BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040199
(502 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/443 (25%), Positives = 217/443 (48%), Gaps = 38/443 (8%)
Query: 67 DWYTHLLAKSPTGTIHLHVLGNT--ITSNPGNVE-YILKTRFDNYPKG-KPFSVILGD-L 121
DW AK + ++V T I ++P +V+ +++ T+++ K + + G+ L
Sbjct: 18 DW-----AKKYGPVVRVNVFHKTSVIVTSPESVKKFLMSTKYNKDSKMYRALQTVFGERL 72
Query: 122 LGRGIFN-VDGDSWEFQRKMACFELGSFNIKMYALELVTAEIRSRLIPLLSSAANKDNNI 180
G+G+ + + + W QR++ +L + +L E +L+ +L + A+ +
Sbjct: 73 FGQGLVSECNYERWHKQRRV--IDLAFSRSSLVSLMETFNEKAEQLVEILEAKADGQTPV 130
Query: 181 LDLQDVFRRFSFDSICKFSFGLDPECLM-LNLPVSKFATAFDLASKLSAERALAPSPIVW 239
+QD+ + D + K +FG++ L+ P+S+ + ++A R +
Sbjct: 131 -SMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKL--MLEGITASRNTLAKFLPG 187
Query: 240 KIKRLLNIGSEKQLKGAINLVNELAETMIHQRQQM---GFSKKNDLLSRFMASID---DD 293
K K+L ++++ +I + ++ + +R++ G D+L++ + + + DD
Sbjct: 188 KRKQL------REVRESIRFLRQVGRDWVQRRREALKRGEEVPADILTQILKAEEGAQDD 241
Query: 294 KYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLR 353
+ L D V+F +AG +T A+ L LS+ PE+ + ++ E D+++ + L FE L
Sbjct: 242 EGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYL-DFEDLG 300
Query: 354 ELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGP 413
L YL+ + ES+RL+PP + +E+ ++ DG V T + + Y MGRM+ +
Sbjct: 301 RLQYLSQVLKESLRLYPPAWGTFRLLEEETLI-DGVRVPGNTPLLFSTYVMGRMD-TYFE 358
Query: 414 DCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVS 473
D L F P R+ G P+ F Y F GHR C+G+ A +E+K V ++++ R+
Sbjct: 359 DPLTFNPDRF---GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLV 415
Query: 474 DPNQAPRFAPGLTATVRGGLPVM 496
P Q RF AT++ PV+
Sbjct: 416 -PGQ--RFGLQEQATLKPLDPVL 435
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 125/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 204 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 262
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 263 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 319
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P V S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 320 VLNEALRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 379
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 380 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 425
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+GK AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGKQFALHEATLVLGMMLKHFD 422
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R +V
Sbjct: 207 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLHGKDPETGEPLDDENIRYQIV 265
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 266 TFLIAGHETT-SGLLSFTLYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 322
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 323 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRP 382
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 383 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 428
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL++ + D DD + ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTQMLNGKDPETGEPLDDGNISYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V + E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKVAEEATRVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG V + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 260
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 261 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 317
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 318 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 378 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 260
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 261 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 317
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 318 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 378 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 204 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 262
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 263 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 319
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 320 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 379
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 380 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 425
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 204 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 262
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 263 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 319
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 320 VLNEALRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 379
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 380 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 425
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 260
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 261 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 317
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 318 VLNEALRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 378 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG ++ SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHEST-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG ++ SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHEST-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 260
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG ++ SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 261 TFLIAGHEST-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 317
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 318 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 378 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK + G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PYGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 122/228 (53%), Gaps = 13/228 (5%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLHGKDPETGEPLDDENIRYQII 260
Query: 302 SFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAA 361
+FL+AG +T + LT + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 261 TFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGMV 318
Query: 362 VYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQ 421
+ E++R++P S +A+ED +L + KG + + R + +WG D EF+P+
Sbjct: 319 LNEALRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPE 378
Query: 422 RWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 379 RF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 123/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACEGQQFALHEATLVLGMMLKHFD 422
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 123/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+ G +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLICGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 123/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG + SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHEAT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 123/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG + SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHENT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 123/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+ G +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIEGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 123/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG + SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHEAT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 123/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+ G +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIMGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 123/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 260
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 261 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 317
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 318 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C G+ AL E V +++ F+
Sbjct: 378 ERF-ENPSAIPQHAFK--PFGNGQRACPGQQFALHEATLVLGMMLKHFD 423
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 123/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+ G +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIQGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK + G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PWGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 123/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+ G +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIKGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 123/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG + SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHEAT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 123/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+ G +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIHGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 123/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PHGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK P G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK-PAGN-GQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 123/230 (53%), Gaps = 17/230 (7%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF--FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
+FL AG + SGL SF ++L+ E++ A + ++ P + S++Q+++L Y+
Sbjct: 260 TFLAAGHEAT-SGLLSFALYFLVKNPHELQKAAEEAARVLVDP---VPSYKQVKQLKYVG 315
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFK 419
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+
Sbjct: 316 MVLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFR 375
Query: 420 PQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
P+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 376 PERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 123/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+ L+AG +T SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TELIAGHETT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 115/217 (52%), Gaps = 12/217 (5%)
Query: 259 LVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY------LRDIVVSFLLAGRDTVA 312
L+ EL E +I RQQ S++ D L +A+ DD+ L+D ++ L AG +T+
Sbjct: 203 LLAEL-EKIIKARQQQPPSEE-DALGILLAARDDNNQPLSLPELKDQILLLLFAGHETLT 260
Query: 313 SGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPV 372
S L+SF LL QH ++ +R E +K ++ +Q+L + E L+++ YL+ + E +RL PPV
Sbjct: 261 SALSSFCLLLGQHSDIRERVRQEQNK-LQLSQELTA-ETLKKMPYLDQVLQEVLRLIPPV 318
Query: 373 QFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQRWLRNGRFVPE 432
+ +D G KG V+Y + + PD +F P+R+ +G
Sbjct: 319 GGGFRELIQDCQF-QGFHFPKGWLVSYQ-ISQTHADPDLYPDPEKFDPERFTPDGSATHN 376
Query: 433 NPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
PF + F G R CLGK+ A +EMK A ++++F+
Sbjct: 377 PPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFD 413
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 122/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 201 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 259
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL AG + SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 260 TFLAAGHEAT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 316
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 317 VLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 376
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 377 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 422
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 122/229 (53%), Gaps = 15/229 (6%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASID-------DDKYLRDIVV 301
+++Q + I ++N+L + +I R+ G + +DLL+ + D DD+ +R ++
Sbjct: 202 NKRQFQEDIKVMNDLVDKIIADRKASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQII 260
Query: 302 SFLLAGRDTVASGLTSF-FWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
