BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040202
(297 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 131 bits (330), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 170
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 171 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 289
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 290 --VTKPVPHL 297
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 113 LQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 170
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 289
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 290 --VTKPVPHL 297
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 177
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 178 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 238 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 296
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 297 --VTKPVPHL 304
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 170
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 289
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 290 --VTKPVPHL 297
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 169
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 288
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 289 --VTKPVPHL 296
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 171
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 290
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 291 --VTKPVPHL 298
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 114
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 172
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 233 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 291
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 292 --VTKPVPHL 299
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 169
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 288
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 289 --VTKPVPHL 296
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 170
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 289
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 290 --VTKPVPHL 297
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 169
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 288
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 289 --VTKPVPHL 296
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 170
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 289
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 290 --VTKPVPHL 297
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 171
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 290
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 291 --VTKPVPHL 298
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 173
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 292
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 293 --VTKPVPHL 300
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 114
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 172
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 233 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 291
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 292 --VTKPVPHL 299
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 170
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 289
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 290 --VTKPVPHL 297
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 170
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 289
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 290 --VTKPVPHL 297
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 170
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 289
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 290 --VTKPVPHL 297
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 131 bits (329), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 171
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 290
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 291 --VTKPVPHL 298
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 114 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 171
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 290
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 291 --VTKPVPHL 298
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 169
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 288
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 289 --VTKPVPHL 296
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 174
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 234
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 235 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 293
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 294 --VTKPVPHL 301
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 114
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 115 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 172
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 233 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 291
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 292 --VTKPVPHL 299
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 111
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 169
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 288
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 289 --VTKPVPHL 296
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 131 bits (329), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 60 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 119
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 120 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 177
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 178 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 237
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 238 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 296
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 297 --VTKPVPHL 304
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 130 bits (328), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 173
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 292
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 293 --VTKPVPHL 300
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 57 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 116
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 117 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 174
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 234
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 235 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 293
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 294 --VTKPVPHL 301
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 130 bits (328), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 123/250 (49%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF++++ DL K M SA ++ FQ+
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 173
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 292
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 293 --VTKPVPHL 300
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 130 bits (327), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 116 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 173
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 292
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 293 --VTKPVPHL 300
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 122/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 54 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 171
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 231
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 232 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 290
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 291 --VTKPVPHL 298
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 130 bits (327), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 46/239 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL K M SA ++ FQ+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL 112
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 113 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 170
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRS 196
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 289
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 121/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL M SA ++ FQ+
Sbjct: 53 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQL 112
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 113 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 170
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 230
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 231 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 289
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 290 --VTKPVPHL 297
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 129 bits (323), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 121/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL M SA ++ FQ+
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQL 115
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 173
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 292
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 293 --VTKPVPHL 300
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 121/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL M SA ++ FQ+
Sbjct: 55 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQL 114
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 172
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 232
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 233 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 291
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 292 --VTKPVPHL 299
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 121/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL M SA ++ FQ+
Sbjct: 56 ISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQL 115
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYXHEVVTLWYR 173
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 233
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 234 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 292
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 293 --VTKPVPHL 300
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 128 bits (321), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 121/250 (48%), Gaps = 49/250 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K NHPNIVKL +++ +++VF+++ DL M SA ++ FQ+
Sbjct: 52 ISLLKELNHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQL 111
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
QGL + H HRDLKP NLL+ ++G IK+ D G+ + +P Y V T WYR
Sbjct: 112 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF--GVPVRTYTHEVVTLWYR 169
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------- 163
APE+LL + VD W++G I EM++ R LFPG + DQ+++I
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG 229
Query: 164 ----------YGRWV----------------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ +W +L+S + ++P R +A AL HPFF+
Sbjct: 230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD- 288
Query: 198 HFVPRSVPLL 207
V + VP L
Sbjct: 289 --VTKPVPHL 296
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 125 bits (313), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 121/249 (48%), Gaps = 56/249 (22%)
Query: 10 HPNIVKLRNLVKEH-----EDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H N++ +R++++ DV+IV D ME+DL KL+K Q S D +Q+ +G
Sbjct: 100 HENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLK---SQQLSNDHICYFLYQILRG 156
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + E D + T+ V TRWYRAP
Sbjct: 157 LKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAP 216
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG-------------- 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCII 276
Query: 166 ----------------------------RWVALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+ + L+ + ++NP R T EAL HP+
Sbjct: 277 NMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAHPYLEQ- 335
Query: 198 HFVPRSVPL 206
++ P P+
Sbjct: 336 YYDPTDEPV 344
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICYFLYQILRG 136
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 138
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL+ + +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 244
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 123 bits (308), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICYFLYQILRG 136
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 138
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 244
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 140
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICYFLYQILRG 136
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK---TQHLSNDHICYFLYQILRG 136
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 82 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 138
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 139 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 198
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 199 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 244
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 140
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 156
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 262
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 140
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 134
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 135 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 240
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 141
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 142 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 201
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 247
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 86 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 142
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 143 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 202
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 203 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 248
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 77 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 133
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 134 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 193
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 194 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 239
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 140
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 88 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 144
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 145 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 204
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 205 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 250
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 80 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 136
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 137 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 196
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 197 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 242
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 78 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 134
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 135 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 194
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 195 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 240
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/166 (40%), Positives = 102/166 (61%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK---CQHLSNDHICYFLYQILRG 140
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 120 bits (301), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 120/248 (48%), Gaps = 58/248 (23%)
Query: 6 KMNNHPNIVKLRNLVK------EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCF 59
K H NI+ ++++++ E + V++V D MESDL +++ S Q + + R +
Sbjct: 108 KHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLY 165
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPC------TDYVT 112
Q+ +GL YMH HRDLKPSNLLV++ +KIGD GM + + +S P T+YV
Sbjct: 166 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS-PAEHQYFMTEYVA 224
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYG---- 165
TRWYRAPE++L +D W++G I EML+ R LFPGKN Q I + G
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSP 284
Query: 166 -----------------------------------RWVALISWLCSWNPRMRPTAAEALE 190
+ ++L+ + + P R +AA AL
Sbjct: 285 AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344
Query: 191 HPFFRSCH 198
HPF H
Sbjct: 345 HPFLAKYH 352
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/171 (40%), Positives = 101/171 (59%), Gaps = 16/171 (9%)
Query: 6 KMNNHPNIVKLRNLVK------EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCF 59
K H NI+ ++++++ E + V++V D MESDL +++ S Q + + R +
Sbjct: 109 KHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHVRYFLY 166
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPC------TDYVT 112
Q+ +GL YMH HRDLKPSNLLV++ +KIGD GM + + +S P T+YV
Sbjct: 167 QLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS-PAEHQYFMTEYVA 225
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
TRWYRAPE++L +D W++G I EML+ R LFPGKN Q+ I
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLI 276
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 101/169 (59%), Gaps = 13/169 (7%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K H N++ L ++ ++ D ++V +M++DL K+M G FSE++ +
Sbjct: 92 LLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM----GMEFSEEKIQ 147
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ +GL Y+H G HRDLKP NL V++ +KI D G+ + D+ + T YV TR
Sbjct: 148 YLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM--TGYVVTR 205
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
WYRAPEV+L VD W++G IM EML+ + LF GK+ DQ+ +I
Sbjct: 206 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 254
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 99/166 (59%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 84 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 140
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDY----VTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + D T + V TRWYRAP
Sbjct: 141 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 201 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 246
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 67/166 (40%), Positives = 99/166 (59%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV+IV D ME+DL KL+K Q+ S D +Q+ +G
Sbjct: 85 HENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT---QHLSNDHICYFLYQILRG 141
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDY----VTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + D T + V TRWYRAP
Sbjct: 142 LKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAP 201
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 202 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 247
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 101/169 (59%), Gaps = 13/169 (7%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K H N++ L ++ ++ D ++V +M++DL K+M G FSE++ +
Sbjct: 74 LLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIM----GLKFSEEKIQ 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ +GL Y+H G HRDLKP NL V++ +KI D G+ + D+ + T YV TR
Sbjct: 130 YLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEM--TGYVVTR 187
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
WYRAPEV+L VD W++G IM EML+ + LF GK+ DQ+ +I
Sbjct: 188 WYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 117 bits (292), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/166 (39%), Positives = 100/166 (60%), Gaps = 13/166 (7%)
Query: 10 HPNIVKLRNLVK-----EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
H NI+ + ++++ + +DV++V M +DL KL+K Q+ S D +Q+ +G
Sbjct: 100 HENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRG 156
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVK----EIDSSLPCTDYVTTRWYRAP 119
L Y+H HRDLKPSNLL++ +KI D G+ + + D + T+YV TRWYRAP
Sbjct: 157 LKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAP 216
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG 165
E++L S+ +D W++G I+ EMLS R +FPGK+ DQ+ I G
Sbjct: 217 EIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILG 262
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 14/190 (7%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K +HPNIV L +++ + +VF++ME DL K++ E+ + + + +Q+
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQL 128
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
+G+ + H+ HRDLKP NLL+ S G +K+ D G+ + +P Y V T WYR
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYR 186
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCSW 177
AP+VL+ S+ VD W++G I EM++ + LFPG DQ+ KI+ S L +
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF-------SILGTP 239
Query: 178 NPRMRPTAAE 187
NPR P E
Sbjct: 240 NPREWPQVQE 249
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 115 bits (287), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 14/190 (7%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K +HPNIV L +++ + +VF++ME DL K++ E+ + + + +Q+
Sbjct: 70 ISLLKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQL 128
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
+G+ + H+ HRDLKP NLL+ S G +K+ D G+ + +P Y V T WYR
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF--GIPVRSYTHEVVTLWYR 186
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCSW 177
AP+VL+ S+ VD W++G I EM++ + LFPG DQ+ KI+ S L +
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIF-------SILGTP 239
Query: 178 NPRMRPTAAE 187
NPR P E
Sbjct: 240 NPREWPQVQE 249
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 122/256 (47%), Gaps = 52/256 (20%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
+ L K H NIV L +++ + + +VF+Y++ DL + + + G + + FQ+
Sbjct: 51 VSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYL-DDCGNIINMHNVKLFLFQL 109
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
+GL Y HRQ HRDLKP NLL++ +G +K+ D G+ + S+P Y V T WYR
Sbjct: 110 LRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARA--KSIPTKTYDNEVVTLWYR 167
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYG-----RWVA 169
P++LL S ++D W +G I +EM + R LFPG +Q I++I G W
Sbjct: 168 PPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPG 227
Query: 170 LIS---------------WLCSWNPRM------------------RPTAAEALEHPFFRS 196
++S L S PR+ R +A +A++HPFF S
Sbjct: 228 ILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLS 287
Query: 197 ----CHFVPRSVPLLC 208
H +P + +
Sbjct: 288 LGERIHKLPDTTSIFA 303
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 96/164 (58%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L + VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 112/244 (45%), Gaps = 54/244 (22%)
Query: 4 LRKMNNHPNIVKLRNLVKEHE------DVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ E D ++V +M +DL KLMK + ED + L
Sbjct: 77 LLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKH---EKLGEDRIQFL 133
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H G HRDLKP NL V++ +KI D G+ ++ DS + V TRWY
Sbjct: 134 VYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGX--VVTRWY 191
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR------- 166
RAPEV+L VD W++G IM EM++ + LF G + DQ I K+ G
Sbjct: 192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQ 251
Query: 167 --------------------------------WVALISWLCSWNPRMRPTAAEALEHPFF 194
V L+ + + R TA EAL HP+F
Sbjct: 252 RLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYF 311
Query: 195 RSCH 198
S H
Sbjct: 312 ESLH 315
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX---QKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 93/160 (58%), Gaps = 7/160 (4%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI+ L + ++ +VFD+ME+DL ++K+++ + + QGL Y+
Sbjct: 70 SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMTLQGLEYL 128
Query: 69 HRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDY---VTTRWYRAPEVLLL 124
H+ HRDLKP+NLL+ + GV+K+ D G+ K S P Y V TRWYRAPE+L
Sbjct: 129 HQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS--PNRAYXHQVVTRWYRAPELLFG 186
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY 164
+ + G VD WA+G I+ E+L PG + DQ+ +I+
Sbjct: 187 ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIF 226
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKX---QKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---SQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 111/246 (45%), Gaps = 55/246 (22%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLC--- 58
I L K H NIV+L +++ + +VF++M++DL K M N NL
Sbjct: 54 ISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYF 113
Query: 59 -FQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDY---VTT 113
+Q+ QGL + H HRDLKP NLL++K G +K+GD G+ + +P + V T
Sbjct: 114 QWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF--GIPVNTFSSEVVT 171
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY--------- 164
WYRAP+VL+ S +D W+ G I+ EM++ + LFPG N +Q+ I+
Sbjct: 172 LWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNES 231
Query: 165 ------------------------------------GRWVALISWLCSWNPRMRPTAAEA 188
G + + L NP MR +A +A
Sbjct: 232 LWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQA 291
Query: 189 LEHPFF 194
L HP+F
Sbjct: 292 LHHPWF 297
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K+ NH NI+ L N+ ++E +DV+IV + M+++L ++++ +
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +LFPG + DQ W +I L
Sbjct: 190 YYRAPEV-ILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH 191
+ +P +++PT +E+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVEN 262
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K+ NH NI+ L N+ ++E +DV+IV + M+++L ++++ +
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +LFPG + DQ W +I L
Sbjct: 190 YYRAPEV-ILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH 191
+ +P +++PT +E+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVEN 262
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 135
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM--TGYVATRWY 193
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 135
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM--TGYVATRWY 193
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 136
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 194
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 238
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 112 bits (279), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 116/239 (48%), Gaps = 47/239 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I + K H NIVKL +++ + + +VF++++ DL KL+ G A++ Q+
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQL 109
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
G+ Y H + HRDLKP NLL+++ G +KI D G+ + +P Y V T WYR
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYR 167
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYG-----RW-- 167
AP+VL+ S+ +D W++G I EM++ LFPG + ADQ I++I G W
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227
Query: 168 ------------------------------VALISWLCSWNPRMRPTAAEALEHPFFRS 196
+ L+S + +P R TA +ALEH +F+
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 126
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 184
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 228
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 71 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 127
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 128 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 185
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 229
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 136
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 194
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 238
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 126
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 184
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 228
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 135
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 193
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 136
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 194
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 238
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 72 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 128
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 129 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 186
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 230
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 137
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 195
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 239
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 85 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 141
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 142 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEM--TGYVATRWY 199
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 243
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 132
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM--TGYVATRWY 190
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 234
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 25/216 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L ++++ +
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 190 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH-PFFRSCHFVPRSVP 205
+ P +++PT +E+ P + F P+ P
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTF-PKLFP 276
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 84 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 140
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 141 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 198
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 199 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 242
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 116/239 (48%), Gaps = 47/239 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I + K H NIVKL +++ + + +VF++++ DL KL+ G A++ Q+
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQL 109
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
G+ Y H + HRDLKP NLL+++ G +KI D G+ + +P Y V T WYR
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEVVTLWYR 167
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYG-----RW-- 167
AP+VL+ S+ +D W++G I EM++ LFPG + ADQ I++I G W
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPN 227
Query: 168 ------------------------------VALISWLCSWNPRMRPTAAEALEHPFFRS 196
+ L+S + +P R TA +ALEH +F+
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 142
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 200
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 244
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 132
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 190
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 234
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 142
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 200
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 244
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 86 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 142
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 143 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 200
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 201 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 244
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 71 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 127
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 128 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 185
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 186 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 229
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 97 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 153
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 154 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 211
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 255
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 132
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 190
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 234
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 93 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 149
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 150 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 207
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 251
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 79 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 135
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 136 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 193
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 194 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 80 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 136
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 137 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEM--TGYVATRWY 194
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 238
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 73 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 129
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 130 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 187
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 188 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 231
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 94 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 150
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 208
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 252
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 85 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 141
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 142 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 199
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 200 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 243
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 93 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 149
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 150 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 207
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 208 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 251
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 111 bits (278), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 76 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 132
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 133 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 190
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 191 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 234
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 94 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 150
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 208
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 252
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 111 bits (277), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 116/239 (48%), Gaps = 47/239 (19%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I + K H NIVKL +++ + + +VF++++ DL KL+ G A++ Q+
Sbjct: 51 ISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQL 109
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDY---VTTRWYR 117
G+ Y H + HRDLKP NLL+++ G +KI D G+ + +P Y + T WYR
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF--GIPVRKYTHEIVTLWYR 167
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYG-----RW-- 167
AP+VL+ S+ +D W++G I EM++ LFPG + ADQ I++I G W
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN 227
Query: 168 ------------------------------VALISWLCSWNPRMRPTAAEALEHPFFRS 196
+ L+S + +P R TA +ALEH +F+
Sbjct: 228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K+ NH NI+ L N+ ++E +DV+IV + M+++L ++++ +
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 130 YLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +LFPG + DQ W +I L
Sbjct: 190 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH 191
+ +P +++PT +E+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVEN 262
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 110/190 (57%), Gaps = 28/190 (14%)
Query: 1 MIFLRKMNNHPNIVKLRNLVK--EHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLC 58
++ L +++ H NIV L N+++ DV++VFDYME+DL +++ + + + + +
Sbjct: 59 IMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHK---QYVV 115
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGM------VKEIDSSLPC---- 107
+Q+ + + Y+H G HRD+KPSN+L++ +K+ D G+ ++ + +++P
Sbjct: 116 YQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINE 175
Query: 108 ------------TDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKN 155
TDYV TRWYRAPE+LL S +D W++G I+ E+L + +FPG +
Sbjct: 176 NTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSS 235
Query: 156 SADQIYKIYG 165
+ +Q+ +I G
Sbjct: 236 TMNQLERIIG 245
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 97/167 (58%), Gaps = 12/167 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 103 LLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 159
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 160 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 217
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
RAPE++L VD W++G IM E+L+ R LFPG + +Q+ +I
Sbjct: 218 RAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQI 264
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 110 bits (276), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L ++++ +
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ----MELDHERMS 122
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 123 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 182
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 183 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-------WNKVIEQL 234
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 235 GTPCPEFMKKLQPTVRNYVEN 255
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L ++++ +
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 190 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 242 GTPCPEFMKKLQPTVRNYVEN 262
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 25/216 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L ++++ +
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 190 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH-PFFRSCHFVPRSVP 205
+ P +++PT +E+ P + F P+ P
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTF-PKLFP 276
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K+ NH NI+ L N+ ++E +DV+IV + M+++L ++++ +
Sbjct: 74 LVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +LFPG + DQ W +I L
Sbjct: 190 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH 191
+ +P +++PT +E+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVEN 262
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/164 (38%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 117/216 (54%), Gaps = 25/216 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L ++++ +
Sbjct: 74 LVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 190 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH-PFFRSCHFVPRSVP 205
+ P +++PT +E+ P + F P+ P
Sbjct: 242 GTPCPEFMKKLQPTVRNYVENRPKYAGLTF-PKLFP 276
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 95/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K + ++D + L
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCA---KLTDDHVQFL 126
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T YV TRWY
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGYVATRWY 184
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 228
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L ++++ +
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMS 167
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 227
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 228 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-------WNKVIEQL 279
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 280 GTPCPEFMKKLQPTVRNYVEN 300
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV+IV + M+++L ++++ +
Sbjct: 79 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ----MELDHERMS 134
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 135 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 194
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 195 YYRAPEV-ILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ-------WNKVIEQL 246
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 247 GTPCPEFMKKLQPTVRTYVEN 267
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 97 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 153
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + YV TRWY
Sbjct: 154 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--XGYVATRWY 211
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 212 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 255
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 98/167 (58%), Gaps = 12/167 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ +++ +V++V M +DL ++K Q S++ + L
Sbjct: 80 LLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK---SQALSDEHVQFL 136
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H G HRDLKPSN+ V++ ++I D G+ ++ D + T YV TRWY
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM--TGYVATRWY 194
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
RAPE++L VD W++G IM E+L + LFPG + DQ+ +I
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV+IV + M+++L ++++ +
Sbjct: 68 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ----MELDHERMS 123
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 183
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 184 YYRAPEV-ILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ-------WNKVIEQL 235
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 236 GTPCPEFMKKLQPTVRTYVEN 256
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L ++++ +
Sbjct: 112 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMS 167
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 227
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 228 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-------WNKVIEQL 279
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 280 GTPCPEFMKKLQPTVRNYVEN 300
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 110/201 (54%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV+IV + M+++L ++++ +
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +LFPG + DQ W +I L
Sbjct: 190 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH 191
+ +P +++PT +E+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVEN 262
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L ++++ +
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMS 130
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 190
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 191 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-------WNKVIEQL 242
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 243 GTPCPEFMKKLQPTVRNYVEN 263
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L ++++ +
Sbjct: 75 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMS 130
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 190
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 191 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-------WNKVIEQL 242
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 243 GTPCPEFMKKLQPTVRNYVEN 263
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI G+ + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L ++++ +
Sbjct: 73 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMS 128
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 129 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 188
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 189 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-------WNKVIEQL 240
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 241 GTPCPEFMKKLQPTVRNYVEN 261
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L ++++ +
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 190 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 242 GTPCPEFMKKLQPTVRNYVEN 262
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L ++++ +
Sbjct: 74 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 190 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 242 GTPCPEFMKKLQPTVRNYVEN 262
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L ++++ +
Sbjct: 67 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMS 122
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 182
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 183 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-------WNKVIEQL 234
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 235 GTPCPEFMKKLQPTVRNYVEN 255
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 137
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + + T YV TRWY
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM--TGYVATRWY 195
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 239
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L ++++ +
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMS 123
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 183
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 184 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-------WNKVIEQL 235
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 236 GTPCPEFMKKLQPTVRNYVEN 256
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 137
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + + T YV TRWY
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM--TGYVATRWY 195
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 239
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L ++++ +
Sbjct: 68 LVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQ----MELDHERMS 123
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 183
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 184 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ-------WNKVIEQL 235
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 236 GTPCPEFMKKLQPTVRNYVEN 256
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 81 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 137
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + + T YV TRWY
Sbjct: 138 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEM--TGYVATRWY 195
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 239
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 108 bits (270), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + T V TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--TGXVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 70 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 126
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + +V TRWY
Sbjct: 127 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--AGFVATRWY 184
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 228
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + +V TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--AGFVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 108 bits (269), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + +V TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEM--AGFVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 98/167 (58%), Gaps = 12/167 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ +++ +V++V M +DL ++K Q S++ + L
Sbjct: 72 LLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK---CQALSDEHVQFL 128
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H G HRDLKPSN+ V++ ++I D G+ ++ D + T YV TRWY
Sbjct: 129 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEM--TGYVATRWY 186
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
RAPE++L VD W++G IM E+L + LFPG + DQ+ +I
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 233
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/164 (37%), Positives = 94/164 (57%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 130
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D + + D + T YV TRWY
Sbjct: 131 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEM--TGYVATRWY 188
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 189 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 108 bits (269), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 98/167 (58%), Gaps = 12/167 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ +++ +V++V M +DL ++K Q S++ + L
Sbjct: 80 LLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK---CQALSDEHVQFL 136
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H G HRDLKPSN+ V++ ++I D G+ ++ D + T YV TRWY
Sbjct: 137 VYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEM--TGYVATRWY 194
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
RAPE++L VD W++G IM E+L + LFPG + DQ+ +I
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRI 241
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 132/295 (44%), Gaps = 66/295 (22%)
Query: 2 IFLRKMNNHPNIVKLRNL-----VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARN 56
I + K H NI+ + N+ + +V+I+ + M++DL +++ + Q S+D +
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDHIQY 116
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLP--------- 106
+Q + + +H HRDLKPSNLL++ +K+ D G+ + ID S
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 107 --CTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY 164
T+YV TRWYRAPEV+L S +D W+ G I+ E+ R +FPG++ Q+ I+
Sbjct: 177 SGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF 236
Query: 165 G-------------------------------------------RWVALISWLCSWNPRM 181
G + + L+ + ++P
Sbjct: 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296
Query: 182 RPTAAEALEHPFFRSCH---FVPRSVPLLCNNFEAVAFPTATVTMQGRSLTYSQV 233
R TA EALEHP+ ++ H P P+ + FE + A T + L ++++
Sbjct: 297 RITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEI 351
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 107 bits (268), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 110/201 (54%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV+IV + M+++L ++++ +
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +LFPG + DQ W +I L
Sbjct: 190 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH 191
+ +P +++PT +E+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVEN 262
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 110/201 (54%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV+IV + M+++L ++++ +
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +LFPG + DQ W +I L
Sbjct: 190 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH 191
+ +P +++PT +E+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVEN 262
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 9/170 (5%)
Query: 3 FLRKMN--NHPNIVKLRNL-----VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
LR++ HPN+V+L ++ V +VF++++ DL + ++ + +
Sbjct: 64 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK 123
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
+L Q +GL ++H HRDLKP N+LV S G +K+ D G+ + + T V T
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTL 183
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY 164
WYRAPEVLL S P VD W++G I EM + LF G + ADQ+ KI+
Sbjct: 184 WYRAPEVLLQSTYATP-VDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 232
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 109/201 (54%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV+IV + M+++L ++++ +
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +LFPG + DQ W +I L
Sbjct: 190 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 242 GTPCPEFMKKLQPTVRTYVEN 262
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 109/201 (54%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV+IV + M+++L ++++ +
Sbjct: 75 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ----MELDHERMS 130
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T YV TR
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 190
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +LFPG + DQ W +I L
Sbjct: 191 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-------WNKVIEQL 242
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 243 GTPCPEFMKKLQPTVRTYVEN 263
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 93/164 (56%), Gaps = 12/164 (7%)
Query: 4 LRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L K H N++ L ++ ++E DV++V M +DL ++K Q ++D + L
Sbjct: 94 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFL 150
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
+Q+ +GL Y+H HRDLKPSNL V++ +KI D G+ + D + V TRWY
Sbjct: 151 IYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGX--VATRWY 208
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
RAPE++L VD W++G IM E+L+ R LFPG + DQ+
Sbjct: 209 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 252
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 45/232 (19%)
Query: 9 NHPNIVKLRNL-----VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQ 63
HPN+V+L ++ + +VF++++ DL + + + +++ FQ+ +
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 64 GLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVL 122
GL ++H HRDLKP N+LV S G IK+ D G+ + + T V T WYRAPEVL
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL 191
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-----------YGRWVAL- 170
L S P VD W++G I EM + LF G + DQ+ KI + R VAL
Sbjct: 192 LQSSYATP-VDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 250
Query: 171 ------------------ISWL--------CSWNPRMRPTAAEALEHPFFRS 196
I L ++NP R +A AL HP+F+
Sbjct: 251 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 108/231 (46%), Gaps = 45/231 (19%)
Query: 9 NHPNIVKLRNL-----VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQ 63
HPN+V+L ++ + +VF++++ DL + + + +++ FQ+ +
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 64 GLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVL 122
GL ++H HRDLKP N+LV S G IK+ D G+ + + T V T WYRAPEVL
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL 191
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-----------YGRWVAL- 170
L S P VD W++G I EM + LF G + DQ+ KI + R VAL
Sbjct: 192 LQSSYATP-VDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 250
Query: 171 ------------------ISWL--------CSWNPRMRPTAAEALEHPFFR 195
I L ++NP R +A AL HP+F+
Sbjct: 251 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 105 bits (263), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 108/232 (46%), Gaps = 45/232 (19%)
Query: 9 NHPNIVKLRNL-----VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQ 63
HPN+V+L ++ + +VF++++ DL + + + +++ FQ+ +
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 131
Query: 64 GLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVL 122
GL ++H HRDLKP N+LV S G IK+ D G+ + + T V T WYRAPEVL
Sbjct: 132 GLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVL 191
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-----------YGRWVAL- 170
L S P VD W++G I EM + LF G + DQ+ KI + R VAL
Sbjct: 192 LQSSYATP-VDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALP 250
Query: 171 ------------------ISWL--------CSWNPRMRPTAAEALEHPFFRS 196
I L ++NP R +A AL HP+F+
Sbjct: 251 RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 3 FLRKMN--NHPNIVKLRNL-----VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
LR++ HPN+V+L ++ V +VF++++ DL + ++ + +
Sbjct: 56 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK 115
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
+L Q +GL ++H HRDLKP N+LV S G +K+ D G+ + + V T
Sbjct: 116 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTL 175
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY 164
WYRAPEVLL S P VD W++G I EM + LF G + ADQ+ KI+
Sbjct: 176 WYRAPEVLLQSTYATP-VDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 224
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 131/295 (44%), Gaps = 66/295 (22%)
Query: 2 IFLRKMNNHPNIVKLRNL-----VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARN 56
I + K H NI+ + N+ + +V+I+ + M++DL +++ + Q S+D +
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDHIQY 116
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLP--------- 106
+Q + + +H HRDLKPSNLL++ +K+ D G+ + ID S
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 107 --CTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY 164
T+ V TRWYRAPEV+L S +D W+ G I+ E+ R +FPG++ Q+ I+
Sbjct: 177 SGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF 236
Query: 165 G-------------------------------------------RWVALISWLCSWNPRM 181
G + + L+ + ++P
Sbjct: 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296
Query: 182 RPTAAEALEHPFFRSCH---FVPRSVPLLCNNFEAVAFPTATVTMQGRSLTYSQV 233
R TA EALEHP+ ++ H P P+ + FE + A T + L ++++
Sbjct: 297 RITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEI 351
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 116/250 (46%), Gaps = 54/250 (21%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
+ L K H NI++L++++ + + ++F+Y E+DL K M ++ + S ++ +Q+
Sbjct: 84 VSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLYQL 141
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG------VIKIGDLGMVKEIDSSLPC---TDYVT 112
G+++ H + HRDLKP NLL+S V+KIGD G+ + +P T +
Sbjct: 142 INGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF--GIPIRQFTHEII 199
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY-------- 164
T WYR PE+LL S VD W++ I EML LFPG + DQ++KI+
Sbjct: 200 TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDD 259
Query: 165 GRW---VALISWLCSW------------------------------NPRMRPTAAEALEH 191
W AL W S+ +P R +A ALEH
Sbjct: 260 TTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEH 319
Query: 192 PFFRSCHFVP 201
P+F F P
Sbjct: 320 PYFSHNDFDP 329
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 131/295 (44%), Gaps = 66/295 (22%)
Query: 2 IFLRKMNNHPNIVKLRNL-----VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARN 56
I + K H NI+ + N+ + +V+I+ + M++DL +++ + Q S+D +
Sbjct: 60 IKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVI---STQMLSDDHIQY 116
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLP--------- 106
+Q + + +H HRDLKPSNLL++ +K+ D G+ + ID S
Sbjct: 117 FIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQ 176
Query: 107 --CTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY 164
++V TRWYRAPEV+L S +D W+ G I+ E+ R +FPG++ Q+ I+
Sbjct: 177 SGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIF 236
Query: 165 G-------------------------------------------RWVALISWLCSWNPRM 181
G + + L+ + ++P
Sbjct: 237 GIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296
Query: 182 RPTAAEALEHPFFRSCH---FVPRSVPLLCNNFEAVAFPTATVTMQGRSLTYSQV 233
R TA EALEHP+ ++ H P P+ + FE + A T + L ++++
Sbjct: 297 RITAKEALEHPYLQTYHDPNDEPEGEPIPPSFFEFDHYKEALTTKDLKKLIWNEI 351
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 3 FLRKMN--NHPNIVKLRNL-----VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
LR++ HPN+V+L ++ V +VF++++ DL + ++ + +
Sbjct: 56 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK 115
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
+L Q +GL ++H HRDLKP N+LV S G +K+ D G+ + + V T
Sbjct: 116 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTL 175
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY 164
WYRAPEVLL S P VD W++G I EM + LF G + ADQ+ KI+
Sbjct: 176 WYRAPEVLLQSTYATP-VDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 224
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 103 bits (258), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 9/170 (5%)
Query: 3 FLRKMN--NHPNIVKLRNL-----VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
LR++ HPN+V+L ++ V +VF++++ DL + ++ + +
Sbjct: 56 LLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK 115
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
+L Q +GL ++H HRDLKP N+LV S G +K+ D G+ + + V T
Sbjct: 116 DLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTL 175
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY 164
WYRAPEVLL S P VD W++G I EM + LF G + ADQ+ KI+
Sbjct: 176 WYRAPEVLLQSTYATP-VDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIF 224
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 109/201 (54%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV+IV + M+++L ++++ +
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S V TR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV+L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 190 YYRAPEVIL-GMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 242 GTPCPEFMKKLQPTVRTYVEN 262
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 109/201 (54%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV+IV + M+++L ++++ +
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S V TR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV+L VD W++G IM EM+ +ILFPG++ DQ W +I L
Sbjct: 190 YYRAPEVIL-GMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 242 GTPCPAFMKKLQPTVRNYVEN 262
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 113/236 (47%), Gaps = 44/236 (18%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K H NIV+L +++ + + +VF++ + DL K +S + + ++ FQ+
Sbjct: 52 ICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYF-DSCNGDLDPEIVKSFLFQL 110
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPC-TDYVTTRWYRAP 119
+GL + H + HRDLKP NLL+++ G +K+ D G+ + + C + V T WYR P
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPP 170
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEML-SFRILFPGKNSADQIYKIY--------GRWVA- 169
+VL +++ +D W+ G I E+ + R LFPG + DQ+ +I+ +W +
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM 230
Query: 170 -------------------------------LISWLCSWNPRMRPTAAEALEHPFF 194
L+ L NP R +A EAL+HP+F
Sbjct: 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/201 (32%), Positives = 108/201 (53%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV+IV + M+++L ++++ +
Sbjct: 76 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ----MELDHERMS 131
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S +V TR
Sbjct: 132 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTR 191
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +LFPG + DQ W +I L
Sbjct: 192 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-------WNKVIEQL 243
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 244 GTPCPEFMKKLQPTVRTYVEN 264
