)
T KOG3847|consen 262 HTDFRCAIALDAWMFP 277 (399)
T ss_pred ccceeeeeeeeeeecc
Confidence 3479999999988753
No 102
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.04 E-value=9.2e-09 Score=80.62 Aligned_cols=130 Identities=18% Similarity=0.131 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChHHHhh
Q 040187 138 EDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTESEMRF 217 (299)
Q Consensus 138 ~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~ 217 (299)
..+.+.+.++.++.. +.+++.+||++.|+|+||.+|+..+..+ +..+.++..+++++......... .
T Consensus 72 ~~aa~~i~~Li~~e~-----~~Gi~~~rI~igGfs~G~a~aL~~~~~~------~~~l~G~~~~s~~~p~~~~~~~~-~- 138 (206)
T KOG2112|consen 72 HRAADNIANLIDNEP-----ANGIPSNRIGIGGFSQGGALALYSALTY------PKALGGIFALSGFLPRASIGLPG-W- 138 (206)
T ss_pred HHHHHHHHHHHHHHH-----HcCCCccceeEcccCchHHHHHHHHhcc------ccccceeeccccccccchhhccC-C-
Confidence 445556677766653 7789999999999999999999999974 33678888888876421111000 0
Q ss_pred cCCCCcchhhHHHHHHHcCCCCCCCCcHHHH--HHHHHHHHCCCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHHh
Q 040187 218 QRDPLVGLKLTDWMWKAFLPEGSNRDHPAAN--RYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICS 295 (299)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~ 295 (299)
.+... ...-...++..|..+|..- +..+.|+..+..++++-|+|..| .-..+-++++..|+++
T Consensus 139 --~~~~~-----~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h--------~~~~~e~~~~~~~~~~ 203 (206)
T KOG2112|consen 139 --LPGVN-----YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGH--------STSPQELDDLKSWIKT 203 (206)
T ss_pred --ccccC-----cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCccc--------cccHHHHHHHHHHHHH
Confidence 00000 0011233344454455433 77788999999999999999999 3456788999999987
No 103
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=99.03 E-value=3.6e-09 Score=87.61 Aligned_cols=202 Identities=17% Similarity=0.202 Sum_probs=116.4
Q ss_pred ceEEEEEEc--CCCCEEEEEEecCCC-CCCCccEEEEEcCCccccccCCCchhHHHHHHHHhh---CCcEEEeecCCCC-
Q 040187 56 VTSFDVSVD--ATRDLWFRLYSPTNT-TATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVE---VPAVVISVNYRRS- 128 (299)
Q Consensus 56 ~~~~~~~~~--~~~~i~~~i~~P~~~-~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~---~g~~v~~~dyr~~- 128 (299)
...+++.+. -..+...-+|.|.+. ...+.|+++++||=-|..-.. ....+..+..+ ...+++.+||--.
T Consensus 67 ~~~~~~~~~~~l~~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~----i~~~~dsli~~g~i~pai~vgid~~d~~ 142 (299)
T COG2382 67 GPVEEILYSSELLSERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGR----IPRILDSLIAAGEIPPAILVGIDYIDVK 142 (299)
T ss_pred CchhhhhhhhhhccceeEEEEeCCCCCccccccEEEEeccHHHHhcCC----hHHHHHHHHHcCCCCCceEEecCCCCHH
Confidence 344555555 225666777888776 347899999999965532221 22333344322 3577888888631
Q ss_pred ---CCCCCC-chhHHH-HHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecc
Q 040187 129 ---PEHRCP-SQYEDG-IDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQP 203 (299)
Q Consensus 129 ---~~~~~~-~~~~D~-~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p 203 (299)
.+.... +..+.+ ...+=++.+.. ...-+.++-+|+|.|+||..|+..++. .+..+..|+..||
T Consensus 143 ~R~~~~~~n~~~~~~L~~eLlP~v~~~y------p~~~~a~~r~L~G~SlGG~vsL~agl~------~Pe~FG~V~s~Sp 210 (299)
T COG2382 143 KRREELHCNEAYWRFLAQELLPYVEERY------PTSADADGRVLAGDSLGGLVSLYAGLR------HPERFGHVLSQSG 210 (299)
T ss_pred HHHHHhcccHHHHHHHHHHhhhhhhccC------cccccCCCcEEeccccccHHHHHHHhc------CchhhceeeccCC
Confidence 111111 222232 22334444443 333467788999999999999999998 6778999999999
Q ss_pred cCCCCCCChHHH--hhcCCCCcchhhHHHHHHHcCCCC--CCCCcHHHHHHHHHHHHCCCcEEEEEeCCCceEEEec
Q 040187 204 FFGGEERTESEM--RFQRDPLVGLKLTDWMWKAFLPEG--SNRDHPAANRYYEGLKKCGKDAYLIEYPNAVHCFYLF 276 (299)
Q Consensus 204 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~ 276 (299)
.++......... .......... ........+..+ .....+.-.++++.|++.|.+..+.+|+| +|.+..+
T Consensus 211 s~~~~~~~~~~~~~~~~~l~~~~a--~~~~~~~~l~~g~~~~~~~~pNr~L~~~L~~~g~~~~yre~~G-gHdw~~W 284 (299)
T COG2382 211 SFWWTPLDTQPQGEVAESLKILHA--IGTDERIVLTTGGEEGDFLRPNRALAAQLEKKGIPYYYREYPG-GHDWAWW 284 (299)
T ss_pred ccccCccccccccchhhhhhhhhc--cCccceEEeecCCccccccchhHHHHHHHHhcCCcceeeecCC-CCchhHh
Confidence 887653321100 0000000000 000000111111 11223333489999999999999999999 9966544
No 104
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.02 E-value=2.4e-09 Score=87.04 Aligned_cols=146 Identities=18% Similarity=0.165 Sum_probs=79.5
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCC-----C
Q 040187 137 YEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEER-----T 211 (299)
Q Consensus 137 ~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~-----~ 211 (299)
+|-...|++||.++.. ++.++|+|+|.|.||-+|+.+|.+. + .++++|+++|-.-.... .
T Consensus 3 LEyfe~Ai~~L~~~p~--------v~~~~Igi~G~SkGaelALllAs~~------~-~i~avVa~~ps~~~~~~~~~~~~ 67 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPE--------VDPDKIGIIGISKGAELALLLASRF------P-QISAVVAISPSSVVFQGIGFYRD 67 (213)
T ss_dssp CHHHHHHHHHHHCSTT--------B--SSEEEEEETHHHHHHHHHHHHS------S-SEEEEEEES--SB--SSEEEETT
T ss_pred hHHHHHHHHHHHhCCC--------CCCCCEEEEEECHHHHHHHHHHhcC------C-CccEEEEeCCceeEecchhcccC
Confidence 4567889999999875 8899999999999999999999974 2 79999999874211100 0
Q ss_pred h----HHHhhc------CCCC-------c-------------chhhHHHHHHHcCCCCCCCCcHHHH---HHHHHHHHCC
Q 040187 212 E----SEMRFQ------RDPL-------V-------------GLKLTDWMWKAFLPEGSNRDHPAAN---RYYEGLKKCG 258 (299)
Q Consensus 212 ~----~~~~~~------~~~~-------~-------------~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~g 258 (299)
. ...... ..+. . ..+... ..-.++.+..|..-|... .+.++|+++|
T Consensus 68 ~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~-~piLli~g~dD~~WpS~~~a~~i~~rL~~~~ 146 (213)
T PF08840_consen 68 SSKPLPYLPFDISKFSWNEPGLLRSRYAFELADDKAVEEARIPVEKIK-GPILLISGEDDQIWPSSEMAEQIEERLKAAG 146 (213)
T ss_dssp E--EE----B-GGG-EE-TTS-EE-TT-B--TTTGGGCCCB--GGG---SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT
T ss_pred CCccCCcCCcChhhceecCCcceehhhhhhcccccccccccccHHHcC-CCEEEEEeCCCCccchHHHHHHHHHHHHHhC
Confidence 0 000000 0000 0 000000 000011222333333322 6667888888
Q ss_pred Cc--EEEEEeCCCceEEEec--CC-----------------c-----hHHHHHHHHHHHHHHhhhc
Q 040187 259 KD--AYLIEYPNAVHCFYLF--PE-----------------V-----LECSLFLKEVKDFICSQAA 298 (299)
Q Consensus 259 ~~--~~~~~~~g~~H~f~~~--~~-----------------~-----~~~~~~~~~i~~fl~~~~~ 298 (299)
.+ ++++.||+++|.+..- +. . ...++.+.++++||++||+
T Consensus 147 ~~~~~~~l~Y~~aGH~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 147 FPHNVEHLSYPGAGHLIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp -----EEEEETTB-S---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CCCcceEEEcCCCCceecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 55 8899999999987531 10 0 2567889999999999986
No 105
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.01 E-value=3.5e-09 Score=94.62 Aligned_cols=223 Identities=16% Similarity=0.132 Sum_probs=145.6
Q ss_pred CceEEEEE--EcCCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC
Q 040187 55 GVTSFDVS--VDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR 132 (299)
Q Consensus 55 ~~~~~~~~--~~~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~ 132 (299)
+..+++.. -.||..|++-|.. ++.+..+.|++||-.||--+.. ...|......+. +.|-+.+..+.|+.+|..
T Consensus 391 ~~~veQ~~atSkDGT~IPYFiv~-K~~~~d~~pTll~aYGGF~vsl---tP~fs~~~~~WL-erGg~~v~ANIRGGGEfG 465 (648)
T COG1505 391 NYEVEQFFATSKDGTRIPYFIVR-KGAKKDENPTLLYAYGGFNISL---TPRFSGSRKLWL-ERGGVFVLANIRGGGEFG 465 (648)
T ss_pred CceEEEEEEEcCCCccccEEEEe-cCCcCCCCceEEEecccccccc---CCccchhhHHHH-hcCCeEEEEecccCCccC
Confidence 44444433 3488889998887 6533247899999988754433 333566565555 789999999999987753
Q ss_pred C-----------CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEe
Q 040187 133 C-----------PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAI 201 (299)
Q Consensus 133 ~-----------~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~ 201 (299)
- ....+|..++.++|.++.. ..|+++++.|.|-||-|......+ .|..+.++|+-
T Consensus 466 p~WH~Aa~k~nrq~vfdDf~AVaedLi~rgi--------tspe~lgi~GgSNGGLLvg~alTQ------rPelfgA~v~e 531 (648)
T COG1505 466 PEWHQAGMKENKQNVFDDFIAVAEDLIKRGI--------TSPEKLGIQGGSNGGLLVGAALTQ------RPELFGAAVCE 531 (648)
T ss_pred HHHHHHHhhhcchhhhHHHHHHHHHHHHhCC--------CCHHHhhhccCCCCceEEEeeecc------ChhhhCceeec
Confidence 1 2457999999999999875 589999999999999876555444 67789999999
Q ss_pred cccCCCCCCC-----hHHHh-hcC-------------CCCcchhhHHHHHHHcCC--CCCCCCcHHHH-HHHHHHHHCCC
Q 040187 202 QPFFGGEERT-----ESEMR-FQR-------------DPLVGLKLTDWMWKAFLP--EGSNRDHPAAN-RYYEGLKKCGK 259 (299)
Q Consensus 202 ~p~~~~~~~~-----~~~~~-~~~-------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~l~~~g~ 259 (299)
.|++|.-.-. .+... +.+ .|.-+......+...++. ...|+.+|.-. +|+.+|++++.
T Consensus 532 vPllDMlRYh~l~aG~sW~~EYG~Pd~P~d~~~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~ 611 (648)
T COG1505 532 VPLLDMLRYHLLTAGSSWIAEYGNPDDPEDRAFLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGA 611 (648)
T ss_pred cchhhhhhhcccccchhhHhhcCCCCCHHHHHHHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhcCC
Confidence 9988743211 11111 111 111111111111111111 12344455443 99999999999
Q ss_pred cEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHHhhhc
Q 040187 260 DAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICSQAA 298 (299)
Q Consensus 260 ~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~~~~ 298 (299)
++-+++--+++|+-... ..+.......+..||.++|.
T Consensus 612 pv~~~e~t~gGH~g~~~--~~~~A~~~a~~~afl~r~L~ 648 (648)
T COG1505 612 PVLLREETKGGHGGAAP--TAEIARELADLLAFLLRTLG 648 (648)
T ss_pred ceEEEeecCCcccCCCC--hHHHHHHHHHHHHHHHHhhC
Confidence 99988888999954332 24455666778889988763
No 106
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.00 E-value=7.5e-08 Score=92.13 Aligned_cols=92 Identities=13% Similarity=0.022 Sum_probs=65.8
Q ss_pred HHHHHHhhCCcEEEeecCCCCCCCC------CCchhHHHHHHHHHHHhhcCC------CCCCCCCCCCCcEEEEecChhH
Q 040187 108 ACRRLAVEVPAVVISVNYRRSPEHR------CPSQYEDGIDALKFIDSSFID------IQNFPACADIKQCFLAGDSAGG 175 (299)
Q Consensus 108 ~~~~la~~~g~~v~~~dyr~~~~~~------~~~~~~D~~~a~~~l~~~~~~------~~~~~~~~d~~~i~l~G~S~GG 175 (299)
+.+.++ .+||+|+.+|.|+..++. .+...+|..++++|+..+... ..+.+-.-...+|+++|.|+||
T Consensus 271 ~~~~~~-~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G 349 (767)
T PRK05371 271 LNDYFL-PRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLG 349 (767)
T ss_pred HHHHHH-hCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHH
Confidence 345565 789999999999864432 245678999999999865310 0000001135799999999999
Q ss_pred HHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 176 NLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 176 ~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
.+++.+|.. .++.++++|..+++.+
T Consensus 350 ~~~~~aAa~------~pp~LkAIVp~a~is~ 374 (767)
T PRK05371 350 TLPNAVATT------GVEGLETIIPEAAISS 374 (767)
T ss_pred HHHHHHHhh------CCCcceEEEeeCCCCc
Confidence 999999876 5668899998877643
No 107
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.99 E-value=7.4e-09 Score=89.29 Aligned_cols=99 Identities=18% Similarity=0.199 Sum_probs=67.5
Q ss_pred ccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC-----chhHHHHHHHHHHHhhcCCCCCCC
Q 040187 84 LPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP-----SQYEDGIDALKFIDSSFIDIQNFP 158 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~-----~~~~D~~~a~~~l~~~~~~~~~~~ 158 (299)
.+.||++||++. +... ......+. ..+|.|+++|+|+.+.+..+ ...+|..+.+..+.+..
T Consensus 27 ~~~lvllHG~~~---~~~~---~~~~~~~~-~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l------- 92 (306)
T TIGR01249 27 GKPVVFLHGGPG---SGTD---PGCRRFFD-PETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKL------- 92 (306)
T ss_pred CCEEEEECCCCC---CCCC---HHHHhccC-ccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHc-------
Confidence 356899999642 2221 22333332 46899999999987655432 23456666666666543
Q ss_pred CCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 159 ACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 159 ~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
+.++++++|||+||.+++.++.+ .+..++++|+.++..
T Consensus 93 ---~~~~~~lvG~S~GG~ia~~~a~~------~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 93 ---GIKNWLVFGGSWGSTLALAYAQT------HPEVVTGLVLRGIFL 130 (306)
T ss_pred ---CCCCEEEEEECHHHHHHHHHHHH------ChHhhhhheeecccc
Confidence 35679999999999999999987 455688888876543
No 108
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.96 E-value=1.5e-08 Score=91.13 Aligned_cols=133 Identities=17% Similarity=0.125 Sum_probs=101.1
Q ss_pred eEEEEEEc--CCCCEEEEEEecCCC-CCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCC
Q 040187 57 TSFDVSVD--ATRDLWFRLYSPTNT-TATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRC 133 (299)
Q Consensus 57 ~~~~~~~~--~~~~i~~~i~~P~~~-~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~ 133 (299)
.++.+.++ ||..+++.|..-+.. ..++.|.++|.|||.-+.-..+. ..--.-|. +.|.+..-.+-|+.++...
T Consensus 440 ~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f---~~srl~ll-d~G~Vla~a~VRGGGe~G~ 515 (712)
T KOG2237|consen 440 VVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSF---RASRLSLL-DRGWVLAYANVRGGGEYGE 515 (712)
T ss_pred EEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeecccc---ccceeEEE-ecceEEEEEeeccCccccc
Confidence 44455554 778888888763332 33688999999998655444332 33222333 6899999999999877643
Q ss_pred C-----------chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEec
Q 040187 134 P-----------SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQ 202 (299)
Q Consensus 134 ~-----------~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~ 202 (299)
. ..++|..++.++|.++.. ..+++.++.|.|+||-++.+...+ .|+.+.++|+-.
T Consensus 516 ~WHk~G~lakKqN~f~Dfia~AeyLve~gy--------t~~~kL~i~G~SaGGlLvga~iN~------rPdLF~avia~V 581 (712)
T KOG2237|consen 516 QWHKDGRLAKKQNSFDDFIACAEYLVENGY--------TQPSKLAIEGGSAGGLLVGACINQ------RPDLFGAVIAKV 581 (712)
T ss_pred chhhccchhhhcccHHHHHHHHHHHHHcCC--------CCccceeEecccCccchhHHHhcc------CchHhhhhhhcC
Confidence 2 457899999999999886 789999999999999999988877 778999999999
Q ss_pred ccCCC
Q 040187 203 PFFGG 207 (299)
Q Consensus 203 p~~~~ 207 (299)
|++|.
T Consensus 582 pfmDv 586 (712)
T KOG2237|consen 582 PFMDV 586 (712)
T ss_pred cceeh
Confidence 98763
No 109
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.95 E-value=7.1e-08 Score=83.42 Aligned_cols=103 Identities=17% Similarity=0.251 Sum_probs=69.7
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCC-CCCCC----chhHHHHHHHHHHHhhcCCCCC
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSP-EHRCP----SQYEDGIDALKFIDSSFIDIQN 156 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~-~~~~~----~~~~D~~~a~~~l~~~~~~~~~ 156 (299)
...|.||++||=| + +...++..+..+..+.|+.|+++|..+.+ ..+.+ -.+.+....++-+....
T Consensus 56 ~~~~pvlllHGF~----~-~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~----- 125 (326)
T KOG1454|consen 56 KDKPPVLLLHGFG----A-SSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEV----- 125 (326)
T ss_pred CCCCcEEEecccc----C-CcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhh-----
Confidence 3578899999932 2 33446778888887778999999998743 22211 23344444444433322
Q ss_pred CCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEE---EecccC
Q 040187 157 FPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLI---AIQPFF 205 (299)
Q Consensus 157 ~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i---~~~p~~ 205 (299)
..+++.++|||+||.+|..+|.. .+..++.++ ++.|..
T Consensus 126 -----~~~~~~lvghS~Gg~va~~~Aa~------~P~~V~~lv~~~~~~~~~ 166 (326)
T KOG1454|consen 126 -----FVEPVSLVGHSLGGIVALKAAAY------YPETVDSLVLLDLLGPPV 166 (326)
T ss_pred -----cCcceEEEEeCcHHHHHHHHHHh------Ccccccceeeeccccccc
Confidence 23459999999999999999998 566788888 555543
No 110
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=98.94 E-value=4.2e-08 Score=87.16 Aligned_cols=103 Identities=16% Similarity=0.077 Sum_probs=66.9
Q ss_pred CccEEEEEcCCccccccCCCc-----------hhHHHHH---HHHhhCCcEEEeecCCCC-CCC-----CC---------
Q 040187 83 NLPVIVYFHGGGFAILAANSK-----------VYDDACR---RLAVEVPAVVISVNYRRS-PEH-----RC--------- 133 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~-----------~~~~~~~---~la~~~g~~v~~~dyr~~-~~~-----~~--------- 133 (299)
..|.||++||.+ ++.... .++.++. .+. ..+|.|+++|.++. .+. ..
T Consensus 47 ~~p~vvl~HG~~---~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~-~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~ 122 (379)
T PRK00175 47 RSNAVLICHALT---GDHHVAGPHSPDDPKPGWWDNMVGPGKPID-TDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGS 122 (379)
T ss_pred CCCEEEEeCCcC---CchhhcccccccCCCCcchhhccCCCCccC-ccceEEEeccCCCCCCCCCCCCCCCCCCCCcccC
Confidence 358999999954 222210 1222221 221 45899999999872 111 00
Q ss_pred ---CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCc-EEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 134 ---PSQYEDGIDALKFIDSSFIDIQNFPACADIKQ-CFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 134 ---~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~-i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
+..++|..+.+.-+.+.. ..++ +.++|+||||.+|+.+|.+ .+.+++++|++++..
T Consensus 123 ~~~~~~~~~~~~~~~~~l~~l----------~~~~~~~lvG~S~Gg~ia~~~a~~------~p~~v~~lvl~~~~~ 182 (379)
T PRK00175 123 DFPVITIRDWVRAQARLLDAL----------GITRLAAVVGGSMGGMQALEWAID------YPDRVRSALVIASSA 182 (379)
T ss_pred CCCcCCHHHHHHHHHHHHHHh----------CCCCceEEEEECHHHHHHHHHHHh------ChHhhhEEEEECCCc
Confidence 224566666666665544 3466 5899999999999999998 566899999988654
No 111
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.90 E-value=4.2e-09 Score=88.12 Aligned_cols=125 Identities=20% Similarity=0.278 Sum_probs=79.2
Q ss_pred CCCEEEEEEecCCC-CCCCccEEEEEcC-CccccccCCCchhHHHHHHHHhhCC---cEEEeecCCCCC----C------
Q 040187 66 TRDLWFRLYSPTNT-TATNLPVIVYFHG-GGFAILAANSKVYDDACRRLAVEVP---AVVISVNYRRSP----E------ 130 (299)
Q Consensus 66 ~~~i~~~i~~P~~~-~~~~~p~vv~~HG-Gg~~~g~~~~~~~~~~~~~la~~~g---~~v~~~dyr~~~----~------ 130 (299)
+....+.||.|.+. +.++.|+|+++|| ++|.... .....+..++.+.. .++|.++..... .
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~----~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~ 80 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNG----NAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAG 80 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHH----HHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBC
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccc----hHHHHHHHHHHhCCCCceEEEEEecccccccccccccccc
Confidence 34678899999983 4478999999999 6654211 12334444443322 444555543221 0
Q ss_pred -------CCCCchhHHH--HHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEe
Q 040187 131 -------HRCPSQYEDG--IDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAI 201 (299)
Q Consensus 131 -------~~~~~~~~D~--~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~ 201 (299)
......+++. .+.+.+|.++. ++++++.+|+|+|+||..|+.++.+ ++..+.+++++
T Consensus 81 ~~~~~~~~~~~~~~~~~l~~el~p~i~~~~--------~~~~~~~~i~G~S~GG~~Al~~~l~------~Pd~F~~~~~~ 146 (251)
T PF00756_consen 81 SSRRADDSGGGDAYETFLTEELIPYIEANY--------RTDPDRRAIAGHSMGGYGALYLALR------HPDLFGAVIAF 146 (251)
T ss_dssp TTCBCTSTTTHHHHHHHHHTHHHHHHHHHS--------SEEECCEEEEEETHHHHHHHHHHHH------STTTESEEEEE
T ss_pred cccccccCCCCcccceehhccchhHHHHhc--------ccccceeEEeccCCCcHHHHHHHHh------Ccccccccccc
Confidence 0000112222 23455665554 3566669999999999999999999 77889999999
Q ss_pred cccCCCC
Q 040187 202 QPFFGGE 208 (299)
Q Consensus 202 ~p~~~~~ 208 (299)
||.++..
T Consensus 147 S~~~~~~ 153 (251)
T PF00756_consen 147 SGALDPS 153 (251)
T ss_dssp SEESETT
T ss_pred Ccccccc
Confidence 9886543
No 112
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.89 E-value=3.9e-08 Score=77.81 Aligned_cols=89 Identities=24% Similarity=0.246 Sum_probs=52.1
Q ss_pred EEEEcCCccccccCCCchhHHHHHHHHhhCC--cEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 040187 87 IVYFHGGGFAILAANSKVYDDACRRLAVEVP--AVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADIK 164 (299)
Q Consensus 87 vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g--~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~ 164 (299)
|+|+|| |. .+..+.-...+.+.++ +.+ +.+..+++... .+++.+.++-+.+.. .++
T Consensus 2 ilYlHG--F~-Ssp~S~Ka~~l~~~~~-~~~~~~~~~~p~l~~~--------p~~a~~~l~~~i~~~----------~~~ 59 (187)
T PF05728_consen 2 ILYLHG--FN-SSPQSFKAQALKQYFA-EHGPDIQYPCPDLPPF--------PEEAIAQLEQLIEEL----------KPE 59 (187)
T ss_pred eEEecC--CC-CCCCCHHHHHHHHHHH-HhCCCceEECCCCCcC--------HHHHHHHHHHHHHhC----------CCC
Confidence 799999 32 2333321223333343 444 34444444422 234444444444433 345
Q ss_pred cEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 165 QCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 165 ~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
.++|+|.|+||+.|..+|.+. .+++ |+++|.+.
T Consensus 60 ~~~liGSSlGG~~A~~La~~~--------~~~a-vLiNPav~ 92 (187)
T PF05728_consen 60 NVVLIGSSLGGFYATYLAERY--------GLPA-VLINPAVR 92 (187)
T ss_pred CeEEEEEChHHHHHHHHHHHh--------CCCE-EEEcCCCC
Confidence 599999999999999999874 2344 88899775
No 113
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.89 E-value=1.3e-08 Score=91.91 Aligned_cols=134 Identities=18% Similarity=0.135 Sum_probs=99.3
Q ss_pred CceEEEEEEc--CCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHH---HHHhhCCcEEEeecCCCCC
Q 040187 55 GVTSFDVSVD--ATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACR---RLAVEVPAVVISVNYRRSP 129 (299)
Q Consensus 55 ~~~~~~~~~~--~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~---~la~~~g~~v~~~dyr~~~ 129 (299)
++.++++.+. ||..|.++||.|++. ++.|+++..+=..+...+........... .++ +.||+|+..|-|+..
T Consensus 16 ~~~~~~v~V~MRDGvrL~~dIy~Pa~~--g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~a-a~GYavV~qDvRG~~ 92 (563)
T COG2936 16 GYIERDVMVPMRDGVRLAADIYRPAGA--GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFA-AQGYAVVNQDVRGRG 92 (563)
T ss_pred ceeeeeeeEEecCCeEEEEEEEccCCC--CCCceeEEeeccccccccccCcchhhcccccceee-cCceEEEEecccccc
Confidence 3566777776 899999999999987 79999999993222211100100112222 354 889999999999865
Q ss_pred CCC--C----CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecc
Q 040187 130 EHR--C----PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQP 203 (299)
Q Consensus 130 ~~~--~----~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p 203 (299)
++. + ....+|.++.|+|+.+..- ...+|+.+|-|.+|+..+.+|.. .++.+++++...+
T Consensus 93 ~SeG~~~~~~~~E~~Dg~D~I~Wia~QpW---------sNG~Vgm~G~SY~g~tq~~~Aa~------~pPaLkai~p~~~ 157 (563)
T COG2936 93 GSEGVFDPESSREAEDGYDTIEWLAKQPW---------SNGNVGMLGLSYLGFTQLAAAAL------QPPALKAIAPTEG 157 (563)
T ss_pred cCCcccceeccccccchhHHHHHHHhCCc---------cCCeeeeecccHHHHHHHHHHhc------CCchheeeccccc
Confidence 432 1 1478999999999999763 56889999999999999999987 7778999998887
Q ss_pred cCC
Q 040187 204 FFG 206 (299)
Q Consensus 204 ~~~ 206 (299)
..|
T Consensus 158 ~~D 160 (563)
T COG2936 158 LVD 160 (563)
T ss_pred ccc
Confidence 665
No 114
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.88 E-value=1.3e-08 Score=89.46 Aligned_cols=117 Identities=18% Similarity=0.177 Sum_probs=73.9
Q ss_pred CCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCc---------hhHHHH---HHHHhhCCcEEEeecCCC--CCCCC
Q 040187 67 RDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSK---------VYDDAC---RRLAVEVPAVVISVNYRR--SPEHR 132 (299)
Q Consensus 67 ~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~---------~~~~~~---~~la~~~g~~v~~~dyr~--~~~~~ 132 (299)
..+.++.+-+.+. ...|+||++||-+ ++.... .++.++ ..+. ..+|.|+++|+|+ .+...
T Consensus 16 ~~~~y~~~g~~~~--~~~~~vll~Hg~~---~~~~~~~~~~~~~~~~w~~~~~~~~~l~-~~~~~vi~~D~~G~~~g~s~ 89 (351)
T TIGR01392 16 VRVAYETYGTLNA--ERSNAVLVCHALT---GDAHVAGYHDDGDPGWWDDLIGPGRAID-TDRYFVVCSNVLGGCYGSTG 89 (351)
T ss_pred ceEEEEeccccCC--CCCCEEEEcCCcC---cchhhcccCCCCCCCchhhccCCCCCcC-CCceEEEEecCCCCCCCCCC
Confidence 3455555533222 2347899999933 222110 133332 1332 5689999999998 21111
Q ss_pred --------------C-CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCc-EEEEecChhHHHHHHHHHHhccCCCCCCccc
Q 040187 133 --------------C-PSQYEDGIDALKFIDSSFIDIQNFPACADIKQ-CFLAGDSAGGNLAHNVAVLADGCNFSRLRLN 196 (299)
Q Consensus 133 --------------~-~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~-i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~ 196 (299)
+ +..++|..+.+.-+.+.. ..++ ++++||||||.+|+.++.+ .+..++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----------~~~~~~~l~G~S~Gg~ia~~~a~~------~p~~v~ 153 (351)
T TIGR01392 90 PSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHL----------GIEQIAAVVGGSMGGMQALEWAID------YPERVR 153 (351)
T ss_pred CCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHc----------CCCCceEEEEECHHHHHHHHHHHH------ChHhhh
Confidence 1 234567666666665543 3466 9999999999999999988 566799
Q ss_pred eEEEecccC
Q 040187 197 GLIAIQPFF 205 (299)
Q Consensus 197 ~~i~~~p~~ 205 (299)
++|++++..
T Consensus 154 ~lvl~~~~~ 162 (351)
T TIGR01392 154 AIVVLATSA 162 (351)
T ss_pred eEEEEccCC
Confidence 999988754
No 115
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.87 E-value=2.8e-08 Score=84.79 Aligned_cols=124 Identities=22% Similarity=0.194 Sum_probs=91.0
Q ss_pred CCCce-EEEEEEc---CCCCEEEEEEecCCCCC----CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeec
Q 040187 53 KNGVT-SFDVSVD---ATRDLWFRLYSPTNTTA----TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVN 124 (299)
Q Consensus 53 ~~~~~-~~~~~~~---~~~~i~~~i~~P~~~~~----~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~d 124 (299)
+.++. ...+++. .+..+.+++|.|..... ...|+|++-||-| ++. ..+...+..++ +.||+|..++
T Consensus 32 ~~g~~~~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~G---s~~--~~f~~~A~~lA-s~Gf~Va~~~ 105 (365)
T COG4188 32 PEGVALFVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSG---SYV--TGFAWLAEHLA-SYGFVVAAPD 105 (365)
T ss_pred ccCcceEEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCC---CCc--cchhhhHHHHh-hCceEEEecc
Confidence 44555 5666665 35789999999987653 4899999999954 222 23678888898 8899999999
Q ss_pred CCCCCCCCC-----------C----chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHH
Q 040187 125 YRRSPEHRC-----------P----SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAV 183 (299)
Q Consensus 125 yr~~~~~~~-----------~----~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~ 183 (299)
+.++-.... | ....|+...+.+|.+. .+-+.+..++|+.+|+++|||.||+.++.++.
T Consensus 106 hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~-~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 106 HPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQL-TASPALAGRLDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred CCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHh-hcCcccccccCccceEEEecccccHHHHHhcc
Confidence 986422111 1 2346888888888777 22244577799999999999999999998863
No 116
>COG0627 Predicted esterase [General function prediction only]
Probab=98.85 E-value=1.8e-08 Score=85.96 Aligned_cols=213 Identities=16% Similarity=0.165 Sum_probs=114.1
Q ss_pred EEEEecCCCC----CCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCC-C------------CCCCCC
Q 040187 71 FRLYSPTNTT----ATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYR-R------------SPEHRC 133 (299)
Q Consensus 71 ~~i~~P~~~~----~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr-~------------~~~~~~ 133 (299)
+.++.|.... ..+.|++++.||=. ++........-+++.+.+.|.+++.+|-. . .....|
T Consensus 37 ~~v~~~~~p~s~~m~~~ipV~~~l~G~t---~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sf 113 (316)
T COG0627 37 FPVELPPVPASPSMGRDIPVLYLLSGLT---CNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASF 113 (316)
T ss_pred cccccCCcccccccCCCCCEEEEeCCCC---CCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccce
Confidence 4555555431 36789999999922 23222222334667777999999998533 1 000111
Q ss_pred C-chhH----H-HHHHHHHHHhhcCCCCCCCCCCCC--CcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 134 P-SQYE----D-GIDALKFIDSSFIDIQNFPACADI--KQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 134 ~-~~~~----D-~~~a~~~l~~~~~~~~~~~~~~d~--~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
. ...+ . .++-..+|.++....-...+..+. ++.+++|+||||+-|+.+|++ ++++++.+..++|++
T Consensus 114 Y~d~~~~~~~~~~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~------~pd~f~~~sS~Sg~~ 187 (316)
T COG0627 114 YSDWTQPPWASGPYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALK------HPDRFKSASSFSGIL 187 (316)
T ss_pred ecccccCccccCccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhh------Ccchhceeccccccc
Confidence 0 0000 0 022222222221100000112343 389999999999999999998 556889999999887
Q ss_pred CCC---------CCC----hHHHhh---------cCCCCcchhhHHHH------------HHHcCCCCCCCCcHH-----
Q 040187 206 GGE---------ERT----ESEMRF---------QRDPLVGLKLTDWM------------WKAFLPEGSNRDHPA----- 246 (299)
Q Consensus 206 ~~~---------~~~----~~~~~~---------~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~----- 246 (299)
+.. ... .....+ ..++....+..... .+.....+.....-.
T Consensus 188 ~~s~~~~~~~~~~~~~g~~~~~~~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~ 267 (316)
T COG0627 188 SPSSPWGPTLAMGDPWGGKAFNAMLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLS 267 (316)
T ss_pred cccccccccccccccccCccHHHhcCCCccccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccC
Confidence 654 110 000000 01111111110000 000000000000011
Q ss_pred HHHHHHHHHHCCCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHHhhhc
Q 040187 247 ANRYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICSQAA 298 (299)
Q Consensus 247 ~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~~~~ 298 (299)
...|.+++++.|.+.+++..+++.|.+..+ ...+.....|+.+.++
T Consensus 268 ~~~~~~a~~~~g~~~~~~~~~~G~Hsw~~w------~~~l~~~~~~~a~~l~ 313 (316)
T COG0627 268 TRAFAEALRAAGIPNGVRDQPGGDHSWYFW------ASQLADHLPWLAGALG 313 (316)
T ss_pred HHHHHHHHHhcCCCceeeeCCCCCcCHHHH------HHHHHHHHHHHHHHhc
Confidence 118899999999999999999999988765 5678888888887764
No 117
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.80 E-value=1.2e-07 Score=86.58 Aligned_cols=134 Identities=17% Similarity=0.187 Sum_probs=85.7
Q ss_pred EEEEEEcCCCCEEEEEEecCCCCCCCccEEEEEcCC---ccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC--
Q 040187 58 SFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGG---GFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR-- 132 (299)
Q Consensus 58 ~~~~~~~~~~~i~~~i~~P~~~~~~~~p~vv~~HGG---g~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~-- 132 (299)
..+|.+. ...+.+.-|.|.+.+ ...+-||++||- +|+ .+... ..++++.|+ +.|+.|+.+|+|..+...