+FL AG + SGL SF + L ++P V E+ +++ + S++Q+++L Y+
Sbjct: 261 TFLAAGHEAT-SGLLSFALYFLVKNPHVLQKAAEEAARVLV--DPVPSYKQVKQLKYVGM 317
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
+ E++RL+P S +A+ED +L + KG + + R + IWG D EF+P
Sbjct: 318 VLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRP 377
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+R+ N +P++ FK F G R C+G+ AL E V +++ F+
Sbjct: 378 ERF-ENPSAIPQHAFK--PFGNGQRACIGQQFALHEATLVLGMMLKHFD 423
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 182/387 (47%), Gaps = 47/387 (12%)
Query: 102 KTRFDNYPKGKPFSVILGDLLGRGIFNVDGDSWEFQR---KMACFELGSFNIK-MYALEL 157
++RFD P + DL G G+F SW ++ K L SF+ + M
Sbjct: 65 ESRFDKNLSQAP--KFVRDLAGDGLFT----SWTHEKNWKKAHNILLPSFSQQAMKGYHA 118
Query: 158 VTAEIRSRLIPLLSSAANKDNNILDLQDVFRRFSFDSI--CKFSFGLDPECLMLNLP--- 212
+ +I +L+ N D +I ++ + R + D+I C F++ + + P
Sbjct: 119 MMVDIAVQLVQKWERL-NADEHI-EVPEDMTRLTLDTIGLCGFNYRFN--SFYRDQPHPF 174
Query: 213 VSKFATAFDLA-SKLSAERALAPSPIVWKIKRLLNIGSEKQLKGAINLVNELAETMIHQR 271
++ A D A +KL RA P + KR Q + I ++N+L + +I R
Sbjct: 175 ITSMVRALDEAMNKL--RRANPDDPAYDENKR--------QFQEDIKVMNDLVDKIIADR 224
Query: 272 QQMGFSKKNDLLSRFMASID-------DDKYLRDIVVSFLLAGRDTVASGLTSF--FWLL 322
+ G + +DLL+ + D DD+ +R +++FL AG + SGL SF ++L+
Sbjct: 225 KASG-EQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEAT-SGLLSFALYFLV 282
Query: 323 SQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQED 382
E++ A + ++ P + S +Q+++L Y+ + E++RL+P S +A+ED
Sbjct: 283 KNPHELQKAAEEAARVLVDP---VPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKED 339
Query: 383 DILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQRWLRNGRFVPENPFKYPVFQA 442
+L + KG + + R + +WG D EF+P+R+ N +P++ FK F
Sbjct: 340 TVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERF-ENPSAIPQHAFK--PFGN 396
Query: 443 GHRVCLGKDIALVEMKSVALAVVRKFN 469
G R C+G+ AL E V +++ F+
Sbjct: 397 GQRACIGQQFALHEATLVLGMMLKHFD 423
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 152/316 (48%), Gaps = 28/316 (8%)
Query: 181 LDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFAT------AFDLASKLSAERALAP 234
+ L+DVF +S D I SFG++ + L N P F FD ++
Sbjct: 148 VTLKDVFGAYSMDVITSTSFGVNIDSL--NNPQDPFVENTKKLLRFDFLDPFFL--SITV 203
Query: 235 SPIVWKIKRLLNIGSEKQ-----LKGAINLVNE--LAETMIHQRQ--QMGFSKKNDLLSR 285
P + I +LNI + L+ ++ + E L +T H+ Q+ +N +
Sbjct: 204 FPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETE 263
Query: 286 FMASIDDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQD 345
++ D + + ++ F+ AG +T +S L+ + L+ HP+V+ ++ E D ++ PN+
Sbjct: 264 SHKALSDLELVAQSII-FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVL-PNKA 321
Query: 346 LVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMG 405
+++ + ++ YL+ V E++RLFP + + + D+ +G F+ KG V YA+
Sbjct: 322 PPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALH 380
Query: 406 RMERIWGPDCLEFKPQRWLRNGRFVPEN--PFKYPVFQAGHRVCLGKDIALVEMKSVALA 463
R + W + +F P+R+ + + +N P+ Y F +G R C+G AL+ MK +
Sbjct: 381 RDPKYWT-EPEKFLPERFSKKNK---DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIR 436
Query: 464 VVRKFNIRVSDPNQAP 479
V++ F+ + Q P
Sbjct: 437 VLQNFSFKPCKETQIP 452
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 152/316 (48%), Gaps = 28/316 (8%)
Query: 181 LDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFAT------AFDLASKLSAERALAP 234
+ L+DVF +S D I SFG++ + L N P F FD ++
Sbjct: 149 VTLKDVFGAYSMDVITSTSFGVNIDSL--NNPQDPFVENTKKLLRFDFLDPFFL--SITV 204
Query: 235 SPIVWKIKRLLNIGSEKQ-----LKGAINLVNE--LAETMIHQRQ--QMGFSKKNDLLSR 285
P + I +LNI + L+ ++ + E L +T H+ Q+ +N +
Sbjct: 205 FPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETE 264
Query: 286 FMASIDDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQD 345
++ D + + ++ F+ AG +T +S L+ + L+ HP+V+ ++ E D ++ PN+
Sbjct: 265 SHKALSDLELVAQSII-FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVL-PNKA 322
Query: 346 LVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMG 405
+++ + ++ YL+ V E++RLFP + + + D+ +G F+ KG V YA+
Sbjct: 323 PPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALH 381
Query: 406 RMERIWGPDCLEFKPQRWLRNGRFVPEN--PFKYPVFQAGHRVCLGKDIALVEMKSVALA 463
R + W + +F P+R+ + + +N P+ Y F +G R C+G AL+ MK +
Sbjct: 382 RDPKYWT-EPEKFLPERFSKKNK---DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIR 437
Query: 464 VVRKFNIRVSDPNQAP 479
V++ F+ + Q P
Sbjct: 438 VLQNFSFKPCKETQIP 453
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 152/316 (48%), Gaps = 28/316 (8%)
Query: 181 LDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFAT------AFDLASKLSAERALAP 234
+ L+DVF +S D I SFG++ + L N P F FD ++
Sbjct: 150 VTLKDVFGAYSMDVITSTSFGVNIDSL--NNPQDPFVENTKKLLRFDFLDPFFL--SITV 205
Query: 235 SPIVWKIKRLLNIGSEKQ-----LKGAINLVNE--LAETMIHQRQ--QMGFSKKNDLLSR 285
P + I +LNI + L+ ++ + E L +T H+ Q+ +N +
Sbjct: 206 FPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNSKETE 265
Query: 286 FMASIDDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQD 345
++ D + + ++ F+ AG +T +S L+ + L+ HP+V+ ++ E D ++ PN+
Sbjct: 266 SHKALSDLELVAQSII-FIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVL-PNKA 323
Query: 346 LVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMG 405
+++ + ++ YL+ V E++RLFP + + + D+ +G F+ KG V YA+
Sbjct: 324 PPTYDTVLQMEYLDMVVNETLRLFP-IAMRLERVCKKDVEINGMFIPKGVVVMIPSYALH 382
Query: 406 RMERIWGPDCLEFKPQRWLRNGRFVPEN--PFKYPVFQAGHRVCLGKDIALVEMKSVALA 463
R + W + +F P+R+ + + +N P+ Y F +G R C+G AL+ MK +
Sbjct: 383 RDPKYWT-EPEKFLPERFSKKNK---DNIDPYIYTPFGSGPRNCIGMRFALMNMKLALIR 438
Query: 464 VVRKFNIRVSDPNQAP 479
V++ F+ + Q P
Sbjct: 439 VLQNFSFKPCKETQIP 454
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 167/386 (43%), Gaps = 27/386 (6%)
Query: 125 GIFNVDGDSWEFQRKMACFELGSFN-IKMYALELVTAEIRSRLIPLLSSAANKDNNILDL 183
G+ ++G W QR + F+ +++ L+ E+ + + + ++ I DL
Sbjct: 114 GLMILEGQEW--QRVRSAFQKKLMKPVEIMKLDKKINEVLADFLERMDELCDERGRIPDL 171
Query: 184 QDVFRRFSFDSIC----KFSFGL-----DPECLMLNLPVSKFATAFDLASKLSAERALAP 234
++SF+SIC + FGL + E L + + F E
Sbjct: 172 YSELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGKMMVTPVELHKRL 231
Query: 235 SPIVWKIKRLLNIGSEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDK 294
+ VW+ L K +K I+ N L QQ G D+ + S K
Sbjct: 232 NTKVWQAHTLAWDTIFKSVKPCID--NRLQ----RYSQQPGADFLCDIYQQDHLS---KK 282
Query: 295 YLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRE 354
L V LA +T A+ L + LS++P+ + + E ++ NQ + E LR
Sbjct: 283 ELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRA-EDLRN 341
Query: 355 LHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPD 414
+ YL A + ESMRL P V F ++ + +L + KGT +T + +G E + D
Sbjct: 342 MPYLKACLKESMRLTPSVPFTTRTLDKPTVLGEYALP-KGTVLTLNTQVLGSSEDNFE-D 399
Query: 415 CLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVSD 474
+F+P+RWL+ + + NPF + F G R+C+G+ +A +++ +++K++I +D
Sbjct: 400 SHKFRPERWLQKEKKI--NPFAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYDIVATD 457
Query: 475 PNQAPRFAPGLTATVRGGLPVMVQER 500
G+ R LP+ + R
Sbjct: 458 NEPVEMLHLGILVPSR-ELPIAFRPR 482
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 119/246 (48%), Gaps = 15/246 (6%)
Query: 245 LNIGSEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDD------DKYLRD 298
L + + ++ A+ ++ L + +I +R+ G K +DLL+ + + DD ++ + D
Sbjct: 208 LPLPANRRFNDALADLHLLVDEIIAERRASG-QKPDDLLTALLEAKDDNGDPIGEQEIHD 266
Query: 299 IVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYL 358
VV+ L G +T+AS + L+ HPE IR+E + + V+FE +R+L +
Sbjct: 267 QVVAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRP--VAFEDVRKLRHT 324
Query: 359 NAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEF 418
+ E+MRL P V ++ A + L G + G + Y PYA+ R + + D LEF
Sbjct: 325 GNVIVEAMRLRPAVWVLTRRAVAESEL-GGYRIPAGADIIYSPYAIQRDPKSYD-DNLEF 382
Query: 419 KPQRWL-RNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNI-RVSDPN 476
P RWL VP+ K F AG R C ++ ++ + A+ K+ +V+ N
Sbjct: 383 DPDRWLPERAANVPKYAMK--PFSAGKRKCPSDHFSMAQLTLITAALATKYRFEQVAGSN 440
Query: 477 QAPRFA 482
A R
Sbjct: 441 DAVRVG 446
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 161/364 (44%), Gaps = 53/364 (14%)
Query: 126 IFNVDGDSWEFQRKMACFEL-GSFNIKMYALELVTAEIRSRLIPLLSSAANKDNNILDLQ 184
IFN + + W+ R L G ++M V AE + L N ++ +D+
Sbjct: 133 IFNNNPELWKTTRPFFMKALSGPGLVRMVT---VCAESLKTHLDRLEEVTN-ESGYVDVL 188
Query: 185 DVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSP-----IVW 239
+ RR D+ L L +P+ + A + A +AL P I W
Sbjct: 189 TLLRRVMLDT---------SNTLFLRIPLDESAIVVKIQGYFDAWQALLIKPDIFFKISW 239
Query: 240 KIKRLLNIGSEKQLKGAINLV-----------NELAETMIHQRQQMGFSKKNDLLSRFMA 288
K+ S K LK AI ++ +L E M + + K+ DL
Sbjct: 240 LYKKYEK--SVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGDLTR---- 293
Query: 289 SIDDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVS 348
+ + ++ L+A DT++ L +L+++HP VE AI E ++ +
Sbjct: 294 -----ENVNQCILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD--IK 346
Query: 349 FEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRME 408
+ +++L + +YESMR P V + A EDD++ DG V+KGT + + +GRM
Sbjct: 347 IDDIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVI-DGYPVKKGTNIILN---IGRMH 402
Query: 409 RI-WGPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRK 467
R+ + P EF + + +N + PF + G R C GK IA+V MK++ + ++R+
Sbjct: 403 RLEFFPKPNEFTLENFAKNVPYRYFQPFGF-----GPRGCAGKYIAMVMMKAILVTLLRR 457
Query: 468 FNIR 471
F+++
Sbjct: 458 FHVK 461
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 92/200 (46%), Gaps = 29/200 (14%)
Query: 300 VVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
V+ L+AG +TVAS LT F LLS P+ + + + + Q
Sbjct: 215 AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAALAAFQ--------------- 259
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFK 419
E++RL+PP ++ + +L + +GT + PY +R++ P+ F+
Sbjct: 260 ----EALRLYPPAWILTRRLERPLLLGEDRLP-QGTTLVLSPYV---TQRLYFPEGEAFQ 311
Query: 420 PQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVSDPNQAP 479
P+R+L R P +Y F G R+CLG+D AL+E V A R+F + DP P
Sbjct: 312 PERFLAE-RGTPSG--RYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRL---DPLPFP 365
Query: 480 RFAPGLTATVRGGLPVMVQE 499
R +T GGLP +E
Sbjct: 366 RVLAQVTLRPEGGLPARPRE 385
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 90/200 (45%), Gaps = 29/200 (14%)
Query: 300 VVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
V+ L+AG +TVAS LT F LLS P+ + + + + Q
Sbjct: 215 AVTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAALAAFQ--------------- 259
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFK 419
E++RL+PP ++ + +L + GT + PY +R+ PD F+
Sbjct: 260 ----EALRLYPPAWILTRRLERPLLLGEDRLP-PGTTLVLSPYV---TQRLHFPDGEAFR 311
Query: 420 PQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVSDPNQAP 479
P+R+L R P +Y F G R+CLG+D AL+E V A R+F + DP P
Sbjct: 312 PERFLEE-RGTPSG--RYFPFGLGQRLCLGRDFALLEGPIVLRAFFRRFRL---DPLPFP 365
Query: 480 RFAPGLTATVRGGLPVMVQE 499
R +T GGLP +E
Sbjct: 366 RVLAQVTLRPEGGLPARPRE 385
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 115/243 (47%), Gaps = 21/243 (8%)
Query: 248 GSEKQLKGAINLVNE-LAETMIHQRQQMGFSKKNDLLSRFMASIDDDKYLRD-------- 298
GS +++ + V E ++E + Q + + DL + ++ +K+ +
Sbjct: 209 GSHRKVIKNVAEVKEYVSERVKEHHQSLDPNCPRDLTDCLLVEMEKEKHSAERLYTMDGI 268
Query: 299 --IVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELH 356
V AG +T ++ L +L ++PE+E + E D+++ P++ + + + +E+
Sbjct: 269 TVTVADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSR-IPAIKDRQEMP 327
Query: 357 YLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRV--TYHPYAMGRMERIWGPD 414
Y++A V+E R V + D + G + KGT V T E PD
Sbjct: 328 YMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQE---FPD 384
Query: 415 CLEFKPQRWL-RNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIR-V 472
+FKP+ +L NG+F + FK F G RVC G+ +A +E+ + A+++ FN++ +
Sbjct: 385 PEKFKPEHFLNENGKFKYSDYFK--PFSTGKRVCAGEGLARMELFLLLCAILQHFNLKPL 442
Query: 473 SDP 475
DP
Sbjct: 443 VDP 445
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 105/211 (49%), Gaps = 9/211 (4%)