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 108/201 (53%), Gaps = 23/201 (11%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV+IV + M+++L ++++ +
Sbjct: 74 LVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQ----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + +S T V TR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL 174
+YRAPEV +L VD W++G IM EM+ +LFPG + DQ W +I L
Sbjct: 190 YYRAPEV-ILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ-------WNKVIEQL 241
Query: 175 CSWNP----RMRPTAAEALEH 191
+ P +++PT +E+
Sbjct: 242 GTPCPEFMKKLQPTVRTYVEN 262
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 93/164 (56%), Gaps = 3/164 (1%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I + K HPN+V L + + + +VF+Y + +L + + + E +++ +Q
Sbjct: 53 IRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHEL-DRYQRGVPEHLVKSITWQT 111
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDS-SLPCTDYVTTRWYRAP 119
Q +++ H+ HRD+KP N+L++K VIK+ D G + + S D V TRWYR+P
Sbjct: 112 LQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSP 171
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
E+L+ GP VD WA+G + E+LS L+PGK+ DQ+Y I
Sbjct: 172 ELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLI 215
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 113/236 (47%), Gaps = 44/236 (18%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K H NIV+L +++ + + +VF++ + DL K +S + + ++ FQ+
Sbjct: 52 ICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYF-DSCNGDLDPEIVKSFLFQL 110
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPC-TDYVTTRWYRAP 119
+GL + H + HRDLKP NLL+++ G +K+ + G+ + + C + V T WYR P
Sbjct: 111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPP 170
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEML-SFRILFPGKNSADQIYKIY--------GRWVA- 169
+VL +++ +D W+ G I E+ + R LFPG + DQ+ +I+ +W +
Sbjct: 171 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSM 230
Query: 170 -------------------------------LISWLCSWNPRMRPTAAEALEHPFF 194
L+ L NP R +A EAL+HP+F
Sbjct: 231 TKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYF 286
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 88/164 (53%), Gaps = 3/164 (1%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K H N+V L + K+ + ++VF++++ +L + E + FQ+
Sbjct: 75 IKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDL-ELFPNGLDYQVVQKYLFQI 133
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPC-TDYVTTRWYRAP 119
G+ + H HRD+KP N+LVS+ GV+K+ D G + + + D V TRWYRAP
Sbjct: 134 INGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAP 193
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
E+L+ G VD WA+G ++ EM LFPG + DQ+Y I
Sbjct: 194 ELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHI 237
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L +++ +
Sbjct: 72 LVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIH----MELDHERMS 127
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + ++ T YV TR
Sbjct: 128 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTR 187
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
+YRAPEV +L VD W++G IM E++ ++F G + DQ K+
Sbjct: 188 YYRAPEV-ILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKV 235
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 19/169 (11%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHED--VFIVFDYMESDLLKLMKESAGQNFSEDEA---- 54
+ LR++ HPN++ L+ + H D V+++FDY E DL ++K ++
Sbjct: 69 IALLRELK-HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPR 127
Query: 55 ---RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-----SKGVIKIGDLGMVKEIDSSL- 105
++L +Q+ G+HY+H HRDLKP+N+LV +G +KI D+G + +S L
Sbjct: 128 GMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK 187
Query: 106 PCTDY---VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILF 151
P D V T WYRAPE+LL + +D WA+G I E+L+ +F
Sbjct: 188 PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 65/259 (25%)
Query: 9 NHPNIVKLRNLV--------------KEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEA 54
+H NIVK+ ++ E V+IV +YME+DL ++++ E+ A
Sbjct: 66 DHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGP---LLEEHA 122
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLP----CT 108
R +Q+ +GL Y+H HRDLKP+NL ++ V+KIGD G+ + +D +
Sbjct: 123 RLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLS 182
Query: 109 DYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ--------- 159
+ + T+WYR+P +LL +D WA G I EML+ + LF G + +Q
Sbjct: 183 EGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP 242
Query: 160 ------------IYKIYGR--------------------WVALISWLCSWNPRMRPTAAE 187
+ +Y R V + + +++P R TA E
Sbjct: 243 VVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEE 302
Query: 188 ALEHPFFRSCHFVPRSVPL 206
AL HP+ S + P P+
Sbjct: 303 ALSHPYM-SIYSFPMDEPI 320
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 106/237 (44%), Gaps = 50/237 (21%)
Query: 9 NHPNIVKLRNLVKEHED-----VFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQ 63
+HPNI+ LR++ E+ +++V + M +DL +++ + S + + +
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV-ISPQHIQYFMYHILL 145
Query: 64 GLHYMHRQGYFHRDLKPSN-LLVSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVL 122
GLH +H G HRDL P N LL I I D + +E + T YVT RWYRAPE++
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELV 205
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI------------------- 163
+ + VD W+ G +M EM + + LF G +Q+ KI
Sbjct: 206 MQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPS 265
Query: 164 ---YGR----------WVA-----------LISWLCSWNPRMRPTAAEALEHPFFRS 196
Y R W A LI+ + +NP+ R + +AL HP+F S
Sbjct: 266 ARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFES 322
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 106/237 (44%), Gaps = 50/237 (21%)
Query: 9 NHPNIVKLRNLVKEHED-----VFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQ 63
+HPNI+ LR++ E+ +++V + M +DL +++ + S + + +
Sbjct: 87 HHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIV-ISPQHIQYFMYHILL 145
Query: 64 GLHYMHRQGYFHRDLKPSN-LLVSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVL 122
GLH +H G HRDL P N LL I I D + +E + T YVT RWYRAPE++
Sbjct: 146 GLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELV 205
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI------------------- 163
+ + VD W+ G +M EM + + LF G +Q+ KI
Sbjct: 206 MQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPS 265
Query: 164 ---YGR----------WVA-----------LISWLCSWNPRMRPTAAEALEHPFFRS 196
Y R W A LI+ + +NP+ R + +AL HP+F S
Sbjct: 266 ARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFES 322
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 95/169 (56%), Gaps = 12/169 (7%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEAR 55
+ L K NH NI+ L N+ ++E +DV++V + M+++L +++ +
Sbjct: 74 LVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIH----MELDHERMS 129
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L +Q+ G+ ++H G HRDLKPSN++V S +KI D G+ + ++ T YV TR
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTR 189
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
+YRAPEV+L VD W++G IM E++ ++F G + DQ K+
Sbjct: 190 YYRAPEVILGMGYAA-NVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKV 237
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 111/216 (51%), Gaps = 31/216 (14%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFD-YMESDLL-KLMKESAGQNFSEDEARNLCFQ 60
L+K++ HPNI+KL ++++ +IV + Y +L +++K + FSE +A + Q
Sbjct: 74 LLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQ 129
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVSKGV----IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
VF G+ YMH+ HRDLKP N+L+ IKI D G+ + D + T +Y
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 117 RAPEVL--LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-YGRWV----- 168
APEVL E C D W+ G I++ +LS F GKN D + ++ G++
Sbjct: 190 IAPEVLRGTYDEKC----DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQ 245
Query: 169 ---------ALISWLCSWNPRMRPTAAEALEHPFFR 195
LI + +++P +R TA + LEHP+ +
Sbjct: 246 WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 111/216 (51%), Gaps = 31/216 (14%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFD-YMESDLL-KLMKESAGQNFSEDEARNLCFQ 60
L+K++ HPNI+KL ++++ +IV + Y +L +++K + FSE +A + Q
Sbjct: 74 LLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQ 129
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVSKGV----IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
VF G+ YMH+ HRDLKP N+L+ IKI D G+ + D + T +Y
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 117 RAPEVL--LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-YGRWV----- 168
APEVL E C D W+ G I++ +LS F GKN D + ++ G++
Sbjct: 190 IAPEVLRGTYDEKC----DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQ 245
Query: 169 ---------ALISWLCSWNPRMRPTAAEALEHPFFR 195
LI + +++P +R TA + LEHP+ +
Sbjct: 246 WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 111/216 (51%), Gaps = 31/216 (14%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFD-YMESDLL-KLMKESAGQNFSEDEARNLCFQ 60
L+K++ HPNI+KL ++++ +IV + Y +L +++K + FSE +A + Q
Sbjct: 74 LLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR---KRFSEHDAARIIKQ 129
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVSKGV----IKIGDLGMVKEIDSSLPCTDYVTTRWY 116
VF G+ YMH+ HRDLKP N+L+ IKI D G+ + D + T +Y
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYY 189
Query: 117 RAPEVL--LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-YGRWV----- 168
APEVL E C D W+ G I++ +LS F GKN D + ++ G++
Sbjct: 190 IAPEVLRGTYDEKC----DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQ 245
Query: 169 ---------ALISWLCSWNPRMRPTAAEALEHPFFR 195
LI + +++P +R TA + LEHP+ +
Sbjct: 246 WRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 71 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 129
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P Y+
Sbjct: 130 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 189
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 190 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 249
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 250 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 309
Query: 193 FF 194
FF
Sbjct: 310 FF 311
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 100 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 158
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P Y+
Sbjct: 159 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 218
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 278
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 279 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338
Query: 193 FF 194
FF
Sbjct: 339 FF 340
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 94 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 152
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P Y+
Sbjct: 153 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 212
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 213 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 272
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 273 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 332
Query: 193 FF 194
FF
Sbjct: 333 FF 334
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 104 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 162
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P Y+
Sbjct: 163 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 222
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 223 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 282
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 283 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 342
Query: 193 FF 194
FF
Sbjct: 343 FF 344
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 102 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 160
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P Y+
Sbjct: 161 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 220
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 221 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 280
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 281 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 340
Query: 193 FF 194
FF
Sbjct: 341 FF 342
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 145 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 203
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P Y+
Sbjct: 204 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 263
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 264 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 323
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 324 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 383
Query: 193 FF 194
FF
Sbjct: 384 FF 385
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 66 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P Y+
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 245 EQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 193 FF 194
FF
Sbjct: 305 FF 306
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 66 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P Y+
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 245 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 193 FF 194
FF
Sbjct: 305 FF 306
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 66 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P Y+
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 184
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 245 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 193 FF 194
FF
Sbjct: 305 FF 306
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 91.3 bits (225), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 110/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 79 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 137
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P Y+
Sbjct: 138 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC 197
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 198 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 257
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 258 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 317
Query: 193 FF 194
FF
Sbjct: 318 FF 319
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 50/239 (20%)
Query: 6 KMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMKESAG--QNFSEDEARNL 57
++ HPN+V L+ + ++VF+ V +Y+ + + + A Q +
Sbjct: 87 RIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLY 146
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+Q+ + L Y+H G HRD+KP NLL+ GV+K+ D G K + + P + +R+
Sbjct: 147 MYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY 206
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR------ 166
YRAPE++ + +D W+ G +M E++ + LFPG++ DQ I K+ G
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266
Query: 167 -------------------------------WVALISWLCSWNPRMRPTAAEALEHPFF 194
+ LIS L + P R TA EAL HPFF
Sbjct: 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFF 325
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 16/200 (8%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPNIV+ R +E+ ++IV DY E DL K + G F ED+ + Q+ L ++
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 69 HRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDY-VTTRWYRAPEVLLLSE 126
H + HRD+K N+ ++K G +++GD G+ + ++S++ + T +Y +PE+ ++
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEI-CENK 200
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV------------ALISWL 174
+ D WA+G +++E+ + + F + + + KI +L+S L
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHYSYDLRSLVSQL 260
Query: 175 CSWNPRMRPTAAEALEHPFF 194
NPR RP+ LE F
Sbjct: 261 FKRNPRDRPSVNSILEKGFI 280
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 24/214 (11%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVF 62
LRK++ HPNI++L++ + + F+VFD M + +L + E SE E R + +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALL 134
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
+ + +H+ HRDLKP N+L+ + IK+ D G ++D + T Y APE+
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 194
Query: 122 LLLS-----EICGPEVDRWAMGAIMF-------------EMLSFRILFPGKNS-ADQIYK 162
+ S G EVD W+ G IM+ +ML R++ G +
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD 254
Query: 163 IYGRWVA-LISWLCSWNPRMRPTAAEALEHPFFR 195
Y V L+S P+ R TA EAL HPFF+
Sbjct: 255 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 24/214 (11%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVF 62
LRK++ HPNI++L++ + + F+VFD M + +L + E SE E R + +
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALL 121
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
+ + +H+ HRDLKP N+L+ + IK+ D G ++D + T Y APE+
Sbjct: 122 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEI 181
Query: 122 LLLS-----EICGPEVDRWAMGAIMF-------------EMLSFRILFPGKNS-ADQIYK 162
+ S G EVD W+ G IM+ +ML R++ G +
Sbjct: 182 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD 241
Query: 163 IYGRWVA-LISWLCSWNPRMRPTAAEALEHPFFR 195
Y V L+S P+ R TA EAL HPFF+
Sbjct: 242 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 107/242 (44%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV---KEHEDVF---IVFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR E +DV +V DY+ + ++ + A Q
Sbjct: 66 IMRKLD-HCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P +
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 245 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 193 FF 194
FF
Sbjct: 305 FF 306
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + + ++ + A Q
Sbjct: 66 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYV 124
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P +
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 245 EQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 193 FF 194
FF
Sbjct: 305 FF 306
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 16/166 (9%)
Query: 26 VFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLV 85
+++VFD+ E DL L+ + F+ E + + + GL+Y+HR HRD+K +N+L+
Sbjct: 100 IYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 158
Query: 86 SK-GVIKIGDLGMVKEID---SSLP--CTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGA 139
++ GV+K+ D G+ + +S P + V T WYR PE+LL GP +D W G
Sbjct: 159 TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 218
Query: 140 IMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLC-SWNPRMRPT 184
IM EM + + G Q+ ALIS LC S P + P
Sbjct: 219 IMAEMWTRSPIMQGNTEQHQL--------ALISQLCGSITPEVWPN 256
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVF 62
LRK++ HPNI++L++ + + F+VFD M + +L + E SE E R + +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALL 134
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
+ + +H+ HRDLKP N+L+ + IK+ D G ++D T Y APE+
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEI 194
Query: 122 LLLS-----EICGPEVDRWAMGAIMF-------------EMLSFRILFPGKNS-ADQIYK 162
+ S G EVD W+ G IM+ +ML R++ G +
Sbjct: 195 IECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWD 254
Query: 163 IYGRWVA-LISWLCSWNPRMRPTAAEALEHPFFR 195
Y V L+S P+ R TA EAL HPFF+
Sbjct: 255 DYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 100 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 158
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P +
Sbjct: 159 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 218
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 219 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 278
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 279 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 338
Query: 193 FF 194
FF
Sbjct: 339 FF 340
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 26 VFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLV 85
+++VFD+ E DL L+ + F+ E + + + GL+Y+HR HRD+K +N+L+
Sbjct: 99 IYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 157
Query: 86 SK-GVIKIGDLGMVKEID---SSLP--CTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGA 139
++ GV+K+ D G+ + +S P + V T WYR PE+LL GP +D W G
Sbjct: 158 TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 217
Query: 140 IMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLC-SWNPRMRPTA 185
IM EM + + G Q+ ALIS LC S P + P
Sbjct: 218 IMAEMWTRSPIMQGNTEQHQL--------ALISQLCGSITPEVWPNV 256
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 24/199 (12%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHED--------VFIVFDYMESDLLKLMKESAGQNFSEDE 53
I + ++ H N+V L + + +++VFD+ E DL L+ + F+ E
Sbjct: 68 IKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK-FTLSE 126
Query: 54 ARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEID---SSLP--C 107
+ + + GL+Y+HR HRD+K +N+L+++ GV+K+ D G+ + +S P
Sbjct: 127 IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 108 TDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRW 167
+ V T WYR PE+LL GP +D W G IM EM + + G Q+
Sbjct: 187 XNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL------- 239
Query: 168 VALISWLC-SWNPRMRPTA 185
ALIS LC S P + P
Sbjct: 240 -ALISQLCGSITPEVWPNV 257
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 16/167 (9%)
Query: 26 VFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLV 85
+++VFD+ E DL L+ + F+ E + + + GL+Y+HR HRD+K +N+L+
Sbjct: 100 IYLVFDFCEHDLAGLL-SNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 158
Query: 86 SK-GVIKIGDLGMVKEID---SSLP--CTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGA 139
++ GV+K+ D G+ + +S P + V T WYR PE+LL GP +D W G
Sbjct: 159 TRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGC 218
Query: 140 IMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLC-SWNPRMRPTA 185
IM EM + + G Q+ ALIS LC S P + P
Sbjct: 219 IMAEMWTRSPIMQGNTEQHQL--------ALISQLCGSITPEVWPNV 257
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 85 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 143
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P +
Sbjct: 144 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 203
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 204 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 263
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 264 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 323
Query: 193 FF 194
FF
Sbjct: 324 FF 325
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
HP+I+KL +++K +++ +V +Y ++L + + SE EAR Q+ + Y H
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCH 130
Query: 70 RQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEIC 128
R HRDLKP NLL+ + + +KI D G+ + + Y APEV+
Sbjct: 131 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 190
Query: 129 GPEVDRWAMGAIMFEMLSFRILFPG-------KNSADQIYK----IYGRWVALISWLCSW 177
GPEVD W+ G I++ ML R+ F KN ++ +Y + LI +
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 250
Query: 178 NPRMRPTAAEALEHPFFR 195
NP R + E ++ +F+
Sbjct: 251 NPLNRISIHEIMQDDWFK 268
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 67 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 125
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P +
Sbjct: 126 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 185
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 186 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 245
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 246 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 305
Query: 193 FF 194
FF
Sbjct: 306 FF 307
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 78 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 136
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P +
Sbjct: 137 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 196
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 256
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 257 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 316
Query: 193 FF 194
FF
Sbjct: 317 FF 318
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 66 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P +
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 245 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 193 FF 194
FF
Sbjct: 305 FF 306
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 66 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 124
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P +
Sbjct: 125 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 184
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 245 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 304
Query: 193 FF 194
FF
Sbjct: 305 FF 306
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 78 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 136
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P +
Sbjct: 137 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 196
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 197 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 256
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 257 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 316
Query: 193 FF 194
FF
Sbjct: 317 FF 318
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 74 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 132
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P +
Sbjct: 133 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 192
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 193 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 252
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 253 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 312
Query: 193 FF 194
FF
Sbjct: 313 FF 314
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
HP+I+KL +++K +++ +V +Y ++L + + SE EAR Q+ + Y H
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCH 124
Query: 70 RQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEIC 128
R HRDLKP NLL+ + + +KI D G+ + + Y APEV+
Sbjct: 125 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 184
Query: 129 GPEVDRWAMGAIMFEMLSFRILFPG-------KNSADQIYK----IYGRWVALISWLCSW 177
GPEVD W+ G I++ ML R+ F KN ++ +Y + LI +
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 244
Query: 178 NPRMRPTAAEALEHPFFR 195
NP R + E ++ +F+
Sbjct: 245 NPLNRISIHEIMQDDWFK 262
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
HP+I+KL +++K +++ +V +Y ++L + + SE EAR Q+ + Y H
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCH 129
Query: 70 RQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEIC 128
R HRDLKP NLL+ + + +KI D G+ + + Y APEV+
Sbjct: 130 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 189
Query: 129 GPEVDRWAMGAIMFEMLSFRILFPG-------KNSADQIYK----IYGRWVALISWLCSW 177
GPEVD W+ G I++ ML R+ F KN ++ +Y + LI +
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 249
Query: 178 NPRMRPTAAEALEHPFFR 195
NP R + E ++ +F+
Sbjct: 250 NPLNRISIHEIMQDDWFK 267
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 109/242 (45%), Gaps = 51/242 (21%)
Query: 3 FLRKMNNHPNIVKLRNLV----KEHEDVFI--VFDYMESDLLKLMK--ESAGQNFSEDEA 54
+RK++ H NIV+LR ++ ++V++ V DY+ + ++ + A Q
Sbjct: 70 IMRKLD-HCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYV 128
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT 112
+ +Q+F+ L Y+H G HRD+KP NLL+ V+K+ D G K++ P +
Sbjct: 129 KLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC 188
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ---IYKIYGR--- 166
+R+YRAPE++ + +D W+ G ++ E+L + +FPG + DQ I K+ G
Sbjct: 189 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 248
Query: 167 ----------------------W------------VALISWLCSWNPRMRPTAAEALEHP 192
W +AL S L + P R T EA H
Sbjct: 249 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHS 308
Query: 193 FF 194
FF
Sbjct: 309 FF 310
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
HP+I+KL +++K +++ +V +Y ++L + + SE EAR Q+ + Y H
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCH 120
Query: 70 RQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEIC 128
R HRDLKP NLL+ + + +KI D G+ + + Y APEV+
Sbjct: 121 RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYA 180
Query: 129 GPEVDRWAMGAIMFEMLSFRILFPG-------KNSADQIYK----IYGRWVALISWLCSW 177
GPEVD W+ G I++ ML R+ F KN ++ +Y + LI +
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIV 240
Query: 178 NPRMRPTAAEALEHPFFR 195
NP R + E ++ +F+
Sbjct: 241 NPLNRISIHEIMQDDWFK 258
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 112/230 (48%), Gaps = 30/230 (13%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFD-YMESDLLKLMKESAGQNFSEDEARNLCFQVF 62
L K +HPNI+KL ++ ++V + Y +L + + + FSE +A + QV
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI--ISRKRFSEVDAARIIRQVL 159
Query: 63 QGLHYMHRQGYFHRDLKPSNLLV---SKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRA 118
G+ YMH+ HRDLKP NLL+ SK I+I D G+ ++S D + T +Y A
Sbjct: 160 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 219
Query: 119 PEVL--LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-YGRWV------- 168
PEVL E C D W+ G I++ +LS F G N D + K+ G++
Sbjct: 220 PEVLHGTYDEKC----DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 275
Query: 169 -------ALISWLCSWNPRMRPTAAEALEHPFFRSC--HFVPRSVPLLCN 209
LI + ++ P MR +A +AL+H + ++ + VP L N
Sbjct: 276 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDN 325
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 112/230 (48%), Gaps = 30/230 (13%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFD-YMESDLLKLMKESAGQNFSEDEARNLCFQVF 62
L K +HPNI+KL ++ ++V + Y +L + + + FSE +A + QV
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI--ISRKRFSEVDAARIIRQVL 160
Query: 63 QGLHYMHRQGYFHRDLKPSNLLV---SKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRA 118
G+ YMH+ HRDLKP NLL+ SK I+I D G+ ++S D + T +Y A
Sbjct: 161 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 220
Query: 119 PEVL--LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-YGRWV------- 168
PEVL E C D W+ G I++ +LS F G N D + K+ G++
Sbjct: 221 PEVLHGTYDEKC----DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 276
Query: 169 -------ALISWLCSWNPRMRPTAAEALEHPFFRSC--HFVPRSVPLLCN 209
LI + ++ P MR +A +AL+H + ++ + VP L N
Sbjct: 277 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDN 326
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/230 (31%), Positives = 112/230 (48%), Gaps = 30/230 (13%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFD-YMESDLLKLMKESAGQNFSEDEARNLCFQVF 62
L K +HPNI+KL ++ ++V + Y +L + + + FSE +A + QV
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI--ISRKRFSEVDAARIIRQVL 136
Query: 63 QGLHYMHRQGYFHRDLKPSNLLV---SKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRA 118
G+ YMH+ HRDLKP NLL+ SK I+I D G+ ++S D + T +Y A
Sbjct: 137 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 196
Query: 119 PEVL--LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-YGRWV------- 168
PEVL E C D W+ G I++ +LS F G N D + K+ G++
Sbjct: 197 PEVLHGTYDEKC----DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 252
Query: 169 -------ALISWLCSWNPRMRPTAAEALEHPFFRSC--HFVPRSVPLLCN 209
LI + ++ P MR +A +AL+H + ++ + VP L N
Sbjct: 253 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDN 302
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 107/215 (49%), Gaps = 28/215 (13%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFD-YMESDLLKLMKESAGQNFSEDEARNLCFQVF 62
L K +HPNI+KL ++ ++V + Y +L + + + FSE +A + QV
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEI--ISRKRFSEVDAARIIRQVL 142
Query: 63 QGLHYMHRQGYFHRDLKPSNLLV---SKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRA 118
G+ YMH+ HRDLKP NLL+ SK I+I D G+ ++S D + T +Y A
Sbjct: 143 SGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIA 202
Query: 119 PEVL--LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-YGRWV------- 168
PEVL E C D W+ G I++ +LS F G N D + K+ G++
Sbjct: 203 PEVLHGTYDEKC----DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 258
Query: 169 -------ALISWLCSWNPRMRPTAAEALEHPFFRS 196
LI + ++ P MR +A +AL+H + ++
Sbjct: 259 KVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 293
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVF 62
L+K+N HP I+K++N + ED +IV + ME L K + E + +Q+
Sbjct: 68 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGEL-FDKVVGNKRLKEATCKLYFYQML 124
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKG----VIKIGDLGMVKEIDSSLPCTDYVTTRWYRA 118
+ Y+H G HRDLKP N+L+S +IKI D G K + + T Y A
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 119 PEVLLLSEICG--PEVDRWAMGAIMFEMLSFRILFPGKNS----ADQIY----------- 161
PEVL+ G VD W++G I+F LS F + DQI
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 162 -KIYGRWVALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVAFP 217
++ + + L+ L +P+ R T EAL HP+ + + LL E+ A P
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALP 301
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVF 62
L+K+N HP I+K++N + ED +IV + ME L K + E + +Q+
Sbjct: 68 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGEL-FDKVVGNKRLKEATCKLYFYQML 124
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKG----VIKIGDLGMVKEIDSSLPCTDYVTTRWYRA 118
+ Y+H G HRDLKP N+L+S +IKI D G K + + T Y A
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 119 PEVLLLSEICG--PEVDRWAMGAIMFEMLSFRILFPGKNS----ADQIY----------- 161
PEVL+ G VD W++G I+F LS F + DQI
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 162 -KIYGRWVALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVAFP 217
++ + + L+ L +P+ R T EAL HP+ + + LL E+ A P
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALP 301
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVF 62
L+K+N HP I+K++N + ED +IV + ME L K + E + +Q+
Sbjct: 74 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGEL-FDKVVGNKRLKEATCKLYFYQML 130
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKG----VIKIGDLGMVKEIDSSLPCTDYVTTRWYRA 118
+ Y+H G HRDLKP N+L+S +IKI D G K + + T Y A
Sbjct: 131 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 190
Query: 119 PEVLLLSEICG--PEVDRWAMGAIMFEMLSFRILFPGKNS----ADQIY----------- 161
PEVL+ G VD W++G I+F LS F + DQI
Sbjct: 191 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 250
Query: 162 -KIYGRWVALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVAFP 217
++ + + L+ L +P+ R T EAL HP+ + + LL E+ A P
Sbjct: 251 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALP 307
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVF 62
L+K+N HP I+K++N + ED +IV + ME L K + E + +Q+
Sbjct: 67 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGEL-FDKVVGNKRLKEATCKLYFYQML 123
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKG----VIKIGDLGMVKEIDSSLPCTDYVTTRWYRA 118
+ Y+H G HRDLKP N+L+S +IKI D G K + + T Y A
Sbjct: 124 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 183
Query: 119 PEVLLLSEICG--PEVDRWAMGAIMFEMLSFRILFPGKNS----ADQIY----------- 161
PEVL+ G VD W++G I+F LS F + DQI
Sbjct: 184 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 243
Query: 162 -KIYGRWVALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVAFP 217
++ + + L+ L +P+ R T EAL HP+ + + LL E+ A P
Sbjct: 244 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALP 300
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 101/214 (47%), Gaps = 24/214 (11%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQV 61
LR++ HP+I+ L + + +F+VFD M + +L + E SE E R++ +
Sbjct: 152 ILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA--LSEKETRSIMRSL 209
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPE 120
+ + ++H HRDLKP N+L+ + I++ D G ++ + T Y APE
Sbjct: 210 LEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPE 269
Query: 121 VLLLS-----EICGPEVDRWAMGAIMFEMLS-------------FRILFPGKN--SADQI 160
+L S G EVD WA G I+F +L+ R++ G+ S+ +
Sbjct: 270 ILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEW 329
Query: 161 YKIYGRWVALISWLCSWNPRMRPTAAEALEHPFF 194
LIS L +P R TA +AL+HPFF
Sbjct: 330 DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 44/211 (20%)
Query: 28 IVFDYMESDLLKLMKE--SAGQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLV 85
++ +Y+ L K++K +G++ + +Q+F+ + ++H G HRD+KP NLLV
Sbjct: 115 VIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLV 174
Query: 86 SK--GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFE 143
+ +K+ D G K++ S P + +R+YRAPE++L + P +D W++G + E
Sbjct: 175 NSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVFGE 234
Query: 144 MLSFRILFPGKNSADQIYKIY----------------------------GRW-------- 167
++ + LF G+ S DQ+ +I W
Sbjct: 235 LILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGT 294
Query: 168 ----VALISWLCSWNPRMRPTAAEALEHPFF 194
+ L+ + + P +R EA+ HPFF
Sbjct: 295 PSLAIDLLEQILRYEPDLRINPYEAMAHPFF 325
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVF 62
L+K+N HP I+K++N + ED +IV + ME L K + E + +Q+
Sbjct: 68 ILKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGEL-FDKVVGNKRLKEATCKLYFYQML 124
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKG----VIKIGDLGMVKEIDSSLPCTDYVTTRWYRA 118
+ Y+H G HRDLKP N+L+S +IKI D G K + + T Y A
Sbjct: 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLA 184
Query: 119 PEVLLLSEICG--PEVDRWAMGAIMFEMLSFRILFPGKNS----ADQIY----------- 161
PEVL+ G VD W++G I+F LS F + DQI
Sbjct: 185 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW 244
Query: 162 -KIYGRWVALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVAFP 217
++ + + L+ L +P+ R T EAL HP+ + + LL E+ A P
Sbjct: 245 AEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTAKP 301
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 106/236 (44%), Gaps = 25/236 (10%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQ 63
L+K+N HP I+K++N + ED +IV + ME L K + E + +Q+
Sbjct: 208 LKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGEL-FDKVVGNKRLKEATCKLYFYQMLL 264
Query: 64 GLHYMHRQGYFHRDLKPSNLLVSKG----VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ Y+H G HRDLKP N+L+S +IKI D G K + + T Y AP
Sbjct: 265 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 324
Query: 120 EVLLLSEICG--PEVDRWAMGAIMFEMLSFRILFPGKNS----ADQIY------------ 161
EVL+ G VD W++G I+F LS F + DQI
Sbjct: 325 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 384
Query: 162 KIYGRWVALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVAFP 217
++ + + L+ L +P+ R T EAL HP+ + + LL E+ A P
Sbjct: 385 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLLSEENESTALP 440
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 88/172 (51%), Gaps = 36/172 (20%)
Query: 9 NHPNIVKLRNLV-----KEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQ 63
NH ++VK+ ++V ++ +++++V + +SD KL + +E + L + +
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV--YLTELHIKTLLYNLLV 167
Query: 64 GLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEID------SSLPC--------- 107
G+ Y+H G HRDLKP+N LV++ +K+ D G+ + +D S LP
Sbjct: 168 GVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNL 227
Query: 108 -------------TDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS 146
T +V TRWYRAPE++LL E +D W++G I E+L+
Sbjct: 228 VTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 25/221 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H N+V++ N +++++V +++E L + N E++ +C V Q L +
Sbjct: 84 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN--EEQIAAVCLAVLQALSVL 141
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTD-YVTTRWYRAPEVLLLSE 126
H QG HRD+K ++L++ G +K+ D G ++ +P V T ++ APE L+S
Sbjct: 142 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE--LISR 199
Query: 127 I-CGPEVDRWAMGAIMFEMLS----------------FRILFPGKNSADQIYKIYGRWVA 169
+ GPEVD W++G ++ EM+ R P + ++K+
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR--LKNLHKVSPSLKG 257
Query: 170 LISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNN 210
+ L +P R TAAE L+HPF VPL+ N
Sbjct: 258 FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQN 298
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 25/221 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H N+V++ N +++++V +++E L + N E++ +C V Q L +
Sbjct: 86 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN--EEQIAAVCLAVLQALSVL 143
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTD-YVTTRWYRAPEVLLLSE 126
H QG HRD+K ++L++ G +K+ D G ++ +P V T ++ APE L+S
Sbjct: 144 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE--LISR 201
Query: 127 I-CGPEVDRWAMGAIMFEMLS----------------FRILFPGKNSADQIYKIYGRWVA 169
+ GPEVD W++G ++ EM+ R P + ++K+
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR--LKNLHKVSPSLKG 259
Query: 170 LISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNN 210
+ L +P R TAAE L+HPF VPL+ N
Sbjct: 260 FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQN 300
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 25/221 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H N+V++ N +++++V +++E L + N E++ +C V Q L +
Sbjct: 75 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN--EEQIAAVCLAVLQALSVL 132
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTD-YVTTRWYRAPEVLLLSE 126
H QG HRD+K ++L++ G +K+ D G ++ +P V T ++ APE L+S
Sbjct: 133 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE--LISR 190
Query: 127 I-CGPEVDRWAMGAIMFEMLS----------------FRILFPGKNSADQIYKIYGRWVA 169
+ GPEVD W++G ++ EM+ R P + ++K+
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR--LKNLHKVSPSLKG 248
Query: 170 LISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNN 210
+ L +P R TAAE L+HPF VPL+ N
Sbjct: 249 FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQN 289
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 25/221 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H N+V++ N +++++V +++E L + N E++ +C V Q L +
Sbjct: 79 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN--EEQIAAVCLAVLQALSVL 136
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTD-YVTTRWYRAPEVLLLSE 126
H QG HRD+K ++L++ G +K+ D G ++ +P V T ++ APE L+S
Sbjct: 137 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE--LISR 194
Query: 127 I-CGPEVDRWAMGAIMFEMLS----------------FRILFPGKNSADQIYKIYGRWVA 169
+ GPEVD W++G ++ EM+ R P + ++K+
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR--LKNLHKVSPSLKG 252
Query: 170 LISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNN 210
+ L +P R TAAE L+HPF VPL+ N
Sbjct: 253 FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQN 293
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 75/147 (51%), Gaps = 3/147 (2%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
K+ HP+I+KL +++ D+ +V +Y +L + E + +EDE R Q+ +
Sbjct: 64 KLLRHPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEK--KRMTEDEGRRFFQQIICAI 121
Query: 66 HYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLL 124
Y HR HRDLKP NLL+ + +KI D G+ + + Y APEV+
Sbjct: 122 EYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVING 181
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILF 151
GPEVD W+ G +++ ML R+ F
Sbjct: 182 KLYAGPEVDVWSCGIVLYVMLVGRLPF 208
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 25/221 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H N+V++ N +++++V +++E L + N E++ +C V Q L +
Sbjct: 129 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN--EEQIAAVCLAVLQALSVL 186
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTD-YVTTRWYRAPEVLLLSE 126
H QG HRD+K ++L++ G +K+ D G ++ +P V T ++ APE L+S
Sbjct: 187 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE--LISR 244
Query: 127 I-CGPEVDRWAMGAIMFEMLS----------------FRILFPGKNSADQIYKIYGRWVA 169
+ GPEVD W++G ++ EM+ R P + ++K+
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR--LKNLHKVSPSLKG 302
Query: 170 LISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNN 210
+ L +P R TAAE L+HPF VPL+ N
Sbjct: 303 FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQN 343
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 103/221 (46%), Gaps = 25/221 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H N+V++ N +++++V +++E L + N E++ +C V Q L +
Sbjct: 206 QHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMN--EEQIAAVCLAVLQALSVL 263
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTD-YVTTRWYRAPEVLLLSE 126
H QG HRD+K ++L++ G +K+ D G ++ +P V T ++ APE L+S
Sbjct: 264 HAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPE--LISR 321
Query: 127 IC-GPEVDRWAMGAIMFEMLS----------------FRILFPGKNSADQIYKIYGRWVA 169
+ GPEVD W++G ++ EM+ R P + ++K+
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPR--LKNLHKVSPSLKG 379
Query: 170 LISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNN 210
+ L +P R TAAE L+HPF VPL+ N
Sbjct: 380 FLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLMRQN 420
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 32/214 (14%)
Query: 5 RKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNF-SEDEARNLCFQVFQ 63
RK+ HPNIV+L + ++E ++VFD + +L ++ + F SE +A + Q+ +
Sbjct: 83 RKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGG--ELFEDIVAREFYSEADASHCIQQILE 139
Query: 64 GLHYMHRQGYFHRDLKPSNLLV---SKG-VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ Y H G HR+LKP NLL+ +KG +K+ D G+ E++ S + T Y +P
Sbjct: 140 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP 199
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA---------- 169
EVL P VD WA G I++ +L + +P DQ +++Y + A
Sbjct: 200 EVLKKDPYSKP-VDIWACGVILYILL---VGYPPFWDEDQ-HRLYAQIKAGAYDYPSPEW 254
Query: 170 ---------LISWLCSWNPRMRPTAAEALEHPFF 194
LI + + NP+ R TA +AL+ P+
Sbjct: 255 DTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 288
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 31/232 (13%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFD-YMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K+ +HPNI+KL + ++ + ++V + Y +L + F+E +A + QV G
Sbjct: 91 KLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSG 148
Query: 65 LHYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPE 120
+ Y+H+ HRDLKP NLL+ +IKI D G+ ++ + + T +Y APE
Sbjct: 149 VTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPE 208
Query: 121 VL--LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-YGRWV--------- 168
VL E C D W++G I+F +L+ F G+ + + K+ G++
Sbjct: 209 VLRKKYDEKC----DVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNV 264
Query: 169 -----ALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRS---VPLLCNNFE 212
LI + ++ + R +A +ALEHP+ + S +P L N E
Sbjct: 265 SEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIE 316
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 83.2 bits (204), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 80/160 (50%), Gaps = 20/160 (12%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFS---------EDEARN 56
K+ NHPNIVKL +++ + ++++ +Y S G+ F E EAR+
Sbjct: 66 KILNHPNIVKLFEVIETEKTLYLIMEYA----------SGGEVFDYLVAHGRMKEKEARS 115
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRW 115
Q+ + Y H++ HRDLK NLL+ + IKI D G E + +
Sbjct: 116 KFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPP 175
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKN 155
Y APE+ + GPEVD W++G I++ ++S + F G+N
Sbjct: 176 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 215
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 80/151 (52%), Gaps = 2/151 (1%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
K+ NHPNIVKL +++ + +++V +Y + + G+ E EAR Q+ +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAV 126
Query: 66 HYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLL 124
Y H++ HRDLK NLL+ + IKI D G E ++ + Y APE+
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQG 186
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKN 155
+ GPEVD W++G I++ ++S + F G+N
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 106/213 (49%), Gaps = 30/213 (14%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
++ HPNIV+L + + E +++FD + L A + +SE +A + Q+ + +
Sbjct: 76 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL-FEDIVAREYYSEADASHCIQQILEAV 134
Query: 66 HYMHRQGYFHRDLKPSNLLVS---KG-VIKIGDLGMVKEIDSSLPC-TDYVTTRWYRAPE 120
+ H+ G HRDLKP NLL++ KG +K+ D G+ E++ + T Y +PE
Sbjct: 135 LHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE 194
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA----------- 169
V L + G VD WA G I++ +L + +P DQ +++Y + A
Sbjct: 195 V-LRKDPYGKPVDLWACGVILYILL---VGYPPFWDEDQ-HRLYQQIKAGAYDFPSPEWD 249
Query: 170 --------LISWLCSWNPRMRPTAAEALEHPFF 194
LI+ + + NP R TAAEAL+HP+
Sbjct: 250 TVTPEAKDLINKMLTINPSKRITAAEALKHPWI 282
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
K+ NHPNIVKL +++ + +++V +Y + + G+ E EAR Q+ +
Sbjct: 69 KILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAV 127
Query: 66 HYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLL 124
Y H++ HRDLK NLL+ + IKI D G E + + Y APE+
Sbjct: 128 QYCHQKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQG 187
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKN 155
+ GPEVD W++G I++ ++S + F G+N
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 32/214 (14%)
Query: 5 RKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNF-SEDEARNLCFQVFQ 63
RK+ HPNIV+L + ++E ++VFD + +L ++ + F SE +A + Q+ +
Sbjct: 60 RKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGG--ELFEDIVAREFYSEADASHCIQQILE 116
Query: 64 GLHYMHRQGYFHRDLKPSNLLV---SKG-VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ Y H G HR+LKP NLL+ +KG +K+ D G+ E++ S + T Y +P
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP 176
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA---------- 169
EVL P VD WA G I++ +L + +P DQ +++Y + A
Sbjct: 177 EVLKKDPYSKP-VDIWACGVILYILL---VGYPPFWDEDQ-HRLYAQIKAGAYDYPSPEW 231
Query: 170 ---------LISWLCSWNPRMRPTAAEALEHPFF 194
LI + + NP+ R TA +AL+ P+
Sbjct: 232 DTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 32/214 (14%)
Query: 5 RKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNF-SEDEARNLCFQVFQ 63
RK+ HPNIV+L + ++E ++VFD + +L ++ + F SE +A + Q+ +
Sbjct: 60 RKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGG--ELFEDIVAREFYSEADASHCIQQILE 116
Query: 64 GLHYMHRQGYFHRDLKPSNLLV---SKG-VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ Y H G HR+LKP NLL+ +KG +K+ D G+ E++ S + T Y +P
Sbjct: 117 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP 176
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA---------- 169
EVL P VD WA G I++ +L + +P DQ +++Y + A
Sbjct: 177 EVLKKDPYSKP-VDIWACGVILYILL---VGYPPFWDEDQ-HRLYAQIKAGAYDYPSPEW 231
Query: 170 ---------LISWLCSWNPRMRPTAAEALEHPFF 194
LI + + NP+ R TA +AL+ P+
Sbjct: 232 DTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 265
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 107/214 (50%), Gaps = 32/214 (14%)
Query: 5 RKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNF-SEDEARNLCFQVFQ 63
RK+ HPNIV+L + ++E ++VFD + +L ++ + F SE +A + Q+ +
Sbjct: 59 RKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGG--ELFEDIVAREFYSEADASHCIQQILE 115
Query: 64 GLHYMHRQGYFHRDLKPSNLLV---SKG-VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ Y H G HR+LKP NLL+ +KG +K+ D G+ E++ S + T Y +P
Sbjct: 116 SIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSP 175
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA---------- 169
EVL P VD WA G I++ +L + +P DQ +++Y + A
Sbjct: 176 EVLKKDPYSKP-VDIWACGVILYILL---VGYPPFWDEDQ-HRLYAQIKAGAYDYPSPEW 230
Query: 170 ---------LISWLCSWNPRMRPTAAEALEHPFF 194
LI + + NP+ R TA +AL+ P+
Sbjct: 231 DTVTPEAKSLIDSMLTVNPKKRITADQALKVPWI 264
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
K+ NHPNIVKL +++ + ++++ +Y + + G+ E EAR+ Q+ +
Sbjct: 69 KILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR-MKEKEARSKFRQIVSAV 127
Query: 66 HYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLL 124
Y H++ HRDLK NLL+ + IKI D G E + Y APE+
Sbjct: 128 QYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQG 187
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKN 155
+ GPEVD W++G I++ ++S + F G+N
Sbjct: 188 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 218
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
K+ NHPNIVKL +++ + +++V +Y + + G+ E EAR Q+ +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAV 126
Query: 66 HYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLL 124
Y H++ HRDLK NLL+ + IKI D G E + + Y APE+
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQG 186
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKN 155
+ GPEVD W++G I++ ++S + F G+N
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
K+ NHPNIVKL +++ + +++V +Y + + G+ E EAR Q+ +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAV 126
Query: 66 HYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLL 124
Y H++ HRDLK NLL+ + IKI D G E + + Y APE+
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQG 186
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKN 155
+ GPEVD W++G I++ ++S + F G+N
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 30/213 (14%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
++ HPNIV+L + + E ++VFD + L A + +SE +A + Q+ + +
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL-FEDIVAREYYSEADASHCIQQILESV 116
Query: 66 HYMHRQGYFHRDLKPSNLLV---SKG-VIKIGDLGMVKEIDSSLPC-TDYVTTRWYRAPE 120
++ H G HRDLKP NLL+ SKG +K+ D G+ E+ + T Y +PE
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA----------- 169
V L + G VD WA G I++ +L + +P DQ +++Y + A
Sbjct: 177 V-LRKDPYGKPVDMWACGVILYILL---VGYPPFWDEDQ-HRLYQQIKAGAYDFPSPEWD 231
Query: 170 --------LISWLCSWNPRMRPTAAEALEHPFF 194
LI+ + + NP R TA+EAL+HP+
Sbjct: 232 TVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 2/151 (1%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
K+ NHPNIVKL +++ + +++V +Y + + G+ E EAR Q+ +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAV 126
Query: 66 HYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLL 124
Y H++ HRDLK NLL+ + IKI D G E + + Y APE+
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQG 186
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKN 155
+ GPEVD W++G I++ ++S + F G+N
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 105/213 (49%), Gaps = 30/213 (14%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
++ HPNIV+L + + E ++VFD + L A + +SE +A + Q+ + +
Sbjct: 58 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL-FEDIVAREYYSEADASHCIQQILESV 116
Query: 66 HYMHRQGYFHRDLKPSNLLV---SKG-VIKIGDLGMVKEIDSSLPC-TDYVTTRWYRAPE 120
++ H G HRDLKP NLL+ SKG +K+ D G+ E+ + T Y +PE
Sbjct: 117 NHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA----------- 169
V L + G VD WA G I++ +L + +P DQ +++Y + A
Sbjct: 177 V-LRKDPYGKPVDMWACGVILYILL---VGYPPFWDEDQ-HRLYQQIKAGAYDFPSPEWD 231
Query: 170 --------LISWLCSWNPRMRPTAAEALEHPFF 194
LI+ + + NP R TA+EAL+HP+
Sbjct: 232 TVTPEAKDLINKMLTINPAKRITASEALKHPWI 264
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
K+ HP+I+KL ++ D F+V +Y+ L G+ E EAR L Q+ +
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAV 124
Query: 66 HYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLL 124
Y HR HRDLKP N+L+ + KI D G+ + D + Y APEV+
Sbjct: 125 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISG 184
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG----------RWVA-LISW 173
GPEVD W+ G I++ +L + F ++ KI G R VA L+
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMH 244
Query: 174 LCSWNPRMRPTAAEALEHPFFR 195
+ +P R T + EH +F+
Sbjct: 245 MLQVDPLKRATIKDIREHEWFK 266
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
NHP + +L + + +F V +++ DL+ +++S + F E AR ++ L +
Sbjct: 82 NHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMF 139
Query: 68 MHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLLS 125
+H +G +RDLK N+L+ +G K+ D GM KE I + + + T Y APE+L
Sbjct: 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQ-E 198
Query: 126 EICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWL----------- 174
+ GP VD WAMG +++EML F +N D I V +WL
Sbjct: 199 MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSF 258
Query: 175 CSWNPRMRPTAAEA------LEHPFFRS 196
+ NP MR + L HPFF+
Sbjct: 259 MTKNPTMRLGSLTQGGEHAILRHPFFKE 286
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 81.6 bits (200), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 79/160 (49%), Gaps = 20/160 (12%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFS---------EDEARN 56
K+ NHPNIVKL +++ + +++V +Y S G+ F E EAR
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYA----------SGGEVFDYLVAHGWMKEKEARA 110
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRW 115
Q+ + Y H++ HRDLK NLL+ + IKI D G E + +
Sbjct: 111 KFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPP 170
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKN 155
Y APE+ + GPEVD W++G I++ ++S + F G+N
Sbjct: 171 YAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 210
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
K+ NHPNIVKL +++ + +++V +Y + + G+ E EAR Q+ +
Sbjct: 68 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVSAV 126
Query: 66 HYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLL 124
Y H++ HRDLK NLL+ + IKI D G E + Y APE+
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQG 186
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKN 155
+ GPEVD W++G I++ ++S + F G+N
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 106/213 (49%), Gaps = 30/213 (14%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
++ HPNIV+L + + E +++FD + L A + +SE +A + Q+ + +
Sbjct: 65 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGEL-FEDIVAREYYSEADASHCIQQILEAV 123
Query: 66 HYMHRQGYFHRDLKPSNLLVS---KG-VIKIGDLGMVKEIDSSLPC-TDYVTTRWYRAPE 120
+ H+ G HR+LKP NLL++ KG +K+ D G+ E++ + T Y +PE
Sbjct: 124 LHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPE 183
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA----------- 169
V L + G VD WA G I++ +L + +P DQ +++Y + A
Sbjct: 184 V-LRKDPYGKPVDLWACGVILYILL---VGYPPFWDEDQ-HRLYQQIKAGAYDFPSPEWD 238
Query: 170 --------LISWLCSWNPRMRPTAAEALEHPFF 194
LI+ + + NP R TAAEAL+HP+
Sbjct: 239 TVTPEAKDLINKMLTINPSKRITAAEALKHPWI 271
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 13/202 (6%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
K+ HP+I+KL ++ D+F+V +Y+ L G+ E E+R L Q+ G+
Sbjct: 71 KLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR-LDEKESRRLFQQILSGV 129
Query: 66 HYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLL 124
Y HR HRDLKP N+L+ + KI D G+ + + Y APEV+
Sbjct: 130 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISG 189
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPG-------KNSADQIY----KIYGRWVALISW 173
GPEVD W+ G I++ +L + F K D I+ + ++L+
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKH 249
Query: 174 LCSWNPRMRPTAAEALEHPFFR 195
+ +P R T + EH +F+
Sbjct: 250 MLQVDPMKRATIKDIREHEWFK 271
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 99/210 (47%), Gaps = 23/210 (10%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLK--LMKESAGQNFSEDEARNLCFQVFQGL 65
+HPNI+K+ + +++ +++IV + E +LL+ + ++ G+ SE L Q+ L
Sbjct: 78 DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNAL 137
Query: 66 HYMHRQGYFHRDLKPSNLLVSK----GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
Y H Q H+DLKP N+L IKI D G+ + S T+ T Y APEV
Sbjct: 138 AYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEV 197
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSFRILFPGK--------------NSADQIYKIYGRW 167
+ D W+ G +M+ +L+ + F G N A + + +
Sbjct: 198 --FKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQA 255
Query: 168 VALISWLCSWNPRMRPTAAEALEHPFFRSC 197
V L+ + + +P RP+AA+ L H +F+
Sbjct: 256 VDLLKQMLTKDPERRPSAAQVLHHEWFKQA 285
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 80.5 bits (197), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 78/153 (50%), Gaps = 2/153 (1%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQ 63
+ K+ NHPNIVKL +++ + +++V +Y + + G+ E EAR Q+
Sbjct: 66 IXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRX-KEKEARAKFRQIVS 124
Query: 64 GLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVL 122
+ Y H++ HRDLK NLL+ IKI D G E + Y APE+
Sbjct: 125 AVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELF 184
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKN 155
+ GPEVD W++G I++ ++S + F G+N
Sbjct: 185 QGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN 217
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 108/230 (46%), Gaps = 30/230 (13%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFD-YMESDLLKLMKESAGQNFSEDEARNLCFQVF 62
L K +HPNI KL ++ ++V + Y +L + + + FSE +A + QV
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEI--ISRKRFSEVDAARIIRQVL 136
Query: 63 QGLHYMHRQGYFHRDLKPSNLLV---SKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRA 118
G+ Y H+ HRDLKP NLL+ SK I+I D G+ ++S D + T +Y A
Sbjct: 137 SGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIA 196
Query: 119 PEVL--LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-YGRWV------- 168
PEVL E C D W+ G I++ +LS F G N D + K+ G++
Sbjct: 197 PEVLHGTYDEKC----DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWK 252
Query: 169 -------ALISWLCSWNPRMRPTAAEALEHPFFRSC--HFVPRSVPLLCN 209
LI ++ P R +A +AL+H + ++ + VP L N
Sbjct: 253 KVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKEQISVDVPSLDN 302
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 77/163 (47%), Gaps = 24/163 (14%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV---IKIGDLGMVKEI-----DSSLPC 107
N+ Q+F LHY+H QG HRD+KP N L S IK+ D G+ KE
Sbjct: 172 NIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGM 231
Query: 108 TDYVTTRWYRAPEVL-LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR 166
T T ++ APEVL +E GP+ D W+ G ++ +L + FPG N AD I ++ +
Sbjct: 232 TTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNK 291
Query: 167 WVA---------------LISWLCSWNPRMRPTAAEALEHPFF 194
+ L+S L + N R A AL+HP+
Sbjct: 292 KLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWI 334
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 99/215 (46%), Gaps = 25/215 (11%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQ 63
L+K+N HP I+K++N + ED +IV + ME L K + E + +Q+
Sbjct: 194 LKKLN-HPCIIKIKNFF-DAEDYYIVLELMEGGEL-FDKVVGNKRLKEATCKLYFYQMLL 250
Query: 64 GLHYMHRQGYFHRDLKPSNLLVSKG----VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ Y+H G HRDLKP N+L+S +IKI D G K + + T Y AP
Sbjct: 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAP 310
Query: 120 EVLLLSEICG--PEVDRWAMGAIMFEMLSFRILFPGKNS----ADQIY------------ 161
EVL+ G VD W++G I+F LS F + DQI
Sbjct: 311 EVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA 370
Query: 162 KIYGRWVALISWLCSWNPRMRPTAAEALEHPFFRS 196
++ + + L+ L +P+ R T EAL HP+ +
Sbjct: 371 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQD 405
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 24/209 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPNI+ L ++ + DV ++ + + +L + E ++ +EDEA Q+ G+HY+
Sbjct: 67 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYL 124
Query: 69 HRQGYFHRDLKPSNL-LVSKGV----IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H + H DLKP N+ L+ K V IK+ D G+ +I++ + T + APE++
Sbjct: 125 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN 184
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G+ + + Y + +
Sbjct: 185 Y-EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK 243
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFRSC 197
I L +P+ R T A++LEH + ++
Sbjct: 244 DFIRRLLVKDPKRRMTIAQSLEHSWIKAI 272
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 105/212 (49%), Gaps = 30/212 (14%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
++ HPNIV+L + + E ++VFD + L A + +SE +A + Q+ + +