T Consensus 164 pg~VV~~-~~~~eLi~Y~P~t~~-~~~~PlLiVp~~i~k~yi-lDL~p--~~Slv~~L~-~qGf~V~~iDwrgpg~s~~~ 237 (532)
T TIGR01838 164 PGAVVFE-NELFQLIQYEPTTET-VHKTPLLIVPPWINKYYI-LDLRP--QNSLVRWLV-EQGHTVFVISWRNPDASQAD 237 (532)
T ss_pred CCeEEEE-CCcEEEEEeCCCCCc-CCCCcEEEECccccccee-eeccc--chHHHHHHH-HCCcEEEEEECCCCCccccc
Confidence 3455554 456777778887653 244567889992 221 11111 247888887 779999999999754332
Q ss_pred --CCchh-HHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHH-HhccCCCCCCccceEEEecccCCCC
Q 040187 133 --CPSQY-EDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAV-LADGCNFSRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 133 --~~~~~-~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~-~~~~~~~~~~~~~~~i~~~p~~~~~ 208 (299)
+.... +++.++++.+.+.. ..+++.++|||+||.+++.++. ..... .+.++++++++...+|..
T Consensus 238 ~~~ddY~~~~i~~al~~v~~~~----------g~~kv~lvG~cmGGtl~a~ala~~aa~~--~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 238 KTFDDYIRDGVIAALEVVEAIT----------GEKQVNCVGYCIGGTLLSTALAYLAARG--DDKRIKSATFFTTLLDFS 305 (532)
T ss_pred CChhhhHHHHHHHHHHHHHHhc----------CCCCeEEEEECcCcHHHHHHHHHHHHhC--CCCccceEEEEecCcCCC
Confidence 22222 45777888887654 5688999999999998644221 11110 134789999998877755
Q ss_pred C
Q 040187 209 E 209 (299)
Q Consensus 209 ~ 209 (299)
.
T Consensus 306 ~ 306 (532)
T TIGR01838 306 D 306 (532)
T ss_pred C
Confidence 3
No 118
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.71 E-value=1.6e-06 Score=70.02 Aligned_cols=103 Identities=17% Similarity=0.130 Sum_probs=65.9
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACAD 162 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d 162 (299)
..+.++.||=.| |+... |..+.+++- ..+.++.++|.+-...--.....|+.+..+-+..... . -..
T Consensus 6 ~~~~L~cfP~AG---Gsa~~--fr~W~~~lp--~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~-----~-~~~ 72 (244)
T COG3208 6 ARLRLFCFPHAG---GSASL--FRSWSRRLP--ADIELLAVQLPGRGDRFGEPLLTDIESLADELANELL-----P-PLL 72 (244)
T ss_pred CCceEEEecCCC---CCHHH--HHHHHhhCC--chhheeeecCCCcccccCCcccccHHHHHHHHHHHhc-----c-ccC
Confidence 445666666533 34333 677777664 2588999999976544333455666666666555431 1 012
Q ss_pred CCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEe
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAI 201 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~ 201 (299)
-...+++||||||.+|..+|.++...+. .+.++.+.
T Consensus 73 d~P~alfGHSmGa~lAfEvArrl~~~g~---~p~~lfis 108 (244)
T COG3208 73 DAPFALFGHSMGAMLAFEVARRLERAGL---PPRALFIS 108 (244)
T ss_pred CCCeeecccchhHHHHHHHHHHHHHcCC---CcceEEEe
Confidence 3579999999999999999999887644 24555443
No 119
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.68 E-value=1.2e-06 Score=71.78 Aligned_cols=217 Identities=15% Similarity=0.126 Sum_probs=111.3
Q ss_pred CceEEEEEEc-CCCCEEEEEEecCCCCC-CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCC-----
Q 040187 55 GVTSFDVSVD-ATRDLWFRLYSPTNTTA-TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRR----- 127 (299)
Q Consensus 55 ~~~~~~~~~~-~~~~i~~~i~~P~~~~~-~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~----- 127 (299)
....+++... .+....+.+++|++... .+.| |||+|.|.-+++.. ...+...++...-...+.+.|+.
T Consensus 8 ~~~~~~l~s~~~~~~yri~i~~P~~~~~~~~Yp-VlY~lDGn~vf~~~----~~~~~~~~~~~~~~~iv~iGye~~~~~~ 82 (264)
T COG2819 8 HFRERDLKSANTGRKYRIFIATPKNYPKPGGYP-VLYMLDGNAVFNAL----TEIMLRILADLPPPVIVGIGYETILVFD 82 (264)
T ss_pred cceeEeeeecCCCcEEEEEecCCCCCCCCCCCc-EEEEecchhhhchH----HHHhhhhhhcCCCceEEEeccccccccc
Confidence 4455666555 45567777888987632 3356 56667654332221 22234444433333455566663
Q ss_pred --------CCCCC----------CCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCC
Q 040187 128 --------SPEHR----------CPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCN 189 (299)
Q Consensus 128 --------~~~~~----------~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~ 189 (299)
.|... +...---..+-.++|.+...-..+..+.++.++.+++|||+||-+++...+.
T Consensus 83 ~~~r~~DyTp~~~~~~~~~~~~~~~~~gGg~~~f~~fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~----- 157 (264)
T COG2819 83 PNRRAYDYTPPSANAIVASSRDGFYQFGGGGDAFREFLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLT----- 157 (264)
T ss_pred cccccccCCCCCCCcccccccCCCCCCCCChHHHHHHHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhc-----
Confidence 11110 0000001122233343332111112456899999999999999999999987
Q ss_pred CCCCccceEEEecccCCCCCCChHHHhhcCCCCcchhhHHHHHHHcCCCC-CCCCcHHH--------HHHHHHHHH-CCC
Q 040187 190 FSRLRLNGLIAIQPFFGGEERTESEMRFQRDPLVGLKLTDWMWKAFLPEG-SNRDHPAA--------NRYYEGLKK-CGK 259 (299)
Q Consensus 190 ~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--------~~~~~~l~~-~g~ 259 (299)
.+..+...+++||-+.+....... ........ . ..-...++..+ .+...... .+..+.+++ .|.
T Consensus 158 -~p~~F~~y~~~SPSlWw~n~~~l~-~~~~~~~~---~-~~~i~l~iG~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 231 (264)
T COG2819 158 -YPDCFGRYGLISPSLWWHNEAILR-EIESLKLL---K-TKRICLYIGSGELDSSRSIRMAENKQEAAELSSLLEKRTGA 231 (264)
T ss_pred -CcchhceeeeecchhhhCCHHHhc-cccccccC---C-CcceEEEecccccCcchhhhhhhHHHHHHHHHHHHhhccCC
Confidence 667899999999976544321110 00000000 0 00001122211 11111111 155556666 788
Q ss_pred cEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHH
Q 040187 260 DAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFIC 294 (299)
Q Consensus 260 ~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~ 294 (299)
.+.+..+|+..|+-. ....+...+.|+.
T Consensus 232 ~~~f~~~~~~~H~~~-------~~~~~~~al~~l~ 259 (264)
T COG2819 232 RLVFQEEPLEHHGSV-------IHASLPSALRFLD 259 (264)
T ss_pred ceEecccccccccch-------HHHHHHHHHHhhh
Confidence 999999998888533 2334555555554
No 120
>PRK07868 acyl-CoA synthetase; Validated
Probab=98.67 E-value=2.2e-06 Score=85.35 Aligned_cols=127 Identities=14% Similarity=0.158 Sum_probs=75.3
Q ss_pred EEEEEcCCCCEEEEEEecCCCC---CCCccEEEEEcCCccccccCCCch---hHHHHHHHHhhCCcEEEeecCCCCCCC-
Q 040187 59 FDVSVDATRDLWFRLYSPTNTT---ATNLPVIVYFHGGGFAILAANSKV---YDDACRRLAVEVPAVVISVNYRRSPEH- 131 (299)
Q Consensus 59 ~~~~~~~~~~i~~~i~~P~~~~---~~~~p~vv~~HGGg~~~g~~~~~~---~~~~~~~la~~~g~~v~~~dyr~~~~~- 131 (299)
.++.+. .+.+.++-|.|...+ ....|.||++||-+- +...+. ..++...|+ +.|+.|+++|+......
T Consensus 40 ~~vv~~-~~~~~l~~y~~~~~~~~~~~~~~plllvhg~~~---~~~~~d~~~~~s~v~~L~-~~g~~v~~~d~G~~~~~~ 114 (994)
T PRK07868 40 FQIVES-VPMYRLRRYFPPDNRPGQPPVGPPVLMVHPMMM---SADMWDVTRDDGAVGILH-RAGLDPWVIDFGSPDKVE 114 (994)
T ss_pred CcEEEE-cCcEEEEEeCCCCccccccCCCCcEEEECCCCC---CccceecCCcccHHHHHH-HCCCEEEEEcCCCCChhH
Confidence 444444 446778888787531 134578999999431 211110 122467776 77999999998643211
Q ss_pred -CCCchhHHH----HHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 132 -RCPSQYEDG----IDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 132 -~~~~~~~D~----~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
.....+.|. .++++.+.+.. .+++.++|||+||.+++.++... .+.+++++|++.+.+|
T Consensus 115 ~~~~~~l~~~i~~l~~~l~~v~~~~-----------~~~v~lvG~s~GG~~a~~~aa~~-----~~~~v~~lvl~~~~~d 178 (994)
T PRK07868 115 GGMERNLADHVVALSEAIDTVKDVT-----------GRDVHLVGYSQGGMFCYQAAAYR-----RSKDIASIVTFGSPVD 178 (994)
T ss_pred cCccCCHHHHHHHHHHHHHHHHHhh-----------CCceEEEEEChhHHHHHHHHHhc-----CCCccceEEEEecccc
Confidence 111222222 33333333322 35799999999999999887642 3346888888766544
No 121
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=98.67 E-value=1.9e-07 Score=81.92 Aligned_cols=74 Identities=15% Similarity=0.191 Sum_probs=52.2
Q ss_pred CCcEEEeecCCCCCCCCC-CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCc-EEEEecChhHHHHHHHHHHhccCCCCCC
Q 040187 116 VPAVVISVNYRRSPEHRC-PSQYEDGIDALKFIDSSFIDIQNFPACADIKQ-CFLAGDSAGGNLAHNVAVLADGCNFSRL 193 (299)
Q Consensus 116 ~g~~v~~~dyr~~~~~~~-~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~-i~l~G~S~GG~lA~~~a~~~~~~~~~~~ 193 (299)
.+|.|+++|+|+.+...- +..++|..+.+..+.+.. +.++ ++|+||||||.+|+.+|.+ ++.
T Consensus 98 ~~~~Vi~~Dl~G~g~s~~~~~~~~~~a~dl~~ll~~l----------~l~~~~~lvG~SmGG~vA~~~A~~------~P~ 161 (343)
T PRK08775 98 ARFRLLAFDFIGADGSLDVPIDTADQADAIALLLDAL----------GIARLHAFVGYSYGALVGLQFASR------HPA 161 (343)
T ss_pred cccEEEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHc----------CCCcceEEEEECHHHHHHHHHHHH------ChH
Confidence 479999999998654321 122344444444444433 3345 5799999999999999998 666
Q ss_pred ccceEEEecccC
Q 040187 194 RLNGLIAIQPFF 205 (299)
Q Consensus 194 ~~~~~i~~~p~~ 205 (299)
+++++|++++..
T Consensus 162 ~V~~LvLi~s~~ 173 (343)
T PRK08775 162 RVRTLVVVSGAH 173 (343)
T ss_pred hhheEEEECccc
Confidence 899999998754
No 122
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.63 E-value=5.4e-07 Score=85.25 Aligned_cols=98 Identities=17% Similarity=0.141 Sum_probs=62.8
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC----------------------------
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP---------------------------- 134 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~---------------------------- 134 (299)
..|+||++||-+ ++. ..+..++..|+ +.||.|+++|+|+.++..+.
T Consensus 448 g~P~VVllHG~~---g~~--~~~~~lA~~La-~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn 521 (792)
T TIGR03502 448 GWPVVIYQHGIT---GAK--ENALAFAGTLA-AAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDN 521 (792)
T ss_pred CCcEEEEeCCCC---CCH--HHHHHHHHHHH-hCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccC
Confidence 468999999932 232 33677888887 67999999999976554221
Q ss_pred --chhHHHHHHHHHHHhhcCCCCCC--CCCCCCCcEEEEecChhHHHHHHHHHHhc
Q 040187 135 --SQYEDGIDALKFIDSSFIDIQNF--PACADIKQCFLAGDSAGGNLAHNVAVLAD 186 (299)
Q Consensus 135 --~~~~D~~~a~~~l~~~~~~~~~~--~~~~d~~~i~l~G~S~GG~lA~~~a~~~~ 186 (299)
+.+.|+......+.........+ -...+..+++++||||||.+++.++....
T Consensus 522 ~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~an 577 (792)
T TIGR03502 522 LRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYAN 577 (792)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhcC
Confidence 22355555555444100000000 00145689999999999999999997644
No 123
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.61 E-value=3.2e-07 Score=75.50 Aligned_cols=102 Identities=23% Similarity=0.197 Sum_probs=70.0
Q ss_pred cEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCC-CCCCCchhHHHHH-HHHHHHhhcCCCCCCCCCCC
Q 040187 85 PVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSP-EHRCPSQYEDGID-ALKFIDSSFIDIQNFPACAD 162 (299)
Q Consensus 85 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~-~~~~~~~~~D~~~-a~~~l~~~~~~~~~~~~~~d 162 (299)
+.|++||+|| |+. ..|..+++.+... .+.|..+++++.. ..+.+..+++..+ .++.+.... .
T Consensus 1 ~~lf~~p~~g---G~~--~~y~~la~~l~~~-~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~----------~ 64 (229)
T PF00975_consen 1 RPLFCFPPAG---GSA--SSYRPLARALPDD-VIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQ----------P 64 (229)
T ss_dssp -EEEEESSTT---CSG--GGGHHHHHHHTTT-EEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHT----------S
T ss_pred CeEEEEcCCc---cCH--HHHHHHHHhCCCC-eEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhC----------C
Confidence 3689999976 443 3488999988643 5889999988753 2222344444433 334444443 2
Q ss_pred CCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
..++.|+|||+||.+|..+|.++.+.+. .+..++++.+..
T Consensus 65 ~gp~~L~G~S~Gg~lA~E~A~~Le~~G~---~v~~l~liD~~~ 104 (229)
T PF00975_consen 65 EGPYVLAGWSFGGILAFEMARQLEEAGE---EVSRLILIDSPP 104 (229)
T ss_dssp SSSEEEEEETHHHHHHHHHHHHHHHTT----SESEEEEESCSS
T ss_pred CCCeeehccCccHHHHHHHHHHHHHhhh---ccCceEEecCCC
Confidence 2389999999999999999998876533 688999988543
No 124
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.59 E-value=1.4e-07 Score=81.52 Aligned_cols=110 Identities=18% Similarity=0.277 Sum_probs=66.4
Q ss_pred CCccEEEEEcCCccccccC-CCchhHHHHHHHHhh--CCcEEEeecCCCCCCCCCCchh-------HHHHHHHHHHHhhc
Q 040187 82 TNLPVIVYFHGGGFAILAA-NSKVYDDACRRLAVE--VPAVVISVNYRRSPEHRCPSQY-------EDGIDALKFIDSSF 151 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~-~~~~~~~~~~~la~~--~g~~v~~~dyr~~~~~~~~~~~-------~D~~~a~~~l~~~~ 151 (299)
.++|++|++|| |. ++. .......+...+... .++.|+++|+.......+.... ..+...+.+|.+..
T Consensus 69 ~~~pt~iiiHG--w~-~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~ 145 (331)
T PF00151_consen 69 PSKPTVIIIHG--WT-GSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNF 145 (331)
T ss_dssp TTSEEEEEE----TT--TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcC--cC-CcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhc
Confidence 47899999999 44 333 333455566656545 5899999999853333333322 33344556665433
Q ss_pred CCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 152 IDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 152 ~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
+++.++|.++|||.||++|..++..... ..++..+..+.|.-.
T Consensus 146 --------g~~~~~ihlIGhSLGAHvaG~aG~~~~~----~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 146 --------GVPPENIHLIGHSLGAHVAGFAGKYLKG----GGKIGRITGLDPAGP 188 (331)
T ss_dssp -----------GGGEEEEEETCHHHHHHHHHHHTTT-------SSEEEEES-B-T
T ss_pred --------CCChhHEEEEeeccchhhhhhhhhhccC----cceeeEEEecCcccc
Confidence 4789999999999999999999988654 136788888887643
No 125
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.58 E-value=1.5e-06 Score=73.06 Aligned_cols=116 Identities=15% Similarity=0.080 Sum_probs=66.3
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCC----CCCCCCCchhHHHHHHHHHHHhhcCCCCCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRR----SPEHRCPSQYEDGIDALKFIDSSFIDIQNFP 158 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~----~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~ 158 (299)
+..+||||-|=+= |-........++..+ ...++.|+.+..+- .+-.....-++|+.++++||+....
T Consensus 32 ~~~~llfIGGLtD--Gl~tvpY~~~La~aL-~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~------ 102 (303)
T PF08538_consen 32 APNALLFIGGLTD--GLLTVPYLPDLAEAL-EETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKG------ 102 (303)
T ss_dssp SSSEEEEE--TT----TT-STCHHHHHHHH-T-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS-------
T ss_pred CCcEEEEECCCCC--CCCCCchHHHHHHHh-ccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhc------
Confidence 4457888877211 111222234455555 46799999998664 3333444567899999999998741
Q ss_pred CCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCC
Q 040187 159 ACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 159 ~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 208 (299)
.....++|+|+|||-|..-++.+..+..... ....+.|+|+-+|+-|-.
T Consensus 103 g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~-~~~~VdG~ILQApVSDRE 151 (303)
T PF08538_consen 103 GHFGREKIVLMGHSTGCQDVLHYLSSPNPSP-SRPPVDGAILQAPVSDRE 151 (303)
T ss_dssp -----S-EEEEEECCHHHHHHHHHHH-TT----CCCEEEEEEEEE---TT
T ss_pred cccCCccEEEEecCCCcHHHHHHHhccCccc-cccceEEEEEeCCCCChh
Confidence 0125789999999999999999988754311 135899999999987644
No 126
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=98.57 E-value=1.8e-06 Score=68.05 Aligned_cols=105 Identities=13% Similarity=0.188 Sum_probs=73.5
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC-------CCchhHHHHHHHHHHHhhcCCC
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR-------CPSQYEDGIDALKFIDSSFIDI 154 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~-------~~~~~~D~~~a~~~l~~~~~~~ 154 (299)
+..-++|++||-- .++........+..++ +.|+.++.+|+++.+++. +....+|....++++.+..
T Consensus 31 gs~e~vvlcHGfr---S~Kn~~~~~~vA~~~e-~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~n--- 103 (269)
T KOG4667|consen 31 GSTEIVVLCHGFR---SHKNAIIMKNVAKALE-KEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSN--- 103 (269)
T ss_pred CCceEEEEeeccc---cccchHHHHHHHHHHH-hcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCc---
Confidence 3446899999921 2333322334556665 789999999999876542 3356699999999987632
Q ss_pred CCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCC
Q 040187 155 QNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 155 ~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 208 (299)
..==++.|||-||..++..+.++. .+.-+|..++-+++.
T Consensus 104 --------r~v~vi~gHSkGg~Vvl~ya~K~~-------d~~~viNcsGRydl~ 142 (269)
T KOG4667|consen 104 --------RVVPVILGHSKGGDVVLLYASKYH-------DIRNVINCSGRYDLK 142 (269)
T ss_pred --------eEEEEEEeecCccHHHHHHHHhhc-------CchheEEcccccchh
Confidence 122368899999999999999853 256777777766654
No 127
>PRK05855 short chain dehydrogenase; Validated
Probab=98.54 E-value=8.8e-07 Score=83.15 Aligned_cols=86 Identities=15% Similarity=0.148 Sum_probs=55.7
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCC-----chhHHHHHHHHHHHhhcCCCCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCP-----SQYEDGIDALKFIDSSFIDIQNF 157 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~-----~~~~D~~~a~~~l~~~~~~~~~~ 157 (299)
..|+||++||.+ ++ ...+..+...| ..+|.|+++|+|+.+.+..+ ..+++..+.+..+.+...
T Consensus 24 ~~~~ivllHG~~---~~--~~~w~~~~~~L--~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~----- 91 (582)
T PRK05855 24 DRPTVVLVHGYP---DN--HEVWDGVAPLL--ADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVS----- 91 (582)
T ss_pred CCCeEEEEcCCC---ch--HHHHHHHHHHh--hcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhC-----
Confidence 358999999954 22 23356677776 45899999999987654322 123343333333333321
Q ss_pred CCCCCCCcEEEEecChhHHHHHHHHHH
Q 040187 158 PACADIKQCFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 158 ~~~~d~~~i~l~G~S~GG~lA~~~a~~ 184 (299)
...++.|+|||+||.+++.++.+
T Consensus 92 ----~~~~~~lvGhS~Gg~~a~~~a~~ 114 (582)
T PRK05855 92 ----PDRPVHLLAHDWGSIQGWEAVTR 114 (582)
T ss_pred ----CCCcEEEEecChHHHHHHHHHhC
Confidence 12349999999999998877765
No 128
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=98.48 E-value=1.2e-05 Score=66.50 Aligned_cols=116 Identities=21% Similarity=0.232 Sum_probs=76.9
Q ss_pred CCCEEEE-EEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCc----hhHHH
Q 040187 66 TRDLWFR-LYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPS----QYEDG 140 (299)
Q Consensus 66 ~~~i~~~-i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~----~~~D~ 140 (299)
+..+.+. +|.-...++.+..+||=+||.. |+..+ +.-+...| .+.|+.++.++|++.+..+.+. .-++-
T Consensus 16 ~~~~~~~a~y~D~~~~gs~~gTVv~~hGsP---GSH~D--FkYi~~~l-~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er 89 (297)
T PF06342_consen 16 GKIVTVQAVYEDSLPSGSPLGTVVAFHGSP---GSHND--FKYIRPPL-DEAGIRFIGINYPGFGFTPGYPDQQYTNEER 89 (297)
T ss_pred CceEEEEEEEEecCCCCCCceeEEEecCCC---CCccc--hhhhhhHH-HHcCeEEEEeCCCCCCCCCCCcccccChHHH
Confidence 3445554 4544333334667999999954 45544 44445555 5899999999999875543321 11333
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 141 IDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 141 ~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
..-.+-+.+.. +++ ++++++|||.|+-.|+.++... +..|+++++|.
T Consensus 90 ~~~~~~ll~~l--------~i~-~~~i~~gHSrGcenal~la~~~--------~~~g~~lin~~ 136 (297)
T PF06342_consen 90 QNFVNALLDEL--------GIK-GKLIFLGHSRGCENALQLAVTH--------PLHGLVLINPP 136 (297)
T ss_pred HHHHHHHHHHc--------CCC-CceEEEEeccchHHHHHHHhcC--------ccceEEEecCC
Confidence 44445555544 255 8899999999999999999862 36789998875
No 129
>PRK04940 hypothetical protein; Provisional
Probab=98.46 E-value=2.8e-06 Score=66.13 Aligned_cols=112 Identities=15% Similarity=0.142 Sum_probs=60.0
Q ss_pred CcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChHHHhhcC-CCCcchhhHHHHHH-------Hc
Q 040187 164 KQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTESEMRFQR-DPLVGLKLTDWMWK-------AF 235 (299)
Q Consensus 164 ~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------~~ 235 (299)
+++.|+|.|+||+.|..++.+. .+ -.|+++|.+.............. ...++..-..++.. .+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~--------g~-~aVLiNPAv~P~~~L~~~ig~~~~y~~~~~~h~~eL~~~~p~r~~vl 130 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLC--------GI-RQVIFNPNLFPEENMEGKIDRPEEYADIATKCVTNFREKNRDRCLVI 130 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHH--------CC-CEEEECCCCChHHHHHHHhCCCcchhhhhHHHHHHhhhcCcccEEEE
Confidence 4699999999999999999884 23 35667887754321111111000 11111111111110 01
Q ss_pred CCCCCCCCcHHHHHHHHHHHHCCCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHHh
Q 040187 236 LPEGSNRDHPAANRYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICS 295 (299)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~ 295 (299)
+..+. ... .+.+..+....-.+..+.+|++|.|.. .++.+..|.+|++.
T Consensus 131 lq~gD----EvL-Dyr~a~~~y~~~y~~~v~~GGdH~f~~------fe~~l~~I~~F~~~ 179 (180)
T PRK04940 131 LSRND----EVL-DSQRTAEELHPYYEIVWDEEQTHKFKN------ISPHLQRIKAFKTL 179 (180)
T ss_pred EeCCC----ccc-CHHHHHHHhccCceEEEECCCCCCCCC------HHHHHHHHHHHHhc
Confidence 11111 111 223333333333358889999998865 46789999999853
No 130
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.46 E-value=4.1e-06 Score=70.84 Aligned_cols=117 Identities=19% Similarity=0.196 Sum_probs=77.9
Q ss_pred eEEEEEEcCCCCEEEEEE---ecCCCCCCCccEEEEEcCCccccccCCC-chhHHHHHHHHhhCCcEEEeecCCCCCCCC
Q 040187 57 TSFDVSVDATRDLWFRLY---SPTNTTATNLPVIVYFHGGGFAILAANS-KVYDDACRRLAVEVPAVVISVNYRRSPEHR 132 (299)
Q Consensus 57 ~~~~~~~~~~~~i~~~i~---~P~~~~~~~~p~vv~~HGGg~~~g~~~~-~~~~~~~~~la~~~g~~v~~~dyr~~~~~~ 132 (299)
..+.+++.. +++.++-. .|.. ++..-|+++-|-|...-...- ...+.....++.+.+.+|+.++||+-+.+.
T Consensus 111 ~~kRv~Iq~-D~~~IDt~~I~~~~a---~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~ 186 (365)
T PF05677_consen 111 SVKRVPIQY-DGVKIDTMAIHQPEA---KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSST 186 (365)
T ss_pred ceeeEEEee-CCEEEEEEEeeCCCC---CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCC
Confidence 345555552 34555432 2432 456789999996543222100 012345678888999999999999865444
Q ss_pred CC----chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHH
Q 040187 133 CP----SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 133 ~~----~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~ 184 (299)
.+ ..+.|..+.++||+++.. |+.+++|++.|||.||.++..+...
T Consensus 187 G~~s~~dLv~~~~a~v~yL~d~~~-------G~ka~~Ii~yG~SLGG~Vqa~AL~~ 235 (365)
T PF05677_consen 187 GPPSRKDLVKDYQACVRYLRDEEQ-------GPKAKNIILYGHSLGGGVQAEALKK 235 (365)
T ss_pred CCCCHHHHHHHHHHHHHHHHhccc-------CCChheEEEeeccccHHHHHHHHHh
Confidence 33 455777788888887542 5789999999999999998875554
No 131
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=98.43 E-value=1.1e-06 Score=68.55 Aligned_cols=99 Identities=17% Similarity=0.187 Sum_probs=69.4
Q ss_pred cEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCC-----CCCCCch--hHHHHHHHHHHHhhcCCCCCC
Q 040187 85 PVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSP-----EHRCPSQ--YEDGIDALKFIDSSFIDIQNF 157 (299)
Q Consensus 85 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~-----~~~~~~~--~~D~~~a~~~l~~~~~~~~~~ 157 (299)
-.|+.+.| ..|+...+ +...+..+-....+++++.|=++.+ +..|+.. .+|+..|+..+...
T Consensus 43 ~~iLlipG---alGs~~tD-f~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aL------- 111 (277)
T KOG2984|consen 43 NYILLIPG---ALGSYKTD-FPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEAL------- 111 (277)
T ss_pred ceeEeccc---cccccccc-CCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHh-------
Confidence 35677777 23444333 4555555555667999999988654 4445443 47999998887664
Q ss_pred CCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 158 PACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 158 ~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
+.+++.|+|+|-||..|+.+|.+ .+..+...|.+...
T Consensus 112 ----k~~~fsvlGWSdGgiTalivAak------~~e~v~rmiiwga~ 148 (277)
T KOG2984|consen 112 ----KLEPFSVLGWSDGGITALIVAAK------GKEKVNRMIIWGAA 148 (277)
T ss_pred ----CCCCeeEeeecCCCeEEEEeecc------Chhhhhhheeeccc
Confidence 46889999999999999999988 44566677766554
No 132
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.36 E-value=2.6e-05 Score=69.24 Aligned_cols=73 Identities=22% Similarity=0.152 Sum_probs=53.4
Q ss_pred CCcEEEeecCCCCCC-----------------C------CCC-chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEE-EEe
Q 040187 116 VPAVVISVNYRRSPE-----------------H------RCP-SQYEDGIDALKFIDSSFIDIQNFPACADIKQCF-LAG 170 (299)
Q Consensus 116 ~g~~v~~~dyr~~~~-----------------~------~~~-~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~-l~G 170 (299)
.-|-|+++|.-++.. . .|| ..++|..+++..+.+.. ..+++. |+|
T Consensus 98 ~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~l----------gi~~~~~vvG 167 (389)
T PRK06765 98 NKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSL----------GIARLHAVMG 167 (389)
T ss_pred CceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHc----------CCCCceEEEE
Confidence 358899999775321 1 244 45678777777777654 346775 999
Q ss_pred cChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 171 DSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 171 ~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
+||||.+|+.+|.+ .+..++.+|+++..
T Consensus 168 ~SmGG~ial~~a~~------~P~~v~~lv~ia~~ 195 (389)
T PRK06765 168 PSMGGMQAQEWAVH------YPHMVERMIGVIGN 195 (389)
T ss_pred ECHHHHHHHHHHHH------ChHhhheEEEEecC
Confidence 99999999999998 66678898888643
No 133
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.36 E-value=9.4e-06 Score=60.98 Aligned_cols=102 Identities=22% Similarity=0.323 Sum_probs=69.3
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCC-----C----CCCCCCchhHHH-HHHHHHHHhhcC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRR-----S----PEHRCPSQYEDG-IDALKFIDSSFI 152 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~-----~----~~~~~~~~~~D~-~~a~~~l~~~~~ 152 (299)
..-+||+-||.| ++.++......+..++ ..|+.|..+++.. . |..+ ...++++ ..++.-|.+..
T Consensus 13 ~~~tilLaHGAG---asmdSt~m~~~a~~la-~~G~~vaRfefpYma~Rrtg~rkPp~~-~~t~~~~~~~~~aql~~~l- 86 (213)
T COG3571 13 APVTILLAHGAG---ASMDSTSMTAVAAALA-RRGWLVARFEFPYMAARRTGRRKPPPG-SGTLNPEYIVAIAQLRAGL- 86 (213)
T ss_pred CCEEEEEecCCC---CCCCCHHHHHHHHHHH-hCceeEEEeecchhhhccccCCCCcCc-cccCCHHHHHHHHHHHhcc-
Confidence 345788899977 4666666677788887 7899999998642 1 1111 1234444 44455555543
Q ss_pred CCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEe-cccC
Q 040187 153 DIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAI-QPFF 205 (299)
Q Consensus 153 ~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~-~p~~ 205 (299)
+..++++.|+||||.+|..++.... ..+.+++++ ||+.
T Consensus 87 ---------~~gpLi~GGkSmGGR~aSmvade~~------A~i~~L~clgYPfh 125 (213)
T COG3571 87 ---------AEGPLIIGGKSMGGRVASMVADELQ------APIDGLVCLGYPFH 125 (213)
T ss_pred ---------cCCceeeccccccchHHHHHHHhhc------CCcceEEEecCccC
Confidence 5678999999999999999997632 248888876 4554
No 134
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.35 E-value=2.1e-06 Score=70.24 Aligned_cols=71 Identities=28% Similarity=0.272 Sum_probs=58.1
Q ss_pred cEEEeecCCCCCCCCC------C-chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCC
Q 040187 118 AVVISVNYRRSPEHRC------P-SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNF 190 (299)
Q Consensus 118 ~~v~~~dyr~~~~~~~------~-~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~ 190 (299)
|.|+++|.|+.+...- + ...+|..+.++.+++.. ..+++.++|||+||.+++.++..
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l----------~~~~~~~vG~S~Gg~~~~~~a~~------ 64 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREAL----------GIKKINLVGHSMGGMLALEYAAQ------ 64 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHH----------TTSSEEEEEETHHHHHHHHHHHH------
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHh----------CCCCeEEEEECCChHHHHHHHHH------
Confidence 5799999998776651 1 34588888899988876 34559999999999999999998
Q ss_pred CCCccceEEEeccc
Q 040187 191 SRLRLNGLIAIQPF 204 (299)
Q Consensus 191 ~~~~~~~~i~~~p~ 204 (299)
.+.+++++|+.++.
T Consensus 65 ~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 65 YPERVKKLVLISPP 78 (230)
T ss_dssp SGGGEEEEEEESES
T ss_pred CchhhcCcEEEeee
Confidence 66689999999985
No 135
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.33 E-value=8.5e-06 Score=66.80 Aligned_cols=110 Identities=15% Similarity=0.165 Sum_probs=65.6
Q ss_pred ccEEEEEcCCccccccCCCchhHHHHHHHH-------hhCCcEEEeecCCCCCC----CCCCchhHHHHHHHHHHHhhcC
Q 040187 84 LPVIVYFHGGGFAILAANSKVYDDACRRLA-------VEVPAVVISVNYRRSPE----HRCPSQYEDGIDALKFIDSSFI 152 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~~~~~~~~~~~la-------~~~g~~v~~~dyr~~~~----~~~~~~~~D~~~a~~~l~~~~~ 152 (299)
...|||+||-+ |+.. ..+.+...+. ....+.++++||..... .......+-+..+++.+.+...
T Consensus 4 g~pVlFIhG~~---Gs~~--q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~ 78 (225)
T PF07819_consen 4 GIPVLFIHGNA---GSYK--QVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYK 78 (225)
T ss_pred CCEEEEECcCC---CCHh--HHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhh
Confidence 45689999933 3322 1233333321 12358899999875321 1122333455566666665441
Q ss_pred CCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 153 DIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 153 ~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
.....+++|+++||||||-+|..+...... ....++.+|.++....
T Consensus 79 -----~~~~~~~~vilVgHSmGGlvar~~l~~~~~---~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 79 -----SNRPPPRSVILVGHSMGGLVARSALSLPNY---DPDSVKTIITLGTPHR 124 (225)
T ss_pred -----hccCCCCceEEEEEchhhHHHHHHHhcccc---ccccEEEEEEEcCCCC
Confidence 112467899999999999998888765332 1246889988765443
No 136
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.31 E-value=2.6e-05 Score=66.57 Aligned_cols=92 Identities=20% Similarity=0.053 Sum_probs=57.1
Q ss_pred HHHHHHHHhhCCcEEEeecCCCCCCCCCCchh---HHHHHHHHHHHhhcCCCCCCCCCCC-CCcEEEEecChhHHHHHHH
Q 040187 106 DDACRRLAVEVPAVVISVNYRRSPEHRCPSQY---EDGIDALKFIDSSFIDIQNFPACAD-IKQCFLAGDSAGGNLAHNV 181 (299)
Q Consensus 106 ~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~---~D~~~a~~~l~~~~~~~~~~~~~~d-~~~i~l~G~S~GG~lA~~~ 181 (299)
..++..+. +.||+|+++||-+-+. +|.... .++.++++..++... ..++. ..+++++|+|.||+-++..