Query: 270 QRQQMGFSKKNDLLSRFM-ASIDDDKYLRD-----IVVSFLLAGRDTVASGLTSFFWLLS 323
Q+++ K +D+L + A+ D + L D +++ LLAG+ T ++ + L+
Sbjct: 221 QKRRQSQEKIDDILQTLLDATYKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLA 280
Query: 324 QHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDD 383
+ ++ E + N ++++QL++L+ L+ + E++RL PP+ + A+
Sbjct: 281 RDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQ 340
Query: 384 ILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQRWLRNGRFVPENPFKYPVFQAG 443
+ G + G +V P R++ W + L+F P R+L++ E F Y F AG
Sbjct: 341 TVA-GYTIPPGHQVCVSPTVNQRLKDSW-VERLDFNPDRYLQDNPASGEK-FAYVPFGAG 397
Query: 444 HRVCLGKDIALVEMKSVALAVVRKFNIRVSD 474
C+G++ A V++K++ ++R + + D
Sbjct: 398 RHRCIGENFAYVQIKTIWSTMLRLYEFDLID 428
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 121/249 (48%), Gaps = 37/249 (14%)
Query: 251 KQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDK-------YLRDIVVSF 303
K+L+G L + +A+ + H ++ + + D + F+ + +++ YL+++V++
Sbjct: 217 KELQG---LEDFIAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTT 273
Query: 304 L---LAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
L AG +TV++ L F LL +HPEVE+ + E D+++ N+ FE ++ Y A
Sbjct: 274 LNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKFEDRAKMPYTEA 332
Query: 361 AVYESMR--------LFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWG 412
++E R L V D+KF D LP KGT V ++ R R +
Sbjct: 333 VIHEIQRFGDMLPMGLAHRVNKDTKF--RDFFLP------KGTEVFPMLGSVLRDPRFFS 384
Query: 413 PDCLEFKPQRWL-RNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIR 471
+ +F PQ +L + G+F + F F G R C G+ +A +E+ +++ N R
Sbjct: 385 -NPRDFNPQHFLDKKGQFKKSDAFV--PFSIGKRYCFGEGLARMELFLFFTTIMQ--NFR 439
Query: 472 VSDPNQAPR 480
P Q+P+
Sbjct: 440 FKSP-QSPK 447
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 40/240 (16%)
Query: 263 LAETMIHQRQQMGFSKKNDLLSRFMASIDDDK-------YLRDIVVSFL---LAGRDTVA 312
+A+ + H ++ + + D + F+ + +++ YL+++V++ L AG +TV+
Sbjct: 226 IAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVS 285
Query: 313 SGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMR----- 367
+ L F LL +HPEVE+ + E D+++ N+ FE ++ Y+ A ++E R
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKFEDRAKMPYMEAVIHEIQRFGDVI 344
Query: 368 ---LFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAM-GRMER--IWGPDCLEFKPQ 421
L V+ D+KF D LP GT V Y M G + R + + +F PQ
Sbjct: 345 PMGLARRVKKDTKF--RDFFLPKGTEV----------YPMLGSVLRDPSFFSNPQDFNPQ 392
Query: 422 RWL-RNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVSDPNQAPR 480
+L G+F + F F G R C G+ +A +E+ V++ F ++ S Q+P+
Sbjct: 393 HFLNEKGQFKKSDAFV--PFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS---QSPK 447
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 117/240 (48%), Gaps = 40/240 (16%)
Query: 263 LAETMIHQRQQMGFSKKNDLLSRFMASIDDDK-------YLRDIVVSFL---LAGRDTVA 312
+A+ + H ++ + + D + F+ + +++ YL+++V++ L + G +TV+
Sbjct: 226 IAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVS 285
Query: 313 SGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYE-------- 364
+ L F LL +HPEVE+ + E D+++ N+ FE ++ Y+ A ++E
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKFEDRAKMPYMEAVIHEIQRFGDVI 344
Query: 365 SMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAM-GRMER--IWGPDCLEFKPQ 421
M L V+ D+KF D LP GT V Y M G + R + + +F PQ
Sbjct: 345 PMSLARRVKKDTKF--RDFFLPKGTEV----------YPMLGSVLRDPSFFSNPQDFNPQ 392
Query: 422 RWL-RNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVSDPNQAPR 480
+L G+F + F P F G R C G+ +A +E+ V++ F ++ S Q+P+
Sbjct: 393 HFLNEKGQFKKSDAF-VP-FSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS---QSPK 447
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 117/240 (48%), Gaps = 40/240 (16%)
Query: 263 LAETMIHQRQQMGFSKKNDLLSRFMASIDDDK-------YLRDIVVSFL---LAGRDTVA 312
+A+ + H ++ + + D + F+ + +++ YL+++V++ L + G +TV+
Sbjct: 226 IAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVS 285
Query: 313 SGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYE-------- 364
+ L F LL +HPEVE+ + E D+++ N+ FE ++ Y+ A ++E
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKFEDRAKMPYMEAVIHEIQRFGDVI 344
Query: 365 SMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAM-GRMER--IWGPDCLEFKPQ 421
M L V+ D+KF D LP GT V Y M G + R + + +F PQ
Sbjct: 345 PMSLARRVKKDTKF--RDFFLPKGTEV----------YPMLGSVLRDPSFFSNPQDFNPQ 392
Query: 422 RWL-RNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVSDPNQAPR 480
+L G+F + F P F G R C G+ +A +E+ V++ F ++ S Q+P+
Sbjct: 393 HFLNEKGQFKKSDAF-VP-FSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS---QSPK 447
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 116/240 (48%), Gaps = 40/240 (16%)
Query: 263 LAETMIHQRQQMGFSKKNDLLSRFMASIDDDK-------YLRDIVVSFL---LAGRDTVA 312
+A+ + H ++ + + D + F+ + +++ YL+++V++ L + G +TV+
Sbjct: 226 IAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVS 285
Query: 313 SGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYE-------- 364
+ L F LL +HPEVE+ + E D+++ N+ FE ++ Y+ A ++E
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKFEDRAKMPYMEAVIHEIQRFGDVI 344
Query: 365 SMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAM-GRMER--IWGPDCLEFKPQ 421
M L V+ D+KF D LP GT V Y M G + R + + +F PQ
Sbjct: 345 PMSLARRVKKDTKF--RDFFLPKGTEV----------YPMLGSVLRDPSFFSNPQDFNPQ 392
Query: 422 RWL-RNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVSDPNQAPR 480
+L G+F + F F G R C G+ +A +E+ V++ F ++ S Q+P+
Sbjct: 393 HFLNEKGQFKKSDAFV--PFSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS---QSPK 447
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 117/240 (48%), Gaps = 40/240 (16%)
Query: 263 LAETMIHQRQQMGFSKKNDLLSRFMASIDDDK-------YLRDIVVSFL---LAGRDTVA 312
+A+ + H ++ + + D + F+ + +++ YL+++V++ L + G +TV+
Sbjct: 226 IAKKVEHNQRTLDPNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVS 285
Query: 313 SGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYE-------- 364
+ L F LL +HPEVE+ + E D+++ N+ FE ++ Y+ A ++E
Sbjct: 286 TTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQ-PKFEDRAKMPYMEAVIHEIQRFGDVI 344
Query: 365 SMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAM-GRMER--IWGPDCLEFKPQ 421
M L V+ D+KF D LP GT V Y M G + R + + +F PQ
Sbjct: 345 PMSLARRVKKDTKF--RDFFLPKGTEV----------YPMLGSVLRDPSFFSNPQDFNPQ 392
Query: 422 RWL-RNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVSDPNQAPR 480
+L G+F + F P F G R C G+ +A +E+ V++ F ++ S Q+P+
Sbjct: 393 HFLNEKGQFKKSDAF-VP-FSIGKRNCFGEGLARMELFLFFTTVMQNFRLKSS---QSPK 447
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 6/202 (2%)
Query: 300 VVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
V ++AG +T + L ++ +P ++ ++ E D IM PN S++ ++ Y
Sbjct: 278 VGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGK-PSWDDKCKMPYTE 336
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFK 419
A ++E +R V A +D + G + KGT V + Y++ E+ W D F
Sbjct: 337 AVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWR-DPEVFH 395
Query: 420 PQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVSDPNQ-A 478
P+R+L + + + P F G R CLG+ +A +EM A++++F++ P++
Sbjct: 396 PERFLDSSGYFAKKEALVP-FSLGRRHCLGEHLARMEMFLFFTALLQRFHLHF--PHELV 452
Query: 479 PRFAPGLTATVRGGLPVMVQER 500
P P L T++ ++ ER
Sbjct: 453 PDLKPRLGMTLQPQPYLICAER 474
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 97/202 (48%), Gaps = 6/202 (2%)
Query: 300 VVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
V ++AG +T + L ++ +P ++ ++ E D IM PN S++ ++ Y
Sbjct: 278 VGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGK-PSWDDKCKMPYTE 336
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFK 419
A ++E +R V A +D + G + KGT V + Y++ E+ W D F
Sbjct: 337 AVLHEVLRFCNIVPLGIFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYWR-DPEVFH 395
Query: 420 PQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVSDPNQ-A 478
P+R+L + + + P F G R CLG+ +A +EM A++++F++ P++
Sbjct: 396 PERFLDSSGYFAKKEALVP-FSLGRRHCLGEHLARMEMFLFFTALLQRFHLHF--PHELV 452
Query: 479 PRFAPGLTATVRGGLPVMVQER 500
P P L T++ ++ ER
Sbjct: 453 PDLKPRLGMTLQPQPYLICAER 474
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 162/395 (41%), Gaps = 52/395 (13%)
Query: 113 PFSVILG-DLLGRGIFNVD-GDSWEFQRKMACFELGSFNIKMYALELVTAEIRSRLIPLL 170
P + ILG +G+F G +W QR+ + L + + +LE E + L
Sbjct: 83 PITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAF 142
Query: 171 SSAANKD---NNILD--LQDVF------RRFSFDSICKFSFGLDPECLMLNLPVSKFATA 219
++ + + N +LD + +V RRF +D DP L L
Sbjct: 143 ANHSGRPFRPNGLLDKAVSNVIASLTCGRRFEYD---------DPRFLRL---------- 183
Query: 220 FDLASKLSAERALAPSPIVWKIKRLLNIGS--EKQLKGAINLVNELAETMIHQRQQMGFS 277
DLA + E + ++ + LL+I + K L+ + +L E + R +
Sbjct: 184 LDLAQEGLKEESGFLREVLNAVPVLLHIPALAGKVLRFQKAFLTQLDELLTEHRMTWDPA 243
Query: 278 KK-NDLLSRFMASID----------DDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHP 326
+ DL F+A ++ +D+ LR +V AG T ++ L L+ HP
Sbjct: 244 QPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHP 303
Query: 327 EVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILP 386
+V+ ++ E D ++ + +Q + Y A ++E R V DI
Sbjct: 304 DVQRRVQQEIDDVIGQVRRPEMGDQA-HMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEV 362
Query: 387 DGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQRWL-RNGRFVPENPFKYPVFQAGHR 445
G + KGT + + ++ + E +W F P+ +L G FV P + F AG R
Sbjct: 363 QGFRIPKGTTLITNLSSVLKDEAVW-EKPFRFHPEHFLDAQGHFV--KPEAFLPFSAGRR 419
Query: 446 VCLGKDIALVEMKSVALAVVRKFNIRVSDPNQAPR 480
CLG+ +A +E+ ++++ F+ V P PR
Sbjct: 420 ACLGEPLARMELFLFFTSLLQHFSFSV--PTGQPR 452
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 112/259 (43%), Gaps = 22/259 (8%)
Query: 234 PSPIVWKIKRLL---NIGSEKQLKGAIN--LVNELAETMIHQRQQMGFSKKNDLLSRFMA 288
P+P +W++K+ + + EKQL+ + + + + Q +G + + + +
Sbjct: 218 PNPGLWRLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLL- 276
Query: 289 SIDDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDL-- 346
+ ++ VV + G +T AS L+ L HPE++ ++ E D+ + P
Sbjct: 277 ----EGHVHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSR 332
Query: 347 VSFEQLRELHYLNAAVYESMRLFP--PVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAM 404
V+++ L LNA + E +RL P P+ + + I G + +G V +
Sbjct: 333 VTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIF--GYDIPEGMVVIPNLQGA 390
Query: 405 GRMERIWGPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAV 464
E +W EF+P R+L G NP F G RVCLG+ +A +E+ V +
Sbjct: 391 HLDETVWE-QPHEFRPDRFLEPG----ANPSAL-AFGCGARVCLGESLARLELFVVLARL 444
Query: 465 VRKFNIRVSDPNQAPRFAP 483
++ F + P P
Sbjct: 445 LQAFTLLPPPVGALPSLQP 463
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 160/399 (40%), Gaps = 60/399 (15%)
Query: 113 PFSVILG-DLLGRGIFNVD-GDSWEFQRKMACFELGSFNIKMYALELVTAEIRSRLIPLL 170
P + ILG +G+F G +W QR+ + L + + +LE E + L
Sbjct: 83 PITQILGFGPRSQGVFLARYGPAWREQRRFSVSTLRNLGLGKKSLEQWVTEEAACLCAAF 142
Query: 171 SSAANKD---NNILD--LQDVF------RRFSFDSICKFSFGLDPECLMLNLPVSKFATA 219
++ + + N +LD + +V RRF +D DP L L
Sbjct: 143 ANHSGRPFRPNGLLDKAVSNVIASLTCGRRFEYD---------DPRFLRL---------- 183
Query: 220 FDLASKLSAERA------LAPSPIVWKIKRLLNIGSEKQLKGAINLVNELAETMIHQRQQ 273
DLA + E + L P+ I L + K L+ + +L E + R
Sbjct: 184 LDLAQEGLKEESGFLREVLNAVPVDRHIPAL----AGKVLRFQKAFLTQLDELLTEHRMT 239
Query: 274 MGFSKK-NDLLSRFMASID----------DDKYLRDIVVSFLLAGRDTVASGLTSFFWLL 322
++ DL F+A ++ +D+ LR +V AG T ++ L L+
Sbjct: 240 WDPAQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVVADLFSAGMVTTSTTLAWGLLLM 299
Query: 323 SQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQED 382
HP+V+ ++ E D ++ + +Q + Y A ++E R V
Sbjct: 300 ILHPDVQRRVQQEIDDVIGQVRRPEMGDQA-HMPYTTAVIHEVQRFGDIVPLGMTHMTSR 358
Query: 383 DILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQRWL-RNGRFVPENPFKYPVFQ 441
DI G + KGT + + ++ + E +W F P+ +L G FV P + F
Sbjct: 359 DIEVQGFRIPKGTTLITNLSSVLKDEAVW-EKPFRFHPEHFLDAQGHFV--KPEAFLPFS 415
Query: 442 AGHRVCLGKDIALVEMKSVALAVVRKFNIRVSDPNQAPR 480
AG R CLG+ +A +E+ ++++ F+ V P PR
Sbjct: 416 AGRRACLGEPLARMELFLFFTSLLQHFSFSV--PTGQPR 452
