Query 040200
Match_columns 132
No_of_seqs 106 out of 296
Neff 4.1
Searched_HMMs 46136
Date Fri Mar 29 06:05:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040200.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040200hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01958 HPS_like HPS_like: Hyd 100.0 6.3E-38 1.4E-42 222.6 2.7 84 36-123 2-85 (85)
2 PF14547 Hydrophob_seed: Hydro 100.0 2.1E-37 4.6E-42 219.5 5.4 85 37-124 1-85 (85)
3 PF14368 LTP_2: Probable lipid 96.9 0.00019 4.1E-09 48.9 -0.3 58 59-123 38-96 (96)
4 smart00499 AAI Plant lipid tra 96.8 0.00084 1.8E-08 43.0 1.9 77 38-123 1-79 (79)
5 cd04660 nsLTP_like nsLTP_like: 96.8 0.001 2.2E-08 44.8 2.4 67 41-123 4-73 (73)
6 cd01959 nsLTP2 nsLTP2: Non-spe 95.8 0.0034 7.4E-08 42.4 0.9 62 43-119 4-65 (66)
7 PF00234 Tryp_alpha_amyl: Prot 92.1 0.025 5.3E-07 38.4 -1.2 68 42-123 12-90 (90)
8 cd00010 AAI_LTSS AAI_LTSS: Alp 90.6 0.11 2.4E-06 33.1 0.8 50 61-114 13-62 (63)
9 PF07172 GRP: Glycine rich pro 89.3 0.28 6.1E-06 35.4 2.1 25 1-27 1-25 (95)
10 cd01960 nsLTP1 nsLTP1: Non-spe 80.4 1 2.3E-05 30.9 1.5 68 42-118 7-79 (89)
11 PF03511 Fanconi_A: Fanconi an 54.9 10 0.00022 26.1 2.0 39 15-57 4-46 (64)
No 1
>cd01958 HPS_like HPS_like: Hydrophobic Protein from Soybean (HPS)-like subfamily; composed of proteins with similarity to HPS, a small hydrophobic protein with unknown function related to cereal-type alpha-amylase inhibitors and lipid transfer proteins. In addition to HPS, members of this subfamily include a hybrid proline-rich protein (HyPRP) from maize, a dark-inducible protein (LeDI-2) from Lithospermum erythrorhizon, maize ZRP3 protein, and rice RcC3 protein. HyPRP is an embryo-specific protein that contains an N-terminal proline-rich domain and a C-terminal HPS-like cysteine-rich domain. It has been suggested that HyPRP may be involved in the stability and defense of the developing embryo. LeDI-2 is a root-specific protein that may be involved in regulating the biosynthesis of shikonin derivatives in L. erythrorhizon. Maize ZRP3 and rice RcC3 are root-specific proteins whose functions are yet to be determined. It has been reported that ZRP3 largely accumulates in a distinct subset
Probab=100.00 E-value=6.3e-38 Score=222.56 Aligned_cols=84 Identities=42% Similarity=0.882 Sum_probs=82.4
Q ss_pred CCCCccccchhHHHhHHHHhhhhcCCCCCCccccccccccccccchhhhhHhhhcccccccccCCCCcchHHHHHHHhCC
Q 040200 36 PACSDNFLELDVCVDVLEALSRHLAPPSKNYCCSLIGNLVELEAMGTCLCTALEVNVLDVIKQETIPSASLSLLWEYCES 115 (132)
Q Consensus 36 ~~CP~d~lkL~vCanVL~l~~~~lg~p~~~~CCsli~gL~dldA~avCLCtAikanvLgI~~l~~ip~v~l~llln~CGk 115 (132)
++||+|++|||+|+|||+++++.+|.|+.++|||+|+||+|+|| |+|||||+|+|+||| ++ |+| +++++++|+|||