T Consensus 16 ~~~l~~~L-~~GyaVv~pDY~Glg~-~y~~~~~~a~avLD~vRAA~~~~~-----~~gl~~~~~v~l~GySqGG~Aa~~A 88 (290)
T PF03583_consen 16 APFLAAWL-ARGYAVVAPDYEGLGT-PYLNGRSEAYAVLDAVRAARNLPP-----KLGLSPSSRVALWGYSQGGQAALWA 88 (290)
T ss_pred HHHHHHHH-HCCCEEEecCCCCCCC-cccCcHhHHHHHHHHHHHHHhccc-----ccCCCCCCCEEEEeeCccHHHHHHH
Confidence 44566665 8899999999976543 554333 344444444444331 12332 4689999999999998877
Q ss_pred HHHhccCCCCCCc--cceEEEecccC
Q 040187 182 AVLADGCNFSRLR--LNGLIAIQPFF 205 (299)
Q Consensus 182 a~~~~~~~~~~~~--~~~~i~~~p~~ 205 (299)
+....+-. .... +.|+++..|..
T Consensus 89 A~l~~~YA-peL~~~l~Gaa~gg~~~ 113 (290)
T PF03583_consen 89 AELAPSYA-PELNRDLVGAAAGGPPA 113 (290)
T ss_pred HHHhHHhC-cccccceeEEeccCCcc
Confidence 75433221 2224 77888777644
No 137
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.30 E-value=2.3e-06 Score=66.78 Aligned_cols=102 Identities=22% Similarity=0.298 Sum_probs=73.3
Q ss_pred cEEEEEcC-CccccccCCCchhHHHHHHHHhhCCcEEEeecCCCC-CCCCCC-chhHHHHHHHHHHHhhcCCCCCCCCCC
Q 040187 85 PVIVYFHG-GGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRS-PEHRCP-SQYEDGIDALKFIDSSFIDIQNFPACA 161 (299)
Q Consensus 85 p~vv~~HG-Gg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~-~~~~~~-~~~~D~~~a~~~l~~~~~~~~~~~~~~ 161 (299)
-++|++-| |||... -..++..|+ +.|+.|+.+|-... -..+-| ....|+..+++...+..
T Consensus 3 t~~v~~SGDgGw~~~------d~~~a~~l~-~~G~~VvGvdsl~Yfw~~rtP~~~a~Dl~~~i~~y~~~w---------- 65 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDL------DKQIAEALA-KQGVPVVGVDSLRYFWSERTPEQTAADLARIIRHYRARW---------- 65 (192)
T ss_pred EEEEEEeCCCCchhh------hHHHHHHHH-HCCCeEEEechHHHHhhhCCHHHHHHHHHHHHHHHHHHh----------
Confidence 35777888 666311 256788887 88999999994321 112223 34578888888887765
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 162 DIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 162 d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
..++++|+|.|.|+-+...+..+++.. ...+++.+++++|..
T Consensus 66 ~~~~vvLiGYSFGADvlP~~~nrLp~~--~r~~v~~v~Ll~p~~ 107 (192)
T PF06057_consen 66 GRKRVVLIGYSFGADVLPFIYNRLPAA--LRARVAQVVLLSPST 107 (192)
T ss_pred CCceEEEEeecCCchhHHHHHhhCCHH--HHhheeEEEEeccCC
Confidence 468999999999999888888776543 234799999998853
No 138
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.28 E-value=1.3e-05 Score=73.05 Aligned_cols=136 Identities=12% Similarity=0.111 Sum_probs=87.0
Q ss_pred ceEEEEEEcCCCCEEEEEEecCCCCCCCccEEEEEcC---CccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCC-
Q 040187 56 VTSFDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHG---GGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEH- 131 (299)
Q Consensus 56 ~~~~~~~~~~~~~i~~~i~~P~~~~~~~~p~vv~~HG---Gg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~- 131 (299)
.+..+|.+. .+-+.+.-|.|.+.+..+.| ||+++. ..|+ .+... ..++++.+. +.|+.|+.+|++.-...
T Consensus 189 ~TPg~VV~~-n~l~eLiqY~P~te~v~~~P-LLIVPp~INK~YI-lDL~P--~~SlVr~lv-~qG~~VflIsW~nP~~~~ 262 (560)
T TIGR01839 189 TTEGAVVFR-NEVLELIQYKPITEQQHARP-LLVVPPQINKFYI-FDLSP--EKSFVQYCL-KNQLQVFIISWRNPDKAH 262 (560)
T ss_pred CCCCceeEE-CCceEEEEeCCCCCCcCCCc-EEEechhhhhhhe-eecCC--cchHHHHHH-HcCCeEEEEeCCCCChhh
Confidence 344555554 45567777888765323445 555676 1221 23222 367788887 88999999999964322
Q ss_pred ---CCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCC-CccceEEEecccCCC
Q 040187 132 ---RCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSR-LRLNGLIAIQPFFGG 207 (299)
Q Consensus 132 ---~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~-~~~~~~i~~~p~~~~ 207 (299)
.+...++.+.+|++.+++.. ..++|.++|+|+||.+++.++..+... ++ .+++.++++...+|.
T Consensus 263 r~~~ldDYv~~i~~Ald~V~~~t----------G~~~vnl~GyC~GGtl~a~~~a~~aA~--~~~~~V~sltllatplDf 330 (560)
T TIGR01839 263 REWGLSTYVDALKEAVDAVRAIT----------GSRDLNLLGACAGGLTCAALVGHLQAL--GQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhc----------CCCCeeEEEECcchHHHHHHHHHHHhc--CCCCceeeEEeeeccccc
Confidence 22344456677777777764 467899999999999999632222111 33 269999998888775
Q ss_pred CC
Q 040187 208 EE 209 (299)
Q Consensus 208 ~~ 209 (299)
..
T Consensus 331 ~~ 332 (560)
T TIGR01839 331 TM 332 (560)
T ss_pred CC
Confidence 53
No 139
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.27 E-value=1.5e-05 Score=68.22 Aligned_cols=100 Identities=19% Similarity=0.172 Sum_probs=69.1
Q ss_pred EEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHH-HHHHHhhCCcEEEeecCCCC----CCC----CC------
Q 040187 69 LWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDA-CRRLAVEVPAVVISVNYRRS----PEH----RC------ 133 (299)
Q Consensus 69 i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~-~~~la~~~g~~v~~~dyr~~----~~~----~~------ 133 (299)
-.+.+..|+......+|++|++.|.| +...+.-..+ ++.|..+ |+..+.+.-... |.. ..
T Consensus 77 a~~~~~~P~~~~~~~rp~~IhLagTG----Dh~f~rR~~l~a~pLl~~-gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl 151 (348)
T PF09752_consen 77 ARFQLLLPKRWDSPYRPVCIHLAGTG----DHGFWRRRRLMARPLLKE-GIASLILENPYYGQRKPKDQRRSSLRNVSDL 151 (348)
T ss_pred eEEEEEECCccccCCCceEEEecCCC----ccchhhhhhhhhhHHHHc-CcceEEEecccccccChhHhhcccccchhHH
Confidence 45566678765335789999999965 3332222233 7778744 999888773322 111 00
Q ss_pred ----CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHH
Q 040187 134 ----PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 134 ----~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~ 184 (299)
-+.+.++...+.|+.+++ ..++++.|.||||++|..+|..
T Consensus 152 ~~~g~~~i~E~~~Ll~Wl~~~G-----------~~~~g~~G~SmGG~~A~laa~~ 195 (348)
T PF09752_consen 152 FVMGRATILESRALLHWLEREG-----------YGPLGLTGISMGGHMAALAASN 195 (348)
T ss_pred HHHHhHHHHHHHHHHHHHHhcC-----------CCceEEEEechhHhhHHhhhhc
Confidence 135678888999998875 3589999999999999998876
No 140
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.26 E-value=4.8e-06 Score=56.15 Aligned_cols=57 Identities=28% Similarity=0.399 Sum_probs=44.9
Q ss_pred CCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC
Q 040187 67 RDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR 132 (299)
Q Consensus 67 ~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~ 132 (299)
..+.++.|.|+.. ++.+|+++||-+ .....|..++..|+ +.||.|+..|+|+.+.+.
T Consensus 2 ~~L~~~~w~p~~~---~k~~v~i~HG~~-----eh~~ry~~~a~~L~-~~G~~V~~~D~rGhG~S~ 58 (79)
T PF12146_consen 2 TKLFYRRWKPENP---PKAVVVIVHGFG-----EHSGRYAHLAEFLA-EQGYAVFAYDHRGHGRSE 58 (79)
T ss_pred cEEEEEEecCCCC---CCEEEEEeCCcH-----HHHHHHHHHHHHHH-hCCCEEEEECCCcCCCCC
Confidence 4577888888754 579999999943 22335888999998 789999999999876654
No 141
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.16 E-value=2.2e-05 Score=61.45 Aligned_cols=92 Identities=20% Similarity=0.179 Sum_probs=51.4
Q ss_pred EEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcE
Q 040187 87 IVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQC 166 (299)
Q Consensus 87 vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i 166 (299)
|+++||=+ ++.....+..+.+.+. .. +.|-.++. ..| .+++-...++--.. ...+++
T Consensus 1 v~IvhG~~---~s~~~HW~~wl~~~l~-~~-~~V~~~~~------~~P-~~~~W~~~l~~~i~-----------~~~~~~ 57 (171)
T PF06821_consen 1 VLIVHGYG---GSPPDHWQPWLERQLE-NS-VRVEQPDW------DNP-DLDEWVQALDQAID-----------AIDEPT 57 (171)
T ss_dssp EEEE--TT---SSTTTSTHHHHHHHHT-TS-EEEEEC--------TS---HHHHHHHHHHCCH-----------C-TTTE
T ss_pred CEEeCCCC---CCCccHHHHHHHHhCC-CC-eEEecccc------CCC-CHHHHHHHHHHHHh-----------hcCCCe
Confidence 67899933 4555555666666664 33 66655544 111 22333333222211 123569
Q ss_pred EEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 167 FLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
+++|||.|+..++..+... ...+++|+++++|+-.
T Consensus 58 ilVaHSLGc~~~l~~l~~~-----~~~~v~g~lLVAp~~~ 92 (171)
T PF06821_consen 58 ILVAHSLGCLTALRWLAEQ-----SQKKVAGALLVAPFDP 92 (171)
T ss_dssp EEEEETHHHHHHHHHHHHT-----CCSSEEEEEEES--SC
T ss_pred EEEEeCHHHHHHHHHHhhc-----ccccccEEEEEcCCCc
Confidence 9999999999999988521 4458999999999853
No 142
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.07 E-value=0.00011 Score=61.95 Aligned_cols=118 Identities=14% Similarity=0.186 Sum_probs=75.7
Q ss_pred ccEEEEEcCCccccccCCCchhHHHHHHHHhh--CCcEEEeecCCCCCCCCC---------CchhH-HHHHHHHHHHhhc
Q 040187 84 LPVIVYFHGGGFAILAANSKVYDDACRRLAVE--VPAVVISVNYRRSPEHRC---------PSQYE-DGIDALKFIDSSF 151 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~--~g~~v~~~dyr~~~~~~~---------~~~~~-D~~~a~~~l~~~~ 151 (299)
.+++++|.|-. .-...|..++..|... ..+.|+++.+.+....+. .-.++ .+...++++.+..
T Consensus 2 ~~li~~IPGNP-----Glv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGNP-----GLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCCC-----ChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHh
Confidence 46889999943 1233478888888866 489999999886421111 11222 2333444444433
Q ss_pred CCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChHH
Q 040187 152 IDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTESE 214 (299)
Q Consensus 152 ~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~ 214 (299)
. .......+++++|||.|+++++.+..+..+ ....+..++++.|.+..-..+++.
T Consensus 77 ~-----~~~~~~~~liLiGHSIGayi~levl~r~~~---~~~~V~~~~lLfPTi~~ia~Sp~G 131 (266)
T PF10230_consen 77 P-----QKNKPNVKLILIGHSIGAYIALEVLKRLPD---LKFRVKKVILLFPTIEDIAKSPNG 131 (266)
T ss_pred h-----hhcCCCCcEEEEeCcHHHHHHHHHHHhccc---cCCceeEEEEeCCccccccCCchh
Confidence 1 111145789999999999999999998651 124789999999987654444443
No 143
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.01 E-value=7.3e-05 Score=61.49 Aligned_cols=99 Identities=22% Similarity=0.273 Sum_probs=60.4
Q ss_pred ccEEEEEcCCccccccCCCchhHHHHHHHHhhC-CcEEEeecCCCCCCCC--CCchhHHHHHHHHHHHhhcCCCCCCCCC
Q 040187 84 LPVIVYFHGGGFAILAANSKVYDDACRRLAVEV-PAVVISVNYRRSPEHR--CPSQYEDGIDALKFIDSSFIDIQNFPAC 160 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~-g~~v~~~dyr~~~~~~--~~~~~~D~~~a~~~l~~~~~~~~~~~~~ 160 (299)
.|.++++||++. +... +......+.... .+.++.+|.|+.+... .. ......+.+..+.+..
T Consensus 21 ~~~i~~~hg~~~---~~~~--~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~--------- 85 (282)
T COG0596 21 GPPLVLLHGFPG---SSSV--WRPVFKVLPALAARYRVIAPDLRGHGRSDPAGY-SLSAYADDLAALLDAL--------- 85 (282)
T ss_pred CCeEEEeCCCCC---chhh--hHHHHHHhhccccceEEEEecccCCCCCCcccc-cHHHHHHHHHHHHHHh---------
Confidence 458999999653 2211 222112222121 1899999999766554 11 1111123333333332
Q ss_pred CCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 161 ADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 161 ~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
...++.++|||+||.+++.++.+ .+..+++++++++.
T Consensus 86 -~~~~~~l~G~S~Gg~~~~~~~~~------~p~~~~~~v~~~~~ 122 (282)
T COG0596 86 -GLEKVVLVGHSMGGAVALALALR------HPDRVRGLVLIGPA 122 (282)
T ss_pred -CCCceEEEEecccHHHHHHHHHh------cchhhheeeEecCC
Confidence 23449999999999999999998 45578888888864
No 144
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.94 E-value=0.00044 Score=55.10 Aligned_cols=109 Identities=19% Similarity=0.146 Sum_probs=62.7
Q ss_pred EEEecChhHHHHHHHHHHhc--cCCCCCCccceEEEecccCCCCCCChHHHhhc--CCCCcchhhHHHHHHHcCCCCCCC
Q 040187 167 FLAGDSAGGNLAHNVAVLAD--GCNFSRLRLNGLIAIQPFFGGEERTESEMRFQ--RDPLVGLKLTDWMWKAFLPEGSNR 242 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~~~~--~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 242 (299)
+|.|+|.|+.++..++.... ......+.++.+|+++++.............. ..|. ..+.+..|.
T Consensus 107 GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~~~~~~~~~i~~PS-----------LHi~G~~D~ 175 (230)
T KOG2551|consen 107 GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKLDESAYKRPLSTPS-----------LHIFGETDT 175 (230)
T ss_pred cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchhhhhhhccCCCCCe-----------eEEecccce
Confidence 79999999999999998322 11124457899999999875432111111110 1111 222334455
Q ss_pred CcHHH--HHHHHHHHHCCCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHHhhh
Q 040187 243 DHPAA--NRYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICSQA 297 (299)
Q Consensus 243 ~~~~~--~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~~~ 297 (299)
..|.. ..+++..+++ ++...+| +|.... .....+.+.+||+..+
T Consensus 176 iv~~~~s~~L~~~~~~a----~vl~Hpg-gH~VP~------~~~~~~~i~~fi~~~~ 221 (230)
T KOG2551|consen 176 IVPSERSEQLAESFKDA----TVLEHPG-GHIVPN------KAKYKEKIADFIQSFL 221 (230)
T ss_pred eecchHHHHHHHhcCCC----eEEecCC-CccCCC------chHHHHHHHHHHHHHH
Confidence 55543 2455554433 5555554 785433 4578888888888754
No 145
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.82 E-value=0.0002 Score=59.08 Aligned_cols=111 Identities=15% Similarity=0.123 Sum_probs=63.6
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCc--EEEeecCCCCCCC-CCCc-------hhHHHHHHHHHHHhhc
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPA--VVISVNYRRSPEH-RCPS-------QYEDGIDALKFIDSSF 151 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~--~v~~~dyr~~~~~-~~~~-------~~~D~~~a~~~l~~~~ 151 (299)
....++||+||-. .....-..-+..+....++ .++.+.++-.+.. .+.. ...+....++.|.+.
T Consensus 16 ~~~~vlvfVHGyn-----~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~- 89 (233)
T PF05990_consen 16 PDKEVLVFVHGYN-----NSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARA- 89 (233)
T ss_pred CCCeEEEEEeCCC-----CCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhc-
Confidence 4678999999922 1111011123334445555 5777777643321 1111 112223333333333
Q ss_pred CCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCC---CCccceEEEecccCCC
Q 040187 152 IDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFS---RLRLNGLIAIQPFFGG 207 (299)
Q Consensus 152 ~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~---~~~~~~~i~~~p~~~~ 207 (299)
....+|.+++||||+.+.+............ ...+..+++.+|=++.
T Consensus 90 ---------~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 90 ---------PGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred ---------cCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 2468999999999999999987775543211 2378899999986654
No 146
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.81 E-value=0.00025 Score=58.93 Aligned_cols=102 Identities=19% Similarity=0.099 Sum_probs=67.0
Q ss_pred cEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCC-CCCchhHHHHHHHHH-HHhhcCCCCCCCCCCC
Q 040187 85 PVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEH-RCPSQYEDGIDALKF-IDSSFIDIQNFPACAD 162 (299)
Q Consensus 85 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~-~~~~~~~D~~~a~~~-l~~~~~~~~~~~~~~d 162 (299)
|.+++||+++ |. ...|..+...+. .-..|+..++++.... .....++|..+.+-- +++.. .
T Consensus 1 ~pLF~fhp~~---G~--~~~~~~L~~~l~--~~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~Q----------P 63 (257)
T COG3319 1 PPLFCFHPAG---GS--VLAYAPLAAALG--PLLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRVQ----------P 63 (257)
T ss_pred CCEEEEcCCC---Cc--HHHHHHHHHHhc--cCceeeccccCcccccccccCCHHHHHHHHHHHHHHhC----------C
Confidence 5789999954 23 222566666664 2378888888865321 222445555444333 33322 3
Q ss_pred CCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
...+.|.|+|+||.+|..+|.++...+ ..++.++++.+...
T Consensus 64 ~GPy~L~G~S~GG~vA~evA~qL~~~G---~~Va~L~llD~~~~ 104 (257)
T COG3319 64 EGPYVLLGWSLGGAVAFEVAAQLEAQG---EEVAFLGLLDAVPP 104 (257)
T ss_pred CCCEEEEeeccccHHHHHHHHHHHhCC---CeEEEEEEeccCCC
Confidence 457999999999999999999987654 26788888877665
No 147
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=97.81 E-value=0.0086 Score=51.62 Aligned_cols=128 Identities=14% Similarity=0.170 Sum_probs=80.7
Q ss_pred EEEcCCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCC-----C------
Q 040187 61 VSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRS-----P------ 129 (299)
Q Consensus 61 ~~~~~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~-----~------ 129 (299)
+.+..++.-..-+|+|.... ....+||++||-|- +.++...-..+++-..+.|+.++++....- |
T Consensus 65 ~~L~~~~~~flaL~~~~~~~-~~~G~vIilp~~g~---~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~ 140 (310)
T PF12048_consen 65 QWLQAGEERFLALWRPANSA-KPQGAVIILPDWGE---HPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEA 140 (310)
T ss_pred EEeecCCEEEEEEEecccCC-CCceEEEEecCCCC---CCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCC
Confidence 34455566667788888653 56789999999552 444433444455544699999999776530 0
Q ss_pred -------CCCCC----------------------chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHH
Q 040187 130 -------EHRCP----------------------SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHN 180 (299)
Q Consensus 130 -------~~~~~----------------------~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~ 180 (299)
..... ....-+.+++.++.++. ..+|+|+|++.|+++++.
T Consensus 141 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~-----------~~~ivlIg~G~gA~~~~~ 209 (310)
T PF12048_consen 141 EEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQG-----------GKNIVLIGHGTGAGWAAR 209 (310)
T ss_pred CCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhcC-----------CceEEEEEeChhHHHHHH
Confidence 00000 01122333444444433 356999999999999998
Q ss_pred HHHHhccCCCCCCccceEEEecccCCCC
Q 040187 181 VAVLADGCNFSRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 181 ~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 208 (299)
+.... ....+.++|++++.....
T Consensus 210 ~la~~-----~~~~~daLV~I~a~~p~~ 232 (310)
T PF12048_consen 210 YLAEK-----PPPMPDALVLINAYWPQP 232 (310)
T ss_pred HHhcC-----CCcccCeEEEEeCCCCcc
Confidence 88753 233588999999976544
No 148
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.80 E-value=0.00048 Score=60.23 Aligned_cols=122 Identities=27% Similarity=0.268 Sum_probs=80.4
Q ss_pred CCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCC---C------------
Q 040187 66 TRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSP---E------------ 130 (299)
Q Consensus 66 ~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~---~------------ 130 (299)
...+.+++...... ....+|+++-|-| ++.+...++.....+|...+++|+.++|.... .
T Consensus 19 ~sKLEyri~ydd~K--e~kaIvfiI~GfG---~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~~~~~D~ 93 (403)
T PF11144_consen 19 ESKLEYRISYDDEK--EIKAIVFIIPGFG---ADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFYFDDIDK 93 (403)
T ss_pred cceeeEEeecCCCC--CceEEEEEeCCcC---CCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhcCCHHHH
Confidence 35677777554433 3445566666644 56666666778888999999999999997310 0
Q ss_pred ----------------------------------------CCCC-----------------------chhHHHHHHHHHH
Q 040187 131 ----------------------------------------HRCP-----------------------SQYEDGIDALKFI 147 (299)
Q Consensus 131 ----------------------------------------~~~~-----------------------~~~~D~~~a~~~l 147 (299)
..++ .+.-|...|+.++
T Consensus 94 ~iLk~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~INAl~~l 173 (403)
T PF11144_consen 94 EILKKSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDIINALLDL 173 (403)
T ss_pred HHHHHHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHHHHHHHH
Confidence 0000 1235777888888
Q ss_pred HhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 148 DSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 148 ~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
.++.. .. .+.-+++++|+|-||++|...|.- .|-.+.+++--|++
T Consensus 174 ~k~~~-----~~-~~~lp~I~~G~s~G~yla~l~~k~------aP~~~~~~iDns~~ 218 (403)
T PF11144_consen 174 KKIFP-----KN-GGGLPKIYIGSSHGGYLAHLCAKI------APWLFDGVIDNSSY 218 (403)
T ss_pred HHhhh-----cc-cCCCcEEEEecCcHHHHHHHHHhh------CccceeEEEecCcc
Confidence 77753 11 123489999999999999999876 44456777766554
No 149
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=97.78 E-value=0.0093 Score=53.03 Aligned_cols=126 Identities=8% Similarity=-0.058 Sum_probs=75.4
Q ss_pred CCCEEEEEEecCCCCC-CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC---CCchhHHHH
Q 040187 66 TRDLWFRLYSPTNTTA-TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR---CPSQYEDGI 141 (299)
Q Consensus 66 ~~~i~~~i~~P~~~~~-~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~---~~~~~~D~~ 141 (299)
..-..+.-|.|...+. ...|-||++-- ..|. ..-..+++++.+. + |+.|+.+|+.-....+ ..-.++|..
T Consensus 83 ~~~~~L~~y~~~~~~~~~~~~pvLiV~P---l~g~-~~~L~RS~V~~Ll-~-g~dVYl~DW~~p~~vp~~~~~f~ldDYi 156 (406)
T TIGR01849 83 KPFCRLIHFKRQGFRAELPGPAVLIVAP---MSGH-YATLLRSTVEALL-P-DHDVYITDWVNARMVPLSAGKFDLEDYI 156 (406)
T ss_pred CCCeEEEEECCCCcccccCCCcEEEEcC---CchH-HHHHHHHHHHHHh-C-CCcEEEEeCCCCCCCchhcCCCCHHHHH
Confidence 4455666676764321 12244555544 1111 1111356777776 6 9999999998654322 223456655
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCC
Q 040187 142 DALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEE 209 (299)
Q Consensus 142 ~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 209 (299)
+.+.-..+.. .++ +.++|.|+||.+++.++....+++ .+.+++.++++.+.+|...
T Consensus 157 ~~l~~~i~~~----------G~~-v~l~GvCqgG~~~laa~Al~a~~~-~p~~~~sltlm~~PID~~~ 212 (406)
T TIGR01849 157 DYLIEFIRFL----------GPD-IHVIAVCQPAVPVLAAVALMAENE-PPAQPRSMTLMGGPIDARA 212 (406)
T ss_pred HHHHHHHHHh----------CCC-CcEEEEchhhHHHHHHHHHHHhcC-CCCCcceEEEEecCccCCC
Confidence 4333333322 234 999999999999887776654432 2346999999988887654
No 150
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.73 E-value=0.00097 Score=54.02 Aligned_cols=124 Identities=15% Similarity=0.106 Sum_probs=73.0
Q ss_pred EEEEEcCCCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCC----CC----C
Q 040187 59 FDVSVDATRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRR----SP----E 130 (299)
Q Consensus 59 ~~~~~~~~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~----~~----~ 130 (299)
+-+.++++..|.+.--.|++....+.++|+...|-| ..-+.+..++.+++ .+||.|+.+|--. +. +
T Consensus 5 hvi~~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~-----rrmdh~agLA~YL~-~NGFhViRyDsl~HvGlSsG~I~e 78 (294)
T PF02273_consen 5 HVIRLEDGRQIRVWETRPKNNEPKRNNTILIAPGFA-----RRMDHFAGLAEYLS-ANGFHVIRYDSLNHVGLSSGDINE 78 (294)
T ss_dssp EEEEETTTEEEEEEEE---TTS---S-EEEEE-TT------GGGGGGHHHHHHHH-TTT--EEEE---B-----------
T ss_pred ceeEcCCCCEEEEeccCCCCCCcccCCeEEEecchh-----HHHHHHHHHHHHHh-hCCeEEEeccccccccCCCCChhh
Confidence 445666666677766678876556679999999943 22334778888887 8999999998542 11 1
Q ss_pred CCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCC
Q 040187 131 HRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGG 207 (299)
Q Consensus 131 ~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 207 (299)
.+.....+|...+++|+.+.+ ..+++++-.|.-|-+|+.++.+ ..+..+|..-++++.
T Consensus 79 ftms~g~~sL~~V~dwl~~~g-----------~~~~GLIAaSLSaRIAy~Va~~--------i~lsfLitaVGVVnl 136 (294)
T PF02273_consen 79 FTMSIGKASLLTVIDWLATRG-----------IRRIGLIAASLSARIAYEVAAD--------INLSFLITAVGVVNL 136 (294)
T ss_dssp --HHHHHHHHHHHHHHHHHTT--------------EEEEEETTHHHHHHHHTTT--------S--SEEEEES--S-H
T ss_pred cchHHhHHHHHHHHHHHHhcC-----------CCcchhhhhhhhHHHHHHHhhc--------cCcceEEEEeeeeeH
Confidence 222345688999999999655 5779999999999999999864 246677766676653
No 151
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.68 E-value=0.00059 Score=55.67 Aligned_cols=92 Identities=23% Similarity=0.217 Sum_probs=60.8
Q ss_pred EEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCC--CchhHHHHHHHHHHHhhcCCCCCCCCCCCC
Q 040187 86 VIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRC--PSQYEDGIDALKFIDSSFIDIQNFPACADI 163 (299)
Q Consensus 86 ~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~--~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~ 163 (299)
.||.|-||.|+ |..-.-.|+.++..|+ +.||+|++.-|...=.|.. ....+....+++.+.+... .....
T Consensus 18 gvihFiGGaf~-ga~P~itYr~lLe~La-~~Gy~ViAtPy~~tfDH~~~A~~~~~~f~~~~~~L~~~~~------~~~~~ 89 (250)
T PF07082_consen 18 GVIHFIGGAFV-GAAPQITYRYLLERLA-DRGYAVIATPYVVTFDHQAIAREVWERFERCLRALQKRGG------LDPAY 89 (250)
T ss_pred EEEEEcCccee-ccCcHHHHHHHHHHHH-hCCcEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHHHhcC------CCccc
Confidence 78999999987 5555667899999999 6799999999975422211 0112333334444544331 11112
Q ss_pred CcEEEEecChhHHHHHHHHHHh
Q 040187 164 KQCFLAGDSAGGNLAHNVAVLA 185 (299)
Q Consensus 164 ~~i~l~G~S~GG~lA~~~a~~~ 185 (299)
-.++=+|||+|+-+-+.+....
T Consensus 90 lP~~~vGHSlGcklhlLi~s~~ 111 (250)
T PF07082_consen 90 LPVYGVGHSLGCKLHLLIGSLF 111 (250)
T ss_pred CCeeeeecccchHHHHHHhhhc
Confidence 3578899999999988887653
No 152
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.67 E-value=0.00048 Score=62.47 Aligned_cols=125 Identities=17% Similarity=0.166 Sum_probs=75.7
Q ss_pred CEEEEEEecCCCCCCCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC-C-------------
Q 040187 68 DLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR-C------------- 133 (299)
Q Consensus 68 ~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~-~------------- 133 (299)
+-.-|.|.-...-.+..|++||+=|-|-.... .....+...+|.+.|..++.+++|..+++. +
T Consensus 13 tf~qRY~~n~~~~~~~gpifl~~ggE~~~~~~---~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~ 89 (434)
T PF05577_consen 13 TFSQRYWVNDQYYKPGGPIFLYIGGEGPIEPF---WINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTS 89 (434)
T ss_dssp EEEEEEEEE-TT--TTSEEEEEE--SS-HHHH---HHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SH
T ss_pred eEEEEEEEEhhhcCCCCCEEEEECCCCccchh---hhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCH
Confidence 33444444443322347888888553322110 112346788999999999999999765432 2
Q ss_pred CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCC
Q 040187 134 PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 134 ~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~ 208 (299)
.+++.|+...++++..... ..+..+++++|.|.||.||+++-.+ .|..+.|.++=|+.+...
T Consensus 90 ~QALaD~a~F~~~~~~~~~-------~~~~~pwI~~GgSY~G~Laaw~r~k------yP~~~~ga~ASSapv~a~ 151 (434)
T PF05577_consen 90 EQALADLAYFIRYVKKKYN-------TAPNSPWIVFGGSYGGALAAWFRLK------YPHLFDGAWASSAPVQAK 151 (434)
T ss_dssp HHHHHHHHHHHHHHHHHTT-------TGCC--EEEEEETHHHHHHHHHHHH-------TTT-SEEEEET--CCHC
T ss_pred HHHHHHHHHHHHHHHHhhc-------CCCCCCEEEECCcchhHHHHHHHhh------CCCeeEEEEeccceeeee
Confidence 2567899999999885431 1245689999999999999999998 566788888877766543
No 153
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.67 E-value=0.00012 Score=59.43 Aligned_cols=82 Identities=15% Similarity=0.131 Sum_probs=46.8
Q ss_pred EEEEcCCccccccCCCchhHHHHHHHHhhCCcE---EEeecCCCCCCCCCCch-------hHHHHHHHHHHHhhcCCCCC
Q 040187 87 IVYFHGGGFAILAANSKVYDDACRRLAVEVPAV---VISVNYRRSPEHRCPSQ-------YEDGIDALKFIDSSFIDIQN 156 (299)
Q Consensus 87 vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~---v~~~dyr~~~~~~~~~~-------~~D~~~a~~~l~~~~~~~~~ 156 (299)
||++||-+ ++ ....+..+...|. +.||. +++++|-.......... ..++.+.++-+++..
T Consensus 4 VVlVHG~~---~~-~~~~w~~~~~~l~-~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~T----- 73 (219)
T PF01674_consen 4 VVLVHGTG---GN-AYSNWSTLAPYLK-AAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYT----- 73 (219)
T ss_dssp EEEE--TT---TT-TCGGCCHHHHHHH-HTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHH-----
T ss_pred EEEECCCC---cc-hhhCHHHHHHHHH-HcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhh-----
Confidence 67799944 21 2233567778886 78999 79999975443221111 124555555555543
Q ss_pred CCCCCCCCcEEEEecChhHHHHHHHHHH
Q 040187 157 FPACADIKQCFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 157 ~~~~~d~~~i~l~G~S~GG~lA~~~a~~ 184 (299)
.. +|=|+|||+||.+|..+..-
T Consensus 74 -----Ga-kVDIVgHS~G~~iaR~yi~~ 95 (219)
T PF01674_consen 74 -----GA-KVDIVGHSMGGTIARYYIKG 95 (219)
T ss_dssp -----T---EEEEEETCHHHHHHHHHHH
T ss_pred -----CC-EEEEEEcCCcCHHHHHHHHH
Confidence 35 89999999999999988764
No 154
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.66 E-value=4.3e-05 Score=62.16 Aligned_cols=118 Identities=14% Similarity=0.047 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCC--CCCCccceEEEecccCCCCCCChHH
Q 040187 137 YEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCN--FSRLRLNGLIAIQPFFGGEERTESE 214 (299)
Q Consensus 137 ~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~--~~~~~~~~~i~~~p~~~~~~~~~~~ 214 (299)
..+..+++++|.+... + +.--.+|+|+|.||.+|+.++....... .....++.+|+++++.........
T Consensus 83 ~~~~~~sl~~l~~~i~-----~---~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~~~~- 153 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIE-----E---NGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPDYQE- 153 (212)
T ss_dssp G---HHHHHHHHHHHH-----H---H---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-GTT-
T ss_pred ccCHHHHHHHHHHHHH-----h---cCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchhhhh-
Confidence 4566777777766543 1 1124789999999999999987643211 123578999999987643211000
Q ss_pred HhhcCCCCcchhhHHHHHHHcCCCCCCCCcH--HHHHHHHHHHHCCCcEEEEEeCCCceEEEe
Q 040187 215 MRFQRDPLVGLKLTDWMWKAFLPEGSNRDHP--AANRYYEGLKKCGKDAYLIEYPNAVHCFYL 275 (299)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~ 275 (299)
.+....+ ......+.+..|...+ ....+++..... .+++..+| +|.+..
T Consensus 154 -~~~~~~i-------~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~---~~v~~h~g-GH~vP~ 204 (212)
T PF03959_consen 154 -LYDEPKI-------SIPTLHVIGENDPVVPPERSEALAEMFDPD---ARVIEHDG-GHHVPR 204 (212)
T ss_dssp -TT--TT----------EEEEEEETT-SSS-HHHHHHHHHHHHHH---EEEEEESS-SSS---
T ss_pred -hhccccC-------CCCeEEEEeCCCCCcchHHHHHHHHhccCC---cEEEEECC-CCcCcC
Confidence 0000000 1111223344555555 333566666543 67777776 675443
No 155
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=97.66 E-value=0.0021 Score=53.54 Aligned_cols=141 Identities=20% Similarity=0.133 Sum_probs=76.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCChHH---
Q 040187 138 EDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTESE--- 214 (299)
Q Consensus 138 ~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~--- 214 (299)
.=+..++.+|.++. ..+++-++||||||..++.++....... .-+.+.-+|.+++.+++.......