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 106/236 (44%), Gaps = 14/236 (5%)
Query: 251 KQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY----------LRDIV 300
K LK + + + E + ++ M + D + F+ ++ +K+ L +
Sbjct: 215 KLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTA 274
Query: 301 VSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
V AG +T ++ L LL +HPEV + ++ E ++++ N+ + + Y +A
Sbjct: 275 VDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRS-PCMQDRSHMPYTDA 333
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
V+E R + A DI + KGT + ++ + + P+ F P
Sbjct: 334 VVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEF-PNPEMFDP 392
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIR-VSDP 475
+L G ++ + P F AG R+C+G+ +A +E+ ++++ FN++ + DP
Sbjct: 393 HHFLDEGGNFKKSKYFMP-FSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDP 447
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 106/236 (44%), Gaps = 14/236 (5%)
Query: 251 KQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY----------LRDIV 300
K LK + + + E + ++ M + D + F+ ++ +K+ L +
Sbjct: 213 KLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTA 272
Query: 301 VSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
V AG +T ++ L LL +HPEV + ++ E ++++ N+ + + Y +A
Sbjct: 273 VDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRS-PCMQDRSHMPYTDA 331
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKP 420
V+E R + A DI + KGT + ++ + + P+ F P
Sbjct: 332 VVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEF-PNPEMFDP 390
Query: 421 QRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIR-VSDP 475
+L G ++ + P F AG R+C+G+ +A +E+ ++++ FN++ + DP
Sbjct: 391 HHFLDEGGNFKKSKYFMP-FSAGKRICVGEALAGMELFLFLTSILQNFNLKSLVDP 445
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 299 IVVSFLLAGRDTVASGLTSFFWL-LSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHY 357
+ +S + AG T +SG S+ + L +H + +A+ +E D++ + VSF LR++
Sbjct: 249 MFISMMFAGHHT-SSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS-VSFHALRQIPQ 306
Query: 358 LNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLE 417
L + E++RL PP+ + A+ + G + +G V P R+ + PD +
Sbjct: 307 LENVLKETLRLHPPLIILMRVAK-GEFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHD 364
Query: 418 FKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVSDPNQ 477
F P R+ + + N + + F AG C+G A++++K++ ++R++ ++ P +
Sbjct: 365 FVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPE 424
Query: 478 APR 480
+ R
Sbjct: 425 SYR 427
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 299 IVVSFLLAGRDTVASGLTSFFWL-LSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHY 357
+ +S + AG T +SG S+ + L +H + +A+ +E D++ + VSF LR++
Sbjct: 249 MFISMMFAGHHT-SSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS-VSFHALRQIPQ 306
Query: 358 LNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLE 417
L + E++RL PP+ + A+ + G + +G V P R+ + PD +
Sbjct: 307 LENVLKETLRLHPPLIILMRVAK-GEFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHD 364
Query: 418 FKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVSDPNQ 477
F P R+ + + N + + F AG C+G A++++K++ ++R++ ++ P +
Sbjct: 365 FVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPE 424
Query: 478 APR 480
+ R
Sbjct: 425 SYR 427
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 299 IVVSFLLAGRDTVASGLTSFFWL-LSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHY 357
+ +S + AG T +SG S+ + L +H + +A+ +E D++ + VSF LR++
Sbjct: 249 MFISMMFAGHHT-SSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS-VSFHALRQIPQ 306
Query: 358 LNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLE 417
L + E++RL PP+ + A+ + G + +G V P R+ + PD +
Sbjct: 307 LENVLKETLRLHPPLIILMRVAK-GEFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHD 364
Query: 418 FKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVSDPNQ 477
F P R+ + + N + + F AG C+G A++++K++ ++R++ ++ P +
Sbjct: 365 FVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPE 424
Query: 478 APR 480
+ R
Sbjct: 425 SYR 427
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 93/183 (50%), Gaps = 5/183 (2%)
Query: 299 IVVSFLLAGRDTVASGLTSFFWL-LSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHY 357
+ +S + AG T +SG S+ + L +H + +A+ +E D++ + VSF LR++
Sbjct: 249 MFISMMFAGHHT-SSGTASWTLIELMRHRDAYAAVIDELDELYGDGRS-VSFHALRQIPQ 306
Query: 358 LNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLE 417
L + E++RL PP+ + A+ + G + +G V P R+ + PD +
Sbjct: 307 LENVLKETLRLHPPLIILMRVAK-GEFEVQGHRIHEGDLVAASPAISNRIPEDF-PDPHD 364
Query: 418 FKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVSDPNQ 477
F P R+ + + N + + F AG C+G A++++K++ ++R++ ++ P +
Sbjct: 365 FVPARYEQPRQEDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEMAQPPE 424
Query: 478 APR 480
+ R
Sbjct: 425 SYR 427
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/378 (19%), Positives = 145/378 (38%), Gaps = 58/378 (15%)
Query: 123 GRGIFNVDGDSWEFQRKMACFELGSFNIKMYALELVTAEIRSRLIPLLSSAANKDNNILD 182
G G+ +G+ W+ R+ + + F + ++E I+ L+ ++D
Sbjct: 91 GYGVIFANGNRWKVLRRFSVTTMRDFGMGKRSVE---ERIQEEAQCLIEELRKSKGALMD 147
Query: 183 LQDVFRRFSFDSICKFSFG-----LDPECL-MLNLPVSKFATAFDLASKLSAERALAPSP 236
+F+ + + IC FG D E L MLNL F F L S + + S
Sbjct: 148 PTFLFQSITANIICSIVFGKRFHYQDQEFLKMLNL----FYQTFSLISSVFGQLFELFSG 203
Query: 237 IVWKIKRLLNIGSEKQLKGAINLVNE-LAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY 295
+ G+ +Q+ + +N + ++ R+ + S DL+ ++ ++ +K
Sbjct: 204 FLKHFP-----GAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKS 258
Query: 296 ----------LRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQD 345
L +S AG +T ++ L F L+ ++P V + E ++++ P++
Sbjct: 259 NAHSEFSHQNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRP 318
Query: 346 LVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMG 405
++ Y A +YE R D+LP G ++ Y +
Sbjct: 319 -PELHDRAKMPYTEAVIYEIQRF-------------SDLLPMGVPHIVTQHTSFRGYIIP 364
Query: 406 RMERIW--------GPDCLE----FKPQRWL-RNGRFVPENPFKYPVFQAGHRVCLGKDI 452
+ ++ P E F P +L NG F F G R+CLG+ I
Sbjct: 365 KDTEVFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTEAFI--PFSLGKRICLGEGI 422
Query: 453 ALVEMKSVALAVVRKFNI 470
A E+ +++ F++
Sbjct: 423 ARAELFLFFTTILQNFSM 440
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 109/239 (45%), Gaps = 29/239 (12%)
Query: 251 KQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY-------LRDIVVS- 302
K LK + +++ E + ++ M + D + F+ ++ +K + ++V++
Sbjct: 215 KLLKNLAFMESDILEKVKEHQESMDINNPRDFIDCFLIKMEKEKQNQQSEFTIENLVITA 274
Query: 303 --FLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
L AG +T ++ L LL +HPEV + ++ E ++++ N+ + + Y +A
Sbjct: 275 ADLLGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVVGRNRS-PCMQDRGHMPYTDA 333
Query: 361 AVYESMR---LFP-----PVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWG 412
V+E R L P V D KF + ++P GT + H +
Sbjct: 334 VVHEVQRYIDLIPTSLPHAVTCDVKF--RNYLIPKGTTILTSLTSVLH-------DNKEF 384
Query: 413 PDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIR 471
P+ F P+ +L G ++ + P F AG R+C+G+ +A +E+ +++ FN++
Sbjct: 385 PNPEMFDPRHFLDEGGNFKKSNYFMP-FSAGKRICVGEGLARMELFLFLTFILQNFNLK 442
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 136/345 (39%), Gaps = 40/345 (11%)
Query: 156 ELVTAEIRSRLIPLLSSA--------------ANKDNNILDLQDVFRRFSFDSICKFSFG 201
E++ E +PLL + A N D+ D RF+F+SI FG
Sbjct: 114 EVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFG 173
Query: 202 LDPECL--MLNLPVSKFATAFDLASKLSAERALAPSPIVWKIKRLLNIGSEKQLKGAINL 259
L ++N +F A S P + RL + K A ++
Sbjct: 174 ERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLF----RLFRTKTWKDHVAAWDV 229
Query: 260 VNELAETMIH----QRQQMGFSKKND---LLSRFMASIDDDKYLRDI---VVSFLLAGRD 309
+ A+ + +Q G S +D +L R + D DI V L G D
Sbjct: 230 IFSKADIYTQNFYWELRQKG-SVHHDYRGILYRLLG--DSKMSFEDIKANVTEMLAGGVD 286
Query: 310 TVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQ-DLVSFEQLRELHYLNAAVYESMRL 368
T + L + ++++ +V+ +R E Q D+ + QL L L A++ E++RL
Sbjct: 287 TTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL--LKASIKETLRL 344
Query: 369 FPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQRWLRNGR 428
P ++ D +L D K T V YA+GR E + D F P RWL +
Sbjct: 345 HPISVTLQRYLVNDLVLRDYMIPAK-TLVQVAIYALGR-EPTFFFDPENFDPTRWLSKDK 402
Query: 429 FVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVS 473
+ F+ F G R CLG+ IA +EM + ++ F + +
Sbjct: 403 NI--TYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQ 445
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 136/345 (39%), Gaps = 40/345 (11%)
Query: 156 ELVTAEIRSRLIPLLSSA--------------ANKDNNILDLQDVFRRFSFDSICKFSFG 201
E++ E +PLL + A N D+ D RF+F+SI FG
Sbjct: 117 EVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIFG 176
Query: 202 LDPECL--MLNLPVSKFATAFDLASKLSAERALAPSPIVWKIKRLLNIGSEKQLKGAINL 259
L ++N +F A S P + RL + K A ++
Sbjct: 177 ERQGMLEEVVNPEAQRFIDAIYQMFHTSVPMLNLPPDLF----RLFRTKTWKDHVAAWDV 232
Query: 260 VNELAETMIH----QRQQMGFSKKND---LLSRFMASIDDDKYLRDI---VVSFLLAGRD 309
+ A+ + +Q G S +D +L R + D DI V L G D
Sbjct: 233 IFSKADIYTQNFYWELRQKG-SVHHDYRGILYRLLG--DSKMSFEDIKANVTEMLAGGVD 289
Query: 310 TVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQ-DLVSFEQLRELHYLNAAVYESMRL 368
T + L + ++++ +V+ +R E Q D+ + QL L L A++ E++RL
Sbjct: 290 TTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL--LKASIKETLRL 347
Query: 369 FPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQRWLRNGR 428
P ++ D +L D K T V YA+GR E + D F P RWL +
Sbjct: 348 HPISVTLQRYLVNDLVLRDYMIPAK-TLVQVAIYALGR-EPTFFFDPENFDPTRWLSKDK 405
Query: 429 FVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVS 473
+ F+ F G R CLG+ IA +EM + ++ F + +
Sbjct: 406 NI--TYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFRVEIQ 448
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 155/401 (38%), Gaps = 46/401 (11%)
Query: 123 GRGIFNVDGDSWEFQRKMACFELGSFNIKMYALELVTAEIRSRLIPLL--SSAANKDNNI 180
G G+ +G+ W R+ + + F + ++E E L+ L S A DN +
Sbjct: 91 GYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTL 150
Query: 181 LDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSPIVWK 240
L F + + IC FG + PV F DL + + + S +
Sbjct: 151 L-----FHSITSNIICSIVFG---KRFDYKDPV--FLRLLDLFFQSFSLISSFSSQVFEL 200
Query: 241 IKRLLNI--GSEKQLKGAINLVNE-LAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY-- 295
L G+ +Q+ + +N + +++ R + S D + ++ ++ DK
Sbjct: 201 FSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDP 260
Query: 296 --------LRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLV 347
L V+S AG +T ++ L F L+ ++P V ++ E ++++ ++
Sbjct: 261 SSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-P 319
Query: 348 SFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRV-TYHPYAMGR 406
+ + ++ Y +A ++E RL + F D G + K T V A+
Sbjct: 320 ALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHD 379
Query: 407 MERIWGPDCLEFKPQRWL-------RNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKS 459
P+ F P +L RN F+P F G R+CLG+ IA E+
Sbjct: 380 PRYFETPNT--FNPGHFLDANGALKRNEGFMP--------FSLGKRICLGEGIARTELFL 429
Query: 460 VALAVVRKFNIRVSDPNQAPRFAPGLTATVRGGLPVMVQER 500
+++ F+I P + P + G +P Q R
Sbjct: 430 FFTTILQNFSIASPVPPEDIDLTPRESGV--GNVPPSYQIR 468
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 161/380 (42%), Gaps = 39/380 (10%)
Query: 124 RGI-FNVDGDSWEFQRKMACFELGSFNIKMYALELVTAEIRSRLIPLLSSAANKDNNI-- 180
+GI F G W+ R++A F LE + + S L +L++ + +I
Sbjct: 92 KGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKIICQEISTLCDMLATHNGQSIDISF 151
Query: 181 ---LDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSPI 237
+ + +V F++ K DPE LN+ + D SK S L P
Sbjct: 152 PVFVAVTNVISLICFNTSYKNG---DPE---LNVIQNYNEGIIDNLSKDSLVD-LVPWLK 204
Query: 238 VWKIKRLLNIGSEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDD----- 292
++ K L + S +++ +L+N++ E + + + D L + + D+
Sbjct: 205 IFPNKTLEKLKSHVKIRN--DLLNKILENYKEKFRSDSITNMLDTLMQAKMNSDNGNAGP 262
Query: 293 --------DKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQ 344