T Consensus 2 ~~CP~dalkLgvCanvL~l~~~~~g~~~~~~CC~ll~GL~dldA-A~CLCtaikan~lgi-~~-~~p-v~l~llln~CGk 77 (85)
T cd01958 2 PTCPRDALKLGVCANVLGLSLLLLGTPAVQPCCPLIGGLADLDA-AVCLCTAIKANILGI-SI-NIP-VALSLLLNSCGR 77 (85)
T ss_pred CCCCcchHHhchhHhhhhccccccCCCccchHHHHHcCchhhhe-eeeeeeeeeccccCc-cc-ccC-hhHHHHHHHHcC
Confidence 78999999999999999999999999999999999999999999 999999999999998 99 999 999999999999
Q ss_pred CCCCCccc
Q 040200 116 EIPSDFQC 123 (132)
Q Consensus 116 ~~P~gF~C 123 (132)
++|+||+|
T Consensus 78 ~~P~gf~C 85 (85)
T cd01958 78 NVPPGFTC 85 (85)
T ss_pred cCCCCCcC
Confidence 99999998
No 2
>PF14547 Hydrophob_seed: Hydrophobic seed protein
Probab=100.00 E-value=2.1e-37 Score=219.50 Aligned_cols=85 Identities=41% Similarity=0.862 Sum_probs=82.7
Q ss_pred CCCccccchhHHHhHHHHhhhhcCCCCCCccccccccccccccchhhhhHhhhcccccccccCCCCcchHHHHHHHhCCC
Q 040200 37 ACSDNFLELDVCVDVLEALSRHLAPPSKNYCCSLIGNLVELEAMGTCLCTALEVNVLDVIKQETIPSASLSLLWEYCESE 116 (132)
Q Consensus 37 ~CP~d~lkL~vCanVL~l~~~~lg~p~~~~CCsli~gL~dldA~avCLCtAikanvLgI~~l~~ip~v~l~llln~CGk~ 116 (132)
+||+|++|||+|+||||++++.+|.|++++|||+|+||+|+|| |+|||||+|+|++|++++ ++| +++++++|.|||+
T Consensus 1 ~CP~d~lkLgvC~~vL~l~~~~~g~~~~~~CC~li~gL~d~~A-A~CLC~aika~vlg~i~~-~ip-v~l~~lln~CGk~ 77 (85)
T PF14547_consen 1 TCPRDALKLGVCANVLGLVNLVIGNPPRQPCCSLIAGLADLDA-AVCLCTAIKANVLGLINV-NIP-VALNLLLNACGKT 77 (85)
T ss_pred CCCCcchhhhhhhhhhhhhccccCCCCCCCcChHHhCcccchH-HHHHHHHHhhhccccccc-ccc-cHHHHHHHHhCCc
Confidence 6999999999999999999999999999999999999999999 999999999999995599 999 9999999999999
Q ss_pred CCCCcccC
Q 040200 117 IPSDFQCI 124 (132)
Q Consensus 117 ~P~gF~C~ 124 (132)
+|+||+|+
T Consensus 78 ~p~gf~C~ 85 (85)
T PF14547_consen 78 VPSGFTCP 85 (85)
T ss_pred CcCCCcCC
Confidence 99999996
No 3
>PF14368 LTP_2: Probable lipid transfer; PDB: 2RKN_A 1N89_A 1TUK_A.
Probab=96.92 E-value=0.00019 Score=48.93 Aligned_cols=58 Identities=22% Similarity=0.476 Sum_probs=34.2
Q ss_pred cCCCCCCccccccccccccccchhhhhHhhhccc-ccccccCCCCcchHHHHHHHhCCCCCCCccc
Q 040200 59 LAPPSKNYCCSLIGNLVELEAMGTCLCTALEVNV-LDVIKQETIPSASLSLLWEYCESEIPSDFQC 123 (132)
Q Consensus 59 lg~p~~~~CCsli~gL~dldA~avCLCtAikanv-LgI~~l~~ip~v~l~llln~CGk~~P~gF~C 123 (132)
-+.+|..+||.-++.+.+.| ..|||..++... .++ .+ |. -....|-..||...|. ++|
T Consensus 38 ~~~~Ps~~CC~~l~~~~~~~--~~ClC~~~~~~~~~~~-~i-n~--~~a~~Lp~~Cg~~~~~-~~C 96 (96)
T PF14368_consen 38 GGPAPSAACCSALKSVVQAD--PPCLCQLLNSPGAPGF-GI-NV--TRALALPAACGVPVPP-SKC 96 (96)
T ss_dssp C-----HHHHHHHCC----H--CCHHHCCCC-CCHCHH-CC-TC--HHHHHHHHHCTSS-S-----
T ss_pred CCCCCCHHHHHHHHHhccCC--CCCHHHhcCccccccC-Cc-CH--HHHHHHHHHcCCCCCC-CCC
Confidence 35667789999999998754 599999999976 444 44 54 3666788999999998 887
No 4
>smart00499 AAI Plant lipid transfer protein / seed storage protein / trypsin-alpha amylase inhibitor domain family.