T Consensus 87 ~wl~~vl~~L~~~Y----------~~~~~N~VGHSmGg~~~~~yl~~~~~~~-~~P~l~K~V~Ia~pfng~~~~~~~~~~ 155 (255)
T PF06028_consen 87 KWLKKVLKYLKKKY----------HFKKFNLVGHSMGGLSWTYYLENYGNDK-NLPKLNKLVTIAGPFNGILGMNDDQNQ 155 (255)
T ss_dssp HHHHHHHHHHHHCC------------SEEEEEEETHHHHHHHHHHHHCTTGT-TS-EEEEEEEES--TTTTTCCSC-TTT
T ss_pred HHHHHHHHHHHHhc----------CCCEEeEEEECccHHHHHHHHHHhccCC-CCcccceEEEeccccCccccccccchh
Confidence 34455666666654 4679999999999999998887754321 234788888888777655322111
Q ss_pred Hh-hcCCCCcchhhHHHHHHH---cCCC---------------CCCCCcHHHH--HHHHHHHHCCCcEEEEEeCC--Cce
Q 040187 215 MR-FQRDPLVGLKLTDWMWKA---FLPE---------------GSNRDHPAAN--RYYEGLKKCGKDAYLIEYPN--AVH 271 (299)
Q Consensus 215 ~~-~~~~~~~~~~~~~~~~~~---~~~~---------------~~~~~~~~~~--~~~~~l~~~g~~~~~~~~~g--~~H 271 (299)
.. ....|-........+... .++. ..|-.+|..+ .+.--++.....++..++.| +.|
T Consensus 156 ~~~~~~gp~~~~~~y~~l~~~~~~~~p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~H 235 (255)
T PF06028_consen 156 NDLNKNGPKSMTPMYQDLLKNRRKNFPKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQH 235 (255)
T ss_dssp T-CSTT-BSS--HHHHHHHHTHGGGSTTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSC
T ss_pred hhhcccCCcccCHHHHHHHHHHHhhCCCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCcc
Confidence 00 111122222233333222 1111 1233455544 33334455556777777876 578
Q ss_pred EEEecCCchHHHHHHHHHHHHHH
Q 040187 272 CFYLFPEVLECSLFLKEVKDFIC 294 (299)
Q Consensus 272 ~f~~~~~~~~~~~~~~~i~~fl~ 294 (299)
.-. .+..++.+.|.+||=
T Consensus 236 S~L-----heN~~V~~~I~~FLw 253 (255)
T PF06028_consen 236 SQL-----HENPQVDKLIIQFLW 253 (255)
T ss_dssp CGG-----GCCHHHHHHHHHHHC
T ss_pred ccC-----CCCHHHHHHHHHHhc
Confidence 432 346788888888873
No 156
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.63 E-value=0.00021 Score=57.27 Aligned_cols=70 Identities=19% Similarity=0.169 Sum_probs=53.0
Q ss_pred hhHHHHHHHHhhCCcEEEeecCCCCCCCCCC-----------chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecC
Q 040187 104 VYDDACRRLAVEVPAVVISVNYRRSPEHRCP-----------SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDS 172 (299)
Q Consensus 104 ~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~-----------~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S 172 (299)
.|+.++...+ +.||.|+..|||+.+++.-. -...|.-++++++.+.. .....+.+|||
T Consensus 45 fYRrfA~~a~-~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~----------~~~P~y~vgHS 113 (281)
T COG4757 45 FYRRFAAAAA-KAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKAL----------PGHPLYFVGHS 113 (281)
T ss_pred HhHHHHHHhh-ccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhC----------CCCceEEeecc
Confidence 3666666655 88999999999987655322 23478999999998865 24568999999
Q ss_pred hhHHHHHHHHHH
Q 040187 173 AGGNLAHNVAVL 184 (299)
Q Consensus 173 ~GG~lA~~~a~~ 184 (299)
+||++.-.+..+
T Consensus 114 ~GGqa~gL~~~~ 125 (281)
T COG4757 114 FGGQALGLLGQH 125 (281)
T ss_pred ccceeecccccC
Confidence 999977766654
No 157
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=97.62 E-value=0.00034 Score=61.83 Aligned_cols=133 Identities=16% Similarity=0.157 Sum_probs=86.0
Q ss_pred CCceEEEEEEcCCCCEEEEEE-ecCCCCCCCccEEEEEcC-----CccccccCCCchhHHHHHHHHhhCCcEEEeecCCC
Q 040187 54 NGVTSFDVSVDATRDLWFRLY-SPTNTTATNLPVIVYFHG-----GGFAILAANSKVYDDACRRLAVEVPAVVISVNYRR 127 (299)
Q Consensus 54 ~~~~~~~~~~~~~~~i~~~i~-~P~~~~~~~~p~vv~~HG-----Gg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~ 127 (299)
.+...++..+...++.-+.+- .|... +++|+|++.|| ..|+.-... ..++--| .++||.|..-+-|+
T Consensus 44 ~gy~~E~h~V~T~DgYiL~lhRIp~~~--~~rp~Vll~HGLl~sS~~Wv~n~p~----~sLaf~L-adaGYDVWLgN~RG 116 (403)
T KOG2624|consen 44 YGYPVEEHEVTTEDGYILTLHRIPRGK--KKRPVVLLQHGLLASSSSWVLNGPE----QSLAFLL-ADAGYDVWLGNNRG 116 (403)
T ss_pred cCCceEEEEEEccCCeEEEEeeecCCC--CCCCcEEEeeccccccccceecCcc----ccHHHHH-HHcCCceeeecCcC
Confidence 344455554443333333332 35554 68999999999 234322111 2333344 48899999999996
Q ss_pred C----------CC-CC-C------CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCC
Q 040187 128 S----------PE-HR-C------PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCN 189 (299)
Q Consensus 128 ~----------~~-~~-~------~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~ 189 (299)
. +. .. | .-...|+-+.++++.+.. ..+++..+|||.|+......+....+
T Consensus 117 n~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T----------~~~kl~yvGHSQGtt~~fv~lS~~p~-- 184 (403)
T KOG2624|consen 117 NTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKT----------GQEKLHYVGHSQGTTTFFVMLSERPE-- 184 (403)
T ss_pred cccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhc----------cccceEEEEEEccchhheehhcccch--
Confidence 3 21 11 1 124579999999998865 47899999999999887777655322
Q ss_pred CCCCccceEEEecccCC
Q 040187 190 FSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 190 ~~~~~~~~~i~~~p~~~ 206 (299)
...+++..++++|...
T Consensus 185 -~~~kI~~~~aLAP~~~ 200 (403)
T KOG2624|consen 185 -YNKKIKSFIALAPAAF 200 (403)
T ss_pred -hhhhhheeeeecchhh
Confidence 1247899999999763
No 158
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.62 E-value=0.0018 Score=59.04 Aligned_cols=67 Identities=22% Similarity=0.138 Sum_probs=46.3
Q ss_pred hhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCC----CCCCccceEEEecccCCCCC
Q 040187 136 QYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCN----FSRLRLNGLIAIQPFFGGEE 209 (299)
Q Consensus 136 ~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~~~ 209 (299)
..+|...+++.+.+... . ....+++|+|+|+||+.+..+|.+..+.. .....++|+++..|+++...
T Consensus 150 ~a~d~~~~l~~f~~~~p-----~--~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp~~ 220 (462)
T PTZ00472 150 VSEDMYNFLQAFFGSHE-----D--LRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDPYT 220 (462)
T ss_pred HHHHHHHHHHHHHHhCc-----c--ccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccChhh
Confidence 44666666665444331 1 24578999999999999999998764211 12357899999999987543
No 159
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=97.58 E-value=0.00028 Score=63.44 Aligned_cols=92 Identities=17% Similarity=0.102 Sum_probs=60.2
Q ss_pred hhHHHHHHHHhhCCcEEEeecCCCCCCCC-----CCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHH
Q 040187 104 VYDDACRRLAVEVPAVVISVNYRRSPEHR-----CPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLA 178 (299)
Q Consensus 104 ~~~~~~~~la~~~g~~v~~~dyr~~~~~~-----~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA 178 (299)
.+..++..|. +.||.+ ..|.+++|... ....+++..+.++.+.+.. ..+++.++||||||.++
T Consensus 109 ~~~~li~~L~-~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~----------g~~kV~LVGHSMGGlva 176 (440)
T PLN02733 109 YFHDMIEQLI-KWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKAS----------GGKKVNIISHSMGGLLV 176 (440)
T ss_pred HHHHHHHHHH-HcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHc----------CCCCEEEEEECHhHHHH
Confidence 3567788887 789875 66766665321 1123445555555554432 34789999999999999
Q ss_pred HHHHHHhccCCCCCCccceEEEecccCCCCC
Q 040187 179 HNVAVLADGCNFSRLRLNGLIAIQPFFGGEE 209 (299)
Q Consensus 179 ~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 209 (299)
..++....+. -...++.+|++++.+++..
T Consensus 177 ~~fl~~~p~~--~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 177 KCFMSLHSDV--FEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred HHHHHHCCHh--HHhHhccEEEECCCCCCCc
Confidence 9988764332 1235788898888766553
No 160
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=97.57 E-value=0.00029 Score=56.23 Aligned_cols=81 Identities=16% Similarity=0.139 Sum_probs=55.3
Q ss_pred CCcEEEeecCCCCCCC------------CCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHH
Q 040187 116 VPAVVISVNYRRSPEH------------RCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAV 183 (299)
Q Consensus 116 ~g~~v~~~dyr~~~~~------------~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~ 183 (299)
.-+.|++|-||...-. .+...+.|+.+|+++-.++.. +...++|+|||.|+.+...+..
T Consensus 44 ~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n---------~GRPfILaGHSQGs~~l~~LL~ 114 (207)
T PF11288_consen 44 GVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYN---------NGRPFILAGHSQGSMHLLRLLK 114 (207)
T ss_pred cCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcC---------CCCCEEEEEeChHHHHHHHHHH
Confidence 3578999999954211 122457899999999988763 4467999999999999999877
Q ss_pred Hhc-cCCCCCCccceEEEecccC
Q 040187 184 LAD-GCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 184 ~~~-~~~~~~~~~~~~i~~~p~~ 205 (299)
..- ...+....|++.++-+++.
T Consensus 115 e~~~~~pl~~rLVAAYliG~~v~ 137 (207)
T PF11288_consen 115 EEIAGDPLRKRLVAAYLIGYPVT 137 (207)
T ss_pred HHhcCchHHhhhheeeecCcccc
Confidence 632 2223333555555555543
No 161
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=97.57 E-value=0.0013 Score=55.75 Aligned_cols=98 Identities=17% Similarity=0.164 Sum_probs=67.2
Q ss_pred CCccEEEEEcCC-ccc-cccCCCchhHHHHHHHHhhCCcEEEeecCCCCC---CCCCCchh-HHHHHHHHHHHhhcCCCC
Q 040187 82 TNLPVIVYFHGG-GFA-ILAANSKVYDDACRRLAVEVPAVVISVNYRRSP---EHRCPSQY-EDGIDALKFIDSSFIDIQ 155 (299)
Q Consensus 82 ~~~p~vv~~HGG-g~~-~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~---~~~~~~~~-~D~~~a~~~l~~~~~~~~ 155 (299)
+..-.||++-|. ||. .|..+ .-+ +.||.|+..++.+.. +.++|..- +.+.+.+++.+.+.
T Consensus 241 ngq~LvIC~EGNAGFYEvG~m~---------tP~-~lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~L---- 306 (517)
T KOG1553|consen 241 NGQDLVICFEGNAGFYEVGVMN---------TPA-QLGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVL---- 306 (517)
T ss_pred CCceEEEEecCCccceEeeeec---------ChH-HhCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHc----
Confidence 345678888883 322 23322 222 779999999988654 34555433 33444567777655
Q ss_pred CCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 156 NFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 156 ~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
+..+++|+++|+|-||+-++++|..++ .++++|+-+.+
T Consensus 307 ----gf~~edIilygWSIGGF~~~waAs~YP-------dVkavvLDAtF 344 (517)
T KOG1553|consen 307 ----GFRQEDIILYGWSIGGFPVAWAASNYP-------DVKAVVLDATF 344 (517)
T ss_pred ----CCCccceEEEEeecCCchHHHHhhcCC-------CceEEEeecch
Confidence 478899999999999999999998643 58899986654
No 162
>COG3150 Predicted esterase [General function prediction only]
Probab=97.53 E-value=0.0047 Score=47.10 Aligned_cols=21 Identities=29% Similarity=0.434 Sum_probs=19.1
Q ss_pred cEEEEecChhHHHHHHHHHHh
Q 040187 165 QCFLAGDSAGGNLAHNVAVLA 185 (299)
Q Consensus 165 ~i~l~G~S~GG~lA~~~a~~~ 185 (299)
...++|.|.||+.|.+++.+.
T Consensus 60 ~p~ivGssLGGY~At~l~~~~ 80 (191)
T COG3150 60 SPLIVGSSLGGYYATWLGFLC 80 (191)
T ss_pred CceEEeecchHHHHHHHHHHh
Confidence 389999999999999999874
No 163
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.43 E-value=0.0011 Score=56.94 Aligned_cols=112 Identities=11% Similarity=0.076 Sum_probs=67.8
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEE--eecCCCCC---CCCC-----CchhHHHHHHHHHHHhhc
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVI--SVNYRRSP---EHRC-----PSQYEDGIDALKFIDSSF 151 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~--~~dyr~~~---~~~~-----~~~~~D~~~a~~~l~~~~ 151 (299)
..+-+++|+||-.+.+ ... -.. ...++...|+..+ .+.+.-.+ .+.+ .....+....+++|.+..
T Consensus 114 ~~k~vlvFvHGfNntf---~da-v~R-~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~ 188 (377)
T COG4782 114 SAKTVLVFVHGFNNTF---EDA-VYR-TAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDK 188 (377)
T ss_pred CCCeEEEEEcccCCch---hHH-HHH-HHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCC
Confidence 3568999999933211 110 111 2334445554433 33333211 1111 133467777888887765
Q ss_pred CCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCC--CCCccceEEEecccCCCC
Q 040187 152 IDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNF--SRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 152 ~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~--~~~~~~~~i~~~p~~~~~ 208 (299)
...+|.|++||||..+++....++..++. -+.+++-+|+.+|=.|..
T Consensus 189 ----------~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~D 237 (377)
T COG4782 189 ----------PVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVD 237 (377)
T ss_pred ----------CCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChh
Confidence 36889999999999999999877653322 245889999999866543
No 164
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=97.41 E-value=0.012 Score=47.99 Aligned_cols=106 Identities=19% Similarity=0.281 Sum_probs=63.3
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhC----CcEEEeecCCCC--------CCCC--------------CCch
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEV----PAVVISVNYRRS--------PEHR--------------CPSQ 136 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~----g~~v~~~dyr~~--------~~~~--------------~~~~ 136 (299)
..| .||+||.| |+.++ ...+++++..+. -..++.+|--++ -... ....
T Consensus 45 ~iP-TIfIhGsg---G~asS--~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~ 118 (288)
T COG4814 45 AIP-TIFIHGSG---GTASS--LNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQ 118 (288)
T ss_pred ccc-eEEEecCC---CChhH--HHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhH
Confidence 345 46799955 55554 677888887442 122333332211 1111 1122
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhc-cCCCCCCccceEEEecccCC
Q 040187 137 YEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLAD-GCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 137 ~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~-~~~~~~~~~~~~i~~~p~~~ 206 (299)
-.=...++.+|.++. +...+-++||||||.-......... ++. -+.+.-.|.+.+.+.
T Consensus 119 s~wlk~~msyL~~~Y----------~i~k~n~VGhSmGg~~~~~Y~~~yg~dks--~P~lnK~V~l~gpfN 177 (288)
T COG4814 119 SKWLKKAMSYLQKHY----------NIPKFNAVGHSMGGLGLTYYMIDYGDDKS--LPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHHHHHHHHHHhc----------CCceeeeeeeccccHHHHHHHHHhcCCCC--CcchhheEEeccccc
Confidence 234456778887775 5678999999999987777776654 442 246777777776655
No 165
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.37 E-value=0.037 Score=48.53 Aligned_cols=121 Identities=15% Similarity=0.246 Sum_probs=74.0
Q ss_pred CEEEEEEecCCCCCCCccEEEEEcCCcccc-ccCCCchhHHHHHHHHhhCCcEEEeecC--------CCCCC--------
Q 040187 68 DLWFRLYSPTNTTATNLPVIVYFHGGGFAI-LAANSKVYDDACRRLAVEVPAVVISVNY--------RRSPE-------- 130 (299)
Q Consensus 68 ~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~-g~~~~~~~~~~~~~la~~~g~~v~~~dy--------r~~~~-------- 130 (299)
...+.|+.|++. .....+++++.||+-.. ...........+..+|...|.+|+.+.- ...+.
T Consensus 49 ~H~l~I~vP~~~-~~~~~all~i~gG~~~~~~~~~~~~~~~~~~~~A~~t~siv~~l~qvPNQpl~f~~d~~~r~ED~iI 127 (367)
T PF10142_consen 49 WHWLTIYVPKND-KNPDTALLFITGGSNRNWPGPPPDFDDELLQMIARATGSIVAILYQVPNQPLTFDNDPKPRTEDAII 127 (367)
T ss_pred EEEEEEEECCCC-CCCceEEEEEECCcccCCCCCCCcchHHHHHHHHHhcCCEEEEeCcCCCCCeEeCCCCccccHHHHH
Confidence 356789999982 25678999999987111 1122223467789999999998887652 11111
Q ss_pred ------------CCCCc---hhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCcc
Q 040187 131 ------------HRCPS---QYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRL 195 (299)
Q Consensus 131 ------------~~~~~---~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~ 195 (299)
..++. +..-+..|++-+.+... ...+++.++.+|.|.|==|..+..+|. ...+|
T Consensus 128 AytW~~fl~~~d~~w~l~~PMtka~vrAMD~vq~~~~----~~~~~~i~~FvV~GaSKRGWTtWltaa-------~D~RV 196 (367)
T PF10142_consen 128 AYTWRKFLETGDPEWPLHLPMTKAAVRAMDAVQEFLK----KKFGVNIEKFVVTGASKRGWTTWLTAA-------VDPRV 196 (367)
T ss_pred HHHHHHHhccCCccchhhhhHHHHHHHHHHHHHHHHH----hhcCCCccEEEEeCCchHhHHHHHhhc-------cCcce
Confidence 11111 11222333333333321 124678899999999999999998887 23467
Q ss_pred ceEEE
Q 040187 196 NGLIA 200 (299)
Q Consensus 196 ~~~i~ 200 (299)
+|++-
T Consensus 197 ~aivP 201 (367)
T PF10142_consen 197 KAIVP 201 (367)
T ss_pred eEEee
Confidence 77763
No 166
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.28 E-value=0.0027 Score=51.79 Aligned_cols=42 Identities=19% Similarity=0.109 Sum_probs=27.4
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhcc
Q 040187 141 IDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADG 187 (299)
Q Consensus 141 ~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~ 187 (299)
....+++.+... .......+|.++|||+||-++-.+.....+
T Consensus 60 ~rL~~eI~~~~~-----~~~~~~~~IsfIgHSLGGli~r~al~~~~~ 101 (217)
T PF05057_consen 60 ERLAEEILEHIK-----DYESKIRKISFIGHSLGGLIARYALGLLHD 101 (217)
T ss_pred HHHHHHHHHhcc-----ccccccccceEEEecccHHHHHHHHHHhhh
Confidence 344555555542 111224689999999999999877765543
No 167
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.28 E-value=0.005 Score=56.10 Aligned_cols=168 Identities=12% Similarity=0.052 Sum_probs=83.8
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCC--cEEEeecCCCC-CCCCCCchhHHHHHHHHHHHhhcCCCCCCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVP--AVVISVNYRRS-PEHRCPSQYEDGIDALKFIDSSFIDIQNFPA 159 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g--~~v~~~dyr~~-~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~ 159 (299)
..|++++.||++- .+..++ ++..+-..+. -.| ..|..+||+.. ++.......+-...+.++..... ..
T Consensus 175 ~spl~i~aps~p~-ap~tSd-~~~~wqs~ls-l~gevvev~tfdl~n~igG~nI~h~ae~~vSf~r~kvlei------~g 245 (784)
T KOG3253|consen 175 ASPLAIKAPSTPL-APKTSD-RMWSWQSRLS-LKGEVVEVPTFDLNNPIGGANIKHAAEYSVSFDRYKVLEI------TG 245 (784)
T ss_pred CCceEEeccCCCC-CCccch-HHHhHHHHHh-hhceeeeeccccccCCCCCcchHHHHHHHHHHhhhhhhhh------hc
Confidence 4589999999872 222222 2333333333 223 33555666632 22222222333333333322221 11
Q ss_pred CCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCCh----HHHhhcCCCCcchhhHHHHHHHc
Q 040187 160 CADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTE----SEMRFQRDPLVGLKLTDWMWKAF 235 (299)
Q Consensus 160 ~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 235 (299)
......|+|+|+|||+-++..++... ....+.++|++.=.++..+... .....-+.|+ .|
T Consensus 246 efpha~IiLvGrsmGAlVachVSpsn-----sdv~V~~vVCigypl~~vdgprgirDE~Lldmk~PV-----------LF 309 (784)
T KOG3253|consen 246 EFPHAPIILVGRSMGALVACHVSPSN-----SDVEVDAVVCIGYPLDTVDGPRGIRDEALLDMKQPV-----------LF 309 (784)
T ss_pred cCCCCceEEEecccCceeeEEecccc-----CCceEEEEEEecccccCCCcccCCcchhhHhcCCce-----------EE
Confidence 24567899999999976666665432 2235899998864443322110 0011111222 34
Q ss_pred CCCCCCCCcHHHHHHHHHHHHCCCcEEEEEeCCCceEEEec
Q 040187 236 LPEGSNRDHPAANRYYEGLKKCGKDAYLIEYPNAVHCFYLF 276 (299)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~ 276 (299)
+.+..+..-+.- .+.+..++.-.+++++++.+++|.+-.-
T Consensus 310 V~Gsnd~mcspn-~ME~vreKMqA~~elhVI~~adhsmaip 349 (784)
T KOG3253|consen 310 VIGSNDHMCSPN-SMEEVREKMQAEVELHVIGGADHSMAIP 349 (784)
T ss_pred EecCCcccCCHH-HHHHHHHHhhccceEEEecCCCccccCC
Confidence 444433322211 2223333334578899999999988664
No 168
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.25 E-value=0.00055 Score=52.19 Aligned_cols=121 Identities=13% Similarity=0.087 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCCCCCCh-----
Q 040187 138 EDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGGEERTE----- 212 (299)
Q Consensus 138 ~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~----- 212 (299)
+--.+-.+|+++... +.+..+.|-||||..|+.+..+ .|..+..+|.++++++..+...
T Consensus 85 ~rH~AyerYv~eEal----------pgs~~~sgcsmGayhA~nfvfr------hP~lftkvialSGvYdardffg~yydd 148 (227)
T COG4947 85 ERHRAYERYVIEEAL----------PGSTIVSGCSMGAYHAANFVFR------HPHLFTKVIALSGVYDARDFFGGYYDD 148 (227)
T ss_pred HHHHHHHHHHHHhhc----------CCCccccccchhhhhhhhhhee------ChhHhhhheeecceeeHHHhccccccC
Confidence 334445577877762 4568899999999999999988 6778899999999876542111
Q ss_pred -------HH-HhhcCCCCcchhhHHHHHHHcCCCCCCCCcHHHHHHHHHHHHCCCcEEEEEeCCCceEEEe
Q 040187 213 -------SE-MRFQRDPLVGLKLTDWMWKAFLPEGSNRDHPAANRYYEGLKKCGKDAYLIEYPNAVHCFYL 275 (299)
Q Consensus 213 -------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~ 275 (299)
.. .+....|+ ..+..+..-..+..+..+...+....+.+.|.+..++..++++.|..|.+..
T Consensus 149 Dv~ynsP~dylpg~~dp~-~l~rlr~~~~vfc~G~e~~~L~~~~~L~~~l~dKqipaw~~~WggvaHdw~w 218 (227)
T COG4947 149 DVYYNSPSDYLPGLADPF-RLERLRRIDMVFCIGDEDPFLDNNQHLSRLLSDKQIPAWMHVWGGVAHDWGW 218 (227)
T ss_pred ceeecChhhhccCCcChH-HHHHHhhccEEEEecCccccccchHHHHHHhccccccHHHHHhcccccccHH
Confidence 10 00000111 0111111111122233333334444778888888888889999998886543
No 169
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.21 E-value=0.0067 Score=48.12 Aligned_cols=108 Identities=18% Similarity=0.125 Sum_probs=66.6
Q ss_pred CCccEEEEEcCCcccccc-----------CCCchhHHHHHHHHhhCCcEEEeecCC----CC-----CCCCCCchhHHHH
Q 040187 82 TNLPVIVYFHGGGFAILA-----------ANSKVYDDACRRLAVEVPAVVISVNYR----RS-----PEHRCPSQYEDGI 141 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~-----------~~~~~~~~~~~~la~~~g~~v~~~dyr----~~-----~~~~~~~~~~D~~ 141 (299)
++..++|+|||.|.+... .+....-+++++- .+.||.|+..+-. +. |.......++-+.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rA-v~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~ 177 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRA-VAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAK 177 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHH-HHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHH
Confidence 455689999998876321 1111223444443 3668877776632 11 2222234555555
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 142 DALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 142 ~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
-.+..+..-. .++.|+++.||.||.+.+.+..+..+. .++.++.+....
T Consensus 178 yvw~~~v~pa----------~~~sv~vvahsyGG~~t~~l~~~f~~d----~~v~aialTDs~ 226 (297)
T KOG3967|consen 178 YVWKNIVLPA----------KAESVFVVAHSYGGSLTLDLVERFPDD----ESVFAIALTDSA 226 (297)
T ss_pred HHHHHHhccc----------CcceEEEEEeccCChhHHHHHHhcCCc----cceEEEEeeccc
Confidence 5555555443 578899999999999999999886543 356666665444
No 170
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.11 E-value=0.11 Score=42.45 Aligned_cols=91 Identities=18% Similarity=0.253 Sum_probs=56.7
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCC--cEEE---eecCCCCC-------CCCCC--chh-HHHHHHHHH
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVP--AVVI---SVNYRRSP-------EHRCP--SQY-EDGIDALKF 146 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g--~~v~---~~dyr~~~-------~~~~~--~~~-~D~~~a~~~ 146 (299)
.+.+.++++-|.. .....|..+++.+-...+ ..|. ...+-+.| ++... -.+ +.+..-+++
T Consensus 27 ~~~~li~~IpGNP-----G~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaF 101 (301)
T KOG3975|consen 27 EDKPLIVWIPGNP-----GLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAF 101 (301)
T ss_pred CCceEEEEecCCC-----CchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHH
Confidence 5789999999943 223347788888876655 2222 22232333 11100 012 334556777
Q ss_pred HHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhc
Q 040187 147 IDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLAD 186 (299)
Q Consensus 147 l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~ 186 (299)
+.+... ...+|+++|||-|+++.+.+....+
T Consensus 102 ik~~~P---------k~~ki~iiGHSiGaYm~Lqil~~~k 132 (301)
T KOG3975|consen 102 IKEYVP---------KDRKIYIIGHSIGAYMVLQILPSIK 132 (301)
T ss_pred HHHhCC---------CCCEEEEEecchhHHHHHHHhhhcc
Confidence 777663 4578999999999999999987533
No 171
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=97.07 E-value=0.0059 Score=52.70 Aligned_cols=102 Identities=19% Similarity=0.132 Sum_probs=62.9
Q ss_pred CCccEEEEEcCCccccccCCCchh-----HHHHHHHH------hhCCcEEEeecCCCCC-----------C-----CCCC
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVY-----DDACRRLA------VEVPAVVISVNYRRSP-----------E-----HRCP 134 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~-----~~~~~~la------~~~g~~v~~~dyr~~~-----------~-----~~~~ 134 (299)
.+..+|+++|+ ..|+.....+ ..+...+. .-.-|-|++.|--+++ + ..||
T Consensus 49 ~~~NaVli~Ha---LtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP 125 (368)
T COG2021 49 EKDNAVLICHA---LTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFP 125 (368)
T ss_pred cCCceEEEecc---ccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCC
Confidence 45689999999 2232221110 01222332 1224788888876543 2 2345
Q ss_pred -chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEE-EEecChhHHHHHHHHHHhccCCCCCCccceEEEec
Q 040187 135 -SQYEDGIDALKFIDSSFIDIQNFPACADIKQCF-LAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQ 202 (299)
Q Consensus 135 -~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~-l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~ 202 (299)
..+.|...+-+.|.+.. ..+++. |+|.||||+.|+..+..++ +.+..+|.++
T Consensus 126 ~~ti~D~V~aq~~ll~~L----------GI~~l~avvGgSmGGMqaleWa~~yP------d~V~~~i~ia 179 (368)
T COG2021 126 VITIRDMVRAQRLLLDAL----------GIKKLAAVVGGSMGGMQALEWAIRYP------DRVRRAIPIA 179 (368)
T ss_pred cccHHHHHHHHHHHHHhc----------CcceEeeeeccChHHHHHHHHHHhCh------HHHhhhheec
Confidence 35678888888887765 245655 9999999999999999844 4455555544
No 172
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=96.96 E-value=0.021 Score=51.13 Aligned_cols=103 Identities=16% Similarity=0.082 Sum_probs=61.6
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEee-cCCCCCCCCCCchhHHHHHHHHHHH-hhcCCCCCCCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISV-NYRRSPEHRCPSQYEDGIDALKFID-SSFIDIQNFPAC 160 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~-dyr~~~~~~~~~~~~D~~~a~~~l~-~~~~~~~~~~~~ 160 (299)
+-|..|||-|- +....+..+ -+..+.|+..+.+ |-|+.++.-+ ..-++....+.-++ +... .+|
T Consensus 288 KPPL~VYFSGy------R~aEGFEgy--~MMk~Lg~PfLL~~DpRleGGaFY-lGs~eyE~~I~~~I~~~L~-----~Lg 353 (511)
T TIGR03712 288 KPPLNVYFSGY------RPAEGFEGY--FMMKRLGAPFLLIGDPRLEGGAFY-LGSDEYEQGIINVIQEKLD-----YLG 353 (511)
T ss_pred CCCeEEeeccC------cccCcchhH--HHHHhcCCCeEEeeccccccceee-eCcHHHHHHHHHHHHHHHH-----HhC
Confidence 56889999882 222223322 2234557765543 5666554322 22222222222222 2221 446
Q ss_pred CCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCC
Q 040187 161 ADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGG 207 (299)
Q Consensus 161 ~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 207 (299)
.+.+.+++.|-|||..-|+..+..+ .+.|+|+-=|.+..
T Consensus 354 F~~~qLILSGlSMGTfgAlYYga~l--------~P~AIiVgKPL~NL 392 (511)
T TIGR03712 354 FDHDQLILSGLSMGTFGALYYGAKL--------SPHAIIVGKPLVNL 392 (511)
T ss_pred CCHHHeeeccccccchhhhhhcccC--------CCceEEEcCcccch
Confidence 8999999999999999999999764 57888888787653
No 173
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.94 E-value=0.013 Score=52.67 Aligned_cols=46 Identities=20% Similarity=0.304 Sum_probs=35.6
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhccCCC----CCCccceEEEecccCCC
Q 040187 162 DIKQCFLAGDSAGGNLAHNVAVLADGCNF----SRLRLNGLIAIQPFFGG 207 (299)
Q Consensus 162 d~~~i~l~G~S~GG~lA~~~a~~~~~~~~----~~~~~~~~i~~~p~~~~ 207 (299)
...+++|+|.|.||+.+..+|.++-+... ....++|+++.+|+++.
T Consensus 134 ~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp 183 (415)
T PF00450_consen 134 RSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDP 183 (415)
T ss_dssp TTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBH
T ss_pred cCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCccccc
Confidence 45689999999999999988887543321 25689999999999864
No 174
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=96.93 E-value=0.0074 Score=62.43 Aligned_cols=102 Identities=16% Similarity=0.107 Sum_probs=64.2
Q ss_pred ccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCC-CCCchhHHHHHHHHHHHhhcCCCCCCCCCCC
Q 040187 84 LPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEH-RCPSQYEDGIDALKFIDSSFIDIQNFPACAD 162 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~-~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d 162 (299)
.|.++++||.| |+ ...|..+.+.+. .++.|+.++.++.... .....+++..+.+....... ..
T Consensus 1068 ~~~l~~lh~~~---g~--~~~~~~l~~~l~--~~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~---------~~ 1131 (1296)
T PRK10252 1068 GPTLFCFHPAS---GF--AWQFSVLSRYLD--PQWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQ---------QP 1131 (1296)
T ss_pred CCCeEEecCCC---Cc--hHHHHHHHHhcC--CCCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhh---------CC
Confidence 46789999965 23 233666776663 4688999988865322 12234444444333222221 12
Q ss_pred CCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
..++.++|||+||.+|..+|.++.+. +..+..++++.+.
T Consensus 1132 ~~p~~l~G~S~Gg~vA~e~A~~l~~~---~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1132 HGPYHLLGYSLGGTLAQGIAARLRAR---GEEVAFLGLLDTW 1170 (1296)
T ss_pred CCCEEEEEechhhHHHHHHHHHHHHc---CCceeEEEEecCC
Confidence 34799999999999999999876543 2467777777653
No 175
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.73 E-value=0.0032 Score=51.49 Aligned_cols=53 Identities=23% Similarity=0.298 Sum_probs=36.8
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecc
Q 040187 141 IDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQP 203 (299)
Q Consensus 141 ~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p 203 (299)
..|++++.+... -.+.+|.+.|||-||++|...+....+. ...++..+..+.+
T Consensus 69 ~~A~~yl~~~~~--------~~~~~i~v~GHSkGGnLA~yaa~~~~~~--~~~rI~~vy~fDg 121 (224)
T PF11187_consen 69 KSALAYLKKIAK--------KYPGKIYVTGHSKGGNLAQYAAANCDDE--IQDRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHHH--------hCCCCEEEEEechhhHHHHHHHHHccHH--HhhheeEEEEeeC
Confidence 456666655542 1234699999999999999999885533 2246778887654
No 176
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.72 E-value=0.0069 Score=56.93 Aligned_cols=67 Identities=24% Similarity=0.271 Sum_probs=42.8
Q ss_pred cEEEeecCCCC----CCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHh
Q 040187 118 AVVISVNYRRS----PEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLA 185 (299)
Q Consensus 118 ~~v~~~dyr~~----~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~ 185 (299)
+..+++|+-.. -+.....+.|-+.+|++++.+...+.++.+ .-.|..|+++||||||.+|..++..-
T Consensus 133 ~DFFaVDFnEe~tAm~G~~l~dQtEYV~dAIk~ILslYr~~~e~~-~p~P~sVILVGHSMGGiVAra~~tlk 203 (973)
T KOG3724|consen 133 FDFFAVDFNEEFTAMHGHILLDQTEYVNDAIKYILSLYRGEREYA-SPLPHSVILVGHSMGGIVARATLTLK 203 (973)
T ss_pred cceEEEcccchhhhhccHhHHHHHHHHHHHHHHHHHHhhcccccC-CCCCceEEEEeccchhHHHHHHHhhh
Confidence 55666666521 112223456777888888887764211111 12378899999999999999887653
No 177
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.65 E-value=0.009 Score=45.78 Aligned_cols=42 Identities=24% Similarity=0.176 Sum_probs=30.5
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 162 DIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 162 d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
...+|.+.|||+||.+|..++....... ......++.+.|..