D ++ + AG +T S + L +P+V+ + E D+ + ++
Sbjct: 263 DQDSELLSDNHILTTIGDIFGAGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSR 322
Query: 345 DLVSFEQLRELHYLNAAVYESMRLFP--PVQFDSKFAQEDDILPDGTF-VRKGTRVTYHP 401
++ R L L A + E +RL P P+ K + I G F V KGT V +
Sbjct: 323 TPTISDRNRLL-LLEATIREVLRLRPVAPMLIPHKANVDSSI---GEFAVDKGTEVIINL 378
Query: 402 YAMGRMERIWG-PDCLEFKPQRWLR-NGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKS 459
+A+ E+ W PD +F P+R+L G + Y F AG R C+G+ +A E+
Sbjct: 379 WALHHNEKEWHQPD--QFMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFL 436
Query: 460 VALAVVRKFNIRVSDPNQAP 479
+ ++++F++ V D Q P
Sbjct: 437 IMAWLLQRFDLEVPDDGQLP 456
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 146/371 (39%), Gaps = 44/371 (11%)
Query: 123 GRGIFNVDGDSWEFQRKMACFELGSFNIKMYALELVTAEIRSRLIPLL--SSAANKDNNI 180
G G+ +G+ W R+ + + F + ++E E L+ L S A DN +
Sbjct: 91 GYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTL 150
Query: 181 LDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSPIVWK 240
L F + + IC FG + PV F DL + + + S +
Sbjct: 151 L-----FHSITSNIICSIVFG---KRFDYKDPV--FLRLLDLFFQSFSLISSFSSQVFEL 200
Query: 241 IKRLLNI--GSEKQLKGAINLVNE-LAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY-- 295
L G+ +Q+ + +N + +++ R + S D + ++ ++ DK
Sbjct: 201 FSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDP 260
Query: 296 --------LRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLV 347
L V+S AG +T ++ L F L+ ++P V ++ E ++++ ++
Sbjct: 261 SSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-P 319
Query: 348 SFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRV-TYHPYAMGR 406
+ + ++ Y +A ++E RL + F D G + K T V A+
Sbjct: 320 ALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHD 379
Query: 407 MERIWGPDCLEFKPQRWL-------RNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKS 459
P+ F P +L RN F+P F G R+CLG+ IA E+
Sbjct: 380 PRYFETPNT--FNPGHFLDANGALKRNEGFMP--------FSLGKRICLGEGIARTELFL 429
Query: 460 VALAVVRKFNI 470
+++ F+I
Sbjct: 430 FFTTILQNFSI 440
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 155/401 (38%), Gaps = 46/401 (11%)
Query: 123 GRGIFNVDGDSWEFQRKMACFELGSFNIKMYALELVTAEIRSRLIPLL--SSAANKDNNI 180
G G+ +G+ W R+ + + F + ++E E L+ L S A DN +
Sbjct: 91 GYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTL 150
Query: 181 LDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSPIVWK 240
L F + + IC FG + PV F DL + + + S +
Sbjct: 151 L-----FHSITSNIICSIVFG---KRFDYKDPV--FLRLLDLFFQSFSLISSFSSQVFEL 200
Query: 241 IKRLLNI--GSEKQLKGAINLVNE-LAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY-- 295
L G+ +Q+ + +N + +++ R + S D + ++ ++ DK
Sbjct: 201 FSGFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDP 260
Query: 296 --------LRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLV 347
L V+S AG +T ++ L F L+ ++P V ++ E ++++ ++
Sbjct: 261 SSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-P 319
Query: 348 SFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRV-TYHPYAMGR 406
+ + ++ Y +A ++E RL + F D G + K T V A+
Sbjct: 320 ALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHD 379
Query: 407 MERIWGPDCLEFKPQRWL-------RNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKS 459
P+ F P +L RN F+P F G R+CLG+ IA E+
Sbjct: 380 PRYFETPNT--FNPGHFLDANGALKRNEGFMP--------FSLGKRICLGEGIARTELFL 429
Query: 460 VALAVVRKFNIRVSDPNQAPRFAPGLTATVRGGLPVMVQER 500
+++ F+I P + P + G +P Q R
Sbjct: 430 FFTTILQNFSIASPVPPEDIDLTPRESGV--GNVPPSYQIR 468
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 146/371 (39%), Gaps = 44/371 (11%)
Query: 123 GRGIFNVDGDSWEFQRKMACFELGSFNIKMYALELVTAEIRSRLIPLL--SSAANKDNNI 180
G G+ +G+ W R+ + + F + ++E E L+ L S A DN +
Sbjct: 91 GYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTL 150
Query: 181 LDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSPIVWK 240
L F + + IC FG + PV F DL + + + S +
Sbjct: 151 L-----FHSITSNIICSIVFG---KRFDYKDPV--FLRLLDLFFQSFSLISSFSSQVFEL 200
Query: 241 IKRLLNI--GSEKQLKGAINLVNE-LAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY-- 295
L G+ +Q+ + +N + +++ R + S D + ++ ++ DK
Sbjct: 201 FSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDP 260
Query: 296 --------LRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLV 347
L V+S AG +T ++ L F L+ ++P V ++ E ++++ ++
Sbjct: 261 SSEFHHQNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-P 319
Query: 348 SFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRV-TYHPYAMGR 406
+ + ++ Y +A ++E RL + F D G + K T V A+
Sbjct: 320 ALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHD 379
Query: 407 MERIWGPDCLEFKPQRWL-------RNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKS 459
P+ F P +L RN F+P F G R+CLG+ IA E+
Sbjct: 380 PRYFETPNT--FNPGHFLDANGALKRNEGFMP--------FSLGKRICLGEGIARTELFL 429
Query: 460 VALAVVRKFNI 470
+++ F+I
Sbjct: 430 FFTTILQNFSI 440
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 154/401 (38%), Gaps = 46/401 (11%)
Query: 123 GRGIFNVDGDSWEFQRKMACFELGSFNIKMYALELVTAEIRSRLIPLL--SSAANKDNNI 180
G G+ +G+ W R+ + + F + ++E E L+ L S A DN +
Sbjct: 91 GYGVIFANGERWRALRRFSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGALLDNTL 150
Query: 181 LDLQDVFRRFSFDSICKFSFGLDPECLMLNLPVSKFATAFDLASKLSAERALAPSPIVWK 240
L F + + IC FG + PV F DL + + + S +
Sbjct: 151 L-----FHSITSNIICSIVFG---KRFDYKDPV--FLRLLDLFFQSFSLISSFSSQVFEL 200
Query: 241 IKRLLNI--GSEKQLKGAINLVNE-LAETMIHQRQQMGFSKKNDLLSRFMASIDDDKY-- 295
L G+ +Q+ + +N + +++ R + S D + ++ ++ DK
Sbjct: 201 FSGFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDP 260
Query: 296 --------LRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLV 347
L V+S AG +T ++ L F L+ ++P V ++ E ++++ ++
Sbjct: 261 SSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRP-P 319
Query: 348 SFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRV-TYHPYAMGR 406
+ + ++ Y +A ++E RL + F D G + K T V A+
Sbjct: 320 ALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHD 379
Query: 407 MERIWGPDCLEFKPQRWL-------RNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKS 459
P+ F P +L RN F+P F G R+C G+ IA E+
Sbjct: 380 PRYFETPNT--FNPGHFLDANGALKRNEGFMP--------FSLGKRICAGEGIARTELFL 429
Query: 460 VALAVVRKFNIRVSDPNQAPRFAPGLTATVRGGLPVMVQER 500
+++ F+I P + P + G +P Q R
Sbjct: 430 FFTTILQNFSIASPVPPEDIDLTPRESGV--GNVPPSYQIR 468
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 36/249 (14%)
Query: 253 LKGAINLVNELAETMIHQRQQMGFSKK---------NDLLSRFMASIDDDKYLRDIVVSF 303
+ A N +LAE++ H+ Q S ND LS F DD + + +V
Sbjct: 211 FRTAHNAREKLAESLRHENLQKRESISELISLRMFLNDTLSTF----DDLEKAKTHLVVL 266
Query: 304 LLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFE---------QLRE 354
+ +T+ + S F ++ ++PE A E + ++ VS E +L +
Sbjct: 267 WASQANTIPATFWSLFQMI-RNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELND 325
Query: 355 LHYLNAAVYESMRLFPPVQFDSKFAQEDDIL--PDGTF-VRKGTRVTYHPYAMGRMERIW 411
L L++ + ES+RL + + A+ED L DG++ +RK + +P M I+
Sbjct: 326 LPVLDSIIKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY 384
Query: 412 GPDCLEFKPQRWL-RNGRFVP-------ENPFKYPVFQAGHRVCLGKDIALVEMKSVALA 463
PD L FK R+L NG+ + + Y F +G +C G+ A+ E+K +
Sbjct: 385 -PDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLIL 443
Query: 464 VVRKFNIRV 472
++ F + +
Sbjct: 444 MLSYFELEL 452
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 110/249 (44%), Gaps = 36/249 (14%)
Query: 253 LKGAINLVNELAETMIHQRQQMGFSKK---------NDLLSRFMASIDDDKYLRDIVVSF 303
+ A N +LAE++ H+ Q S ND LS F DD + + +V
Sbjct: 211 FRTAHNAREKLAESLRHENLQKRESISELISLRMFLNDTLSTF----DDLEKAKTHLVVL 266
Query: 304 LLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFE---------QLRE 354
+ +T+ + S F ++ ++PE A E + ++ VS E +L +
Sbjct: 267 WASQANTIPATFWSLFQMI-RNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELND 325
Query: 355 LHYLNAAVYESMRLFPPVQFDSKFAQEDDIL--PDGTF-VRKGTRVTYHPYAMGRMERIW 411
L L++ + ES+RL + + A+ED L DG++ +RK + +P M I+
Sbjct: 326 LPVLDSIIKESLRL-SSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIY 384
Query: 412 GPDCLEFKPQRWL-RNGRFVP-------ENPFKYPVFQAGHRVCLGKDIALVEMKSVALA 463
PD L FK R+L NG+ + + Y F +G +C G+ A+ E+K +
Sbjct: 385 -PDPLTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLIL 443
Query: 464 VVRKFNIRV 472
++ F + +
Sbjct: 444 MLSYFELEL 452
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Query: 304 LLAGR-DTVASGLTSFFWLLSQHPEVESAIRNES----DKIMKPNQDLVSFEQLRELHYL 358
L AG DT A L + L+++P+V+ +R ES I + Q + EL L
Sbjct: 285 LTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATT-----ELPLL 339
Query: 359 NAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEF 418
AA+ E++RL+P F + D +L + GT V Y++GR ++ P +
Sbjct: 340 RAALKETLRLYPVGLFLERVVSSDLVL-QNYHIPAGTLVQVFLYSLGRNAALF-PRPERY 397
Query: 419 KPQRWLR---NGRFVPENPFKYPVFQAGHRVCLGK 450
PQRWL +GR PF + G R CLG+
Sbjct: 398 NPQRWLDIRGSGRNFHHVPFGF-----GMRQCLGR 427
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 293 DKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQL 352
D+ + +IV+ AG DTV + ++ L +P V+ I+ E D ++ ++
Sbjct: 277 DEKIINIVLDLFGAGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRR-PRLSDR 335
Query: 353 RELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWG 412
L Y+ A + E+ R V F + D G ++ KG V + + + +++W
Sbjct: 336 SHLPYMEAFILETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLW- 394
Query: 413 PDCLEFKPQRWLR-NGRFVPENPFKYPVFQAGHRVCLGKDIALVEM 457
+ EF P+R+L +G K +F G R C+G+ IA E+
Sbjct: 395 VNPSEFLPERFLTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEV 440
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 93/186 (50%), Gaps = 10/186 (5%)
Query: 306 AGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYES 365
A +DT+++ L L +++P+V++ ++ E D+++ ++ L L Y+ A +YE+
Sbjct: 290 ASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDR-LPCMGDQPNLPYVLAFLYEA 348
Query: 366 MRL--FPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQRW 423
MR F PV +L G + K T V + +++ W P+ F P R+
Sbjct: 349 MRFSSFVPVTIPHATTANTSVL--GYHIPKDTVVFVNQWSVNHDPLKW-PNPENFDPARF 405
Query: 424 L-RNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVSDPNQAPR-- 480
L ++G + + +F G R C+G++++ +++ + + + R ++PN+ +
Sbjct: 406 LDKDGLINKDLTSRVMIFSVGKRRCIGEELSKMQLFLFISILAHQCDFR-ANPNEPAKMN 464
Query: 481 FAPGLT 486
F+ GLT
Sbjct: 465 FSYGLT 470
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 21/188 (11%)
Query: 296 LRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLREL 355
L V +AG +T ++ L LL +HPEV + ++ E D ++ ++ + +
Sbjct: 269 LVGTVADLFVAGTETTSTTLRYGLLLLLKHPEVTAKVQEEIDHVIGRHRS-PCMQDRSHM 327
Query: 356 HYLNAAVYESMR---LFP-----PVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRM 407
Y +A V+E R L P V D+KF + ++P GT + H
Sbjct: 328 PYTDAVVHEIQRYSDLVPTGVPHAVTTDTKF--RNYLIPKGTTIMALLTSVLH------- 378
Query: 408 ERIWGPDCLEFKPQRWL-RNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVR 466
+ P+ F P +L +NG F + F F AG R+C G+ +A +E+ +++
Sbjct: 379 DDKEFPNPNIFDPGHFLDKNGNFKKSDYFM--PFSAGKRICAGEGLARMELFLFLTTILQ 436
Query: 467 KFNIRVSD 474
FN++ D
Sbjct: 437 NFNLKSVD 444
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 7/175 (4%)
Query: 300 VVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLN 359
+ L G +T + L + +++ V+ +R E + + +S + L+ + L
Sbjct: 281 ITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQAEGDIS-KMLQMVPLLK 339
Query: 360 AAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWG-PDCLEF 418
A++ E++RL P ++ + D +L D + T V YAMGR + PD +F
Sbjct: 340 ASIKETLRLHPISVTLQRYPESDLVLQD-YLIPAKTLVQVAIYAMGRDPAFFSSPD--KF 396
Query: 419 KPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFNIRVS 473
P RWL + + F+ F G R C+G+ IA +EM + ++ F + +
Sbjct: 397 DPTRWLSKDKDLIH--FRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEMQ 449
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 88/213 (41%), Gaps = 44/213 (20%)
Query: 254 KGAINLVNELA--ETMIHQRQQMGFSKKNDLLSRFMASIDDDKYLRDIVVS----FLLAG 307
+G I V +A + +I +R++ + D++S + + DK + S +AG
Sbjct: 179 EGNIMAVQAMAYFKELIQKRKR---HPQQDMISMLLKGREKDKLTEEEAASTCILLAIAG 235