Sbjct: 85 RLLKHPNIVRLHDSISEEGFHYLVFDLVTGGEL-FEDIVAREYYSEADASHCIHQILESV 143
Query: 66 HYMHRQGYFHRDLKPSNLLVS---KG-VIKIGDLGMVKEIDSSLPC-TDYVTTRWYRAPE 120
+++H+ HRDLKP NLL++ KG +K+ D G+ E+ + T Y +PE
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPE 203
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA----------- 169
V L + G VD WA G I++ +L + +P DQ +K+Y + A
Sbjct: 204 V-LRKDPYGKPVDIWACGVILYILL---VGYPPFWDEDQ-HKLYQQIKAGAYDFPSPEWD 258
Query: 170 --------LISWLCSWNPRMRPTAAEALEHPF 193
LI+ + + NP R TA +AL+HP+
Sbjct: 259 TVTPEAKNLINQMLTINPAKRITADQALKHPW 290
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 18/199 (9%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
HP+I++L N ++ V++V + + + ++ + FSE+EAR+ Q+ G+ Y+H
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 70 RQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVT---TRWYRAPEVLLLS 125
G HRDL SNLL+++ + IKI D G+ ++ +P + T T Y +PE+ S
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQL--KMPHEKHYTLCGTPNYISPEIATRS 187
Query: 126 EICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY-----------GRWVALISWL 174
G E D W++G + + +L R F + + K+ LI L
Sbjct: 188 A-HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMPSFLSIEAKDLIHQL 246
Query: 175 CSWNPRMRPTAAEALEHPF 193
NP R + + L+HPF
Sbjct: 247 LRRNPADRLSLSSVLDHPF 265
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDY-MESDLLKLMKESAGQNFSEDEARNLCFQ 60
I + K ++P++V ++ + V++V + LL+L K + +E EAR Q
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQ 150
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEID-SSLPCTDYVTTRWYRA 118
QG+ Y+H HRDLK NL ++ + +KIGD G+ +I+ D T Y A
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIA 210
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFP-----------GKNSADQIYKIYGRW 167
PEV L + EVD W++G I++ +L + F KN I
Sbjct: 211 PEV-LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA 269
Query: 168 VALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLC 208
ALI + +P +RP+ AE L FF S + P +P C
Sbjct: 270 SALIRRMLHADPTLRPSVAELLTDEFFTSG-YAPMRLPTSC 309
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 103/212 (48%), Gaps = 30/212 (14%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
++ H NIV+L + + E ++VFD + L A + +SE +A + Q+ + +
Sbjct: 58 RLLKHSNIVRLHDSISEEGFHYLVFDLVTGGEL-FEDIVAREYYSEADASHCIQQILEAV 116
Query: 66 HYMHRQGYFHRDLKPSNLLVS---KG-VIKIGDLGMVKEIDSSLPC-TDYVTTRWYRAPE 120
+ H+ G HRDLKP NLL++ KG +K+ D G+ E+ + T Y +PE
Sbjct: 117 LHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPE 176
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA----------- 169
V L E G VD WA G I++ +L + +P DQ +K+Y + A
Sbjct: 177 V-LRKEAYGKPVDIWACGVILYILL---VGYPPFWDEDQ-HKLYQQIKAGAYDFPSPEWD 231
Query: 170 --------LISWLCSWNPRMRPTAAEALEHPF 193
LI+ + + NP R TA EAL+HP+
Sbjct: 232 TVTPEAKNLINQMLTINPAKRITAHEALKHPW 263
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
K+ HP+I+KL ++ D F+V +Y+ L G+ E EAR L Q+ +
Sbjct: 66 KLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGR-VEEMEARRLFQQILSAV 124
Query: 66 HYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLL 124
Y HR HRDLKP N+L+ + KI D G+ + + Y APEV+
Sbjct: 125 DYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISG 184
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG----------RWVA-LISW 173
GPEVD W+ G I++ +L + F ++ KI G R VA L+
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMH 244
Query: 174 LCSWNPRMRPTAAEALEHPFFR 195
+ +P R T + EH +F+
Sbjct: 245 MLQVDPLKRATIKDIREHEWFK 266
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 32/223 (14%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
+ +NHP +V L + + +F V +Y+ DL+ M+ + E+ AR ++
Sbjct: 106 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEIS 163
Query: 63 QGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPE 120
L+Y+H +G +RDLK N+L+ S+G IK+ D GM KE + + + T Y APE
Sbjct: 164 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPE 223
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSFRILF--------PGKNSADQIYKIY-------- 164
+ L E G VD WA+G +MFEM++ R F P +N+ D ++++
Sbjct: 224 I-LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP 282
Query: 165 ----GRWVALISWLCSWNPRMR----PTA--AEALEHPFFRSC 197
+ +++ + +P+ R P A+ HPFFR+
Sbjct: 283 RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 75/147 (51%), Gaps = 26/147 (17%)
Query: 24 EDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNL 83
++++IV + +SDL KL K +E+ + + + + G +++H G HRDLKP+N
Sbjct: 103 DELYIVLEIADSDLKKLFKTPIF--LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANC 160
Query: 84 LVSKG-VIKIGDLGMVKEIDSSLPC-----------------------TDYVTTRWYRAP 119
L+++ +K+ D G+ + I+S T +V TRWYRAP
Sbjct: 161 LLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAP 220
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLS 146
E++LL E +D W+ G I E+L+
Sbjct: 221 ELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDY-MESDLLKLMKESAGQNFSEDEARNLCFQ 60
I + K ++P++V ++ + V++V + LL+L K + +E EAR Q
Sbjct: 77 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQ 134
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEID-SSLPCTDYVTTRWYRA 118
QG+ Y+H HRDLK NL ++ + +KIGD G+ +I+ D T Y A
Sbjct: 135 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIA 194
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFP-----------GKNSADQIYKIYGRW 167
PEV L + EVD W++G I++ +L + F KN I
Sbjct: 195 PEV-LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA 253
Query: 168 VALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLC 208
ALI + +P +RP+ AE L FF S + P +P C
Sbjct: 254 SALIRRMLHADPTLRPSVAELLTDEFFTSG-YAPMRLPTSC 293
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 30/217 (13%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HPNI+KL+ + + ++ +V + + +L + E +SE +A + Q+ + + Y
Sbjct: 106 SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAY 163
Query: 68 MHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
+H G HRDLKP NLL + +KI D G+ K ++ + T Y APE+L
Sbjct: 164 LHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILR 223
Query: 124 LSEICGPEVDRWAMGAIMFEML-SFRILFPGKNSADQI---------YKIYGRW------ 167
GPEVD W++G I + +L F + DQ Y W
Sbjct: 224 GCAY-GPEVDMWSVGIITYILLCGFEPFY--DERGDQFMFRRILNCEYYFISPWWDEVSL 280
Query: 168 --VALISWLCSWNPRMRPTAAEALEHPFF--RSCHFV 200
L+ L +P+ R T +AL+HP+ ++ +FV
Sbjct: 281 NAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANFV 317
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 97/207 (46%), Gaps = 22/207 (10%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I L K +HPNI+KL ++ ++ + ++V ++ E L + F E +A N+ Q+
Sbjct: 97 ISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGEL-FEQIINRHKFDECDAANIMKQI 155
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG----VIKIGDLGMVKEIDSSLPCTDYVTTRWYR 117
G+ Y+H+ HRD+KP N+L+ IKI D G+ D + T +Y
Sbjct: 156 LSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYI 215
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI--------YGRW-- 167
APEV L + + D W+ G IM+ +L F G+N D I K+ + W
Sbjct: 216 APEV--LKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKN 273
Query: 168 -----VALISWLCSWNPRMRPTAAEAL 189
LI + +++ R TA EAL
Sbjct: 274 ISDEAKELIKLMLTYDYNKRCTAEEAL 300
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFD-YMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K +HPNI+KL ++ + ++V + Y +L + Q FSE +A + QV G
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI--ILRQKFSEVDAAVIMKQVLSG 133
Query: 65 LHYMHRQGYFHRDLKPSNLLVSK----GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPE 120
Y+H+ HRDLKP NLL+ +IKI D G+ + + + T +Y APE
Sbjct: 134 TTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPE 193
Query: 121 VLL--LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-YGR-------WV-- 168
VL E C D W+ G I++ +L F G+ + + ++ G+ W
Sbjct: 194 VLRKKYDEKC----DVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 249
Query: 169 -----ALISWLCSWNPRMRPTAAEALEHPFF 194
L+ + ++ P R +A EAL HP+
Sbjct: 250 SDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 32/223 (14%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
+ +NHP +V L + + +F V +Y+ DL+ M+ + E+ AR ++
Sbjct: 74 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEIS 131
Query: 63 QGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPE 120
L+Y+H +G +RDLK N+L+ S+G IK+ D GM KE + + + T Y APE
Sbjct: 132 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 191
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSFRILF--------PGKNSADQIYKIY-------- 164
+ L E G VD WA+G +MFEM++ R F P +N+ D ++++
Sbjct: 192 I-LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP 250
Query: 165 ----GRWVALISWLCSWNPRMR----PTA--AEALEHPFFRSC 197
+ +++ + +P+ R P A+ HPFFR+
Sbjct: 251 RSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNV 293
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 32/223 (14%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
+ +NHP +V L + + +F V +Y+ DL+ M+ + E+ AR ++
Sbjct: 63 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEIS 120
Query: 63 QGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPE 120
L+Y+H +G +RDLK N+L+ S+G IK+ D GM KE + + + T Y APE
Sbjct: 121 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 180
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSFRILF--------PGKNSADQIYKIY-------- 164
+ L E G VD WA+G +MFEM++ R F P +N+ D ++++
Sbjct: 181 I-LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP 239
Query: 165 ----GRWVALISWLCSWNPRMR----PTA--AEALEHPFFRSC 197
+ +++ + +P+ R P A+ HPFFR+
Sbjct: 240 RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 109/223 (48%), Gaps = 32/223 (14%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
+ +NHP +V L + + +F V +Y+ DL+ M+ + E+ AR ++
Sbjct: 59 FEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEIS 116
Query: 63 QGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPE 120
L+Y+H +G +RDLK N+L+ S+G IK+ D GM KE + + + T Y APE
Sbjct: 117 LALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 176
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSFRILF--------PGKNSADQIYKIY-------- 164
+ L E G VD WA+G +MFEM++ R F P +N+ D ++++
Sbjct: 177 I-LRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP 235
Query: 165 ----GRWVALISWLCSWNPRMR----PTA--AEALEHPFFRSC 197
+ +++ + +P+ R P A+ HPFFR+
Sbjct: 236 RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 278
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+H N+V + + +++++V +++E L + N E++ +C V + L Y+
Sbjct: 100 HHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMN--EEQIATVCLSVLRALSYL 157
Query: 69 HRQGYFHRDLKP-SNLLVSKGVIKIGDLGMVKEIDSSLPCTD-YVTTRWYRAPEVLLLSE 126
H QG HRD+K S LL S G IK+ D G ++ +P V T ++ APEV +S
Sbjct: 158 HNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEV--ISR 215
Query: 127 I-CGPEVDRWAMGAIMFEMLSF--------------RILFPGKNSADQIYKIYGRWVALI 171
+ G EVD W++G ++ EM+ RI ++K+ +
Sbjct: 216 LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRVKDLHKVSSVLRGFL 275
Query: 172 SWLCSWNPRMRPTAAEALEHPFFR 195
+ P R TA E L HPF +
Sbjct: 276 DLMLVREPSQRATAQELLGHPFLK 299
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 91/168 (54%), Gaps = 13/168 (7%)
Query: 9 NHPNIVKLRNLV-----KEHEDVF--IVFDYMESDLLKLMKESAGQNFSEDEA--RNLCF 59
+HPNIV+L++ ++ D++ +V +Y+ L + + + + + F
Sbjct: 77 HHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLF 136
Query: 60 QVFQGLHYMH--RQGYFHRDLKPSNLLVSK--GVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
Q+ + + +H HRD+KP N+LV++ G +K+ D G K++ S P Y+ +R+
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY 196
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
YRAPE++ ++ VD W++G I EM+ +F G NSA Q+++I
Sbjct: 197 YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEI 244
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 24/209 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPNI+ L ++ + DV ++ + + +L + E ++ +EDEA Q+ G+HY+
Sbjct: 88 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYL 145
Query: 69 HRQGYFHRDLKPSNL-LVSKGV----IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H + H DLKP N+ L+ K V IK+ D G+ +I++ + T + APE++
Sbjct: 146 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN 205
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G+ + + Y + +
Sbjct: 206 Y-EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK 264
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFRSC 197
I L +P+ R A++LEH + ++
Sbjct: 265 DFIRRLLVKDPKRRMXIAQSLEHSWIKAI 293
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 108/224 (48%), Gaps = 42/224 (18%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLL--KLMKESAGQNFSEDEARNLCFQ 60
L + HPNI+ L+++ + + V++V + M+ L K++++ + FSE EA + F
Sbjct: 68 ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQ---KFFSEREASAVLFT 124
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLV-----SKGVIKIGDLGMVKEIDSS-----LPCTDY 110
+ + + Y+H QG HRDLKPSN+L + I+I D G K++ + PC
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC--- 181
Query: 111 VTTRWYRAPEVLLLSEICGPEV--DRWAMGAIMFEMLSFRILF---PGKNSADQIYKI-- 163
T + APEVL E G + D W++G +++ ML+ F P + + +I
Sbjct: 182 -YTANFVAPEVL---ERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS 237
Query: 164 ------YGRWVA-------LISWLCSWNPRMRPTAAEALEHPFF 194
G W + L+S + +P R TAA L HP+
Sbjct: 238 GKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 100/208 (48%), Gaps = 24/208 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPNI+ L ++ + DV ++ + + +L + E ++ +EDEA Q+ G+HY+
Sbjct: 74 HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYL 131
Query: 69 HRQGYFHRDLKPSNL-LVSKGV----IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H + H DLKP N+ L+ K V IK+ D G+ +I++ + T + APE++
Sbjct: 132 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVN 191
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G+ + + Y + +
Sbjct: 192 Y-EPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAK 250
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFRS 196
I L +P+ R A++LEH + ++
Sbjct: 251 DFIRRLLVKDPKRRMXIAQSLEHSWIKA 278
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 28/211 (13%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFD-YMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K +HPNI+KL ++ + ++V + Y +L + Q FSE +A + QV G
Sbjct: 59 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEI--ILRQKFSEVDAAVIMKQVLSG 116
Query: 65 LHYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPE 120
Y+H+ HRDLKP NLL+ +IKI D G+ + + + T +Y APE
Sbjct: 117 TTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPE 176
Query: 121 VLL--LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-YGR-------WV-- 168
VL E C D W+ G I++ +L F G+ + + ++ G+ W
Sbjct: 177 VLRKKYDEKC----DVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQV 232
Query: 169 -----ALISWLCSWNPRMRPTAAEALEHPFF 194
L+ + ++ P R +A EAL HP+
Sbjct: 233 SDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 81/166 (48%), Gaps = 34/166 (20%)
Query: 13 IVKLRNLV-----KEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
I++L +L+ + ++++IV + +SDL KL K +E + + + + G +
Sbjct: 89 IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF--LTEQHVKTILYNLLLGEKF 146
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPC------------------- 107
+H G HRDLKP+N L+++ +KI D G+ + I+S
Sbjct: 147 IHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 108 -------TDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS 146
T +V TRWYRAPE++LL E +D W+ G I E+L+
Sbjct: 207 KNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 44/234 (18%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLL--KLMKESAGQNFSEDEARNLCFQ 60
L + HPNI+ L+++ + + V++V + M L K++++ + FSE EA +
Sbjct: 73 ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ---KFFSEREASFVLHT 129
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLV-----SKGVIKIGDLGMVKEIDSS-----LPCTDY 110
+ + + Y+H QG HRDLKPSN+L + ++I D G K++ + PC
Sbjct: 130 IGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC--- 186
Query: 111 VTTRWYRAPEVLL---LSEICGPEVDRWAMGAIMFEMLSFRILF---PGKNSADQIYKI- 163
T + APEVL E C D W++G +++ ML+ F P + + +I
Sbjct: 187 -YTANFVAPEVLKRQGYDEGC----DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIG 241
Query: 164 -------YGRWVA-------LISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRS 203
G W L+S + +P R TA + L+HP+ +P+S
Sbjct: 242 SGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQS 295
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 100/208 (48%), Gaps = 23/208 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLL-KLMKESAGQNFSEDEARNLCFQVFQGLH 66
NHP +VKL + ++++ D++ DL +L KE F+E++ + ++ GL
Sbjct: 88 NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM---FTEEDVKFYLAELALGLD 144
Query: 67 YMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLL 124
++H G +RDLKP N+L+ +G IK+ D G+ KE ID + T Y APEV +
Sbjct: 145 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEV-VN 203
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISW 173
+ D W+ G +MFEML+ + F GK+ + + I + +L+
Sbjct: 204 RQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRA 263
Query: 174 LCSWNPRMR----PTAAEALEHPFFRSC 197
L NP R P AE ++ F S
Sbjct: 264 LFKRNPANRLGSGPDGAEEIKRHVFYST 291
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 11 PNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
P ++ L + + ++ ++ +Y ++ L + SE++ L Q+ +G++Y+H
Sbjct: 89 PRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH 148
Query: 70 RQGYFHRDLKPSNLLVSK----GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLS 125
+ H DLKP N+L+S G IKI D GM ++I + + + T Y APE+L
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYD 208
Query: 126 EICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV---------------AL 170
I D W +G I + +L+ F G+++ + I V
Sbjct: 209 PITTA-TDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDF 267
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRSCHF 199
I L NP RPTA L H + + F
Sbjct: 268 IQSLLVKNPEKRPTAEICLSHSWLQQWDF 296
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 99/224 (44%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 120
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS TD T Y PE ++
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-TDLCGTLDYLPPE-MI 178
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 237
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ A
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITAN----SSKPSNCQNKESAA 277
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 44/234 (18%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLL--KLMKESAGQNFSEDEARNLCFQ 60
L + HPNI+ L+++ + + V++V + M L K++++ + FSE EA +
Sbjct: 73 ILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQ---KFFSEREASFVLHT 129
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLV-----SKGVIKIGDLGMVKEIDSS-----LPCTDY 110
+ + + Y+H QG HRDLKPSN+L + ++I D G K++ + PC
Sbjct: 130 IGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC--- 186
Query: 111 VTTRWYRAPEVLL---LSEICGPEVDRWAMGAIMFEMLSFRILF---PGKNSADQIYKI- 163
T + APEVL E C D W++G +++ ML+ F P + + +I
Sbjct: 187 -YTANFVAPEVLKRQGYDEGC----DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIG 241
Query: 164 -------YGRWVA-------LISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRS 203
G W L+S + +P R TA + L+HP+ +P+S
Sbjct: 242 SGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQS 295
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 20/205 (9%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HP IV L + ++++ +Y+ L + E G F ED A ++ L ++
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI-FMEDTACFYLAEISMALGHL 137
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLLSE 126
H++G +RDLKP N++++ +G +K+ D G+ KE I + T Y APE+L+ S
Sbjct: 138 HQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSG 197
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG-----------RWVALISWLC 175
VD W++GA+M++ML+ F G+N I KI L+ L
Sbjct: 198 -HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLL 256
Query: 176 SWNPRMR-----PTAAEALEHPFFR 195
N R A E HPFFR
Sbjct: 257 KRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 102/211 (48%), Gaps = 23/211 (10%)
Query: 7 MNNHPNIVKLRNLVKEHEDVFIVFDYME-SDL-LKLMKES-AGQNFSEDEARNLCFQVFQ 63
M HP+IV+L +++VF++M+ +DL +++K + AG +SE A + Q+ +
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 64 GLHYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEI-DSSLPCTDYVTTRWYRA 118
L Y H HRD+KP N+L++ +K+GD G+ ++ +S L V T + A
Sbjct: 142 ALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLS------------FRILFPGKNSAD--QIYKIY 164
PEV + E G VD W G I+F +LS F + GK + Q I
Sbjct: 202 PEV-VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHIS 260
Query: 165 GRWVALISWLCSWNPRMRPTAAEALEHPFFR 195
L+ + +P R T EAL HP+ +
Sbjct: 261 ESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 20/205 (9%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HP IV L + ++++ +Y+ L + E G F ED A ++ L ++
Sbjct: 79 KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI-FMEDTACFYLAEISMALGHL 137
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLLSE 126
H++G +RDLKP N++++ +G +K+ D G+ KE I + T Y APE+L+ S
Sbjct: 138 HQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSG 197
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG-----------RWVALISWLC 175
VD W++GA+M++ML+ F G+N I KI L+ L
Sbjct: 198 -HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEARDLLKKLL 256
Query: 176 SWNPRMR-----PTAAEALEHPFFR 195
N R A E HPFFR
Sbjct: 257 KRNAASRLGAGPGDAGEVQAHPFFR 281
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 102/222 (45%), Gaps = 20/222 (9%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDY-MESDLLKLMKESAGQNFSEDEARNLCFQ 60
I + K ++P++V ++ + V++V + LL+L K + +E EAR Q
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQ 150
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI--DSSLPCTDYVTTRWYR 117
QG+ Y+H HRDLK NL ++ + +KIGD G+ +I D T T Y
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYI 209
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFP-----------GKNSADQIYKIYGR 166
APEV L + EVD W++G I++ +L + F KN I
Sbjct: 210 APEV-LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPV 268
Query: 167 WVALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLC 208
ALI + +P +RP+ AE L FF S + P +P C
Sbjct: 269 ASALIRRMLHADPTLRPSVAELLTDEFFTSG-YAPMRLPTSC 309
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPNI+ L ++ + DV ++ + + +L + + ++ SE+EA + Q+ G++Y+
Sbjct: 74 HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYL 131
Query: 69 HRQGYFHRDLKPSNL-LVSKGV----IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H + H DLKP N+ L+ K + IK+ D G+ EI+ + + T + APE++
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-----------YGRWVAL-- 170
E G E D W++G I + +LS F G + + I + + L
Sbjct: 192 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 171 --ISWLCSWNPRMRPTAAEALEHPFF 194
I L R R T EAL HP+
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWI 276
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDY-MESDLLKLMKESAGQNFSEDEARNLCFQ 60
I + K ++P++V ++ + V++V + LL+L K + +E EAR Q
Sbjct: 93 IAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRR--KAVTEPEARYFMRQ 150
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYV-TTRWYRA 118
QG+ Y+H HRDLK NL ++ + +KIGD G+ +I+ + T Y A
Sbjct: 151 TIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIA 210
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFP-----------GKNSADQIYKIYGRW 167
PEV L + EVD W++G I++ +L + F KN I
Sbjct: 211 PEV-LCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPVA 269
Query: 168 VALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLC 208
ALI + +P +RP+ AE L FF S + P +P C
Sbjct: 270 SALIRRMLHADPTLRPSVAELLTDEFFTSG-YAPMRLPTSC 309
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-MESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H ++V ++++ VF+V + LL+L K + +E EAR Q+ G Y+
Sbjct: 74 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYL 131
Query: 69 HRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYV-TTRWYRAPEVLLLSE 126
HR HRDLK NL +++ + +KIGD G+ +++ + T Y APEV L +
Sbjct: 132 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV-LSKK 190
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFP-----------GKNSADQIYKIYGRWVALISWLC 175
EVD W++G IM+ +L + F KN I +LI +
Sbjct: 191 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKML 250
Query: 176 SWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLC 208
+P RPT E L FF S ++P +P+ C
Sbjct: 251 QTDPTARPTINELLNDEFFTSG-YIPARLPITC 282
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-MESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H ++V ++++ VF+V + LL+L K + +E EAR Q+ G Y+
Sbjct: 100 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYL 157
Query: 69 HRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYV-TTRWYRAPEVLLLSE 126
HR HRDLK NL +++ + +KIGD G+ +++ + T Y APEV L +
Sbjct: 158 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV-LSKK 216
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFP-----------GKNSADQIYKIYGRWVALISWLC 175
EVD W++G IM+ +L + F KN I +LI +
Sbjct: 217 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKML 276
Query: 176 SWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLC 208
+P RPT E L FF S ++P +P+ C
Sbjct: 277 QTDPTARPTINELLNDEFFTSG-YIPARLPITC 308
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-MESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H ++V ++++ VF+V + LL+L K + +E EAR Q+ G Y+
Sbjct: 98 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYL 155
Query: 69 HRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYV-TTRWYRAPEVLLLSE 126
HR HRDLK NL +++ + +KIGD G+ +++ + T Y APEV L +
Sbjct: 156 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEV-LSKK 214
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFP-----------GKNSADQIYKIYGRWVALISWLC 175
EVD W++G IM+ +L + F KN I +LI +
Sbjct: 215 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKML 274
Query: 176 SWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLC 208
+P RPT E L FF S ++P +P+ C
Sbjct: 275 QTDPTARPTINELLNDEFFTSG-YIPARLPITC 306
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-MESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H ++V ++++ VF+V + LL+L K + +E EAR Q+ G Y+
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYL 133
Query: 69 HRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYV-TTRWYRAPEVLLLSE 126
HR HRDLK NL +++ + +KIGD G+ +++ + T Y APEV L +
Sbjct: 134 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEV-LSKK 192
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFP-----------GKNSADQIYKIYGRWVALISWLC 175
EVD W++G IM+ +L + F KN I +LI +
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKML 252
Query: 176 SWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLC 208
+P RPT E L FF S ++P +P+ C
Sbjct: 253 QTDPTARPTINELLNDEFFTSG-YIPARLPITC 284
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-MESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H ++V ++++ VF+V + LL+L K + +E EAR Q+ G Y+
Sbjct: 80 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYL 137
Query: 69 HRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYV-TTRWYRAPEVLLLSE 126
HR HRDLK NL +++ + +KIGD G+ +++ + T Y APEV L +
Sbjct: 138 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEV-LSKK 196
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFP-----------GKNSADQIYKIYGRWVALISWLC 175
EVD W++G IM+ +L + F KN I +LI +
Sbjct: 197 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKML 256
Query: 176 SWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLC 208
+P RPT E L FF S ++P +P+ C
Sbjct: 257 QTDPTARPTINELLNDEFFTSG-YIPARLPITC 288
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 99/213 (46%), Gaps = 18/213 (8%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-MESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H ++V ++++ VF+V + LL+L K + +E EAR Q+ G Y+
Sbjct: 76 HQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYL 133
Query: 69 HRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYV-TTRWYRAPEVLLLSE 126
HR HRDLK NL +++ + +KIGD G+ +++ + T Y APEV L +
Sbjct: 134 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEV-LSKK 192
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFP-----------GKNSADQIYKIYGRWVALISWLC 175
EVD W++G IM+ +L + F KN I +LI +
Sbjct: 193 GHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPKHINPVAASLIQKML 252
Query: 176 SWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLC 208
+P RPT E L FF S ++P +P+ C
Sbjct: 253 QTDPTARPTINELLNDEFFTSG-YIPARLPITC 284
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 99/224 (44%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 121
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS TD T Y PE ++
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-TDLCGTLDYLPPE-MI 179
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 238
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWITAN----SSKPSNCQNKESAS 278
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 82/147 (55%), Gaps = 8/147 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKE-HED-VFIVFDYMESDLLKLMKESAGQNFSEDEARNLCF 59
I + K +HPN+VKL ++ + +ED +++VF+ + +M+ + SED+AR
Sbjct: 87 IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQG--PVMEVPTLKPLSEDQARFYFQ 144
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLP-CTDYVTTRWYR 117
+ +G+ Y+H Q HRD+KPSNLLV + G IKI D G+ E S ++ V T +
Sbjct: 145 DLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFM 204
Query: 118 APEVLLLSE--ICGPEVDRWAMGAIMF 142
APE L + G +D WAMG ++
Sbjct: 205 APESLSETRKIFSGKALDVWAMGVTLY 231
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 99/224 (44%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 125
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS TD T Y PE ++
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-TDLCGTLDYLPPE-MI 183
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITAN----SSKPSNCQNKESAS 282
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN++ L + + DV ++ + + +L + E ++ +E+EA Q+ G++Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYL 130
Query: 69 HRQGYFHRDLKPSNLL-----VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H H DLKP N++ V K IKI D G+ +ID + T + APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G + + Y+ + +
Sbjct: 191 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFR 195
I L +P+ R T ++L+HP+ +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN++ L + + DV ++ + + +L + E ++ +E+EA Q+ G++Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYL 130
Query: 69 HRQGYFHRDLKPSNLL-----VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H H DLKP N++ V K IKI D G+ +ID + T + APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G + + Y+ + +
Sbjct: 191 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFR 195
I L +P+ R T ++L+HP+ +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN++ L + + DV ++ + + +L + E ++ +E+EA Q+ G++Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYL 130
Query: 69 HRQGYFHRDLKPSNLL-----VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H H DLKP N++ V K IKI D G+ +ID + T + APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G + + Y+ + +
Sbjct: 191 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFR 195
I L +P+ R T ++L+HP+ +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN++ L + + DV ++ + + +L + E ++ +E+EA Q+ G++Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYL 130
Query: 69 HRQGYFHRDLKPSNLL-----VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H H DLKP N++ V K IKI D G+ +ID + T + APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G + + Y+ + +
Sbjct: 191 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFR 195
I L +P+ R T ++L+HP+ +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN++ L + + DV ++ + + +L + E ++ +E+EA Q+ G++Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYL 130
Query: 69 HRQGYFHRDLKPSNLL-----VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H H DLKP N++ V K IKI D G+ +ID + T + APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVN 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G + + Y+ + +
Sbjct: 191 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFR 195
I L +P+ R T ++L+HP+ +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN++ L + + DV ++ + + +L + E ++ +E+EA Q+ G++Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYL 130
Query: 69 HRQGYFHRDLKPSNLL-----VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H H DLKP N++ V K IKI D G+ +ID + T + APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G + + Y+ + +
Sbjct: 191 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFR 195
I L +P+ R T ++L+HP+ +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN++ L + + DV ++ + + +L + E ++ +E+EA Q+ G++Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYL 130
Query: 69 HRQGYFHRDLKPSNLL-----VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H H DLKP N++ V K IKI D G+ +ID + T + APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G + + Y+ + +
Sbjct: 191 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFR 195
I L +P+ R T ++L+HP+ +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN++ L + + DV ++ + + +L + E ++ +E+EA Q+ G++Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYL 130
Query: 69 HRQGYFHRDLKPSNLL-----VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H H DLKP N++ V K IKI D G+ +ID + T + APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G + + Y+ + +
Sbjct: 191 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFR 195
I L +P+ R T ++L+HP+ +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN++ L + + DV ++ + + +L + E ++ +E+EA Q+ G++Y+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYL 129
Query: 69 HRQGYFHRDLKPSNLL-----VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H H DLKP N++ V K IKI D G+ +ID + T + APE++
Sbjct: 130 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 189
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G + + Y+ + +
Sbjct: 190 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 248
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFR 195
I L +P+ R T ++L+HP+ +
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN++ L + + DV ++ + + +L + E ++ +E+EA Q+ G++Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYL 130
Query: 69 HRQGYFHRDLKPSNLL-----VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H H DLKP N++ V K IKI D G+ +ID + T + APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G + + Y+ + +
Sbjct: 191 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFR 195
I L +P+ R T ++L+HP+ +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN++ L + + DV ++ + + +L + E ++ +E+EA Q+ G++Y+
Sbjct: 72 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYL 129
Query: 69 HRQGYFHRDLKPSNLL-----VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H H DLKP N++ V K IKI D G+ +ID + T + APE++
Sbjct: 130 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 189
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G + + Y+ + +
Sbjct: 190 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 248
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFR 195
I L +P+ R T ++L+HP+ +
Sbjct: 249 DFIRRLLVKDPKKRMTIQDSLQHPWIK 275
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN++ L + + DV ++ + + +L + E ++ +E+EA Q+ G++Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYL 130
Query: 69 HRQGYFHRDLKPSNLL-----VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H H DLKP N++ V K IKI D G+ +ID + T + APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G + + Y+ + +
Sbjct: 191 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFR 195
I L +P+ R T ++L+HP+ +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN++ L + + DV ++ + + +L + E ++ +E+EA Q+ G++Y+
Sbjct: 73 HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYL 130
Query: 69 HRQGYFHRDLKPSNLL-----VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H H DLKP N++ V K IKI D G+ +ID + T + APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G + + Y+ + +
Sbjct: 191 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFR 195
I L +P+ R T ++L+HP+ +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 16/150 (10%)
Query: 12 NIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQ 71
N VK VK+ +FI +Y E+ L + S N DE L Q+ + L Y+H Q
Sbjct: 76 NFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ 135
Query: 72 GYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPC---------------TDYVTTRW 115
G HRDLKP N+ + + +KIGD G+ K + SL T + T
Sbjct: 136 GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAM 195
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEML 145
Y A EVL + ++D +++G I FEM+
Sbjct: 196 YVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 98/222 (44%), Gaps = 31/222 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 120
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS TD T Y PE ++
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-TDLCGTLDYLPPE-MI 178
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 237
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEA 213
S L NP RP E LEHP+ + S P C N E+
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITAN----SSKPSNCQNKES 275
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLL-KLMKESAGQNFSEDEARNLCFQVFQGLH 66
NHP IVKL + ++++ D++ DL +L KE F+E++ + ++ L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM---FTEEDVKFYLAELALALD 140
Query: 67 YMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLL 124
++H G +RDLKP N+L+ +G IK+ D G+ KE ID + T Y APEV+
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISW 173
D W+ G +MFEML+ + F GK+ + + I + +L+
Sbjct: 201 RGHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRM 259
Query: 174 LCSWNPRMR----PTAAEALE-HPFFRSC 197
L NP R P E ++ H FF +
Sbjct: 260 LFKRNPANRLGAGPDGVEEIKRHSFFSTI 288
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLL-KLMKESAGQNFSEDEARNLCFQVFQGLH 66
NHP IVKL + ++++ D++ DL +L KE F+E++ + ++ L
Sbjct: 84 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM---FTEEDVKFYLAELALALD 140
Query: 67 YMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLL 124
++H G +RDLKP N+L+ +G IK+ D G+ KE ID + T Y APEV+
Sbjct: 141 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISW 173
D W+ G +MFEML+ + F GK+ + + I + +L+
Sbjct: 201 RGHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRM 259
Query: 174 LCSWNPRMR----PTAAEALE-HPFFRSC 197
L NP R P E ++ H FF +
Sbjct: 260 LFKRNPANRLGAGPDGVEEIKRHSFFSTI 288
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 71/150 (47%), Gaps = 16/150 (10%)
Query: 12 NIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQ 71
N VK VK+ +FI +Y E+ L + S N DE L Q+ + L Y+H Q
Sbjct: 76 NFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ 135
Query: 72 GYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPC---------------TDYVTTRW 115
G HRDLKP N+ + + +KIGD G+ K + SL T + T
Sbjct: 136 GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAM 195
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEML 145
Y A EVL + ++D +++G I FEM+
Sbjct: 196 YVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLL-KLMKESAGQNFSEDEARNLCFQVFQGLH 66
NHP IVKL + ++++ D++ DL +L KE F+E++ + ++ L
Sbjct: 85 NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM---FTEEDVKFYLAELALALD 141
Query: 67 YMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLL 124
++H G +RDLKP N+L+ +G IK+ D G+ KE ID + T Y APEV+
Sbjct: 142 HLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISW 173
D W+ G +MFEML+ + F GK+ + + I + +L+
Sbjct: 202 RGHT-QSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRM 260
Query: 174 LCSWNPRMR----PTAAEALE-HPFFRSC 197
L NP R P E ++ H FF +
Sbjct: 261 LFKRNPANRLGAGPDGVEEIKRHSFFSTI 289
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 96/207 (46%), Gaps = 24/207 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN++ L + + DV ++ + + +L + E ++ +E+EA Q+ G++Y+
Sbjct: 73 HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYL 130
Query: 69 HRQGYFHRDLKPSNLL-----VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H H DLKP N++ V K IKI D G+ +ID + T + APE++
Sbjct: 131 HSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVN 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI-------YKIYGRWVA------- 169
E G E D W++G I + +LS F G + + Y+ + +
Sbjct: 191 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAK 249
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFR 195
I L +P+ R T ++L+HP+ +
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIK 276
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 29/230 (12%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
HP + + + E++F V +Y+ L +S F A ++ GL ++H
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLH 136
Query: 70 RQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLLSEI 127
+G +RDLK N+L+ K G IKI D GM KE + ++ T Y APE+ LL +
Sbjct: 137 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEI-LLGQK 195
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI------YGRWVA-----LISWLCS 176
VD W+ G +++EML + F G++ + + I Y RW+ L+ L
Sbjct: 196 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFV 255
Query: 177 WNPRMR-PTAAEALEHPFFRSCH------------FVPR-SVPLLCNNFE 212
P R + +HP FR + F P+ P C+NF+
Sbjct: 256 REPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFD 305
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 99/224 (44%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 120
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T+ T Y PE ++
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR-TELCGTLDYLPPE-MI 178
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 237
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITAN----SSKPSNCQNKESAS 277
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMES-DLLKLMKESAGQ-NFSEDE 53
I + K NHPN+V R + + ++ + +Y E DL K + + E
Sbjct: 64 IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP 123
Query: 54 ARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG----VIKIGDLGMVKEIDSSLPCTD 109
R L + L Y+H HRDLKP N+++ G + KI DLG KE+D CT+
Sbjct: 124 IRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE 183
Query: 110 YVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS-FRILFP 152
+V T Y APE LL + VD W+ G + FE ++ FR P
Sbjct: 184 FVGTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 226
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 146
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS D T Y PE ++
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RDDLCGTLDYLPPE-MI 204
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 263
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 264 SRLLKHNPSQRPMLREVLEHPWITANS----SKPSNCQNKESAS 303
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 78/164 (47%), Gaps = 14/164 (8%)
Query: 2 IFLRKMNNHPNIVKLRNL------VKEHEDVFIVFDYMES-DLLKLMKESAGQ-NFSEDE 53
I + K NHPN+V R + + ++ + +Y E DL K + + E
Sbjct: 63 IQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP 122
Query: 54 ARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG----VIKIGDLGMVKEIDSSLPCTD 109
R L + L Y+H HRDLKP N+++ G + KI DLG KE+D CT+
Sbjct: 123 IRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE 182
Query: 110 YVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS-FRILFP 152
+V T Y APE LL + VD W+ G + FE ++ FR P
Sbjct: 183 FVGTLQYLAPE-LLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 8 NNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HP + L+ + H+ + V +Y L S + F+E+ AR ++ L Y
Sbjct: 65 TRHPFLTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEY 123
Query: 68 MHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLLS 125
+H + +RD+K NL++ K G IKI D G+ KE I + T Y APEVL +
Sbjct: 124 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 183
Query: 126 EICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISWL 174
+ G VD W +G +M+EM+ R+ F ++ I + +L++ L
Sbjct: 184 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL 242
Query: 175 CSWNPRMR-----PTAAEALEHPFFRSCHF 199
+P+ R A E +EH FF S ++
Sbjct: 243 LKKDPKQRLGGGPSDAKEVMEHRFFLSINW 272
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 88/165 (53%), Gaps = 16/165 (9%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V E ++I+ +YM + LL +K G + + Q+
Sbjct: 61 LMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA 120
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT-------TR 114
+G+ Y+ R+ Y HRDL+ +N+LVS+ ++ KI D G+ + I+ + +Y +
Sbjct: 121 EGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN----EYTAREGAKFPIK 176
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSAD 158
W APE + + D W+ G +++E++++ +I +PG+ +AD
Sbjct: 177 W-TAPEAINFGCFT-IKSDVWSFGILLYEIVTYGKIPYPGRTNAD 219
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 146
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T T Y PE ++
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPE-MI 204
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 205 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 263
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 264 SRLLKHNPSQRPMLREVLEHPWITAN----SSKPSNCQNKESAS 303
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 8 NNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HP + L+ + H+ + V +Y L S + F+E+ AR ++ L Y
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 68 MHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLLS 125
+H + +RD+K NL++ K G IKI D G+ KE I + T Y APEVL +
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 126 EICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISWL 174
+ G VD W +G +M+EM+ R+ F ++ I + +L++ L
Sbjct: 181 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL 239
Query: 175 CSWNPRMR-----PTAAEALEHPFFRSCHF 199
+P+ R A E +EH FF S ++
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 8 NNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HP + L+ + H+ + V +Y L S + F+E+ AR ++ L Y
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 68 MHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLLS 125
+H + +RD+K NL++ K G IKI D G+ KE I + T Y APEVL +
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN 180
Query: 126 EICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISWL 174
+ G VD W +G +M+EM+ R+ F ++ I + +L++ L
Sbjct: 181 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL 239
Query: 175 CSWNPRMR-----PTAAEALEHPFFRSCHF 199
+P+ R A E +EH FF S ++
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 137
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T T Y PE ++
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPE-MI 195
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 196 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 254
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 255 SRLLKHNPSQRPMLREVLEHPWITAN----SSKPSNCQNKESAS 294
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK------FDEQRTATYITELANA 125
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T T Y PE ++
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPE-MI 183
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITANS----SKPSNCQNKESAS 282
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 120
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T T Y PE ++
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPE-MI 178
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 237
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPWITAN----SSKPSNCQNKESAS 277
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 8 NNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HP + L+ + H+ + V +Y L S + F+E+ AR ++ L Y
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 68 MHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLLS 125
+H + +RD+K NL++ K G IKI D G+ KE I + T Y APEVL +
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 126 EICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISWL 174
+ G VD W +G +M+EM+ R+ F ++ I + +L++ L
Sbjct: 181 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL 239
Query: 175 CSWNPRMR-----PTAAEALEHPFFRSCHF 199
+P+ R A E +EH FF S ++
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 8 NNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HP + L+ + H+ + V +Y L S + F+E+ AR ++ L Y
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 68 MHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLLS 125
+H + +RD+K NL++ K G IKI D G+ KE I + T Y APEVL +
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 126 EICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISWL 174
+ G VD W +G +M+EM+ R+ F ++ I + +L++ L
Sbjct: 181 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL 239
Query: 175 CSWNPRMR-----PTAAEALEHPFFRSCHF 199
+P+ R A E +EH FF S ++
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 4 LRKMN--NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
LRK + N N++ + + + F+ + +L +L+K++ Q FS R +
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGVIKIGDLGMVKEIDSSLPCTDY------VTTRW 115
Q L +H+ H DLKP N+L+ + G G +K ID C ++ + +R+
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQ----GRSG-IKVIDFGSSCYEHQRVYTXIQSRF 264
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
YRAPEV+L + P +D W++G I+ E+L+ L PG++ DQ+
Sbjct: 265 YRAPEVILGARYGMP-IDMWSLGCILAELLTGYPLLPGEDEGDQL 308
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 4 LRKMN--NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
LRK + N N++ + + + F+ + +L +L+K++ Q FS R +
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGVIKIGDLGMVKEIDSSLPCTDY------VTTRW 115
Q L +H+ H DLKP N+L+ + G G +K ID C ++ + +R+
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQ----GRSG-IKVIDFGSSCYEHQRVYTXIQSRF 264
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
YRAPEV+L + P +D W++G I+ E+L+ L PG++ DQ+
Sbjct: 265 YRAPEVILGARYGMP-IDMWSLGCILAELLTGYPLLPGEDEGDQL 308
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 85/165 (51%), Gaps = 14/165 (8%)
Query: 4 LRKMN--NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
LRK + N N++ + + + F+ + +L +L+K++ Q FS R +
Sbjct: 150 LRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSI 209
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGVIKIGDLGMVKEIDSSLPCTDY------VTTRW 115
Q L +H+ H DLKP N+L+ + G G +K ID C ++ + +R+
Sbjct: 210 LQCLDALHKNRIIHCDLKPENILLKQQ----GRSG-IKVIDFGSSCYEHQRVYXXIQSRF 264
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
YRAPEV+L + P +D W++G I+ E+L+ L PG++ DQ+
Sbjct: 265 YRAPEVILGARYGMP-IDMWSLGCILAELLTGYPLLPGEDEGDQL 308
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 125
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T T Y PE ++
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPE-MI 183
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITAN----SSKPSNCQNKESAS 282
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 123
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T T Y PE ++
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPE-MI 181
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITAN----SSKPSNCQNKESAS 280
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 8 NNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HP + L+ + H+ + V +Y L S + F+E+ AR ++ L Y
Sbjct: 67 TRHPFLTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEY 125
Query: 68 MHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLLS 125
+H + +RD+K NL++ K G IKI D G+ KE I + T Y APEVL +
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 185
Query: 126 EICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISWL 174
+ G VD W +G +M+EM+ R+ F ++ I + +L++ L
Sbjct: 186 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL 244
Query: 175 CSWNPRMR-----PTAAEALEHPFFRSCHF 199
+P+ R A E +EH FF S ++
Sbjct: 245 LKKDPKQRLGGGPSDAKEVMEHRFFLSINW 274
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 101/230 (43%), Gaps = 29/230 (12%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
HP + + + E++F V +Y+ L +S F A ++ GL ++H
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSC-HKFDLSRATFYAAEIILGLQFLH 135
Query: 70 RQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLLSEI 127
+G +RDLK N+L+ K G IKI D GM KE + + T Y APE+ LL +
Sbjct: 136 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEI-LLGQK 194
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI------YGRWVA-----LISWLCS 176
VD W+ G +++EML + F G++ + + I Y RW+ L+ L
Sbjct: 195 YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFV 254
Query: 177 WNPRMR-PTAAEALEHPFFRSCH------------FVPR-SVPLLCNNFE 212
P R + +HP FR + F P+ P C+NF+
Sbjct: 255 REPEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFD 304
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 99/215 (46%), Gaps = 19/215 (8%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H N+V++ E+++++ ++++ L + N E++ +C V Q L Y+
Sbjct: 100 QHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLN--EEQIATVCEAVLQALAYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTD-YVTTRWYRAPEVLLLSE 126
H QG HRD+K ++L++ G +K+ D G +I +P V T ++ APEV+ S
Sbjct: 158 HAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRS- 216
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI--------------YKIYGRWVALIS 172
+ EVD W++G ++ EM+ + + + +K+ +
Sbjct: 217 LYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLE 276
Query: 173 WLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLL 207
+ +P+ R TA E L+HPF VPL+
Sbjct: 277 RMLVRDPQERATAQELLDHPFLLQTGLPECLVPLI 311
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 20/210 (9%)
Query: 8 NNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HP + L+ + H+ + V +Y L S + F+E+ AR ++ L Y
Sbjct: 62 TRHPFLTALKYAFQTHDRLCFVMEYANGGEL-FFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 68 MHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLLS 125
+H + +RD+K NL++ K G IKI D G+ KE I + T Y APEVL +
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN 180
Query: 126 EICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISWL 174
+ G VD W +G +M+EM+ R+ F ++ I + +L++ L
Sbjct: 181 DY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGL 239
Query: 175 CSWNPRMR-----PTAAEALEHPFFRSCHF 199
+P+ R A E +EH FF S ++
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I + K +HPNI++L +++ D+++V + L + + F E +A + V
Sbjct: 57 IEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL-FERVVHKRVFRESDAARIMKDV 115
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV----SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYR 117
+ Y H+ HRDLKP N L +K+ D G+ V T +Y
Sbjct: 116 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYV 175
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY--------GRWV- 168
+P+V L + GPE D W+ G +M+ +L F + + KI W+
Sbjct: 176 SPQV--LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLN 233
Query: 169 ------ALISWLCSWNPRMRPTAAEALEHPFF 194
+LI L + +P+ R T+ +ALEH +F
Sbjct: 234 VSPQAESLIRRLLTKSPKQRITSLQALEHEWF 265
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 94/212 (44%), Gaps = 22/212 (10%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
I + K +HPNI++L +++ D+++V + L + + F E +A + V
Sbjct: 74 IEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGEL-FERVVHKRVFRESDAARIMKDV 132
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV----SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYR 117
+ Y H+ HRDLKP N L +K+ D G+ V T +Y
Sbjct: 133 LSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYV 192
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY--------GRWV- 168
+P+V L + GPE D W+ G +M+ +L F + + KI W+
Sbjct: 193 SPQV--LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTFTFPEKDWLN 250
Query: 169 ------ALISWLCSWNPRMRPTAAEALEHPFF 194
+LI L + +P+ R T+ +ALEH +F
Sbjct: 251 VSPQAESLIRRLLTKSPKQRITSLQALEHEWF 282
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 105/224 (46%), Gaps = 42/224 (18%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLL--KLMKESAGQNFSEDEARNLCFQ 60
L + HPNI+ L+++ + + V++V + + L K++++ + FSE EA + F
Sbjct: 68 ILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQ---KFFSEREASAVLFT 124
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLV-----SKGVIKIGDLGMVKEIDSS-----LPCTDY 110
+ + + Y+H QG HRDLKPSN+L + I+I D G K++ + PC
Sbjct: 125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC--- 181
Query: 111 VTTRWYRAPEVLLLSEICGPEV--DRWAMGAIMFEMLSFRILF---PGKNSADQIYKI-- 163
T + APEVL E G + D W++G +++ L+ F P + + +I
Sbjct: 182 -YTANFVAPEVL---ERQGYDAACDIWSLGVLLYTXLTGYTPFANGPDDTPEEILARIGS 237
Query: 164 ------YGRWVA-------LISWLCSWNPRMRPTAAEALEHPFF 194
G W + L+S +P R TAA L HP+
Sbjct: 238 GKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 121
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T T Y PE ++
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT-LCGTLDYLPPE-MI 179
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 238
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPWITAN----SSKPSNCQNKESAS 278
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H N++ L ++ + DV ++ + + +L + + ++ SE+EA + Q+ G++Y+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYL 131
Query: 69 HRQGYFHRDLKPSNL-LVSKGV----IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H + H DLKP N+ L+ K + IK+ D G+ EI+ + + T + APE++
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-----------YGRWVAL-- 170
E G E D W++G I + +LS F G + + I + + L
Sbjct: 192 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 171 --ISWLCSWNPRMRPTAAEALEHP 192
I L R R T EAL HP
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HP IVKL ++I+ ++ + + + +E + + +C Q+ + L+++
Sbjct: 66 DHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL 125
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTD-YVTTRWYRAPEVLLLSE 126
H + HRDLK N+L++ +G I++ D G+ + +L D ++ T ++ APEV++
Sbjct: 126 HSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCET 185
Query: 127 ICGP----EVDRWAMGAIMFEMLSF----------RILFPGKNSADQIYKIYGRWVA--- 169
+ + D W++G + EM R+L S +W
Sbjct: 186 MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFR 245
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFRS 196
+ NP RP+AA+ LEHPF S
Sbjct: 246 DFLKIALDKNPETRPSAAQLLEHPFVSS 273
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 20/208 (9%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HP IVKL ++I+ ++ + + + +E + + +C Q+ + L+++
Sbjct: 74 DHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFL 133
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTD-YVTTRWYRAPEVLLLSE 126
H + HRDLK N+L++ +G I++ D G+ + +L D ++ T ++ APEV++
Sbjct: 134 HSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCET 193
Query: 127 ICGP----EVDRWAMGAIMFEMLSF----------RILFPGKNSADQIYKIYGRWVA--- 169
+ + D W++G + EM R+L S +W
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFR 253
Query: 170 -LISWLCSWNPRMRPTAAEALEHPFFRS 196
+ NP RP+AA+ LEHPF S
Sbjct: 254 DFLKIALDKNPETRPSAAQLLEHPFVSS 281
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 8 NNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+ HP + L+ + H+ + V +Y L S + FSED AR ++ L Y
Sbjct: 66 SRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDY 124
Query: 68 MH-RQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLL 124
+H + +RDLK NL++ K G IKI D G+ KE I + T Y APEVL
Sbjct: 125 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED 184
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISW 173
++ G VD W +G +M+EM+ R+ F ++ I + +L+S
Sbjct: 185 NDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSG 243
Query: 174 LCSWNPRMR-----PTAAEALEHPFF 194
L +P+ R A E ++H FF
Sbjct: 244 LLKKDPKQRLGGGSEDAKEIMQHRFF 269
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 8 NNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+ HP + L+ + H+ + V +Y L S + FSED AR ++ L Y
Sbjct: 65 SRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 68 MH-RQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLL 124
+H + +RDLK NL++ K G IKI D G+ KE I + T Y APEVL
Sbjct: 124 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED 183
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISW 173
++ G VD W +G +M+EM+ R+ F ++ I + +L+S
Sbjct: 184 NDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSG 242
Query: 174 LCSWNPRMR-----PTAAEALEHPFF 194
L +P+ R A E ++H FF
Sbjct: 243 LLKKDPKQRLGGGSEDAKEIMQHRFF 268
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 8 NNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+ HP + L+ + H+ + V +Y L S + FSED AR ++ L Y
Sbjct: 67 SRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 68 MH-RQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLL 124
+H + +RDLK NL++ K G IKI D G+ KE I + T Y APEVL
Sbjct: 126 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLED 185
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISW 173
++ G VD W +G +M+EM+ R+ F ++ I + +L+S
Sbjct: 186 NDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSG 244
Query: 174 LCSWNPRMR-----PTAAEALEHPFF 194
L +P+ R A E ++H FF
Sbjct: 245 LLKKDPKQRLGGGSEDAKEIMQHRFF 270
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H N++ L ++ + DV ++ + + +L + + ++ SE+EA + Q+ G++Y+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYL 131
Query: 69 HRQGYFHRDLKPSNL-LVSKGV----IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H + H DLKP N+ L+ K + IK+ D G+ EI+ + + T + APE++
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------YGRWVA- 169
E G E D W++G I + +LS F G + + I + +A
Sbjct: 192 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 170 -LISWLCSWNPRMRPTAAEALEHP 192
I L R R T EAL HP
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 96/224 (42%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 125
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T T Y PE +
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPEX-I 183
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 184 EGRXHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 243 SRLLKHNPSQRPXLREVLEHPWITAN----SSKPSNCQNKESAS 282
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H N++ L ++ + DV ++ + + +L + + ++ SE+EA + Q+ G++Y+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYL 131
Query: 69 HRQGYFHRDLKPSNL-LVSKGV----IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H + H DLKP N+ L+ K + IK+ D G+ EI+ + + T + APE++
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-----------YGRWVAL-- 170
E G E D W++G I + +LS F G + + I + + L
Sbjct: 192 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAK 250
Query: 171 --ISWLCSWNPRMRPTAAEALEHP 192
I L R R T EAL HP
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 97/224 (43%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 123
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T Y PE ++
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA-LCGTLDYLPPE-MI 181
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPWITAN----SSKPSNCQNKESAS 280
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 37/212 (17%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
HP +V L + ++ ++ +++++M L SEDEA QV +GL +MH
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 70 RQGYFHRDLKPSNLLVS---KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
Y H DLKP N++ + +K+ D G+ +D T + APEV
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKP 332
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCSWN-------- 178
+ G D W++G + + +LS F G+N + + + C WN
Sbjct: 333 V-GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKS---------CDWNMDDSAFSG 382
Query: 179 ----------------PRMRPTAAEALEHPFF 194
P R T +ALEHP+
Sbjct: 383 ISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 414