T Consensus 26 p~~~i~v~GHSlGg~lA~l~a~~~~~~~--~~~~~~~~~fg~p~ 67 (153)
T cd00741 26 PDYKIHVTGHSLGGALAGLAGLDLRGRG--LGRLVRVYTFGPPR 67 (153)
T ss_pred CCCeEEEEEcCHHHHHHHHHHHHHHhcc--CCCceEEEEeCCCc
Confidence 4578999999999999999998875431 12445566666543
No 178
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.62 E-value=0.0065 Score=54.20 Aligned_cols=92 Identities=18% Similarity=0.251 Sum_probs=58.4
Q ss_pred hHHHHHHHHhhCCcE----EE--eecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHH
Q 040187 105 YDDACRRLAVEVPAV----VI--SVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLA 178 (299)
Q Consensus 105 ~~~~~~~la~~~g~~----v~--~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA 178 (299)
+..++..|. +.||. ++ -.|+|+++. ..++...-++-+.+... + .+.++|+|+||||||.++
T Consensus 67 ~~~li~~L~-~~GY~~~~~l~~~pYDWR~~~~-----~~~~~~~~lk~~ie~~~-----~--~~~~kv~li~HSmGgl~~ 133 (389)
T PF02450_consen 67 FAKLIENLE-KLGYDRGKDLFAAPYDWRLSPA-----ERDEYFTKLKQLIEEAY-----K--KNGKKVVLIAHSMGGLVA 133 (389)
T ss_pred HHHHHHHHH-hcCcccCCEEEEEeechhhchh-----hHHHHHHHHHHHHHHHH-----H--hcCCcEEEEEeCCCchHH
Confidence 677888886 55654 22 368898876 22333333333333321 1 235789999999999999
Q ss_pred HHHHHHhccCCCCCCccceEEEecccCCCCC
Q 040187 179 HNVAVLADGCNFSRLRLNGLIAIQPFFGGEE 209 (299)
Q Consensus 179 ~~~a~~~~~~~~~~~~~~~~i~~~p~~~~~~ 209 (299)
..+........-....|+..|.+++.+.+..
T Consensus 134 ~~fl~~~~~~~W~~~~i~~~i~i~~p~~Gs~ 164 (389)
T PF02450_consen 134 RYFLQWMPQEEWKDKYIKRFISIGTPFGGSP 164 (389)
T ss_pred HHHHHhccchhhHHhhhhEEEEeCCCCCCCh
Confidence 9988765332101236899999988766543
No 179
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=96.62 E-value=0.011 Score=44.29 Aligned_cols=43 Identities=21% Similarity=0.090 Sum_probs=28.5
Q ss_pred CCcEEEEecChhHHHHHHHHHHhccCCCC-CCccceEEEecccC
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLADGCNFS-RLRLNGLIAIQPFF 205 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~~~~~~~-~~~~~~~i~~~p~~ 205 (299)
..+|.+.|||+||.+|..++......... ...+.++..-+|.+
T Consensus 63 ~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 63 DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 47899999999999999999886643221 23455555544544
No 180
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=96.51 E-value=0.012 Score=51.63 Aligned_cols=115 Identities=19% Similarity=0.217 Sum_probs=71.4
Q ss_pred EEecCCCCCCCccEEEEEcCC--ccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCC----CCCCCchh-HHHHHHHH
Q 040187 73 LYSPTNTTATNLPVIVYFHGG--GFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSP----EHRCPSQY-EDGIDALK 145 (299)
Q Consensus 73 i~~P~~~~~~~~p~vv~~HGG--g~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~----~~~~~~~~-~D~~~a~~ 145 (299)
-|.|.+.+--+.| ++.+|-= -|.+-+... ..++++-+. +.|..|+.++.+.-. +..+.+.+ +++..+++
T Consensus 97 qy~p~~e~v~~~P-lLiVpP~iNk~yi~Dl~~--~~s~V~~l~-~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid 172 (445)
T COG3243 97 QYKPLTEKVLKRP-LLIVPPWINKFYILDLSP--EKSLVRWLL-EQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAID 172 (445)
T ss_pred ccCCCCCccCCCc-eEeeccccCceeEEeCCC--CccHHHHHH-HcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHH
Confidence 3556655323445 4446651 111122222 245565554 889999999988532 22333334 66777888
Q ss_pred HHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 146 FIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 146 ~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
.+.+.. ..++|-++|+|.||.+++.++.....+ +++.+.++....|
T Consensus 173 ~v~~it----------g~~~InliGyCvGGtl~~~ala~~~~k-----~I~S~T~lts~~D 218 (445)
T COG3243 173 TVKDIT----------GQKDINLIGYCVGGTLLAAALALMAAK-----RIKSLTLLTSPVD 218 (445)
T ss_pred HHHHHh----------CccccceeeEecchHHHHHHHHhhhhc-----ccccceeeecchh
Confidence 887765 357899999999999988887764322 4777777665444
No 181
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=96.41 E-value=0.16 Score=42.60 Aligned_cols=119 Identities=19% Similarity=0.178 Sum_probs=79.0
Q ss_pred CCCEEEEEEecCCCCCCCccEEEEEcCCccccccC-CCchhHHHHHHHHhhCCcEEEeecCCCCC--------CCCCCch
Q 040187 66 TRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAA-NSKVYDDACRRLAVEVPAVVISVNYRRSP--------EHRCPSQ 136 (299)
Q Consensus 66 ~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~-~~~~~~~~~~~la~~~g~~v~~~dyr~~~--------~~~~~~~ 136 (299)
.+.+.+.+|--.. +++|++|-+|.=|-..-+- ......+-++.+. ++ +.|.-+|-.+.. ..++| .
T Consensus 31 ~G~v~V~V~Gd~~---~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~-~~-fcv~HV~~PGqe~gAp~~p~~y~yP-s 104 (326)
T KOG2931|consen 31 HGVVHVTVYGDPK---GNKPAIITYHDLGLNHKSCFQGFFNFPDMAEIL-EH-FCVYHVDAPGQEDGAPSFPEGYPYP-S 104 (326)
T ss_pred cccEEEEEecCCC---CCCceEEEecccccchHhHhHHhhcCHhHHHHH-hh-eEEEecCCCccccCCccCCCCCCCC-C
Confidence 4677787773221 3679999999954321110 0011122355565 43 888888877531 12333 3
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 137 YEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 137 ~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
++|+.+-+..+.++. ..+-|+=+|--+|+++-...|.. ++.++-|+|++++...
T Consensus 105 md~LAd~l~~VL~~f----------~lk~vIg~GvGAGAyIL~rFAl~------hp~rV~GLvLIn~~~~ 158 (326)
T KOG2931|consen 105 MDDLADMLPEVLDHF----------GLKSVIGMGVGAGAYILARFALN------HPERVLGLVLINCDPC 158 (326)
T ss_pred HHHHHHHHHHHHHhc----------CcceEEEecccccHHHHHHHHhc------ChhheeEEEEEecCCC
Confidence 577777777777765 45778999999999999999998 7778999999998543
No 182
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=96.30 E-value=0.5 Score=39.05 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=35.3
Q ss_pred HHHHHHHHCCCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHHH
Q 040187 249 RYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFI 293 (299)
Q Consensus 249 ~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl 293 (299)
++++..++.|.+|+...+++..|.-.+- ...+++.+.+.+|+
T Consensus 199 ~~~~~~~~~G~~V~~~~f~~S~HV~H~r---~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 199 EHAEEARRKGWDVRAEKFEDSPHVAHLR---KHPDRYWRAVDEFW 240 (240)
T ss_pred HHHHHHHHcCCeEEEecCCCCchhhhcc---cCHHHHHHHHHhhC
Confidence 8888889999999999999999976654 35788888888874
No 183
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.25 E-value=0.038 Score=48.41 Aligned_cols=72 Identities=22% Similarity=0.200 Sum_probs=56.3
Q ss_pred HHHHHHHhhCCcEEEeecCCCCCCC-CC----------------CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEE
Q 040187 107 DACRRLAVEVPAVVISVNYRRSPEH-RC----------------PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLA 169 (299)
Q Consensus 107 ~~~~~la~~~g~~v~~~dyr~~~~~-~~----------------~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~ 169 (299)
.++..+|.+.+..+|-+++|..++. +| .+++.|....+.+|++... .....|+++
T Consensus 101 GFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~--------a~~~pvIaf 172 (492)
T KOG2183|consen 101 GFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLS--------AEASPVIAF 172 (492)
T ss_pred chHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccc--------cccCcEEEe
Confidence 3678888899999999999965543 22 2456788888888877642 456889999
Q ss_pred ecChhHHHHHHHHHHhc
Q 040187 170 GDSAGGNLAHNVAVLAD 186 (299)
Q Consensus 170 G~S~GG~lA~~~a~~~~ 186 (299)
|.|.||.||++.=++++
T Consensus 173 GGSYGGMLaAWfRlKYP 189 (492)
T KOG2183|consen 173 GGSYGGMLAAWFRLKYP 189 (492)
T ss_pred cCchhhHHHHHHHhcCh
Confidence 99999999999988754
No 184
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.16 E-value=0.023 Score=45.48 Aligned_cols=88 Identities=16% Similarity=0.047 Sum_probs=60.2
Q ss_pred HHHHHHHHhhCCcEEEeecCCCCCC----CCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHH
Q 040187 106 DDACRRLAVEVPAVVISVNYRRSPE----HRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNV 181 (299)
Q Consensus 106 ~~~~~~la~~~g~~v~~~dyr~~~~----~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~ 181 (299)
-..+.....+.++..+.+..|-++. .....-.+|+..+++++..-. ....|+++|||-|..-.+.+
T Consensus 55 ~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk~D~edl~~l~~Hi~~~~----------fSt~vVL~GhSTGcQdi~yY 124 (299)
T KOG4840|consen 55 TTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLKDDVEDLKCLLEHIQLCG----------FSTDVVLVGHSTGCQDIMYY 124 (299)
T ss_pred HHHHHHHHhhccceeeeeeccccccccccccccccHHHHHHHHHHhhccC----------cccceEEEecCccchHHHHH
Confidence 3334444458899999998775543 334466788888988775543 34589999999999866666
Q ss_pred HHHhccCCCCCCccceEEEecccCCC
Q 040187 182 AVLADGCNFSRLRLNGLIAIQPFFGG 207 (299)
Q Consensus 182 a~~~~~~~~~~~~~~~~i~~~p~~~~ 207 (299)
..... .+..+.+.|+.+|+-|.
T Consensus 125 lTnt~----~~r~iraaIlqApVSDr 146 (299)
T KOG4840|consen 125 LTNTT----KDRKIRAAILQAPVSDR 146 (299)
T ss_pred HHhcc----chHHHHHHHHhCccchh
Confidence 52211 22367888888887653
No 185
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=96.12 E-value=0.029 Score=49.00 Aligned_cols=85 Identities=22% Similarity=0.295 Sum_probs=56.7
Q ss_pred ccEEEEEcC-CccccccCCCchhHHHHHHHHhhCCcEEEeec-CCCCCCCCCC-chhHHHHHHHHHHHhhcCCCCCCCCC
Q 040187 84 LPVIVYFHG-GGFAILAANSKVYDDACRRLAVEVPAVVISVN-YRRSPEHRCP-SQYEDGIDALKFIDSSFIDIQNFPAC 160 (299)
Q Consensus 84 ~p~vv~~HG-Gg~~~g~~~~~~~~~~~~~la~~~g~~v~~~d-yr~~~~~~~~-~~~~D~~~a~~~l~~~~~~~~~~~~~ 160 (299)
.-+-||+-| |||..- .......|. +.|+.|+.+| .|..-..+-| ....|....+++-..+.
T Consensus 260 d~~av~~SGDGGWr~l------Dk~v~~~l~-~~gvpVvGvdsLRYfW~~rtPe~~a~Dl~r~i~~y~~~w--------- 323 (456)
T COG3946 260 DTVAVFYSGDGGWRDL------DKEVAEALQ-KQGVPVVGVDSLRYFWSERTPEQIAADLSRLIRFYARRW--------- 323 (456)
T ss_pred ceEEEEEecCCchhhh------hHHHHHHHH-HCCCceeeeehhhhhhccCCHHHHHHHHHHHHHHHHHhh---------
Confidence 345566666 666422 245667776 8899999999 3322222223 44578888888877765
Q ss_pred CCCCcEEEEecChhHHHHHHHHHHh
Q 040187 161 ADIKQCFLAGDSAGGNLAHNVAVLA 185 (299)
Q Consensus 161 ~d~~~i~l~G~S~GG~lA~~~a~~~ 185 (299)
...++.|+|+|.|+-+--.+-.++
T Consensus 324 -~~~~~~liGySfGADvlP~~~n~L 347 (456)
T COG3946 324 -GAKRVLLIGYSFGADVLPFAYNRL 347 (456)
T ss_pred -CcceEEEEeecccchhhHHHHHhC
Confidence 468999999999998765554443
No 186
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.10 E-value=0.024 Score=49.50 Aligned_cols=101 Identities=19% Similarity=0.173 Sum_probs=58.7
Q ss_pred EEEEEcCCccccccCCCchhHHHHHHHHhhCCcE---EEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCC
Q 040187 86 VIVYFHGGGFAILAANSKVYDDACRRLAVEVPAV---VISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACAD 162 (299)
Q Consensus 86 ~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~---v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d 162 (299)
.++++||.+...+. +..+...+. ..|+. +..+++... .... ....+......++.+... . ..
T Consensus 61 pivlVhG~~~~~~~-----~~~~~~~~~-~~g~~~~~~~~~~~~~~-~~~~-~~~~~~~ql~~~V~~~l~-----~--~g 125 (336)
T COG1075 61 PIVLVHGLGGGYGN-----FLPLDYRLA-ILGWLTNGVYAFELSGG-DGTY-SLAVRGEQLFAYVDEVLA-----K--TG 125 (336)
T ss_pred eEEEEccCcCCcch-----hhhhhhhhc-chHHHhccccccccccc-CCCc-cccccHHHHHHHHHHHHh-----h--cC
Confidence 57889996432222 233333333 55665 666666633 1111 222334444444444331 1 13
Q ss_pred CCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
.+++.++|||+||.++..+..... ....++.++.+++.=
T Consensus 126 a~~v~LigHS~GG~~~ry~~~~~~----~~~~V~~~~tl~tp~ 164 (336)
T COG1075 126 AKKVNLIGHSMGGLDSRYYLGVLG----GANRVASVVTLGTPH 164 (336)
T ss_pred CCceEEEeecccchhhHHHHhhcC----ccceEEEEEEeccCC
Confidence 488999999999999998887644 225788888887643
No 187
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=96.01 E-value=0.071 Score=41.23 Aligned_cols=53 Identities=17% Similarity=0.082 Sum_probs=39.7
Q ss_pred hhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 136 QYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 136 ~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
.++|-.+.+.--.+.. ++.+++++||.|...++..+.+.. ..++|+++++|.-
T Consensus 42 ~~~dWi~~l~~~v~a~-----------~~~~vlVAHSLGc~~v~h~~~~~~------~~V~GalLVAppd 94 (181)
T COG3545 42 VLDDWIARLEKEVNAA-----------EGPVVLVAHSLGCATVAHWAEHIQ------RQVAGALLVAPPD 94 (181)
T ss_pred CHHHHHHHHHHHHhcc-----------CCCeEEEEecccHHHHHHHHHhhh------hccceEEEecCCC
Confidence 4566666665443322 455999999999999999988743 3799999999974
No 188
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.98 E-value=0.036 Score=43.71 Aligned_cols=84 Identities=13% Similarity=0.059 Sum_probs=47.0
Q ss_pred HHHHHHhhCC---cEEEeecCCCCCCC-CCC----chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHH
Q 040187 108 ACRRLAVEVP---AVVISVNYRRSPEH-RCP----SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAH 179 (299)
Q Consensus 108 ~~~~la~~~g---~~v~~~dyr~~~~~-~~~----~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~ 179 (299)
+...+....| +.+..++|.-.... .+. ...+++...++...... ...+|+|+|+|.||.++.
T Consensus 27 ~~~~l~~~~g~~~~~~~~V~YpA~~~~~~y~~S~~~G~~~~~~~i~~~~~~C----------P~~kivl~GYSQGA~V~~ 96 (179)
T PF01083_consen 27 FADALQAQPGGTSVAVQGVEYPASLGPNSYGDSVAAGVANLVRLIEEYAARC----------PNTKIVLAGYSQGAMVVG 96 (179)
T ss_dssp HHHHHHHHCTTCEEEEEE--S---SCGGSCHHHHHHHHHHHHHHHHHHHHHS----------TTSEEEEEEETHHHHHHH
T ss_pred HHHHHHhhcCCCeeEEEecCCCCCCCcccccccHHHHHHHHHHHHHHHHHhC----------CCCCEEEEecccccHHHH
Confidence 3444444444 55666778854333 222 23344444555444444 246899999999999999
Q ss_pred HHHHH--hccCCCCCCccceEEEecc
Q 040187 180 NVAVL--ADGCNFSRLRLNGLIAIQP 203 (299)
Q Consensus 180 ~~a~~--~~~~~~~~~~~~~~i~~~p 203 (299)
.++.. .... ...++.+++++.-
T Consensus 97 ~~~~~~~l~~~--~~~~I~avvlfGd 120 (179)
T PF01083_consen 97 DALSGDGLPPD--VADRIAAVVLFGD 120 (179)
T ss_dssp HHHHHTTSSHH--HHHHEEEEEEES-
T ss_pred HHHHhccCChh--hhhhEEEEEEecC
Confidence 98876 1111 2247889998863
No 189
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=95.97 E-value=0.13 Score=43.69 Aligned_cols=41 Identities=17% Similarity=0.138 Sum_probs=35.8
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhc
Q 040187 137 YEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLAD 186 (299)
Q Consensus 137 ~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~ 186 (299)
.+.+..|+++|..+.+ ..++|+++|+|-|++.|-.+|..++
T Consensus 104 ~~nI~~AYrFL~~~ye---------pGD~Iy~FGFSRGAf~aRVlagmir 144 (423)
T COG3673 104 VQNIREAYRFLIFNYE---------PGDEIYAFGFSRGAFSARVLAGMIR 144 (423)
T ss_pred HHHHHHHHHHHHHhcC---------CCCeEEEeeccchhHHHHHHHHHHH
Confidence 3678899999999985 5689999999999999999998754
No 190
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=95.91 E-value=0.4 Score=43.44 Aligned_cols=47 Identities=17% Similarity=0.170 Sum_probs=36.1
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhccCC----CCCCccceEEEecccCCCC
Q 040187 162 DIKQCFLAGDSAGGNLAHNVAVLADGCN----FSRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 162 d~~~i~l~G~S~GG~lA~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~~ 208 (299)
...+++++|.|.||+.+..+|.+..+.. .....++|+++-.|+++..
T Consensus 163 ~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~ 213 (433)
T PLN03016 163 FSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMD 213 (433)
T ss_pred cCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCch
Confidence 3467999999999998888887764321 1245889999999988654
No 191
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.86 E-value=0.032 Score=45.86 Aligned_cols=43 Identities=21% Similarity=0.091 Sum_probs=30.5
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 162 DIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 162 d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
...+|.+.|||+||.+|..++..+.... ....+.++..-+|.+
T Consensus 126 p~~~i~vtGHSLGGaiA~l~a~~l~~~~-~~~~i~~~tFg~P~v 168 (229)
T cd00519 126 PDYKIIVTGHSLGGALASLLALDLRLRG-PGSDVTVYTFGQPRV 168 (229)
T ss_pred CCceEEEEccCHHHHHHHHHHHHHHhhC-CCCceEEEEeCCCCC
Confidence 3578999999999999999998765431 123466665555654
No 192
>PLN02209 serine carboxypeptidase
Probab=95.86 E-value=0.31 Score=44.16 Aligned_cols=47 Identities=19% Similarity=0.208 Sum_probs=35.9
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhccCC----CCCCccceEEEecccCCCC
Q 040187 162 DIKQCFLAGDSAGGNLAHNVAVLADGCN----FSRLRLNGLIAIQPFFGGE 208 (299)
Q Consensus 162 d~~~i~l~G~S~GG~lA~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~~ 208 (299)
...+++|+|.|.||+.+..+|....+.. .....++|+++.+|+++..
T Consensus 165 ~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~ 215 (437)
T PLN02209 165 LSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIE 215 (437)
T ss_pred cCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChh
Confidence 3457999999999998888887764321 1246889999999998754
No 193
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=95.82 E-value=0.094 Score=41.77 Aligned_cols=84 Identities=17% Similarity=0.180 Sum_probs=51.5
Q ss_pred hHHHHHHHHhhCCcEEEeecCCCCCCC-CCCchhHHHHH-HHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHH
Q 040187 105 YDDACRRLAVEVPAVVISVNYRRSPEH-RCPSQYEDGID-ALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVA 182 (299)
Q Consensus 105 ~~~~~~~la~~~g~~v~~~dyr~~~~~-~~~~~~~D~~~-a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a 182 (299)
+..+...+. ..+.|+.+++.+.... ..+..+++..+ ....+.+.. ...++.++|||+||.+|..++
T Consensus 15 ~~~~~~~l~--~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~----------~~~~~~l~g~s~Gg~~a~~~a 82 (212)
T smart00824 15 YARLAAALR--GRRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRAA----------GGRPFVLVGHSSGGLLAHAVA 82 (212)
T ss_pred HHHHHHhcC--CCccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHhc----------CCCCeEEEEECHHHHHHHHHH
Confidence 556666664 2578888888754322 22333444333 223333321 245689999999999999999
Q ss_pred HHhccCCCCCCccceEEEecc
Q 040187 183 VLADGCNFSRLRLNGLIAIQP 203 (299)
Q Consensus 183 ~~~~~~~~~~~~~~~~i~~~p 203 (299)
.+..+.+ ..+.+++++.+
T Consensus 83 ~~l~~~~---~~~~~l~~~~~ 100 (212)
T smart00824 83 ARLEARG---IPPAAVVLLDT 100 (212)
T ss_pred HHHHhCC---CCCcEEEEEcc
Confidence 8765432 35777776654
No 194
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=95.75 E-value=0.18 Score=45.81 Aligned_cols=103 Identities=23% Similarity=0.227 Sum_probs=63.1
Q ss_pred EEEEecCCC--CCCCccEEEEE----cCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHH
Q 040187 71 FRLYSPTNT--TATNLPVIVYF----HGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDAL 144 (299)
Q Consensus 71 ~~i~~P~~~--~~~~~p~vv~~----HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~ 144 (299)
++|.-|.+. +..++|+||.= ||-| +.|-+.. ..... |.+.|..|.-+.+.-.|+.. +.++|+..|.
T Consensus 54 lrI~pp~~~~~d~~krP~vViDPRAGHGpG-IGGFK~d---SevG~--AL~~GHPvYFV~F~p~P~pg--QTl~DV~~ae 125 (581)
T PF11339_consen 54 LRITPPEGVPVDPTKRPFVVIDPRAGHGPG-IGGFKPD---SEVGV--ALRAGHPVYFVGFFPEPEPG--QTLEDVMRAE 125 (581)
T ss_pred EEeECCCCCCCCCCCCCeEEeCCCCCCCCC-ccCCCcc---cHHHH--HHHcCCCeEEEEecCCCCCC--CcHHHHHHHH
Confidence 345545443 33678888864 5533 2222221 22222 33669888888877655443 4678887765
Q ss_pred HHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhc
Q 040187 145 KFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLAD 186 (299)
Q Consensus 145 ~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~ 186 (299)
....+... ..+-+..+.+|+|-+.||..++.+|....
T Consensus 126 ~~Fv~~V~-----~~hp~~~kp~liGnCQgGWa~~mlAA~~P 162 (581)
T PF11339_consen 126 AAFVEEVA-----ERHPDAPKPNLIGNCQGGWAAMMLAALRP 162 (581)
T ss_pred HHHHHHHH-----HhCCCCCCceEEeccHHHHHHHHHHhcCc
Confidence 54443321 22334558999999999999999998744
No 195
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=95.43 E-value=0.083 Score=47.64 Aligned_cols=65 Identities=25% Similarity=0.249 Sum_probs=45.9
Q ss_pred chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCCC
Q 040187 135 SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFGG 207 (299)
Q Consensus 135 ~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~~ 207 (299)
..-+|+..+.+.+.+... ++.-...+.+|+|.|.||+-+..+|..+.++. ...++++++++++..
T Consensus 174 ~~~~D~~~~~~~f~~~fp-----~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~---~~~~~~~nlssvlig 238 (498)
T COG2939 174 GAGKDVYSFLRLFFDKFP-----HYARLLSPKFLAGESYGGHYIPVFAHELLEDN---IALNGNVNLSSVLIG 238 (498)
T ss_pred ccchhHHHHHHHHHHHHH-----HHhhhcCceeEeeccccchhhHHHHHHHHHhc---cccCCceEeeeeeec
Confidence 445788888887776653 22234468999999999999999998876532 346677777766543
No 196
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=95.39 E-value=0.23 Score=44.94 Aligned_cols=88 Identities=16% Similarity=0.146 Sum_probs=55.5
Q ss_pred hHHHHHH-HHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCC----CCCCccceEEEecccCCCCCCC
Q 040187 137 YEDGIDA-LKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCN----FSRLRLNGLIAIQPFFGGEERT 211 (299)
Q Consensus 137 ~~D~~~a-~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~~~~~ 211 (299)
.+|.+.+ .+|+.+..+ ...+.++|.|.|.+|+..-.+|...-+.. .....++|+++-.|+++.....
T Consensus 148 A~d~~~FL~~wf~kfPe--------y~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~ 219 (454)
T KOG1282|consen 148 AKDNYEFLQKWFEKFPE--------YKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDY 219 (454)
T ss_pred HHHHHHHHHHHHHhChh--------hcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccCccccc
Confidence 3555544 356666553 35678999999999999888888754321 2346899999999998866544
Q ss_pred hHHHhhcC-CCCcchhhHHHHH
Q 040187 212 ESEMRFQR-DPLVGLKLTDWMW 232 (299)
Q Consensus 212 ~~~~~~~~-~~~~~~~~~~~~~ 232 (299)
.....+.- ..+++.+..+.+.
T Consensus 220 ~~~~~~a~~h~liSde~~~~l~ 241 (454)
T KOG1282|consen 220 NGRIPFAWGHGLISDELYESLK 241 (454)
T ss_pred cchhhhhhhcccCCHHHHHHHH
Confidence 33322221 3344444444443
No 197
>PLN02454 triacylglycerol lipase
Probab=95.38 E-value=0.061 Score=47.69 Aligned_cols=61 Identities=16% Similarity=0.183 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCC--CCCccceEEEecccCC
Q 040187 138 EDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNF--SRLRLNGLIAIQPFFG 206 (299)
Q Consensus 138 ~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~--~~~~~~~~i~~~p~~~ 206 (299)
+++...++-+.+... -..-+|.+.|||+||.||+..|..+...+. ....+.++..-+|-+.
T Consensus 210 ~qvl~~V~~l~~~Yp--------~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 210 SQLLAKIKELLERYK--------DEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVG 272 (414)
T ss_pred HHHHHHHHHHHHhCC--------CCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCccc
Confidence 455555665555431 122259999999999999999987654322 1123555555566543
No 198
>PLN02408 phospholipase A1
Probab=94.96 E-value=0.085 Score=46.14 Aligned_cols=26 Identities=23% Similarity=0.111 Sum_probs=21.9
Q ss_pred CCcEEEEecChhHHHHHHHHHHhccC
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLADGC 188 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~~~~ 188 (299)
..+|.+.|||+||.||...|..+...
T Consensus 199 ~~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 199 PLSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred CceEEEeccchHHHHHHHHHHHHHHh
Confidence 34699999999999999999876543
No 199
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=94.90 E-value=0.44 Score=39.55 Aligned_cols=103 Identities=17% Similarity=0.127 Sum_probs=61.9
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhH-HHHHHHHHHHhhcCCCCCCCCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYE-DGIDALKFIDSSFIDIQNFPACA 161 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~-D~~~a~~~l~~~~~~~~~~~~~~ 161 (299)
..|+|+ +||=| .+..+.....+.+.+-.-.|..|.+.+---.-+..+-..+. .+..+-+.+....+
T Consensus 23 ~~P~ii-~HGig---d~c~~~~~~~~~q~l~~~~g~~v~~leig~g~~~s~l~pl~~Qv~~~ce~v~~m~~--------- 89 (296)
T KOG2541|consen 23 PVPVIV-WHGIG---DSCSSLSMANLTQLLEELPGSPVYCLEIGDGIKDSSLMPLWEQVDVACEKVKQMPE--------- 89 (296)
T ss_pred cCCEEE-EeccC---cccccchHHHHHHHHHhCCCCeeEEEEecCCcchhhhccHHHHHHHHHHHHhcchh---------
Confidence 367555 89932 12222335667777766778999888865432233333333 33333444443331
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecc
Q 040187 162 DIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQP 203 (299)
Q Consensus 162 d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p 203 (299)
-++-+.++|.|.||-+|-.++....+ ..++..|.+++
T Consensus 90 lsqGynivg~SQGglv~Raliq~cd~-----ppV~n~ISL~g 126 (296)
T KOG2541|consen 90 LSQGYNIVGYSQGGLVARALIQFCDN-----PPVKNFISLGG 126 (296)
T ss_pred ccCceEEEEEccccHHHHHHHHhCCC-----CCcceeEeccC
Confidence 24568899999999999999987643 35666776654
No 200
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=94.67 E-value=0.35 Score=40.77 Aligned_cols=119 Identities=17% Similarity=0.214 Sum_probs=67.7
Q ss_pred CCCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCch-hHHHHHHHHhhCCcEEEeecCCCCCCC--------CCCch
Q 040187 66 TRDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKV-YDDACRRLAVEVPAVVISVNYRRSPEH--------RCPSQ 136 (299)
Q Consensus 66 ~~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~-~~~~~~~la~~~g~~v~~~dyr~~~~~--------~~~~~ 136 (299)
-+.+.+.++-... +++|++|=+|.=|-.--+-.... ...-++.+ ...+.++=+|.++..+. .+| .
T Consensus 8 ~G~v~V~v~G~~~---~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i--~~~f~i~Hi~aPGqe~ga~~~p~~y~yP-s 81 (283)
T PF03096_consen 8 YGSVHVTVQGDPK---GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEI--LQNFCIYHIDAPGQEEGAATLPEGYQYP-S 81 (283)
T ss_dssp TEEEEEEEESS-----TTS-EEEEE--TT--HHHHCHHHHCSHHHHHH--HTTSEEEEEE-TTTSTT-----TT------
T ss_pred ceEEEEEEEecCC---CCCceEEEeccccccchHHHHHHhcchhHHHH--hhceEEEEEeCCCCCCCccccccccccc-C
Confidence 4456666663221 37899999999542211100000 01224455 34799999998875332 233 3
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 137 YEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 137 ~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
+++..+.+..+.++. ..+.++-+|--+||++-+.+|.. .+.++.|+|+++|...
T Consensus 82 md~LAe~l~~Vl~~f----------~lk~vIg~GvGAGAnIL~rfAl~------~p~~V~GLiLvn~~~~ 135 (283)
T PF03096_consen 82 MDQLAEMLPEVLDHF----------GLKSVIGFGVGAGANILARFALK------HPERVLGLILVNPTCT 135 (283)
T ss_dssp HHHHHCTHHHHHHHH----------T---EEEEEETHHHHHHHHHHHH------SGGGEEEEEEES---S
T ss_pred HHHHHHHHHHHHHhC----------CccEEEEEeeccchhhhhhcccc------CccceeEEEEEecCCC
Confidence 466666666666665 35679999999999999999998 6678999999998543
No 201
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=94.48 E-value=0.091 Score=48.58 Aligned_cols=92 Identities=11% Similarity=0.081 Sum_probs=54.0
Q ss_pred hHHHHHHHHhhCCcE-----EEeecCCCCCCCCC--CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHH
Q 040187 105 YDDACRRLAVEVPAV-----VISVNYRRSPEHRC--PSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNL 177 (299)
Q Consensus 105 ~~~~~~~la~~~g~~-----v~~~dyr~~~~~~~--~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~l 177 (299)
+..++..|+ +.||. ....|+|+++...- ...+......++.+.+.. ..++|+|+||||||.+
T Consensus 158 w~kLIe~L~-~iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~n----------ggkKVVLV~HSMGglv 226 (642)
T PLN02517 158 WAVLIANLA-RIGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATN----------GGKKVVVVPHSMGVLY 226 (642)
T ss_pred HHHHHHHHH-HcCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHc----------CCCeEEEEEeCCchHH
Confidence 356778887 66764 34556676643211 122344444455443322 2478999999999999
Q ss_pred HHHHHHHhccCC---------CCCCccceEEEecccCCC
Q 040187 178 AHNVAVLADGCN---------FSRLRLNGLIAIQPFFGG 207 (299)
Q Consensus 178 A~~~a~~~~~~~---------~~~~~~~~~i~~~p~~~~ 207 (299)
++.+........ -...-|+..|.++|.+.+
T Consensus 227 ~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 227 FLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred HHHHHHhccccccccCCcchHHHHHHHHHheecccccCC
Confidence 998766422100 011257888888876543
No 202
>PLN02802 triacylglycerol lipase
Probab=94.40 E-value=0.13 Score=46.71 Aligned_cols=25 Identities=32% Similarity=0.302 Sum_probs=21.5
Q ss_pred CcEEEEecChhHHHHHHHHHHhccC
Q 040187 164 KQCFLAGDSAGGNLAHNVAVLADGC 188 (299)
Q Consensus 164 ~~i~l~G~S~GG~lA~~~a~~~~~~ 188 (299)
-+|.+.|||+||.+|...|..+...
T Consensus 330 ~sI~VTGHSLGGALAtLaA~dL~~~ 354 (509)
T PLN02802 330 LSITVTGHSLGAALALLVADELATC 354 (509)
T ss_pred ceEEEeccchHHHHHHHHHHHHHHh
Confidence 4799999999999999999876544
No 203
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=94.01 E-value=0.53 Score=38.58 Aligned_cols=63 Identities=22% Similarity=0.184 Sum_probs=42.9
Q ss_pred CcEEEeecCCCC-------CCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhcc
Q 040187 117 PAVVISVNYRRS-------PEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADG 187 (299)
Q Consensus 117 g~~v~~~dyr~~-------~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~ 187 (299)
|+.+..++|.-+ +..++...+.+..+.+.-...... ...++++|+|+|+|+.+|.....++..
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~--------~~~~~vvV~GySQGA~Va~~~~~~l~~ 71 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAI--------AAGGPVVVFGYSQGAVVASNVLRRLAA 71 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhc--------cCCCCEEEEEECHHHHHHHHHHHHHHh
Confidence 567778888742 233455556666666555544421 156789999999999999998887654
No 204
>PLN02571 triacylglycerol lipase
Probab=93.92 E-value=0.2 Score=44.50 Aligned_cols=41 Identities=17% Similarity=0.145 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhc
Q 040187 138 EDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLAD 186 (299)
Q Consensus 138 ~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~ 186 (299)
+++.+.++-+.+... -..-+|.+.|||+||.||...|..+.