Probab=96.78 E-value=0.00084 Score=42.98 Aligned_cols=77 Identities=27% Similarity=0.516 Sum_probs=51.7
Q ss_pred CCccccchhHHHhHHHHhhhhcCCCCCCccccccccccccccchhhhhHhhhcccccccccC--CCCcchHHHHHHHhCC
Q 040200 38 CSDNFLELDVCVDVLEALSRHLAPPSKNYCCSLIGNLVELEAMGTCLCTALEVNVLDVIKQE--TIPSASLSLLWEYCES 115 (132)
Q Consensus 38 CP~d~lkL~vCanVL~l~~~~lg~p~~~~CCsli~gL~dldA~avCLCtAikanvLgI~~l~--~ip~v~l~llln~CGk 115 (132)
|.....++..|.+.+.... -..++.++||.-+.++. . ..|+|.+++....++ ..+ ..+ .....|-+.||.
T Consensus 1 C~~~~~~~~~c~~~~~~~~--~~~~p~~~CC~~l~~~~---~-~~C~C~~~~~~~~~~-~~~~~~~~-~~a~~lp~~C~~ 72 (79)
T smart00499 1 CGQVLLQLAPCLSYLTGGS--PGAPPSQQCCSQLRGLN---S-AQCRCLALRAAVLGI-LEIPGVNA-QNAASLPSACGV 72 (79)
T ss_pred ChhhhhhHHhhHHHHcCCC--CCCCCchHHHHHHHHhc---c-cCCcchhhhcccccc-cchhhhhH-HHHHhhHHhcCC
Confidence 4445556667777752110 12456688999999998 4 689999999987665 210 012 567788899999
Q ss_pred CCCCCccc
Q 040200 116 EIPSDFQC 123 (132)
Q Consensus 116 ~~P~gF~C 123 (132)
..|. +.|
T Consensus 73 ~~~~-~~C 79 (79)
T smart00499 73 PPPY-TDC 79 (79)
T ss_pred CCCC-CCC
Confidence 9876 544
No 5
>cd04660 nsLTP_like nsLTP_like: Non-specific lipid-transfer protein (nsLTP)-like subfamily; composed of predominantly uncharacterized proteins with similarity to nsLTPs, including Medicago truncatula MtN5, the root-specific Phaseolus vulgaris PVR3, Antirrhinum majus FIL1, and Lilium longiflorum LIM3. Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. The MtN5 gene is induced during root nodule development. FIL1 is thought to be important in petal and stamen formation. The LIM3 gene is induced during the early prophase stage of meiosis in lily microsporocytes.
Probab=96.78 E-value=0.001 Score=44.81 Aligned_cols=67 Identities=22% Similarity=0.441 Sum_probs=48.5
Q ss_pred cccchhHHHhHHHHhhhhcCC---CCCCccccccccccccccchhhhhHhhhcccccccccCCCCcchHHHHHHHhCCCC
Q 040200 41 NFLELDVCVDVLEALSRHLAP---PSKNYCCSLIGNLVELEAMGTCLCTALEVNVLDVIKQETIPSASLSLLWEYCESEI 117 (132)
Q Consensus 41 d~lkL~vCanVL~l~~~~lg~---p~~~~CCsli~gL~dldA~avCLCtAikanvLgI~~l~~ip~v~l~llln~CGk~~ 117 (132)
|..+|..|...+ .-|. +|.+.||+-|+.+ |. .|+|..++.....+| |. -....|-..||..+
T Consensus 4 ~~~~L~~C~~yl-----~~~~~~~~Ps~~CC~~vk~~---~~--~C~C~~~~~~~~~~i---~~--~~a~~Lp~~Cgv~~ 68 (73)
T cd04660 4 DLDLLAECQPYV-----TGPNPPPPPSRECCAALRRA---DL--PCLCRYKTSLVLQII---DP--DKAVYLPAKCGLPL 68 (73)