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 8 NNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+ HP + L+ + H+ + V +Y L S + FSED AR ++ L Y
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDY 263
Query: 68 MH-RQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLL 124
+H + +RDLK NL++ K G IKI D G+ KE I + T Y APEVL
Sbjct: 264 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED 323
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISW 173
++ G VD W +G +M+EM+ R+ F ++ I + +L+S
Sbjct: 324 NDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSG 382
Query: 174 LCSWNPRMR-----PTAAEALEHPFF 194
L +P+ R A E ++H FF
Sbjct: 383 LLKKDPKQRLGGGSEDAKEIMQHRFF 408
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 87/203 (42%), Gaps = 19/203 (9%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
HP +V L + ++ ++ +++++M L SEDEA QV +GL +MH
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 70 RQGYFHRDLKPSNLLVS---KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
Y H DLKP N++ + +K+ D G+ +D T + APEV +
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEV-AEGK 225
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG-RW--------------VALI 171
G D W++G + + +LS F G+N + + + W I
Sbjct: 226 PVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFI 285
Query: 172 SWLCSWNPRMRPTAAEALEHPFF 194
L +P R T +ALEHP+
Sbjct: 286 RKLLLADPNTRMTIHQALEHPWL 308
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H N++ L ++ + DV ++ + + +L + + ++ SE+EA + Q+ G++Y+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYL 131
Query: 69 HRQGYFHRDLKPSNL-LVSKGV----IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H + H DLKP N+ L+ K + IK+ D G+ EI+ + + T + APE++
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------YGRWVA- 169
E G E D W++G I + +LS F G + + I + +A
Sbjct: 192 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 170 -LISWLCSWNPRMRPTAAEALEHP 192
I L R R T EAL HP
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 98/224 (43%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 122
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI + G SS T T Y PE ++
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT-LCGTLDYLPPE-MI 180
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 239
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 240 SRLLKHNPSQRPMLREVLEHPWITAN----SSKPSNCQNKESAS 279
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 94/206 (45%), Gaps = 21/206 (10%)
Query: 8 NNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+ HP + L+ + H+ + V +Y L S + FSED AR ++ L Y
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGEL-FFHLSRERVFSEDRARFYGAEIVSALDY 266
Query: 68 MH-RQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLL 124
+H + +RDLK NL++ K G IKI D G+ KE I + T Y APEVL
Sbjct: 267 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLED 326
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV-----------ALISW 173
++ G VD W +G +M+EM+ R+ F ++ I + +L+S
Sbjct: 327 NDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGPEAKSLLSG 385
Query: 174 LCSWNPRMR-----PTAAEALEHPFF 194
L +P+ R A E ++H FF
Sbjct: 386 LLKKDPKQRLGGGSEDAKEIMQHRFF 411
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H N++ L ++ + DV ++ + + +L + + ++ SE+EA + Q+ G++Y+
Sbjct: 74 HHNVITLHDVYENRTDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYL 131
Query: 69 HRQGYFHRDLKPSNL-LVSKGV----IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
H + H DLKP N+ L+ K + IK+ D G+ EI+ + + T + APE++
Sbjct: 132 HTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVN 191
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI-------------YGRWVA- 169
E G E D W++G I + +LS F G + + I + +A
Sbjct: 192 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAK 250
Query: 170 -LISWLCSWNPRMRPTAAEALEHP 192
I L R R T EAL HP
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHP 274
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
N P +VKL K++ ++++V +YM D+ ++ FSE AR Q+ Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 68 MHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+H +RDLKP NLL+ +G IK+ D G K + T Y APE+ +LS+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSK 213
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 70/150 (46%), Gaps = 16/150 (10%)
Query: 12 NIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQ 71
N VK VK+ +FI +Y E+ L + S N DE L Q+ + L Y+H Q
Sbjct: 76 NFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ 135
Query: 72 GYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPC---------------TDYVTTRW 115
G HR+LKP N+ + + +KIGD G+ K + SL T + T
Sbjct: 136 GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAX 195
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEML 145
Y A EVL + ++D +++G I FE +
Sbjct: 196 YVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
N P +VKL K++ ++++V +YM D+ ++ FSE AR Q+ Y
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIG--RFSEPHARFYAAQIVLTFEY 156
Query: 68 MHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+H +RDLKP NLL+ +G IK+ D G K + T Y APE+ +LS+
Sbjct: 157 LHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSK 213
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 214 GYNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 97/224 (43%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK------FDEQRTATYITELANA 125
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T Y PE ++
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX-LXGTLDYLPPE-MI 183
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 184 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 242
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 243 SRLLKHNPSQRPMLREVLEHPWITAN----SSKPSNCQNKESAS 282
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 82/158 (51%), Gaps = 11/158 (6%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HP I+++ ++ + +F++ DY+E +L L+++S Q F A+ +V L Y+
Sbjct: 65 HPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYL 122
Query: 69 HRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDYV--TTRWYRAPEVLLLS 125
H + +RDLKP N+L+ K G IKI D G K + P Y T Y APEV + +
Sbjct: 123 HSKDIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYXLCGTPDYIAPEV-VST 177
Query: 126 EICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
+ +D W+ G +++EML+ F N+ KI
Sbjct: 178 KPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI 215
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 89/165 (53%), Gaps = 16/165 (9%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V + E ++I+ ++M + LL +K G + + Q+
Sbjct: 60 LMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIA 119
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT-------TR 114
+G+ Y+ R+ Y HRDL+ +N+LVS+ ++ KI D G+ + I+ + +Y +
Sbjct: 120 EGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDN----EYTAREGAKFPIK 175
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSAD 158
W APE + + + W+ G +++E++++ +I +PG+ +AD
Sbjct: 176 W-TAPEAINFGCFT-IKSNVWSFGILLYEIVTYGKIPYPGRTNAD 218
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 84/160 (52%), Gaps = 9/160 (5%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H +V+L +V E E ++IV +YM + LL +K+ G+ ++ QV G+ Y+
Sbjct: 63 HDKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYI 121
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTT---RWYRAPEVLLL 124
R Y HRDL+ +N+LV G+I KI D G+ + I+ + +W APE L
Sbjct: 122 ERMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKW-TAPEAALY 180
Query: 125 SEICGPEVDRWAMGAIMFEMLS-FRILFPGKNSADQIYKI 163
+ D W+ G ++ E+++ R+ +PG N+ + + ++
Sbjct: 181 GRFT-IKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQV 219
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 27/202 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 123
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS D T Y PE ++
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RDDLCGTLDYLPPE-MI 181
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 172 SWLCSWNPRMRPTAAEALEHPF 193
S L NP RP E LEHP+
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPW 262
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 27/202 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 124
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T T Y PE ++
Sbjct: 125 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPE-MI 182
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 183 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 241
Query: 172 SWLCSWNPRMRPTAAEALEHPF 193
S L NP RP E LEHP+
Sbjct: 242 SRLLKHNPSQRPMLREVLEHPW 263
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 27/202 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 119
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T T Y PE ++
Sbjct: 120 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPE-MI 177
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 178 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 236
Query: 172 SWLCSWNPRMRPTAAEALEHPF 193
S L NP RP E LEHP+
Sbjct: 237 SRLLKHNPSQRPMLREVLEHPW 258
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 27/202 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 123
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T T Y PE ++
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPE-MI 181
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 172 SWLCSWNPRMRPTAAEALEHPF 193
S L NP RP E LEHP+
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPW 262
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDY---MESDLLKLMKESAGQNFSEDEARNLCF 59
FL+K+ HPN ++ R ++V +Y SDLL++ K+ E E +
Sbjct: 107 FLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAAVTH 161
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRA 118
QGL Y+H HRD+K N+L+S+ G++K+GD G + P +V T ++ A
Sbjct: 162 GALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM---APANXFVGTPYWMA 218
Query: 119 PEVLLLSEIC--GPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY---------GRW 167
PEV+L + +VD W++G E+ + N+ +Y I G W
Sbjct: 219 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW 278
Query: 168 VA----LISWLCSWNPRMRPTAAEALEHPF 193
+ P+ RPT+ L+H F
Sbjct: 279 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 97/224 (43%), Gaps = 31/224 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 122
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T Y PE ++
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX-LCGTLDYLPPE-MI 180
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 181 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 239
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVA 215
S L NP RP E LEHP+ + S P C N E+ +
Sbjct: 240 SRLLKHNPSQRPMLREVLEHPWITAN----SSKPSNCQNKESAS 279
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 27/202 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 117
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T T Y PE ++
Sbjct: 118 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPE-MI 175
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 176 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 234
Query: 172 SWLCSWNPRMRPTAAEALEHPF 193
S L NP RP E LEHP+
Sbjct: 235 SRLLKHNPSQRPMLREVLEHPW 256
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 27/202 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 121
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T T Y PE ++
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTT-LSGTLDYLPPE-MI 179
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 180 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 238
Query: 172 SWLCSWNPRMRPTAAEALEHPF 193
S L NP RP E LEHP+
Sbjct: 239 SRLLKHNPSQRPMLREVLEHPW 260
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 27/210 (12%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDY---MESDLLKLMKESAGQNFSEDEARNLCF 59
FL+K+ HPN ++ R ++V +Y SDLL++ K+ E E +
Sbjct: 68 FLQKLR-HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKP----LQEVEIAAVTH 122
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRA 118
QGL Y+H HRD+K N+L+S+ G++K+GD G + P +V T ++ A
Sbjct: 123 GALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM---APANXFVGTPYWMA 179
Query: 119 PEVLLLSEIC--GPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY---------GRW 167
PEV+L + +VD W++G E+ + N+ +Y I G W
Sbjct: 180 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW 239
Query: 168 VA----LISWLCSWNPRMRPTAAEALEHPF 193
+ P+ RPT+ L+H F
Sbjct: 240 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 7 MNNHPNIVKLRNLVKEHEDVFIVFDYME-SDL-LKLMKES-AGQNFSEDEARNLCFQVFQ 63
M HP+IV+L +++VF++M+ +DL +++K + AG +SE A + Q+ +
Sbjct: 84 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 143
Query: 64 GLHYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEI-DSSLPCTDYVTTRWYRA 118
L Y H HRD+KP +L++ +K+G G+ ++ +S L V T + A
Sbjct: 144 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 203
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLS------------FRILFPGKNSAD--QIYKIY 164
PEV + E G VD W G I+F +LS F + GK + Q I
Sbjct: 204 PEV-VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHIS 262
Query: 165 GRWVALISWLCSWNPRMRPTAAEALEHPFFR 195
L+ + +P R T EAL HP+ +
Sbjct: 263 ESAKDLVRRMLMLDPAERITVYEALNHPWLK 293
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 100/211 (47%), Gaps = 23/211 (10%)
Query: 7 MNNHPNIVKLRNLVKEHEDVFIVFDYME-SDL-LKLMKES-AGQNFSEDEARNLCFQVFQ 63
M HP+IV+L +++VF++M+ +DL +++K + AG +SE A + Q+ +
Sbjct: 82 MLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILE 141
Query: 64 GLHYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEI-DSSLPCTDYVTTRWYRA 118
L Y H HRD+KP +L++ +K+G G+ ++ +S L V T + A
Sbjct: 142 ALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMA 201
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLS------------FRILFPGKNSAD--QIYKIY 164
PEV + E G VD W G I+F +LS F + GK + Q I
Sbjct: 202 PEV-VKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGIIKGKYKMNPRQWSHIS 260
Query: 165 GRWVALISWLCSWNPRMRPTAAEALEHPFFR 195
L+ + +P R T EAL HP+ +
Sbjct: 261 ESAKDLVRRMLMLDPAERITVYEALNHPWLK 291
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 103/218 (47%), Gaps = 27/218 (12%)
Query: 3 FLRKMNNHPNIVKLRNLV--KEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQ 60
LR++ H N+++L +++ +E + +++V +Y + +++ + F +A Q
Sbjct: 59 LLRRLR-HKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQ 117
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEID---SSLPCTDYVTTRWY 116
+ GL Y+H QG H+D+KP NLL++ G +KI LG+ + + + C + +
Sbjct: 118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 117 RAPEVL-LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY-----GRWVA- 169
+ PE+ L G +VD W+ G ++ + + F G D IYK++ G +
Sbjct: 178 QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG----DNIYKLFENIGKGSYAIP 233
Query: 170 ---------LISWLCSWNPRMRPTAAEALEHPFFRSCH 198
L+ + + P R + + +H +FR H
Sbjct: 234 GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKH 271
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 90/202 (44%), Gaps = 27/202 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 120
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T T Y PE ++
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR-RTXLCGTLDYLPPE-MI 178
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 237
Query: 172 SWLCSWNPRMRPTAAEALEHPF 193
S L NP RP E LEHP+
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPW 259
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 78/147 (53%), Gaps = 12/147 (8%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLK-LMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HPNI+ L +V + + V IV +YME+ L +K++ GQ F+ + + + G+ Y
Sbjct: 81 DHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLRGISAGMKY 139
Query: 68 MHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPE 120
+ GY HRDL N+L++ ++ K+ D G+ + ++ P Y T RW APE
Sbjct: 140 LSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-PEAAYTTRGGKIPIRW-TAPE 197
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +M+E++S+
Sbjct: 198 AIAFRKFTSAS-DVWSYGIVMWEVVSY 223
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 23/206 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPNIV L ++ + ++++ + +L + E ++E +A L FQV + Y
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAVKY 131
Query: 68 MHRQGYFHRDLKPSNLLV----SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
+H G HRDLKP NLL I I D G+ K D + T Y APEV L
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEV-L 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA---DQIYK------------IYGRWV 168
+ VD W++G I + +L F +N A +QI K I
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 169 ALISWLCSWNPRMRPTAAEALEHPFF 194
I L +P R T +AL+HP+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 75/149 (50%), Gaps = 20/149 (13%)
Query: 11 PNIVKL----RNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
P+IV++ NL + + IV + ++ +L +++ Q F+E EA + + + +
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 66 HYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
Y+H HRD+KP NLL + ++K+ D G KE S T+ T +Y APEV
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEV 188
Query: 122 LLLSEICGPE-----VDRWAMGAIMFEML 145
L GPE D W++G IM+ +L
Sbjct: 189 L------GPEKYDKSCDMWSLGVIMYILL 211
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI++L +V IV +YME+ L + F+ + + V G+ Y+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTT------RWYRAPEV 121
GY HRDL N+LV ++ K+ D G+ + ++ P Y TT RW APE
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD-PDAAYTTTGGKIPIRWT-APEA 225
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ D W+ G +M+E+L++
Sbjct: 226 IAFRTFSSAS-DVWSFGVVMWEVLAY 250
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 102/230 (44%), Gaps = 21/230 (9%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + + N +PNIV + +++++V +Y+ L ++ E+ E + +C +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRE 124
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEID-SSLPCTDYVTTRWYRA 118
Q L ++H HRD+K N+L+ G +K+ D G +I ++ V T ++ A
Sbjct: 125 CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMA 184
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIY--------------KIY 164
PEV + + GP+VD W++G + EM+ + +N +Y K+
Sbjct: 185 PEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243
Query: 165 GRWVALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAV 214
+ ++ + R +A E L+H F + + PL+ EA
Sbjct: 244 AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEAT 293
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
HPNIV+ + ++ + IV +Y L +AG+ FSEDEAR Q+ G+ Y H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYAH 132
Query: 70 RQGYFHRDLKPSNLLVSKGV---IKIGDLGMVK-EIDSSLPCTDYVTTRWYRAPEVLLLS 125
HRDLK N L+ +KI D G K + S P + V T Y APEVLL
Sbjct: 133 AMQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKS-AVGTPAYIAPEVLLKK 191
Query: 126 EICGPEVDRWAMGAIMFEML 145
E G D W+ G ++ ML
Sbjct: 192 EYDGKVADVWSCGVTLYVML 211
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 23/206 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPNIV L ++ + ++++ + +L + E ++E +A L FQV + Y
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAVKY 131
Query: 68 MHRQGYFHRDLKPSNLLV----SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
+H G HRDLKP NLL I I D G+ K D + T Y APEV L
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEV-L 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA---DQIYK------------IYGRWV 168
+ VD W++G I + +L F +N A +QI K I
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 169 ALISWLCSWNPRMRPTAAEALEHPFF 194
I L +P R T +AL+HP+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 23/206 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPNIV L ++ + ++++ + +L + E ++E +A L FQV + Y
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAVKY 131
Query: 68 MHRQGYFHRDLKPSNLLV----SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
+H G HRDLKP NLL I I D G+ K D + T Y APEV L
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEV-L 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA---DQIYK------------IYGRWV 168
+ VD W++G I + +L F +N A +QI K I
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 169 ALISWLCSWNPRMRPTAAEALEHPFF 194
I L +P R T +AL+HP+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 90/202 (44%), Gaps = 27/202 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 123
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI + G SS T T Y PE ++
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTT-LCGTLDYLPPE-MI 181
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 172 SWLCSWNPRMRPTAAEALEHPF 193
S L NP RP E LEHP+
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPW 262
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 87/201 (43%), Gaps = 25/201 (12%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 67 HPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 120
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T Y PE ++
Sbjct: 121 LSYCHSKKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA-LCGTLDYLPPE-MI 178
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI------YGRWVA-----LIS 172
+ +VD W++G + +E L + F D +I + +V LIS
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRISRVEFTFPDFVTEGARDLIS 238
Query: 173 WLCSWNPRMRPTAAEALEHPF 193
L NP RP E LEHP+
Sbjct: 239 RLLKHNPSQRPMLREVLEHPW 259
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 89/206 (43%), Gaps = 23/206 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPNIV L ++ + ++++ + +L + E ++E +A L FQV + Y
Sbjct: 74 KHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAVKY 131
Query: 68 MHRQGYFHRDLKPSNLLV----SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
+H G HRDLKP NLL I I D G+ K D + T Y APEV L
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEV-L 190
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA---DQIYK------------IYGRWV 168
+ VD W++G I + +L F +N A +QI K I
Sbjct: 191 AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAK 250
Query: 169 ALISWLCSWNPRMRPTAAEALEHPFF 194
I L +P R T +AL+HP+
Sbjct: 251 DFIRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 27/202 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 120
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T Y PE ++
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAA-LCGTLDYLPPE-MI 178
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 237
Query: 172 SWLCSWNPRMRPTAAEALEHPF 193
S L NP RP E LEHP+
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPW 259
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPN+V L +V + V IV ++ME+ L F+ + + + G+ Y+
Sbjct: 102 DHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL 161
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTT------RWYRAPEV 121
GY HRDL N+LV+ ++ K+ D G+ + I+ P Y TT RW APE
Sbjct: 162 ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD-PEAVYTTTGGKIPVRW-TAPEA 219
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +M+E++S+
Sbjct: 220 IQYRKFTSAS-DVWSYGIVMWEVMSY 244
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 22/208 (10%)
Query: 7 MNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLH 66
++ P + +L + + + ++ V +Y+ L + G+ F E +A ++ GL
Sbjct: 76 LDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK-FKEPQAVFYAAEISIGLF 134
Query: 67 YMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLL 124
++H++G +RDLK N+++ S+G IKI D GM KE + + ++ T Y APE++
Sbjct: 135 FLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAY 194
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYK------------IYGRWVALIS 172
G VD WA G +++EML+ + F G++ D++++ + V++
Sbjct: 195 QPY-GKSVDWWAYGVLLYEMLAGQPPFDGEDE-DELFQSIMEHNVSYPKSLSKEAVSICK 252
Query: 173 WLCSWNPRMR----PTAA-EALEHPFFR 195
L + +P R P + EH FFR
Sbjct: 253 GLMTKHPAKRLGCGPEGERDVREHAFFR 280
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G IK+ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 20/149 (13%)
Query: 11 PNIVKL----RNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
P+IV++ NL + + IV + ++ +L +++ Q F+E EA + + + +
Sbjct: 76 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 135
Query: 66 HYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
Y+H HRD+KP NLL + ++K+ D G KE S T T +Y APEV
Sbjct: 136 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 195
Query: 122 LLLSEICGPE-----VDRWAMGAIMFEML 145
L GPE D W++G IM+ +L
Sbjct: 196 L------GPEKYDKSCDMWSLGVIMYILL 218
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 77/159 (48%), Gaps = 15/159 (9%)
Query: 49 FSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI-DSSLP 106
F E + + ++ +GL Y+H + HRD+K +N+L+S +G +K+ D G+ ++ D+ +
Sbjct: 117 FDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIK 176
Query: 107 CTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFE----------MLSFRILF--PGK 154
+V T ++ APEV+ S + D W++G E M R+LF P
Sbjct: 177 RNTFVGTPFWMAPEVIQQSA-YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN 235
Query: 155 NSADQIYKIYGRWVALISWLCSWNPRMRPTAAEALEHPF 193
N + + I + +P RPTA E L+H F
Sbjct: 236 NPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKF 274
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 20/149 (13%)
Query: 11 PNIVKL----RNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
P+IV++ NL + + IV + ++ +L +++ Q F+E EA + + + +
Sbjct: 77 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 136
Query: 66 HYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
Y+H HRD+KP NLL + ++K+ D G KE S T T +Y APEV
Sbjct: 137 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 196
Query: 122 LLLSEICGPE-----VDRWAMGAIMFEML 145
L GPE D W++G IM+ +L
Sbjct: 197 L------GPEKYDKSCDMWSLGVIMYILL 219
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 20/149 (13%)
Query: 11 PNIVKL----RNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
P+IV++ NL + + IV + ++ +L +++ Q F+E EA + + + +
Sbjct: 85 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 144
Query: 66 HYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
Y+H HRD+KP NLL + ++K+ D G KE S T T +Y APEV
Sbjct: 145 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 204
Query: 122 LLLSEICGPE-----VDRWAMGAIMFEML 145
L GPE D W++G IM+ +L
Sbjct: 205 L------GPEKYDKSCDMWSLGVIMYILL 227
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 20/149 (13%)
Query: 11 PNIVKL----RNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
P+IV++ NL + + IV + ++ +L +++ Q F+E EA + + + +
Sbjct: 75 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 134
Query: 66 HYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
Y+H HRD+KP NLL + ++K+ D G KE S T T +Y APEV
Sbjct: 135 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 194
Query: 122 LLLSEICGPE-----VDRWAMGAIMFEML 145
L GPE D W++G IM+ +L
Sbjct: 195 L------GPEKYDKSCDMWSLGVIMYILL 217
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 20/149 (13%)
Query: 11 PNIVKL----RNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
P+IV++ NL + + IV + ++ +L +++ Q F+E EA + + + +
Sbjct: 69 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 66 HYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
Y+H HRD+KP NLL + ++K+ D G KE S T T +Y APEV
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 188
Query: 122 LLLSEICGPE-----VDRWAMGAIMFEML 145
L GPE D W++G IM+ +L
Sbjct: 189 L------GPEKYDKSCDMWSLGVIMYILL 211
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 20/149 (13%)
Query: 11 PNIVKL----RNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
P+IV++ NL + + IV + ++ +L +++ Q F+E EA + + + +
Sbjct: 70 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 129
Query: 66 HYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
Y+H HRD+KP NLL + ++K+ D G KE S T T +Y APEV
Sbjct: 130 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 189
Query: 122 LLLSEICGPE-----VDRWAMGAIMFEML 145
L GPE D W++G IM+ +L
Sbjct: 190 L------GPEKYDKSCDMWSLGVIMYILL 212
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y + G+ FSE AR Q+ Y+
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G IK+ D G K + T Y APE+ +LS+
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 215
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 253
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 23/231 (9%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + + N +PNIV + +++++V +Y+ L ++ E+ E + +C +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRE 124
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI--DSSLPCTDYVTTRWYR 117
Q L ++H HRD+K N+L+ G +K+ D G +I + S T V T ++
Sbjct: 125 CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWM 183
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIY--------------KI 163
APEV + + GP+VD W++G + EM+ + +N +Y K+
Sbjct: 184 APEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 242
Query: 164 YGRWVALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAV 214
+ ++ + R +A E L+H F + + PL+ EA
Sbjct: 243 SAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEAT 293
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 20/149 (13%)
Query: 11 PNIVKL----RNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
P+IV++ NL + + IV + ++ +L +++ Q F+E EA + + + +
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 174
Query: 66 HYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
Y+H HRD+KP NLL + ++K+ D G KE S T T +Y APEV
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 234
Query: 122 LLLSEICGPE-----VDRWAMGAIMFEML 145
L GPE D W++G IM+ +L
Sbjct: 235 L------GPEKYDKSCDMWSLGVIMYILL 257
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 20/149 (13%)
Query: 11 PNIVKL----RNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
P+IV++ NL + + IV + ++ +L +++ Q F+E EA + + + +
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 66 HYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
Y+H HRD+KP NLL + ++K+ D G KE S T T +Y APEV
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 190
Query: 122 LLLSEICGPE-----VDRWAMGAIMFEML 145
L GPE D W++G IM+ +L
Sbjct: 191 L------GPEKYDKSCDMWSLGVIMYILL 213
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 20/149 (13%)
Query: 11 PNIVKL----RNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
P+IV++ NL + + IV + ++ +L +++ Q F+E EA + + + +
Sbjct: 121 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 180
Query: 66 HYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
Y+H HRD+KP NLL + ++K+ D G KE S T T +Y APEV
Sbjct: 181 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 240
Query: 122 LLLSEICGPE-----VDRWAMGAIMFEML 145
L GPE D W++G IM+ +L
Sbjct: 241 L------GPEKYDKSCDMWSLGVIMYILL 263
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 21/230 (9%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + + N +PNIV + +++++V +Y+ L ++ E+ E + +C +
Sbjct: 68 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRE 124
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEID-SSLPCTDYVTTRWYRA 118
Q L ++H HRD+K N+L+ G +K+ D G +I + V T ++ A
Sbjct: 125 CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMA 184
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIY--------------KIY 164
PEV + + GP+VD W++G + EM+ + +N +Y K+
Sbjct: 185 PEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 243
Query: 165 GRWVALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAV 214
+ ++ + R +A E L+H F + + PL+ EA
Sbjct: 244 AIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLIAAAKEAT 293
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 74/149 (49%), Gaps = 20/149 (13%)
Query: 11 PNIVKL----RNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
P+IV++ NL + + IV + ++ +L +++ Q F+E EA + + + +
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 66 HYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
Y+H HRD+KP NLL + ++K+ D G KE S T T +Y APEV
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 190
Query: 122 LLLSEICGPE-----VDRWAMGAIMFEML 145
L GPE D W++G IM+ +L
Sbjct: 191 L------GPEKYDKSCDMWSLGVIMYILL 213
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 97/207 (46%), Gaps = 13/207 (6%)
Query: 1 MIFLRKMNN-HPNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + ME DL + E E+ AR+
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGA--LQEELARSF 119
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 178
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA--DQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 238
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRSC 197
I W + P RPT E HP+ +
Sbjct: 239 IRWCLALRPSDRPTFEEIQNHPWMQDV 265
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 178
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + + T Y APE+ +LS+
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGA--TWTLCGTPEYLAPEI-ILSKG 235
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 273
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 85/163 (52%), Gaps = 10/163 (6%)
Query: 3 FLRKMNN-----HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
F R+++N H NIV + ++ +E + ++V +Y+E L ES G S D A N
Sbjct: 58 FEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGP-LSVDTAINF 116
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEI-DSSLPCTDYV-TTR 114
Q+ G+ + H HRD+KP N+L+ S +KI D G+ K + ++SL T++V T
Sbjct: 117 TNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTV 176
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA 157
Y +PE E D +++G +++EML F G+ +
Sbjct: 177 QYFSPE-QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV 218
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 99/214 (46%), Gaps = 21/214 (9%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
N P +V+L ++ + +++V +YM DL+ LM + + E A+ +V L
Sbjct: 133 NSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLM---SNYDVPEKWAKFYTAEVVLALDA 189
Query: 68 MHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSS--LPCTDYVTTRWYRAPEVLLL 124
+H G HRD+KP N+L+ K G +K+ D G ++D + + C V T Y +PEVL
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKS 249
Query: 125 ---SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCSWNPRM 181
G E D W++G +FEML F AD + Y + + + LC
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVGDTPF----YADSLVGTYSKIMDHKNSLCF----- 300
Query: 182 RPTAAEALEHPFFRSCHFV-PRSVPLLCNNFEAV 214
P AE +H C F+ R V L N E +
Sbjct: 301 -PEDAEISKHAKNLICAFLTDREVRLGRNGVEEI 333
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 27/202 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 120
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T Y PE ++
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX-LCGTLDYLPPE-MI 178
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 179 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 237
Query: 172 SWLCSWNPRMRPTAAEALEHPF 193
S L NP RP E LEHP+
Sbjct: 238 SRLLKHNPSQRPMLREVLEHPW 259
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 89/202 (44%), Gaps = 27/202 (13%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY-----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
HPNI++L + V+++ +Y + +L KL K F E ++
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK------FDEQRTATYITELANA 123
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
L Y H + HRD+KP NLL+ S G +KI D G SS T Y PE ++
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXX-LCGTLDYLPPE-MI 181
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR-------WVA-----LI 171
+ +VD W++G + +E L + F N+ + YK R +V LI
Sbjct: 182 EGRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQETYKRISRVEFTFPDFVTEGARDLI 240
Query: 172 SWLCSWNPRMRPTAAEALEHPF 193
S L NP RP E LEHP+
Sbjct: 241 SRLLKHNPSQRPMLREVLEHPW 262
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 148
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 209 EKSAC-KSSDLWALGCIIYQLVA 230
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 65/139 (46%), Gaps = 4/139 (2%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
HPNIV+ + ++ + I+ +Y L +AG+ FSEDEAR Q+ G+ Y H
Sbjct: 75 HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR-FSEDEARFFFQQLLSGVSYCH 133
Query: 70 RQGYFHRDLKPSNLLVSKGV---IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
HRDLK N L+ +KI D G K V T Y APEVLL E
Sbjct: 134 SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQE 193
Query: 127 ICGPEVDRWAMGAIMFEML 145
G D W+ G ++ ML
Sbjct: 194 YDGKIADVWSCGVTLYVML 212
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVF--IVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L+ + PNIVKL ++V++ ++F+Y+ + K++ + ++ + R +++
Sbjct: 100 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYEL 155
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGV--IKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H QG HRD+KP N+++ + +++ D G+ + V +R+++ P
Sbjct: 156 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 215
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ + +D W++G MF + FR F G ++ DQ+ KI
Sbjct: 216 ELLVDLQDYDYSLDMWSLGC-MFAGMIFRKEPFFYGHDNHDQLVKI 260
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 8/171 (4%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLL--KLMKESAGQNFSEDEARNLCFQV 61
L K HP +V L + + ++ V DY+ L L +E F E AR ++
Sbjct: 92 LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC---FLEPRARFYAAEI 148
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAP 119
L Y+H +RDLKP N+L+ S+G I + D G+ KE I+ + + + T Y AP
Sbjct: 149 ASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAP 208
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVAL 170
EV L + VD W +GA+++EML F +N+A+ I + + L
Sbjct: 209 EV-LHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL 258
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLAGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 144
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 205 EKSACKSS-DLWALGCIIYQLVA 226
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 93 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 150
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 151 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 211 EKSAC-KSSDLWALGCIIYQLVA 232
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI++L +V + + V IV +YME+ L F+ + + + G+ Y+
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
GY HRDL N+L++ ++ K+ D G+ + ++ P Y T RW +PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDD-PEAAYTTRGGKIPIRW-TSPEA 221
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +++E++S+
Sbjct: 222 IAYRKFTSAS-DVWSYGIVLWEVMSY 246
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 96/206 (46%), Gaps = 23/206 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLL--KLMKESAGQNFSEDEARNLCFQVFQGLH 66
+H N+++L + + D+ +V +Y++ L +++ ES N +E + Q+ +G+
Sbjct: 144 DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDES--YNLTELDTILFMKQICEGIR 201
Query: 67 YMHRQGYFHRDLKPSNLL-VSKGV--IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
+MH+ H DLKP N+L V++ IKI D G+ + T + APEV+
Sbjct: 202 HMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVN 261
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG-RW--------------V 168
+ P D W++G I + +LS F G N A+ + I RW
Sbjct: 262 YDFVSFP-TDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAK 320
Query: 169 ALISWLCSWNPRMRPTAAEALEHPFF 194
IS L R +A+EAL+HP+
Sbjct: 321 EFISKLLIKEKSWRISASEALKHPWL 346
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVF--IVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L+ + PNIVKL ++V++ ++F+Y+ + K++ + ++ + R +++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYEL 134
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGV--IKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H QG HRD+KP N+++ + +++ D G+ + V +R+++ P
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ + +D W++G MF + FR F G ++ DQ+ KI
Sbjct: 195 ELLVDLQDYDYSLDMWSLGC-MFAGMIFRKEPFFYGHDNHDQLVKI 239
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NL++ +G IK+ D G+ K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 208 EKSAC-KSSDLWALGCIIYQLVA 229
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI++L +V + + V IV +YME+ L F+ + + + G+ Y+
Sbjct: 92 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 151
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
GY HRDL N+L++ ++ K+ D G+ + ++ P Y T RW +PE
Sbjct: 152 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-PEAAYTTRGGKIPIRW-TSPEA 209
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +++E++S+
Sbjct: 210 IAYRKFTSAS-DVWSYGIVLWEVMSY 234
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVF--IVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L+ + PNIVKL ++V++ ++F+Y+ + K++ + ++ + R +++
Sbjct: 80 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYEL 135
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGV--IKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H QG HRD+KP N+++ + +++ D G+ + V +R+++ P
Sbjct: 136 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 195
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ + +D W++G MF + FR F G ++ DQ+ KI
Sbjct: 196 ELLVDLQDYDYSLDMWSLGC-MFAGMIFRKEPFFYGHDNHDQLVKI 240
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/229 (22%), Positives = 101/229 (44%), Gaps = 21/229 (9%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + + N +PNIV + +++++V +Y+ L ++ E+ E + +C +
Sbjct: 69 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRE 125
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEID-SSLPCTDYVTTRWYRA 118
Q L ++H HRD+K N+L+ G +K+ D G +I + V T ++ A
Sbjct: 126 CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMA 185
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIY--------------KIY 164
PEV + + GP+VD W++G + EM+ + +N +Y K+
Sbjct: 186 PEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLS 244
Query: 165 GRWVALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEA 213
+ ++ + R +A E ++H F + + PL+ EA
Sbjct: 245 AIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTPLIAAAKEA 293
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 145
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 206 EKSACKSS-DLWALGCIIYQLVA 227
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVF--IVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L+ + PNIVKL ++V++ ++F+Y+ + K++ + ++ + R +++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYEL 134
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGV--IKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H QG HRD+KP N+++ + +++ D G+ + V +R+++ P
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ + +D W++G MF + FR F G ++ DQ+ KI
Sbjct: 195 ELLVDLQDYDYSLDMWSLGC-MFAGMIFRKEPFFYGHDNHDQLVKI 239
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 91 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 148
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 149 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 209 EKSAC-KSSDLWALGCIIYQLVA 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 145
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 206 EKSAC-KSSDLWALGCIIYQLVA 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 208 EKSAC-KSSDLWALGCIIYQLVA 229
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI++L +V + + V IV +YME+ L F+ + + + G+ Y+
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
GY HRDL N+L++ ++ K+ D G+ + ++ P Y T RW +PE
Sbjct: 135 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-PEAAYTTRGGKIPIRW-TSPEA 192
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +++E++S+
Sbjct: 193 IAYRKFTSAS-DVWSYGIVLWEVMSY 217
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 85/205 (41%), Gaps = 21/205 (10%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
HPNIV+ + ++ + IV +Y L +AG+ FSEDEAR Q+ G+ Y H
Sbjct: 73 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYCH 131
Query: 70 RQGYFHRDLKPSNLLVSKG---VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
HRDLK N L+ +KI D G K V T Y APEVLL E
Sbjct: 132 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 191
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPG----KNSADQIYKIYGRWVA------------- 169
G D W+ G ++ ML F KN I++I A
Sbjct: 192 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 251
Query: 170 LISWLCSWNPRMRPTAAEALEHPFF 194
LIS + +P R + E H +F
Sbjct: 252 LISRIFVADPAKRISIPEIRNHEWF 276
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 208 EKSACKSS-DLWALGCIIYQLVA 229
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 145
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 206 EKSACKSS-DLWALGCIIYQLVA 227
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVF--IVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L+ + PNIVKL ++V++ ++F+Y+ + K++ + ++ + R +++
Sbjct: 79 LQNLXGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYEL 134
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGV--IKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H QG HRD+KP N+++ + +++ D G+ + V +R+++ P
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ + +D W++G MF + FR F G ++ DQ+ KI
Sbjct: 195 ELLVDLQDYDYSLDMWSLGC-MFAGMIFRKEPFFYGHDNHDQLVKI 239
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 88 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 145
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 146 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 206 EKSACKSS-DLWALGCIIYQLVA 227
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
L+ HPNIVKL + + F+V + + +L + +K+ ++FSE EA + ++
Sbjct: 59 LKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLV 116
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKG----VIKIGDLGMVK-EIDSSLPCTDYVTTRWYR 117
+ +MH G HRDLKP NLL + IKI D G + + + P T Y
Sbjct: 117 SAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYA 176
Query: 118 APEVL---LLSEICGPEVDRWAMGAIMFEMLSFRILF 151
APE+L E C D W++G I++ MLS ++ F
Sbjct: 177 APELLNQNGYDESC----DLWSLGVILYTMLSGQVPF 209
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 85/205 (41%), Gaps = 21/205 (10%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
HPNIV+ + ++ + IV +Y L +AG+ FSEDEAR Q+ G+ Y H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYCH 132
Query: 70 RQGYFHRDLKPSNLLVSKGV---IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
HRDLK N L+ +KI D G K V T Y APEVLL E
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPG----KNSADQIYKIYGRWVA------------- 169
G D W+ G ++ ML F KN I++I A
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 170 LISWLCSWNPRMRPTAAEALEHPFF 194
LIS + +P R + E H +F
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 208 EKSAC-KSSDLWALGCIIYQLVA 229
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLXGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 65 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 122
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 123 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 183 EKSACKSS-DLWALGCIIYQLVA 204
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 87 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 144
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 145 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 205 EKSACKSS-DLWALGCIIYQLVA 226
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 68 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 125
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 126 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 186 EKSACKSS-DLWALGCIIYQLVA 207
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 86/208 (41%), Gaps = 19/208 (9%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HP ++ L + ++ ++ ++ +++ L + SE E N Q +GL +M
Sbjct: 106 HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHM 165
Query: 69 HRQGYFHRDLKPSNLLVS---KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLS 125
H H D+KP N++ +KI D G+ +++ T + APE+ +
Sbjct: 166 HEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEI-VDR 224
Query: 126 EICGPEVDRWAMGAIMFEMLSFRILFPGKN---------------SADQIYKIYGRWVAL 170
E G D WA+G + + +LS F G++ D +
Sbjct: 225 EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDF 284
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRSCH 198
I L PR R T +ALEHP+ + H
Sbjct: 285 IKNLLQKEPRKRLTVHDALEHPWLKGDH 312
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 67 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 124
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 125 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 185 EKSACKSS-DLWALGCIIYQLVA 206
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 72 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 129
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 130 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 190 EKSACKSS-DLWALGCIIYQLVA 211
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 66 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 123
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 124 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 184 EKSACKSS-DLWALGCIIYQLVA 205
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 23/210 (10%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQN-FSEDEARNLCFQVFQGLHYM 68
H +I +L ++++ +F+V +Y +L Q+ SE+E R + Q+ + Y+
Sbjct: 67 HQHICQLYHVLETANKIFMVLEYCPGG--ELFDYIISQDRLSEEETRVVFRQIVSAVAYV 124
Query: 69 HRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDY-----VTTRWYRAPEVL 122
H QGY HRDLKP NLL + +K+ D G+ + + DY + Y APE++
Sbjct: 125 HSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGN---KDYHLQTCCGSLAYAAPELI 181
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI------YGRWVA-----LI 171
G E D W+MG +++ ++ + F N KI +W++ L+
Sbjct: 182 QGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPKWLSPSSILLL 241
Query: 172 SWLCSWNPRMRPTAAEALEHPFFRSCHFVP 201
+ +P+ R + L HP+ + P
Sbjct: 242 QQMLQVDPKKRISMKNLLNHPWIMQDYNYP 271
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI++L +V + + V IV +YME+ L F+ + + + G+ Y+
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
GY HRDL N+L++ ++ K+ D G+ + ++ P Y T RW +PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-PEAAYTTRGGKIPIRW-TSPEA 221
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +++E++S+
Sbjct: 222 IAYRKFTSAS-DVWSYGIVLWEVMSY 246
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWTLCGTPEYLAPEI-ILSKG 215
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 253
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 95 DHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 152
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE+L
Sbjct: 153 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
C D WA+G I++++++
Sbjct: 213 EKSAC-KSSDLWALGCIIYQLVA 234
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 178
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 235
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 273
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI++L +V + + V IV +YME+ L F+ + + + G+ Y+
Sbjct: 102 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 161
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
GY HRDL N+L++ ++ K+ D G+ + ++ P Y T RW +PE
Sbjct: 162 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-PEAAYTTRGGKIPIRW-TSPEA 219
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +++E++S+
Sbjct: 220 IAYRKFTSAS-DVWSYGIVLWEVMSY 244
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI++L +V + + V IV +YME+ L F+ + + + G+ Y+
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
GY HRDL N+L++ ++ K+ D G+ + ++ P Y T RW +PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-PEAAYTTRGGKIPIRW-TSPEA 221
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +++E++S+
Sbjct: 222 IAYRKFTSAS-DVWSYGIVLWEVMSY 246
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI++L +V + + V IV +YME+ L F+ + + + G+ Y+
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
GY HRDL N+L++ ++ K+ D G+ + ++ P Y T RW +PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-PEAAYTTRGGKIPIRW-TSPEA 221
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +++E++S+
Sbjct: 222 IAYRKFTSAS-DVWSYGIVLWEVMSY 246
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 85 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 143
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 144 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWTLCGTPEYLAPEI-ILSKG 200
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 201 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 238
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 86 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 144
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 145 HSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 201
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 202 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 239
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI++L +V + + V IV +YME+ L F+ + + + G+ Y+
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
GY HRDL N+L++ ++ K+ D G+ + ++ P Y T RW +PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-PEAAYTTRGGKIPIRW-TSPEA 221
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +++E++S+
Sbjct: 222 IAYRKFTSAS-DVWSYGIVLWEVMSY 246
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 215
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 253
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 150
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 207
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 245
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 44/211 (20%)
Query: 26 VFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLL 84
+ I+ + ME +L ++E Q F+E EA + + + ++H HRD+KP NLL
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 141
Query: 85 VSK----GVIKIGDLGMVKEIDSS---LPCTDYVTTRWYRAPEVLLLSEICGPE-----V 132
+ V+K+ D G KE + PC T +Y APEVL GPE
Sbjct: 142 YTSKEKDAVLKLTDFGFAKETTQNALQTPC----YTPYYVAPEVL------GPEKYDKSC 191
Query: 133 DRWAMGAIMFEML---------SFRILFPGKNSADQIYKIYG----RWVA-------LIS 172
D W++G IM+ +L + + + PG ++ + YG W LI
Sbjct: 192 DMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ-YGFPNPEWSEVSEDAKQLIR 250
Query: 173 WLCSWNPRMRPTAAEALEHPFFRSCHFVPRS 203
L +P R T + + HP+ VP++
Sbjct: 251 LLLKTDPTERLTITQFMNHPWINQSMVVPQT 281
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 44/211 (20%)
Query: 26 VFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLL 84
+ I+ + ME +L ++E Q F+E EA + + + ++H HRD+KP NLL
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160
Query: 85 VSK----GVIKIGDLGMVKEIDSS---LPCTDYVTTRWYRAPEVLLLSEICGPE-----V 132
+ V+K+ D G KE + PC T +Y APEVL GPE
Sbjct: 161 YTSKEKDAVLKLTDFGFAKETTQNALQTPC----YTPYYVAPEVL------GPEKYDKSC 210
Query: 133 DRWAMGAIMFEML---------SFRILFPGKNSADQIYKIYG----RWVA-------LIS 172
D W++G IM+ +L + + + PG ++ + YG W LI
Sbjct: 211 DMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ-YGFPNPEWSEVSEDAKQLIR 269
Query: 173 WLCSWNPRMRPTAAEALEHPFFRSCHFVPRS 203
L +P R T + + HP+ VP++
Sbjct: 270 LLLKTDPTERLTITQFMNHPWINQSMVVPQT 300
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 215
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 253
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 11 PNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHR 70
P + +L + + + ++ V +Y+ L + G+ F E A ++ GL ++
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQS 460
Query: 71 QGYFHRDLKPSNLLV-SKGVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLLSEIC 128
+G +RDLK N+++ S+G IKI D GM KE I + + T Y APE++
Sbjct: 461 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY- 519
Query: 129 GPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYK------------IYGRWVALISWLCS 176
G VD WA G +++EML+ + F G++ D++++ + VA+ L +
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSIMEHNVAYPKSMSKEAVAICKGLMT 578
Query: 177 WNPRMR----PTAAEAL-EHPFFR 195
+P R P + EH FFR
Sbjct: 579 KHPGKRLGCGPEGERDIKEHAFFR 602
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NL++ +G IK+ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y + G+ FSE AR Q+ Y+
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NL++ +G IK+ D G K + T Y APE+ +LS+
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 215
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 253
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 215
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 253
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 215
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 253
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 215
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 253
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 85/159 (53%), Gaps = 11/159 (6%)
Query: 11 PNIVKLRNLVKEHEDVF--IVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
PNIVKL ++V++ ++F+Y+ + K++ + ++ + R +++ + L Y
Sbjct: 87 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 142
Query: 69 HRQGYFHRDLKPSNLLVSKGV--IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
H QG HRD+KP N+++ + +++ D G+ + V +R+++ PE+L+ +
Sbjct: 143 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 202
Query: 127 ICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
+D W++G MF + FR F G ++ DQ+ KI
Sbjct: 203 DYDYSLDMWSLGC-MFAGMIFRKEPFFYGHDNHDQLVKI 240
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVF--IVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L+ + PNIVKL ++V++ ++F+Y+ + K++ + ++ + R +++
Sbjct: 79 LQNLMGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYEL 134
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGV--IKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H QG HRD+KP N+++ + +++ D G+ + V +R+++ P
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ + +D W++G MF + FR F G ++ DQ+ KI
Sbjct: 195 ELLVDLQDYDYSLDMWSLGC-MFAGMIFRKEPFFYGHDNHDQLVKI 239
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 85/159 (53%), Gaps = 11/159 (6%)
Query: 11 PNIVKLRNLVKEHEDVF--IVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
PNIVKL ++V++ ++F+Y+ + K++ + ++ + R +++ + L Y
Sbjct: 86 PNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYELLKALDYC 141
Query: 69 HRQGYFHRDLKPSNLLVSKGV--IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
H QG HRD+KP N+++ + +++ D G+ + V +R+++ PE+L+ +
Sbjct: 142 HSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQ 201
Query: 127 ICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
+D W++G MF + FR F G ++ DQ+ KI
Sbjct: 202 DYDYSLDMWSLGC-MFAGMIFRKEPFFYGHDNHDQLVKI 239
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVF--IVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L+ + PNIVKL ++V++ ++F+Y+ + K++ + ++ + R +++
Sbjct: 79 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYEL 134
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGV--IKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H QG HRD+KP N+++ + +++ D G+ + V +R+++ P
Sbjct: 135 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 194
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ + +D W++G MF + FR F G ++ DQ+ KI
Sbjct: 195 ELLVDLQDYDYSLDMWSLGC-MFAGMIFRKEPFFYGHDNHDQLVKI 239
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 88/166 (53%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVF--IVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L+ + PNIVKL ++V++ ++F+Y+ + K++ + ++ + R +++
Sbjct: 81 LQNLCGGPNIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPT----LTDYDIRYYIYEL 136
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGV--IKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H QG HRD+KP N+++ + +++ D G+ + V +R+++ P
Sbjct: 137 LKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGP 196
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ + +D W++G MF + FR F G ++ DQ+ KI
Sbjct: 197 ELLVDLQDYDYSLDMWSLGC-MFAGMIFRKEPFFYGHDNHDQLVKI 241
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 85/205 (41%), Gaps = 21/205 (10%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
HPNIV+ + ++ + IV +Y L +AG+ FSEDEAR Q+ G+ Y H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYCH 132
Query: 70 RQGYFHRDLKPSNLLVSKGV---IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
HRDLK N L+ +KI G K D V T Y APEVLL E
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKE 192
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPG----KNSADQIYKIYGRWVA------------- 169
G D W+ G ++ ML F KN I++I A
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 170 LISWLCSWNPRMRPTAAEALEHPFF 194
LIS + +P R + E H +F
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI++L +V + + V IV +YME+ L F+ + + + G+ Y+
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
GY HRDL N+L++ ++ K+ D G+ + ++ P Y T RW +PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD-PEAAYTTRGGKIPIRW-TSPEA 221
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +++E++S+
Sbjct: 222 IAYRKFTSAS-DVWSYGIVLWEVMSY 246
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 148
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 207
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNS--ADQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHL 267
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 268 IRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 148
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 207
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNS--ADQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHL 267
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 268 IRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 110/244 (45%), Gaps = 57/244 (23%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + NI+KL + VK+ + +VF+Y+ + K + Q ++ + R +++
Sbjct: 86 LENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLY----QILTDFDIRFYMYEL 141
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H +G HRD+KP N+++ + +++ D G+ + + V +R+++ P
Sbjct: 142 LKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGP 201
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI-LFPGKNSADQIYKI---------YG---- 165
E+L+ ++ +D W++G ++ M+ R F G+++ DQ+ +I YG
Sbjct: 202 ELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKK 261
Query: 166 -------------------RW----------------VALISWLCSWNPRMRPTAAEALE 190
RW + L+ L ++ + R TA EA+E
Sbjct: 262 YHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAME 321
Query: 191 HPFF 194
HP+F
Sbjct: 322 HPYF 325
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI++L +V IV +YME+ L + F+ + + V G+ Y+
Sbjct: 108 DHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL 167
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTT------RWYRAPEV 121
GY HRDL N+LV ++ K+ D G+ + ++ P TT RW APE
Sbjct: 168 SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD-PDAAXTTTGGKIPIRWT-APEA 225
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ D W+ G +M+E+L++
Sbjct: 226 IAFRTFSSAS-DVWSFGVVMWEVLAY 250
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 147
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 206
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNS--ADQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHL 266
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 267 IRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 147
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 206
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNS--ADQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHL 266
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 267 IRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 79/147 (53%), Gaps = 12/147 (8%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLL-KLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+H NI++L ++ +++ + I+ +YME+ L K ++E G+ FS + + + G+ Y
Sbjct: 104 SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGE-FSVLQLVGMLRGIAAGMKY 162