T Consensus 208 ~qvl~eV~~L~~~y~--------~e~~sI~VTGHSLGGALAtLaA~dl~ 248 (413)
T PLN02571 208 DQVLNEVGRLVEKYK--------DEEISITICGHSLGAALATLNAVDIV 248 (413)
T ss_pred HHHHHHHHHHHHhcC--------cccccEEEeccchHHHHHHHHHHHHH
Confidence 445555555554431 11236999999999999999998754
No 205
>PLN02606 palmitoyl-protein thioesterase
Probab=93.89 E-value=1 Score=38.45 Aligned_cols=35 Identities=11% Similarity=0.197 Sum_probs=27.3
Q ss_pred cEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecc
Q 040187 165 QCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQP 203 (299)
Q Consensus 165 ~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p 203 (299)
-+-++|+|.||.++-.++.+..+. ..++-.|.+++
T Consensus 96 G~naIGfSQGglflRa~ierc~~~----p~V~nlISlgg 130 (306)
T PLN02606 96 GYNIVAESQGNLVARGLIEFCDNA----PPVINYVSLGG 130 (306)
T ss_pred ceEEEEEcchhHHHHHHHHHCCCC----CCcceEEEecC
Confidence 488999999999999999987531 35677776654
No 206
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=93.83 E-value=0.12 Score=43.63 Aligned_cols=37 Identities=14% Similarity=0.069 Sum_probs=29.0
Q ss_pred cEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHHhhh
Q 040187 260 DAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICSQA 297 (299)
Q Consensus 260 ~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~~~ 297 (299)
+.+...++++.|...... .....+.++++.+|+.+++
T Consensus 262 ~~~~~~~~~~~H~~~~~~-~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 262 PKKLLFVPGGGHIDLYDN-PPAVEQALDKLAEFLERHL 298 (299)
T ss_pred CceEEEecCCccccccCc-cHHHHHHHHHHHHHHHHhc
Confidence 778899999999776522 1455689999999999876
No 207
>PLN02633 palmitoyl protein thioesterase family protein
Probab=93.79 E-value=1.1 Score=38.37 Aligned_cols=104 Identities=13% Similarity=0.146 Sum_probs=55.4
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchh-HHHHHHHHHHHhhcCCCCCCCCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQY-EDGIDALKFIDSSFIDIQNFPACA 161 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~-~D~~~a~~~l~~~~~~~~~~~~~~ 161 (299)
+.|+|| .||=|=. -.......+...+..-.|.-+.++.---+.+..|-..+ +.+..+-+-|.... .+
T Consensus 25 ~~P~Vi-wHG~GD~---c~~~g~~~~~~l~~~~~g~~~~~i~ig~~~~~s~~~~~~~Qve~vce~l~~~~----~l---- 92 (314)
T PLN02633 25 SVPFIM-LHGIGTQ---CSDATNANFTQLLTNLSGSPGFCLEIGNGVGDSWLMPLTQQAEIACEKVKQMK----EL---- 92 (314)
T ss_pred CCCeEE-ecCCCcc---cCCchHHHHHHHHHhCCCCceEEEEECCCccccceeCHHHHHHHHHHHHhhch----hh----
Confidence 567555 7993311 11112344444443334666666544333334433222 22222333333322 11
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecc
Q 040187 162 DIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQP 203 (299)
Q Consensus 162 d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p 203 (299)
.+=+-++|+|.||.++-.++.+..+. ..++-.|.+++
T Consensus 93 -~~G~naIGfSQGGlflRa~ierc~~~----p~V~nlISlgg 129 (314)
T PLN02633 93 -SQGYNIVGRSQGNLVARGLIEFCDGG----PPVYNYISLAG 129 (314)
T ss_pred -hCcEEEEEEccchHHHHHHHHHCCCC----CCcceEEEecC
Confidence 23488999999999999999987531 35777777654
No 208
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=93.75 E-value=0.97 Score=40.91 Aligned_cols=118 Identities=16% Similarity=0.099 Sum_probs=74.3
Q ss_pred EEEecCCCCCCCccEEEEEcCCccccccCCCchh-HHHHHHHHhhCCcEEEeecCCCCCCC-CC-------------Cch
Q 040187 72 RLYSPTNTTATNLPVIVYFHGGGFAILAANSKVY-DDACRRLAVEVPAVVISVNYRRSPEH-RC-------------PSQ 136 (299)
Q Consensus 72 ~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~~-~~~~~~la~~~g~~v~~~dyr~~~~~-~~-------------~~~ 136 (299)
+.|.+...-....|+-++|-|-|-.. ..+-.+ ......+|.+.|..|+.+++|..++. +. .++
T Consensus 74 ~~y~n~~~~~~~gPiFLmIGGEgp~~--~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QA 151 (514)
T KOG2182|consen 74 RFYNNNQWAKPGGPIFLMIGGEGPES--DKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQA 151 (514)
T ss_pred heeeccccccCCCceEEEEcCCCCCC--CCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccchhhhhHHHH
Confidence 34555543224568888887755332 111111 12456677899999999999975532 11 145
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCC-CCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 137 YEDGIDALKFIDSSFIDIQNFPACA-DIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 137 ~~D~~~a~~~l~~~~~~~~~~~~~~-d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
+.|+...++.+.... +. +..+.+.+|.|.=|.||++.-.+ .|..+.|.|.=|..+
T Consensus 152 LaDla~fI~~~n~k~--------n~~~~~~WitFGgSYsGsLsAW~R~~------yPel~~GsvASSapv 207 (514)
T KOG2182|consen 152 LADLAEFIKAMNAKF--------NFSDDSKWITFGGSYSGSLSAWFREK------YPELTVGSVASSAPV 207 (514)
T ss_pred HHHHHHHHHHHHhhc--------CCCCCCCeEEECCCchhHHHHHHHHh------Cchhheeecccccce
Confidence 677777777765433 22 33589999999999999999887 445566666554433
No 209
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=93.70 E-value=1.1 Score=41.30 Aligned_cols=119 Identities=18% Similarity=0.199 Sum_probs=74.7
Q ss_pred CCEEEEEEecCCCCCCCccEEEEEcCCccccccCCCch-hHHHHHHHHhhCCcEEEeecCCCCCC-----CCCC---c--
Q 040187 67 RDLWFRLYSPTNTTATNLPVIVYFHGGGFAILAANSKV-YDDACRRLAVEVPAVVISVNYRRSPE-----HRCP---S-- 135 (299)
Q Consensus 67 ~~i~~~i~~P~~~~~~~~p~vv~~HGGg~~~g~~~~~~-~~~~~~~la~~~g~~v~~~dyr~~~~-----~~~~---~-- 135 (299)
..|.+.++.|.+-. + -.+.+=||||. |...... ...+.. +.+.||++++-|--.... ..+- .
T Consensus 15 ~~i~fev~LP~~WN-g---R~~~~GgGG~~-G~i~~~~~~~~~~~--~~~~G~A~~~TD~Gh~~~~~~~~~~~~~n~~~~ 87 (474)
T PF07519_consen 15 PNIRFEVWLPDNWN-G---RFLQVGGGGFA-GGINYADGKASMAT--ALARGYATASTDSGHQGSAGSDDASFGNNPEAL 87 (474)
T ss_pred ceEEEEEECChhhc-c---CeEEECCCeee-Ccccccccccccch--hhhcCeEEEEecCCCCCCcccccccccCCHHHH
Confidence 37888999999542 1 25556667775 4433321 001222 237799999988543221 1111 1
Q ss_pred ------hhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 136 ------QYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 136 ------~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
.+.+...+-+.|.+.. |+..+++-+..|-|-||.-++..|++ .|..+.|+|.-+|.+
T Consensus 88 ~dfa~ra~h~~~~~aK~l~~~~-------Yg~~p~~sY~~GcS~GGRqgl~~AQr------yP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 88 LDFAYRALHETTVVAKALIEAF-------YGKAPKYSYFSGCSTGGRQGLMAAQR------YPEDFDGILAGAPAI 150 (474)
T ss_pred HHHHhhHHHHHHHHHHHHHHHH-------hCCCCCceEEEEeCCCcchHHHHHHh------ChhhcCeEEeCCchH
Confidence 1223333334444433 35678999999999999999999999 566799999999854
No 210
>PLN03037 lipase class 3 family protein; Provisional
Probab=93.15 E-value=0.34 Score=44.17 Aligned_cols=24 Identities=33% Similarity=0.228 Sum_probs=20.6
Q ss_pred CCcEEEEecChhHHHHHHHHHHhc
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLAD 186 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~~ 186 (299)
..+|.|.|||+||.+|...|..+.
T Consensus 317 ~~SItVTGHSLGGALAtLaA~DIa 340 (525)
T PLN03037 317 EVSLTITGHSLGGALALLNAYEAA 340 (525)
T ss_pred cceEEEeccCHHHHHHHHHHHHHH
Confidence 357999999999999999997654
No 211
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=92.99 E-value=0.53 Score=39.66 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=26.3
Q ss_pred CcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecc
Q 040187 164 KQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQP 203 (299)
Q Consensus 164 ~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p 203 (299)
+=+-++|+|.||.++-.++.++.+ ..++-+|.+++
T Consensus 80 ~G~~~IGfSQGgl~lRa~vq~c~~-----~~V~nlISlgg 114 (279)
T PF02089_consen 80 NGFNAIGFSQGGLFLRAYVQRCND-----PPVHNLISLGG 114 (279)
T ss_dssp T-EEEEEETCHHHHHHHHHHH-TS-----S-EEEEEEES-
T ss_pred cceeeeeeccccHHHHHHHHHCCC-----CCceeEEEecC
Confidence 458899999999999999998752 36788888765
No 212
>PLN00413 triacylglycerol lipase
Probab=92.83 E-value=0.22 Score=44.88 Aligned_cols=23 Identities=30% Similarity=0.433 Sum_probs=19.9
Q ss_pred CCcEEEEecChhHHHHHHHHHHh
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLA 185 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~ 185 (299)
..+|.+.|||+||.+|...|..+
T Consensus 283 ~~kliVTGHSLGGALAtLaA~~L 305 (479)
T PLN00413 283 TSKFILSGHSLGGALAILFTAVL 305 (479)
T ss_pred CCeEEEEecCHHHHHHHHHHHHH
Confidence 46799999999999999988653
No 213
>PLN02324 triacylglycerol lipase
Probab=92.48 E-value=0.47 Score=42.22 Aligned_cols=40 Identities=18% Similarity=0.073 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHh
Q 040187 138 EDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLA 185 (299)
Q Consensus 138 ~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~ 185 (299)
+.+.+.++.+.+... -..-+|.+.|||+||.||...|..+
T Consensus 197 eqVl~eV~~L~~~Yp--------~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 197 EQVQGELKRLLELYK--------NEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHHHHHCC--------CCCceEEEecCcHHHHHHHHHHHHH
Confidence 445555666655432 1124799999999999999999765
No 214
>PLN02847 triacylglycerol lipase
Probab=92.09 E-value=0.57 Score=43.51 Aligned_cols=24 Identities=21% Similarity=0.243 Sum_probs=21.4
Q ss_pred CcEEEEecChhHHHHHHHHHHhcc
Q 040187 164 KQCFLAGDSAGGNLAHNVAVLADG 187 (299)
Q Consensus 164 ~~i~l~G~S~GG~lA~~~a~~~~~ 187 (299)
-++++.|||+||.+|..++..+++
T Consensus 251 YkLVITGHSLGGGVAALLAilLRe 274 (633)
T PLN02847 251 FKIKIVGHSLGGGTAALLTYILRE 274 (633)
T ss_pred CeEEEeccChHHHHHHHHHHHHhc
Confidence 589999999999999999988764
No 215
>PLN02310 triacylglycerol lipase
Probab=92.06 E-value=0.53 Score=41.85 Aligned_cols=23 Identities=35% Similarity=0.262 Sum_probs=20.2
Q ss_pred CcEEEEecChhHHHHHHHHHHhc
Q 040187 164 KQCFLAGDSAGGNLAHNVAVLAD 186 (299)
Q Consensus 164 ~~i~l~G~S~GG~lA~~~a~~~~ 186 (299)
.+|.+.|||+||.||...|....
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~ 231 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAA 231 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHH
Confidence 57999999999999999987654
No 216
>PLN02934 triacylglycerol lipase
Probab=92.02 E-value=0.31 Score=44.37 Aligned_cols=38 Identities=21% Similarity=0.163 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHh
Q 040187 138 EDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLA 185 (299)
Q Consensus 138 ~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~ 185 (299)
..+...++-+.+.. ...+|++.|||.||.+|...+..+
T Consensus 305 ~~v~~~lk~ll~~~----------p~~kIvVTGHSLGGALAtLaA~~L 342 (515)
T PLN02934 305 YAVRSKLKSLLKEH----------KNAKFVVTGHSLGGALAILFPTVL 342 (515)
T ss_pred HHHHHHHHHHHHHC----------CCCeEEEeccccHHHHHHHHHHHH
Confidence 34555555555543 246899999999999999998654
No 217
>PLN02753 triacylglycerol lipase
Probab=91.70 E-value=0.7 Score=42.29 Aligned_cols=24 Identities=29% Similarity=0.151 Sum_probs=21.0
Q ss_pred CCcEEEEecChhHHHHHHHHHHhc
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLAD 186 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~~ 186 (299)
.-+|.+.|||+||.||...|..+.
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla 334 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIA 334 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHH
Confidence 358999999999999999997654
No 218
>PLN02162 triacylglycerol lipase
Probab=91.69 E-value=0.37 Score=43.44 Aligned_cols=23 Identities=30% Similarity=0.397 Sum_probs=19.7
Q ss_pred CCcEEEEecChhHHHHHHHHHHh
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLA 185 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~ 185 (299)
..++++.|||.||.+|...|...
T Consensus 277 ~~kliVTGHSLGGALAtLaAa~L 299 (475)
T PLN02162 277 NLKYILTGHSLGGALAALFPAIL 299 (475)
T ss_pred CceEEEEecChHHHHHHHHHHHH
Confidence 46799999999999999987654
No 219
>PLN02719 triacylglycerol lipase
Probab=91.61 E-value=0.71 Score=42.15 Aligned_cols=25 Identities=28% Similarity=0.163 Sum_probs=21.3
Q ss_pred CCcEEEEecChhHHHHHHHHHHhcc
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLADG 187 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~~~ 187 (299)
.-+|.+.|||+||.||...|..+.+
T Consensus 297 ~~sItVTGHSLGGALAtLaA~Dl~~ 321 (518)
T PLN02719 297 ELSITVTGHSLGGALAVLSAYDVAE 321 (518)
T ss_pred cceEEEecCcHHHHHHHHHHHHHHH
Confidence 3579999999999999999977643
No 220
>PF03283 PAE: Pectinacetylesterase
Probab=91.21 E-value=0.5 Score=41.71 Aligned_cols=43 Identities=30% Similarity=0.153 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhcc
Q 040187 137 YEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADG 187 (299)
Q Consensus 137 ~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~ 187 (299)
..-..++++||..+.- .++++|+|.|.||||.-++.-+...++
T Consensus 137 ~~i~~avl~~l~~~gl--------~~a~~vlltG~SAGG~g~~~~~d~~~~ 179 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGL--------PNAKQVLLTGCSAGGLGAILHADYVRD 179 (361)
T ss_pred HHHHHHHHHHHHHhcC--------cccceEEEeccChHHHHHHHHHHHHHH
Confidence 4567788999988731 368999999999999998887776554
No 221
>PLN02761 lipase class 3 family protein
Probab=91.15 E-value=0.72 Score=42.20 Aligned_cols=24 Identities=25% Similarity=0.113 Sum_probs=20.6
Q ss_pred CCcEEEEecChhHHHHHHHHHHhc
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLAD 186 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~~ 186 (299)
.-+|.+.|||+||.||...|..+.
T Consensus 293 ~~sItVTGHSLGGALAtLaA~DIa 316 (527)
T PLN02761 293 EISITVTGHSLGASLALVSAYDIA 316 (527)
T ss_pred CceEEEeccchHHHHHHHHHHHHH
Confidence 347999999999999999987654
No 222
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=90.63 E-value=0.55 Score=39.87 Aligned_cols=43 Identities=23% Similarity=0.241 Sum_probs=34.9
Q ss_pred hhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhcc
Q 040187 136 QYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADG 187 (299)
Q Consensus 136 ~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~ 187 (299)
.-..+..++.++.++.. ..++|+++|+|-|+..|-.++.....
T Consensus 73 ~~~~I~~ay~~l~~~~~---------~gd~I~lfGFSRGA~~AR~~a~~i~~ 115 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNYE---------PGDRIYLFGFSRGAYTARAFANMIDK 115 (277)
T ss_pred hHHHHHHHHHHHHhccC---------CcceEEEEecCccHHHHHHHHHHHhh
Confidence 34567788999888763 56889999999999999999987643
No 223
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=90.58 E-value=0.66 Score=41.65 Aligned_cols=72 Identities=11% Similarity=0.048 Sum_probs=44.8
Q ss_pred hHHHHHHHHhhCCcE------EEeecCCCCCCCC--CCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHH
Q 040187 105 YDDACRRLAVEVPAV------VISVNYRRSPEHR--CPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGN 176 (299)
Q Consensus 105 ~~~~~~~la~~~g~~------v~~~dyr~~~~~~--~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~ 176 (299)
+..++..++ .-||. -...|+|++.... ....+.....-++...+.. ..++|+|++|||||.
T Consensus 126 w~~~i~~lv-~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~----------G~kkVvlisHSMG~l 194 (473)
T KOG2369|consen 126 WHELIENLV-GIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLN----------GGKKVVLISHSMGGL 194 (473)
T ss_pred HHHHHHHHH-hhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHc----------CCCceEEEecCCccH
Confidence 455666665 66665 4567888875332 1122344444444443322 238899999999999
Q ss_pred HHHHHHHHhcc
Q 040187 177 LAHNVAVLADG 187 (299)
Q Consensus 177 lA~~~a~~~~~ 187 (299)
+.+.......+
T Consensus 195 ~~lyFl~w~~~ 205 (473)
T KOG2369|consen 195 YVLYFLKWVEA 205 (473)
T ss_pred HHHHHHhcccc
Confidence 99998876543
No 224
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=90.57 E-value=0.91 Score=39.70 Aligned_cols=41 Identities=20% Similarity=0.121 Sum_probs=29.5
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCC
Q 040187 139 DGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCN 189 (299)
Q Consensus 139 D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~ 189 (299)
...+.++-|.+.. ..-+|.+.|||+||.+|...|......+
T Consensus 156 ~~~~~~~~L~~~~----------~~~~i~vTGHSLGgAlA~laa~~i~~~~ 196 (336)
T KOG4569|consen 156 GLDAELRRLIELY----------PNYSIWVTGHSLGGALASLAALDLVKNG 196 (336)
T ss_pred HHHHHHHHHHHhc----------CCcEEEEecCChHHHHHHHHHHHHHHcC
Confidence 4445555555544 2457999999999999999998866543
No 225
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=87.85 E-value=4.3 Score=32.91 Aligned_cols=35 Identities=23% Similarity=0.129 Sum_probs=25.1
Q ss_pred CCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
-++|.|+++|||=..|..+... ..++..|++++..
T Consensus 56 y~~i~lvAWSmGVw~A~~~l~~--------~~~~~aiAINGT~ 90 (213)
T PF04301_consen 56 YREIYLVAWSMGVWAANRVLQG--------IPFKRAIAINGTP 90 (213)
T ss_pred CceEEEEEEeHHHHHHHHHhcc--------CCcceeEEEECCC
Confidence 3689999999999888776432 2466667776643
No 226
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=86.44 E-value=4.2 Score=35.28 Aligned_cols=65 Identities=15% Similarity=0.059 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCC----CCCCccceEEEecccCCCCC
Q 040187 138 EDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCN----FSRLRLNGLIAIQPFFGGEE 209 (299)
Q Consensus 138 ~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~----~~~~~~~~~i~~~p~~~~~~ 209 (299)
+|...+++-..+... + ....+.+|.|.|.||+.+-.+|.+..+.. .....++|+++-.|+++...
T Consensus 32 ~d~~~fL~~Ff~~~p-----~--~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~~~ 100 (319)
T PLN02213 32 KRTHEFLQKWLSRHP-----Q--YFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDF 100 (319)
T ss_pred HHHHHHHHHHHHhCc-----c--cccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCccc
Confidence 666666654444332 1 34678999999999999999988764321 12458899999999987543
No 227
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=85.49 E-value=2 Score=36.15 Aligned_cols=23 Identities=26% Similarity=0.410 Sum_probs=20.4
Q ss_pred CCcEEEEecChhHHHHHHHHHHh
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLA 185 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~ 185 (299)
-.+|.+-|||.||.+|..+..+.
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 275 DARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CceEEEeccccchHHHHHhcccc
Confidence 46899999999999999998764
No 228
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=85.49 E-value=2 Score=36.15 Aligned_cols=23 Identities=26% Similarity=0.410 Sum_probs=20.4
Q ss_pred CCcEEEEecChhHHHHHHHHHHh
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVLA 185 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~~ 185 (299)
-.+|.+-|||.||.+|..+..+.
T Consensus 275 da~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 275 DARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred CceEEEeccccchHHHHHhcccc
Confidence 46899999999999999998764
No 229
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=83.97 E-value=19 Score=28.31 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=27.0
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEe-cccCC
Q 040187 162 DIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAI-QPFFG 206 (299)
Q Consensus 162 d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~-~p~~~ 206 (299)
...++.++|||+|..++...+.. ....+.-+|++ ||-+.
T Consensus 107 ~~~~~tv~GHSYGS~v~G~A~~~------~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 107 PDAHLTVVGHSYGSTVVGLAAQQ------GGLRVDDVVLVGSPGMG 146 (177)
T ss_pred CCCCEEEEEecchhHHHHHHhhh------CCCCcccEEEECCCCCC
Confidence 45689999999999988887765 12345455544 56554
No 230
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=82.87 E-value=5 Score=25.51 Aligned_cols=37 Identities=16% Similarity=0.261 Sum_probs=14.7
Q ss_pred ceEEEEEEcCCCCEEEEEEe-cCCC----CCCCccEEEEEcC
Q 040187 56 VTSFDVSVDATRDLWFRLYS-PTNT----TATNLPVIVYFHG 92 (299)
Q Consensus 56 ~~~~~~~~~~~~~i~~~i~~-P~~~----~~~~~p~vv~~HG 92 (299)
...++..+...++--+.+++ |.+. ...++|+|++.||
T Consensus 10 Y~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HG 51 (63)
T PF04083_consen 10 YPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHG 51 (63)
T ss_dssp ---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--
T ss_pred CCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECC
Confidence 33444444434444454443 2221 3367899999999
No 231
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=81.35 E-value=9 Score=32.37 Aligned_cols=101 Identities=18% Similarity=0.199 Sum_probs=56.0
Q ss_pred cCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCC-CC----CchhHHHHHHHHHHHhhcCCCCCCCCCCCCCc
Q 040187 91 HGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEH-RC----PSQYEDGIDALKFIDSSFIDIQNFPACADIKQ 165 (299)
Q Consensus 91 HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~-~~----~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~ 165 (299)
-|.||+.-.. ..-+..+. .-.+.++++.|...|.- .| ....+-..+.++.+.+.....+. -+.-|
T Consensus 41 TGtGWVdp~a-----~~a~E~l~-~GD~A~va~QYSylPSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~----~~RPk 110 (289)
T PF10081_consen 41 TGTGWVDPWA-----VDALEYLY-GGDVAIVAMQYSYLPSWLSFLVDRDAAREAARALFEAVYARWSTLPE----DRRPK 110 (289)
T ss_pred CCCCccCHHH-----HhHHHHHh-CCCeEEEEeccccccchHHHhcccchHHHHHHHHHHHHHHHHHhCCc----ccCCe
Confidence 4567763321 23345554 66899999999865531 11 12333444444444443321111 23457
Q ss_pred EEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 166 CFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 166 i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
++|+|.|.|+.-+...-....+. ...+.|++...|.
T Consensus 111 L~l~GeSLGa~g~~~af~~~~~~---~~~vdGalw~GpP 146 (289)
T PF10081_consen 111 LYLYGESLGAYGGEAAFDGLDDL---RDRVDGALWVGPP 146 (289)
T ss_pred EEEeccCccccchhhhhccHHHh---hhhcceEEEeCCC
Confidence 99999999998666544332221 2357888877664
No 232
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=75.27 E-value=4.9 Score=33.56 Aligned_cols=22 Identities=36% Similarity=0.593 Sum_probs=19.0
Q ss_pred CCcEEEEecChhHHHHHHHHHH
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~ 184 (299)
..+..++|-||||.+|-.+...
T Consensus 194 ~g~~~~~g~Smgg~~a~~vgS~ 215 (371)
T KOG1551|consen 194 LGNLNLVGRSMGGDIANQVGSL 215 (371)
T ss_pred cccceeeeeecccHHHHhhccc
Confidence 4679999999999999888764
No 233
>PF10686 DUF2493: Protein of unknown function (DUF2493); InterPro: IPR019627 This entry is represented by Mycobacteriophage D29, Gp61. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. Members of this family are mainly Proteobacteria. The function is not known.
Probab=71.96 E-value=9.6 Score=24.87 Aligned_cols=33 Identities=33% Similarity=0.420 Sum_probs=24.6
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEe
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVIS 122 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~ 122 (299)
..|.++++|||. ... -+.++.+.|.+.|+.++.
T Consensus 30 ~~~~~~lvhGga-----~~G--aD~iA~~wA~~~gv~~~~ 62 (71)
T PF10686_consen 30 RHPDMVLVHGGA-----PKG--ADRIAARWARERGVPVIR 62 (71)
T ss_pred hCCCEEEEECCC-----CCC--HHHHHHHHHHHCCCeeEE
Confidence 458899999953 122 478899999999987664
No 234
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=70.88 E-value=12 Score=32.73 Aligned_cols=44 Identities=9% Similarity=0.027 Sum_probs=32.2
Q ss_pred CCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccCC
Q 040187 162 DIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 162 d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~~ 206 (299)
...+|.++|||+|+.+.......+.++. ....+.-++++...+.
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~-~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERK-AFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhcc-ccCeEeeEEEecCCCC
Confidence 3456999999999999998887766542 2235788888876554
No 235
>KOG4127 consensus Renal dipeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=69.74 E-value=21 Score=31.29 Aligned_cols=76 Identities=21% Similarity=0.260 Sum_probs=52.2
Q ss_pred cEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCC
Q 040187 85 PVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADIK 164 (299)
Q Consensus 85 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~ 164 (299)
.-|||-|-..+..++.....-+..++.++ ++|=.|..--|+..-.+.-.+.+.|+.+.++++++-+ ..+
T Consensus 267 APVIFSHSsA~~vcns~rNVPDdVL~llk-~NgGvVMVnfy~~~isc~~~A~v~~v~~Hi~hIr~Va----------G~~ 335 (419)
T KOG4127|consen 267 APVIFSHSSAYSVCNSSRNVPDDVLQLLK-ENGGVVMVNFYPGFISCSDRATVSDVADHINHIRAVA----------GID 335 (419)
T ss_pred CceEeecccHHHHhcCccCCcHHHHHHHh-hcCCEEEEEeecccccCCCcccHHHHHHHHHHHHHhh----------ccc
Confidence 34778999887776665555678888887 5555544434553323444466899999999999976 367
Q ss_pred cEEEEec
Q 040187 165 QCFLAGD 171 (299)
Q Consensus 165 ~i~l~G~ 171 (299)
.|++.|.
T Consensus 336 hIGlGg~ 342 (419)
T KOG4127|consen 336 HIGLGGD 342 (419)
T ss_pred eeeccCC
Confidence 7887664
No 236
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=67.11 E-value=44 Score=34.55 Aligned_cols=96 Identities=18% Similarity=0.101 Sum_probs=57.1
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHH-HHHHhhcCCCCCCCCC
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDAL-KFIDSSFIDIQNFPAC 160 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~-~~l~~~~~~~~~~~~~ 160 (299)
...|.++|+|- +-| +...+..+|.+..+......+.- .---..++++.+.+ +-+++-.
T Consensus 2121 se~~~~Ffv~p---IEG------~tt~l~~la~rle~PaYglQ~T~---~vP~dSies~A~~yirqirkvQ--------- 2179 (2376)
T KOG1202|consen 2121 SEEPPLFFVHP---IEG------FTTALESLASRLEIPAYGLQCTE---AVPLDSIESLAAYYIRQIRKVQ--------- 2179 (2376)
T ss_pred ccCCceEEEec---ccc------chHHHHHHHhhcCCcchhhhccc---cCCcchHHHHHHHHHHHHHhcC---------
Confidence 35688999998 222 34456677766666554444432 11113444444322 2222221
Q ss_pred CCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecc
Q 040187 161 ADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQP 203 (299)
Q Consensus 161 ~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p 203 (299)
.....-+.|.|.|+.++...|..+.+.. ....+|++.+
T Consensus 2180 -P~GPYrl~GYSyG~~l~f~ma~~Lqe~~----~~~~lillDG 2217 (2376)
T KOG1202|consen 2180 -PEGPYRLAGYSYGACLAFEMASQLQEQQ----SPAPLILLDG 2217 (2376)
T ss_pred -CCCCeeeeccchhHHHHHHHHHHHHhhc----CCCcEEEecC
Confidence 3456889999999999999998876542 2345888765
No 237
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=66.68 E-value=22 Score=23.57 Aligned_cols=41 Identities=20% Similarity=0.255 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHh
Q 040187 138 EDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLA 185 (299)
Q Consensus 138 ~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~ 185 (299)
..+..-++|+.+... . -.++++.|+|-|.|=.+|..+++..
T Consensus 21 ~~V~~qI~yvk~~~~------~-~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 21 RNVENQIEYVKSQGK------I-NGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHC----------TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCC------C-CCCceEEEEecCCcccHHHHHHHHh
Confidence 566777888887652 2 2468999999999999998888764
No 238
>COG0431 Predicted flavoprotein [General function prediction only]
Probab=63.03 E-value=17 Score=28.70 Aligned_cols=66 Identities=17% Similarity=0.192 Sum_probs=46.0
Q ss_pred hHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHH
Q 040187 105 YDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 105 ~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~ 184 (299)
...+.+.++...|+.+++|.|..+ +|.. .+.+++|+.... ...+.+.+.+.|.|+.-......+
T Consensus 58 v~~~~~~i~~aD~li~~tPeYn~s----~pg~---lKnaiD~l~~~~---------~~~Kpv~~~~~s~g~~~~~~a~~~ 121 (184)
T COG0431 58 VQALREAIAAADGLIIATPEYNGS----YPGA---LKNAIDWLSREA---------LGGKPVLLLGTSGGGAGGLRAQNQ 121 (184)
T ss_pred HHHHHHHHHhCCEEEEECCccCCC----CCHH---HHHHHHhCCHhH---------hCCCcEEEEecCCCchhHHHHHHH
Confidence 456778888888999999999865 3333 566778876653 245778888888877766655554
Q ss_pred hc
Q 040187 185 AD 186 (299)
Q Consensus 185 ~~ 186 (299)
++
T Consensus 122 Lr 123 (184)
T COG0431 122 LR 123 (184)
T ss_pred HH
Confidence 43
No 239
>TIGR02690 resist_ArsH arsenical resistance protein ArsH. Members of this protein family occur in arsenate resistance operons that include at least two different types of arsenate reductase. ArsH is not required for arsenate resistance in some systems. This family belongs to the larger family of NADPH-dependent FMN reductases (Pfam model pfam03358). The function of ArsH is not known.
Probab=60.63 E-value=22 Score=28.96 Aligned_cols=58 Identities=14% Similarity=-0.034 Sum_probs=34.6
Q ss_pred HHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChh
Q 040187 106 DDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAG 174 (299)
Q Consensus 106 ~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~G 174 (299)
..+.+.+..+.|+.+++|.|-.+ +|.. .+.+++|+...... ......+.++++|.|.|
T Consensus 82 ~~l~~~v~~ADgvii~TPEYn~s----ipg~---LKNaiDwls~~~~~----~~~~~~KpvaivgaSgg 139 (219)
T TIGR02690 82 RELRQLSEWSEGQVWCSPERHGA----ITGS---QKDQIDWIPLSVGP----VRPTQGKTLAVMQVSGG 139 (219)
T ss_pred HHHHHHHHhCCEEEEeCCccccC----cCHH---HHHHHHhcccCccc----ccccCCCcEEEEEeCCc
Confidence 44556666667788888888754 2333 45677788653100 00134577999998843
No 240
>COG4425 Predicted membrane protein [Function unknown]
Probab=60.48 E-value=27 Score=31.66 Aligned_cols=80 Identities=18% Similarity=0.165 Sum_probs=44.5
Q ss_pred EEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCC---------CCCCCCchhHHH-HHHHHHHHhhcCCCC
Q 040187 86 VIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRS---------PEHRCPSQYEDG-IDALKFIDSSFIDIQ 155 (299)
Q Consensus 86 ~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~---------~~~~~~~~~~D~-~~a~~~l~~~~~~~~ 155 (299)
+|+.--|.||+.-. -..-...+. .-.++.++++|..- |+++..+. +.. .+.+.++....+
T Consensus 324 vVv~~TGTGWIdp~-----a~~t~EyL~-~Gd~asVsmQYSyL~SwLSllvdpdyg~~aa-~aLf~aVy~yw~qLP~--- 393 (588)
T COG4425 324 VVVTSTGTGWIDPA-----AADTLEYLY-NGDVASVSMQYSYLPSWLSLLVDPDYGADAA-RALFEAVYGYWTQLPK--- 393 (588)
T ss_pred EEEcCCCCCCCCHH-----HHhHHHHHh-CCceEEEEEehhhHHHHHHHhcCCCcchhHH-HHHHHHHHHHHHhCCc---
Confidence 44455677776322 123345554 66788999999842 33332211 112 233344444442
Q ss_pred CCCCCCCCCcEEEEecChhHHHHHH
Q 040187 156 NFPACADIKQCFLAGDSAGGNLAHN 180 (299)
Q Consensus 156 ~~~~~~d~~~i~l~G~S~GG~lA~~ 180 (299)
-..-+.++.|.|.|++-...
T Consensus 394 -----~sRPKLylhG~SLGa~~s~~ 413 (588)
T COG4425 394 -----SSRPKLYLHGESLGAMGSEA 413 (588)
T ss_pred -----CCCCceEEeccccccccCcc
Confidence 23457999999999875444
No 241
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=60.43 E-value=29 Score=30.69 Aligned_cols=60 Identities=15% Similarity=0.197 Sum_probs=36.7
Q ss_pred CcEEEeecCCCCCCCCCC--chhHHHHH--HHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhc
Q 040187 117 PAVVISVNYRRSPEHRCP--SQYEDGID--ALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLAD 186 (299)
Q Consensus 117 g~~v~~~dyr~~~~~~~~--~~~~D~~~--a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~ 186 (299)
-+.|++|...+.+-+..+ ....-+.- .++-| .++..-++.+|-|.-.|..++..+|...+
T Consensus 188 ~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkL----------MlRLg~nkffiqGgDwGSiI~snlasLyP 251 (469)
T KOG2565|consen 188 AFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKL----------MLRLGYNKFFIQGGDWGSIIGSNLASLYP 251 (469)
T ss_pred eEEEeccCCCCcccCcCCccCCccHHHHHHHHHHH----------HHHhCcceeEeecCchHHHHHHHHHhhcc
Confidence 477898888765433222 12222211 12212 22345688999999999999999998754
No 242
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=59.89 E-value=14 Score=30.49 Aligned_cols=34 Identities=26% Similarity=0.078 Sum_probs=26.1
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHH
Q 040187 142 DALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 142 ~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~ 184 (299)
-+++.|.++. +.++.-.++|-|+|+..|..++..