T ss_pred CHHHHHHHHHHH-----cCCCCCCCCCHHHHHHHHcC---Cc--CCEeeccCCCccccc---CH--HHHHHHHHHcCCCC
Confidence 344677888875 1122 3567899999974 44 399999988766532 43 46778899999999
Q ss_pred CCCccc
Q 040200 118 PSDFQC 123 (132)
Q Consensus 118 P~gF~C 123 (132)
|. ++|
T Consensus 69 p~-~~C 73 (73)
T cd04660 69 PP-SSC 73 (73)
T ss_pred CC-CCC
Confidence 99 987
No 6
>cd01959 nsLTP2 nsLTP2: Non-specific lipid-transfer protein type 2 (nsLTP2) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. nsLTP2 can bind lipids and sterols. Structure studies of rice nsLTPs show that the plasticity of the hydrophobic cavity is an important factor in ligand binding. The flexibility of the sLTP2 cavity allows its binding to rigid sterol molecules, whereas nsLTP1 cannot bind sterols despite its larger cavity size. The resulting nsLTP2/sterol complexes may bind to receptors that trigger defense responses. nsLTP2 gene exp
Probab=95.85 E-value=0.0034 Score=42.43 Aligned_cols=62 Identities=19% Similarity=0.449 Sum_probs=46.2
Q ss_pred cchhHHHhHHHHhhhhcCCCCCCccccccccccccccchhhhhHhhhcccccccccCCCCcchHHHHHHHhCCCCCC
Q 040200 43 LELDVCVDVLEALSRHLAPPSKNYCCSLIGNLVELEAMGTCLCTALEVNVLDVIKQETIPSASLSLLWEYCESEIPS 119 (132)
Q Consensus 43 lkL~vCanVL~l~~~~lg~p~~~~CCsli~gL~dldA~avCLCtAikanvLgI~~l~~ip~v~l~llln~CGk~~P~ 119 (132)
.+|..|...+ ..|.+|+.+||.-|.. + .-|||.-+|...++. .+ |.| .-.-|.+.||..+|.
T Consensus 4 ~~L~~C~~ai-----~~~~~Ps~~CC~~Lk~-----~-~~CLC~y~~~p~l~~-~i-~~~--~A~~l~~~Cgv~~P~ 65 (66)
T cd01959 4 TQLSPCLPAI-----LGGSPPSAACCAKLKE-----Q-QSCLCQYAKNPSLKQ-YV-NSP--NARKVLAACGVPYPN 65 (66)
T ss_pred hhcccCHHHH-----hCCCCCCHHHHHHHhc-----C-CCCeeeeecCccHHh-hc-CcH--HHHHHHHHcCCCCCC
Confidence 4678888864 2467889999999986 3 469999998876774 34 555 455678899999874
No 7
>PF00234 Tryp_alpha_amyl: Protease inhibitor/seed storage/LTP family This is a small subfamily; InterPro: IPR003612 This domain is found is several proteins, including plant lipid transfer proteins [], seed storage proteins [] and trypsin-alpha amylase inhibitors [, ]. The domain forms a four-helical bundle in a right-handed superhelix with a folded leaf topology, which is stabilised by disulphide bonds, and which has an internal cavity. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; PDB: 1BFA_A 1BEA_A 1MID_A 1BE2_A 1LIP_A 3GSH_A 1JTB_A 1UVC_B 1BV2_A 1UVB_A ....