Query: 68 MHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTT------RWYRAPE 120
+ Y HRDL N+LV+ ++ K+ D G+ + ++ P Y T+ RW APE
Sbjct: 163 LANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD-PEATYTTSGGKIPIRW-TAPE 220
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +M+E++++
Sbjct: 221 AISYRKFTSAS-DVWSFGIVMWEVMTY 246
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NL++ +G I++ D G+ K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 110/244 (45%), Gaps = 57/244 (23%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + NI+KL + VK+ + +VF+Y+ + K + Q ++ + R +++
Sbjct: 91 LENLRGGTNIIKLIDTVKDPVSKTPALVFEYINNTDFKQLY----QILTDFDIRFYMYEL 146
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H +G HRD+KP N+++ + +++ D G+ + + V +R+++ P
Sbjct: 147 LKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGP 206
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI-LFPGKNSADQIYKI---------YG---- 165
E+L+ ++ +D W++G ++ M+ R F G+++ DQ+ +I YG
Sbjct: 207 ELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKK 266
Query: 166 -------------------RW----------------VALISWLCSWNPRMRPTAAEALE 190
RW + L+ L ++ + R TA EA+E
Sbjct: 267 YHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYDHQQRLTAKEAME 326
Query: 191 HPFF 194
HP+F
Sbjct: 327 HPYF 330
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 22/204 (10%)
Query: 11 PNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHR 70
P + +L + + + ++ V +Y+ L + G+ F E A ++ GL ++
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR-FKEPHAVFYAAEIAIGLFFLQS 139
Query: 71 QGYFHRDLKPSNLLV-SKGVIKIGDLGMVKE-IDSSLPCTDYVTTRWYRAPEVLLLSEIC 128
+G +RDLK N+++ S+G IKI D GM KE I + + T Y APE++
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPY- 198
Query: 129 GPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYK------------IYGRWVALISWLCS 176
G VD WA G +++EML+ + F G++ D++++ + VA+ L +
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSIMEHNVAYPKSMSKEAVAICKGLMT 257
Query: 177 WNPRMR----PTAAEAL-EHPFFR 195
+P R P + EH FFR
Sbjct: 258 KHPGKRLGCGPEGERDIKEHAFFR 281
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 1 MIFLRKMNN-HPNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 58 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 115
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 116 FWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 174
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA-----L 170
Y PE + G W++G ++++M+ I F + + + V+ L
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 234
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRSC 197
I W + P RPT E HP+ +
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 20/149 (13%)
Query: 11 PNIVKL----RNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
P+IV++ NL + + IV + ++ +L +++ Q F+E EA + + + +
Sbjct: 115 PHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAI 174
Query: 66 HYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
Y+H HRD+KP NLL + ++K+ D G KE S T T +Y APEV
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEV 234
Query: 122 LLLSEICGPE-----VDRWAMGAIMFEML 145
L GPE D W++G I + +L
Sbjct: 235 L------GPEKYDKSCDXWSLGVIXYILL 257
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 1 MIFLRKMNN-HPNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 58 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 115
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 116 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 174
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNS--ADQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSSECQHL 234
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRSC 197
I W + P RPT E HP+ +
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 21/191 (10%)
Query: 25 DVFIVFDYMESDLLKLMKE--SAGQNFSEDEARNLCFQVFQGLHYMHRQ-GYFHRDLKPS 81
DV+I + M++ L K K+ GQ ED + + + L ++H + HRD+KPS
Sbjct: 124 DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPS 183
Query: 82 NLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVL---LLSEICGPEVDRWAM 137
N+L++ G +K+ D G+ + S+ T + Y APE + L + + D W++
Sbjct: 184 NVLINALGQVKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSL 243
Query: 138 GAIMFEMLSFRILFPGKNSADQ--------------IYKIYGRWVALISWLCSWNPRMRP 183
G M E+ R + + Q K +V S N + RP
Sbjct: 244 GITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERP 303
Query: 184 TAAEALEHPFF 194
T E ++HPFF
Sbjct: 304 TYPELMQHPFF 314
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 148
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 207
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNS--ADQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHL 267
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 268 IRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLS 146
VD WA+G +++EM +
Sbjct: 215 YNKAVDWWALGVLIYEMAA 233
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 6/157 (3%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQN--FSEDEARNLC 58
I L K NHPN++K E ++ IV + ++ DL +++K Q E
Sbjct: 83 IDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYF 142
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDS-SLPCTDYVTTRWY 116
Q+ L +MH + HRD+KP+N+ ++ GV+K+GDLG+ + S + V T +Y
Sbjct: 143 VQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYY 202
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPG 153
+PE + + + D W++G +++EM + + F G
Sbjct: 203 MSPERIHENGY-NFKSDIWSLGCLLYEMAALQSPFYG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 91 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 148
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 207
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNS--ADQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHL 267
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 268 IRWCLALRPSDRPTFEEIQNHPWMQD 293
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 147
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 206
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNS--ADQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIGGQVFFRQRVSXECQHL 266
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 267 IRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ F+E AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FAEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESD-LLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ LLK +++ +F E R ++ L Y
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE LL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE-LL 206
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
+ D WA+G I++++++
Sbjct: 207 TEKSASKSSDLWALGCIIYQLVA 229
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 97 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 154
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 213
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA--DQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 273
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 274 IRWCLALRPSDRPTFEEIQNHPWMQD 299
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNN-HPNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 105 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 162
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 221
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA--DQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 281
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 282 IRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 77 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 134
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 193
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA--DQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 253
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 254 IRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 135
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 194
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA--DQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 254
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 255 IRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G ++++M + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYQMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI+ L +V + + V I+ +YME+ L F+ + + + G+ Y+
Sbjct: 67 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
Y HRDL N+LV+ ++ K+ D GM + ++ P Y T RW APE
Sbjct: 127 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD-PEAAYTTRGGKIPIRW-TAPEA 184
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +M+E++S+
Sbjct: 185 IAYRKFTSAS-DVWSYGIVMWEVMSY 209
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 105 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 162
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 221
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA--DQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 281
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 282 IRWCLALRPSDRPTFEEIQNHPWMQD 307
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 23/230 (10%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + + N +PNIV + +++++V +Y+ L ++ E+ E + +C +
Sbjct: 69 ILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRE 125
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI--DSSLPCTDYVTTRWYR 117
Q L ++H HR++K N+L+ G +K+ D G +I + S T V T ++
Sbjct: 126 CLQALEFLHSNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRST-MVGTPYWM 184
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIY--------------KI 163
APEV + + GP+VD W++G + EM+ + +N +Y K+
Sbjct: 185 APEV-VTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKL 243
Query: 164 YGRWVALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEA 213
+ ++ + R +A E ++H F + + PL+ EA
Sbjct: 244 SAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTPLIAAAKEA 293
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 75/143 (52%), Gaps = 8/143 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HP VKL ++ E ++ Y ++ +LLK +++ +F E R ++ L Y
Sbjct: 90 DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEY 147
Query: 68 MHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+H +G HRDLKP N+L+++ + I+I D G K + +V T Y +PE LL
Sbjct: 148 LHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE-LL 206
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
+ D WA+G I++++++
Sbjct: 207 TEKSAXKSSDLWALGCIIYQLVA 229
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G+ Y+
Sbjct: 321 HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 379
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YRAPEV 121
R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +Y + + APE
Sbjct: 380 ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFPIKWTAPEA 435
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 436 ALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 481
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 90 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 147
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 206
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA--DQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 266
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 267 IRWCLALRPSDRPTFEEIQNHPWMQD 292
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI+ L +V + + V I+ +YME+ L F+ + + + G+ Y+
Sbjct: 73 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 132
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
Y HRDL N+LV+ ++ K+ D GM + ++ P Y T RW APE
Sbjct: 133 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD-PEAAYTTRGGKIPIRW-TAPEA 190
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +M+E++S+
Sbjct: 191 IAYRKFTSAS-DVWSYGIVMWEVMSY 215
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ F E AR Q+ Y+
Sbjct: 120 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FXEPHARFYAAQIVLTFEYL 178
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 179 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 235
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 236 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 273
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 1 MIFLRKMNN-HPNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 105 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 162
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 221
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA-----L 170
Y PE + G W++G ++++M+ I F + + + V+ L
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 281
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRSC 197
I W + P RPT E HP+ +
Sbjct: 282 IRWCLALRPSDRPTFEEIQNHPWMQDV 308
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKE--SAGQNFS----EDEARNLCFQV 61
+HPNIV +++++V + +L ++K + G++ S E + +V
Sbjct: 71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCT------DYVTTR 114
+GL Y+H+ G HRD+K N+L+ + G ++I D G+ + + T +V T
Sbjct: 131 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 190
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFE-----------------MLSFRILFPGKNSA 157
+ APEV+ + D W+ G E ML+ + P +
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 250
Query: 158 DQ---IYKIYGR-WVALISWLCSWNPRMRPTAAEALEHPFFRSC 197
Q + K YG+ + +IS +P RPTAAE L H FF+
Sbjct: 251 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ F E AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 1 MIFLRKMNN-HPNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 120
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 179
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA--DQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 239
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRSC 197
I W + P RPT E HP+ +
Sbjct: 240 IRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 77 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 134
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 193
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA-----L 170
Y PE + G W++G ++++M+ I F + + + V+ L
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 253
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 254 IRWCLALRPSDRPTFEEIQNHPWMQD 279
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NL++ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 95/224 (42%), Gaps = 35/224 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQN------FSEDEARNLCFQV 61
+HPNIV +++++V + +L ++K + E + +V
Sbjct: 66 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 125
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCT------DYVTTR 114
+GL Y+H+ G HRD+K N+L+ + G ++I D G+ + + T +V T
Sbjct: 126 LEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTP 185
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFE-----------------MLSFRILFPGKNSA 157
+ APEV+ + D W+ G E ML+ + P +
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 245
Query: 158 DQ---IYKIYGR-WVALISWLCSWNPRMRPTAAEALEHPFFRSC 197
Q + K YG+ + +IS +P RPTAAE L H FF+
Sbjct: 246 VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI++L +V + + V IV +YME+ L F+ + + + G+ Y+
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
G+ HRDL N+L++ ++ K+ D G+ + ++ P Y T RW +PE
Sbjct: 164 SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-PEAAYTTRGGKIPIRW-TSPEA 221
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +++E++S+
Sbjct: 222 IAYRKFTSAS-DVWSYGIVLWEVMSY 246
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 1 MIFLRKMNN-HPNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 120
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 179
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA--DQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 239
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRSC 197
I W + P RPT E HP+ +
Sbjct: 240 IRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 110 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 167
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 226
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA-----L 170
Y PE + G W++G ++++M+ I F + + + V+ L
Sbjct: 227 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 286
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 287 IRWCLALRPSDRPTFEEIQNHPWMQD 312
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P + KL K++ ++++V +Y + G+ FSE AR Q+ Y+
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NL++ +G IK+ D G K + T Y APE+ +LS+
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 215
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 253
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 18/171 (10%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G
Sbjct: 68 KKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YR 117
+ Y+ R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +Y + +
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFPIKWT 182
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
APE L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 183 APEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 135
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 194
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA-----L 170
Y PE + G W++G ++++M+ I F + + + V+ L
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 254
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 255 IRWCLALRPSDRPTFEEIQNHPWMQD 280
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NL++ +G I++ D G K + T Y APE+ ++S+
Sbjct: 158 HSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-IISKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P + KL K++ ++++V +Y + G+ FSE AR Q+ Y+
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 158
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NL++ +G IK+ D G K + T Y APE+ +LS+
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 215
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 253
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 1 MIFLRKMNN-HPNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 62 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 119
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 178
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA--DQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 238
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRSC 197
I W + P RPT E HP+ +
Sbjct: 239 IRWCLALRPSDRPTFEEIQNHPWMQDV 265
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 13/206 (6%)
Query: 1 MIFLRKMNNH-PNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 78 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 135
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 194
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA-----L 170
Y PE + G W++G ++++M+ I F + + + V+ L
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 254
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I W + P RPT E HP+ +
Sbjct: 255 IRWCLALRPXDRPTFEEIQNHPWMQD 280
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ F E AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 32/197 (16%)
Query: 10 HPNIVKLRNLVKEHED------VFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQ 63
HP+IV++ N V EH D +IV +Y+ + +K S GQ EA ++
Sbjct: 138 HPSIVQIFNFV-EHTDRHGDPVGYIVMEYVGG---QSLKRSKGQKLPVAEAIAYLLEILP 193
Query: 64 GLHYMHRQGYFHRDLKPSNLLVSKGVIKIGDLGMVKEIDSSLPCTDYV-TTRWYRAPEVL 122
L Y+H G + DLKP N+++++ +K+ DLG V I+S Y+ T ++APE++
Sbjct: 194 ALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINS----FGYLYGTPGFQAPEIV 249
Query: 123 LLSEICGPEV--DRWAMGAIMFEMLSFRILFPGKNS--------ADQIYKIYGRWVALIS 172
GP V D + +G + + + P +N D + K Y + L+
Sbjct: 250 R----TGPTVATDIYTVGRT---LAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLLR 302
Query: 173 WLCSWNPRMRPTAAEAL 189
+PR R T AE +
Sbjct: 303 RAIDPDPRQRFTTAEEM 319
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G+ Y+
Sbjct: 238 HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YRAPEV 121
R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +Y + + APE
Sbjct: 297 ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFPIKWTAPEA 352
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 353 ALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 398
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 1 MIFLRKMNN-HPNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 61 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 118
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 119 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 177
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA--DQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 237
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRSC 197
I W + P RPT E HP+ +
Sbjct: 238 IRWCLALRPSDRPTFEEIQNHPWMQDV 264
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G+ Y+
Sbjct: 238 HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YRAPEV 121
R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +Y + + APE
Sbjct: 297 ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFPIKWTAPEA 352
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 353 ALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 398
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 116/262 (44%), Gaps = 33/262 (12%)
Query: 13 IVKLRNLVKEHEDVFIVFDY-MESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQ 71
I +L ++ +++V +Y + DLL L+ + G+ + AR ++ + +HR
Sbjct: 123 ITQLHFAFQDENYLYLVMEYYVGGDLLTLLSK-FGERIPAEMARFYLAEIVMAIDSVHRL 181
Query: 72 GYFHRDLKPSNLLVSK-GVIKIGDLGMVKEI--DSSLPCTDYVTTRWYRAPEVL------ 122
GY HRD+KP N+L+ + G I++ D G ++ D ++ V T Y +PE+L
Sbjct: 182 GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGG 241
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI--YGRWVAL---------- 170
+ GPE D WA+G +EM + F ++A+ KI Y ++L
Sbjct: 242 PGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEE 301
Query: 171 -----ISWLCSWNPRM-RPTAAEALEHPFFRSCHF--VPRSVPLLCNNFEAVAFPTATVT 222
LC R+ R A + HPFF + + SVP +FE A T
Sbjct: 302 ARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVPPFTPDFEG-ATDTCNFD 360
Query: 223 MQGRSLTYSQVPNDGQLCSCVK 244
+ LT + V G+ S ++
Sbjct: 361 LVEDGLT-AMVSGGGETLSDIR 381
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 1 MIFLRKMNN-HPNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 63 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 120
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 179
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA--DQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 239
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRSC 197
I W + P RPT E HP+ +
Sbjct: 240 IRWCLALRPSDRPTFEEIQNHPWMQDV 266
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 1 MIFLRKMNN-HPNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 58 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 115
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 116 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 174
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA--DQIY---KIYGRWVAL 170
Y PE + G W++G ++++M+ I F Q++ ++ L
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHL 234
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRSC 197
I W + P RPT E HP+ +
Sbjct: 235 IRWCLALRPSDRPTFEEIQNHPWMQDV 261
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ F E AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ F E AR Q+ Y+
Sbjct: 92 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FXEPHARFYAAQIVLTFEYL 150
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 151 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 207
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 208 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 245
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 18/171 (10%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G
Sbjct: 61 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 119
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YR 117
+ Y+ R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +Y + +
Sbjct: 120 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFPIKWT 175
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
APE L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 176 APEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 225
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ F E AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ F E AR Q+ Y+
Sbjct: 94 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FXEPHARFYAAQIVLTFEYL 152
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 153 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 209
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 210 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 247
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 12/168 (7%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G
Sbjct: 68 KKLRHEKLVQLYAVVSE-EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTT---RWYRAPE 120
+ Y+ R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +W APE
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW-TAPE 185
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 186 AALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ F E AR Q+ Y+
Sbjct: 100 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FXEPHARFYAAQIVLTFEYL 158
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 159 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 215
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 253
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ F E AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y + G+ F E AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FXEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NL++ +G IK+ D G K + T Y APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G+ Y+
Sbjct: 238 HEKLVQLYAVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 296
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YRAPEV 121
R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +Y + + APE
Sbjct: 297 ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFPIKWTAPEA 352
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 353 ALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 398
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 90/209 (43%), Gaps = 28/209 (13%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNIVKL + +++I+ ++ + + + +E + + +C Q L+Y+
Sbjct: 92 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 151
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTD-YVTTRWYRAPEVLLLSE 126
H HRDLK N+L + G IK+ D G+ + ++ D ++ T ++ APEV++
Sbjct: 152 HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVM--- 208
Query: 127 ICGPEVDR--------WAMGAIMFEMLSF----------RILFPGKNSADQIYKIYGRWV 168
C DR W++G + EM R+L S RW
Sbjct: 209 -CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWS 267
Query: 169 A----LISWLCSWNPRMRPTAAEALEHPF 193
+ + N R T ++ L+HPF
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G+ Y+
Sbjct: 69 HEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YRAPEV 121
R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +Y + + APE
Sbjct: 128 ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFPIKWTAPEA 183
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 184 ALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 229
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Query: 1 MIFLRKMNN-HPNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNL 57
++ L+K+++ +++L + + + ++ + E DL + E E+ AR+
Sbjct: 85 VVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGA--LQEELARSF 142
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV--SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
+QV + + + H G HRD+K N+L+ ++G +K+ D G + ++ TD+ TR
Sbjct: 143 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV-YTDFDGTRV 201
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA-----L 170
Y PE + G W++G ++++M+ I F + + + V+ L
Sbjct: 202 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSXECQHL 261
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRSC 197
I W + P RPT E HP+ +
Sbjct: 262 IRWCLALRPSDRPTFEEIQNHPWMQDV 288
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T Y AP ++LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEYLAP-AIILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 18/171 (10%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G
Sbjct: 68 KKIRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YR 117
+ Y+ R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +Y + +
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFPIKWT 182
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
APE L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 183 APEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 18/171 (10%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G
Sbjct: 68 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YR 117
+ Y+ R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +Y + +
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFPIKWT 182
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
APE L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 183 APEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 18/171 (10%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G
Sbjct: 57 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 115
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YR 117
+ Y+ R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +Y + +
Sbjct: 116 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFPIKWT 171
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
APE L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 172 APEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 221
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 18/171 (10%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESD-LLKLMKESAGQNFSEDEARNLCFQVFQG 64
K H +V+L +V E E ++IV +YM LL +K G+ + ++ Q+ G
Sbjct: 68 KKLRHEKLVQLYAVVSE-EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YR 117
+ Y+ R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +Y + +
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFPIKWT 182
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
APE L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 183 APEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 18/171 (10%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G
Sbjct: 59 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 117
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YR 117
+ Y+ R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +Y + +
Sbjct: 118 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFPIKWT 173
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
APE L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 174 APEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 223
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI++L +V + + V IV + ME+ L F+ + + + G+ Y+
Sbjct: 75 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 134
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
GY HRDL N+L++ ++ K+ D G+ + ++ P Y T RW +PE
Sbjct: 135 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-PEAAYTTRGGKIPIRW-TSPEA 192
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +++E++S+
Sbjct: 193 IAYRKFTSAS-DVWSYGIVLWEVMSY 217
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 19/201 (9%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY--MESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPNI++L + V+++ +Y + + +L K S F E ++ L Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---RFDEQRTATYITELANALSY 127
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
H + HRD+KP NLL+ S G +KI D G SS T T Y PE ++
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTT-LCGTLDYLPPE-MIEGR 185
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI------YGRWVA-----LISWLC 175
+ +VD W++G + +E L F + +I + +V LIS L
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLL 245
Query: 176 SWNPRMRPTAAEALEHPFFRS 196
N R T AE LEHP+ ++
Sbjct: 246 KHNASQRLTLAEVLEHPWIKA 266
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 86/171 (50%), Gaps = 18/171 (10%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G
Sbjct: 68 KKLRHEKLVQLYAVVSE-EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YR 117
+ Y+ R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +Y + +
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFPIKWT 182
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
APE L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 183 APEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 20/178 (11%)
Query: 26 VFIVFDYMESDLLKL-MKESAGQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNL- 83
+FI ++ + L+ +++ G+ + A L Q+ +G+ Y+H + HRDLKPSN+
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 84 LVSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFE 143
LV +KIGD G+V + + T T Y +PE + S+ G EVD +A+G I+ E
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQ-ISSQDYGKEVDLYALGLILAE 227
Query: 144 MLS-----------FRILFPGKNSADQIYKIYG-RWVALISWLCSWNPRMRPTAAEAL 189
+L F L G I I+ + L+ L S P RP +E L
Sbjct: 228 LLHVCDTAFETSKFFTDLRDG-----IISDIFDKKEKTLLQKLLSKKPEDRPNTSEIL 280
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 12/147 (8%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLL-KLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPNI++L +V V I+ ++ME+ L ++ + GQ F+ + + + G+ Y+
Sbjct: 74 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIASGMRYL 132
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVK--EIDSSLPC-----TDYVTTRWYRAPE 120
Y HRDL N+LV+ ++ K+ D G+ + E +SS P + RW APE
Sbjct: 133 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRW-TAPE 191
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +M+E++SF
Sbjct: 192 AIAFRKFTSAS-DAWSYGIVMWEVMSF 217
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 84/205 (40%), Gaps = 21/205 (10%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
HPNIV+ + ++ + IV +Y L +AG+ FSEDEAR Q+ G+ Y H
Sbjct: 74 HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-FSEDEARFFFQQLISGVSYCH 132
Query: 70 RQGYFHRDLKPSNLLVSKGV---IKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
HRDLK N L+ +KI G K V T Y APEVLL E
Sbjct: 133 AMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKE 192
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPG----KNSADQIYKIYGRWVA------------- 169
G D W+ G ++ ML F KN I++I A
Sbjct: 193 YDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRH 252
Query: 170 LISWLCSWNPRMRPTAAEALEHPFF 194
LIS + +P R + E H +F
Sbjct: 253 LISRIFVADPAKRISIPEIRNHEWF 277
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 16/179 (8%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQ 63
L M HPNI+ LR + + ++ +V ++ L + +G+ D N Q+ +
Sbjct: 59 LFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLN--RVLSGKRIPPDILVNWAVQIAR 116
Query: 64 GLHYMHRQG---YFHRDLKPSNLLV---------SKGVIKIGDLGMVKEIDSSLPCTDYV 111
G++Y+H + HRDLK SN+L+ S ++KI D G+ +E + +
Sbjct: 117 GMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAG 176
Query: 112 TTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVAL 170
W APEV+ S + D W+ G +++E+L+ + F G + Y + +AL
Sbjct: 177 AYAWM-APEVIRAS-MFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLAL 233
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 12/147 (8%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLL-KLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPNI++L +V V I+ ++ME+ L ++ + GQ F+ + + + G+ Y+
Sbjct: 76 HPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIASGMRYL 134
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVK--EIDSSLPCT-----DYVTTRWYRAPE 120
Y HRDL N+LV+ ++ K+ D G+ + E +SS P + RW APE
Sbjct: 135 AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWT-APE 193
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +M+E++SF
Sbjct: 194 AIAFRKFTSAS-DAWSYGIVMWEVMSF 219
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 85/164 (51%), Gaps = 12/164 (7%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G+ Y+
Sbjct: 69 HEKLVQLYAVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYV 127
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW---YRAPEVLLL 124
R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + T ++ + APE L
Sbjct: 128 ERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN-EWTARQGAKFPIKWTAPEAALY 186
Query: 125 SEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
+ D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 187 GRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 229
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI++L +V + + V IV + ME+ L F+ + + + G+ Y+
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
GY HRDL N+L++ ++ K+ D G+ + ++ P Y T RW +PE
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-PEAAYTTRGGKIPIRW-TSPEA 221
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +++E++S+
Sbjct: 222 IAYRKFTSAS-DVWSYGIVLWEVMSY 246
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 18/171 (10%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESD-LLKLMKESAGQNFSEDEARNLCFQVFQG 64
K H +V+L +V E E ++IV +YM LL +K G+ + ++ Q+ G
Sbjct: 68 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YR 117
+ Y+ R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +Y + +
Sbjct: 127 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFPIKWT 182
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
APE L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 183 APEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 28/209 (13%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNIVKL + +++I+ ++ + + + +E + + +C Q L+Y+
Sbjct: 92 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 151
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTD-YVTTRWYRAPEVLLLSE 126
H HRDLK N+L + G IK+ D G+ + + D ++ T ++ APEV++
Sbjct: 152 HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVM--- 208
Query: 127 ICGPEVDR--------WAMGAIMFEMLSF----------RILFPGKNSADQIYKIYGRWV 168
C DR W++G + EM R+L S RW
Sbjct: 209 -CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWS 267
Query: 169 A----LISWLCSWNPRMRPTAAEALEHPF 193
+ + N R T ++ L+HPF
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 89/209 (42%), Gaps = 28/209 (13%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNIVKL + +++I+ ++ + + + +E + + +C Q L+Y+
Sbjct: 92 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 151
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTD-YVTTRWYRAPEVLLLSE 126
H HRDLK N+L + G IK+ D G+ + + D ++ T ++ APEV++
Sbjct: 152 HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVM--- 208
Query: 127 ICGPEVDR--------WAMGAIMFEMLSF----------RILFPGKNSADQIYKIYGRWV 168
C DR W++G + EM R+L S RW
Sbjct: 209 -CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWS 267
Query: 169 A----LISWLCSWNPRMRPTAAEALEHPF 193
+ + N R T ++ L+HPF
Sbjct: 268 SNFKDFLKKCLEKNVDARWTTSQLLQHPF 296
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 29/210 (13%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNIVKL + +++I+ ++ + + + +E + + +C Q L+Y+
Sbjct: 65 DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYL 124
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGM-VKEIDSSLPCTD-YVTTRWYRAPEVLLLS 125
H HRDLK N+L + G IK+ D G+ K + + D ++ T ++ APEV++
Sbjct: 125 HDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVM-- 182
Query: 126 EICGPEVDR--------WAMGAIMFEMLSF----------RILFPGKNSADQIYKIYGRW 167
C DR W++G + EM R+L S RW
Sbjct: 183 --CETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW 240
Query: 168 VA----LISWLCSWNPRMRPTAAEALEHPF 193
+ + N R T ++ L+HPF
Sbjct: 241 SSNFKDFLKKCLEKNVDARWTTSQLLQHPF 270
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 103/228 (45%), Gaps = 46/228 (20%)
Query: 3 FLRKMNNHPNIVKL---RNLVKEHEDV-----FIVFDYMESDLLKLMK--ESAGQNFSED 52
F++K++ HPNIV+ ++ KE D ++ + + L++ +K ES G S D
Sbjct: 78 FMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGP-LSCD 136
Query: 53 EARNLCFQVFQGLHYMHRQG--YFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTD 109
+ +Q + + +MHRQ HRDLK NLL+S +G IK+ D G I S P D
Sbjct: 137 TVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI-SHYP--D 193
Query: 110 YV----------------TTRWYRAPEVLLLSE--ICGPEVDRWAMGAIMFEMLSFRI-- 149
Y TT YR PE++ L G + D WA+G I++ +L FR
Sbjct: 194 YSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY-LLCFRQHP 252
Query: 150 --------LFPGKNSADQIYKIYGRWVALISWLCSWNPRMRPTAAEAL 189
+ GK S Y + +LI + NP R + AE +
Sbjct: 253 FEDGAKLRIVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVV 300
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
N P +V+L ++ +++V +YM DL+ LM + + E AR +V L
Sbjct: 132 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDA 188
Query: 68 MHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSS--LPCTDYVTTRWYRAPEVLLL 124
+H G+ HRD+KP N+L+ K G +K+ D G +++ + C V T Y +PEVL
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 125 ---SEICGPEVDRWAMGAIMFEML 145
G E D W++G ++EML
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEML 272
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 96/213 (45%), Gaps = 27/213 (12%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDY----MESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
+ P++VK ++ D++IV +Y SD+++L ++ +EDE + +G
Sbjct: 82 DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT----LTEDEIATILQSTLKG 137
Query: 65 LHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVT-TRWYRAPEVL 122
L Y+H HRD+K N+L+ ++G K+ D G+ ++ + + V T ++ APEV
Sbjct: 138 LEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEV- 196
Query: 123 LLSEICGPEV-DRWAMGAIMFEMLSFRILFPGKNSADQIYKI--------------YGRW 167
+ EI V D W++G EM + + + I+ I +
Sbjct: 197 -IQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNF 255
Query: 168 VALISWLCSWNPRMRPTAAEALEHPFFRSCHFV 200
+ +P R TA + L+HPF RS V
Sbjct: 256 TDFVKQCLVKSPEQRATATQLLQHPFVRSAKGV 288
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 85/171 (49%), Gaps = 18/171 (10%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G
Sbjct: 68 KKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YR 117
+ Y+ R Y HRDL +N+LV + ++ K+ D G+ + I+ + +Y + +
Sbjct: 127 MAYVERMNYVHRDLAAANILVGENLVCKVADFGLARLIEDN----EYTARQGAKFPIKWT 182
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
APE L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 183 APEAALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 232
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
N P +V+L ++ +++V +YM DL+ LM + + E AR +V L
Sbjct: 127 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDA 183
Query: 68 MHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSS--LPCTDYVTTRWYRAPEVLLL 124
+H G+ HRD+KP N+L+ K G +K+ D G +++ + C V T Y +PEVL
Sbjct: 184 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 243
Query: 125 ---SEICGPEVDRWAMGAIMFEML 145
G E D W++G ++EML
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEML 267
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 84/158 (53%), Gaps = 13/158 (8%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K H +VKL +V + E ++I+ ++M + LL +K G + + Q+ +G
Sbjct: 232 KTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 290
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
+ ++ ++ Y HRDL+ +N+LVS ++ KI D G+ + + + P +W APE +
Sbjct: 291 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR-VGAKFPI------KW-TAPEAIN 342
Query: 124 LSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
+ D W+ G ++ E++++ RI +PG ++ + I
Sbjct: 343 FGSFT-IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 379
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 87/185 (47%), Gaps = 6/185 (3%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HP +V L ++ ED+F+V D + DL ++++ +F E+ + ++ L Y+
Sbjct: 74 HPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYL 131
Query: 69 HRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
Q HRD+KP N+L+ + G + I D + + T T+ Y APE+ +
Sbjct: 132 QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKG 191
Query: 128 CGPE--VDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCSWNPRMRPTA 185
G VD W++G +E+L R + ++S ++ ++++ +W+ M
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLL 251
Query: 186 AEALE 190
+ LE
Sbjct: 252 KKLLE 256
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P +VKL K++ ++++V +Y+ + G+ FSE AR Q+ Y+
Sbjct: 99 NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR-FSEPHARFYAAQIVLTFEYL 157
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NLL+ +G I++ D G K + T APE+ +LS+
Sbjct: 158 HSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR--TWXLCGTPEALAPEI-ILSKG 214
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 252
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
N P +V+L ++ +++V +YM DL+ LM + + E AR +V L
Sbjct: 132 NSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLM---SNYDVPEKWARFYTAEVVLALDA 188
Query: 68 MHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSS--LPCTDYVTTRWYRAPEVLLL 124
+H G+ HRD+KP N+L+ K G +K+ D G +++ + C V T Y +PEVL
Sbjct: 189 IHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKS 248
Query: 125 ---SEICGPEVDRWAMGAIMFEML 145
G E D W++G ++EML
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEML 272
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H +V+L +V E E ++IV +YM + LL +K G+ + ++ Q+ G+ Y+
Sbjct: 239 HEKLVQLYAVVSE-EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYV 297
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTTRW------YRAPEV 121
R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +Y + + APE
Sbjct: 298 ERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDN----EYTARQGAKFPIKWTAPEA 353
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 354 ALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 399
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 78/162 (48%), Gaps = 9/162 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P + KL K++ ++++V +Y + G+ F E AR Q+ Y+
Sbjct: 100 NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR-FXEPHARFYAAQIVLTFEYL 158
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H +RDLKP NL++ +G IK+ D G K + T Y APE+ +LS+
Sbjct: 159 HSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR--TWXLCGTPEYLAPEI-ILSKG 215
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
VD WA+G +++EM + F ADQ +IY + V+
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPPF----FADQPIQIYEKIVS 253
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 77/148 (52%), Gaps = 12/148 (8%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLL-KLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HPN++ L +V + V I+ ++ME+ L ++++ GQ F+ + + + G+ Y
Sbjct: 92 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKY 150
Query: 68 MHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVK--EIDSSLPC-----TDYVTTRWYRAP 119
+ Y HRDL N+LV+ ++ K+ D G+ + E D+S P + RW AP
Sbjct: 151 LADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAP 209
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSF 147
E + + D W+ G +M+E++S+
Sbjct: 210 EAIQYRKFTSAS-DVWSYGIVMWEVMSY 236
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 13 IVKLRNLVKEHEDVFIVFDY-MESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQ 71
I L ++ +++V DY + DLL L+ + + ED AR ++ + +H+
Sbjct: 136 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQL 194
Query: 72 GYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI--DSSLPCTDYVTTRWYRAPEVLLLSEIC 128
Y HRD+KP N+L+ G I++ D G ++ D ++ + V T Y +PE+L E
Sbjct: 195 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 254
Query: 129 ----GPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR 166
GPE D W++G M+EML F A+ + + YG+
Sbjct: 255 MGKYGPECDWWSLGVCMYEMLYGETPF----YAESLVETYGK 292
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 107/238 (44%), Gaps = 38/238 (15%)
Query: 13 IVKLRNLVKEHEDVFIVFDY-MESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQ 71
I L ++ ++++V DY + DLL L+ + + E+ AR ++ + +H+
Sbjct: 136 ITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIAIDSVHQL 194
Query: 72 GYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI--DSSLPCTDYVTTRWYRAPEVLLLSEIC 128
Y HRD+KP N+L+ G I++ D G ++ D ++ + V T Y +PE+L E
Sbjct: 195 HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGG 254
Query: 129 ----GPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI--------YGRWVALIS---- 172
GPE D W++G M+EML F ++ + KI + V +S
Sbjct: 255 KGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAK 314
Query: 173 -----WLCSWNPRMRPTAAEAL-EHPFF--------RSCH--FVPR-SVPLLCNNFEA 213
+CS R+ E +HPFF R+C ++P S P +NF+
Sbjct: 315 DLIRRLICSREHRLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFDV 372
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 89/201 (44%), Gaps = 19/201 (9%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDY--MESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPNI++L + V+++ +Y + + +L K S F E ++ L Y
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS---RFDEQRTATYITELANALSY 127
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
H + HRD+KP NLL+ S G +KI D G SS T T Y PE ++
Sbjct: 128 CHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT-LCGTLDYLPPE-MIEGR 185
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI------YGRWVA-----LISWLC 175
+ +VD W++G + +E L F + +I + +V LIS L
Sbjct: 186 MHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTEGARDLISRLL 245
Query: 176 SWNPRMRPTAAEALEHPFFRS 196
N R T AE LEHP+ ++
Sbjct: 246 KHNASQRLTLAEVLEHPWIKA 266
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 17/149 (11%)
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI-DSSLPCTDYVTTRWYR 117
++ +GL Y+H + HRD+K +N+L+S +G +K+ D G+ ++ D+ + +V T ++
Sbjct: 124 EILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGTPFWM 183
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLS----------FRILF--PGKNSADQIYKIYG 165
APEV+ S + D W++G E+ R+LF P KNS + +
Sbjct: 184 APEVIKQS-AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP-KNSPPTLEGQHS 241
Query: 166 R-WVALISWLCSWNPRMRPTAAEALEHPF 193
+ + + + +PR RPTA E L+H F
Sbjct: 242 KPFKEFVEACLNKDPRFRPTAKELLKHKF 270
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 91/211 (43%), Gaps = 24/211 (11%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
LRK+ H NIV L ++ + +++V + +L + E ++E +A L QV
Sbjct: 74 LRKIK-HENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF--YTEKDASTLIRQVL 130
Query: 63 QGLHYMHRQGYFHRDLKPSNLLV----SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRA 118
++Y+HR G HRDLKP NLL + I I D G+ K + T Y A
Sbjct: 131 DAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVA 190
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSA---DQIYK------------I 163
PEV L + VD W++G I + +L F +N + +QI K I
Sbjct: 191 PEV-LAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYWDDI 249
Query: 164 YGRWVALISWLCSWNPRMRPTAAEALEHPFF 194
I L +P R T +A HP+
Sbjct: 250 SDSAKDFIRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HP +V+L + E + +VF++ME L + F+ + +C V +G+ Y+
Sbjct: 60 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 119
Query: 69 HRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEI--DSSLPCTDYVTTRWYRAPEVLLLS 125
HRDL N LV + VIK+ D GM + + D T + +PEV S
Sbjct: 120 EEASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 126 EICGPEVDRWAMGAIMFEMLS 146
+ D W+ G +M+E+ S
Sbjct: 180 RY-SSKSDVWSFGVLMWEVFS 199
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 83/163 (50%), Gaps = 8/163 (4%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLL-KLMKESAGQNFSEDEARNLCFQVFQGLHY 67
N P IV ++ I ++M+ L +++KE+ + E+ + V +GL Y
Sbjct: 72 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAY 129
Query: 68 M-HRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLS 125
+ + HRD+KPSN+LV S+G IK+ D G+ ++ S+ +V TR Y APE L +
Sbjct: 130 LREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMAPERLQGT 188
Query: 126 EICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWV 168
+ D W+MG + E+ R P + A ++ I+GR V
Sbjct: 189 HYS-VQSDIWSMGLSLVELAVGRYPIPPPD-AKELEAIFGRPV 229
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 13 IVKLRNLVKEHEDVFIVFDY-MESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQ 71
I L ++ +++V DY + DLL L+ + + ED AR ++ + +H+
Sbjct: 152 ITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK-LPEDMARFYIGEMVLAIDSIHQL 210
Query: 72 GYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI--DSSLPCTDYVTTRWYRAPEVLLLSEIC 128
Y HRD+KP N+L+ G I++ D G ++ D ++ + V T Y +PE+L E
Sbjct: 211 HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDG 270
Query: 129 ----GPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR 166
GPE D W++G M+EML F A+ + + YG+
Sbjct: 271 MGKYGPECDWWSLGVCMYEMLYGETPF----YAESLVETYGK 308
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 83/168 (49%), Gaps = 12/168 (7%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K H +V+L +V E E + IV +YM + LL +K G+ + ++ Q+ G
Sbjct: 58 KKLRHEKLVQLYAVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 116
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVTT---RWYRAPE 120
+ Y+ R Y HRDL+ +N+LV + ++ K+ D G+ + I+ + +W APE
Sbjct: 117 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKW-TAPE 175
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLS-FRILFPG---KNSADQIYKIY 164
L + D W+ G ++ E+ + R+ +PG + DQ+ + Y
Sbjct: 176 AALYGRFT-IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGY 222
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 86/166 (51%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + PNI+ L ++VK+ +VF+++ + K ++ Q ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLR----QTLTDYDIRFYMYEI 140
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H G HRD+KP N+++ +++ D G+ + V +R+++ P
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ ++ +D W++G ++ M+ FR F G ++ DQ+ +I
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRI 245
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 26 VFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQ-GYFHRDLKPSNLL 84
V +VF+ + +LL L+K+ + + + Q+ GL YMHR+ G H D+KP N+L
Sbjct: 105 VVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVL 164
Query: 85 V-------SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI-CGPEVDRWA 136
+ + IKI DLG D T+ + TR YR+PEVLL + CG ++ W+
Sbjct: 165 MEIVDSPENLIQIKIADLGNACWYDEHY--TNSIQTREYRSPEVLLGAPWGCGADI--WS 220
Query: 137 MGAIMFEMLSFRILF 151
++FE+++ LF
Sbjct: 221 TACLIFELITGDFLF 235
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Query: 26 VFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQ-GYFHRDLKPSNLL 84
V +VF+ + +LL L+K+ + + + Q+ GL YMHR+ G H D+KP N+L
Sbjct: 105 VVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVL 164
Query: 85 V-------SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI-CGPEVDRWA 136
+ + IKI DLG D T+ + TR YR+PEVLL + CG ++ W+
Sbjct: 165 MEIVDSPENLIQIKIADLGNACWYDEHY--TNSIQTREYRSPEVLLGAPWGCGADI--WS 220
Query: 137 MGAIMFEMLSFRILF 151
++FE+++ LF
Sbjct: 221 TACLIFELITGDFLF 235
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 86/165 (52%), Gaps = 17/165 (10%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K H +VKL +V + E ++I+ ++M + LL +K G + + Q+ +G
Sbjct: 65 KTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 123
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT-------TRWY 116
+ ++ ++ Y HRDL+ +N+LVS ++ KI D G+ + I+ + +Y +W
Sbjct: 124 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN----EYTAREGAKFPIKW- 178
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
APE + + D W+ G ++ E++++ RI +PG ++ + I
Sbjct: 179 TAPEAINFGSFT-IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 222
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCF-- 59
I L K H NIV+ E+ + I + + L + S ++E + + F
Sbjct: 70 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE-QTIGFYT 128
Query: 60 -QVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT-TRW 115
Q+ +GL Y+H HRD+K N+L++ GV+KI D G K + PCT+ T T
Sbjct: 129 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQ 188
Query: 116 YRAPEVLLLS-EICGPEVDRWAMGAIMFEMLSFRILF 151
Y APE++ G D W++G + EM + + F
Sbjct: 189 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESD-LLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+H +V+L + + +FI+ +YM + LL ++E F + +C V + + Y
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEY 135
Query: 68 MHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+ + + HRDL N LV+ +GV+K+ D G+ + + + + RW PEVL+
Sbjct: 136 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRW-SPPEVLM 194
Query: 124 LSEICGPEVDRWAMGAIMFEMLSF 147
S+ + D WA G +M+E+ S
Sbjct: 195 YSKFSS-KSDIWAFGVLMWEIYSL 217
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 49 FSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEI-DSSLP 106
E + + ++ +GL Y+H + HRD+K +N+L+S+ G +K+ D G+ ++ D+ +
Sbjct: 121 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 180
Query: 107 CTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEM------------LSFRILFPGK 154
+V T ++ APEV+ S + D W++G E+ + L P K
Sbjct: 181 RNTFVGTPFWMAPEVIKQS-AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-K 238
Query: 155 NSADQIYKIYGRWVALISWLC-SWNPRMRPTAAEALEHPFF 194
N+ + Y + + C + P RPTA E L+H F
Sbjct: 239 NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 279
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCF-- 59
I L K H NIV+ E+ + I + + L + S ++E + + F
Sbjct: 56 IALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNE-QTIGFYT 114
Query: 60 -QVFQGLHYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVT-TRW 115
Q+ +GL Y+H HRD+K N+L++ GV+KI D G K + PCT+ T T
Sbjct: 115 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTGTLQ 174
Query: 116 YRAPEVLLLS-EICGPEVDRWAMGAIMFEMLSFRILF 151
Y APE++ G D W++G + EM + + F
Sbjct: 175 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 39/187 (20%)
Query: 51 EDEARNLCFQVF----QGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEID--- 102
E+ R++C +F + + ++H +G HRDLKPSN+ + V+K+GD G+V +D
Sbjct: 113 EERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 172
Query: 103 ------SSLPC----TDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFP 152
+ +P T V T+ Y +PE + + +VD +++G I+FE+ L+P
Sbjct: 173 EEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSH-KVDIFSLGLILFEL-----LYP 226
Query: 153 GKNSADQIYKI---------------YGRWVALISWLCSWNPRMRPTAAEALEHPFFRSC 197
+++ + Y ++ + S +P RP A +E+ F
Sbjct: 227 FSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286
Query: 198 HFVPRSV 204
F ++V
Sbjct: 287 DFPGKTV 293
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V + E ++I+ +YME+ L+ +K +G + ++ ++ Q+
Sbjct: 61 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCT---DYVTTRWYRA 118
+G+ ++ + Y HRDL+ +N+LVS + KI D G+ + I+ + +W A
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKW-TA 178
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
PE + + D W+ G ++ E+++ RI +PG + + I
Sbjct: 179 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K H +VKL +V + E ++I+ ++M + LL +K G + + Q+ +G
Sbjct: 238 KTLQHDKLVKLHAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEG 296
Query: 65 LHYMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEI-DSSLPCTDYVT--TRWYRAPE 120
+ ++ ++ Y HRDL+ +N+LVS ++ KI D G+ + I D+ + +W APE
Sbjct: 297 MAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW-TAPE 355
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
+ + D W+ G ++ E++++ RI +PG ++ + I
Sbjct: 356 AINFGSFT-IKSDVWSFGILLMEIVTYGRIPYPGMSNPEVI 395
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HP +V+L + E + +VF++ME L + F+ + +C V +G+ Y+
Sbjct: 58 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 117
Query: 69 HRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEI--DSSLPCTDYVTTRWYRAPEVLLLS 125
HRDL N LV + VIK+ D GM + + D T + +PEV S
Sbjct: 118 EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 177
Query: 126 EICGPEVDRWAMGAIMFEMLS 146
+ D W+ G +M+E+ S
Sbjct: 178 RY-SSKSDVWSFGVLMWEVFS 197
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HP +V+L + E + +VF++ME L + F+ + +C V +G+ Y+
Sbjct: 60 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 119
Query: 69 HRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEI--DSSLPCTDYVTTRWYRAPEVLLLS 125
HRDL N LV + VIK+ D GM + + D T + +PEV S
Sbjct: 120 EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 179
Query: 126 EICGPEVDRWAMGAIMFEMLS 146
+ D W+ G +M+E+ S
Sbjct: 180 RY-SSKSDVWSFGVLMWEVFS 199
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + PNI+ L ++VK+ +VF+++ + K + Q ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEI 140
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H G HRD+KP N+L+ +++ D G+ + V +R+++ P
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ ++ +D W++G ++ M+ FR F G ++ DQ+ +I
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRI 245
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 49 FSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEI-DSSLP 106
E + + ++ +GL Y+H + HRD+K +N+L+S+ G +K+ D G+ ++ D+ +
Sbjct: 116 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 175
Query: 107 CTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEM------------LSFRILFPGK 154
+V T ++ APEV+ S + D W++G E+ + L P K
Sbjct: 176 RNXFVGTPFWMAPEVIKQS-AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-K 233
Query: 155 NSADQIYKIYGRWVALISWLC-SWNPRMRPTAAEALEHPFF 194
N+ + Y + + C + P RPTA E L+H F
Sbjct: 234 NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HP +V+L + E + +VF++ME L + F+ + +C V +G+ Y+
Sbjct: 63 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 122
Query: 69 HRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEI--DSSLPCTDYVTTRWYRAPEVLLLS 125
HRDL N LV + VIK+ D GM + + D T + +PEV S
Sbjct: 123 EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 182
Query: 126 EICGPEVDRWAMGAIMFEMLS 146
+ D W+ G +M+E+ S
Sbjct: 183 RY-SSKSDVWSFGVLMWEVFS 202
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI+ L +V + + V I+ +YME+ L F+ + + + G+ Y+
Sbjct: 88 DHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 147
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
HRDL N+LV+ ++ K+ D GM + ++ P Y T RW APE
Sbjct: 148 SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD-PEAAYTTRGGKIPIRWT-APEA 205
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +M+E++S+
Sbjct: 206 IAYRKFTSAS-DVWSYGIVMWEVMSY 230
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HP +V+L + E + +VF++ME L + F+ + +C V +G+ Y+
Sbjct: 80 SHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 139
Query: 69 HRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEI--DSSLPCTDYVTTRWYRAPEVLLLS 125
HRDL N LV + VIK+ D GM + + D T + +PEV S
Sbjct: 140 EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 199
Query: 126 EICGPEVDRWAMGAIMFEMLS 146
+ D W+ G +M+E+ S
Sbjct: 200 RY-SSKSDVWSFGVLMWEVFS 219
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 49 FSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEI-DSSLP 106
E + + ++ +GL Y+H + HRD+K +N+L+S+ G +K+ D G+ ++ D+ +
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 107 CTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEM------------LSFRILFPGK 154
+V T ++ APEV+ S + D W++G E+ + L P K
Sbjct: 161 RNTFVGTPFWMAPEVIKQS-AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-K 218
Query: 155 NSADQIYKIYGRWVALISWLC-SWNPRMRPTAAEALEHPFF 194
N+ + Y + + C + P RPTA E L+H F
Sbjct: 219 NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESD-LLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+H +V+L + + +FI+ +YM + LL ++E F + +C V + + Y
Sbjct: 77 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEY 135