T Consensus 16 GVl~~L~e~g---------i~~~~~~i~G~SAGAl~aa~~asg 49 (233)
T cd07224 16 GVLSLLIEAG---------VINETTPLAGASAGSLAAACSASG 49 (233)
T ss_pred HHHHHHHHcC---------CCCCCCEEEEEcHHHHHHHHHHcC
Confidence 4567777765 345566899999999999999864
No 243
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=58.30 E-value=33 Score=32.31 Aligned_cols=26 Identities=31% Similarity=0.334 Sum_probs=20.5
Q ss_pred CCCCcEEEEecChhHHHHHHHHHHhc
Q 040187 161 ADIKQCFLAGDSAGGNLAHNVAVLAD 186 (299)
Q Consensus 161 ~d~~~i~l~G~S~GG~lA~~~a~~~~ 186 (299)
.|...|+-+||||||-+|=.+....-
T Consensus 523 G~~RPivwI~HSmGGLl~K~lLlda~ 548 (697)
T KOG2029|consen 523 GDDRPIVWIGHSMGGLLAKKLLLDAY 548 (697)
T ss_pred CCCCceEEEecccchHHHHHHHHHHh
Confidence 34677999999999988877776543
No 244
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=52.52 E-value=16 Score=29.57 Aligned_cols=42 Identities=10% Similarity=0.216 Sum_probs=25.1
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRR 127 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~ 127 (299)
+.+.|.|+.-.+ ++.....|..-.+....+.|+.+..++...
T Consensus 31 ~~~~i~FIPtAs---~~~~~~~Yv~k~~~~l~~lg~~v~~L~l~~ 72 (224)
T COG3340 31 KRKTIAFIPTAS---VDSEDDFYVEKVRNALAKLGLEVSELHLSK 72 (224)
T ss_pred CCceEEEEecCc---cccchHHHHHHHHHHHHHcCCeeeeeeccC
Confidence 356777777643 233333344444555558899998877553
No 245
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=52.45 E-value=1.2e+02 Score=27.58 Aligned_cols=110 Identities=18% Similarity=0.192 Sum_probs=69.1
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEee--c-CCCC-----------------CCCCCCchhHHHHH
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISV--N-YRRS-----------------PEHRCPSQYEDGID 142 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~--d-yr~~-----------------~~~~~~~~~~D~~~ 142 (299)
+.|++|.+-| +.|+..+....-++.++. +.|+.|..+ | ||-+ +...-..+++=+..
T Consensus 98 ~~P~vImmvG---LQGsGKTTt~~KLA~~lk-k~~~kvllVaaD~~RpAA~eQL~~La~q~~v~~f~~~~~~~Pv~Iak~ 173 (451)
T COG0541 98 KPPTVILMVG---LQGSGKTTTAGKLAKYLK-KKGKKVLLVAADTYRPAAIEQLKQLAEQVGVPFFGSGTEKDPVEIAKA 173 (451)
T ss_pred CCCeEEEEEe---ccCCChHhHHHHHHHHHH-HcCCceEEEecccCChHHHHHHHHHHHHcCCceecCCCCCCHHHHHHH
Confidence 4589999998 556665544445556665 577776544 3 6621 22222244555566
Q ss_pred HHHHHHhhcCC-------------------CCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEE
Q 040187 143 ALKFIDSSFID-------------------IQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIA 200 (299)
Q Consensus 143 a~~~l~~~~~~-------------------~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~ 200 (299)
++++..++..+ ....+.-+.|+.+.++=+|+=|.-|...|....+. ..+.|+|+
T Consensus 174 al~~ak~~~~DvvIvDTAGRl~ide~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~----l~itGvIl 246 (451)
T COG0541 174 ALEKAKEEGYDVVIVDTAGRLHIDEELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEA----LGITGVIL 246 (451)
T ss_pred HHHHHHHcCCCEEEEeCCCcccccHHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhh----cCCceEEE
Confidence 77776655220 11112236899999999999999999999887643 35778877
No 246
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=50.68 E-value=24 Score=27.32 Aligned_cols=18 Identities=28% Similarity=0.278 Sum_probs=16.2
Q ss_pred EEEecChhHHHHHHHHHH
Q 040187 167 FLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~~ 184 (299)
.++|-|+|+.+|..++..
T Consensus 31 ~i~GtSaGal~a~~~a~g 48 (175)
T cd07205 31 IVSGTSAGAIVGALYAAG 48 (175)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 799999999999999854
No 247
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=47.96 E-value=28 Score=28.39 Aligned_cols=18 Identities=28% Similarity=0.222 Sum_probs=16.0
Q ss_pred EEEecChhHHHHHHHHHH
Q 040187 167 FLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~~ 184 (299)
.++|.|+|+.+|+.++..
T Consensus 31 ~i~GtSaGAi~aa~~a~g 48 (221)
T cd07210 31 AISGTSAGALVGGLFASG 48 (221)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 699999999999999863
No 248
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=47.01 E-value=42 Score=26.51 Aligned_cols=39 Identities=13% Similarity=0.151 Sum_probs=26.5
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeec
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVN 124 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~d 124 (299)
+..|.+|||-| ..|+..+..-..+.++|. +.|+.+...|
T Consensus 20 ~~~~~viW~TG---LSGsGKSTiA~ale~~L~-~~G~~~y~LD 58 (197)
T COG0529 20 GQKGAVIWFTG---LSGSGKSTIANALEEKLF-AKGYHVYLLD 58 (197)
T ss_pred CCCCeEEEeec---CCCCCHHHHHHHHHHHHH-HcCCeEEEec
Confidence 45689999999 445554433334455554 8899998887
No 249
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=45.51 E-value=31 Score=31.31 Aligned_cols=32 Identities=22% Similarity=0.193 Sum_probs=23.6
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHH
Q 040187 142 DALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 142 ~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~ 184 (299)
.+++.|.++. +.++ +++|.|+|+.+|+.++..
T Consensus 90 GVLkaL~E~g---------l~p~--vIsGTSaGAivAal~as~ 121 (421)
T cd07230 90 GVLKALFEAN---------LLPR--IISGSSAGSIVAAILCTH 121 (421)
T ss_pred HHHHHHHHcC---------CCCC--EEEEECHHHHHHHHHHcC
Confidence 4566666654 3443 699999999999988864
No 250
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=45.23 E-value=32 Score=26.59 Aligned_cols=33 Identities=24% Similarity=0.127 Sum_probs=24.5
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHH
Q 040187 141 IDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 141 ~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~ 184 (299)
..+++.|.++. +. .-.+.|-|+|+.+|..++..
T Consensus 14 ~Gvl~aL~e~g---------i~--~d~v~GtSaGAi~aa~~a~g 46 (172)
T cd07198 14 VGVAKALRERG---------PL--IDIIAGTSAGAIVAALLASG 46 (172)
T ss_pred HHHHHHHHHcC---------CC--CCEEEEECHHHHHHHHHHcC
Confidence 34567776665 22 45789999999999999874
No 251
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=45.09 E-value=37 Score=26.74 Aligned_cols=32 Identities=31% Similarity=0.155 Sum_probs=23.2
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHH
Q 040187 142 DALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 142 ~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~ 184 (299)
.+++.|.++. +.+ =.++|-|+||.+|+.++..
T Consensus 16 Gvl~~L~e~~---------~~~--d~i~GtSaGai~aa~~a~g 47 (194)
T cd07207 16 GALKALEEAG---------ILK--KRVAGTSAGAITAALLALG 47 (194)
T ss_pred HHHHHHHHcC---------CCc--ceEEEECHHHHHHHHHHcC
Confidence 4556665543 233 4789999999999999864
No 252
>PRK06489 hypothetical protein; Provisional
Probab=44.41 E-value=50 Score=29.01 Aligned_cols=42 Identities=17% Similarity=0.154 Sum_probs=31.4
Q ss_pred HHHHHCCCcEEEEEeCCC----ceEEEecCCchHHHHHHHHHHHHHHhhhc
Q 040187 252 EGLKKCGKDAYLIEYPNA----VHCFYLFPEVLECSLFLKEVKDFICSQAA 298 (299)
Q Consensus 252 ~~l~~~g~~~~~~~~~g~----~H~f~~~~~~~~~~~~~~~i~~fl~~~~~ 298 (299)
+.+.+.-.+.+++++|++ +|... ++.+++.+.+.+||+++.+
T Consensus 314 ~~la~~ip~a~l~~i~~a~~~~GH~~~-----e~P~~~~~~i~~FL~~~~~ 359 (360)
T PRK06489 314 EAALKRVKHGRLVLIPASPETRGHGTT-----GSAKFWKAYLAEFLAQVPK 359 (360)
T ss_pred HHHHHhCcCCeEEEECCCCCCCCcccc-----cCHHHHHHHHHHHHHhccc
Confidence 455555556799999996 99653 3578889999999987654
No 253
>PF12122 DUF3582: Protein of unknown function (DUF3582); InterPro: IPR022732 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the N-terminal domain of membrane-bound serine endopeptidases belonging to MEROPS peptidase family S54 (rhomboid-1, clan ST). This domain contains a conserved ASW sequence motif and a single completely conserved residue F that may be functionally important. The tertiary structure of the GlpG protein from Escherichia coli has been determined []. The GlpG protein has six transmembrane domains (other members of the family are predicted to have seven), with the N- and C-terminal ends anchored in the cytoplasm. One transmembrane domain is shorter than the rest, creating an internal, aqueous cavity just below the membrane surface and it is here were proteolysis occurs. There is also a membrane-embedded loop between the first and second transmembrane domains which is postulated to act as a gate controlling substrate access to the active site. No other family of serine peptidases is known to have active site residues within transmembrane domains (although transmembrane active sites are known for aspartic peptidase and metallopeptidases), and the GlpG protein has the type structure for clan ST.; GO: 0004252 serine-type endopeptidase activity, 0016021 integral to membrane; PDB: 3UBB_A 3B45_A 3B44_A 2NRF_A 3TXT_A 2O7L_A 2XTU_A 2IRV_A 2XOW_A 2XTV_A ....
Probab=43.90 E-value=96 Score=21.81 Aligned_cols=47 Identities=11% Similarity=0.146 Sum_probs=29.8
Q ss_pred HHHHHHHHHCCCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHHh
Q 040187 248 NRYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICS 295 (299)
Q Consensus 248 ~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~ 295 (299)
..|.+-|+..|+++++....++....+..+ .+...++..++..|+++
T Consensus 14 qaF~DYl~sqgI~~~i~~~~~~~~~lwl~d-e~~~~~a~~el~~Fl~n 60 (101)
T PF12122_consen 14 QAFIDYLASQGIELQIEPEGQGQFALWLHD-EEHLEQAEQELEEFLQN 60 (101)
T ss_dssp HHHHHHHHHTT--EEEE-SSSE--EEEES--GGGHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCCeEEEEECCCCceEEEEeC-HHHHHHHHHHHHHHHHC
Confidence 378899999999888887544424444432 35677888888888875
No 254
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=43.37 E-value=31 Score=29.28 Aligned_cols=35 Identities=26% Similarity=0.499 Sum_probs=27.1
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCC
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSP 129 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~ 129 (299)
...|.|+|.-|+|+ .+.+++ ..||.|++.|+...|
T Consensus 250 ~~vPmi~fakG~g~------------~Le~l~-~tG~DVvgLDWTvdp 284 (359)
T KOG2872|consen 250 APVPMILFAKGSGG------------ALEELA-QTGYDVVGLDWTVDP 284 (359)
T ss_pred CCCceEEEEcCcch------------HHHHHH-hcCCcEEeecccccH
Confidence 35699999999653 256777 889999999987543
No 255
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=42.05 E-value=30 Score=30.09 Aligned_cols=20 Identities=30% Similarity=0.506 Sum_probs=14.6
Q ss_pred CcEEEEecChhHHHHHHHHH
Q 040187 164 KQCFLAGDSAGGNLAHNVAV 183 (299)
Q Consensus 164 ~~i~l~G~S~GG~lA~~~a~ 183 (299)
+.=.++|-|.|++.++.+-.
T Consensus 303 eeGll~G~SSGan~~aAl~~ 322 (362)
T KOG1252|consen 303 EEGLLVGISSGANVAAALKL 322 (362)
T ss_pred hhCeeecccchHHHHHHHHH
Confidence 34568999999987766543
No 256
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=39.06 E-value=1.7e+02 Score=26.58 Aligned_cols=99 Identities=16% Similarity=0.108 Sum_probs=61.4
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCC----------CCchhHHHHHHHHHHHhhc
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHR----------CPSQYEDGIDALKFIDSSF 151 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~----------~~~~~~D~~~a~~~l~~~~ 151 (299)
..+|+|++--|-+- +... .... ...| .+.+-+++.||...++. ..+...|.+..++.++..
T Consensus 61 ~drPtV~~T~GY~~---~~~p-~r~E-pt~L---ld~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~i- 131 (448)
T PF05576_consen 61 FDRPTVLYTEGYNV---STSP-RRSE-PTQL---LDGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPI- 131 (448)
T ss_pred CCCCeEEEecCccc---ccCc-cccc-hhHh---hccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhh-
Confidence 35799988777332 1111 1122 2333 36677888999654331 124567888888888553
Q ss_pred CCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEecccC
Q 040187 152 IDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPFF 205 (299)
Q Consensus 152 ~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~~ 205 (299)
-+.+-+--|-|=||..|+..=.- .|..+.+.|......
T Consensus 132 ----------Y~~kWISTG~SKGGmTa~y~rrF------yP~DVD~tVaYVAP~ 169 (448)
T PF05576_consen 132 ----------YPGKWISTGGSKGGMTAVYYRRF------YPDDVDGTVAYVAPN 169 (448)
T ss_pred ----------ccCCceecCcCCCceeEEEEeee------CCCCCCeeeeeeccc
Confidence 36788899999999876654332 566788888754443
No 257
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=36.89 E-value=53 Score=28.73 Aligned_cols=42 Identities=17% Similarity=0.227 Sum_probs=28.1
Q ss_pred HHHHHHHHCCCcEEEEEe-CCCceEEEecCCchHHHHHHHHHHHHHH
Q 040187 249 RYYEGLKKCGKDAYLIEY-PNAVHCFYLFPEVLECSLFLKEVKDFIC 294 (299)
Q Consensus 249 ~~~~~l~~~g~~~~~~~~-~g~~H~f~~~~~~~~~~~~~~~i~~fl~ 294 (299)
.+++.+......++++++ ++++|.... ++.+++.+.+.+||+
T Consensus 309 ~~a~~i~~~~~~v~~~~i~~~~GH~~~l----e~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 309 ELAKALPAAGLRVTYVEIESPYGHDAFL----VETDQVEELIRGFLR 351 (351)
T ss_pred HHHHHHhhcCCceEEEEeCCCCCcchhh----cCHHHHHHHHHHHhC
Confidence 556666554444454444 689995544 567888899999974
No 258
>KOG4530 consensus Predicted flavoprotein [General function prediction only]
Probab=36.40 E-value=1.2e+02 Score=23.33 Aligned_cols=61 Identities=13% Similarity=0.170 Sum_probs=40.0
Q ss_pred HHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHH
Q 040187 106 DDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNV 181 (299)
Q Consensus 106 ~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~ 181 (299)
..+-+.++...+++.+.+.|..+ +|+. ...|++|+... ++..|.-|+-.|.=.||-.+..+
T Consensus 78 ~aw~~ki~~aD~ivFvtPqYN~g----ypA~---LKNAlD~lyhe--------W~gKPalivSyGGhGGg~c~~qL 138 (199)
T KOG4530|consen 78 EAWRQKILEADSIVFVTPQYNFG----YPAP---LKNALDWLYHE--------WAGKPALIVSYGGHGGGRCQYQL 138 (199)
T ss_pred HHHHHHHhhcceEEEecccccCC----CchH---HHHHHHHhhhh--------hcCCceEEEEecCCCCchHHHHH
Confidence 45667777677888889988853 4444 45677887654 33566667777775555555544
No 259
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=34.98 E-value=31 Score=29.85 Aligned_cols=17 Identities=41% Similarity=0.616 Sum_probs=15.5
Q ss_pred EEEecChhHHHHHHHHH
Q 040187 167 FLAGDSAGGNLAHNVAV 183 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~ 183 (299)
.++|.|+||.+|+.++.
T Consensus 35 ~i~GTStGgiIA~~la~ 51 (312)
T cd07212 35 WIAGTSTGGILALALLH 51 (312)
T ss_pred EEEeeChHHHHHHHHHc
Confidence 68999999999999885
No 260
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=34.65 E-value=70 Score=27.28 Aligned_cols=50 Identities=18% Similarity=-0.021 Sum_probs=30.4
Q ss_pred CCCCCCcHHHHHHHHHHHHCCCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHHhh
Q 040187 238 EGSNRDHPAANRYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFICSQ 296 (299)
Q Consensus 238 ~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~~~ 296 (299)
+..|...|.. ..+.+.+.-.+.+++++++++|... .++.++.+.+|+++.
T Consensus 256 g~~D~~~p~~--~~~~~~~~~~~~~~~~~~~~gH~~~-------~~~~~~~i~~~~~~~ 305 (306)
T TIGR01249 256 GRYDLCCPLQ--SAWALHKAFPEAELKVTNNAGHSAF-------DPNNLAALVHALETY 305 (306)
T ss_pred cCCCCCCCHH--HHHHHHHhCCCCEEEEECCCCCCCC-------ChHHHHHHHHHHHHh
Confidence 3444444443 2555655555688999999999642 234556666666553
No 261
>PRK13703 conjugal pilus assembly protein TraF; Provisional
Probab=34.51 E-value=1.1e+02 Score=25.54 Aligned_cols=55 Identities=15% Similarity=0.074 Sum_probs=35.0
Q ss_pred cEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHH
Q 040187 85 PVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDA 143 (299)
Q Consensus 85 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a 143 (299)
-.++||+.|. +..-..+.+.++.++.+.|+.|+.+..-+.+...||....|.-.+
T Consensus 145 ~GL~fFy~s~----Cp~C~~~aPil~~fa~~yg~~v~~VS~DG~~~p~fp~~~~d~gqa 199 (248)
T PRK13703 145 YGLMFFYRGQ----DPIDGQLAQVINDFRDTYGLSVIPVSVDGVINPLLPDSRTDQGQA 199 (248)
T ss_pred ceEEEEECCC----CchhHHHHHHHHHHHHHhCCeEEEEecCCCCCCCCCCCccChhHH
Confidence 4566666643 232333567889999999999977776665544566555454443
No 262
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=33.90 E-value=37 Score=26.37 Aligned_cols=19 Identities=26% Similarity=0.197 Sum_probs=16.6
Q ss_pred EEEEecChhHHHHHHHHHH
Q 040187 166 CFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 166 i~l~G~S~GG~lA~~~a~~ 184 (299)
=.++|.|+|+.+|..++..
T Consensus 30 d~i~GtSaGAi~aa~~a~g 48 (175)
T cd07228 30 DIIAGSSIGALVGALYAAG 48 (175)
T ss_pred eEEEEeCHHHHHHHHHHcC
Confidence 4789999999999988864
No 263
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=33.47 E-value=62 Score=26.91 Aligned_cols=17 Identities=29% Similarity=0.268 Sum_probs=15.5
Q ss_pred EEecChhHHHHHHHHHH
Q 040187 168 LAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 168 l~G~S~GG~lA~~~a~~ 184 (299)
++|-|+|+..|..++..
T Consensus 34 i~GtSAGAl~aa~~a~g 50 (245)
T cd07218 34 ISGASAGALAACCLLCD 50 (245)
T ss_pred EEEEcHHHHHHHHHHhC
Confidence 99999999999998864
No 264
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=33.37 E-value=61 Score=26.86 Aligned_cols=19 Identities=37% Similarity=0.247 Sum_probs=16.6
Q ss_pred EEEEecChhHHHHHHHHHH
Q 040187 166 CFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 166 i~l~G~S~GG~lA~~~a~~ 184 (299)
-.++|-|+|+.+|..++..
T Consensus 33 ~~i~GtSAGAl~aa~~a~g 51 (243)
T cd07204 33 RRIAGASAGAIVAAVVLCG 51 (243)
T ss_pred CEEEEEcHHHHHHHHHHhC
Confidence 3799999999999998864
No 265
>PRK10279 hypothetical protein; Provisional
Probab=32.62 E-value=61 Score=27.89 Aligned_cols=31 Identities=19% Similarity=0.194 Sum_probs=23.1
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHH
Q 040187 142 DALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAV 183 (299)
Q Consensus 142 ~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~ 183 (299)
-+++.|.++. +.+ -.++|.|+|+.++..+|.
T Consensus 22 GVL~aL~E~g---------i~~--d~i~GtS~GAlvga~yA~ 52 (300)
T PRK10279 22 GVINALKKVG---------IEI--DIVAGCSIGSLVGAAYAC 52 (300)
T ss_pred HHHHHHHHcC---------CCc--CEEEEEcHHHHHHHHHHc
Confidence 4567776654 333 478999999999998884
No 266
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=32.06 E-value=96 Score=22.52 Aligned_cols=14 Identities=14% Similarity=0.489 Sum_probs=10.4
Q ss_pred CccEEEEEcCCccc
Q 040187 83 NLPVIVYFHGGGFA 96 (299)
Q Consensus 83 ~~p~vv~~HGGg~~ 96 (299)
+.-++|++||.-|-
T Consensus 55 ~~klaIfVDGcfWH 68 (117)
T TIGR00632 55 EYRCVIFIHGCFWH 68 (117)
T ss_pred CCCEEEEEcccccc
Confidence 35689999997554
No 267
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=31.79 E-value=74 Score=26.95 Aligned_cols=19 Identities=32% Similarity=0.190 Sum_probs=15.8
Q ss_pred EEEEecChhHHHHHHHHHH
Q 040187 166 CFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 166 i~l~G~S~GG~lA~~~a~~ 184 (299)
-+++|||.|-..|+.++..
T Consensus 84 ~~~~GhSlGE~aA~~~ag~ 102 (298)
T smart00827 84 DAVVGHSLGEIAAAYVAGV 102 (298)
T ss_pred cEEEecCHHHHHHHHHhCC
Confidence 4899999999998887643
No 268
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=30.84 E-value=79 Score=27.19 Aligned_cols=18 Identities=28% Similarity=0.386 Sum_probs=16.0
Q ss_pred EEEecChhHHHHHHHHHH
Q 040187 167 FLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~~ 184 (299)
.+.|.|+|+.+|+.++..
T Consensus 100 ~i~GtSaGAi~aa~~~~~ 117 (298)
T cd07206 100 VISGSSAGAIVAALLGTH 117 (298)
T ss_pred EEEEEcHHHHHHHHHHcC
Confidence 599999999999999864
No 269
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=30.84 E-value=72 Score=28.61 Aligned_cols=33 Identities=18% Similarity=0.147 Sum_probs=24.2
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHH
Q 040187 141 IDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 141 ~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~ 184 (299)
..+++.|.+.. +-++ ++.|.|+|+.+|..+|.+
T Consensus 99 ~Gv~kaL~e~g---------l~p~--~i~GtS~Gaivaa~~a~~ 131 (391)
T cd07229 99 LGVVKALWLRG---------LLPR--IITGTATGALIAALVGVH 131 (391)
T ss_pred HHHHHHHHHcC---------CCCc--eEEEecHHHHHHHHHHcC
Confidence 34566666654 3444 499999999999999985
No 270
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=30.57 E-value=43 Score=25.75 Aligned_cols=19 Identities=32% Similarity=0.235 Sum_probs=16.3
Q ss_pred EEEEecChhHHHHHHHHHH
Q 040187 166 CFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 166 i~l~G~S~GG~lA~~~a~~ 184 (299)
-.+.|-|+||.+|+.++..
T Consensus 29 d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 29 DVISGTSAGALNAALLALG 47 (204)
T ss_dssp SEEEEECCHHHHHHHHHTC
T ss_pred cEEEEcChhhhhHHHHHhC
Confidence 4699999999999888765
No 271
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=30.56 E-value=66 Score=26.70 Aligned_cols=33 Identities=27% Similarity=0.196 Sum_probs=23.0
Q ss_pred HHHHHHHhhcCCCCCCCCCCC-CCcE-EEEecChhHHHHHHHHH
Q 040187 142 DALKFIDSSFIDIQNFPACAD-IKQC-FLAGDSAGGNLAHNVAV 183 (299)
Q Consensus 142 ~a~~~l~~~~~~~~~~~~~~d-~~~i-~l~G~S~GG~lA~~~a~ 183 (299)
.+++.|.++.. . .+++ .++|-|+|+..|..++.
T Consensus 16 GVl~~L~e~g~---------~l~~~~~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 16 GAAKALLRHGK---------KLLKRVKRFAGASAGSLVAAVLLT 50 (246)
T ss_pred HHHHHHHHcCc---------hhhccCCEEEEECHHHHHHHHHhc
Confidence 45667766652 2 1222 79999999999999973
No 272
>COG4075 Uncharacterized conserved protein, homolog of nitrogen regulatory protein PII [Function unknown]
Probab=30.07 E-value=1.2e+02 Score=21.11 Aligned_cols=62 Identities=19% Similarity=0.210 Sum_probs=38.0
Q ss_pred HHHHHHHhhCCcE-EEeecCCCCCCCCCC--chhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHH
Q 040187 107 DACRRLAVEVPAV-VISVNYRRSPEHRCP--SQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNV 181 (299)
Q Consensus 107 ~~~~~la~~~g~~-v~~~dyr~~~~~~~~--~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~ 181 (299)
..++.++ +.|++ .+..+||+-....|. ..-+|...|++.+.+.. ++-+++|.=.--..+..+
T Consensus 18 kaiN~ma-d~GiTGFfl~eYrGvsPd~wkgf~~~EDpE~aik~i~D~s------------~~AVlI~tVV~Ee~veki 82 (110)
T COG4075 18 KAINIMA-DAGITGFFLHEYRGVSPDKWKGFSKEEDPESAIKAIRDLS------------DKAVLIGTVVKEEKVEKI 82 (110)
T ss_pred HHHHHHH-hcCcceEEEEEecCcChhHhcCcccccCHHHHHHHHHHhh------------hceEEEEEecCHHHHHHH
Confidence 3456666 66876 678999974322222 12288899999888764 456677655444444433
No 273
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=29.99 E-value=41 Score=28.93 Aligned_cols=17 Identities=29% Similarity=0.522 Sum_probs=15.3
Q ss_pred EEEecChhHHHHHHHHH
Q 040187 167 FLAGDSAGGNLAHNVAV 183 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~ 183 (299)
.++|.|.||.+|+.++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 58999999999999975
No 274
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=29.90 E-value=1.4e+02 Score=21.61 Aligned_cols=32 Identities=16% Similarity=0.323 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHH
Q 040187 137 YEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLA 178 (299)
Q Consensus 137 ~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA 178 (299)
..++..+++|..... ..+.|+|+|||--|.+.
T Consensus 42 ~~~~~~sl~~av~~l----------~v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 42 DLDVLASLEYAVEVL----------GVKHIIVCGHTDCGAVK 73 (119)
T ss_pred cccHHHHHHHHHHhh----------CCCEEEEEccCCCcHHH
Confidence 347888888887765 46899999997755444
No 275
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=29.83 E-value=86 Score=23.80 Aligned_cols=19 Identities=32% Similarity=0.405 Sum_probs=16.1
Q ss_pred CcEEEEecChhHHHHHHHH
Q 040187 164 KQCFLAGDSAGGNLAHNVA 182 (299)
Q Consensus 164 ~~i~l~G~S~GG~lA~~~a 182 (299)
.--.+.|-|+|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 3457899999999999887
No 276
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=29.49 E-value=59 Score=29.08 Aligned_cols=22 Identities=27% Similarity=0.342 Sum_probs=17.2
Q ss_pred CCcEEEEecChhHHHHHHHHHH
Q 040187 163 IKQCFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 163 ~~~i~l~G~S~GG~lA~~~a~~ 184 (299)
.++|-++|||.||-.+.....+
T Consensus 149 i~kISfvghSLGGLvar~AIgy 170 (405)
T KOG4372|consen 149 IEKISFVGHSLGGLVARYAIGY 170 (405)
T ss_pred cceeeeeeeecCCeeeeEEEEe
Confidence 4799999999999776655443
No 277
>COG1830 FbaB DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes [Carbohydrate transport and metabolism]
Probab=29.06 E-value=3e+02 Score=23.23 Aligned_cols=70 Identities=20% Similarity=0.283 Sum_probs=46.1
Q ss_pred CccEEEEEcCCcccccc--CCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCC
Q 040187 83 NLPVIVYFHGGGFAILA--ANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPAC 160 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~--~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~ 160 (299)
..|+|+|+.+-|....+ ......-.++.+++.+.|..++=.+|..++ +.++-+.+-.
T Consensus 143 Gmp~v~~~YpRg~~~~~~~~~d~~~v~~aaRlaaelGADIiK~~ytg~~------------e~F~~vv~~~--------- 201 (265)
T COG1830 143 GMPLVAWAYPRGPAIKDEYHRDADLVGYAARLAAELGADIIKTKYTGDP------------ESFRRVVAAC--------- 201 (265)
T ss_pred CCceEEEEeccCCcccccccccHHHHHHHHHHHHHhcCCeEeecCCCCh------------HHHHHHHHhC---------
Confidence 56899988886654433 222223456788888999999999998765 3344444433
Q ss_pred CCCCcEEEEecChhH
Q 040187 161 ADIKQCFLAGDSAGG 175 (299)
Q Consensus 161 ~d~~~i~l~G~S~GG 175 (299)
+-.|++.|.+-++
T Consensus 202 --~vpVviaGG~k~~ 214 (265)
T COG1830 202 --GVPVVIAGGPKTE 214 (265)
T ss_pred --CCCEEEeCCCCCC
Confidence 3668888877763
No 278
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=29.01 E-value=46 Score=28.36 Aligned_cols=18 Identities=39% Similarity=0.499 Sum_probs=16.1
Q ss_pred EEEecChhHHHHHHHHHH
Q 040187 167 FLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~~ 184 (299)
.++|.|+||.+|+.++..
T Consensus 37 ~i~GTSaGaiia~~la~g 54 (288)
T cd07213 37 LFAGTSAGSLIALGLALG 54 (288)
T ss_pred EEEEeCHHHHHHHHHHcC
Confidence 689999999999999854
No 279
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=28.03 E-value=1.8e+02 Score=24.02 Aligned_cols=18 Identities=33% Similarity=0.204 Sum_probs=13.9
Q ss_pred EEEEecChhHHHHHHHHH
Q 040187 166 CFLAGDSAGGNLAHNVAV 183 (299)
Q Consensus 166 i~l~G~S~GG~lA~~~a~ 183 (299)
..++|.|||+.++.....
T Consensus 114 ~~~~G~SAGAii~~~~i~ 131 (233)
T PRK05282 114 TPYIGWSAGANVAGPTIR 131 (233)
T ss_pred CEEEEECHHHHhhhccce
Confidence 789999999987554433
No 280
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=27.71 E-value=83 Score=27.16 Aligned_cols=33 Identities=18% Similarity=0.203 Sum_probs=23.8
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHH
Q 040187 141 IDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 141 ~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~ 184 (299)
..+++.|.++. +.+ =.++|.|+|+.++..++..
T Consensus 31 iGvL~aLee~g---------i~~--d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 31 IGVIKALEEAG---------IPV--DMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHHHHHcC---------CCC--CEEEEECHHHHHHHHHHcC
Confidence 34566776664 333 3689999999999998864
No 281
>TIGR02739 TraF type-F conjugative transfer system pilin assembly protein TraF. This protein is part of a large group of proteins involved in conjugative transfer of plasmid DNA, specifically the F-type system. This protein has been predicted to contain a thioredoxin fold and has been shown to be localized to the periplasm. Unlike the related protein TrbB (TIGR02738), TraF does not contain a conserved pair of cysteines and has been shown not to function as a thiol disulfide isomerase by complementation of an Ecoli DsbA defect. The protein is believed to be involved in pilin assembly. Even more closely related than TrbB is a clade of genes (TIGR02740) which do contain the CXXC motif, but it is unclear whether these genes are involved in type-F conjugation systems per se.
Probab=27.67 E-value=1.7e+02 Score=24.55 Aligned_cols=55 Identities=18% Similarity=0.155 Sum_probs=34.6
Q ss_pred cEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHH
Q 040187 85 PVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDA 143 (299)
Q Consensus 85 p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a 143 (299)
-.++||..|. +..-..+...++.++.+.|+.|+.++.-+.+-..+|....|.-.+
T Consensus 152 ~gL~fFy~~~----C~~C~~~apil~~fa~~ygi~v~~VS~DG~~~p~fp~~~~d~gqa 206 (256)
T TIGR02739 152 YGLFFFYRGK----SPISQKMAPVIQAFAKEYGISVIPISVDGTLIPGLPNSRSDSGQA 206 (256)
T ss_pred eeEEEEECCC----CchhHHHHHHHHHHHHHhCCeEEEEecCCCCCCCCCCccCChHHH
Confidence 3455555543 222233567788899999999988887766545566555554433
No 282
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=27.62 E-value=98 Score=26.91 Aligned_cols=18 Identities=28% Similarity=0.388 Sum_probs=15.9
Q ss_pred EEEecChhHHHHHHHHHH
Q 040187 167 FLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~~ 184 (299)
++.|.|+|+.+|+.++..
T Consensus 99 ~i~GsSaGAivaa~~~~~ 116 (323)
T cd07231 99 VIAGSSVGSIVCAIIATR 116 (323)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 599999999999998864
No 283
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.46 E-value=49 Score=29.09 Aligned_cols=17 Identities=35% Similarity=0.644 Sum_probs=15.6
Q ss_pred EEEecChhHHHHHHHHH
Q 040187 167 FLAGDSAGGNLAHNVAV 183 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~ 183 (299)
.++|.|.||.+|+.++.
T Consensus 44 lIaGTStGgIIAa~la~ 60 (344)
T cd07217 44 FVGGTSTGSIIAACIAL 60 (344)
T ss_pred EEEEecHHHHHHHHHHc
Confidence 68999999999999986
No 284
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=27.09 E-value=94 Score=26.92 Aligned_cols=43 Identities=23% Similarity=0.213 Sum_probs=29.4
Q ss_pred CCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHH
Q 040187 132 RCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAV 183 (299)
Q Consensus 132 ~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~ 183 (299)
..|..+--...+++-+.+.. ......++.|||.|=+.|+.++.
T Consensus 62 tQPal~~~s~a~~~~l~~~~---------~~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 62 TQPALLLVSLAAYRVLAEQG---------LGVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred hhHHHHHHHHHHHHHHHHhc---------CCCCCceeecccHhHHHHHHHcc
Confidence 34455555555666666543 14566799999999999988875
No 285
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=27.00 E-value=52 Score=26.60 Aligned_cols=19 Identities=21% Similarity=0.149 Sum_probs=16.7
Q ss_pred EEEecChhHHHHHHHHHHh
Q 040187 167 FLAGDSAGGNLAHNVAVLA 185 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~~~ 185 (299)
.+.|.|+|+.+|+.++...
T Consensus 29 ~i~GtS~GAl~aa~~a~~~ 47 (215)
T cd07209 29 IISGTSIGAINGALIAGGD 47 (215)
T ss_pred EEEEECHHHHHHHHHHcCC
Confidence 7899999999999998753
No 286
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=26.41 E-value=43 Score=28.83 Aligned_cols=17 Identities=29% Similarity=0.511 Sum_probs=15.3
Q ss_pred EEEecChhHHHHHHHHH
Q 040187 167 FLAGDSAGGNLAHNVAV 183 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~ 183 (299)
.++|.|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 68999999999999874
No 287
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=26.10 E-value=58 Score=27.26 Aligned_cols=34 Identities=21% Similarity=0.001 Sum_probs=23.7
Q ss_pred HHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHh
Q 040187 142 DALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLA 185 (299)
Q Consensus 142 ~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~ 185 (299)
.+++.+.++.. . .-=.++|-|+|+.+|+.++...