Query: 308 RDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMR 367
+T + +++ L QHPE +R N DL+ AV E +R
Sbjct: 236 HETTVNLISNSVLCLLQHPEQLLKLRE--------NPDLI-----------GTAVEECLR 276
Query: 368 LFPPVQFDSKFAQED-DILPDGTFVRKGTRVTYHPYAMGRMERIW-GPDCLEFKPQRWLR 425
P Q ++ A ED DI G +R+G +V A R I+ PD +
Sbjct: 277 YESPTQMTARVASEDIDIC--GVTIRQGEQVYLLLGAANRDPSIFTNPDVFD-------- 326
Query: 426 NGRFVPENPFKYPVFQAGHRVCLGKDIALVEMK 458
+ +P + F GH VCLG +A +E +
Sbjct: 327 ----ITRSPNPHLSFGHGHHVCLGSSLARLEAQ 355
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 70/162 (43%), Gaps = 4/162 (2%)
Query: 298 DIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHY 357
++V AG DTV + ++ L PE++ I+ E D ++ + +L Y
Sbjct: 285 NLVNDIFGAGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIG-RERRPRLSDRPQLPY 343
Query: 358 LNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLE 417
L A + E+ R + F + D +G ++ K V + + + +W D E
Sbjct: 344 LEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELW-EDPSE 402
Query: 418 FKPQRWLRNGRFVPENPF--KYPVFQAGHRVCLGKDIALVEM 457
F+P+R+L P K +F G R C+G+ +A E+
Sbjct: 403 FRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEI 444
>pdb|1LFK|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LG9|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
pdb|1LGF|A Chain A, Crystal Structure Of Oxyb, A Cytochrome P450 Implicated In
An Oxidative Phenol Coupling Reaction During Vancomycin
Biosynthesis
Length = 398
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 79/206 (38%), Gaps = 33/206 (16%)
Query: 293 DKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQL 352
D+ LR V +LAG D ++ + + +HPE A R + + +L+ +
Sbjct: 223 DEELRGFCVQVMLAGDDNISGMIGLGVLAMLRHPEQIDAFRGDEQSAQRAVDELIRY--- 279
Query: 353 RELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWG 412
L P + A+ED L G ++KG V A R +
Sbjct: 280 ---------------LTVPYSPTPRIAREDLTLA-GQEIKKGDSVICSLPAANR-DPALA 322
Query: 413 PDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKF-NIR 471
PD V P + F G CLG +A +E+++V + R+F +R
Sbjct: 323 PDVDRLD----------VTREPIPHVAFGHGVHHCLGAALARLELRTVFTELWRRFPALR 372
Query: 472 VSDPNQAPRFAPGLTATVRGGLPVMV 497
++DP Q F LT G +MV
Sbjct: 373 LADPAQDTEFR--LTTPAYGLTELMV 396
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 36/216 (16%)
Query: 272 QQMGFSKKNDLLSRFMASID-----DDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHP 326
Q+ + +DL+S + + D DD +L + + L+A DT A + LL P
Sbjct: 198 QERRANPGDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSP 257
Query: 327 EVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILP 386
+ + +R + + AV E +R QF + D+
Sbjct: 258 DQLALLREDPS-------------------LVGNAVEELLRYLTIGQFGGERVATRDVEL 298
Query: 387 DGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRV 446
G + KG +V H A + P +E +P+R+ R P F + Q
Sbjct: 299 GGVRIAKGEQVVAHVLAAD-----FDPAFVE-EPERFDITRRPAPHLAFGFGAHQ----- 347
Query: 447 CLGKDIALVEMKSVALAVVRKF-NIRVSDPNQAPRF 481
C+G+ +A +E++ V + R+ +R++ P + RF
Sbjct: 348 CIGQQLARIELQIVFETLFRRLPGLRLAKPVEELRF 383
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 36/216 (16%)
Query: 272 QQMGFSKKNDLLSRFMASID-----DDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHP 326
Q+ + +DL+S + + D DD +L + + L+A DT A + LL P
Sbjct: 198 QERRANPGDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSP 257
Query: 327 EVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILP 386
+ + +R + + AV E +R QF + D+
Sbjct: 258 DQLALLREDPSLV-------------------GNAVEELLRYLTIGQFGGERVATRDVEL 298
Query: 387 DGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRV 446
G + KG +V H A + P +E +P+R+ R P F + Q
Sbjct: 299 GGVRIAKGEQVVAHVLAAD-----FDPAFVE-EPERFDITRRPAPHLAFGFGAHQ----- 347
Query: 447 CLGKDIALVEMKSVALAVVRKF-NIRVSDPNQAPRF 481
C+G+ +A +E++ V + R+ +R++ P + RF
Sbjct: 348 CIGQQLARIELQIVFETLFRRLPGLRLAKPVEELRF 383
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 87/216 (40%), Gaps = 36/216 (16%)
Query: 272 QQMGFSKKNDLLSRFMASID-----DDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHP 326
Q+ + +DL+S + + D DD +L + + L+A DT A + LL P
Sbjct: 198 QERRANPGDDLISALITTEDPDGVVDDMFLMNAAGTLLIAAHDTTACMIGLGTALLLDSP 257
Query: 327 EVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILP 386
+ + +R + + AV E +R QF + D+
Sbjct: 258 DQLALLREDPS-------------------LVGNAVEELLRYLTIGQFGGERVATRDVEL 298
Query: 387 DGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRV 446
G + KG +V H A + P +E +P+R+ R P F + Q
Sbjct: 299 GGVRIAKGEQVVAHVLAAD-----FDPAFVE-EPERFDITRRPAPHLAFGFGAHQ----- 347
Query: 447 CLGKDIALVEMKSVALAVVRKF-NIRVSDPNQAPRF 481
C+G+ +A +E++ V + R+ +R++ P + RF
Sbjct: 348 CIGQQLARIELQIVFETLFRRLPGLRLAKPVEELRF 383
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 319 FWLLS---QHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFD 375
FW++ HPE A+R E ++ + L E+ + ++ ++E++RL
Sbjct: 274 FWVMGYLLTHPEALRAVREE----IQGGKHLRLEERQKNTPVFDSVLWETLRLTAAALIT 329
Query: 376 SKFAQEDDI-LPDGT--FVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQRWLRNGRFVPE 432
Q+ I L +G +R+G R+ P+ +M+ F+ R+L R +
Sbjct: 330 RDVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKK 389
Query: 433 NPFK------YPVFQAGHR--VCLGKDIALVEMKSVALAVVRKFNIRVSDPN 476
+ FK YP G +C G+ A+ +K + ++ +F++ + D N
Sbjct: 390 DFFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFDVELCDKN 441
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 110/299 (36%), Gaps = 51/299 (17%)
Query: 178 NNILDLQDVFRRFSFDSICKFSFGLDP--ECLMLNLPVSKFATAFDLASKLSAERALAPS 235
+ + L D + FD + F+ L C +L P+ + D +LS E L
Sbjct: 123 STVEQLIDKLPQGDFDFVQHFAHPLPALVMCQLLGFPLEDY----DTVGRLSIETNLG-- 176
Query: 236 PIVWKIKRLLNIGSEKQL-----KGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASI 290
L + +++ + +G + + L + ++ + G +D++ F +
Sbjct: 177 ---------LALSNDQDILVKVEQGLGRMFDYLVAAIEKRKVEPGDDLTSDIVRAFHDGV 227
Query: 291 DDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFE 350
DD LR +V + L+AG +T L + +QHP+ I+ + + P
Sbjct: 228 LDDYELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPE--LAPQ------- 278
Query: 351 QLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERI 410
AV E +R P + + +D +G + GT V + R R+
Sbjct: 279 ----------AVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRV 328
Query: 411 WGPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
+ D F + R P F G CLG +A +E+ A+ + +
Sbjct: 329 FA-DADRFD----ITVKREAPSI-----AFGGGPHFCLGTALARLELTEAVAALATRLD 377
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 100/265 (37%), Gaps = 41/265 (15%)
Query: 206 CLMLNLPVSKFATAFDLASKLSAERALA-PSPIVWKIKRLLNIGSEKQLKGAINLVNELA 264
C +L P+ + T L+ + + AL+ I+ K++ +G + + L
Sbjct: 163 CQLLGFPLEDYDTVGRLSIETNLGLALSNDQDILVKVE-----------QGLGRMFDYLV 211
Query: 265 ETMIHQRQQMGFSKKNDLLSRFMASIDDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQ 324
+ ++ + G +D++ F + DD LR +V + L+AG +T L + +Q
Sbjct: 212 AAIEKRKVEPGDDLTSDIVRAFHDGVLDDYELRTLVATVLVAGYETTNHQLALAMYDFAQ 271
Query: 325 HPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDI 384
HP+ I+ + + P AV E +R P + + +D
Sbjct: 272 HPDQWMKIKENPE--LAPQ-----------------AVEEVLRWSPTLPVTATRVAAEDF 312
Query: 385 LPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGH 444
+G + GT V + R R++ D F + R P F G
Sbjct: 313 EVNGVRIPTGTPVFMCAHVAHRDPRVFA-DADRFD----ITVKREAPSI-----AFGGGP 362
Query: 445 RVCLGKDIALVEMKSVALAVVRKFN 469
CLG +A +E+ A+ + +
Sbjct: 363 HFCLGTALARLELTEAVAALATRLD 387
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 73/186 (39%), Gaps = 41/186 (22%)
Query: 280 NDLLSRFMA--------SIDDDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESA 331
+DL SR ++ ++D+ R + + L G DTVA+ + L++HPE +
Sbjct: 203 DDLFSRILSEPVGGRPWTVDE---ARRMCRNLLFGGLDTVAAMIGMVALHLARHPEDQRL 259
Query: 332 IRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFV 391
+R D I AA E MR +P V D+ DG +
Sbjct: 260 LRERPDLI-------------------PAAADELMRRYPTVAVSRNAVA--DVDADGVTI 298
Query: 392 RKGTRVTYHPYAMGRMERIWGPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKD 451
RKG V Y P + + D F+ +R R + P ++ G C+G
Sbjct: 299 RKGDLV-YLPSVLHNL------DPASFEAPEEVRFDRGL--APIRHTTMGVGAHRCVGAG 349
Query: 452 IALVEM 457
+A +E+
Sbjct: 350 LARMEV 355
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 33/168 (19%)
Query: 292 DDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQ 351
DDKY+ V+ AG DT +S LS++PE + + SD + P
Sbjct: 253 DDKYINAYYVAIATAGHDTTSSSSGGAIIGLSRNPEQLALAK--SDPALIPR-------- 302
Query: 352 LRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIW 411
V E++R PV+ + A D + G +++G R+ + R E ++
Sbjct: 303 ---------LVDEAVRWTAPVKSFMRTALADTEV-RGQNIKRGDRIMLSYPSANRDEEVF 352
Query: 412 G-PDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMK 458
PD EF R+ P ++ F G +CLG+ +A +EMK
Sbjct: 353 SNPD--EFDITRF----------PNRHLGFGWGAHMCLGQHLAKLEMK 388
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 32/159 (20%)
Query: 327 EVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPV-----QFDSKFAQE 381
E+ AI++ D V+ E + ++ + VYES+R+ PPV + S F E
Sbjct: 306 EIRGAIKSYGD-------GNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIE 358
Query: 382 DDILPDGTF-VRKGTRV-TYHPYAMGRMERIWGPDCLEFKPQRWLRNGRFVPENPFKYPV 439
D TF V+KG + Y P+A + P+ E+ P R++ +G E KY
Sbjct: 359 SH---DATFEVKKGEMLFGYQPFATKDPKVFDRPE--EYVPDRFVGDG----EALLKYVW 409
Query: 440 FQAG---------HRVCLGKDIALVEMKSVALAVVRKFN 469
+ G ++ C GKD ++ + + + R+++
Sbjct: 410 WSNGPETESPTVENKQCAGKDFVVLITRLFVIELFRRYD 448
>pdb|3CV8|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84f Mutant)
Length = 412
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 80/206 (38%), Gaps = 33/206 (16%)
Query: 292 DDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQ 351
D + L + L+AG +T AS + L HPE +A+R +D+ + P
Sbjct: 230 DREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALR--ADRSLVPG-------- 279
Query: 352 LRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIW 411
AV E +R DI +G +R G V R ++
Sbjct: 280 ---------AVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVY 330
Query: 412 -GPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKF-N 469
PD L+ R+ R + F G CLG+++A +E++ + A++ +
Sbjct: 331 EDPDALDIH-----RSAR-------HHLAFGFGVHQCLGQNLARLELEVILNALMDRVPT 378
Query: 470 IRVSDPNQAPRFAPGLTATVRGGLPV 495
+R++ P + PG T LPV
Sbjct: 379 LRLAVPVEQLVLRPGTTIQGVNELPV 404
>pdb|3CV9|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R73aR84A MUTANT) IN COMPLEX WITH 1ALPHA,25-
Dihydroxyvitamin D3
Length = 412
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 80/206 (38%), Gaps = 33/206 (16%)
Query: 292 DDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQ 351
D + L + L+AG +T AS + L HPE +A+R +D+ + P
Sbjct: 230 DREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALR--ADRSLVPG-------- 279
Query: 352 LRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIW 411
AV E +R DI +G +R G V R ++
Sbjct: 280 ---------AVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVY 330
Query: 412 -GPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKF-N 469
PD L+ R+ R + F G CLG+++A +E++ + A++ +
Sbjct: 331 EDPDALDIH-----RSAR-------HHLAFGFGVHQCLGQNLARLELEVILNALMDRVPT 378
Query: 470 IRVSDPNQAPRFAPGLTATVRGGLPV 495
+R++ P + PG T LPV
Sbjct: 379 LRLAVPVEQLVLRPGTTIQGVNELPV 404
>pdb|2ZBX|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (Wild Type) With Imidazole Bound
Length = 412
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 80/206 (38%), Gaps = 33/206 (16%)
Query: 292 DDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQ 351
D + L + L+AG +T AS + L HPE +A+R +D+ + P
Sbjct: 230 DREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALR--ADRSLVPG-------- 279
Query: 352 LRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIW 411
AV E +R DI +G +R G V R ++
Sbjct: 280 ---------AVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVY 330
Query: 412 -GPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVV-RKFN 469
PD L+ R+ R + F G CLG+++A +E++ + A++ R
Sbjct: 331 EDPDALDIH-----RSAR-------HHLAFGFGVHQCLGQNLARLELEVILNALMDRVPT 378