Probab=92.14 E-value=0.025 Score=38.38 Aligned_cols=68 Identities=24% Similarity=0.446 Sum_probs=47.4
Q ss_pred ccchhHHHhHHHHhhhhcC-CCCCCccccccccccccccchhhhhHhhhccccccc----------ccCCCCcchHHHHH
Q 040200 42 FLELDVCVDVLEALSRHLA-PPSKNYCCSLIGNLVELEAMGTCLCTALEVNVLDVI----------KQETIPSASLSLLW 110 (132)
Q Consensus 42 ~lkL~vCanVL~l~~~~lg-~p~~~~CCsli~gL~dldA~avCLCtAikanvLgI~----------~l~~ip~v~l~lll 110 (132)
...+..|...+. -+ .++.+.||.-|+++ - ..|.|.+||..+.++. .+ +. -....|-
T Consensus 12 ~~~l~~c~~~~~-----~~~~~~~~~CC~~L~~l----~-~~C~C~~i~~~~~~~~~q~~~~~~~~~~-~~--~~a~~LP 78 (90)
T PF00234_consen 12 QVRLSPCLPYLQ-----GGCQQPSQQCCQQLRQL----D-PQCRCEAIRQMVRQVIQQQQQGGQEMQI-MA--QRAQNLP 78 (90)
T ss_dssp SSHHHGGHHHHT-----TSSSHHHHHHHHHHHHH----H-HHHHHHHHHHHHHHSHHCTSTCSHHHHH-HH--HHHHHHH
T ss_pred cccccccHHHHh-----cccccchHHHhHHHHHH----h-HHhhCHHHHHHHHhhhhhhhhhHHHHHH-HH--HHHHHHH
Confidence 355777777752 11 23467899999998 3 7999999998887631 12 22 4677788
Q ss_pred HHhCCCCCCCccc
Q 040200 111 EYCESEIPSDFQC 123 (132)
Q Consensus 111 n~CGk~~P~gF~C 123 (132)
+.||..+|. |.|
T Consensus 79 ~~C~v~~~~-~~C 90 (90)
T PF00234_consen 79 SMCNVSPPY-TDC 90 (90)
T ss_dssp HHTTSSSSS-S-G
T ss_pred HHCCCCCCC-CCC
Confidence 999999987 555
No 8
>cd00010 AAI_LTSS AAI_LTSS: Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein family; a protein family unique to higher plants that includes cereal-type alpha-amylase inhibitors, lipid transfer proteins, seed storage proteins, and similar proteins. Proteins in this family are known to play important roles, in defending plants from insects and pathogens, lipid transport between intracellular membranes, and nutrient storage. Many proteins of this family have been identified as allergens in humans. These proteins contain a common pattern of eight cysteines that form four disulfide bridges.
Probab=90.56 E-value=0.11 Score=33.13 Aligned_cols=50 Identities=22% Similarity=0.366 Sum_probs=33.5
Q ss_pred CCCCCccccccccccccccchhhhhHhhhcccccccccCCCCcchHHHHHHHhC
Q 040200 61 PPSKNYCCSLIGNLVELEAMGTCLCTALEVNVLDVIKQETIPSASLSLLWEYCE 114 (132)
Q Consensus 61 ~p~~~~CCsli~gL~dldA~avCLCtAikanvLgI~~l~~ip~v~l~llln~CG 114 (132)
.+|..+||+-++.+.+.|. .|||..+|...... .. .+..-....|-..||
T Consensus 13 ~~Ps~~CC~~l~~~~~~~~--~ClC~~~~~~~~~~-~~-~~~~~~a~~LP~~Cg 62 (63)
T cd00010 13 TAPPSDCCSGLKSVVKSDP--KCLCAALNGPGASL-LG-LKNATRALALPAACG 62 (63)
T ss_pred CCCChHHHHHHHHHHhcCh--hhHHHHHcCccccc-cC-cccHHHHHhchHhcC
Confidence 3567889999999988766 79999999865442 11 111034555666666
No 9
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=89.26 E-value=0.28 Score=35.37 Aligned_cols=25 Identities=28% Similarity=0.188 Sum_probs=14.6
Q ss_pred CCCCccchhHHHHHHHHHHHHHHHhhc
Q 040200 1 MASTSKESKSKALLLSVNLIFFIFLTS 27 (132)
Q Consensus 1 MAsk~~~~~s~Al~L~lnllff~~~s~ 27 (132)
||||+. -.+++||++-||+++-+++
T Consensus 1 MaSK~~--llL~l~LA~lLlisSevaa 25 (95)
T PF07172_consen 1 MASKAF--LLLGLLLAALLLISSEVAA 25 (95)
T ss_pred CchhHH--HHHHHHHHHHHHHHhhhhh
Confidence 999863 3445555555555555554
No 10
>cd01960 nsLTP1 nsLTP1: Non-specific lipid-transfer protein type 1 (nsLTP1) subfamily; Plant nsLTPs are small, soluble proteins that facilitate the transfer of fatty acids, phospholipids, glycolipids, and steroids between membranes. In addition to lipid transport and assembly, nsLTPs also play a key role in the defense of plants against pathogens. There are two closely-related types of nsLTPs, types 1 and 2, which differ in protein sequence, molecular weight, and biological properties. nsLTPs contain an internal hydrophobic cavity, which serves as the binding site for lipids. The hydrophobic cavity accommodates various fatty acid ligands containing from ten to 18 carbon atoms. In general, the cavity is larger in nsLTP1 than in nsLTP2. nsLTP1 proteins are located in extracellular layers and in vacuolar structures. They may be involved in the formation of cutin layers on plant surfaces by transporting cutin monomers. Many nsLTP1 proteins have been characterized as allergens in humans.
