BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040200
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P14009|14KD_DAUCA 14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1
Length = 137
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 68/142 (47%), Gaps = 31/142 (21%)
Query: 5 SKESKSKALLLSVNLIFFIFLTSIPSSAEEQP----------------------ACSDNF 42
SK S S AL ++N++FF + SS E+ P C +
Sbjct: 3 SKNSASVALFFTLNILFFALV----SSTEKCPDPYKPKPKPTPKPTPTPYPSAGKCPRDA 58
Query: 43 LELDVCVDVLEALSRH-LAPPSKNYCCSLIGNLVELEAMGTCLCTALEVNVLDVIKQETI 101
L+L VC DVL + + P CCSL+ LV LEA CLCTA++ N+L K +
Sbjct: 59 LKLGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEA-AVCLCTAIKANILG--KNLNL 115
Query: 102 PSASLSLLWEYCESEIPSDFQC 123
P A LSL+ C ++P+ F+C
Sbjct: 116 PIA-LSLVLNNCGKQVPNGFEC 136
>sp|Q8RW93|LBP65_ARATH Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana
GN=At4g00165 PE=2 SV=1
Length = 128
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 29 PSSAEEQPACSDNFLELDVCVDVLEALSRHLAPPSKNYCCSLIGNLVELEAMGTCLCTAL 88
P + + C + L+ VC L +S + P CCSLI L + EA CLCTAL
Sbjct: 37 PPAKQATTKCPRDTLKFGVCGSWLGLVSEVIGTPPSQECCSLIKGLADFEAA-VCLCTAL 95
Query: 89 EVNVLDVIKQETIPSASLSLLWEYCESEIPSDFQC 123
+ ++L V + IP A L+LL C +P F C
Sbjct: 96 KTSILGVAPVK-IPVA-LTLLLNSCGKNVPQGFVC 128
>sp|Q00451|PRF1_SOLLC 36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1
PE=2 SV=1
Length = 346
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 5/90 (5%)
Query: 35 QPACSDNFLELDVCVDVLEALSRHLAPPS-KNYCCSLIGNLVELEAMGTCLCTALEVNVL 93
QP C + L+L CVDVL L S K CC L+G LV+L+A CLCT + + +L
Sbjct: 258 QPTCPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDA-AICLCTTIRLKLL 316
Query: 94 DVIKQETIPSASLSLLWEYCESEIPSDFQC 123
++ I +L +L + C P DF+C
Sbjct: 317 NI---NIILPIALQVLIDDCGKYPPKDFKC 343
>sp|Q01595|CCDP_MAIZE Cortical cell-delineating protein OS=Zea mays PE=2 SV=1
Length = 129
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 31 SAEEQPACSDNFLELDVCVDVLEALSRHLAPPSKNYCCSLIGNLVELEAMGTCLCTALEV 90
S+ C + L+L VC VL + L P CC L+ LV+L+A CLCTA++
Sbjct: 41 SSHSHGRCPIDALKLKVCAKVLGLVKVGL--PQYEQCCPLLEGLVDLDA-ALCLCTAIKA 97
Query: 91 NVLDVIKQETIPSASLSLLWEYCESEIPSDFQCIN 125
NVL + +P SL+ + C P DF C N
Sbjct: 98 NVLGI--HLNVP-LSLNFILNNCGRICPEDFTCPN 129
>sp|P24337|HPSE_SOYBN Hydrophobic seed protein OS=Glycine max PE=1 SV=1
Length = 80
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 35 QPACSDNFLELDVCVDVLEALSRHLAPPSKNYCCSLIGNLVELEAMGTCLCTALE-VNVL 93
+P+C D L +C+++L + + + CC+LIG L ++EA+ CLC L + +L
Sbjct: 5 RPSCPD----LSICLNILGG-----SLGTVDDCCALIGGLGDIEAI-VCLCIQLRALGIL 54
Query: 94 DVIKQETIPSASLSLLWEYCESEIPSDFQC 123
++ + +L L+ C PS+ C
Sbjct: 55 NLNR-------NLQLILNSCGRSYPSNATC 77
>sp|P10586|PTPRF_HUMAN Receptor-type tyrosine-protein phosphatase F OS=Homo sapiens
GN=PTPRF PE=1 SV=2
Length = 1907
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 63 SKNYCCSLIGNLVELEAMGTCLCTALEVNVLDVIKQETIPSASLSLLWEYCESE 116
S NY C I +L +EA AL +D++ ET + S++L W+ SE
Sbjct: 293 SANYTCVAISSLGMIEATAQVTVKALPKPPIDLVVTETT-ATSVTLTWDSGNSE 345
>sp|A7MBJ4|PTPRF_BOVIN Receptor-type tyrosine-protein phosphatase F OS=Bos taurus GN=PTPRF
PE=2 SV=1
Length = 1898
Score = 30.0 bits (66), Expect = 4.5, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 63 SKNYCCSLIGNLVELEAMGTCLCTALEVNVLDVIKQETIPSASLSLLWEYCESE 116
S NY C I +L +EA AL +D++ ET + S++L W+ SE
Sbjct: 293 SANYTCVAISSLGMIEATAQVTVKALPKPPIDLVVTETT-ATSVTLTWDSGNSE 345
>sp|Q7SZQ0|MBOA7_DANRE Lysophospholipid acyltransferase 7 OS=Danio rerio GN=mboat7 PE=2
SV=1
Length = 467
Score = 30.0 bits (66), Expect = 4.7, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 55 LSRHLAPPSKNYCCSLIGNLVELEAMGT----CLCTALEVNVLDVIKQETIPSASLSLLW 110
L R+L+PP K L+G ++ + G LCT L ++ I + P +LSL W
Sbjct: 21 LFRYLSPPVKQGAALLLGLIISIATCGIHTLHSLCTVLGTWIIIKINWRSAP--ALSLAW 78
Query: 111 EY 112
+
Sbjct: 79 TF 80
>sp|A8GMA0|EFG_RICAH Elongation factor G OS=Rickettsia akari (strain Hartford) GN=fusA
PE=3 SV=1
Length = 699
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 67 CCSLIGNLVELEAMGTCLCTALEVN---VLDVIKQETIPSASLSLLWEYCESEIPSDFQ 122
C +I + + + + L +E N ++D++K + + SL EYCE +IP+D +
Sbjct: 147 CVEMIKDRLGAKPLVLQLPVGIEENFKGIIDLVKMKAVIWKDESLGAEYCEEDIPADMK 205
>sp|A2AKG8|FOCAD_MOUSE Focadhesin OS=Mus musculus GN=Focad PE=2 SV=1
Length = 1798
Score = 28.9 bits (63), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 73 NLVELEAMGTCLCTAL-EVNVLDVIKQETIPSASLSLLWEYC 113
+L++ +A+G + L E V + I Q T +A+L+LLWE C
Sbjct: 14 SLIQSQAVGHLIAAVLKEHGVSEKIHQSTNQTAALNLLWEKC 55
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,266,078
Number of Sequences: 539616
Number of extensions: 1488721
Number of successful extensions: 2886
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2880
Number of HSP's gapped (non-prelim): 14
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)