Query: 470 IRVSDPNQAPRFAPGLTATVRGGLPV 495
+R++ P + PG T LPV
Sbjct: 379 LRLAVPVEQLVLRPGTTIQGVNELPV 404
>pdb|2ZBY|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant)
pdb|2ZBZ|A Chain A, Crystal Structure Of Vitamin D Hydroxylase Cytochrome P450
105a1 (R84a Mutant) In Complex With
1,25-Dihydroxyvitamin D3
Length = 412
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 80/206 (38%), Gaps = 33/206 (16%)
Query: 292 DDKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQ 351
D + L + L+AG +T AS + L HPE +A+R +D+ + P
Sbjct: 230 DREELISTAMLLLIAGHETTASMTSLSVITLLDHPEQYAALR--ADRSLVPG-------- 279
Query: 352 LRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIW 411
AV E +R DI +G +R G V R ++
Sbjct: 280 ---------AVEELLRYLAIADIAGGRVATADIEVEGQLIRAGEGVIVVNSIANRDGTVY 330
Query: 412 -GPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKF-N 469
PD L+ R+ R + F G CLG+++A +E++ + A++ +
Sbjct: 331 EDPDALDIH-----RSAR-------HHLAFGFGVHQCLGQNLARLELEVILNALMDRVPT 378
Query: 470 IRVSDPNQAPRFAPGLTATVRGGLPV 495
+R++ P + PG T LPV
Sbjct: 379 LRLAVPVEQLVLRPGTTIQGVNELPV 404
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 88/213 (41%), Gaps = 37/213 (17%)
Query: 280 NDLLSRFMASIDD-----DKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRN 334
+DL+S + + D ++ L D+ + L+AG ++ + + F +LL PE+ + +
Sbjct: 223 DDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLD 282
Query: 335 ESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKG 394
+ I ++L + L + AV ++A ED L G +R G
Sbjct: 283 RPELIPSAVEELTRWVPL----GVGTAV-------------PRYAVEDVTL-RGVTIRAG 324
Query: 395 TRVTYHPYAMGRMERIWGPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIAL 454
V A R ++ PD R P ++ F G CLG +A
Sbjct: 325 EPVLASTGAANR-DQAQFPDADRIDVDR----------TPNQHLGFGHGVHHCLGAPLAR 373
Query: 455 VEMKSVALAVV--RKFNIRVSDPNQAPRFAPGL 485
VE++ VAL V+ R IR+ P R++ G+
Sbjct: 374 VELQ-VALEVLLQRLPGIRLGIPETQLRWSEGM 405
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 93/226 (41%), Gaps = 41/226 (18%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDK------YLRDIVVS 302
+E++ + A +VN + + + +R + G +DLLS + DDD L I +
Sbjct: 182 AEQRGQAAREVVNFILDLVERRRTEPG----DDLLSALIRVQDDDDGRLSADELTSIALV 237
Query: 303 FLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAV 362
LLAG +T S + +LL HP+ + +R + + PN AV
Sbjct: 238 LLLAGFETSVSLIGIGTYLLLTHPDQLALVRRDPSAL--PN-----------------AV 278
Query: 363 YESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQR 422
E +R P + ++FA E ++ G + + + V A R + + PD F R
Sbjct: 279 EEILRYIAPPETTTRFAAE-EVEIGGVAIPQYSTVLVANGAANRDPKQF-PDPHRFDVTR 336
Query: 423 WLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKF 468
R + F G C+G+ +A +E + A+ +F
Sbjct: 337 DTRG----------HLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 349 FEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRME 408
++++RE + A+ E++R PPV + +E L D T + +G V + R E
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQT-IEEGEYVRVWIASANRDE 289
Query: 409 RIWGPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKF 468
++ D +F P R NP + F +G +CLG +A +E + ++F
Sbjct: 290 EVFH-DGEKFIPDR----------NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRF 338
Query: 469 -NIRVSDPNQAP 479
+I + D + P
Sbjct: 339 RHIEILDTEKVP 350
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 89/213 (41%), Gaps = 37/213 (17%)
Query: 280 NDLLSRFMASIDD-----DKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRN 334
+DL+S + + D ++ L D+ + L+AG ++ + + F +LL PE+ + +
Sbjct: 223 DDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLD 282
Query: 335 ESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKG 394
+ I ++L + L + A FP ++A ED L G +R G
Sbjct: 283 RPELIPSAVEELTRWVPL----GVGTA-------FP------RYAVEDVTL-RGVTIRAG 324
Query: 395 TRVTYHPYAMGRMERIWGPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIAL 454
V A R ++ PD R P ++ F G CLG +A
Sbjct: 325 EPVLASTGAANR-DQAQFPDADRIDVDR----------TPNQHLGFGHGVHHCLGAPLAR 373
Query: 455 VEMKSVALAVV--RKFNIRVSDPNQAPRFAPGL 485
VE++ VAL V+ R IR+ P R++ G+
Sbjct: 374 VELQ-VALEVLLQRLPGIRLGIPETQLRWSEGM 405
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 13/132 (9%)
Query: 349 FEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRME 408
++++RE + A+ E++R PPV + +E L D T + +G V + R E
Sbjct: 231 WQRIREENLYLKAIEEALRYSPPVMRTVRKTKERVKLGDQT-IEEGEYVRVWIASANRDE 289
Query: 409 RIWGPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKF 468
++ D +F P R NP + F +G +CLG +A +E + ++F
Sbjct: 290 EVFH-DGEKFIPDR----------NPNPHLSFGSGIHLCLGAPLARLEARIAIEEFSKRF 338
Query: 469 -NIRVSDPNQAP 479
+I + D + P
Sbjct: 339 RHIEILDTEKVP 350
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 41/226 (18%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDK------YLRDIVVS 302
+E++ + A +VN + + + +R + G +DLLS + DDD L I +
Sbjct: 181 AEQRGQAAREVVNFILDLVERRRTEPG----DDLLSALIRVQDDDDGRLSADELTSIALV 236
Query: 303 FLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAV 362
LLAG ++ S + +LL HP+ + +R + + PN AV
Sbjct: 237 LLLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSAL--PN-----------------AV 277
Query: 363 YESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQR 422
E +R P + ++FA E ++ G + + + V A R + + PD F R
Sbjct: 278 EEILRYIAPPETTTRFAAE-EVEIGGVAIPQYSTVLVANGAANRDPKQF-PDPHRFDVTR 335
Query: 423 WLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKF 468
R + F G C+G+ +A +E + A+ +F
Sbjct: 336 DTRG----------HLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 93/226 (41%), Gaps = 41/226 (18%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDK------YLRDIVVS 302
+E++ + A +VN + + + +R + G +DLLS + DDD L I +
Sbjct: 182 AEQRGQAAREVVNFILDLVERRRTEPG----DDLLSALIRVQDDDDGRLSADELTSIALV 237
Query: 303 FLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAV 362
LLAG ++ S + +LL HP+ + +R + + PN AV
Sbjct: 238 LLLAGFESSVSLIGIGTYLLLTHPDQLALVRRDPSAL--PN-----------------AV 278
Query: 363 YESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQR 422
E +R P + ++FA E ++ G + + + V A R + + PD F R
Sbjct: 279 EEILRYIAPPETTTRFAAE-EVEIGGVAIPQYSTVLVANGAANRDPKQF-PDPHRFDVTR 336
Query: 423 WLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKF 468
R + F G C+G+ +A +E + A+ +F
Sbjct: 337 DTRG----------HLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 37/213 (17%)
Query: 280 NDLLSRFMASIDD-----DKYLRDIVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRN 334
+DL+S + + D ++ L D+ + L+AG ++ + + F +LL PE+ + +
Sbjct: 223 DDLVSALVQARDQQDSLSEQELLDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLD 282
Query: 335 ESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKG 394
+ I ++L + L + A ++A ED L G +R G
Sbjct: 283 RPELIPSAVEELTRWVPL----GVGTAA-------------PRYAVEDVTL-RGVTIRAG 324
Query: 395 TRVTYHPYAMGRMERIWGPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIAL 454
V A R ++ PD R P ++ F G CLG +A
Sbjct: 325 EPVLASTGAANR-DQAQFPDADRIDVDR----------TPNQHLGFGHGVHHCLGAPLAR 373
Query: 455 VEMKSVALAVV--RKFNIRVSDPNQAPRFAPGL 485
VE++ VAL V+ R IR+ P R++ G+
Sbjct: 374 VELQ-VALEVLLQRLPGIRLGIPETQLRWSEGM 405
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 29/140 (20%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDK------YLRDIVVS 302
+E++ + A +VN + + + +R + G +DLLS ++ DDD L I +
Sbjct: 181 AEQRGQAAREVVNFILDLVERRRTEPG----DDLLSALISVQDDDDGRLSADELTSIALV 236
Query: 303 FLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAV 362
LLAG + S + +LL HP+ + +R +D PN AV
Sbjct: 237 LLLAGFEASVSLIGIGTYLLLTHPDQLALVR--ADPSALPN-----------------AV 277
Query: 363 YESMRLFPPVQFDSKFAQED 382
E +R P + ++FA E+
Sbjct: 278 EEILRYIAPPETTTRFAAEE 297
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 92/226 (40%), Gaps = 41/226 (18%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDK------YLRDIVVS 302
+E++ + A +VN + + + +R + G +DLLS + DDD L I +
Sbjct: 182 AEQRGQAAREVVNFILDLVERRRTEPG----DDLLSALIRVQDDDDGRLSADELTSIALV 237
Query: 303 FLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAV 362
LLAG + S + +LL HP+ + +R + + PN AV
Sbjct: 238 LLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSAL--PN-----------------AV 278
Query: 363 YESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQR 422
E +R P + ++FA E ++ G + + + V A R + + PD F R
Sbjct: 279 EEILRYIAPPETTTRFAAE-EVEIGGVAIPQYSTVLVANGAANRDPKQF-PDPHRFDVTR 336
Query: 423 WLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKF 468
R + F G C+G+ +A +E + A+ +F
Sbjct: 337 DTRG----------HLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 372
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 92/226 (40%), Gaps = 41/226 (18%)
Query: 249 SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDK------YLRDIVVS 302
+E++ + A +VN + + + +R + G +DLLS + DDD L I +
Sbjct: 181 AEQRGQAAREVVNFILDLVERRRTEPG----DDLLSALIRVQDDDDGRLSADELTSIALV 236
Query: 303 FLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAV 362
LLAG + S + +LL HP+ + +R + + PN AV
Sbjct: 237 LLLAGFEASVSLIGIGTYLLLTHPDQLALVRRDPSAL--PN-----------------AV 277
Query: 363 YESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWGPDCLEFKPQR 422
E +R P + ++FA E ++ G + + + V A R + + PD F R
Sbjct: 278 EEILRYIAPPETTTRFAAE-EVEIGGVAIPQYSTVLVANGAANRDPKQF-PDPHRFDVTR 335
Query: 423 WLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKF 468
R + F G C+G+ +A +E + A+ +F
Sbjct: 336 DTRG----------HLSFGQGIHFCMGRPLAKLEGEVALRALFGRF 371
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 92/226 (40%), Gaps = 44/226 (19%)
Query: 250 EKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDD-DKYLRDIVVS----FL 304
++Q+K + L + L + +R+ G DL+S +A + D+ D +++ L
Sbjct: 199 DEQMKAGMWLRDYLRALIDERRRTPG----EDLMSGLVAVEESGDQLTEDEIIATCNLLL 254
Query: 305 LAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYE 364
+AG +T + + + + + P +A+ + + +A + E
Sbjct: 255 IAGHETTVNLIANAALAMLRTPGQWAALAADGSRA-------------------SAVIEE 295
Query: 365 SMRLFPPVQFDSKFAQEDDILPDGTF-VRKGTRVTYHPYAMGRMERIWG-PDCLEFKPQR 422
+MR PPVQ S++A +D L GT V KG + A R I G PD F P R
Sbjct: 296 TMRYDPPVQLVSRYAGDD--LTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPD--RFDPDR 351
Query: 423 WLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKF 468
++ F G CLG +A +E A+ +F
Sbjct: 352 AQ----------IRHLGFGKGAHFCLGAPLARLEATVALPALAARF 387
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 327 EVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILP 386
+V + + E ++K N ++ + ++ + VYE +R PPV A++D ++
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIE 375
Query: 387 --DGTFVRKGTRV--TYHPYAMGRMERIWGPDCLEFKPQRWLRNG------RFVPENPFK 436
D F K + Y P A R +I+ EF P+R++ + N +
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLAT-RDPKIFD-RADEFVPERFVGEEGEKLLRHVLWSNGPE 433
Query: 437 YPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
G++ C GKD ++ + + + R+++
Sbjct: 434 TETPTVGNKQCAGKDFVVLVARLFVIEIFRRYD 466
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 12/153 (7%)
Query: 327 EVESAIRNESDKIMKPNQDLVSFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQEDDILP 386
+V + + E ++K N ++ + ++ + VYE +R PPV A++D ++
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIE 375
Query: 387 --DGTFVRKGTRV--TYHPYAMGRMERIWGPDCLEFKPQRWLRNG------RFVPENPFK 436
D F K + Y P A R +I+ EF P+R++ + N +
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLAT-RDPKIFD-RADEFVPERFVGEEGEKLLRHVLWSNGPE 433
Query: 437 YPVFQAGHRVCLGKDIALVEMKSVALAVVRKFN 469
G++ C GKD ++ + + + R+++
Sbjct: 434 TETPTVGNKQCAGKDFVVLVARLFVIEIFRRYD 466
>pdb|1UUL|A Chain A, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|B Chain B, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|C Chain C, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|D Chain D, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|E Chain E, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|F Chain F, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|G Chain G, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|H Chain H, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|I Chain I, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