Query: 68 MHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+ + + HRDL N LV+ +GV+K+ D G+ + + + + RW PEVL+
Sbjct: 136 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPPEVLM 194
Query: 124 LSEICGPEVDRWAMGAIMFEMLSF 147
S+ + D WA G +M+E+ S
Sbjct: 195 YSKFSS-KSDIWAFGVLMWEIYSL 217
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 105/238 (44%), Gaps = 31/238 (13%)
Query: 4 LRKMNNHPNIVKL-----RNLVKEHEDVFIVFDYMESDLLKLMK--ESAGQNFSEDEARN 56
+ ++ NHPNI++L R +HE ++ + L ++ + G +ED+
Sbjct: 79 MHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW 138
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLG-------MVKEIDSSLPCT 108
L + +GL +H +GY HRDLKP+N+L+ +G + DLG V+ +L
Sbjct: 139 LLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQ 198
Query: 109 DYVTTR---WYRAPEVLLLSEIC--GPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
D+ R YRAPE+ + C D W++G +++ M+ G+ D +++
Sbjct: 199 DWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMF------GEGPYDMVFQ- 251
Query: 164 YGRWVALI---SWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAVAFPT 218
G VAL +PR + L H P +PLL + EA+ P
Sbjct: 252 KGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPH-IPLLLSQLEALQPPA 308
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + PNI+ L ++VK+ +VF+++ + K + Q ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEI 140
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H G HRD+KP N+++ +++ D G+ + V +R+++ P
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ ++ +D W++G ++ M+ FR F G ++ DQ+ +I
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRI 245
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 49 FSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEI-DSSLP 106
E + + ++ +GL Y+H + HRD+K +N+L+S+ G +K+ D G+ ++ D+ +
Sbjct: 101 LDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK 160
Query: 107 CTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEM------------LSFRILFPGK 154
+V T ++ APEV+ S + D W++G E+ + L P K
Sbjct: 161 RNXFVGTPFWMAPEVIKQS-AYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIP-K 218
Query: 155 NSADQIYKIYGRWVALISWLC-SWNPRMRPTAAEALEHPFF 194
N+ + Y + + C + P RPTA E L+H F
Sbjct: 219 NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESD-LLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+H +V+L + + +FI+ +YM + LL ++E F + +C V + + Y
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEY 120
Query: 68 MHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+ + + HRDL N LV+ +GV+K+ D G+ + + + + RW PEVL+
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPPEVLM 179
Query: 124 LSEICGPEVDRWAMGAIMFEMLSF 147
S+ + D WA G +M+E+ S
Sbjct: 180 YSKF-SSKSDIWAFGVLMWEIYSL 202
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESD-LLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+H +V+L + + +FI+ +YM + LL ++E F + +C V + + Y
Sbjct: 57 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLRE-MRHRFQTQQLLEMCKDVCEAMEY 115
Query: 68 MHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+ + + HRDL N LV+ +GV+K+ D G+ + + + + RW PEVL+
Sbjct: 116 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPPEVLM 174
Query: 124 LSEICGPEVDRWAMGAIMFEMLSF 147
S+ + D WA G +M+E+ S
Sbjct: 175 YSKF-SSKSDIWAFGVLMWEIYSL 197
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 8/144 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESD-LLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+H +V+L + + +FI+ +YM + LL ++E F + +C V + + Y
Sbjct: 68 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEY 126
Query: 68 MHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+ + + HRDL N LV+ +GV+K+ D G+ + + + + RW PEVL+
Sbjct: 127 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPPEVLM 185
Query: 124 LSEICGPEVDRWAMGAIMFEMLSF 147
S+ + D WA G +M+E+ S
Sbjct: 186 YSKF-SSKSDIWAFGVLMWEIYSL 208
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V + E ++I+ +YME+ L+ +K +G + ++ ++ Q+
Sbjct: 70 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 128
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCT---DYVTTRWYRA 118
+G+ ++ + Y HRDL+ +N+LVS + KI D G+ + I+ + +W A
Sbjct: 129 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TA 187
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
PE + + D W+ G ++ E+++ RI +PG + + I
Sbjct: 188 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 229
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESD-LLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+H +V+L + + +FI+ +YM + LL ++E F + +C V + + Y
Sbjct: 61 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEY 119
Query: 68 MHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI---DSSLPCTDYVTTRWYRAPEVLL 123
+ + + HRDL N LV+ +GV+K+ D G+ + + + + RW PEVL+
Sbjct: 120 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW-SPPEVLM 178
Query: 124 LSEICGPEVDRWAMGAIMFEMLSF 147
S+ D WA G +M+E+ S
Sbjct: 179 YSKFSSKS-DIWAFGVLMWEIYSL 201
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V + E ++I+ +YME+ L+ +K +G + ++ ++ Q+
Sbjct: 67 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVT-------TR 114
+G+ ++ + Y HRDL+ +N+LVS + KI D G+ + I+ + +Y +
Sbjct: 126 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN----EYTAREGAKFPIK 181
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
W APE + + D W+ G ++ E+++ RI +PG + + I
Sbjct: 182 W-TAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V + E ++I+ +YME+ L+ +K +G + ++ ++ Q+
Sbjct: 69 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 127
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCT---DYVTTRWYRA 118
+G+ ++ + Y HRDL+ +N+LVS + KI D G+ + I+ + +W A
Sbjct: 128 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TA 186
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
PE + + D W+ G ++ E+++ RI +PG + + I
Sbjct: 187 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 228
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 61.6 bits (148), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V + E ++I+ +YME+ L+ +K +G + ++ ++ Q+
Sbjct: 71 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 129
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVT-------TR 114
+G+ ++ + Y HRDL+ +N+LVS + KI D G+ + I+ + +Y +
Sbjct: 130 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN----EYTAREGAKFPIK 185
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
W APE + + D W+ G ++ E+++ RI +PG + + I
Sbjct: 186 W-TAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 230
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V + E ++I+ +YME+ L+ +K +G + ++ ++ Q+
Sbjct: 67 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 125
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCT---DYVTTRWYRA 118
+G+ ++ + Y HRDL+ +N+LVS + KI D G+ + I+ + +W A
Sbjct: 126 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TA 184
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
PE + + D W+ G ++ E+++ RI +PG + + I
Sbjct: 185 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 226
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V + E ++I+ +YME+ L+ +K +G + ++ ++ Q+
Sbjct: 66 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 124
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVT-------TR 114
+G+ ++ + Y HRDL+ +N+LVS + KI D G+ + I+ + +Y +
Sbjct: 125 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN----EYTAREGAKFPIK 180
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
W APE + + D W+ G ++ E+++ RI +PG + + I
Sbjct: 181 W-TAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 225
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V + E ++I+ +YME+ L+ +K +G + ++ ++ Q+
Sbjct: 61 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVT-------TR 114
+G+ ++ + Y HRDL+ +N+LVS + KI D G+ + I+ + +Y +
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN----EYTAREGAKFPIK 175
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
W APE + + D W+ G ++ E+++ RI +PG + + I
Sbjct: 176 W-TAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V + E ++I+ +YME+ L+ +K +G + ++ ++ Q+
Sbjct: 63 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 121
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCT---DYVTTRWYRA 118
+G+ ++ + Y HRDL+ +N+LVS + KI D G+ + I+ + +W A
Sbjct: 122 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TA 180
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
PE + + D W+ G ++ E+++ RI +PG + + I
Sbjct: 181 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 222
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V + E ++I+ +YME+ L+ +K +G + ++ ++ Q+
Sbjct: 61 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCT---DYVTTRWYRA 118
+G+ ++ + Y HRDL+ +N+LVS + KI D G+ + I+ + +W A
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TA 178
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
PE + + D W+ G ++ E+++ RI +PG + + I
Sbjct: 179 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V + E ++I+ +YME+ L+ +K +G + ++ ++ Q+
Sbjct: 62 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 120
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCT---DYVTTRWYRA 118
+G+ ++ + Y HRDL+ +N+LVS + KI D G+ + I+ + +W A
Sbjct: 121 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TA 179
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
PE + + D W+ G ++ E+++ RI +PG + + I
Sbjct: 180 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 221
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V + E ++I+ +YME+ L+ +K +G + ++ ++ Q+
Sbjct: 56 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 114
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVT-------TR 114
+G+ ++ + Y HRDL+ +N+LVS + KI D G+ + I+ + +Y +
Sbjct: 115 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDN----EYTAREGAKFPIK 170
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
W APE + + D W+ G ++ E+++ RI +PG + + I
Sbjct: 171 W-TAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 215
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + PNI+ L ++VK+ +VF+++ + K + Q ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEI 140
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H G HRD+KP N+++ +++ D G+ + V +R+++ P
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ ++ +D W++G ++ M+ FR F G ++ DQ+ +I
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRI 245
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 86/163 (52%), Gaps = 9/163 (5%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V + E ++I+ +YME+ L+ +K +G + ++ ++ Q+
Sbjct: 61 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 119
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCT---DYVTTRWYRA 118
+G+ ++ + Y HRDL+ +N+LVS + KI D G+ + I+ + +W A
Sbjct: 120 EGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKW-TA 178
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
PE + + D W+ G ++ E+++ RI +PG + + I
Sbjct: 179 PEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 220
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + PNI+ L ++VK+ +VF+++ + K + Q ++ + R +++
Sbjct: 90 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEI 145
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H G HRD+KP N+++ +++ D G+ + V +R+++ P
Sbjct: 146 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 205
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ ++ +D W++G ++ M+ FR F G ++ DQ+ +I
Sbjct: 206 ELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRI 250
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 55 IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 112
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 229
Query: 177 W 177
W
Sbjct: 230 W 230
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 55 IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 112
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 229
Query: 177 W 177
W
Sbjct: 230 W 230
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + PNI+ L ++VK+ +VF+++ + K + Q ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEI 140
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H G HRD+KP N+++ +++ D G+ + V +R+++ P
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ ++ +D W++G ++ M+ FR F G ++ DQ+ +I
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRI 245
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 8/146 (5%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEARNLCFQVFQGLH 66
HP++V L E ++ +++ YME+ LK + + S ++ +C +GLH
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 67 YMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVK---EIDSSLPCTDYVTTRWYRAPEVL 122
Y+H + HRD+K N+L+ + + KI D G+ K E+D + T Y PE
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYF 213
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFR 148
+ + + D ++ G ++FE+L R
Sbjct: 214 IKGRLT-EKSDVYSFGVVLFEVLCAR 238
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 56 IXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 113
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 173
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 230
Query: 177 W 177
W
Sbjct: 231 W 231
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 29/174 (16%)
Query: 51 EDEARNLCFQVF----QGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSS- 104
ED +C +F + + ++H +G HRDLKPSN+ + V+K+GD G+V +D
Sbjct: 159 EDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDE 218
Query: 105 ------LPCTDYVT------TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEML-SF---- 147
P Y T T+ Y +PE + + +VD +++G I+FE+L SF
Sbjct: 219 EEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSH-KVDIFSLGLILFELLYSFSTQM 277
Query: 148 ---RILFPGKNSADQIY--KIYGRWVALISWLCSWNPRMRPTAAEALEHPFFRS 196
RI+ +N + + Y + ++ + S +P RP A + +E+ F +
Sbjct: 278 ERVRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + PNI+ L ++VK+ +VF+++ + K + Q ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEI 140
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H G HRD+KP N+++ +++ D G+ + V +R+++ P
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ ++ +D W++G ++ M+ FR F G ++ DQ+ +I
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRI 245
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + PNI+ L ++VK+ +VF+++ + K + Q ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEI 140
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H G HRD+KP N+++ +++ D G+ + V +R+++ P
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ ++ +D W++G ++ M+ FR F G ++ DQ+ +I
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRI 245
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 113
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 230
Query: 177 W 177
W
Sbjct: 231 W 231
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 48 NFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLP 106
F E A Q+ GL ++H++ +RDLKP N+L+ G ++I DLG+ E+ +
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 107 CT-DYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNS 156
T Y T + APE LLL E VD +A+G ++EM++ R F +
Sbjct: 345 KTKGYAGTPGFMAPE-LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + PNI+ L ++VK+ +VF+++ + K + Q ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEI 140
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H G HRD+KP N+++ +++ D G+ + V +R+++ P
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ ++ +D W++G ++ M+ FR F G ++ DQ+ +I
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRI 245
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + PNI+ L ++VK+ +VF+++ + K + Q ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEI 140
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H G HRD+KP N+++ +++ D G+ + V +R+++ P
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ ++ +D W++G ++ M+ FR F G ++ DQ+ +I
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRI 245
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 21/191 (10%)
Query: 25 DVFIVFDYMESDLLKLMKE--SAGQNFSEDEARNLCFQVFQGLHYMHRQ-GYFHRDLKPS 81
DV+I + M++ L K K+ GQ ED + + + L ++H + HRD+KPS
Sbjct: 80 DVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPS 139
Query: 82 NLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVL---LLSEICGPEVDRWAM 137
N+L++ G +K+ D G+ + + + Y APE + L + + D W++
Sbjct: 140 NVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSL 199
Query: 138 GAIMFEMLSFRILFPGKNSADQ--------------IYKIYGRWVALISWLCSWNPRMRP 183
G M E+ R + + Q K +V S N + RP
Sbjct: 200 GITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERP 259
Query: 184 TAAEALEHPFF 194
T E ++HPFF
Sbjct: 260 TYPELMQHPFF 270
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 112
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 229
Query: 177 W 177
W
Sbjct: 230 W 230
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + PNI+ L ++VK+ +VF+++ + K + Q ++ + R +++
Sbjct: 84 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEI 139
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H G HRD+KP N+++ +++ D G+ + V +R+++ P
Sbjct: 140 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 199
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ ++ +D W++G ++ M+ FR F G ++ DQ+ +I
Sbjct: 200 ELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRI 244
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 10 HPNIVKLRN-LVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H N+V+L +V+E ++IV +YM + L+ ++ D V + + Y
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 304
Query: 68 MHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+ + HRDL N+LVS+ V K+ D G+ KE SS T + +W APE L +
Sbjct: 305 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA-SSTQDTGKLPVKW-TAPEALREKK 362
Query: 127 ICGPEVDRWAMGAIMFEMLSF-RILFP 152
+ D W+ G +++E+ SF R+ +P
Sbjct: 363 FS-TKSDVWSFGILLWEIYSFGRVPYP 388
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + PNI+ L ++VK+ +VF+++ + K + Q ++ + R +++
Sbjct: 84 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEI 139
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H G HRD+KP N+++ +++ D G+ + V +R+++ P
Sbjct: 140 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 199
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ ++ +D W++G ++ M+ FR F G ++ DQ+ +I
Sbjct: 200 ELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRI 244
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 61.2 bits (147), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 48 NFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLP 106
F E A Q+ GL ++H++ +RDLKP N+L+ G ++I DLG+ E+ +
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 107 CT-DYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNS 156
T Y T + APE LLL E VD +A+G ++EM++ R F +
Sbjct: 345 KTKGYAGTPGFMAPE-LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + PNI+ L ++VK+ +VF+++ + K + Q ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEI 140
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H G HRD+KP N+++ +++ D G+ + V +R+++ P
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ ++ +D W++G ++ M+ FR F G ++ DQ+ +I
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRI 245
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 1 MIFLRKMN--NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQ--NFSEDEARN 56
++ LR+++ NHPNIVKL V +V +Y E L + A ++ A +
Sbjct: 50 IVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 107
Query: 57 LCFQVFQGLHYMHR---QGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYV 111
C Q QG+ Y+H + HRDLKP NLL+ G V+KI D G +I + + T+
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM--TNNK 165
Query: 112 TTRWYRAPEVLL---LSEICGPEVDRWAMGAIMFEMLSFRILF 151
+ + APEV SE C D ++ G I++E+++ R F
Sbjct: 166 GSAAWMAPEVFEGSNYSEKC----DVFSWGIILWEVITRRKPF 204
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 112
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSXQE-YSDWKEKKTYLNP 229
Query: 177 W 177
W
Sbjct: 230 W 230
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 112
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 229
Query: 177 W 177
W
Sbjct: 230 W 230
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 113
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 230
Query: 177 W 177
W
Sbjct: 231 W 231
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 113
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 230
Query: 177 W 177
W
Sbjct: 231 W 231
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 113
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 230
Query: 177 W 177
W
Sbjct: 231 W 231
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESD-LLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+H +V+L + + +FI+ +YM + LL ++E F + +C V + + Y
Sbjct: 62 SHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEY 120
Query: 68 MHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRW------YRAPE 120
+ + + HRDL N LV+ +GV+K+ D G+ + + +Y ++R + PE
Sbjct: 121 LESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD----EYTSSRGSKFPVRWSPPE 176
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSF 147
VL+ S+ + D WA G +M+E+ S
Sbjct: 177 VLMYSKF-SSKSDIWAFGVLMWEIYSL 202
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 48 NFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLP 106
F E A Q+ GL ++H++ +RDLKP N+L+ G ++I DLG+ E+ +
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 107 CT-DYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNS 156
T Y T + APE LLL E VD +A+G ++EM++ R F +
Sbjct: 345 KTKGYAGTPGFMAPE-LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 112
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 229
Query: 177 W 177
W
Sbjct: 230 W 230
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 54 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 111
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 112 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 171
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 228
Query: 177 W 177
W
Sbjct: 229 W 229
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 112
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 229
Query: 177 W 177
W
Sbjct: 230 W 230
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 59/111 (53%), Gaps = 3/111 (2%)
Query: 48 NFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLP 106
F E A Q+ GL ++H++ +RDLKP N+L+ G ++I DLG+ E+ +
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
Query: 107 CT-DYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNS 156
T Y T + APE LLL E VD +A+G ++EM++ R F +
Sbjct: 345 KTKGYAGTPGFMAPE-LLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + PNI+ L ++VK+ +VF+++ + K + Q ++ + R +++
Sbjct: 83 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEI 138
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H G HRD+KP N+++ +++ D G+ + V +R+++ P
Sbjct: 139 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 198
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ ++ +D W++G ++ M+ FR F G ++ DQ+ +I
Sbjct: 199 ELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRI 243
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 113
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 230
Query: 177 W 177
W
Sbjct: 231 W 231
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 112
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 229
Query: 177 W 177
W
Sbjct: 230 W 230
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 85/166 (51%), Gaps = 11/166 (6%)
Query: 4 LRKMNNHPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
L + PNI+ L ++VK+ +VF+++ + K + Q ++ + R +++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY----QTLTDYDIRFYMYEI 140
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAP 119
+ L Y H G HRD+KP N+++ +++ D G+ + V +R+++ P
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGP 200
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRI--LFPGKNSADQIYKI 163
E+L+ ++ +D W++G ++ M+ FR F G ++ DQ+ +I
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMI-FRKEPFFHGHDNYDQLVRI 245
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 56 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 113
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 230
Query: 177 W 177
W
Sbjct: 231 W 231
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 112
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 229
Query: 177 W 177
W
Sbjct: 230 W 230
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 10 HPNIVKLRN-LVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H N+V+L +V+E ++IV +YM + L+ ++ D V + + Y
Sbjct: 73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 132
Query: 68 MHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+ + HRDL N+LVS+ V K+ D G+ KE SS T + +W APE L +
Sbjct: 133 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA-SSTQDTGKLPVKW-TAPEALREKK 190
Query: 127 ICGPEVDRWAMGAIMFEMLSF-RILFP 152
+ D W+ G +++E+ SF R+ +P
Sbjct: 191 FS-TKSDVWSFGILLWEIYSFGRVPYP 216
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 112
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 229
Query: 177 W 177
W
Sbjct: 230 W 230
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 10 HPNIVKLRN-LVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H N+V+L +V+E ++IV +YM + L+ ++ D V + + Y
Sbjct: 64 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 123
Query: 68 MHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+ + HRDL N+LVS+ V K+ D G+ KE SS T + +W APE L +
Sbjct: 124 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA-SSTQDTGKLPVKW-TAPEALREAA 181
Query: 127 ICGPEVDRWAMGAIMFEMLSF-RILFP 152
+ D W+ G +++E+ SF R+ +P
Sbjct: 182 FS-TKSDVWSFGILLWEIYSFGRVPYP 207
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 112
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 229
Query: 177 W 177
W
Sbjct: 230 W 230
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + KM NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 55 ICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 112
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 113 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 229
Query: 177 W 177
W
Sbjct: 230 W 230
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 6/143 (4%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HP +VK + + ++IV +Y+ + L S G+ + +C+ V +G+ ++
Sbjct: 61 SHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL 120
Query: 69 HRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVT---TRWYRAPEVLLL 124
+ HRDL N LV + + +K+ D GM + + + T +W APEV
Sbjct: 121 ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKW-SAPEVFHY 179
Query: 125 SEICGPEVDRWAMGAIMFEMLSF 147
+ + D WA G +M+E+ S
Sbjct: 180 FKY-SSKSDVWAFGILMWEVFSL 201
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 103/223 (46%), Gaps = 32/223 (14%)
Query: 3 FLRKMNNHPNIVKL------RNLVKEHEDVFIVFDY-MESDLLKLMKESAGQNFSEDEAR 55
L+K ++H NI +N + +++V ++ + L+K + G E+
Sbjct: 73 MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIA 132
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTD-YVTT 113
+C ++ +GL ++H+ HRD+K N+L+++ +K+ D G+ ++D ++ + ++ T
Sbjct: 133 YICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGT 192
Query: 114 RWYRAPEVLLLSEICGPEV------DRWAMGAIMFEMLS----------FRILF--PGKN 155
++ APEV+ E P+ D W++G EM R LF P +N
Sbjct: 193 PYWMAPEVIACDE--NPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP-RN 249
Query: 156 SADQI--YKIYGRWVALISWLCSWNPRMRPTAAEALEHPFFRS 196
A ++ K ++ + I N RP + ++HPF R
Sbjct: 250 PAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRD 292
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 82/163 (50%), Gaps = 20/163 (12%)
Query: 1 MIFLRKMN--NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQ--NFSEDEARN 56
++ LR+++ NHPNIVKL V +V +Y E L + A ++ A +
Sbjct: 49 IVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMS 106
Query: 57 LCFQVFQGLHYMHR---QGYFHRDLKPSNLLVSKG--VIKIGDLGMVKEIDSSLPCTDYV 111
C Q QG+ Y+H + HRDLKP NLL+ G V+KI D G +I + + T+
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM--TNNK 164
Query: 112 TTRWYRAPEVLL---LSEICGPEVDRWAMGAIMFEMLSFRILF 151
+ + APEV SE C D ++ G I++E+++ R F
Sbjct: 165 GSAAWMAPEVFEGSNYSEKC----DVFSWGIILWEVITRRKPF 203
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 7/147 (4%)
Query: 10 HPNIVKLRN-LVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H N+V+L +V+E ++IV +YM + L+ ++ D V + + Y
Sbjct: 58 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 117
Query: 68 MHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+ + HRDL N+LVS+ V K+ D G+ KE SS T + +W APE L +
Sbjct: 118 LEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEA-SSTQDTGKLPVKW-TAPEALREKK 175
Query: 127 ICGPEVDRWAMGAIMFEMLSF-RILFP 152
+ D W+ G +++E+ SF R+ +P
Sbjct: 176 FS-TKSDVWSFGILLWEIYSFGRVPYP 201
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 7/192 (3%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P IV ++ I ++M+ L + + AG+ E + V +GL Y+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYL 120
Query: 69 -HRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+ HRD+KPSN+LV S+G IK+ D G+ ++ S+ +V TR Y +PE L +
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 179
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCSWNPRMRPTAA 186
+ D W+MG + EM R P ++ + + L+ ++ + P P+
Sbjct: 180 YS-VQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIF-ELLDYIVNEPPPKLPSGV 237
Query: 187 EALE-HPFFRSC 197
+LE F C
Sbjct: 238 FSLEFQDFVNKC 249
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 12/148 (8%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLL-KLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HPN++ L +V + V I+ ++ME+ L ++++ GQ F+ + + + G+ Y
Sbjct: 66 DHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAAGMKY 124
Query: 68 MHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVK--EIDSSLPC-----TDYVTTRWYRAP 119
+ Y HR L N+LV+ ++ K+ D G+ + E D+S P + RW AP
Sbjct: 125 LADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRW-TAP 183
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSF 147
E + + D W+ G +M+E++S+
Sbjct: 184 EAIQYRKFTSAS-DVWSYGIVMWEVMSY 210
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HPNI++L +V + + V IV + ME+ L F+ + + + G+ Y+
Sbjct: 104 DHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYL 163
Query: 69 HRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVKEIDSSLPCTDYVT------TRWYRAPEV 121
G HRDL N+L++ ++ K+ D G+ + ++ P Y T RW +PE
Sbjct: 164 SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDD-PEAAYTTRGGKIPIRW-TSPEA 221
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
+ + D W+ G +++E++S+
Sbjct: 222 IAYRKFTSAS-DVWSYGIVLWEVMSY 246
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 94/256 (36%), Gaps = 78/256 (30%)
Query: 14 VKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQGY 73
V++ + H + IVF+ + +KE+ F D R + +Q+ + ++++H
Sbjct: 80 VQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKL 139
Query: 74 FHRDLKPSNLLVSKG--------------------VIKIGDLGMVKEIDSSLPCTDYVTT 113
H DLKP N+L + IK+ D G D + V+T
Sbjct: 140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH--HSTLVST 197
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI------------- 160
R YRAPEV+L P D W++G I+ E +FP +S + +
Sbjct: 198 RHYRAPEVILALGWSQP-CDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKH 256
Query: 161 --------------------YKIYGRWVA----------------------LISWLCSWN 178
+ GR+V+ LI + ++
Sbjct: 257 MIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYD 316
Query: 179 PRMRPTAAEALEHPFF 194
P R T EAL+HPFF
Sbjct: 317 PAKRITLREALKHPFF 332
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P IV ++ I ++M+ L + + AG+ E + V +GL Y+
Sbjct: 124 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYL 182
Query: 69 -HRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+ HRD+KPSN+LV S+G IK+ D G+ ++ S+ +V TR Y +PE L +
Sbjct: 183 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 241
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFP 152
+ D W+MG + EM R P
Sbjct: 242 YS-VQSDIWSMGLSLVEMAVGRYPIP 266
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 13/192 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P IV ++ I ++M+ L + + AG+ E + V +GL Y+
Sbjct: 81 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYL 139
Query: 69 -HRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+ HRD+KPSN+LV S+G IK+ D G+ ++ S+ +V TR Y +PE L +
Sbjct: 140 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 198
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCSWNPRMRPTAA 186
+ D W+MG + EM R + + I++ L+ ++ + P P+
Sbjct: 199 YS-VQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFE-------LLDYIVNEPPPKLPSGV 250
Query: 187 EALE-HPFFRSC 197
+LE F C
Sbjct: 251 FSLEFQDFVNKC 262
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 88/167 (52%), Gaps = 17/167 (10%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVF 62
L K H +V+L +V + E ++I+ +YME+ L+ +K +G + ++ ++ Q+
Sbjct: 57 LMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIA 115
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVT-------TR 114
+G+ ++ + Y HR+L+ +N+LVS + KI D G+ + I+ + +Y +
Sbjct: 116 EGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLARLIEDN----EYTAREGAKFPIK 171
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQI 160
W APE + + D W+ G ++ E+++ RI +PG + + I
Sbjct: 172 W-TAPEAINYGTFT-IKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI 216
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P IV ++ I ++M+ L + + AG+ E + V +GL Y+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYL 120
Query: 69 -HRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+ HRD+KPSN+LV S+G IK+ D G+ ++ S+ +V TR Y +PE L +
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 179
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFP 152
+ D W+MG + EM R P
Sbjct: 180 YS-VQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P IV ++ I ++M+ L + + AG+ E + V +GL Y+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYL 120
Query: 69 -HRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+ HRD+KPSN+LV S+G IK+ D G+ ++ S+ +V TR Y +PE L +
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 179
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFP 152
+ D W+MG + EM R P
Sbjct: 180 YS-VQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 49 FSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPC 107
FSE + R ++ GL +MH + +RDLKP+N+L+ + G ++I DLG+ + P
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 108 TDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRW 167
V T Y APEVL D +++G ++F++L F + D+
Sbjct: 349 AS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
Query: 168 VALISWLCSWNPRMRP-------------------TAAEALEHPFFRS 196
+ S++P +R A E E PFFRS
Sbjct: 408 TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 49 FSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPC 107
FSE + R ++ GL +MH + +RDLKP+N+L+ + G ++I DLG+ + P
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 108 TDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRW 167
V T Y APEVL D +++G ++F++L F + D+
Sbjct: 349 AS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
Query: 168 VALISWLCSWNPRMRP-------------------TAAEALEHPFFRS 196
+ S++P +R A E E PFFRS
Sbjct: 408 TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 17/200 (8%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPNI+++ N + + ++++ ++ +L K +++ F E + ++ LHY
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYC 130
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H + HRD+KP NLL+ KG +KI D G SL T Y PE ++ +
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHA-PSLRRRXMCGTLDYLPPE-MIEGKT 188
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA-----------LISWLCS 176
+VD W G + +E L F + + +I + LIS L
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 248
Query: 177 WNPRMRPTAAEALEHPFFRS 196
++P R +EHP+ ++
Sbjct: 249 YHPPQRLPLKGVMEHPWVKA 268
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 17/200 (8%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPNI+++ N + + ++++ ++ +L K +++ F E + ++ LHY
Sbjct: 74 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYC 131
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H + HRD+KP NLL+ KG +KI D G SL T Y PE ++ +
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHA-PSLRRRXMCGTLDYLPPE-MIEGKT 189
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA-----------LISWLCS 176
+VD W G + +E L F + + +I + LIS L
Sbjct: 190 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 249
Query: 177 WNPRMRPTAAEALEHPFFRS 196
++P R +EHP+ ++
Sbjct: 250 YHPPQRLPLKGVMEHPWVKA 269
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 49 FSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPC 107
FSE + R ++ GL +MH + +RDLKP+N+L+ + G ++I DLG+ + P
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 348
Query: 108 TDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRW 167
V T Y APEVL D +++G ++F++L F + D+
Sbjct: 349 AS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 407
Query: 168 VALISWLCSWNPRMRP-------------------TAAEALEHPFFRS 196
+ S++P +R A E E PFFRS
Sbjct: 408 TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 455
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 88/200 (44%), Gaps = 17/200 (8%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPNI+++ N + + ++++ ++ +L K +++ F E + ++ LHY
Sbjct: 73 HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYC 130
Query: 69 HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
H + HRD+KP NLL+ KG +KI D G SL T Y PE ++ +
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHA-PSLRRRXMCGTLDYLPPE-MIEGKT 188
Query: 128 CGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA-----------LISWLCS 176
+VD W G + +E L F + + +I + LIS L
Sbjct: 189 HDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 248
Query: 177 WNPRMRPTAAEALEHPFFRS 196
++P R +EHP+ ++
Sbjct: 249 YHPPQRLPLKGVMEHPWVKA 268
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 73/168 (43%), Gaps = 21/168 (12%)
Query: 49 FSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPC 107
FSE + R ++ GL +MH + +RDLKP+N+L+ + G ++I DLG+ + P
Sbjct: 288 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH 347
Query: 108 TDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRW 167
V T Y APEVL D +++G ++F++L F + D+
Sbjct: 348 AS-VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTL 406
Query: 168 VALISWLCSWNPRMRP-------------------TAAEALEHPFFRS 196
+ S++P +R A E E PFFRS
Sbjct: 407 TMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRS 454
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P IV ++ I ++M+ L + + AG+ E + V +GL Y+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYL 120
Query: 69 -HRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+ HRD+KPSN+LV S+G IK+ D G+ ++ S+ +V TR Y +PE L +
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 179
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFP 152
+ D W+MG + EM R P
Sbjct: 180 YS-VQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P IV ++ I ++M+ L + + AG+ E + V +GL Y+
Sbjct: 62 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYL 120
Query: 69 -HRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+ HRD+KPSN+LV S+G IK+ D G+ ++ S+ +V TR Y +PE L +
Sbjct: 121 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 179
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFP 152
+ D W+MG + EM R P
Sbjct: 180 YS-VQSDIWSMGLSLVEMAVGRYPIP 204
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q S + Q+ + Y
Sbjct: 65 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 125 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTXTAHAGAKFPIKW-TA 178
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 179 PESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDPS-QVYELLEKDYRMERPEGCP 236
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAE 259
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 67/122 (54%), Gaps = 3/122 (2%)
Query: 26 VFIVFDYMESDLLKL-MKESAGQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNL- 83
+FI ++ + L+ +++ G+ + A L Q+ +G+ Y+H + +RDLKPSN+
Sbjct: 95 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIF 154
Query: 84 LVSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFE 143
LV +KIGD G+V + + T Y +PE + S+ G EVD +A+G I+ E
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQ-ISSQDYGKEVDLYALGLILAE 213
Query: 144 ML 145
+L
Sbjct: 214 LL 215
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 76/160 (47%), Gaps = 7/160 (4%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL--CFQVFQGLHY 67
HPNIV V + ++ IV +Y+ L + +G DE R L + V +G++Y
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 68 MHRQG--YFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSS-LPCTDYVTTRWYRAPEVLL 123
+H + HRDLK NLLV K +K+ D G+ + S L T + APEV L
Sbjct: 153 LHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEV-L 211
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
E + D ++ G I++E+ + + + N A + +
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV 251
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P IV ++ I ++M+ L + + AG+ E + V +GL Y+
Sbjct: 89 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYL 147
Query: 69 -HRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+ HRD+KPSN+LV S+G IK+ D G+ ++ S+ +V TR Y +PE L +
Sbjct: 148 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-ANSFVGTRSYMSPERLQGTH 206
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFP 152
+ D W+MG + EM R P
Sbjct: 207 YS-VQSDIWSMGLSLVEMAVGRYPIP 231
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 4/141 (2%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+HP +V+L + E + +V ++ME L + F+ + +C V +G+ Y+
Sbjct: 61 SHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL 120
Query: 69 HRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEI--DSSLPCTDYVTTRWYRAPEVLLLS 125
HRDL N LV + VIK+ D GM + + D T + +PEV S
Sbjct: 121 EEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS 180
Query: 126 EICGPEVDRWAMGAIMFEMLS 146
+ D W+ G +M+E+ S
Sbjct: 181 RY-SSKSDVWSFGVLMWEVFS 200
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 94/219 (42%), Gaps = 24/219 (10%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQ-NFSEDEARNLCFQV 61
L K+N+ +V L + + + +V M LK GQ F E A ++
Sbjct: 237 ILEKVNSR-FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPE 120
GL +HR+ +RDLKP N+L+ G I+I DLG+ + V T Y APE
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPE 355
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNS----------ADQIYKIYGRWV-- 168
V + +E D WA+G +++EM++ + F + ++ + Y
Sbjct: 356 V-VKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSP 414
Query: 169 ---ALISWLCSWNPRMR-----PTAAEALEHPFFRSCHF 199
+L S L +P R +A E EHP F+ +F
Sbjct: 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNF 453
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 24/219 (10%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQ-NFSEDEARNLCFQV 61
L K+N+ +V L + + + +V M LK GQ F E A ++
Sbjct: 237 ILEKVNSR-FVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPE 120
GL +HR+ +RDLKP N+L+ G I+I DLG+ + V T Y APE
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPE 355
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNS----------ADQIYKIYG-RWVA 169
V + +E D WA+G +++EM++ + F + ++ + Y R+
Sbjct: 356 V-VKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSP 414
Query: 170 LISWLCSW----NPRMR-----PTAAEALEHPFFRSCHF 199
LCS +P R +A E EHP F+ +F
Sbjct: 415 QARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNF 453
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 78/160 (48%), Gaps = 27/160 (16%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQ-----------NFSEDEARN 56
H +IVK + E + + +VF+YM+ DL K ++ ++ + +
Sbjct: 73 QHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLH 132
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY----- 110
+ Q+ G+ Y+ Q + HRDL N LV + ++KIGD GM +++ S TDY
Sbjct: 133 IAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYS----TDYYRVGG 188
Query: 111 ---VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+ RW PE ++ + E D W++G +++E+ ++
Sbjct: 189 HTMLPIRWM-PPESIMYRKFT-TESDVWSLGVVLWEIFTY 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNF-----SEDEARN-- 56
L M H +IV+ + E + +VF+YM L S G + ED A
Sbjct: 96 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL 155
Query: 57 -------LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCT 108
+ QV G+ Y+ + HRDL N LV +G V+KIGD GM ++I S T
Sbjct: 156 GLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS----T 211
Query: 109 DY--------VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
DY + RW PE +L + E D W+ G +++E+ ++
Sbjct: 212 DYYRVGGRTMLPIRWM-PPESILYRKFT-TESDVWSFGVVLWEIFTY 256
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q + + Q+ + Y
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDS---SLPCTDYVTTRWYRAPEVLL 123
+ ++ + HRDL N LV + ++K+ D G+ + + + P +W APE L
Sbjct: 129 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW-TAPESLA 187
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY-------------GRWVA 169
++ + D WA G +++E+ ++ + +PG + + Q+Y++ +
Sbjct: 188 YNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCPEKVYE 245
Query: 170 LISWLCSWNPRMRPTAAE 187
L+ WNP RP+ AE
Sbjct: 246 LMRACWQWNPSDRPSFAE 263
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 3 FLRKMNNHPN-----IVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L MN H IV L+ + +VF+ + +L L++ + + S + R
Sbjct: 84 LLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF 143
Query: 58 CFQVFQGLHYMH--RQGYFHRDLKPSNLLV---SKGVIKIGDLGMVKEIDSSLPCTDYVT 112
Q+ L ++ H DLKP N+L+ + IKI D G ++ + +
Sbjct: 144 AQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI--YQXIQ 201
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
+R+YR+PEVLL +D W++G I+ EM + LF G N DQ+ KI
Sbjct: 202 SRFYRSPEVLL-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 251
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 3 FLRKMNNHPN-----IVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L MN H IV L+ + +VF+ + +L L++ + + S + R
Sbjct: 103 LLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF 162
Query: 58 CFQVFQGLHYMH--RQGYFHRDLKPSNLLV---SKGVIKIGDLGMVKEIDSSLPCTDYVT 112
Q+ L ++ H DLKP N+L+ + IKI D G ++ + +
Sbjct: 163 AQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI--YQXIQ 220
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
+R+YR+PEVLL +D W++G I+ EM + LF G N DQ+ KI
Sbjct: 221 SRFYRSPEVLL-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 270
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 80/181 (44%), Gaps = 10/181 (5%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQ 60
I + M NH N+VK +E ++ +Y +L ++ G E +A+ Q
Sbjct: 56 ICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG--MPEPDAQRFFHQ 113
Query: 61 VFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV---KEIDSSLPCTDYVTTRWY 116
+ G+ Y+H G HRD+KP NLL+ + +KI D G+ + + T Y
Sbjct: 114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 117 RAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALISWLCS 176
APE+L E VD W+ G ++ ML+ + P +D + Y W ++L
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL--PWDQPSDSCQE-YSDWKEKKTYLNP 230
Query: 177 W 177
W
Sbjct: 231 W 231
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 71/146 (48%), Gaps = 8/146 (5%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEARNLCFQVFQGLH 66
HP++V L E ++ +++ YME+ LK + + S ++ +C +GLH
Sbjct: 94 HPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLH 153
Query: 67 YMHRQGYFHRDLKPSNLLVSKGVI-KIGDLGMVK---EIDSSLPCTDYVTTRWYRAPEVL 122
Y+H + HRD+K N+L+ + + KI D G+ K E+ + T Y PE
Sbjct: 154 YLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYF 213
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFR 148
+ + + D ++ G ++FE+L R
Sbjct: 214 IKGRLT-EKSDVYSFGVVLFEVLCAR 238
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q + + Q+ + Y
Sbjct: 68 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 127
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDS---SLPCTDYVTTRWYRAPEVLL 123
+ ++ + HRDL N LV + ++K+ D G+ + + + P +W APE L
Sbjct: 128 LEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKW-TAPESLA 186
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY-------------GRWVA 169
++ + D WA G +++E+ ++ + +PG + + Q+Y++ +
Sbjct: 187 YNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCPEKVYE 244
Query: 170 LISWLCSWNPRMRPTAAE 187
L+ WNP RP+ AE
Sbjct: 245 LMRACWQWNPSDRPSFAE 262
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 89/192 (46%), Gaps = 38/192 (19%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARN------ 56
+ ++ +H NIV L ++++F+Y DLL ++ S + FSEDE
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLR-SKREKFSEDEIEYENQKRL 160
Query: 57 --------------LCF--QVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVK 99
LCF QV +G+ ++ + HRDL N+LV+ G V+KI D G+ +
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLAR 220
Query: 100 EIDSSLPCTDYVT-------TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-F 151
+I S ++YV +W APE L I + D W+ G +++E+ S + +
Sbjct: 221 DIMSD---SNYVVRGNARLPVKW-MAPES-LFEGIYTIKSDVWSYGILLWEIFSLGVNPY 275
Query: 152 PGKNSADQIYKI 163
PG YK+
Sbjct: 276 PGIPVDANFYKL 287
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNF-----SEDEARN-- 56
L M H +IV+ + E + +VF+YM L S G + ED A
Sbjct: 73 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL 132
Query: 57 -------LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCT 108
+ QV G+ Y+ + HRDL N LV +G V+KIGD GM ++I S T
Sbjct: 133 GLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS----T 188
Query: 109 DY--------VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
DY + RW PE +L + E D W+ G +++E+ ++
Sbjct: 189 DYYRVGGRTMLPIRWM-PPESILYRKFT-TESDVWSFGVVLWEIFTY 233
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 29/167 (17%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNF-----SEDEARN-- 56
L M H +IV+ + E + +VF+YM L S G + ED A
Sbjct: 67 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL 126
Query: 57 -------LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCT 108
+ QV G+ Y+ + HRDL N LV +G V+KIGD GM ++I S T
Sbjct: 127 GLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS----T 182
Query: 109 DY--------VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
DY + RW PE +L + E D W+ G +++E+ ++
Sbjct: 183 DYYRVGGRTMLPIRWM-PPESILYRKFT-TESDVWSFGVVLWEIFTY 227
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 77/160 (48%), Gaps = 7/160 (4%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL--CFQVFQGLHY 67
HPNIV V + ++ IV +Y+ L + +G DE R L + V +G++Y
Sbjct: 93 HPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 68 MHRQG--YFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSS-LPCTDYVTTRWYRAPEVLL 123
+H + HR+LK NLLV K +K+ D G+ + S+ L T + APEV L
Sbjct: 153 LHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEV-L 211
Query: 124 LSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
E + D ++ G I++E+ + + + N A + +
Sbjct: 212 RDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAV 251
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 100/228 (43%), Gaps = 42/228 (18%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVF 62
LR+ + HPN+++ K+ + +I + + L + +++ + E L Q
Sbjct: 70 LLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGL-EPITLLQQTT 128
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVS----KGVIK--IGDLGMVKEI---------DSSLPC 107
GL ++H HRDLKP N+L+S G IK I D G+ K++ S +P
Sbjct: 129 SGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPG 188
Query: 108 TDYVTTRWYRAPEVLLLSEICGPE----VDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
T+ + APE +LSE C VD ++ G + + ++S GK+ Q +
Sbjct: 189 TE-----GWIAPE--MLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANIL 241
Query: 164 YGRWV---------------ALISWLCSWNPRMRPTAAEALEHPFFRS 196
G LI + + +P+ RP+A L+HPFF S
Sbjct: 242 LGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWS 289
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 53/240 (22%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDL--LKLMKESAGQNFSEDEAR----- 55
L + ++HPN++ R E D F+ Y+ +L L L +N S++ +
Sbjct: 79 LLTESDDHPNVI--RYYCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEY 133
Query: 56 ---NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV--------------IKIGDLGMV 98
+L Q+ G+ ++H HRDLKP N+LVS I I D G+
Sbjct: 134 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 99 KEIDSS-----LPCTDYVTTRWYRAPEVLLLS--EICGPEVDRWAMGAIMFEMLSF---- 147
K++DS + T +RAPE+L S +D ++MG + + +LS
Sbjct: 194 KKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
Query: 148 --------RILFPGKNSADQIYKIYGRWV-----ALISWLCSWNPRMRPTAAEALEHPFF 194
+ G S D++ ++ R + LIS + +P RPTA + L HP F
Sbjct: 254 FGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 102/240 (42%), Gaps = 53/240 (22%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDL--LKLMKESAGQNFSEDEAR----- 55
L + ++HPN++ R E D F+ Y+ +L L L +N S++ +
Sbjct: 79 LLTESDDHPNVI--RYYCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEY 133
Query: 56 ---NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV--------------IKIGDLGMV 98
+L Q+ G+ ++H HRDLKP N+LVS I I D G+
Sbjct: 134 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 193
Query: 99 KEIDSS-----LPCTDYVTTRWYRAPEVLLLS--EICGPEVDRWAMGAIMFEMLSF---- 147
K++DS + T +RAPE+L S +D ++MG + + +LS
Sbjct: 194 KKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
Query: 148 --------RILFPGKNSADQIYKIYGRWV-----ALISWLCSWNPRMRPTAAEALEHPFF 194
+ G S D++ ++ R + LIS + +P RPTA + L HP F
Sbjct: 254 FGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q S + Q+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TA 180
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 181 PESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 238
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAE 261
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 79/171 (46%), Gaps = 13/171 (7%)
Query: 3 FLRKMNNHPN-----IVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
L MN H IV L+ + +VF+ + +L L++ + + S + R
Sbjct: 103 LLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF 162
Query: 58 CFQVFQGLHYMH--RQGYFHRDLKPSNLLV---SKGVIKIGDLGMVKEIDSSLPCTDYVT 112
Q+ L ++ H DLKP N+L+ + IKI D G ++ + +
Sbjct: 163 AQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRI--YQXIQ 220
Query: 113 TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKI 163
+R+YR+PEVLL +D W++G I+ EM + LF G N DQ+ KI
Sbjct: 221 SRFYRSPEVLL-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKI 270
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q S + Q+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TA 180
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 181 PESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 238
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAE 261
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q S + Q+ + Y
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 125 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTFTAHAGAKFPIKW-TA 178
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 179 PESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDPS-QVYELLEKDYRMERPEGCP 236
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAE 259
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q S + Q+ + Y
Sbjct: 65 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 124
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 125 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTXTAHAGAKFPIKW-TA 178
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 179 PESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDPS-QVYELLEKDYRMERPEGCP 236
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 237 EKVYELMRACWQWNPSDRPSFAE 259
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 57/244 (23%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDL--LKLMKESAGQNFSEDEAR----- 55
L + ++HPN++ R E D F+ Y+ +L L L +N S++ +
Sbjct: 61 LLTESDDHPNVI--RYYCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEY 115
Query: 56 ---NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV--------------IKIGDLGMV 98
+L Q+ G+ ++H HRDLKP N+LVS I I D G+
Sbjct: 116 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 99 KEIDSSLPC-----TDYVTTRWYRAPEVLLLSEICGPE------VDRWAMGAIMFEMLSF 147
K++DS + T +RAPE+L S + +D ++MG + + +LS
Sbjct: 176 KKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 148 ------------RILFPGKNSADQIYKIYGRWVA-----LISWLCSWNPRMRPTAAEALE 190
+ G S D++ ++ R + LIS + +P RPTA + L
Sbjct: 236 GKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
Query: 191 HPFF 194
HP F
Sbjct: 296 HPLF 299
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 57/244 (23%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDL--LKLMKESAGQNFSEDEAR----- 55
L + ++HPN++ R E D F+ Y+ +L L L +N S++ +
Sbjct: 61 LLTESDDHPNVI--RYYCSETTDRFL---YIALELCNLNLQDLVESKNVSDENLKLQKEY 115
Query: 56 ---NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV--------------IKIGDLGMV 98
+L Q+ G+ ++H HRDLKP N+LVS I I D G+
Sbjct: 116 NPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175
Query: 99 KEIDSS-----LPCTDYVTTRWYRAPEVLLLSEICGPE------VDRWAMGAIMFEMLSF 147
K++DS + T +RAPE+L S + +D ++MG + + +LS
Sbjct: 176 KKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSK 235
Query: 148 ------------RILFPGKNSADQIYKIYGRWVA-----LISWLCSWNPRMRPTAAEALE 190
+ G S D++ ++ R + LIS + +P RPTA + L
Sbjct: 236 GKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
Query: 191 HPFF 194
HP F
Sbjct: 296 HPLF 299
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 5/142 (3%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
N P IV ++ I ++M+ L + + AG+ E + V +GL Y+
Sbjct: 65 NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR-IPEQILGKVSIAVIKGLTYL 123
Query: 69 -HRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+ HRD+KPSN+LV S+G IK+ D G+ ++ + ++V TR Y +PE L +
Sbjct: 124 REKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEM-ANEFVGTRSYMSPERLQGTH 182
Query: 127 ICGPEVDRWAMGAIMFEMLSFR 148
+ D W+MG + EM R
Sbjct: 183 YS-VQSDIWSMGLSLVEMAVGR 203
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 10 HPNIVKLRNLVKEH--EDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + E + ++ +++ S LK + + Q+ +G+ Y
Sbjct: 70 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 129
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR-----WYRAPEV 121
+ + Y HRDL N+LV S+ +KIGD G+ K I++ R WY APE
Sbjct: 130 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APEC 188
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
L+ S+ D W+ G + E+L++
Sbjct: 189 LMQSKFYIAS-DVWSFGVTLHELLTY 213
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q S + Q+ + Y
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 131
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 132 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TA 185
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 186 PESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 243
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAE 266
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 10 HPNIVKLRNLVKEH--EDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + E + ++ +++ S LK + + Q+ +G+ Y
Sbjct: 82 HENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDY 141
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR-----WYRAPEV 121
+ + Y HRDL N+LV S+ +KIGD G+ K I++ R WY APE
Sbjct: 142 LGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWY-APEC 200
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
L+ S+ D W+ G + E+L++
Sbjct: 201 LMQSKFYIAS-DVWSFGVTLHELLTY 225
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q S + Q+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TA 180
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 181 PESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 238
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAE 261
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q S + Q+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TA 180
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 181 PESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 238
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAE 261
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 92/256 (35%), Gaps = 78/256 (30%)
Query: 14 VKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQGY 73
V++ + H + IVF+ + +KE+ F D R + +Q+ + ++++H
Sbjct: 80 VQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKL 139
Query: 74 FHRDLKPSNLLVSKG--------------------VIKIGDLGMVKEIDSSLPCTDYVTT 113
H DLKP N+L + IK+ D G D + V
Sbjct: 140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH--HSTLVXX 197
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI------------- 160
R YRAPEV+L P D W++G I+ E +FP +S + +
Sbjct: 198 RHYRAPEVILALGWSQP-CDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKH 256
Query: 161 --------------------YKIYGRWVA----------------------LISWLCSWN 178
+ GR+V+ LI + ++
Sbjct: 257 MIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYD 316
Query: 179 PRMRPTAAEALEHPFF 194
P R T EAL+HPFF
Sbjct: 317 PAKRITLREALKHPFF 332
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQ 63
L + P +V L + + ++ DY+ L S + F+E E + ++
Sbjct: 112 LEHIRQSPFLVTLHYAFQTETKLHLILDYINGGEL-FTHLSQRERFTEHEVQIYVGEIVL 170
Query: 64 GLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEI--DSSLPCTDYVTTRWYRAPE 120
L ++H+ G +RD+K N+L+ S G + + D G+ KE D + D+ T Y AP+
Sbjct: 171 ALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPD 230
Query: 121 VLLLSEICGPE-VDRWAMGAIMFEMLS 146
++ + + VD W++G +M+E+L+
Sbjct: 231 IVRGGDSGHDKAVDWWSLGVLMYELLT 257
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 28/206 (13%)
Query: 8 NNHPNIVKLRNLVKEHEDVFIVFD--YMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
HP +++L + + E +V + DL + E E +R QV +
Sbjct: 95 GGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAI 152
Query: 66 HYMHRQGYFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLL 123
+ H +G HRD+K N+L+ +G K+ D G + P TD+ TR Y PE +
Sbjct: 153 QHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE-PYTDFDGTRVYSPPEWIS 211
Query: 124 LSEICGPEVDRWAMGAIMFEM-------------LSFRILFPGKNSADQIYKIYGRWVAL 170
+ W++G ++++M L + FP S D AL
Sbjct: 212 RHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDC--------CAL 263
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFRS 196
I + P RP+ E L P+ ++
Sbjct: 264 IRRCLAPKPSSRPSLEEILLDPWMQT 289
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q + + Q+ + Y
Sbjct: 72 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 132 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TA 185
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 186 PESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 243
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAE 266
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K +HPNIV+L + + + ++IV + ++ D L ++ + G + G
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR-TEGARLRVKTLLQMVGDAAAG 225
Query: 65 LHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKE----IDSSLPCTDYVTTRWYRAP 119
+ Y+ + HRDL N LV+ K V+KI D GM +E + ++ V +W AP
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKW-TAP 284
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSF 147
E L E D W+ G +++E S
Sbjct: 285 EALNYGRYSS-ESDVWSFGILLWETFSL 311
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 19/176 (10%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCF--- 59
+ + H NIV L V ++ +Y DLL ++ A + +++ R L
Sbjct: 95 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDL 154
Query: 60 -----QVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT 113
QV QG+ ++ + HRD+ N+L++ G V KIGD G+ ++I + ++Y+