T Consensus 15 Gvl~al~e~~~---------~-~fd~i~GtSaGAi~a~~~~~g~ 48 (266)
T cd07208 15 GVLDAFLEAGI---------R-PFDLVIGVSAGALNAASYLSGQ 48 (266)
T ss_pred HHHHHHHHcCC---------C-CCCEEEEECHHHHhHHHHHhCC
Confidence 45666666542 2 1236899999999999988653
No 288
>cd07214 Pat17_isozyme_like Patatin-like phospholipase of plants. Pat17 is an isozyme of patatin cloned from Solanum cardiophyllum. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue, and Nu = nucleophile). Patatin-like phospholipase are included in this group. Members of this family have also been found in vertebrates.
Probab=25.97 E-value=49 Score=29.13 Aligned_cols=17 Identities=29% Similarity=0.546 Sum_probs=15.6
Q ss_pred EEEecChhHHHHHHHHH
Q 040187 167 FLAGDSAGGNLAHNVAV 183 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~ 183 (299)
.++|.|.||.+|+.++.
T Consensus 46 liaGTStGgiiA~~la~ 62 (349)
T cd07214 46 VIAGTSTGGLITAMLTA 62 (349)
T ss_pred EEeeCCHHHHHHHHHhc
Confidence 58999999999999986
No 289
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A ....
Probab=25.78 E-value=90 Score=22.04 Aligned_cols=32 Identities=19% Similarity=0.203 Sum_probs=22.6
Q ss_pred EEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecC
Q 040187 87 IVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNY 125 (299)
Q Consensus 87 vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dy 125 (299)
+|++.|-. |+. =..+++.|+.+.|+.++..|-
T Consensus 1 vI~I~G~~---gsG----KST~a~~La~~~~~~~i~~d~ 32 (121)
T PF13207_consen 1 VIIISGPP---GSG----KSTLAKELAERLGFPVISMDD 32 (121)
T ss_dssp EEEEEEST---TSS----HHHHHHHHHHHHTCEEEEEHH
T ss_pred CEEEECCC---CCC----HHHHHHHHHHHHCCeEEEecc
Confidence 46677721 232 267889998777999998886
No 290
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=25.71 E-value=39 Score=28.27 Aligned_cols=15 Identities=33% Similarity=0.512 Sum_probs=13.2
Q ss_pred CCCcEEEEecChhHH
Q 040187 162 DIKQCFLAGDSAGGN 176 (299)
Q Consensus 162 d~~~i~l~G~S~GG~ 176 (299)
+.+.|+++|||.|..
T Consensus 233 ~i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEV 247 (270)
T ss_pred CCCEEEEEeCCCchh
Confidence 668999999999974
No 291
>cd03015 PRX_Typ2cys Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric
Probab=25.47 E-value=97 Score=23.87 Aligned_cols=41 Identities=17% Similarity=0.318 Sum_probs=25.6
Q ss_pred CccEEEEEcCCccccccC-CCchhHHHHHHHHhhCCcEEEeec
Q 040187 83 NLPVIVYFHGGGFAILAA-NSKVYDDACRRLAVEVPAVVISVN 124 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~-~~~~~~~~~~~la~~~g~~v~~~d 124 (299)
..++||+|+.++|+-.+. ....+......+. +.|+.|+++.
T Consensus 29 Gk~vvl~F~~~~~c~~C~~~l~~l~~~~~~~~-~~~v~vv~Is 70 (173)
T cd03015 29 GKWVVLFFYPLDFTFVCPTEIIAFSDRYEEFK-KLNAEVLGVS 70 (173)
T ss_pred CCEEEEEEECCCCCCcCHHHHHHHHHHHHHHH-HCCCEEEEEe
Confidence 358999999777764333 2222333455554 5688888874
No 292
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=25.42 E-value=55 Score=27.28 Aligned_cols=18 Identities=39% Similarity=0.599 Sum_probs=16.2
Q ss_pred EEEecChhHHHHHHHHHH
Q 040187 167 FLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~~ 184 (299)
.++|.|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 589999999999999875
No 293
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=25.27 E-value=77 Score=27.58 Aligned_cols=41 Identities=17% Similarity=0.037 Sum_probs=29.9
Q ss_pred HHHHH-CCCcEEEEEeCC-CceEEEecCCchHHHHHHHHHHHHHHhh
Q 040187 252 EGLKK-CGKDAYLIEYPN-AVHCFYLFPEVLECSLFLKEVKDFICSQ 296 (299)
Q Consensus 252 ~~l~~-~g~~~~~~~~~g-~~H~f~~~~~~~~~~~~~~~i~~fl~~~ 296 (299)
+.+.+ ...+.++.++++ ++|.... ++.+++.+.+.+||++.
T Consensus 297 ~~~~~~i~p~a~l~~i~~~aGH~~~l----E~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 297 VELAEGLGPRGSLRVLRSPYGHDAFL----KETDRIDAILTTALRST 339 (343)
T ss_pred HHHHHHcCCCCeEEEEeCCccHHHHh----cCHHHHHHHHHHHHHhc
Confidence 34433 334688999985 9996554 56788999999999865
No 294
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=25.19 E-value=61 Score=26.91 Aligned_cols=26 Identities=27% Similarity=0.382 Sum_probs=19.8
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecCh
Q 040187 140 GIDALKFIDSSFIDIQNFPACADIKQCFLAGDSA 173 (299)
Q Consensus 140 ~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~ 173 (299)
=..|++||.+.. +++.++++++|+|.
T Consensus 166 K~~Al~~L~~~~--------~~~~~~vl~aGDSg 191 (247)
T PF05116_consen 166 KGAALRYLMERW--------GIPPEQVLVAGDSG 191 (247)
T ss_dssp HHHHHHHHHHHH--------T--GGGEEEEESSG
T ss_pred HHHHHHHHHHHh--------CCCHHHEEEEeCCC
Confidence 357899998866 37889999999995
No 295
>COG5247 BUR6 Class 2 transcription repressor NC2, alpha subunit (DRAP1 homolog) [Transcription]
Probab=25.16 E-value=34 Score=23.80 Aligned_cols=26 Identities=27% Similarity=0.235 Sum_probs=19.7
Q ss_pred CCCCCCCCCCCchhHHHHhhhhhhhh
Q 040187 1 MSTNSKTSPNLPWKAWLSISTLSFAM 26 (299)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~l~~~~ 26 (299)
|.|+++.++...||.|.-+.-+.-++
T Consensus 8 ~~t~~k~n~~~~~ktrFP~ar~KkIM 33 (113)
T COG5247 8 MGTMPKQNSQKKKKTRFPIARLKKIM 33 (113)
T ss_pred CCCCCCCchhhhhhhcCCHHHHHHHH
Confidence 78889999999888887666555443
No 296
>TIGR02806 clostrip clostripain. Clostripain is a cysteine protease characterized from Clostridium histolyticum, and also known from Clostridium perfringens. It is a heterodimer processed from a single precursor polypeptide, specific for Arg-|-Xaa peptide bonds. The older term alpha-clostripain refers to the most active, most reduced form, rather than to the product of one of several different genes. Clostripain belongs to the peptidase family C11, or clostripain family (see pfam03415).
Probab=25.02 E-value=47 Score=30.26 Aligned_cols=15 Identities=33% Similarity=0.525 Sum_probs=13.3
Q ss_pred CCccEEEEEcCCccc
Q 040187 82 TNLPVIVYFHGGGFA 96 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~ 96 (299)
.+.-+|++.||+||.
T Consensus 113 d~Y~LIiwnHG~GW~ 127 (476)
T TIGR02806 113 DKYMLIMANHGGGAK 127 (476)
T ss_pred cceeEEEEeCCCCCc
Confidence 567899999999997
No 297
>PF13728 TraF: F plasmid transfer operon protein
Probab=24.32 E-value=2.2e+02 Score=23.11 Aligned_cols=53 Identities=13% Similarity=0.191 Sum_probs=34.5
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHH
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDG 140 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~ 140 (299)
+...++|+-|. +..-..+...++.++.+.|+.|+.++.-+.+-..+|....|-
T Consensus 121 ~~gL~~F~~~~-----C~~C~~~~pil~~~~~~yg~~v~~vs~DG~~~~~fp~~~~~~ 173 (215)
T PF13728_consen 121 KYGLFFFYRSD-----CPYCQQQAPILQQFADKYGFSVIPVSLDGRPIPSFPNPRPDP 173 (215)
T ss_pred CeEEEEEEcCC-----CchhHHHHHHHHHHHHHhCCEEEEEecCCCCCcCCCCCCCCH
Confidence 44555555552 222333567889999999999988887766555666555433
No 298
>cd01520 RHOD_YbbB Member of the Rhodanese Homology Domain superfamily. This CD includes several putative ATP /GTP binding proteins including E. coli YbbB.
Probab=23.53 E-value=1.7e+02 Score=21.12 Aligned_cols=33 Identities=15% Similarity=0.235 Sum_probs=18.2
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEee
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISV 123 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~ 123 (299)
...++|||+..||. . ...+..+....|+.|..+
T Consensus 85 ~~~~vvvyC~~~G~----r-----s~~a~~~L~~~G~~v~~L 117 (128)
T cd01520 85 RDPKLLIYCARGGM----R-----SQSLAWLLESLGIDVPLL 117 (128)
T ss_pred CCCeEEEEeCCCCc----c-----HHHHHHHHHHcCCceeEe
Confidence 45689999963222 1 112223445679976544
No 299
>PLN02840 tRNA dimethylallyltransferase
Probab=23.52 E-value=5.5e+02 Score=23.43 Aligned_cols=36 Identities=17% Similarity=0.138 Sum_probs=23.8
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecC
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNY 125 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dy 125 (299)
+.+.++.|-|.. |+. -..++..|+.+.+..+++.|-
T Consensus 19 ~~~~vi~I~Gpt---gsG----KTtla~~La~~~~~~iis~Ds 54 (421)
T PLN02840 19 KKEKVIVISGPT---GAG----KSRLALELAKRLNGEIISADS 54 (421)
T ss_pred cCCeEEEEECCC---CCC----HHHHHHHHHHHCCCCeEeccc
Confidence 344566677621 232 256788888888888898883
No 300
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=23.51 E-value=69 Score=27.09 Aligned_cols=18 Identities=22% Similarity=0.137 Sum_probs=16.0
Q ss_pred EEEecChhHHHHHHHHHH
Q 040187 167 FLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~~ 184 (299)
.+.|.|+|+.++..+|..
T Consensus 41 ~v~GtSaGAiiga~ya~g 58 (269)
T cd07227 41 AIGGTSIGSFVGGLYARE 58 (269)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 689999999999998864
No 301
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=23.49 E-value=66 Score=29.08 Aligned_cols=18 Identities=22% Similarity=0.331 Sum_probs=16.1
Q ss_pred EEEecChhHHHHHHHHHH
Q 040187 167 FLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~~ 184 (299)
+++|.|+|+.+|+.++..
T Consensus 98 iI~GtSAGAivaalla~~ 115 (407)
T cd07232 98 VISGTSGGSLVAALLCTR 115 (407)
T ss_pred EEEEECHHHHHHHHHHcC
Confidence 499999999999999874
No 302
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=23.47 E-value=73 Score=24.12 Aligned_cols=12 Identities=33% Similarity=0.529 Sum_probs=10.7
Q ss_pred EEEEecChhHHH
Q 040187 166 CFLAGDSAGGNL 177 (299)
Q Consensus 166 i~l~G~S~GG~l 177 (299)
.+++|.|||+.+
T Consensus 70 ~vi~G~SAGA~i 81 (154)
T PF03575_consen 70 GVIIGTSAGAMI 81 (154)
T ss_dssp SEEEEETHHHHC
T ss_pred CEEEEEChHHhh
Confidence 789999999976
No 303
>cd03013 PRX5_like Peroxiredoxin (PRX) family, PRX5-like subfamily; members are similar to the human protein, PRX5, a homodimeric TRX peroxidase, widely expressed in tissues and found cellularly in mitochondria, peroxisomes and the cytosol. The cellular location of PRX5 suggests that it may have an important antioxidant role in organelles that are major sources of reactive oxygen species (ROS), as well as a role in the control of signal transduction. PRX5 has been shown to reduce hydrogen peroxide, alkyl hydroperoxides and peroxynitrite. As with all other PRXs, the N-terminal peroxidatic cysteine of PRX5 is oxidized into a sulfenic acid intermediate upon reaction with peroxides. Human PRX5 is able to resolve this intermediate by forming an intramolecular disulfide bond with its C-terminal cysteine (the resolving cysteine), which can then be reduced by TRX, just like an atypical 2-cys PRX. This resolving cysteine, however, is not conserved in other members of the subfamily. In such cases
Probab=23.03 E-value=1.8e+02 Score=22.03 Aligned_cols=39 Identities=21% Similarity=0.238 Sum_probs=25.9
Q ss_pred ccEEEEEcCCccccccC-C-CchhHHHHHHHHhhCCc-EEEee
Q 040187 84 LPVIVYFHGGGFAILAA-N-SKVYDDACRRLAVEVPA-VVISV 123 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~-~-~~~~~~~~~~la~~~g~-~v~~~ 123 (299)
.++||+++-+.|.-+.. . ...+......+. +.|+ .|+.+
T Consensus 30 k~vvl~fyP~~~tp~Ct~e~~~~~~~~~~~f~-~~g~~~V~~i 71 (155)
T cd03013 30 KKVVIFGVPGAFTPTCSAQHLPGYVENADELK-AKGVDEVICV 71 (155)
T ss_pred CcEEEEEeCCCCCCCCchhHHHHHHHhHHHHH-HCCCCEEEEE
Confidence 48999999988875543 3 334445566665 6788 47765
No 304
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=22.46 E-value=2.8e+02 Score=19.30 Aligned_cols=54 Identities=17% Similarity=0.092 Sum_probs=32.2
Q ss_pred cCCCCCCCCcHHHHHHHHHHHHCCCcEEEEEeCCCceEEEecCCchHHHHHHHHHHHHHH
Q 040187 235 FLPEGSNRDHPAANRYYEGLKKCGKDAYLIEYPNAVHCFYLFPEVLECSLFLKEVKDFIC 294 (299)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~i~~fl~ 294 (299)
++....|...|... ++++.+.=...+++..+|.+|+.... .... +.+.+.+||.
T Consensus 39 ~l~~~~Dp~TP~~~--a~~~~~~l~~s~lvt~~g~gHg~~~~-~s~C---~~~~v~~yl~ 92 (103)
T PF08386_consen 39 VLGGTHDPVTPYEG--ARAMAARLPGSRLVTVDGAGHGVYAG-GSPC---VDKAVDDYLL 92 (103)
T ss_pred EEecCcCCCCcHHH--HHHHHHHCCCceEEEEeccCcceecC-CChH---HHHHHHHHHH
Confidence 44445555566543 55555443447999999999998752 2223 3444556665
No 305
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=22.36 E-value=90 Score=26.93 Aligned_cols=20 Identities=30% Similarity=0.122 Sum_probs=15.9
Q ss_pred CcEEEEecChhHHHHHHHHH
Q 040187 164 KQCFLAGDSAGGNLAHNVAV 183 (299)
Q Consensus 164 ~~i~l~G~S~GG~lA~~~a~ 183 (299)
..-+++|||+|=..|+.++.
T Consensus 84 ~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 84 KPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp CESEEEESTTHHHHHHHHTT
T ss_pred ccceeeccchhhHHHHHHCC
Confidence 44578999999998887764
No 306
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=22.24 E-value=4.4e+02 Score=21.59 Aligned_cols=56 Identities=11% Similarity=0.032 Sum_probs=33.0
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCc-EEEeecCCCCCCCCCCchhHHHHHHHHHHHhhc
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPA-VVISVNYRRSPEHRCPSQYEDGIDALKFIDSSF 151 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~-~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~ 151 (299)
+..-+|+..||.- ......-.-+..+..+.|| .|+...--+.| ++...+++++++.
T Consensus 136 k~e~~vlmgHGt~-----h~s~~~YacLd~~~~~~~f~~v~v~~ve~yP---------~~d~vi~~l~~~~ 192 (265)
T COG4822 136 KDEILVLMGHGTD-----HHSNAAYACLDHVLDEYGFDNVFVAAVEGYP---------LVDTVIEYLRKNG 192 (265)
T ss_pred cCeEEEEEecCCC-----ccHHHHHHHHHHHHHhcCCCceEEEEecCCC---------cHHHHHHHHHHcC
Confidence 3457899999932 2221122335566668888 45544333322 4567788998876
No 307
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=22.12 E-value=1.2e+02 Score=25.31 Aligned_cols=19 Identities=26% Similarity=0.144 Sum_probs=15.9
Q ss_pred EEEEecChhHHHHHHHHHH
Q 040187 166 CFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 166 i~l~G~S~GG~lA~~~a~~ 184 (299)
-.++|-|+|+..|..++..
T Consensus 38 ~~i~G~SAGAl~aa~~a~g 56 (249)
T cd07220 38 RKIYGASAGALTATALVTG 56 (249)
T ss_pred CeEEEEcHHHHHHHHHHcC
Confidence 4578999999999988764
No 308
>cd07215 Pat17_PNPLA8_PNPLA9_like2 Patatin-like phospholipase of bacteria. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=22.02 E-value=66 Score=28.02 Aligned_cols=16 Identities=38% Similarity=0.501 Sum_probs=14.2
Q ss_pred EEEecChhHHHHHHHH
Q 040187 167 FLAGDSAGGNLAHNVA 182 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a 182 (299)
.++|.|.||.+|+.++
T Consensus 43 li~GTStGgiia~~l~ 58 (329)
T cd07215 43 LVAGTSTGGILTCLYL 58 (329)
T ss_pred eeeccCHHHHHHHHHh
Confidence 6899999999998875
No 309
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=21.97 E-value=44 Score=28.71 Aligned_cols=20 Identities=30% Similarity=0.416 Sum_probs=15.6
Q ss_pred CCCCCCcEEEEecChhHHHH
Q 040187 159 ACADIKQCFLAGDSAGGNLA 178 (299)
Q Consensus 159 ~~~d~~~i~l~G~S~GG~lA 178 (299)
.+-.+.-|+++|+|+|++.-
T Consensus 7 ~~s~~~g~i~~gds~~ahf~ 26 (305)
T cd01826 7 GNSQPMGVILLGDSAGAHFH 26 (305)
T ss_pred CCCCCceEEEeccccccccc
Confidence 34456779999999999854
No 310
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=21.92 E-value=4.1e+02 Score=23.58 Aligned_cols=61 Identities=18% Similarity=0.143 Sum_probs=38.3
Q ss_pred HHHHHHHHhhCCcEEEeecCCCCC---------------CCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEe
Q 040187 106 DDACRRLAVEVPAVVISVNYRRSP---------------EHRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAG 170 (299)
Q Consensus 106 ~~~~~~la~~~g~~v~~~dyr~~~---------------~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G 170 (299)
...++.|+ ++||.|..+-|.... +..-|..++++...++.+.+. .|=++|
T Consensus 191 ~nIlr~L~-~rg~~vtVVP~~t~~eeIl~~~pDGiflSNGPGDP~~~~~~i~~ik~l~~~--------------~iPifG 255 (368)
T COG0505 191 RNILRELV-KRGCRVTVVPADTSAEEILALNPDGIFLSNGPGDPAPLDYAIETIKELLGT--------------KIPIFG 255 (368)
T ss_pred HHHHHHHH-HCCCeEEEEcCCCCHHHHHhhCCCEEEEeCCCCChhHHHHHHHHHHHHhcc--------------CCCeEE
Confidence 56788887 889999999988432 112234444444444444332 245899
Q ss_pred cChhHHHHHHH
Q 040187 171 DSAGGNLAHNV 181 (299)
Q Consensus 171 ~S~GG~lA~~~ 181 (299)
-++|=.|-...
T Consensus 256 ICLGHQllalA 266 (368)
T COG0505 256 ICLGHQLLALA 266 (368)
T ss_pred EcHHHHHHHHh
Confidence 99998865444
No 311
>PF14041 Lipoprotein_21: LppP/LprE lipoprotein
Probab=21.43 E-value=2e+02 Score=19.48 Aligned_cols=18 Identities=28% Similarity=0.576 Sum_probs=12.7
Q ss_pred CccEEEEEcCCccccccCC
Q 040187 83 NLPVIVYFHGGGFAILAAN 101 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~ 101 (299)
+.-.+++||.|-|+ |...
T Consensus 24 ~~~~vl~Fh~G~fi-Gt~t 41 (89)
T PF14041_consen 24 SPQQVLFFHDGEFI-GTAT 41 (89)
T ss_pred CCeEEEEEECCEEc-ccCC
Confidence 34678999999887 4443
No 312
>cd03016 PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes an
Probab=21.34 E-value=1.2e+02 Score=24.16 Aligned_cols=41 Identities=10% Similarity=0.150 Sum_probs=25.6
Q ss_pred ccEEEEEcCCccccccCC-CchhHHHHHHHHhhCCcEEEeecC
Q 040187 84 LPVIVYFHGGGFAILAAN-SKVYDDACRRLAVEVPAVVISVNY 125 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~-~~~~~~~~~~la~~~g~~v~~~dy 125 (299)
.++||++|-+.|+-.... ...+......+. +.|+.|+.+..
T Consensus 26 k~vvlf~~pa~~cp~C~~el~~l~~~~~~f~-~~gv~vigvS~ 67 (203)
T cd03016 26 SWGILFSHPADFTPVCTTELGAFAKLAPEFK-KRNVKLIGLSV 67 (203)
T ss_pred CEEEEEEecCCCCCcCHHHHHHHHHHHHHHH-HcCCEEEEEEC
Confidence 578899999988754332 222233444554 67888887743
No 313
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=21.31 E-value=5.7e+02 Score=22.52 Aligned_cols=46 Identities=17% Similarity=0.223 Sum_probs=32.9
Q ss_pred CCCCcEEEEecChhHHHHHHHHHHhc---cCCCCCCccceEEEecccCC
Q 040187 161 ADIKQCFLAGDSAGGNLAHNVAVLAD---GCNFSRLRLNGLIAIQPFFG 206 (299)
Q Consensus 161 ~d~~~i~l~G~S~GG~lA~~~a~~~~---~~~~~~~~~~~~i~~~p~~~ 206 (299)
......+++-.|.||-+|..+++... +++.-...+.+|++-.+|+.
T Consensus 119 ~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 119 FKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred ccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 45678999999999999999987653 22211236778888766653
No 314
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=21.15 E-value=1.4e+02 Score=26.11 Aligned_cols=18 Identities=33% Similarity=0.076 Sum_probs=15.2
Q ss_pred EEEecChhHHHHHHHHHH
Q 040187 167 FLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 167 ~l~G~S~GG~lA~~~a~~ 184 (299)
+++|||.|=..|+.++..
T Consensus 127 ~~~GHSlGE~aA~~~AG~ 144 (343)
T PLN02752 127 VCAGLSLGEYTALVFAGA 144 (343)
T ss_pred eeeeccHHHHHHHHHhCC
Confidence 689999999988887743
No 315
>PF04263 TPK_catalytic: Thiamin pyrophosphokinase, catalytic domain; InterPro: IPR007371 Thiamin pyrophosphokinase (TPK, 2.7.6.2 from EC) catalyzes the transfer of a pyrophosphate group from ATP to vitamin B1 (thiamin) to form the coenzyme thiamin pyrophosphate (TPP). Thus, TPK is important for the formation of a coenzyme required for central metabolic functions. The structure of thiamin pyrophosphokinase suggests that the enzyme may operate by a mechanism of pyrophosphoryl transfer similar to those described for pyrophosphokinases functioning in nucleotide biosynthesis [].; GO: 0004788 thiamine diphosphokinase activity, 0005524 ATP binding, 0009229 thiamine diphosphate biosynthetic process; PDB: 2F17_B 1IG3_B 3S4Y_B 2OMK_B 1IG0_A 3MEL_B 3CQ9_A 3LM8_B 3K94_B 3L8M_B ....
Probab=21.03 E-value=3.4e+02 Score=19.78 Aligned_cols=55 Identities=15% Similarity=0.093 Sum_probs=32.5
Q ss_pred ccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChh
Q 040187 98 LAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAG 174 (299)
Q Consensus 98 g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~G 174 (299)
|+-++ ...-...+....|..++.. + ..-..|...|++++.+.. .++|+++|...|
T Consensus 42 GDfDS--i~~~~~~~~~~~~~~~~~~--------p-~kD~TD~e~Al~~~~~~~-----------~~~i~v~Ga~Gg 96 (123)
T PF04263_consen 42 GDFDS--ISPEVLEFYKSKGVEIIHF--------P-EKDYTDLEKALEYAIEQG-----------PDEIIVLGALGG 96 (123)
T ss_dssp C-SSS--S-HHHHHHHHHCTTEEEEE----------STTS-HHHHHHHHHHHTT-----------TSEEEEES-SSS
T ss_pred ecCCC--CChHHHHHHHhhccceecc--------c-ccccCHHHHHHHHHHHCC-----------CCEEEEEecCCC
Confidence 44444 2334444445677777542 1 234579999999996654 568999997665
No 316
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=20.93 E-value=1.4e+02 Score=25.01 Aligned_cols=20 Identities=35% Similarity=0.192 Sum_probs=16.2
Q ss_pred cEEEEecChhHHHHHHHHHH
Q 040187 165 QCFLAGDSAGGNLAHNVAVL 184 (299)
Q Consensus 165 ~i~l~G~S~GG~lA~~~a~~ 184 (299)
.-+++|||.|=..|+.++..
T Consensus 84 p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 84 PDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred CCEEeecCHHHHHHHHHhCC
Confidence 35899999999988887743
No 317
>TIGR02740 TraF-like TraF-like protein. This protein is related to the F-type conjugation system pilus assembly proteins TraF (TIGR02739)and TrbB (TIGR02738) both of which exhibit a thioredoxin fold. The protein represented by this model has the same length and architecture as TraF, but lacks the CXXC-motif found in TrbB and believed to be responsible for the disulfide isomerase activity of that protein.
Probab=20.92 E-value=2.3e+02 Score=24.00 Aligned_cols=50 Identities=10% Similarity=0.088 Sum_probs=32.9
Q ss_pred CccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeecCCCCCCCCCCch
Q 040187 83 NLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVNYRRSPEHRCPSQ 136 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~dyr~~~~~~~~~~ 136 (299)
..++||+|.-+ ||-.+.. ..+.+..++.+.|+.|+.++....+...+|..
T Consensus 166 ~k~~Lv~F~As-wCp~C~~---~~P~L~~la~~yg~~Vi~VsvD~~~~~~fp~~ 215 (271)
T TIGR02740 166 KKSGLFFFFKS-DCPYCHQ---QAPILQAFEDRYGIEVLPVSVDGGPLPGFPNA 215 (271)
T ss_pred CCeEEEEEECC-CCccHHH---HhHHHHHHHHHcCcEEEEEeCCCCccccCCcc
Confidence 45788888875 5533322 45677888888898888777765443345544
No 318
>cd00423 Pterin_binding Pterin binding enzymes. This family includes dihydropteroate synthase (DHPS) and cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). DHPS, a functional homodimer, catalyzes the condensation of p-aminobenzoic acid (pABA) in the de novo biosynthesis of folate, which is an essential cofactor in both nucleic acid and protein biosynthesis. Prokaryotes (and some lower eukaryotes) must synthesize folate de novo, while higher eukaryotes are able to utilize dietary folate and therefore lack DHPS. Sulfonamide drugs, which are substrate analogs of pABA, target DHPS. Cobalamin-dependent methyltransferases catalyze the transfer of a methyl group via a methyl- cob(III)amide intermediate. These include MeTr, a functional heterodimer, and the folate binding domain of MetH.
Probab=20.62 E-value=2.2e+02 Score=23.72 Aligned_cols=54 Identities=17% Similarity=0.123 Sum_probs=30.9
Q ss_pred HHHHhhCCcEEEeecCCCCCC-----CCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEE
Q 040187 110 RRLAVEVPAVVISVNYRRSPE-----HRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFL 168 (299)
Q Consensus 110 ~~la~~~g~~v~~~dyr~~~~-----~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l 168 (299)
..++.+.|+.++....+..|. ..++...++..+.++...+... +.|++.++|++
T Consensus 113 ~~l~~~~~~~vV~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~Gi~~~~Iil 171 (258)
T cd00423 113 APLAAEYGAPVVLMHMDGTPQTMQNNPYYADVVDEVVEFLEERVEAAT-----EAGIPPEDIIL 171 (258)
T ss_pred HHHHHHcCCCEEEECcCCCCcccccCCCcchHHHHHHHHHHHHHHHHH-----HcCCCHHHEEE
Confidence 345557888888776655433 2235555555555555544442 45666777665
No 319
>cd01523 RHOD_Lact_B Member of the Rhodanese Homology Domain superfamily. This CD includes predicted proteins with rhodanese-like domains found N-terminal of the metallo-beta-lactamase domain.
Probab=20.55 E-value=2.4e+02 Score=19.08 Aligned_cols=29 Identities=21% Similarity=0.098 Sum_probs=18.0
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEE
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVV 120 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v 120 (299)
...|+|++|++|+ .+ ...+..| .+.||.+
T Consensus 60 ~~~~ivv~C~~G~-----rs----~~aa~~L-~~~G~~~ 88 (100)
T cd01523 60 DDQEVTVICAKEG-----SS----QFVAELL-AERGYDV 88 (100)
T ss_pred CCCeEEEEcCCCC-----cH----HHHHHHH-HHcCcee
Confidence 3468999998753 11 2334455 4789984
No 320
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=20.42 E-value=5.5e+02 Score=21.97 Aligned_cols=37 Identities=14% Similarity=0.097 Sum_probs=23.2
Q ss_pred CccEEEEEcCCccccccCCCc--hhHHHHHHHHhhCCcEEEe
Q 040187 83 NLPVIVYFHGGGFAILAANSK--VYDDACRRLAVEVPAVVIS 122 (299)
Q Consensus 83 ~~p~vv~~HGGg~~~g~~~~~--~~~~~~~~la~~~g~~v~~ 122 (299)
..+.++++|||++. .+.+. .|..+++.+. +.|+.++.
T Consensus 177 ~~~~i~~~~~~s~~--~k~Wp~e~~a~li~~l~-~~~~~ivl 215 (322)
T PRK10964 177 AGPYLVFLHATTRD--DKHWPEAHWRELIGLLA-PSGLRIKL 215 (322)
T ss_pred CCCeEEEEeCCCcc--cccCCHHHHHHHHHHHH-HCCCeEEE
Confidence 34678889998753 33332 3556777775 56877654
No 321
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=20.41 E-value=1.6e+02 Score=25.24 Aligned_cols=21 Identities=33% Similarity=0.199 Sum_probs=17.7
Q ss_pred cEEEEecChhHHHHHHHHHHh
Q 040187 165 QCFLAGDSAGGNLAHNVAVLA 185 (299)
Q Consensus 165 ~i~l~G~S~GG~lA~~~a~~~ 185 (299)
--+|.|.|+|+.++..+|...
T Consensus 40 ~~~iaGtS~GAiva~l~A~g~ 60 (306)
T COG1752 40 IDVIAGTSAGAIVAALYAAGM 60 (306)
T ss_pred ccEEEecCHHHHHHHHHHcCC
Confidence 357899999999999998753
No 322
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=20.36 E-value=1.5e+02 Score=25.07 Aligned_cols=20 Identities=35% Similarity=0.263 Sum_probs=16.5
Q ss_pred CcEEEEecChhHHHHHHHHH
Q 040187 164 KQCFLAGDSAGGNLAHNVAV 183 (299)
Q Consensus 164 ~~i~l~G~S~GG~lA~~~a~ 183 (299)
....++|||.|=..|+.++.
T Consensus 76 ~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 76 RPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred CCcEEeecCHHHHHHHHHhC
Confidence 45689999999988888764
No 323
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=20.24 E-value=3.1e+02 Score=25.72 Aligned_cols=68 Identities=9% Similarity=0.024 Sum_probs=39.2
Q ss_pred CCCCchhHHHHHHHHHHHhhcCCCCCCCCCCCCCcEEEEecChhHHHHHHHHHHhccCCCCCCccceEEEeccc
Q 040187 131 HRCPSQYEDGIDALKFIDSSFIDIQNFPACADIKQCFLAGDSAGGNLAHNVAVLADGCNFSRLRLNGLIAIQPF 204 (299)
Q Consensus 131 ~~~~~~~~D~~~a~~~l~~~~~~~~~~~~~~d~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~~~i~~~p~ 204 (299)
+++...++-+.+|=+.|.+... .......+|-++|+|.|+..-......+.++. .-.-+.-|+++...
T Consensus 419 npWnia~dRa~kaG~lLAe~L~-----~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkk-e~~iIEnViL~GaP 486 (633)
T KOG2385|consen 419 NPWNIALDRADKAGELLAEALC-----KRSQGNRPVTLVGFSLGARVIFECLLELAKKK-EVGIIENVILFGAP 486 (633)
T ss_pred CchHHHhhHHHHHHHHHHHHHH-----HhccCCCceeEeeeccchHHHHHHHHHHhhcc-cccceeeeeeccCC
Confidence 4444455555555444443321 11134577999999999998886666544321 12256677776543
No 324
>cd01518 RHOD_YceA Member of the Rhodanese Homology Domain superfamily. This CD includes Escherichia coli YceA, Bacillus subtilis YbfQ, and similar uncharacterized proteins.
Probab=20.19 E-value=1.8e+02 Score=19.84 Aligned_cols=31 Identities=26% Similarity=0.222 Sum_probs=18.0
Q ss_pred CCccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcE-EEe
Q 040187 82 TNLPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAV-VIS 122 (299)
Q Consensus 82 ~~~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~-v~~ 122 (299)
+..++|||+.+|.. + ...+..| .+.|+. |..
T Consensus 60 ~~~~ivvyC~~G~r-----s----~~a~~~L-~~~G~~~v~~ 91 (101)
T cd01518 60 KGKKVLMYCTGGIR-----C----EKASAYL-KERGFKNVYQ 91 (101)
T ss_pred CCCEEEEECCCchh-----H----HHHHHHH-HHhCCcceee
Confidence 45689999987542 1 2223444 477985 543
No 325
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=20.15 E-value=1.6e+02 Score=22.66 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=21.8
Q ss_pred ccEEEEEcCCccccccCCCchhHHHHHHHHhhCCcEEEeec
Q 040187 84 LPVIVYFHGGGFAILAANSKVYDDACRRLAVEVPAVVISVN 124 (299)
Q Consensus 84 ~p~vv~~HGGg~~~g~~~~~~~~~~~~~la~~~g~~v~~~d 124 (299)
+|.+||+-|- .|+..+..-..+.++|. +.|..|+.+|
T Consensus 1 ~g~vIwltGl---sGsGKtTlA~~L~~~L~-~~g~~~~~LD 37 (156)
T PF01583_consen 1 KGFVIWLTGL---SGSGKTTLARALERRLF-ARGIKVYLLD 37 (156)
T ss_dssp S-EEEEEESS---TTSSHHHHHHHHHHHHH-HTTS-EEEEE
T ss_pred CCEEEEEECC---CCCCHHHHHHHHHHHHH-HcCCcEEEec
Confidence 3789999992 24443322333444554 7799999888
Done!