pdb|1UUL|J Chain J, Tryparedoxin Peroxidase (Txnpx) From Trypanosoma Cruzi In
The Reduced State
Length = 202
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 272 QQMGFSKKNDLLS-RFMASIDDDKYLRDIVVSFLLAGRDT-VASGLTSFFWLLSQHPEVE 329
+ G K+ D ++ R + ID + LR I V+ L GRD A L F + +H EV
Sbjct: 114 KSYGVLKEEDGVAYRGLFIIDPKQNLRQITVNDLPVGRDVDEALRLVKAFQFVEKHGEVC 173
Query: 330 SAIRNESDKIMKPNQD 345
A DK MKP+ +
Sbjct: 174 PANWKPGDKTMKPDPE 189
>pdb|2YOO|A Chain A, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|B Chain B, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|C Chain C, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|2YOO|D Chain D, Cholest-4-en-3-one Bound Structure Of Cyp142 From
Mycobacterium Smegmatis
pdb|3ZBY|A Chain A, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|B Chain B, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|C Chain C, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|D Chain D, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|E Chain E, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
pdb|3ZBY|F Chain F, Ligand-free Structure Of Cyp142 From Mycobacterium
Smegmatis
Length = 407
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 15/128 (11%)
Query: 354 ELHYLNAAVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWG- 412
++ L A+ E +R PV+ + D + GT +R G ++ + E ++G
Sbjct: 262 DVDLLPGAIEEMLRWTSPVKNMCRTLTADTVF-HGTELRAGEKIMLMFESANFDESVFGD 320
Query: 413 PDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVALAVVRKF-NIR 471
PD F+ R NP + F G CLG +A +E++ + V+R+ ++R
Sbjct: 321 PD--NFRIDR----------NPNSHVAFGFGTHFCLGNQLARLELRLMTERVLRRLPDLR 368
Query: 472 VSDPNQAP 479
++D P
Sbjct: 369 LADDAPVP 376
>pdb|2X9P|A Chain A, X-Ray Structure Of The Substrate-Free Cytochrome P450 Pimd
- A Polyene Macrolide Antibiotic Pimaricin Epoxidase
pdb|2XBK|A Chain A, X-Ray Structure Of The Substrate-Bound Cytochrome P450
Pimd - A Polyene Macrolide Antibiotic Pimaricin
Epoxidase
Length = 404
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 250 EKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKYLRDIVVSFLLAGRD 309
E ++ +L +A + H+R + G D++SR + + + + L AG D
Sbjct: 189 EGAVRAQDDLFGYVAGLVEHKRAEPG----PDIISRLNDGELTEDRVAHLAMGLLFAGLD 244
Query: 310 TVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLV 347
+VAS + + LL+ HP+ +A + D + + ++++
Sbjct: 245 SVASIMDNGVVLLAAHPDQRAAALADPDVMARAVEEVL 282
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 70/166 (42%), Gaps = 41/166 (24%)
Query: 300 VVSFLLAGRDTVASGLTSFFWLLSQHPEV-ESAIRNESDKIMKPNQDLVSFEQLRELHYL 358
++ ++ G +T + + + ++ ++P++ + A++N S
Sbjct: 182 IMLLIIGGNETTTNLIGNMIRVIDENPDIIDDALKNRS---------------------- 219
Query: 359 NAAVYESMRLFPPVQF-DSKFAQEDDILPDGTFVRKGTRVTYHPYAMGRMERIWG-PDCL 416
V E++R + P+QF +FA ED + + ++KG +V + + R E + PD
Sbjct: 220 -GFVEETLRYYSPIQFLPHRFAAEDSYINNKK-IKKGDQVIVYLGSANRDETFFDEPDLF 277
Query: 417 EFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVAL 462
+ + + F G +CLG +A +E S+AL
Sbjct: 278 KIGRREM-------------HLAFGIGIHMCLGAPLARLE-ASIAL 309
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 53/129 (41%), Gaps = 23/129 (17%)
Query: 348 SFEQLRELHYLNAAVYESMRLFPPVQFDSKFAQE-----DDILPDGTFVRKGTRVTYHPY 402
S++ +RE L A V E++R PPV + +E D ++ +G VR +
Sbjct: 231 SWDYVREKGALKA-VEEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVR-----VWIAS 284
Query: 403 AMGRMERIWGPDCLEFKPQRWLRNGRFVPENPFKYPVFQAGHRVCLGKDIALVEMKSVAL 462
A E PD F P R P + F +G +CLG +A +E +
Sbjct: 285 ANRDEEVFKDPDS--FIPDR----------TPNPHLSFGSGIHLCLGAPLARLEARIALE 332
Query: 463 AVVRKFNIR 471
+KF ++
Sbjct: 333 EFAKKFRVK 341
>pdb|2XAF|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With
Para-Bromo- (+)-Cis-2-Phenylcyclopropyl-1-Amine
pdb|2XAG|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With
Para-Bromo- (-)-Trans-2-Phenylcyclopropyl-1-Amine
pdb|2XAH|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With (+)-
Trans-2-Phenylcyclopropyl-1-Amine
pdb|2XAJ|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With
(-)-Trans- 2-Phenylcyclopropyl-1-Amine
pdb|2XAQ|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With A
Tranylcypromine Derivative (Mc2584, 13b)
pdb|2XAS|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With A
Tranylcypromine Derivative (Mc2580, 14e)
Length = 852
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Query: 245 LNIGSEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKYLRDIVVS-F 303
L +G KQ A+ V L E Q+MGF N ++ F D+ D V+ F
Sbjct: 625 LPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCF------DRVFWDPSVNLF 678
Query: 304 LLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMK 341
G T + G FW L + P + + + E+ IM+
Sbjct: 679 GHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIME 716
>pdb|2IW5|A Chain A, Structural Basis For Corest-dependent Demethylation Of
Nucleosomes By The Human Lsd1 Histone Demethylase
pdb|2UXN|A Chain A, Structural Basis Of Histone Demethylation By Lsd1 Revealed
By Suicide Inactivation
pdb|2UXX|A Chain A, Human Lsd1 Histone Demethylase-Corest In Complex With An
Fad-Tranylcypromine Adduct
Length = 666
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
Query: 245 LNIGSEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKYLRDIVVS-F 303
L +G KQ A+ V L E Q+MGF N ++ F D+ D V+ F
Sbjct: 455 LPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCF------DRVFWDPSVNLF 508
Query: 304 LLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLV 347
G T + G FW L + P + + + E+ IM+ D V
Sbjct: 509 GHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDV 552
>pdb|2DW4|A Chain A, Crystal Structure Of Human Lsd1 At 2.3 A Resolution
Length = 660
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
Query: 245 LNIGSEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKYLRDIVVS-F 303
L +G KQ A+ V L E Q+MGF N ++ F D+ D V+ F
Sbjct: 454 LPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCF------DRVFWDPSVNLF 507
Query: 304 LLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLV 347
G T + G FW L + P + + + E+ IM+ D V
Sbjct: 508 GHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDV 551
>pdb|2H94|A Chain A, Crystal Structure And Mechanism Of Human Lysine-Specific
Demethylase-1
Length = 664
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
Query: 245 LNIGSEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKYLRDIVVS-F 303
L +G KQ A+ V L E Q+MGF N ++ F D+ D V+ F
Sbjct: 454 LPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCF------DRVFWDPSVNLF 507
Query: 304 LLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLV 347
G T + G FW L + P + + + E+ IM+ D V
Sbjct: 508 GHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDV 551
>pdb|2EJR|A Chain A, Lsd1-Tranylcypromine Complex
pdb|2Z3Y|A Chain A, Crystal Structure Of Lysine-Specific Demethylase1
pdb|2Z5U|A Chain A, Crystal Structure Of Lysine-Specific Histone Demethylase 1
pdb|3ABT|A Chain A, Crystal Structure Of Lsd1 In Complex With Trans-2-
Pentafluorophenylcyclopropylamine
pdb|3ABU|A Chain A, Crystal Structure Of Lsd1 In Complex With A 2-Pcpa
Derivative, S1201
Length = 662
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
Query: 245 LNIGSEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKYLRDIVVS-F 303
L +G KQ A+ V L E Q+MGF N ++ F D+ D V+ F
Sbjct: 454 LPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCF------DRVFWDPSVNLF 507
Query: 304 LLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLV 347
G T + G FW L + P + + + E+ IM+ D V
Sbjct: 508 GHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDV 551
>pdb|2V1D|A Chain A, Structural Basis Of Lsd1-Corest Selectivity In Histone H3
Recognition
pdb|2Y48|A Chain A, Crystal Structure Of Lsd1-Corest In Complex With A N-
Terminal Snail Peptide
Length = 730
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 7/98 (7%)
Query: 245 LNIGSEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKYLRDIVVS-F 303
L +G KQ A+ V L E Q+MGF N ++ F D+ D V+ F
Sbjct: 503 LPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCF------DRVFWDPSVNLF 556
Query: 304 LLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMK 341
G T + G FW L + P + + + E+ IM+
Sbjct: 557 GHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIME 594
>pdb|2HKO|A Chain A, Crystal Structure Of Lsd1
Length = 664
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
Query: 245 LNIGSEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKYLRDIVVS-F 303
L +G KQ A+ V L E Q+MGF N ++ F D+ D V+ F
Sbjct: 454 LPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCF------DRVFWDPSVNLF 507
Query: 304 LLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLV 347
G T + G FW L + P + + + E+ IM+ D V
Sbjct: 508 GHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDV 551
>pdb|2X0L|A Chain A, Crystal Structure Of A Neuro-Specific Splicing Variant Of
Human Histone Lysine Demethylase Lsd1
Length = 734
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 44/104 (42%), Gaps = 7/104 (6%)
Query: 245 LNIGSEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKYLRDIVVS-F 303
L +G KQ A+ V L E Q+MGF N ++ F D+ D V+ F
Sbjct: 507 LPLGVLKQQPPAVQFVPPLPEWKTSAVQRMGFGNLNKVVLCF------DRVFWDPSVNLF 560
Query: 304 LLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLV 347
G T + G FW L + P + + + E+ IM+ D V
Sbjct: 561 GHVGSTTASRGELFLFWNLYKAPILLALVAGEAAGIMENISDDV 604
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 38/97 (39%), Gaps = 20/97 (20%)
Query: 301 VSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLRELHYLNA 360
V L AG +T + L L H +V +R + A
Sbjct: 249 VHLLTAGHETTTNFLAKAVLTLRAHRDVLDELRTTPEST-------------------PA 289
Query: 361 AVYESMRLFPPVQFDSKFAQEDDILPDGTFVRKGTRV 397
AV E MR PPVQ +++A ED L D R G+RV
Sbjct: 290 AVEELMRYDPPVQAVTRWAYEDIRLGDHDIPR-GSRV 325
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 85/220 (38%), Gaps = 40/220 (18%)
Query: 241 IKRLLNIG-SEKQLKGAINLVNELAETMIHQRQQMGFSKKNDLLSRFMASIDDDKYLRD- 298
+ R L+ G S + ++ + E A+ + + DLL+ + + D R+
Sbjct: 163 VGRTLDRGASAEDMRRGHAAIAEFADYVERALARRRREGGEDLLALMLDAHDRGLMSRNE 222
Query: 299 ---IVVSFLLAGRDTVASGLTSFFWLLSQHPEVESAIRNESDKIMKPNQDLVSFEQLREL 355
VV+F+ G +TVAS + + L HP+ +R D
Sbjct: 223 IVSTVVTFIFTGHETVASQVGNAVLSLLAHPDQLDLLRRRPD------------------ 264
Query: 356 HYLNAAVYESMRLFPPVQFDSKFAQED-DILPDGTFVRKGTRVTYHPYAMGRMERIWGPD 414
L AV E +R P VQ +++ Q D D+ G +R+ V A R
Sbjct: 265 -LLAQAVEECLRYDPSVQSNTR--QLDVDVELRGRRLRRDDVVVVLAGAANR-------- 313
Query: 415 CLEFKPQRWLRNGRF-VPENPFKYPVFQAGHRVCLGKDIA 453
P+R+ R F + +P F AG R CLG +A
Sbjct: 314 ----DPRRYDRPDDFDIERDPVPSMSFGAGMRYCLGSYLA 349
>pdb|3O1A|A Chain A, Structure Of Oxye (Cyp165d3), A Cytochrome P450 Involved
In Teicoplanin Biosynthesis
Length = 417
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 439 VFQAGHRVCLGKDIALVEMKSVALAVVRKF-NIRVSDPNQAPRFAPGLTA 487
F G C+G +A ++++ AVV +F ++R++ P + RF PG A
Sbjct: 357 AFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPEEDLRFKPGRPA 406
>pdb|3OO3|A Chain A, Crystal Structure Of The Orf6 (Cyp165d3) Monooxygenase
Involved In Teicoplanin Biosynthesis
Length = 384
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 439 VFQAGHRVCLGKDIALVEMKSVALAVVRKF-NIRVSDPNQAPRFAPGLTA 487
F G C+G +A ++++ AVV +F ++R++ P + RF PG A
Sbjct: 324 AFGHGIHHCIGAPLARLQLRVALPAVVGRFPSLRLAVPEEDLRFKPGRPA 373
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,344,283
Number of Sequences: 62578
Number of extensions: 584391
Number of successful extensions: 1938
Number of sequences better than 100.0: 143
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 1725
Number of HSP's gapped (non-prelim): 152
length of query: 502
length of database: 14,973,337
effective HSP length: 103
effective length of query: 399
effective length of database: 8,527,803
effective search space: 3402593397
effective search space used: 3402593397
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 53 (25.0 bits)