Sbjct: 155 LHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMND---SNYIVK 211
Query: 114 RWYRAPEVLLLSE-----ICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKI 163
R P + E + + D W+ G +++E+ S + +PG + YK+
Sbjct: 212 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 267
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q + + Q+ + Y
Sbjct: 68 KHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 127
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 128 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTXTAHAGAKFPIKW-TA 181
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 182 PESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 239
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 240 EKVYELMRACWQWNPSDRPSFAE 262
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 28/217 (12%)
Query: 3 FLRKMNNHPNIVKL--RNLVKEHEDVFIVFDYMES-DLLKLMKESAG--QNFSEDEARNL 57
LR++ HPNIV+ R + + + ++IV +Y E DL ++ + Q E+ +
Sbjct: 58 LLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 116
Query: 58 CFQVFQGLHYMHRQG-----YFHRDLKPSNL-LVSKGVIKIGDLGMVKEI--DSSLPCTD 109
Q+ L HR+ HRDLKP+N+ L K +K+GD G+ + + D+S T
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKT- 175
Query: 110 YVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFR---ILFPGKNSADQI------ 160
+V T +Y +PE + + D W++G +++E+ + F K A +I
Sbjct: 176 FVGTPYYMSPEQMNRMSY-NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR 234
Query: 161 ---YKIYGRWVALISWLCSWNPRMRPTAAEALEHPFF 194
Y+ +I+ + + RP+ E LE+P
Sbjct: 235 RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 19/173 (10%)
Query: 7 MNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCF------ 59
+ H NIV L V ++ +Y DLL ++ A + +++ R L
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 60 --QVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTTRWY 116
QV QG+ ++ + HRD+ N+L++ G V KIGD G+ ++I + ++Y+
Sbjct: 166 SSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI---MNDSNYIVKGNA 222
Query: 117 RAPEVLLLSE-----ICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKI 163
R P + E + + D W+ G +++E+ S + +PG + YK+
Sbjct: 223 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 275
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q + + Q+ + Y
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 132 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTXTAHAGAKFPIKW-TA 185
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 186 PESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 243
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAE 266
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
K +HPNIV+L + + + ++IV + ++ D L ++ + G + G
Sbjct: 167 KQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR-TEGARLRVKTLLQMVGDAAAG 225
Query: 65 LHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKE----IDSSLPCTDYVTTRWYRAP 119
+ Y+ + HRDL N LV+ K V+KI D GM +E + ++ V +W AP
Sbjct: 226 MEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKW-TAP 284
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSF 147
E L E D W+ G +++E S
Sbjct: 285 EALNYGRYSS-ESDVWSFGILLWETFSL 311
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 9 NHPNIVKLRNLVKEHEDV----FIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
NHP IV + + + +IV +Y++ L+ + + G + A + Q
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 65 LHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEI----DSSLPCTDYVTTRWYRAP 119
L++ H+ G HRD+KP+N+L+S +K+ D G+ + I +S + T Y +P
Sbjct: 129 LNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSP 188
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYK 162
E + D +++G +++E+L+ F G + Y+
Sbjct: 189 EQARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q + + Q+ + Y
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 132 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TA 185
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 186 PESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 243
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAE 266
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q + + Q+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 126
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TA 180
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 181 PESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 238
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAE 261
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q + + Q+ + Y
Sbjct: 72 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 131
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 132 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TA 185
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 186 PESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 243
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 244 EKVYELMRACWQWNPSDRPSFAE 266
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 30/163 (18%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMK--------------ESAGQNFSEDE 53
H +IVK + + + + +VF+YM+ DL K ++ A +
Sbjct: 75 QHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQ 134
Query: 54 ARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY-- 110
++ Q+ G+ Y+ Q + HRDL N LV ++KIGD GM +++ S TDY
Sbjct: 135 MLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYS----TDYYR 190
Query: 111 ------VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+ RW PE ++ + E D W+ G I++E+ ++
Sbjct: 191 VGGHTMLPIRWM-PPESIMYRKFT-TESDVWSFGVILWEIFTY 231
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q + + Q+ + Y
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 126
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 127 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TA 180
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 181 PESLAYNKF-SIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 238
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAE 261
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q + + Q+ + Y
Sbjct: 71 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 130
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 131 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TA 184
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 185 PESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 242
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 243 EKVYELMRACWQWNPSDRPSFAE 265
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 47/240 (19%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQ 63
L + H N+++L +E + ++VF+ M + L ++F+E EA + V
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI-LSHIHKRRHFNELEASVVVQDVAS 122
Query: 64 GLHYMHRQGYFHRDLKPSNLLVSK----GVIKIGDLGMVKEIDSSLPCTDYVT------- 112
L ++H +G HRDLKP N+L +KI D G+ I + C+ T
Sbjct: 123 ALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC 182
Query: 113 -TRWYRAPEVL-LLSE---ICGPEVDRWAMGAIMFEMLSFRILFPGKNSAD--------- 158
+ Y APEV+ SE I D W++G I++ +LS F G+ +D
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 159 -------------QIYKIYGR-WV-------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
Y+ + W LIS L + + R +AA+ L+HP+ + C
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q + + Q+ + Y
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 129 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TA 182
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 183 PESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 240
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAE 263
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 9 NHPNIVKLRNLVKEHEDV----FIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
NHP IV + + + +IV +Y++ L+ + + G + A + Q
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 65 LHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEI-DSSLPCTD---YVTTRWYRAP 119
L++ H+ G HRD+KP+N+++S +K+ D G+ + I DS T + T Y +P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYK 162
E + D +++G +++E+L+ F G + Y+
Sbjct: 189 EQARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q + + Q+ + Y
Sbjct: 69 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 128
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 129 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TA 182
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 183 PESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 240
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 241 EKVYELMRACWQWNPSDRPSFAE 263
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 9 NHPNIVKLRNLVKEHEDV----FIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
NHP IV + + + +IV +Y++ L+ + + G + A + Q
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 65 LHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEI-DSSLPCTD---YVTTRWYRAP 119
L++ H+ G HRD+KP+N+++S +K+ D G+ + I DS T + T Y +P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYK 162
E + D +++G +++E+L+ F G + Y+
Sbjct: 189 EQARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +I+ ++M +LL ++E Q + + Q+ + Y
Sbjct: 80 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEY 139
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + ++K+ D G+ S L D T +W A
Sbjct: 140 LEKKNFIHRDLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TA 193
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY------------- 164
PE L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 194 PESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCP 251
Query: 165 GRWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 252 EKVYELMRACWQWNPSDRPSFAE 274
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 9 NHPNIVKLRNLVKEHEDV----FIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
NHP IV + + + +IV +Y++ L+ + + G + A + Q
Sbjct: 87 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 145
Query: 65 LHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEI-DSSLPCTD---YVTTRWYRAP 119
L++ H+ G HRD+KP+N+++S +K+ D G+ + I DS T + T Y +P
Sbjct: 146 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 205
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYK 162
E + D +++G +++E+L+ F G + Y+
Sbjct: 206 E-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 247
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 88/213 (41%), Gaps = 26/213 (12%)
Query: 2 IFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLL--KLMKESAGQNFSEDEARNLCF 59
I + K H NIV L ++ + ++V + L ++++ ++E +A +
Sbjct: 57 IAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV---YTEKDASLVIQ 113
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLV----SKGVIKIGDLGMVKEIDSSLPCTDYVTTRW 115
QV + Y+H G HRDLKP NLL I I D G+ K + + T T
Sbjct: 114 QVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTA-CGTPG 172
Query: 116 YRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVALIS--W 173
Y APEV L + VD W++G I + +L F + + KI + S W
Sbjct: 173 YVAPEV-LAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFW 231
Query: 174 -------------LCSWNPRMRPTAAEALEHPF 193
L +P R T +AL HP+
Sbjct: 232 DDISESAKDFICHLLEKDPNERYTCEKALSHPW 264
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 21/173 (12%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYME--SDLLKLMKESAGQNFSEDEARNLCFQV 61
L + + NI++L ++ ++VF+ ++ S L + K+ ++F+E EA + V
Sbjct: 64 LYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQ---KHFNEREASRVVRDV 120
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSK----GVIKIGDLGMVKEIDSSLPCTDYVT----- 112
L ++H +G HRDLKP N+L +KI D + + + CT T
Sbjct: 121 AAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTT 180
Query: 113 ---TRWYRAPEVLLL----SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSAD 158
+ Y APEV+ + + D W++G +++ MLS F G AD
Sbjct: 181 PCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGAD 233
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 9 NHPNIVKLRNLVKEHEDV----FIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
NHP IV + + + +IV +Y++ L+ + + G + A + Q
Sbjct: 70 NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 65 LHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEI-DSSLPCTD---YVTTRWYRAP 119
L++ H+ G HRD+KP+N+++S +K+ D G+ + I DS T + T Y +P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYK 162
E + D +++G +++E+L+ F G + Y+
Sbjct: 189 EQARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQ 230
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 30/167 (17%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME----SDLLKLMKESAGQNFSEDE----------- 53
++PNIVKL + + + ++F+YM ++ L+ M + S +
Sbjct: 108 DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPG 167
Query: 54 ------ARNLCF--QVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSS 104
A LC QV G+ Y+ + + HRDL N LV + V+KI D G+ + I S+
Sbjct: 168 PPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSA 227
Query: 105 ----LPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
D + RW PE + + E D WA G +++E+ S+
Sbjct: 228 DYYKADGNDAIPIRWM-PPESIFYNRYTT-ESDVWAYGVVLWEIFSY 272
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 92/202 (45%), Gaps = 32/202 (15%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN+V+L + +I+ ++M +LL ++E Q S + Q+ + Y+
Sbjct: 275 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 334
Query: 69 HRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRAP 119
++ + HR+L N LV + ++K+ D G+ S L D T +W AP
Sbjct: 335 EKKNFIHRNLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TAP 388
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY-------------G 165
E L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 389 ESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCPE 446
Query: 166 RWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 447 KVYELMRACWQWNPSDRPSFAE 468
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 3 FLRKMNNHPNIVKL--RNLVKEHEDVFIVFDYMES-DLLKLMKESAG--QNFSEDEARNL 57
LR++ HPNIV+ R + + + ++IV +Y E DL ++ + Q E+ +
Sbjct: 58 LLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 116
Query: 58 CFQVFQGLHYMHRQG-----YFHRDLKPSNL-LVSKGVIKIGDLGMVKEIDSSLP-CTDY 110
Q+ L HR+ HRDLKP+N+ L K +K+GD G+ + ++ ++
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF 176
Query: 111 VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFR---ILFPGKNSADQI------- 160
V T +Y +PE + + D W++G +++E+ + F K A +I
Sbjct: 177 VGTPYYMSPEQMNRMSY-NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR 235
Query: 161 --YKIYGRWVALISWLCSWNPRMRPTAAEALEHPFF 194
Y+ +I+ + + RP+ E LE+P
Sbjct: 236 IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 9 NHPNIVKLRNLVKEHEDV----FIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQG 64
NHP IV + + +IV +Y++ L+ + + G + A + Q
Sbjct: 70 NHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP-MTPKRAIEVIADACQA 128
Query: 65 LHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEI-DSSLPCTD---YVTTRWYRAP 119
L++ H+ G HRD+KP+N+++S +K+ D G+ + I DS T + T Y +P
Sbjct: 129 LNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSP 188
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYK 162
E + D +++G +++E+L+ F G + Y+
Sbjct: 189 EQARGDSVDA-RSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 100/217 (46%), Gaps = 28/217 (12%)
Query: 3 FLRKMNNHPNIVKL--RNLVKEHEDVFIVFDYMES-DLLKLMKESAG--QNFSEDEARNL 57
LR++ HPNIV+ R + + + ++IV +Y E DL ++ + Q E+ +
Sbjct: 58 LLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRV 116
Query: 58 CFQVFQGLHYMHRQG-----YFHRDLKPSNL-LVSKGVIKIGDLGMVKEI--DSSLPCTD 109
Q+ L HR+ HRDLKP+N+ L K +K+GD G+ + + D+S
Sbjct: 117 MTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF-AKA 175
Query: 110 YVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFR---ILFPGKNSADQI------ 160
+V T +Y +PE + + D W++G +++E+ + F K A +I
Sbjct: 176 FVGTPYYMSPEQMNRMSY-NEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFR 234
Query: 161 ---YKIYGRWVALISWLCSWNPRMRPTAAEALEHPFF 194
Y+ +I+ + + RP+ E LE+P
Sbjct: 235 RIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEI---DSSLPCTDYV 111
++ Q +G+ Y+H + HRDLK +N+ + + +KIGD G+ E S
Sbjct: 124 DIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 112 TTRWYRAPEVLLLSEICGP---EVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR 166
+ + APEV+ + + P + D +A G +++E+++ ++ + N+ DQI ++ GR
Sbjct: 184 GSILWMAPEVIRMQD-SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 23/186 (12%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDY-MESDLLK--LMKESAGQNFSEDEAR----- 55
LR HPN+V L +V + + + ++F Y DL + +M+ S D+ R
Sbjct: 82 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 141
Query: 56 -------NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSS--- 104
+L Q+ G+ Y+ H+DL N+LV K +KI DLG+ +E+ ++
Sbjct: 142 LEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY 201
Query: 105 -LPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYK 162
L + RW APE ++ + + D W+ G +++E+ S+ + + G ++ D +
Sbjct: 202 KLLGNSLLPIRWM-APEAIMYGKF-SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM 259
Query: 163 IYGRWV 168
I R V
Sbjct: 260 IRNRQV 265
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEI---DSSLPCTDYV 111
++ Q +G+ Y+H + HRDLK +N+ + + +KIGD G+ E S
Sbjct: 124 DIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 112 TTRWYRAPEVLLLSEICGP---EVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR 166
+ + APEV+ + + P + D +A G +++E+++ ++ + N+ DQI ++ GR
Sbjct: 184 GSILWMAPEVIRMQD-SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGR 240
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 90/203 (44%), Gaps = 32/203 (15%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
HPN+V+L + +IV +YM +LL ++E + + + Q+ + Y
Sbjct: 86 KHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEY 145
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRA 118
+ ++ + HRDL N LV + V+K+ D G+ S L D T +W A
Sbjct: 146 LEKKNFIHRDLAARNCLVGENHVVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TA 199
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIYGRW---------- 167
PE L + + D WA G +++E+ ++ + +PG + + Q+Y + +
Sbjct: 200 PESLAYNTFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYDLLEKGYRMEQPEGCP 257
Query: 168 ---VALISWLCSWNPRMRPTAAE 187
L+ W+P RP+ AE
Sbjct: 258 PKVYELMRACWKWSPADRPSFAE 280
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 21/191 (10%)
Query: 25 DVFIVFDYMESDLLKLMKE--SAGQNFSEDEARNLCFQVFQGLHYMHRQ-GYFHRDLKPS 81
DV+I + ++ L K K+ GQ ED + + + L ++H + HRD+KPS
Sbjct: 107 DVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPS 166
Query: 82 NLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVL---LLSEICGPEVDRWAM 137
N+L++ G +K D G+ + + + Y APE + L + + D W++
Sbjct: 167 NVLINALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSL 226
Query: 138 GAIMFEMLSFRILFPGKNSADQ--------------IYKIYGRWVALISWLCSWNPRMRP 183
G E+ R + + Q K +V S N + RP
Sbjct: 227 GITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERP 286
Query: 184 TAAEALEHPFF 194
T E +HPFF
Sbjct: 287 TYPELXQHPFF 297
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 88/186 (47%), Gaps = 23/186 (12%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDY-MESDLLK--LMKESAGQNFSEDEAR----- 55
LR HPN+V L +V + + + ++F Y DL + +M+ S D+ R
Sbjct: 65 LRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124
Query: 56 -------NLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSS--- 104
+L Q+ G+ Y+ H+DL N+LV K +KI DLG+ +E+ ++
Sbjct: 125 LEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY 184
Query: 105 -LPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYK 162
L + RW APE ++ + + D W+ G +++E+ S+ + + G ++ D +
Sbjct: 185 KLLGNSLLPIRWM-APEAIMYGKF-SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEM 242
Query: 163 IYGRWV 168
I R V
Sbjct: 243 IRNRQV 248
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 23/158 (14%)
Query: 23 HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSN 82
H + I F+ + + + +KE+ Q + R++ +Q+ L ++H H DLKP N
Sbjct: 94 HGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPEN 153
Query: 83 LL--------------------VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVL 122
+L V I++ D G D T V TR YR PEV+
Sbjct: 154 ILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT-FDHEHHTT-IVATRHYRPPEVI 211
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
L P D W++G I+FE LF + + +
Sbjct: 212 LELGWAQP-CDVWSIGCILFEYYRGFTLFQTHENREHL 248
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 92/202 (45%), Gaps = 32/202 (15%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN+V+L + +I+ ++M +LL ++E Q + + Q+ + Y+
Sbjct: 272 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 331
Query: 69 HRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTT--------RWYRAP 119
++ + HR+L N LV + ++K+ D G+ S L D T +W AP
Sbjct: 332 EKKNFIHRNLAARNCLVGENHLVKVADFGL-----SRLMTGDTYTAHAGAKFPIKW-TAP 385
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY-------------G 165
E L ++ + D WA G +++E+ ++ + +PG + + Q+Y++
Sbjct: 386 ESLAYNKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCPE 443
Query: 166 RWVALISWLCSWNPRMRPTAAE 187
+ L+ WNP RP+ AE
Sbjct: 444 KVYELMRACWQWNPSDRPSFAE 465
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 89/205 (43%), Gaps = 21/205 (10%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
H NI+ L + E++ ++F+++ D+ + + SA + +E E + QV + L ++
Sbjct: 60 HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFE-LNEREIVSYVHQVCEALQFL 118
Query: 69 HRQGYFHRDLKPSNLLVS---KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLS 125
H H D++P N++ IKI + G +++ T Y APEV
Sbjct: 119 HSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEV-HQH 177
Query: 126 EICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG---------------RWVAL 170
++ D W++G +++ +LS F + + I I +
Sbjct: 178 DVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDF 237
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFR 195
+ L + R TA+EAL+HP+ +
Sbjct: 238 VDRLLVKERKSRMTASEALQHPWLK 262
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 23/158 (14%)
Query: 23 HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSN 82
H + I F+ + + + +KE+ Q + R++ +Q+ L ++H H DLKP N
Sbjct: 103 HGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPEN 162
Query: 83 LL--------------------VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVL 122
+L V I++ D G D T V TR YR PEV+
Sbjct: 163 ILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT-FDHEHHTT-IVATRHYRPPEVI 220
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
L P D W++G I+FE LF + + +
Sbjct: 221 LELGWAQP-CDVWSIGCILFEYYRGFTLFQTHENREHL 257
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 93/197 (47%), Gaps = 22/197 (11%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYME-SDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
HPN+V+L + +I+ ++M +LL ++E Q + + Q+ + Y+
Sbjct: 314 HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL 373
Query: 69 HRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTTRW---YRAPEVLLL 124
++ + HR+L N LV + ++K+ D G+ + + T + ++ + APE L
Sbjct: 374 EKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAY 432
Query: 125 SEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIY-------------GRWVAL 170
++ + D WA G +++E+ ++ + +PG + + Q+Y++ + L
Sbjct: 433 NKFS-IKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYELLEKDYRMERPEGCPEKVYEL 490
Query: 171 ISWLCSWNPRMRPTAAE 187
+ WNP RP+ AE
Sbjct: 491 MRACWQWNPSDRPSFAE 507
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYV 111
++ Q QG+ Y+H + HRDLK +N+ + + + +KIGD G+ E S
Sbjct: 128 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 187
Query: 112 TTRWYRAPEVLLLSEICGP---EVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR 166
+ + APEV+ + + P + D +A G +++E+++ ++ + N+ DQI + GR
Sbjct: 188 GSILWMAPEVIRMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 244
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYV 111
++ Q QG+ Y+H + HRDLK +N+ + + + +KIGD G+ E S
Sbjct: 136 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 195
Query: 112 TTRWYRAPEVLLLSEICGP---EVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR 166
+ + APEV+ + + P + D +A G +++E+++ ++ + N+ DQI + GR
Sbjct: 196 GSILWMAPEVIRMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 252
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 65/158 (41%), Gaps = 23/158 (14%)
Query: 23 HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSN 82
H + I F+ + + + +KE+ Q + R++ +Q+ L ++H H DLKP N
Sbjct: 126 HGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPEN 185
Query: 83 LL--------------------VSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVL 122
+L V I++ D G D T V TR YR PEV+
Sbjct: 186 ILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSAT-FDHEHHTT-IVATRHYRPPEVI 243
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
L P D W++G I+FE LF + + +
Sbjct: 244 LELGWAQP-CDVWSIGCILFEYYRGFTLFQTHENREHL 280
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 8/118 (6%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEI---DSSLPCTDYV 111
++ Q QG+ Y+H + HRDLK +N+ + + + +KIGD G+ E S
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 167
Query: 112 TTRWYRAPEVLLLSEICGP---EVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGR 166
+ + APEV+ + + P + D +A G +++E+++ ++ + N+ DQI + GR
Sbjct: 168 GSILWMAPEVIRMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGR 224
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 79/166 (47%), Gaps = 20/166 (12%)
Query: 23 HEDVFIVFDYMESDLLKLMKE-----SAGQNFSEDEARNLCFQVF-------QGLHYMHR 70
H ++ + YM D L ++ + S ++ E + FQ+ QG+ Y+H
Sbjct: 91 HVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA 150
Query: 71 QGYFHRDLKPSNLLVSKGV-IKIGDLGMV---KEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
+ HRD+K +N+ + +G+ +KIGD G+ S + + APEV+ + +
Sbjct: 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 127 ICGP---EVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYGRWVA 169
P + D ++ G +++E+++ + + N+ DQI + GR A
Sbjct: 211 -NNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYA 255
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 64/129 (49%), Gaps = 30/129 (23%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTR 114
++ Q +G+ Y+H + HRDLK +N+ + + +KIGD G+ V +R
Sbjct: 112 DIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLAT-----------VKSR 160
Query: 115 W--------------YRAPEVLLLSEICGP---EVDRWAMGAIMFEMLSFRILFPGKNSA 157
W + APEV+ + + P + D +A G +++E+++ ++ + N+
Sbjct: 161 WSGSHQFEQLSGSILWMAPEVIRMQD-SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 219
Query: 158 DQIYKIYGR 166
DQI ++ GR
Sbjct: 220 DQIIEMVGR 228
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 100/240 (41%), Gaps = 47/240 (19%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQ 63
L + H N+++L +E + ++VF+ M + L ++F+E EA + V
Sbjct: 64 LYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGSI-LSHIHKRRHFNELEASVVVQDVAS 122
Query: 64 GLHYMHRQGYFHRDLKPSNLLVSK----GVIKIGDLGMVKEIDSSLPCTDYVT------- 112
L ++H +G HRDLKP N+L +KI D + I + C+ T
Sbjct: 123 ALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC 182
Query: 113 -TRWYRAPEVLLL----SEICGPEVDRWAMGAIMFEMLSFRILFPGKNSAD--------- 158
+ Y APEV+ + I D W++G I++ +LS F G+ +D
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEAC 242
Query: 159 -------------QIYKIYGR-WV-------ALISWLCSWNPRMRPTAAEALEHPFFRSC 197
Y+ + W LIS L + + R +AA+ L+HP+ + C
Sbjct: 243 PACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 27/223 (12%)
Query: 11 PNIVKLRNLVKEHEDVFIVFDYMESDLLKLMK---ESAGQNFSEDEARNLCFQVFQGLHY 67
P IV+ + D +I + M + K K E+ + + L++
Sbjct: 81 PYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 68 MHRQ-GYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLS 125
+ HRD+KPSN+L+ + G IK+ D G+ ++ S+ T R Y APE + S
Sbjct: 141 LKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPS 200
Query: 126 EI-CGPEV--DRWAMGAIMFEMLSFRILFPGKNSA-DQIYKIYG---------------- 165
G +V D W++G ++E+ + R +P NS DQ+ ++
Sbjct: 201 ASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSP 260
Query: 166 RWVALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLC 208
++ ++ + + RP E L+HPF + R+V + C
Sbjct: 261 SFINFVNLCLTKDESKRPKYKELLKHPFI--LMYEERAVEVAC 301
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 66/145 (45%), Gaps = 12/145 (8%)
Query: 11 PNIVKLRNLVKEHEDVFIVFDYMESDLL-KLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
P IV L V+E V I + +E L +L+KE ED A Q +GL Y+H
Sbjct: 145 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEYLH 202
Query: 70 RQGYFHRDLKPSNLLVSKGV--IKIGDLGMV-----KEIDSSLPCTDYV-TTRWYRAPEV 121
+ H D+K N+L+S + D G + SL DY+ T + APEV
Sbjct: 203 SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEV 262
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLS 146
+L C +VD W+ +M ML+
Sbjct: 263 -VLGRSCDAKVDVWSSCCMMLHMLN 286
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 92/201 (45%), Gaps = 17/201 (8%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
+HPNI++L N + ++++ +Y +L K +++S F E + ++ L Y
Sbjct: 81 HHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSC--TFDEQRTATIMEELADALMY 138
Query: 68 MHRQGYFHRDLKPSN-LLVSKGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSE 126
H + HRD+KP N LL KG +KI D G SL T Y PE ++
Sbjct: 139 CHGKKVIHRDIKPENLLLGLKGELKIADFGWSVHA-PSLRRKTMCGTLDYLPPE-MIEGR 196
Query: 127 ICGPEVDRWAMGAIMFEMLSFRILFPGKNSAD---QIYKIYGRWVA--------LISWLC 175
+ +VD W +G + +E+L F + + +I K+ ++ A LIS L
Sbjct: 197 MHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKVDLKFPASVPTGAQDLISKLL 256
Query: 176 SWNPRMRPTAAEALEHPFFRS 196
NP R A+ HP+ R+
Sbjct: 257 RHNPSERLPLAQVSAHPWVRA 277
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 30/171 (17%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEAR-- 55
M ++ + H NI+ L + ++++ +Y L+ + G +S D R
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 56 ----------NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSS 104
+ +Q+ +G+ Y+ Q HRDL N+LV++ V+KI D G+ ++I++
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN- 255
Query: 105 LPCTDY--------VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
DY + +W APE L + + D W+ G +M+E+ +
Sbjct: 256 ---IDYYKKTTNGRLPVKWM-APEA-LFDRVYTHQSDVWSFGVLMWEIFTL 301
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 30/129 (23%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTR 114
++ Q QG+ Y+H + HRDLK +N+ + + + +KIGD G+ V +R
Sbjct: 135 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-----------VKSR 183
Query: 115 W--------------YRAPEVLLLSEICGP---EVDRWAMGAIMFEMLSFRILFPGKNSA 157
W + APEV+ + + P + D +A G +++E+++ ++ + N+
Sbjct: 184 WSGSHQFEQLSGSILWMAPEVIRMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 242
Query: 158 DQIYKIYGR 166
DQI + GR
Sbjct: 243 DQIIFMVGR 251
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 30/129 (23%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTR 114
++ Q QG+ Y+H + HRDLK +N+ + + + +KIGD G+ V +R
Sbjct: 110 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-----------VKSR 158
Query: 115 W--------------YRAPEVLLLSEICGP---EVDRWAMGAIMFEMLSFRILFPGKNSA 157
W + APEV+ + + P + D +A G +++E+++ ++ + N+
Sbjct: 159 WSGSHQFEQLSGSILWMAPEVIRMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 217
Query: 158 DQIYKIYGR 166
DQI + GR
Sbjct: 218 DQIIFMVGR 226
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 30/129 (23%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTR 114
++ Q QG+ Y+H + HRDLK +N+ + + + +KIGD G+ V +R
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-----------VKSR 161
Query: 115 W--------------YRAPEVLLLSEICGP---EVDRWAMGAIMFEMLSFRILFPGKNSA 157
W + APEV+ + + P + D +A G +++E+++ ++ + N+
Sbjct: 162 WSGSHQFEQLSGSILWMAPEVIRMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
Query: 158 DQIYKIYGR 166
DQI + GR
Sbjct: 221 DQIIFMVGR 229
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 30/129 (23%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTR 114
++ Q QG+ Y+H + HRDLK +N+ + + + +KIGD G+ V +R
Sbjct: 136 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-----------VKSR 184
Query: 115 W--------------YRAPEVLLLSEICGP---EVDRWAMGAIMFEMLSFRILFPGKNSA 157
W + APEV+ + + P + D +A G +++E+++ ++ + N+
Sbjct: 185 WSGSHQFEQLSGSILWMAPEVIRMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 243
Query: 158 DQIYKIYGR 166
DQI + GR
Sbjct: 244 DQIIFMVGR 252
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 30/129 (23%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTR 114
++ Q QG+ Y+H + HRDLK +N+ + + + +KIGD G+ V +R
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-----------VKSR 156
Query: 115 W--------------YRAPEVLLLSEICGP---EVDRWAMGAIMFEMLSFRILFPGKNSA 157
W + APEV+ + + P + D +A G +++E+++ ++ + N+
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 158 DQIYKIYGR 166
DQI + GR
Sbjct: 216 DQIIFMVGR 224
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 94/219 (42%), Gaps = 38/219 (17%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
K ++ P IV+ + DVFI + M + KL K G E + + + L
Sbjct: 79 KSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGP-IPERILGKMTVAIVKAL 137
Query: 66 HYM-HRQGYFHRDLKPSNLLVS-KGVIKIGDLGMV------KEIDSSLPCTDYVTTRWYR 117
+Y+ + G HRD+KPSN+L+ +G IK+ D G+ K D S C Y+
Sbjct: 138 YYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYM------ 191
Query: 118 APEVLLLSEICGPE----VDRWAMGAIMFEMLSFRILFPGKNSA---DQIYKIY------ 164
APE + + P+ D W++G + E+ + + FP KN + + K+
Sbjct: 192 APERIDPPDPTKPDYDIRADVWSLGISLVELATGQ--FPYKNCKTDFEVLTKVLQEEPPL 249
Query: 165 --------GRWVALISWLCSWNPRMRPTAAEALEHPFFR 195
G + + + + + R RP + LEH F +
Sbjct: 250 LPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 30/129 (23%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTR 114
++ Q QG+ Y+H + HRDLK +N+ + + + +KIGD G+ V +R
Sbjct: 113 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-----------VKSR 161
Query: 115 W--------------YRAPEVLLLSEICGP---EVDRWAMGAIMFEMLSFRILFPGKNSA 157
W + APEV+ + + P + D +A G +++E+++ ++ + N+
Sbjct: 162 WSGSHQFEQLSGSILWMAPEVIRMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 220
Query: 158 DQIYKIYGR 166
DQI + GR
Sbjct: 221 DQIIFMVGR 229
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 30/171 (17%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEAR-- 55
M ++ + H NI+ L + ++++ +Y L+ + G +S D R
Sbjct: 78 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 137
Query: 56 ----------NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSS 104
+ +Q+ +G+ Y+ Q HRDL N+LV++ V+KI D G+ ++I++
Sbjct: 138 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINN- 196
Query: 105 LPCTDY--------VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
DY + +W APE L + + D W+ G +M+E+ +
Sbjct: 197 ---IDYYKKTTNGRLPVKWM-APEA-LFDRVYTHQSDVWSFGVLMWEIFTL 242
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 30/171 (17%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEAR-- 55
M ++ + H NI+ L + ++++ +Y L+ + G +S D R
Sbjct: 80 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 139
Query: 56 ----------NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSS 104
+ +Q+ +G+ Y+ Q HRDL N+LV++ V+KI D G+ ++I++
Sbjct: 140 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN- 198
Query: 105 LPCTDY--------VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
DY + +W APE L + + D W+ G +M+E+ +
Sbjct: 199 ---IDYYKKTTNGRLPVKWM-APEA-LFDRVYTHQSDVWSFGVLMWEIFTL 244
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 30/129 (23%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGV-IKIGDLGMVKEIDSSLPCTDYVTTR 114
++ Q QG+ Y+H + HRDLK +N+ + + + +KIGD G+ V +R
Sbjct: 108 DIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT-----------VKSR 156
Query: 115 W--------------YRAPEVLLLSEICGP---EVDRWAMGAIMFEMLSFRILFPGKNSA 157
W + APEV+ + + P + D +A G +++E+++ ++ + N+
Sbjct: 157 WSGSHQFEQLSGSILWMAPEVIRMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR 215
Query: 158 DQIYKIYGR 166
DQI + GR
Sbjct: 216 DQIIFMVGR 224
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 30/171 (17%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEAR-- 55
M ++ + H NI+ L + ++++ +Y L+ + G +S D R
Sbjct: 83 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 142
Query: 56 ----------NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSS 104
+ +Q+ +G+ Y+ Q HRDL N+LV++ V+KI D G+ ++I++
Sbjct: 143 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN- 201
Query: 105 LPCTDY--------VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
DY + +W APE L + + D W+ G +M+E+ +
Sbjct: 202 ---IDYYKKTTNGRLPVKWM-APEA-LFDRVYTHQSDVWSFGVLMWEIFTL 247
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 100/263 (38%), Gaps = 51/263 (19%)
Query: 12 NIVKLRNLVKEHEDVFIVFDYMESD-LLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHR 70
N++ ++ ++++ V I Y+E + L ++ + S E R +F+ L +H+
Sbjct: 81 NVMGVKYCFRKNDHVVIAMPYLEHESFLDIL-----NSLSFQEVREYMLNLFKALKRIHQ 135
Query: 71 QGYFHRDLKPSNLLVSKGVIKIG--DLGMVKEI-DSSLPCTDYVT--------------- 112
G HRD+KPSN L ++ + K D G+ + D+ + +V
Sbjct: 136 FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSI 195
Query: 113 -------------TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQ 159
T +RAPEVL +D W+ G I +LS R F
Sbjct: 196 CLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF-------- 247
Query: 160 IYKIYGRWVALISWLCSWNPRMRPTAAEALEHPFFRSCHFVPRSVPLLCNNFEAV--AFP 217
YK AL + R AA+ S + + LC + + P
Sbjct: 248 -YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTP 306
Query: 218 TATVTMQGRSLT---YSQVPNDG 237
T +QG + +++VP++
Sbjct: 307 KLTSDIQGHATNLEGWNEVPDEA 329
Score = 28.5 bits (62), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/18 (66%), Positives = 13/18 (72%)
Query: 178 NPRMRPTAAEALEHPFFR 195
NP R TA EAL HPFF+
Sbjct: 340 NPASRITAEEALLHPFFK 357
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEAR-- 55
M ++ + H NI+ L + ++++ +Y L+ + G +S D R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 56 ----------NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE---I 101
+ +Q+ +G+ Y+ Q HRDL N+LV++ V+KI D G+ ++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 102 DSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
D T+ + APE L + + D W+ G +M+E+ +
Sbjct: 211 DXXKKTTNGRLPVKWMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 20/166 (12%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEARN- 56
M ++ + H NI+ L + ++++ +Y L+ +E G +S + + N
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNP 143
Query: 57 -----------LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE---I 101
+QV +G+ Y+ + HRDL N+LV++ V+KI D G+ ++ I
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 102 DSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
D T+ + APE L I + D W+ G +++E+ +
Sbjct: 204 DYYKKTTNGRLPVKWMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 43/225 (19%)
Query: 12 NIVKLRNLVKEHEDVFIVFDYM-ESDL---LKLMKESAGQNFSE-----DEARNLCFQVF 62
++V+L +V + + +V + M DL L+ ++ A N E + ++
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY--------VTT 113
G+ Y++ + + HRDL N +V+ +KIGD GM ++I TDY +
Sbjct: 140 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE----TDYYRKGGKGLLPV 195
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY--------- 164
RW APE L + D W+ G +++E+ S S +Q+ K
Sbjct: 196 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 253
Query: 165 ----GRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
R L+ +NP+MRPT E + HP F F
Sbjct: 254 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 298
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEAR-- 55
M ++ + H NI+ L + ++++ +Y L+ + G +S D R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 56 ----------NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDS- 103
+ +Q+ +G+ Y+ Q HRDL N+LV++ V+KI D G+ ++I++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 104 ---SLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+ +W APE L + + D W+ G +M+E+ +
Sbjct: 211 DYYKKTTNGRLPVKWM-APEA-LFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 30/171 (17%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEAR-- 55
M ++ + H NI+ L + ++++ +Y L+ + G +S D R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 56 ----------NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSS 104
+ +Q+ +G+ Y+ Q HRDL N+LV++ V+KI D G+ ++I++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINN- 209
Query: 105 LPCTDY--------VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
DY + +W APE L + + D W+ G +M+E+ +
Sbjct: 210 ---IDYYKNTTNGRLPVKWM-APEA-LFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
+ P IV L V+E V I + +E L + + G ED A Q +GL Y+
Sbjct: 108 SSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYL 166
Query: 69 HRQGYFHRDLKPSNLLVSKGVIKIG--DLGMV-----KEIDSSLPCTDYV-TTRWYRAPE 120
H + H D+K N+L+S + D G + SL DY+ T + APE
Sbjct: 167 HTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 226
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLS 146
V ++ + C +VD W+ +M ML+
Sbjct: 227 V-VMGKPCDAKVDIWSSCCMMLHMLN 251
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEAR-- 55
M ++ + H NI+ L + ++++ +Y L+ + G +S D R
Sbjct: 91 MEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 56 ----------NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDS- 103
+ +Q+ +G+ Y+ Q HRDL N+LV++ V+KI D G+ ++I++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 104 ---SLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+ +W APE L + + D W+ G +M+E+ +
Sbjct: 211 DYYKKTTNGRLPVKWM-APEA-LFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 43/225 (19%)
Query: 12 NIVKLRNLVKEHEDVFIVFDYM-ESDL---LKLMKESAGQNFSE-----DEARNLCFQVF 62
++V+L +V + + +V + M DL L+ ++ A N E + ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY--------VTT 113
G+ Y++ + + HRDL N +V+ +KIGD GM ++I TDY +
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE----TDYYRKGGKGLLPV 196
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY--------- 164
RW APE L + D W+ G +++E+ S S +Q+ K
Sbjct: 197 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 254
Query: 165 ----GRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
R L+ +NP+MRPT E + HP F F
Sbjct: 255 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 10/144 (6%)
Query: 11 PNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHR 70
P IV L V+E V I + +E L + + G ED A Q +GL Y+H
Sbjct: 124 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHT 182
Query: 71 QGYFHRDLKPSNLLVSKGVIKIG--DLGMV-----KEIDSSLPCTDYV-TTRWYRAPEVL 122
+ H D+K N+L+S + D G + SL DY+ T + APEV
Sbjct: 183 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV- 241
Query: 123 LLSEICGPEVDRWAMGAIMFEMLS 146
++ + C +VD W+ +M ML+
Sbjct: 242 VMGKPCDAKVDIWSSCCMMLHMLN 265
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 65/144 (45%), Gaps = 10/144 (6%)
Query: 11 PNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHR 70
P IV L V+E V I + +E L + + G ED A Q +GL Y+H
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMG-CLPEDRALYYLGQALEGLEYLHT 184
Query: 71 QGYFHRDLKPSNLLVSKGVIKIG--DLGMV-----KEIDSSLPCTDYV-TTRWYRAPEVL 122
+ H D+K N+L+S + D G + SL DY+ T + APEV
Sbjct: 185 RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEV- 243
Query: 123 LLSEICGPEVDRWAMGAIMFEMLS 146
++ + C +VD W+ +M ML+
Sbjct: 244 VMGKPCDAKVDIWSSCCMMLHMLN 267
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEAR-- 55
M ++ + H NI+ L + ++++ +Y L+ + G +S D R
Sbjct: 91 MEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 56 ----------NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDS- 103
+ +Q+ +G+ Y+ Q HRDL N+LV++ V+KI D G+ ++I++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 104 ---SLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+ +W APE L + + D W+ G +M+E+ +
Sbjct: 211 DYYKKTTNGRLPVKWM-APEA-LFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 65/145 (44%), Gaps = 12/145 (8%)
Query: 11 PNIVKLRNLVKEHEDVFIVFDYMESDLL-KLMKESAGQNFSEDEARNLCFQVFQGLHYMH 69
P IV L V+E V I + +E L +L+KE ED A Q +GL Y+H
Sbjct: 126 PRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQG--CLPEDRALYYLGQALEGLEYLH 183
Query: 70 RQGYFHRDLKPSNLLVSKGV--IKIGDLGMV-----KEIDSSLPCTDYV-TTRWYRAPEV 121
+ H D+K N+L+S + D G + L DY+ T + APEV
Sbjct: 184 SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEV 243
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLS 146
+L C +VD W+ +M ML+
Sbjct: 244 -VLGRSCDAKVDVWSSCCMMLHMLN 267
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 38/181 (20%)
Query: 49 FSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGVI------------------ 90
F E E ++L QV +GL Y+H H D+KPSN+ +S+ I
Sbjct: 108 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 167
Query: 91 --KIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFR 148
KIGDLG V I S P + +R+ A EVL + P+ D +A+ +
Sbjct: 168 MFKIGDLGHVTRISS--PQVEEGDSRFL-ANEVLQENYTHLPKADIFALALTVVXAAGAE 224
Query: 149 ILFPGKNSADQIYKI-YGR-----------WVALISWLCSWNPRMRPTAAEALEHPFFRS 196
P + DQ ++I GR + L+ + +P RP+A ++H S
Sbjct: 225 ---PLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 281
Query: 197 C 197
Sbjct: 282 A 282
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKES------------AGQNFS 50
+ + H NIV L V ++ +Y DLL ++ A S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLS 162
Query: 51 EDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTD 109
+ + QV QG+ ++ + HRD+ N+L++ G V KIGD G+ ++I + ++
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI---MNDSN 219
Query: 110 YVTTRWYRAPEVLLLSE-----ICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKI 163
Y+ R P + E + + D W+ G +++E+ S + +PG + YK+
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEARN- 56
M ++ + H NI+ L + ++++ +Y L+ + G FS + + N
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNP 143
Query: 57 -----------LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE---I 101
+QV +G+ Y+ + HRDL N+LV++ V+KI D G+ ++ I
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 102 DSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
D T+ + APE L I + D W+ G +++E+ +
Sbjct: 204 DXXKKTTNGRLPVKWMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEAR-- 55
M ++ + H NI+ L + ++++ Y L+ + G +S D R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 56 ----------NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDS- 103
+ +Q+ +G+ Y+ Q HRDL N+LV++ V+KI D G+ ++I++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 104 ---SLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+ +W APE L + + D W+ G +M+E+ +
Sbjct: 211 DYYKKTTNGRLPVKWM-APEA-LFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 87/205 (42%), Gaps = 22/205 (10%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDL----LKLMKESAGQNFSEDEARNLCFQV 61
K+ HP V+L +E + Y++++L L+ E+ G + E +
Sbjct: 112 KVGQHPCCVRLEQAWEEGGIL-----YLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDT 166
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPE 120
L ++H QG H D+KP+N+ + +G K+GD G++ E+ ++ Y APE
Sbjct: 167 LLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPE 226
Query: 121 VLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY----------GRWVAL 170
LL G D +++G + E+ L G Q+ + Y ++
Sbjct: 227 --LLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSV 284
Query: 171 ISWLCSWNPRMRPTAAEALEHPFFR 195
+ + +P++R TA L P R
Sbjct: 285 LVMMLEPDPKLRATAEALLALPVLR 309
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 22/167 (13%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEAR-- 55
M ++ + H NI+ L + ++++ +Y L+ + G +S D R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 56 ----------NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDS- 103
+ +Q+ +G+ Y+ Q HRDL N+LV++ V++I D G+ ++I++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNI 210
Query: 104 ---SLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+ +W APE L + + D W+ G +M+E+ +
Sbjct: 211 DYYKKTTNGRLPVKWM-APEA-LFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 35/221 (15%)
Query: 12 NIVKLRNLVKEHEDVFIVFDYM-ESDL---LKLMKESAGQNFSE-----DEARNLCFQVF 62
++V+L +V + + +V + M DL L+ ++ A N E + ++
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSS----LPCTDYVTTRWYR 117
G+ Y++ + + HRDL N +V+ +KIGD GM ++I + + RW
Sbjct: 138 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM- 196
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY------------- 164
APE L + D W+ G +++E+ S S +Q+ K
Sbjct: 197 APES-LKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 255
Query: 165 GRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
R L+ +NP+MRPT E + HP F F
Sbjct: 256 ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 296
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 74/167 (44%), Gaps = 22/167 (13%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEAR-- 55
M ++ + H NI+ L + ++++ Y L+ + G +S D R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 56 ----------NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDS- 103
+ +Q+ +G+ Y+ Q HRDL N+LV++ V+KI D G+ ++I++
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 104 ---SLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+ +W APE L + + D W+ G +M+E+ +
Sbjct: 211 DYYKKTTNGRLPVKWM-APEA-LFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLM--KESAGQNFSEDEARN---- 56
+ + H NIV L V ++ +Y DLL + K G +S + + N
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQ 162
Query: 57 --------LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPC 107
QV QG+ ++ + HRD+ N+L++ G V KIGD G+ ++I +
Sbjct: 163 LSSRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI---MND 219
Query: 108 TDYVTTRWYRAPEVLLLSE-----ICGPEVDRWAMGAIMFEMLSFRI-LFPGKNSADQIY 161
++Y+ R P + E + + D W+ G +++E+ S + +PG + Y
Sbjct: 220 SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFY 279
Query: 162 KI 163
K+
Sbjct: 280 KL 281
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 35/221 (15%)
Query: 12 NIVKLRNLVKEHEDVFIVFDYM-ESDL---LKLMKESAGQNFSE-----DEARNLCFQVF 62
++V+L +V + + +V + M DL L+ ++ A N E + ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSS----LPCTDYVTTRWYR 117
G+ Y++ + + HRDL N +V+ +KIGD GM ++I + + RW
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM- 199
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY------------- 164
APE L + D W+ G +++E+ S S +Q+ K
Sbjct: 200 APES-LKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 258
Query: 165 GRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
R L+ +NP+MRPT E + HP F F
Sbjct: 259 ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 78/180 (43%), Gaps = 23/180 (12%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKES------------AGQNFS 50
+ + H NIV L V ++ +Y DLL ++ A S
Sbjct: 103 MSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS 162
Query: 51 EDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTD 109
+ + QV QG+ ++ + HRD+ N+L++ G V KIGD G+ ++I + ++
Sbjct: 163 TRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI---MNDSN 219
Query: 110 YVTTRWYRAPEVLLLSE-----ICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKI 163
Y+ R P + E + + D W+ G +++E+ S + +PG + YK+
Sbjct: 220 YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL 279
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEAR-- 55
M ++ + H NI+ L + ++++ +Y L+ + G S D R
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVP 150
Query: 56 ----------NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE---I 101
+ +Q+ +G+ Y+ Q HRDL N+LV++ V+KI D G+ ++ I
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI 210
Query: 102 DSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
D T+ + APE L + + D W+ G +M+E+ +
Sbjct: 211 DXXKKTTNGRLPVKWMAPEA-LFDRVYTHQSDVWSFGVLMWEIFTL 255
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 91/221 (41%), Gaps = 35/221 (15%)
Query: 12 NIVKLRNLVKEHEDVFIVFDYM-ESDL---LKLMKESAGQNFSE-----DEARNLCFQVF 62
++V+L +V + + +V + M DL L+ ++ A N E + ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSL----PCTDYVTTRWYR 117
G+ Y++ + + HRDL N +V+ +KIGD GM ++I + + RW
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWM- 199
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY------------- 164
APE L + D W+ G +++E+ S S +Q+ K
Sbjct: 200 APES-LKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 258
Query: 165 GRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
R L+ +NP+MRPT E + HP F F
Sbjct: 259 ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 23/167 (13%)
Query: 14 VKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQGY 73
V++ + H + I F+ + +K++ + + R++ FQ+ Q + ++H
Sbjct: 99 VQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKL 158
Query: 74 FHRDLKPSNLL--------------------VSKGVIKIGDLGMVKEIDSSLPCTDYVTT 113
H DLKP N+L V +++ D G D T V+T
Sbjct: 159 THTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSAT-FDHEHHST-IVST 216
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQI 160
R YRAPEV+L P D W++G I+FE LF ++ + +
Sbjct: 217 RHYRAPEVILELGWSQP-CDVWSIGCIIFEYYVGFTLFQTHDNREHL 262
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 38/181 (20%)
Query: 49 FSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGVI------------------ 90
F E E ++L QV +GL Y+H H D+KPSN+ +S+ I
Sbjct: 110 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 169
Query: 91 --KIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFR 148
KIGDLG V I S P + +R+ A EVL + P+ D +A+ +
Sbjct: 170 MFKIGDLGHVTRISS--PQVEEGDSRFL-ANEVLQENYTHLPKADIFALALTVVCAAGAE 226
Query: 149 ILFPGKNSADQIYKI-YGR-----------WVALISWLCSWNPRMRPTAAEALEHPFFRS 196
P + DQ ++I GR + L+ + +P RP+A ++H S
Sbjct: 227 ---PLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 283
Query: 197 C 197
Sbjct: 284 A 284
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEARN- 56
M ++ + H NI+ L + ++++ +Y L+ + G +S + + N
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 143
Query: 57 -----------LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE---I 101
+QV +G+ Y+ + HRDL N+LV++ V+KI D G+ ++ I
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 102 DSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
D T+ + APE L I + D W+ G +++E+ +
Sbjct: 204 DYYKKTTNGRLPVKWMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEARN- 56
M ++ + H NI+ L + ++++ +Y L+ + G +S + + N
Sbjct: 77 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 136
Query: 57 -----------LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE---I 101
+QV +G+ Y+ + HRDL N+LV++ V+KI D G+ ++ I
Sbjct: 137 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 196
Query: 102 DSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
D T+ + APE L I + D W+ G +++E+ +
Sbjct: 197 DYYKKTTNGRLPVKWMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL 241
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEARN- 56
M ++ + H NI+ L + ++++ +Y L+ + G +S + + N
Sbjct: 73 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 132
Query: 57 -----------LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE---I 101
+QV +G+ Y+ + HRDL N+LV++ V+KI D G+ ++ I
Sbjct: 133 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 192
Query: 102 DSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
D T+ + APE L I + D W+ G +++E+ +
Sbjct: 193 DYYKKTTNGRLPVKWMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL 237
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEARN- 56
M ++ + H NI+ L + ++++ +Y L+ + G +S + + N
Sbjct: 125 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 184
Query: 57 -----------LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE---I 101
+QV +G+ Y+ + HRDL N+LV++ V+KI D G+ ++ I
Sbjct: 185 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 244
Query: 102 DSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
D T+ + APE L I + D W+ G +++E+ +
Sbjct: 245 DYYKKTTNGRLPVKWMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL 289
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 31/165 (18%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDY---------------MESDLLKLMKESAGQNFS 50
K+ +HPNI+ L + +++ +Y +E+D + S S
Sbjct: 71 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 130
Query: 51 EDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGM-------VKEID 102
+ + V +G+ Y+ ++ + HRDL N+LV + V KI D G+ VK+
Sbjct: 131 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 190
Query: 103 SSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
LP RW A E L S + D W+ G +++E++S
Sbjct: 191 GRLP------VRW-MAIESLNYS-VYTTNSDVWSYGVLLWEIVSL 227
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 38/181 (20%)
Query: 49 FSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGVI------------------ 90
F E E ++L QV +GL Y+H H D+KPSN+ +S+ I
Sbjct: 110 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 169
Query: 91 --KIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFR 148
KIGDLG V I S P + +R+ A EVL + P+ D +A+ +
Sbjct: 170 MFKIGDLGHVTRISS--PQVEEGDSRFL-ANEVLQENYTHLPKADIFALALTVVCAAGAE 226
Query: 149 ILFPGKNSADQIYKI-YGR-----------WVALISWLCSWNPRMRPTAAEALEHPFFRS 196
P + DQ ++I GR + L+ + +P RP+A ++H S
Sbjct: 227 ---PLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 283
Query: 197 C 197
Sbjct: 284 A 284
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 75/181 (41%), Gaps = 38/181 (20%)
Query: 49 FSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKGVI------------------ 90
F E E ++L QV +GL Y+H H D+KPSN+ +S+ I
Sbjct: 112 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKV 171
Query: 91 --KIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFR 148
KIGDLG V I S P + +R+ A EVL + P+ D +A+ +
Sbjct: 172 MFKIGDLGHVTRISS--PQVEEGDSRFL-ANEVLQENYTHLPKADIFALALTVVCAAGAE 228
Query: 149 ILFPGKNSADQIYKI-YGR-----------WVALISWLCSWNPRMRPTAAEALEHPFFRS 196
P + DQ ++I GR + L+ + +P RP+A ++H S
Sbjct: 229 ---PLPRNGDQWHEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLS 285
Query: 197 C 197
Sbjct: 286 A 286
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 90/221 (40%), Gaps = 35/221 (15%)
Query: 12 NIVKLRNLVKEHEDVFIVFDYM-ESDL---LKLMKESAGQNFSE-----DEARNLCFQVF 62
++V+L +V + + +V + M DL L+ ++ A N E + ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSS----LPCTDYVTTRWYR 117
G+ Y++ + + HRDL N +V+ +KIGD GM ++I + + RW
Sbjct: 141 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWM- 199
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY------------- 164
APE L + D W+ G +++E+ S S +Q+ K
Sbjct: 200 APES-LKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNCP 258
Query: 165 GRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
R L+ +NP MRPT E + HP F F
Sbjct: 259 ERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 74/166 (44%), Gaps = 20/166 (12%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK---LMKESAGQNFSEDEARN- 56
M ++ + H NI+ L + ++++ +Y L+ + G +S + + N
Sbjct: 76 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 135
Query: 57 -----------LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE---I 101
+QV +G+ Y+ + HRDL N+LV++ V+KI D G+ ++ I
Sbjct: 136 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 195
Query: 102 DSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
D T+ + APE L I + D W+ G +++E+ +
Sbjct: 196 DYYKKTTNGRLPVKWMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL 240
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 32/190 (16%)
Query: 3 FLRKMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESA----------GQN--- 48
+ + H NIV L V ++ +Y DLL ++ A GQ+
Sbjct: 87 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEG 146
Query: 49 FSEDEARNLCF--------QVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVK 99
+++ R L QV QG+ ++ + HRD+ N+L++ G V KIGD G+ +
Sbjct: 147 LDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR 206
Query: 100 EIDSSLPCTDYVTTRWYRAPEVLLLSE-----ICGPEVDRWAMGAIMFEMLSFRI-LFPG 153
+I + ++Y+ R P + E + + D W+ G +++E+ S + +PG
Sbjct: 207 DIMND---SNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPG 263
Query: 154 KNSADQIYKI 163
+ YK+
Sbjct: 264 ILVNSKFYKL 273
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 31/165 (18%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDY---------------MESDLLKLMKESAGQNFS 50
K+ +HPNI+ L + +++ +Y +E+D + S S
Sbjct: 81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 51 EDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGM-------VKEID 102
+ + V +G+ Y+ ++ + HRDL N+LV + V KI D G+ VK+
Sbjct: 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 200
Query: 103 SSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
LP RW A E L S + D W+ G +++E++S
Sbjct: 201 GRLP------VRWM-AIESLNYS-VYTTNSDVWSYGVLLWEIVSL 237
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 99/243 (40%), Gaps = 26/243 (10%)
Query: 22 EHEDVFIVFDYMESD-LLKLMKESAGQNFS------------EDEARNLCFQVFQGLHYM 68
EH ++ V D E+ +L+ E G E A + Q+ + Y+
Sbjct: 87 EHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYL 146
Query: 69 HRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEVLLLSEI 127
+ HRD+K N+++++ IK+ D G ++ + T Y APEVL+ +
Sbjct: 147 RLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPY 206
Query: 128 CGPEVDRWAMG----AIMFEMLSFRILFPGKNSADQ-IYKIYGRWVALISWLCSWNPRMR 182
GPE++ W++G ++FE F L +A Y + ++L+S L P R
Sbjct: 207 RGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELMSLVSGLLQPVPERR 266
Query: 183 PTAAEALEHPFFRS----CHFVPRSVPLLCNNFEAVAFPTATVTMQGRSLTYSQVPNDGQ 238
T + + P+ + V N E+ A++ M RSL S V +
Sbjct: 267 TTLEKLVTDPWVTQPVNLADYTWEEV-FRVNKPESGVLSAASLEMGNRSL--SDVAQAQE 323
Query: 239 LCS 241
LC
Sbjct: 324 LCG 326
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 31/144 (21%)
Query: 11 PNIVKL----RNLVKEHEDVFIVFDYMES-DLLKLMKESAGQNFSEDEARNLCFQVFQGL 65
P+IV++ NL + + IV + ++ +L +++ Q F+E EA + + + +
Sbjct: 71 PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 66 HYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYRAPEV 121
Y+H HRD+KP NLL + ++K+ D G KE TT
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-----------TT-------- 171
Query: 122 LLLSEICGPEVDRWAMGAIMFEML 145
E D W++G IM+ +L
Sbjct: 172 ---GEKYDKSCDMWSLGVIMYILL 192
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
Query: 3 FLRKMNNHPN-IVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
+L K+ H + I++L + + +++V + DL +K+ ++ E ++ +
Sbjct: 59 YLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNM 116
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGVIKIGDLGMVKEID---SSLPCTDYVTTRWYRA 118
+ +H +H+ G H DLKP+N L+ G++K+ D G+ ++ +S+ V T Y
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 176
Query: 119 PEVL----------LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG--- 165
PE + P+ D W++G I++ M + P + +QI K++
Sbjct: 177 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAIID 234
Query: 166 -------------RWVALISWLCSWNPRMRPTAAEALEHPFFR 195
++ +P+ R + E L HP+ +
Sbjct: 235 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
Query: 3 FLRKMNNHPN-IVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
+L K+ H + I++L + + +++V + DL +K+ ++ E ++ +
Sbjct: 63 YLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNM 120
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGVIKIGDLGMVKEID---SSLPCTDYVTTRWYRA 118
+ +H +H+ G H DLKP+N L+ G++K+ D G+ ++ +S+ V T Y
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 180
Query: 119 PEVL----------LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG--- 165
PE + P+ D W++G I++ M + P + +QI K++
Sbjct: 181 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAIID 238
Query: 166 -------------RWVALISWLCSWNPRMRPTAAEALEHPFFR 195
++ +P+ R + E L HP+ +
Sbjct: 239 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 96/223 (43%), Gaps = 34/223 (15%)
Query: 3 FLRKMNNHPN-IVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
+L K+ H + I++L + + +++V + DL +K+ ++ E ++ +
Sbjct: 79 YLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNM 136
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGVIKIGDLGMVKEID---SSLPCTDYVTTRWYRA 118