Probab=80.40 E-value=1 Score=30.85 Aligned_cols=68 Identities=22% Similarity=0.325 Sum_probs=42.0
Q ss_pred ccchhHHHhHHHHhhhhcCCCCCCcccccccccccc----ccchhhhhHhhhcccccccc-cCCCCcchHHHHHHHhCCC
Q 040200 42 FLELDVCVDVLEALSRHLAPPSKNYCCSLIGNLVEL----EAMGTCLCTALEVNVLDVIK-QETIPSASLSLLWEYCESE 116 (132)
Q Consensus 42 ~lkL~vCanVL~l~~~~lg~p~~~~CCsli~gL~dl----dA~avCLCtAikanvLgI~~-l~~ip~v~l~llln~CGk~ 116 (132)
..+|.-|.+.+. .-+..|..+||.-++.|.+. +- ..|+|.-+|....++ . + |. -.+..|=..||-+
T Consensus 7 ~~~l~~C~~y~~----g~~~~Ps~~CC~~v~~l~~~~~t~~~-~~~~C~C~~~~~~~~-~~i-~~--~~a~~LP~~C~v~ 77 (89)
T cd01960 7 TSLLAPCLGYLT----GGGPAPSPACCSGVKSLNGLAKTTAD-RQAACNCLKSAAAGI-SGL-NP--GRAAGLPGKCGVS 77 (89)
T ss_pred HhhHHhHHHHHh----CCCCCCChHHhhhhHHHhhccCCCCc-hhhhhhccccccccc-CCC-CH--HHHHhChHhcccC
Confidence 346777888763 11235678899999998654 11 246666676655554 2 2 32 3455566789987
Q ss_pred CC
Q 040200 117 IP 118 (132)
Q Consensus 117 ~P 118 (132)
.|
T Consensus 78 ~~ 79 (89)
T cd01960 78 IP 79 (89)
T ss_pred CC
Confidence 65
No 11
>PF03511 Fanconi_A: Fanconi anaemia group A protein; InterPro: IPR003516 Fanconi anaemia (FA) [, , ] is a recessive inherited disease characterised by defective DNA repair. FA cells are sensitive to DNA cross-linking agents that cause chromosomal instability and cell death. The disease is manifested clinically by progressive pancytopenia, variable physical anomalies, and predisposition to malignancy []. Four complementation groups have been identified, designated A to D. The FA group A gene (FAA) has been cloned [], but its function remains to be elucidated.
Probab=54.86 E-value=10 Score=26.08 Aligned_cols=39 Identities=31% Similarity=0.563 Sum_probs=22.1
Q ss_pred HHHHHHHHHHh---hcCCCCCCCCCCCCccccchhHHHhHHH-Hhhh
Q 040200 15 LSVNLIFFIFL---TSIPSSAEEQPACSDNFLELDVCVDVLE-ALSR 57 (132)
Q Consensus 15 L~lnllff~~~---s~~~~~p~~~~~CP~d~lkL~vCanVL~-l~~~ 57 (132)
+.+.|+||++. |+-- .|......++ .+.+|+.||+ |=+.
T Consensus 4 lLvsLfFFSLM~LlSs~l-~p~~~~d~~k---aldiCaeIL~cLE~R 46 (64)
T PF03511_consen 4 LLVSLFFFSLMGLLSSYL-APKEGADSLK---ALDICAEILGCLEKR 46 (64)
T ss_pred hHHHHHHHHHHHHHHHhc-CcccccccHH---HHHHHHHHHHHHHhC
Confidence 45677888753 4322 2222222332 4799999998 5443
Done!