+ +H +H+ G H DLKP+N L+ G++K+ D G+ ++ +S+ V T Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 196
Query: 119 PEVL----------LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG--- 165
PE + P+ D W++G I++ M + P + +QI K++
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAIID 254
Query: 166 -------------RWVALISWLCSWNPRMRPTAAEALEHPFFR 195
++ +P+ R + E L HP+ +
Sbjct: 255 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 43/225 (19%)
Query: 12 NIVKLRNLVKEHEDVFIVFDYM-ESDL---LKLMKESAGQNFSE-----DEARNLCFQVF 62
++V+L +V + + +V + M DL L+ ++ A N E + ++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY--------VTT 113
G+ Y++ + + HR+L N +V+ +KIGD GM ++I TDY +
Sbjct: 141 DGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE----TDYYRKGGKGLLPV 196
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY--------- 164
RW APE L + D W+ G +++E+ S S +Q+ K
Sbjct: 197 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 254
Query: 165 ----GRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
R L+ +NP MRPT E + HP F F
Sbjct: 255 DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 92/225 (40%), Gaps = 43/225 (19%)
Query: 12 NIVKLRNLVKEHEDVFIVFDYM-ESDL---LKLMKESAGQNFSE-----DEARNLCFQVF 62
++V+L +V + + +V + M DL L+ ++ A N E + ++
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY--------VTT 113
G+ Y++ + + HR+L N +V+ +KIGD GM ++I TDY +
Sbjct: 142 DGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE----TDYYRKGGKGLLPV 197
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY--------- 164
RW APE L + D W+ G +++E+ S S +Q+ K
Sbjct: 198 RWM-APES-LKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP 255
Query: 165 ----GRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
R L+ +NP MRPT E + HP F F
Sbjct: 256 DNCPERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEVSF 300
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKES---------------A 45
M ++ + H NI+ L + ++++ +Y L+ ++
Sbjct: 69 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 128
Query: 46 GQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE---I 101
+ S + + +QV +G+ Y+ + HRDL N+LV++ V+KI D G+ ++ I
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 188
Query: 102 DSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
D T+ + APE L I + D W+ G +++E+ +
Sbjct: 189 DYYKKTTNGRLPVKWMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL 233
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 74/165 (44%), Gaps = 18/165 (10%)
Query: 9 NHPNIVKL----RNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEA---RNLCFQV 61
HPNIV+ + VK + + +V + S LK + + F + R+ C Q+
Sbjct: 83 QHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLK----TYLKRFKVXKIKVLRSWCRQI 138
Query: 62 FQGLHYMHRQG--YFHRDLKPSNLLVS--KGVIKIGDLGMVKEIDSSLPCTDYVTTRWYR 117
+GL ++H + HRDLK N+ ++ G +KIGDLG+ +S + T +
Sbjct: 139 LKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF-AKAVIGTPEFX 197
Query: 118 APEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYK 162
APE E VD +A G E + + +A QIY+
Sbjct: 198 APEX--YEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYR 240
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 97/225 (43%), Gaps = 34/225 (15%)
Query: 1 MIFLRKMNNHPN-IVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCF 59
+ +L K+ H + I++L + + +++V + DL +K+ ++ E ++
Sbjct: 105 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWK 162
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSKGVIKIGDLGMVKEID---SSLPCTDYVTTRWY 116
+ + +H +H+ G H DLKP+N L+ G++K+ D G+ ++ +S+ V T Y
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 117 RAPEVL----------LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG- 165
PE + P+ D W++G I++ M + P + +QI K++
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAI 280
Query: 166 ---------------RWVALISWLCSWNPRMRPTAAEALEHPFFR 195
++ +P+ R + E L HP+ +
Sbjct: 281 IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 29/180 (16%)
Query: 3 FLRKMN-----NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
F+R++N +H N+++L +V + LL +++ G +F
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRY 120
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTD--YVTTR 114
QV +G+ Y+ + + HRDL NLL+ ++ ++KIGD G+++ +LP D YV
Sbjct: 121 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR----ALPQNDDHYVMQE 176
Query: 115 WYRAPEVLLLSEICGPE----------VDRWAMGAIMFEMLSF-RILFPGKNSADQIYKI 163
+ P C PE D W G ++EM ++ + + G N + ++KI
Sbjct: 177 HRKVPFAW-----CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 20/166 (12%)
Query: 1 MIFLRKMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKES---------------A 45
M ++ + H NI+ L + ++++ +Y L+ ++
Sbjct: 84 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNP 143
Query: 46 GQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKE---I 101
+ S + + +QV +G+ Y+ + HRDL N+LV++ V+KI D G+ ++ I
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI 203
Query: 102 DSSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
D T+ + APE L I + D W+ G +++E+ +
Sbjct: 204 DYYKKTTNGRLPVKWMAPEA-LFDRIYTHQSDVWSFGVLLWEIFTL 248
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 97/225 (43%), Gaps = 34/225 (15%)
Query: 1 MIFLRKMNNHPN-IVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCF 59
+ +L K+ H + I++L + + +++V + DL +K+ ++ E ++
Sbjct: 58 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWK 115
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSKGVIKIGDLGMVKEID---SSLPCTDYVTTRWY 116
+ + +H +H+ G H DLKP+N L+ G++K+ D G+ ++ +S+ V T Y
Sbjct: 116 NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 175
Query: 117 RAPEVL----------LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG- 165
PE + P+ D W++G I++ M + P + +QI K++
Sbjct: 176 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAI 233
Query: 166 ---------------RWVALISWLCSWNPRMRPTAAEALEHPFFR 195
++ +P+ R + E L HP+ +
Sbjct: 234 IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 29/180 (16%)
Query: 3 FLRKMN-----NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
F+R++N +H N+++L +V + LL +++ G +F
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRY 126
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTD--YVTTR 114
QV +G+ Y+ + + HRDL NLL+ ++ ++KIGD G+++ +LP D YV
Sbjct: 127 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR----ALPQNDDHYVMQE 182
Query: 115 WYRAPEVLLLSEICGPE----------VDRWAMGAIMFEMLSF-RILFPGKNSADQIYKI 163
+ P C PE D W G ++EM ++ + + G N + ++KI
Sbjct: 183 HRKVPFAW-----CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 29/180 (16%)
Query: 3 FLRKMN-----NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
F+R++N +H N+++L +V + LL +++ G +F
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRY 116
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTD--YVTTR 114
QV +G+ Y+ + + HRDL NLL+ ++ ++KIGD G+++ +LP D YV
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR----ALPQNDDHYVMQE 172
Query: 115 WYRAPEVLLLSEICGPE----------VDRWAMGAIMFEMLSF-RILFPGKNSADQIYKI 163
+ P C PE D W G ++EM ++ + + G N + ++KI
Sbjct: 173 HRKVPFAW-----CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL--CFQVFQGLH 66
+HP+IVKL ++ E+ V+I+ + L +L + FS D A + +Q+ L
Sbjct: 69 DHPHIVKLIGVITENP-VWIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 125
Query: 67 YMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSL---PCTDYVTTRWYRAPEVL 122
Y+ + + HRD+ N+LVS +K+GD G+ + ++ S + +W APE +
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM-APESI 184
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKI 163
D W G M+E+L + F G + D I +I
Sbjct: 185 NFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 29/180 (16%)
Query: 3 FLRKMN-----NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
F+R++N +H N+++L +V + LL +++ G +F
Sbjct: 62 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRY 120
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTD--YVTTR 114
QV +G+ Y+ + + HRDL NLL+ ++ ++KIGD G+++ +LP D YV
Sbjct: 121 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR----ALPQNDDHYVMQE 176
Query: 115 WYRAPEVLLLSEICGPE----------VDRWAMGAIMFEMLSF-RILFPGKNSADQIYKI 163
+ P C PE D W G ++EM ++ + + G N + ++KI
Sbjct: 177 HRKVPFAW-----CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 231
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 29/180 (16%)
Query: 3 FLRKMN-----NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
F+R++N +H N+++L +V + LL +++ G +F
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRY 116
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTD--YVTTR 114
QV +G+ Y+ + + HRDL NLL+ ++ ++KIGD G+++ +LP D YV
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMR----ALPQNDDHYVMQE 172
Query: 115 WYRAPEVLLLSEICGPE----------VDRWAMGAIMFEMLSF-RILFPGKNSADQIYKI 163
+ P C PE D W G ++EM ++ + + G N + ++KI
Sbjct: 173 HRKVPFAW-----CAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 97/225 (43%), Gaps = 34/225 (15%)
Query: 1 MIFLRKMNNHPN-IVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCF 59
+ +L K+ H + I++L + + +++V + DL +K+ ++ E ++
Sbjct: 105 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWK 162
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSKGVIKIGDLGMVKEID---SSLPCTDYVTTRWY 116
+ + +H +H+ G H DLKP+N L+ G++K+ D G+ ++ +S+ V T Y
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNY 222
Query: 117 RAPEVL----------LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG- 165
PE + P+ D W++G I++ M + F + +QI K++
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAI 280
Query: 166 ---------------RWVALISWLCSWNPRMRPTAAEALEHPFFR 195
++ +P+ R + E L HP+ +
Sbjct: 281 IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 33/159 (20%)
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI----------DSSLP 106
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I D+ LP
Sbjct: 150 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLP 209
Query: 107 CTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYK--- 162
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 210 L------KWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLK 261
Query: 163 --------IYGRWVALISWLCSWN--PRMRPTAAEALEH 191
Y + L W+ P RPT +E +EH
Sbjct: 262 EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 67/146 (45%), Gaps = 10/146 (6%)
Query: 10 HPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + ++ ++ +Y+ L+ ++ + + Q+ +G+ Y
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEY 132
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR-----WYRAPEV 121
+ + Y HRDL N+LV ++ +KIGD G+ K + WY APE
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 191
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
L S+ D W+ G +++E+ ++
Sbjct: 192 LTESKFSVAS-DVWSFGVVLYELFTY 216
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 31/165 (18%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDY---------------MESDLLKLMKESAGQNFS 50
K+ +HPNI+ L + +++ +Y +E+D + S S
Sbjct: 78 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 137
Query: 51 EDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGM-------VKEID 102
+ + V +G+ Y+ ++ + HR+L N+LV + V KI D G+ VK+
Sbjct: 138 SQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTM 197
Query: 103 SSLPCTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
LP RW A E L S + D W+ G +++E++S
Sbjct: 198 GRLP------VRWM-AIESLNYS-VYTTNSDVWSYGVLLWEIVSL 234
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL--CFQVFQGLH 66
+HP+IVKL ++ E+ V+I+ + L +L + FS D A + +Q+ L
Sbjct: 69 DHPHIVKLIGVITENP-VWIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 125
Query: 67 YMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSL---PCTDYVTTRWYRAPEVL 122
Y+ + + HRD+ N+LVS +K+GD G+ + ++ S + +W APE +
Sbjct: 126 YLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI 184
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKI 163
D W G M+E+L + F G + D I +I
Sbjct: 185 NFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 70/146 (47%), Gaps = 29/146 (19%)
Query: 19 LVKEHEDVFIVFDYMESD-LLKLMKESAGQNFSEDEARNLCF-----------QVFQGLH 66
++ +++V+I+++YME+D +LK + F + CF V
Sbjct: 111 IITNYDEVYIIYEYMENDSILKF-----DEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFS 165
Query: 67 YMHRQGYF-HRDLKPSNLLVSK-GVIKIGDLG----MV-KEIDSSLPCTDYVTTRWYRAP 119
Y+H + HRD+KPSN+L+ K G +K+ D G MV K+I S +++ ++
Sbjct: 166 YIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNE 225
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEML 145
S G +VD W++G ++ M
Sbjct: 226 -----SSYNGAKVDIWSLGICLYVMF 246
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 70/150 (46%), Gaps = 29/150 (19%)
Query: 28 IVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVS- 86
++F+ + L +++ + F ++ + C ++ + L+Y+ + H DLKP N+L+
Sbjct: 113 LIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDD 172
Query: 87 ----KGVIKIGDLGMVKEI------DSSLPCTDY-------------VTTRWYRAPEVLL 123
K +I + + K+I + + D+ + TR YRAPEV+L
Sbjct: 173 PYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVIL 232
Query: 124 LSEICGPEV--DRWAMGAIMFEMLSFRILF 151
G +V D W+ G ++ E+ + +LF
Sbjct: 233 ---NLGWDVSSDMWSFGCVLAELYTGSLLF 259
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 14/97 (14%)
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTTR---- 114
Q+ +G+ Y+H Q Y HR L N+L+ ++KIGD G+ K + +Y R
Sbjct: 120 QICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG---HEYYRVREDGD 176
Query: 115 ----WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
WY APE L + D W+ G ++E+L++
Sbjct: 177 SPVFWY-APECLKECKFYYAS-DVWSFGVTLYELLTY 211
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 14/97 (14%)
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTTR---- 114
Q+ +G+ Y+H Q Y HR L N+L+ ++KIGD G+ K + +Y R
Sbjct: 119 QICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG---HEYYRVREDGD 175
Query: 115 ----WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
WY APE L + D W+ G ++E+L++
Sbjct: 176 SPVFWY-APECLKECKFYYAS-DVWSFGVTLYELLTY 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 10 HPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + ++ ++ +Y+ L+ + + + Q+ +G+ Y
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR--------WYRA 118
+ + Y HRDL N+LV ++ +KIGD G+ K + ++ + WY A
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQD---KEFFKVKEPGESPIFWY-A 185
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
PE L S+ D W+ G +++E+ ++
Sbjct: 186 PESLTESKFSVAS-DVWSFGVVLYELFTY 213
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL--CFQVFQGLH 66
+HP+IVKL ++ E+ V+I+ + L+ + + +S D A + +Q+ L
Sbjct: 97 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALA 153
Query: 67 YMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSL---PCTDYVTTRWYRAPEVL 122
Y+ + + HRD+ N+LVS +K+GD G+ + ++ S + +W APE +
Sbjct: 154 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI 212
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKI 163
D W G M+E+L + F G + D I +I
Sbjct: 213 NFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 253
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL--CFQVFQGLH 66
+HP+IVKL ++ E+ V+I+ + L+ + + +S D A + +Q+ L
Sbjct: 74 DHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALA 130
Query: 67 YMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSL---PCTDYVTTRWYRAPEVL 122
Y+ + + HRD+ N+LVS +K+GD G+ + ++ S + +W APE +
Sbjct: 131 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI 189
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKI 163
D W G M+E+L + F G + D I +I
Sbjct: 190 NFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL--CFQVFQGLH 66
+HP+IVKL ++ E+ V+I+ + L +L + +S D A + +Q+ L
Sbjct: 69 DHPHIVKLIGVITENP-VWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 67 YMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSL---PCTDYVTTRWYRAPEVL 122
Y+ + + HRD+ N+LVS +K+GD G+ + ++ S + +W APE +
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI 184
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKI 163
D W G M+E+L + F G + D I +I
Sbjct: 185 NFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL--CFQVFQGLH 66
+HP+IVKL ++ E+ V+I+ + L +L + +S D A + +Q+ L
Sbjct: 69 DHPHIVKLIGVITENP-VWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 125
Query: 67 YMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSL---PCTDYVTTRWYRAPEVL 122
Y+ + + HRD+ N+LVS +K+GD G+ + ++ S + +W APE +
Sbjct: 126 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI 184
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKI 163
D W G M+E+L + F G + D I +I
Sbjct: 185 NFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 95/223 (42%), Gaps = 34/223 (15%)
Query: 3 FLRKMNNHPN-IVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQV 61
+L K+ H + I++L + + +++V + DL +K+ ++ E ++ +
Sbjct: 79 YLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWKNM 136
Query: 62 FQGLHYMHRQGYFHRDLKPSNLLVSKGVIKIGDLGMVKEI--DSSLPCTD-YVTTRWYRA 118
+ +H +H+ G H DLKP+N L+ G++K+ D G+ ++ D D V T Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDXXXVVKDSQVGTVNYMP 196
Query: 119 PEVL----------LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG--- 165
PE + P+ D W++G I++ M + P + +QI K++
Sbjct: 197 PEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKT--PFQQIINQISKLHAIID 254
Query: 166 -------------RWVALISWLCSWNPRMRPTAAEALEHPFFR 195
++ +P+ R + E L HP+ +
Sbjct: 255 PNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 10 HPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + ++ ++ +Y+ L+ + + + Q+ +G+ Y
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR-----WYRAPEV 121
+ + Y HRDL N+LV ++ +KIGD G+ K + WY APE
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 188
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
L S+ D W+ G +++E+ ++
Sbjct: 189 LTESKFSVAS-DVWSFGVVLYELFTY 213
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 10 HPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + ++ ++ +Y+ L+ + + + Q+ +G+ Y
Sbjct: 101 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 160
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR-----WYRAPEV 121
+ + Y HRDL N+LV ++ +KIGD G+ K + WY APE
Sbjct: 161 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 219
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
L S+ D W+ G +++E+ ++
Sbjct: 220 LTESKFSVAS-DVWSFGVVLYELFTY 244
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 10 HPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + ++ ++ +Y+ L+ + + + Q+ +G+ Y
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR-----WYRAPEV 121
+ + Y HRDL N+LV ++ +KIGD G+ K + WY APE
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 206
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
L S+ D W+ G +++E+ ++
Sbjct: 207 LTESKFSVAS-DVWSFGVVLYELFTY 231
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 19/175 (10%)
Query: 3 FLRKMN-----NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
F+R++N +H N+++L +V + LL +++ G +F
Sbjct: 58 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRY 116
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWY 116
QV +G+ Y+ + + HRDL NLL+ ++ ++KIGD G+++ + + D+ + +
Sbjct: 117 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN---DDHXVMQEH 173
Query: 117 R-------APEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQIYKI 163
R APE L + D W G ++EM ++ + + G N + ++KI
Sbjct: 174 RKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 227
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 47/101 (46%), Gaps = 14/101 (13%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSN-LLVSKGVIKIGDLGMVKEIDSSLPCTDYVTTR 114
L QV G+ Y+ + + HRDL N LLV++ KI D G+ K + + Y T R
Sbjct: 114 ELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD---DSYYTAR 170
Query: 115 --------WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
WY APE + + D W+ G M+E LS+
Sbjct: 171 SAGKWPLKWY-APECINFRKFSS-RSDVWSYGVTMWEALSY 209
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 10 HPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + ++ ++ +Y+ L+ + + + Q+ +G+ Y
Sbjct: 70 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 129
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR-----WYRAPEV 121
+ + Y HRDL N+LV ++ +KIGD G+ K + WY APE
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 188
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
L S+ D W+ G +++E+ ++
Sbjct: 189 LTESKFSVAS-DVWSFGVVLYELFTY 213
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL--CFQVFQGLH 66
+HP+IVKL ++ E+ V+I+ + L+ + + +S D A + +Q+ L
Sbjct: 71 DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALA 127
Query: 67 YMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSL---PCTDYVTTRWYRAPEVL 122
Y+ + + HRD+ N+LVS +K+GD G+ + ++ S + +W APE +
Sbjct: 128 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI 186
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKI 163
D W G M+E+L + F G + D I +I
Sbjct: 187 NFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 10 HPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + ++ ++ +Y+ L+ + + + Q+ +G+ Y
Sbjct: 69 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 128
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR-----WYRAPEV 121
+ + Y HRDL N+LV ++ +KIGD G+ K + WY APE
Sbjct: 129 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 187
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
L S+ D W+ G +++E+ ++
Sbjct: 188 LTESKFSVAS-DVWSFGVVLYELFTY 212
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 10 HPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + ++ ++ +Y+ L+ + + + Q+ +G+ Y
Sbjct: 71 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 130
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR--------WYRA 118
+ + Y HR+L N+LV ++ +KIGD G+ K + +Y + WY A
Sbjct: 131 LGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQD---KEYYKVKEPGESPIFWY-A 186
Query: 119 PEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
PE L S+ D W+ G +++E+ ++
Sbjct: 187 PESLTESKFSVAS-DVWSFGVVLYELFTY 214
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 10 HPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + ++ ++ +Y+ L+ + + + Q+ +G+ Y
Sbjct: 88 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 147
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR-----WYRAPEV 121
+ + Y HRDL N+LV ++ +KIGD G+ K + WY APE
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 206
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
L S+ D W+ G +++E+ ++
Sbjct: 207 LTESKFSVAS-DVWSFGVVLYELFTY 231
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 10 HPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + ++ ++ +Y+ L+ + + + Q+ +G+ Y
Sbjct: 74 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 133
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR-----WYRAPEV 121
+ + Y HRDL N+LV ++ +KIGD G+ K + WY APE
Sbjct: 134 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 192
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
L S+ D W+ G +++E+ ++
Sbjct: 193 LTESKFSVAS-DVWSFGVVLYELFTY 217
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTT---- 113
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I DYV
Sbjct: 151 FQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKD---PDYVRKGDAR 207
Query: 114 ---RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIYGRWVA 169
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 208 LPLKWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 265
Query: 170 L-----------ISWLCSWN--PRMRPTAAEALEH 191
+ + L W+ P RPT +E +EH
Sbjct: 266 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 14/96 (14%)
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTTR---- 114
Q+ +G+ Y+H Q Y HR+L N+L+ ++KIGD G+ K + +Y R
Sbjct: 125 QICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG---HEYYRVREDGD 181
Query: 115 ----WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS 146
WY APE L + D W+ G ++E+L+
Sbjct: 182 SPVFWY-APECLKEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 10 HPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + ++ ++ +Y+ L+ + + + Q+ +G+ Y
Sbjct: 68 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 127
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR-----WYRAPEV 121
+ + Y HRDL N+LV ++ +KIGD G+ K + WY APE
Sbjct: 128 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 186
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
L S+ D W+ G +++E+ ++
Sbjct: 187 LTESKFSVAS-DVWSFGVVLYELFTY 211
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 83/175 (47%), Gaps = 19/175 (10%)
Query: 3 FLRKMN-----NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL 57
F+R++N +H N+++L +V + LL +++ G +F
Sbjct: 68 FIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRY 126
Query: 58 CFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTRWY 116
QV +G+ Y+ + + HRDL NLL+ ++ ++KIGD G+++ + + D+ + +
Sbjct: 127 AVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN---DDHXVMQEH 183
Query: 117 R-------APEVLLLSEICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQIYKI 163
R APE L + D W G ++EM ++ + + G N + ++KI
Sbjct: 184 RKVPFAWCAPES-LKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKI 237
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL--CFQVFQGLH 66
+HP+IVKL ++ E+ V+I+ + L+ + + +S D A + +Q+ L
Sbjct: 72 DHPHIVKLIGVITEN-PVWIIMELCTLGELRSFLQV--RKYSLDLASLILYAYQLSTALA 128
Query: 67 YMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSL---PCTDYVTTRWYRAPEVL 122
Y+ + + HRD+ N+LVS +K+GD G+ + ++ S + +W APE +
Sbjct: 129 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI 187
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKI 163
D W G M+E+L + F G + D I +I
Sbjct: 188 NFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 228
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 10 HPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + ++ ++ +Y+ L+ + + + Q+ +G+ Y
Sbjct: 76 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 135
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR-----WYRAPEV 121
+ + Y HRDL N+LV ++ +KIGD G+ K + WY APE
Sbjct: 136 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 194
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
L S+ D W+ G +++E+ ++
Sbjct: 195 LTESKFSVAS-DVWSFGVVLYELFTY 219
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 10 HPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + ++ ++ +Y+ L+ + + + Q+ +G+ Y
Sbjct: 73 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 132
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR-----WYRAPEV 121
+ + Y HRDL N+LV ++ +KIGD G+ K + WY APE
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 191
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
L S+ D W+ G +++E+ ++
Sbjct: 192 LTESKFSVAS-DVWSFGVVLYELFTY 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 10 HPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + ++ ++ +Y+ L+ + + + Q+ +G+ Y
Sbjct: 75 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 134
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR-----WYRAPEV 121
+ + Y HRDL N+LV ++ +KIGD G+ K + WY APE
Sbjct: 135 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 193
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
L S+ D W+ G +++E+ ++
Sbjct: 194 LTESKFSVAS-DVWSFGVVLYELFTY 218
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL--CFQVFQGLH 66
+HP+IVKL ++ E+ V+I+ + L +L + +S D A + +Q+ L
Sbjct: 66 DHPHIVKLIGVITEN-PVWIIMEL--CTLGELRSFLQVRKYSLDLASLILYAYQLSTALA 122
Query: 67 YMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSL---PCTDYVTTRWYRAPEVL 122
Y+ + + HRD+ N+LVS +K+GD G+ + ++ S + +W APE +
Sbjct: 123 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI 181
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKI 163
D W G M+E+L + F G + D I +I
Sbjct: 182 NFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 222
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 14/96 (14%)
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTTR---- 114
Q+ +G+ Y+H Q Y HR+L N+L+ ++KIGD G+ K + +Y R
Sbjct: 125 QICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG---HEYYRVREDGD 181
Query: 115 ----WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS 146
WY APE L + D W+ G ++E+L+
Sbjct: 182 SPVFWY-APECLKEYKFYYAS-DVWSFGVTLYELLT 215
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 33/158 (20%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI----------DSSLPC 107
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I D+ LP
Sbjct: 155 FQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 108 TDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIYGR 166
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 215 ------KWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
Query: 167 WVAL-----------ISWLCSWN--PRMRPTAAEALEH 191
+ + L W+ P RPT +E +EH
Sbjct: 267 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 10/146 (6%)
Query: 10 HPNIVKLRNLVKE--HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H NIVK + + ++ ++ +Y+ L+ + + + Q+ +G+ Y
Sbjct: 77 HDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEY 136
Query: 68 MHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR-----WYRAPEV 121
+ + Y HRDL N+LV ++ +KIGD G+ K + WY APE
Sbjct: 137 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWY-APES 195
Query: 122 LLLSEICGPEVDRWAMGAIMFEMLSF 147
L S+ D W+ G +++E+ ++
Sbjct: 196 LTESKFSVAS-DVWSFGVVLYELFTY 220
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL--CFQVFQGLH 66
+HP+IVKL ++ E+ V+I+ + L +L + FS D A + +Q+ L
Sbjct: 449 DHPHIVKLIGVITENP-VWIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 505
Query: 67 YMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSL---PCTDYVTTRWYRAPEVL 122
Y+ + + HRD+ N+LVS +K+GD G+ + ++ S + +W APE +
Sbjct: 506 YLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI 564
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKI 163
D W G M+E+L + F G + D I +I
Sbjct: 565 NFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTT---- 113
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I DYV
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD---PDYVRKGDAR 211
Query: 114 ---RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYK------- 162
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 212 LPLKWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 269
Query: 163 ----IYGRWVALISWLCSWN--PRMRPTAAEALEH 191
Y + L W+ P RPT +E +EH
Sbjct: 270 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 6/92 (6%)
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPC----TDYVTTR 114
Q+ +G+ Y+H Q Y HRDL N+L+ ++KIGD G+ K + D +
Sbjct: 142 QICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPV 201
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS 146
++ APE L + D W+ G ++E+L+
Sbjct: 202 FWYAPECLKEYKFYYAS-DVWSFGVTLYELLT 232
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTT---- 113
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I DYV
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD---PDYVRKGDAR 202
Query: 114 ---RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIYGRWVA 169
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 203 LPLKWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 260
Query: 170 L-----------ISWLCSWN--PRMRPTAAEALEH 191
+ + L W+ P RPT +E +EH
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTT---- 113
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I DYV
Sbjct: 205 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD---PDYVRKGDAR 261
Query: 114 ---RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIYGRWVA 169
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 262 LPLKWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 319
Query: 170 L-----------ISWLCSWN--PRMRPTAAEALEH 191
+ + L W+ P RPT +E +EH
Sbjct: 320 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTT---- 113
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I DYV
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD---PDYVRKGDAR 202
Query: 114 ---RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIYGRWVA 169
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 203 LPLKWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 260
Query: 170 L-----------ISWLCSWN--PRMRPTAAEALEH 191
+ + L W+ P RPT +E +EH
Sbjct: 261 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYM-ESDLLKLMKESAGQNFSEDEAR-NLCFQVFQGLHY 67
H N+V+L + +D+ +V+ YM LL + G R + G+++
Sbjct: 89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINF 148
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVK---EIDSSLPCTDYVTTRWYRAPEVLL 123
+H + HRD+K +N+L+ + KI D G+ + + ++ + V T Y APE L
Sbjct: 149 LHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEA-L 207
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
EI P+ D ++ G ++ E+++
Sbjct: 208 RGEIT-PKSDIYSFGVVLLEIIT 229
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTT---- 113
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I DYV
Sbjct: 192 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD---PDYVRKGDAR 248
Query: 114 ---RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIYGRWVA 169
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 249 LPLKWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 306
Query: 170 L-----------ISWLCSWN--PRMRPTAAEALEH 191
+ + L W+ P RPT +E +EH
Sbjct: 307 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 33/158 (20%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI----------DSSLPC 107
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I D+ LP
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 108 TDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIYGR 166
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 206 ------KWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
Query: 167 WVAL-----------ISWLCSWN--PRMRPTAAEALEH 191
+ + L W+ P RPT +E +EH
Sbjct: 258 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTT---- 113
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I DYV
Sbjct: 207 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD---PDYVRKGDAR 263
Query: 114 ---RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIYGRWVA 169
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 264 LPLKWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 321
Query: 170 L-----------ISWLCSWN--PRMRPTAAEALEH 191
+ + L W+ P RPT +E +EH
Sbjct: 322 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTT---- 113
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I DYV
Sbjct: 157 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD---PDYVRKGDAR 213
Query: 114 ---RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYK------- 162
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 214 LPLKWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 271
Query: 163 ----IYGRWVALISWLCSWN--PRMRPTAAEALEH 191
Y + L W+ P RPT +E +EH
Sbjct: 272 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 13 IVKLRNLV--KEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCF--QVFQGLHYM 68
IVK R + + + +V +Y+ S L+ + D +R L + Q+ +G+ Y+
Sbjct: 86 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL--DASRLLLYSSQICKGMEYL 143
Query: 69 HRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR--------WYRAP 119
+ HRDL N+LV S+ +KI D G+ K + DY R WY AP
Sbjct: 144 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD---KDYYVVREPGQSPIFWY-AP 199
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSF 147
E L I + D W+ G +++E+ ++
Sbjct: 200 ES-LSDNIFSRQSDVWSFGVVLYELFTY 226
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 33/158 (20%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI----------DSSLPC 107
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I D+ LP
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP- 213
Query: 108 TDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIYGR 166
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 214 -----LKWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
Query: 167 WVAL-----------ISWLCSWN--PRMRPTAAEALEH 191
+ + L W+ P RPT +E +EH
Sbjct: 267 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 33/158 (20%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI----------DSSLPC 107
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I D+ LP
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP- 213
Query: 108 TDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIYGR 166
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 214 -----LKWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
Query: 167 WVAL-----------ISWLCSWN--PRMRPTAAEALEH 191
+ + L W+ P RPT +E +EH
Sbjct: 267 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 13 IVKLRNLV--KEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCF--QVFQGLHYM 68
IVK R + + + +V +Y+ S L+ + D +R L + Q+ +G+ Y+
Sbjct: 73 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL--DASRLLLYSSQICKGMEYL 130
Query: 69 HRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR--------WYRAP 119
+ HRDL N+LV S+ +KI D G+ K + DY R WY AP
Sbjct: 131 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD---KDYYVVREPGQSPIFWY-AP 186
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSF 147
E L I + D W+ G +++E+ ++
Sbjct: 187 ES-LSDNIFSRQSDVWSFGVVLYELFTY 213
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTT---- 113
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I DYV
Sbjct: 200 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD---PDYVRKGDAR 256
Query: 114 ---RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIYGRWVA 169
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 257 LPLKWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 314
Query: 170 L-----------ISWLCSWN--PRMRPTAAEALEH 191
+ + L W+ P RPT +E +EH
Sbjct: 315 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 33/158 (20%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI----------DSSLPC 107
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I D+ LP
Sbjct: 146 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 108 TDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIYGR 166
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 206 ------KWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
Query: 167 WVAL-----------ISWLCSWN--PRMRPTAAEALEH 191
+ + L W+ P RPT +E +EH
Sbjct: 258 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 70/155 (45%), Gaps = 27/155 (17%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSLPCTDYVTT---- 113
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I DYV
Sbjct: 198 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD---PDYVRKGDAR 254
Query: 114 ---RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKIYGRWVA 169
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 255 LPLKWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR 312
Query: 170 L-----------ISWLCSWN--PRMRPTAAEALEH 191
+ + L W+ P RPT +E +EH
Sbjct: 313 MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 33/158 (20%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEI----------DSSLPC 107
FQV +G+ ++ + HRDL N+L+S K V+KI D G+ ++I D+ LP
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLP- 213
Query: 108 TDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYK---- 162
+W APE + + + D W+ G +++E+ S +PG ++ +
Sbjct: 214 -----LKWM-APET-IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
Query: 163 -------IYGRWVALISWLCSWN--PRMRPTAAEALEH 191
Y + L W+ P RPT +E +EH
Sbjct: 267 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 20/148 (13%)
Query: 13 IVKLRNLV--KEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCF--QVFQGLHYM 68
IVK R + + + +V +Y+ S L+ + D +R L + Q+ +G+ Y+
Sbjct: 74 IVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARL--DASRLLLYSSQICKGMEYL 131
Query: 69 HRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR--------WYRAP 119
+ HRDL N+LV S+ +KI D G+ K + DY R WY AP
Sbjct: 132 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD---KDYYVVREPGQSPIFWY-AP 187
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSF 147
E L I + D W+ G +++E+ ++
Sbjct: 188 ES-LSDNIFSRQSDVWSFGVVLYELFTY 214
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 96/225 (42%), Gaps = 34/225 (15%)
Query: 1 MIFLRKMNNHPN-IVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCF 59
+ +L K+ H + I++L + + +++V + DL +K+ ++ E ++
Sbjct: 105 IAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDPWERKSYWK 162
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSKGVIKIGDLGMVKEID---SSLPCTDYVTTRWY 116
+ + +H +H+ G H DLKP+N L+ G++K+ D G+ ++ +S+ V Y
Sbjct: 163 NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNY 222
Query: 117 RAPEVL----------LLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIYG- 165
PE + P+ D W++G I++ M + F + +QI K++
Sbjct: 223 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF--QQIINQISKLHAI 280
Query: 166 ---------------RWVALISWLCSWNPRMRPTAAEALEHPFFR 195
++ +P+ R + E L HP+ +
Sbjct: 281 IDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNL--CFQVFQGLH 66
+HP+IVKL ++ E+ V+I+ + L +L + FS D A + +Q+ L
Sbjct: 449 DHPHIVKLIGVITENP-VWIIMEL--CTLGELRSFLQVRKFSLDLASLILYAYQLSTALA 505
Query: 67 YMHRQGYFHRDLKPSNLLVS-KGVIKIGDLGMVKEIDSSL---PCTDYVTTRWYRAPEVL 122
Y+ + + HRD+ N+LVS +K+GD G+ + ++ S + +W APE +
Sbjct: 506 YLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM-APESI 564
Query: 123 LLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSADQIYKI 163
D W G M+E+L + F G + D I +I
Sbjct: 565 NFRRFTSAS-DVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 48/87 (55%), Gaps = 6/87 (6%)
Query: 64 GLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVK---EIDSSLPCTDYVTTRWYRAP 119
G++++H + HRD+K +N+L+ + KI D G+ + + + + V T Y AP
Sbjct: 136 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP 195
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLS 146
E L EI P+ D ++ G ++ E+++
Sbjct: 196 EA-LRGEIT-PKSDIYSFGVVLLEIIT 220
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR---- 114
Q+ +G+ Y+ + Y HRDL N+LV ++ +KIGD G+ K +
Sbjct: 125 QICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPI 184
Query: 115 -WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
WY APE L S+ D W+ G +++E+ ++
Sbjct: 185 FWY-APESLTESKFSVAS-DVWSFGVVLYELFTY 216
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 8/143 (5%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLL--KLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H N+V+L + +D+ +V+ YM + L +L S + G+++
Sbjct: 89 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINF 148
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVK---EIDSSLPCTDYVTTRWYRAPEVLL 123
+H + HRD+K +N+L+ + KI D G+ + + ++ V T Y APE L
Sbjct: 149 LHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEA-L 207
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
EI P+ D ++ G ++ E+++
Sbjct: 208 RGEIT-PKSDIYSFGVVLLEIIT 229
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 30/170 (17%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK-LMKES--AGQNF------------S 50
K NHP+++KL + + ++ +Y + L+ ++ES G +
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 51 EDEARNL--------CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEI 101
+ R L +Q+ QG+ Y+ HRDL N+LV++G +KI D G+ +++
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 102 ---DSSLP-CTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
DS + + +W L I + D W+ G +++E+++
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIES--LFDHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 15/148 (10%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCFQVFQGLHYM 68
++P IV+L V + E + +V + L + L QV G+ Y+
Sbjct: 394 DNPYIVRLIG-VCQAEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 452
Query: 69 HRQGYFHRDLKPSN-LLVSKGVIKIGDLGMVKEIDSSLPCTDYVTTR--------WYRAP 119
+ + HR+L N LLV++ KI D G+ K + + Y T R WY AP
Sbjct: 453 EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGAD---DSYYTARSAGKWPLKWY-AP 508
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSF 147
E + + D W+ G M+E LS+
Sbjct: 509 ECINFRKFSS-RSDVWSYGVTMWEALSY 535
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 21/180 (11%)
Query: 4 LRKMNNHPNIVKLRNLVKE----HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCF 59
L+K+N H NIVKL + +E H+ + + F S L + S E E +
Sbjct: 61 LKKLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR 119
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSKG-----VIKIGDLGMVKEIDSSLPCTDYVTTR 114
V G++++ G HR++KP N++ G V K+ D G +E++ T
Sbjct: 120 DVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTE 179
Query: 115 WYRAPEVLLLSEI-------CGPEVDRWAMGAIMFEM----LSFRILFPGKNSADQIYKI 163
Y P++ + + G VD W++G + L FR + + + +YKI
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 13/97 (13%)
Query: 59 FQVFQGLHYMHRQGYFHRDLKPSNLLVSK-GVIKIGDLGMVKEIDSSLPCTDYVTT---- 113
FQV +G+ ++ + HRDL N+L+S+ V+KI D G+ ++I + DYV
Sbjct: 206 FQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKN---PDYVRKGDTR 262
Query: 114 ---RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+W APE + +I + D W+ G +++E+ S
Sbjct: 263 LPLKWM-APES-IFDKIYSTKSDVWSYGVLLWEIFSL 297
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 61/118 (51%), Gaps = 12/118 (10%)
Query: 37 LLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGDL 95
LL ++E+ G+ S+D N C Q+ +G+ Y+ HRDL N+LV S +KI D
Sbjct: 105 LLDHVRENRGRLGSQD-LLNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDF 163
Query: 96 GMVKEIDSSLPCTDY------VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
G+ + +D + T+Y V +W A E +L + D W+ G ++E+++F
Sbjct: 164 GLARLLD--IDETEYHADGGKVPIKWM-ALESILRRRFTH-QSDVWSYGVTVWELMTF 217
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 58/240 (24%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDL---LKLMKESAGQNF-----SEDEA 54
+++ N H ++V+L +V + + ++ + M DL L+ ++ + N S +
Sbjct: 82 MKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY--- 110
+ ++ G+ Y++ + HRDL N +V++ +KIGD GM ++I TDY
Sbjct: 141 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE----TDYYRK 196
Query: 111 -----VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS--------------FRILF 151
+ RW +PE L + D W+ G +++E+ + R +
Sbjct: 197 GGKGLLPVRWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 254
Query: 152 PG------KNSADQIYKIYGRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
G N D +++ L+ +NP+MRP+ E + P FR F
Sbjct: 255 EGGLLDKPDNCPDMLFE-------LMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 307
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 58/240 (24%)
Query: 4 LRKMNNHPNIVKLRNLVKEHEDVFIVFDYM-ESDL---LKLMKESAGQNF-----SEDEA 54
+++ N H ++V+L +V + + ++ + M DL L+ ++ + N S +
Sbjct: 72 MKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 55 RNLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY--- 110
+ ++ G+ Y++ + HRDL N +V++ +KIGD GM ++I TDY
Sbjct: 131 IQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE----TDYYRK 186
Query: 111 -----VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS--------------FRILF 151
+ RW +PE L + D W+ G +++E+ + R +
Sbjct: 187 GGKGLLPVRWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM 244
Query: 152 PG------KNSADQIYKIYGRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
G N D +++ L+ +NP+MRP+ E + P FR F
Sbjct: 245 EGGLLDKPDNCPDMLFE-------LMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 297
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 30/170 (17%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK-LMKES--AGQNF------------S 50
K NHP+++KL + + ++ +Y + L+ ++ES G +
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 51 EDEARNL--------CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEI 101
+ R L +Q+ QG+ Y+ HRDL N+LV++G +KI D G+ +++
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 102 ---DSSLP-CTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
DS + + +W L I + D W+ G +++E+++
Sbjct: 201 YEEDSXVKRSQGRIPVKWMAIES--LFDHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 21/180 (11%)
Query: 4 LRKMNNHPNIVKLRNLVKE----HEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCF 59
L+K+N H NIVKL + +E H+ + + F S L + S E E +
Sbjct: 61 LKKLN-HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR 119
Query: 60 QVFQGLHYMHRQGYFHRDLKPSNLLVSKG-----VIKIGDLGMVKEIDSSLPCTDYVTTR 114
V G++++ G HR++KP N++ G V K+ D G +E++ T
Sbjct: 120 DVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTE 179
Query: 115 WYRAPEVLLLSEI-------CGPEVDRWAMGAIMFEM----LSFRILFPGKNSADQIYKI 163
Y P++ + + G VD W++G + L FR + + + +YKI
Sbjct: 180 EYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Query: 10 HPNIVKLRNLVKEHEDVFIVFDYMESDLL--KLMKESAGQNFSEDEARNLCFQVFQGLHY 67
H N+V+L + +D+ +V+ YM + L +L S + G+++
Sbjct: 83 HENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINF 142
Query: 68 MHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVK---EIDSSLPCTDYVTTRWYRAPEVLL 123
+H + HRD+K +N+L+ + KI D G+ + + + V T Y APE L
Sbjct: 143 LHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEA-L 201
Query: 124 LSEICGPEVDRWAMGAIMFEMLS 146
EI P+ D ++ G ++ E+++
Sbjct: 202 RGEIT-PKSDIYSFGVVLLEIIT 223
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTTR 114
+ +QV +G+ ++ + HRDL N+L++ G + KI D G+ ++I + ++YV
Sbjct: 165 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKG 221
Query: 115 WYRAPEVLLLSE-----ICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQIYKI 163
R P + E + E D W+ G ++E+ S +PG + YK+
Sbjct: 222 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 276
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 30/170 (17%)
Query: 6 KMNNHPNIVKLRNLVKEHEDVFIVFDYMESDLLK-LMKES--AGQNF------------S 50
K NHP+++KL + + ++ +Y + L+ ++ES G +
Sbjct: 81 KQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140
Query: 51 EDEARNL--------CFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEI 101
+ R L +Q+ QG+ Y+ HRDL N+LV++G +KI D G+ +++
Sbjct: 141 HPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDV 200
Query: 102 ---DSSLP-CTDYVTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
DS + + +W L I + D W+ G +++E+++
Sbjct: 201 YEEDSYVKRSQGRIPVKWMAIES--LFDHIYTTQSDVWSFGVLLWEIVTL 248
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTTR 114
+ +QV +G+ ++ + HRDL N+L++ G + KI D G+ ++I + ++YV
Sbjct: 149 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKG 205
Query: 115 WYRAPEVLLLSE-----ICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQIYKI 163
R P + E + E D W+ G ++E+ S +PG + YK+
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 260
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSN-LLVSKGVIKIGDLGMVKEIDSSLPCTDYVT--- 112
L QV G+ Y+ + HRDL N LLV++ KI D G+ K + + T
Sbjct: 475 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 534
Query: 113 --TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+WY APE + + + D W+ G +M+E S+
Sbjct: 535 WPVKWY-APECINYYKFSS-KSDVWSFGVLMWEAFSY 569
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSN-LLVSKGVIKIGDLGMVKEIDSSLPCTDYVT--- 112
L QV G+ Y+ + HRDL N LLV++ KI D G+ K + + T
Sbjct: 474 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 533
Query: 113 --TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+WY APE + + + D W+ G +M+E S+
Sbjct: 534 WPVKWY-APECINYYKFSS-KSDVWSFGVLMWEAFSY 568
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 48/178 (26%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY----- 110
+ ++ G+ Y++ + HRDL N +V++ +KIGD GM ++I TDY
Sbjct: 136 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE----TDYYRKGG 191
Query: 111 ---VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS--------------FRILFPG 153
+ RW +PE L + D W+ G +++E+ + R + G
Sbjct: 192 KGLLPVRWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 249
Query: 154 ------KNSADQIYKIYGRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
N D +++ L+ +NP+MRP+ E + P FR F
Sbjct: 250 GLLDKPDNCPDMLFE-------LMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 300
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTTR 114
+ +QV +G+ ++ + HRDL N+L++ G + KI D G+ ++I + ++YV
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKG 228
Query: 115 WYRAPEVLLLSE-----ICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQIYKI 163
R P + E + E D W+ G ++E+ S +PG + YK+
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSN-LLVSKGVIKIGDLGMVKEIDSSLPCTDYVT--- 112
L QV G+ Y+ + HRDL N LLV++ KI D G+ K + + T
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 113 --TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+WY APE + + + D W+ G +M+E S+
Sbjct: 192 WPVKWY-APECINYYKFSS-KSDVWSFGVLMWEAFSY 226
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSN-LLVSKGVIKIGDLGMVKEIDSSLPCTDYVT--- 112
L QV G+ Y+ + HRDL N LLV++ KI D G+ K + + T
Sbjct: 132 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 191
Query: 113 --TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+WY APE + + + D W+ G +M+E S+
Sbjct: 192 WPVKWY-APECINYYKFSS-KSDVWSFGVLMWEAFSY 226
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSN-LLVSKGVIKIGDLGMVKEIDSSLPCTDYVT--- 112
L QV G+ Y+ + HRDL N LLV++ KI D G+ K + + T
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGK 175
Query: 113 --TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+WY APE + + + D W+ G +M+E S+
Sbjct: 176 WPVKWY-APECINYYKFS-SKSDVWSFGVLMWEAFSY 210
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 10/115 (8%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTTR 114
+ +QV +G+ ++ + HRDL N+L++ G + KI D G+ ++I + ++YV
Sbjct: 167 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKND---SNYVVKG 223
Query: 115 WYRAPEVLLLSE-----ICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQIYKI 163
R P + E + E D W+ G ++E+ S +PG + YK+
Sbjct: 224 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 278
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSN-LLVSKGVIKIGDLGMVKEIDSSLPCTDYVT--- 112
L QV G+ Y+ + HRDL N LLV++ KI D G+ K + + T
Sbjct: 130 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 189
Query: 113 --TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+WY APE + + + D W+ G +M+E S+
Sbjct: 190 WPVKWY-APECINYYKFSS-KSDVWSFGVLMWEAFSY 224
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSN-LLVSKGVIKIGDLGMVKEIDSSLPCTDYVT--- 112
L QV G+ Y+ + HRDL N LLV++ KI D G+ K + + T
Sbjct: 122 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 181
Query: 113 --TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+WY APE + + + D W+ G +M+E S+
Sbjct: 182 WPVKWY-APECINYYKFSS-KSDVWSFGVLMWEAFSY 216
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSN-LLVSKGVIKIGDLGMVKEIDSSLPCTDYVT--- 112
L QV G+ Y+ + HRDL N LLV++ KI D G+ K + + T
Sbjct: 112 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 171
Query: 113 --TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+WY APE + + + D W+ G +M+E S+
Sbjct: 172 WPVKWY-APECINYYKFS-SKSDVWSFGVLMWEAFSY 206
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSN-LLVSKGVIKIGDLGMVKEIDSSLPCTDYVT--- 112
L QV G+ Y+ + HRDL N LLV++ KI D G+ K + + T
Sbjct: 110 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 169
Query: 113 --TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+WY APE + + + D W+ G +M+E S+
Sbjct: 170 WPVKWY-APECINYYKFS-SKSDVWSFGVLMWEAFSY 204
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 48/178 (26%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY----- 110
+ ++ G+ Y++ + HRDL N +V++ +KIGD GM ++I TDY
Sbjct: 165 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE----TDYYRKGG 220
Query: 111 ---VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS--------------FRILFPG 153
+ RW +PE L + D W+ G +++E+ + R + G
Sbjct: 221 KGLLPVRWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 278
Query: 154 ------KNSADQIYKIYGRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
N D +++ L+ +NP+MRP+ E + P FR F
Sbjct: 279 GLLDKPDNCPDMLFE-------LMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 329
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSN-LLVSKGVIKIGDLGMVKEIDSSLPCTDYVT--- 112
L QV G+ Y+ + HRDL N LLV++ KI D G+ K + + T
Sbjct: 116 LVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGK 175
Query: 113 --TRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
+WY APE + + + D W+ G +M+E S+
Sbjct: 176 WPVKWY-APECINYYKFSS-KSDVWSFGVLMWEAFSY 210
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 48/179 (26%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY---- 110
+ ++ G+ Y++ + HRDL N +V++ +KIGD GM ++I TDY
Sbjct: 135 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE----TDYYRKG 190
Query: 111 ----VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS--------------FRILFP 152
+ RW +PE L + D W+ G +++E+ + R +
Sbjct: 191 GKGLLPVRWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 248
Query: 153 G------KNSADQIYKIYGRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
G N D +++ L+ +NP+MRP+ E + P FR F
Sbjct: 249 GGLLDKPDNCPDMLFE-------LMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 300
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 48/179 (26%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY---- 110
+ ++ G+ Y++ + HRDL N +V++ +KIGD GM ++I TDY
Sbjct: 133 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE----TDYYRKG 188
Query: 111 ----VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS--------------FRILFP 152
+ RW +PE L + D W+ G +++E+ + R +
Sbjct: 189 GKGLLPVRWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 246
Query: 153 G------KNSADQIYKIYGRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
G N D +++ L+ +NP+MRP+ E + P FR F
Sbjct: 247 GGLLDKPDNCPDMLFE-------LMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 298
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 48/178 (26%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY----- 110
+ ++ G+ Y++ + HRDL N +V++ +KIGD GM ++I TDY
Sbjct: 143 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE----TDYYRKGG 198
Query: 111 ---VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS--------------FRILFPG 153
+ RW +PE L + D W+ G +++E+ + R + G
Sbjct: 199 KGLLPVRWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 256
Query: 154 ------KNSADQIYKIYGRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
N D +++ L+ +NP+MRP+ E + P FR F
Sbjct: 257 GLLDKPDNCPDMLFE-------LMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 307
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 48/178 (26%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY----- 110
+ ++ G+ Y++ + HRDL N +V++ +KIGD GM ++I TDY
Sbjct: 130 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE----TDYYRKGG 185
Query: 111 ---VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS--------------FRILFPG 153
+ RW +PE L + D W+ G +++E+ + R + G
Sbjct: 186 KGLLPVRWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEG 243
Query: 154 ------KNSADQIYKIYGRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
N D +++ L+ +NP+MRP+ E + P FR F
Sbjct: 244 GLLDKPDNCPDMLFE-------LMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 294
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 73/179 (40%), Gaps = 48/179 (26%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY---- 110
+ ++ G+ Y++ + HRDL N +V++ +KIGD GM ++I TDY
Sbjct: 136 QMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE----TDYYRKG 191
Query: 111 ----VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS--------------FRILFP 152
+ RW +PE L + D W+ G +++E+ + R +
Sbjct: 192 GKGLLPVRWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 249
Query: 153 G------KNSADQIYKIYGRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
G N D +++ L+ +NP+MRP+ E + P FR F
Sbjct: 250 GGLLDKPDNCPDMLFE-------LMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 301
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 10/115 (8%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDYVTTR 114
+ +QV +G+ ++ + HRDL N+L++ G + KI D G+ + I + ++YV
Sbjct: 172 SFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARHIKND---SNYVVKG 228
Query: 115 WYRAPEVLLLSE-----ICGPEVDRWAMGAIMFEMLSF-RILFPGKNSADQIYKI 163
R P + E + E D W+ G ++E+ S +PG + YK+
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKM 283
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 71/174 (40%), Gaps = 40/174 (22%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSS----LPCTDYV 111
+ ++ G+ Y++ + HRDL N +V++ +KIGD GM ++I + +
Sbjct: 137 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL 196
Query: 112 TTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLS--------------FRILFPG---- 153
RW +PE L + D W+ G +++E+ + R + G
Sbjct: 197 PVRWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD 254
Query: 154 --KNSADQIYKIYGRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
N D +++ L+ +NP+MRP+ E + P FR F
Sbjct: 255 KPDNCPDMLFE-------LMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 301
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 20/148 (13%)
Query: 13 IVKLRNLV--KEHEDVFIVFDYMESDLLKLMKESAGQNFSEDEARNLCF--QVFQGLHYM 68
IVK R + ++ +V +Y+ S L+ + D +R L + Q+ +G+ Y+
Sbjct: 70 IVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARL--DASRLLLYSSQICKGMEYL 127
Query: 69 HRQGYFHRDLKPSNLLV-SKGVIKIGDLGMVKEIDSSLPCTDYVTTR--------WYRAP 119
+ HRDL N+LV S+ +KI D G+ K + D R WY AP
Sbjct: 128 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLD---KDXXVVREPGQSPIFWY-AP 183
Query: 120 EVLLLSEICGPEVDRWAMGAIMFEMLSF 147
E L I + D W+ G +++E+ ++
Sbjct: 184 ES-LSDNIFSRQSDVWSFGVVLYELFTY 210
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKE-----SAGQNFSEDEARNLCFQVF 62
NH NIV+ + + FI+ + M DL ++E S + + + ++ +
Sbjct: 83 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 142
Query: 63 QGLHYMHRQGYFHRDLKPSN-LLVSKG---VIKIGDLGMVKEIDSSL-----PCTDYVTT 113
G Y+ + HRD+ N LL G V KIGD GM ++I + C +
Sbjct: 143 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA-MLPV 201
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSAD 158
+W P + I + D W+ G +++E+ S + +P K++ +
Sbjct: 202 KW--MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 245
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKE-----SAGQNFSEDEARNLCFQVF 62
NH NIV+ + + FI+ + M DL ++E S + + + ++ +
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSL-----PCTDYVTT 113
G Y+ + HRD+ N L++ V KIGD GM ++I + C +
Sbjct: 151 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA-MLPV 209
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSAD 158
+W P + I + D W+ G +++E+ S + +P K++ +
Sbjct: 210 KWM--PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 253
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKE-----SAGQNFSEDEARNLCFQVF 62
NH NIV+ + + FI+ + M DL ++E S + + + ++ +
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 63 QGLHYMHRQGYFHRDLKPSN-LLVSKG---VIKIGDLGMVKEIDSSL-----PCTDYVTT 113
G Y+ + HRD+ N LL G V KIGD GM ++I + C +
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA-MLPV 210
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSAD 158
+W P + I + D W+ G +++E+ S + +P K++ +
Sbjct: 211 KW--MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKE-----SAGQNFSEDEARNLCFQVF 62
NH NIV+ + + FI+ + M DL ++E S + + + ++ +
Sbjct: 108 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 167
Query: 63 QGLHYMHRQGYFHRDLKPSN-LLVSKG---VIKIGDLGMVKEIDSSL-----PCTDYVTT 113
G Y+ + HRD+ N LL G V KIGD GM ++I + C +
Sbjct: 168 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA-MLPV 226
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSAD 158
+W P + I + D W+ G +++E+ S + +P K++ +
Sbjct: 227 KW--MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 270
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKE-----SAGQNFSEDEARNLCFQVF 62
NH NIV+ + + FI+ + M DL ++E S + + + ++ +
Sbjct: 98 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 157
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSL-----PCTDYVTT 113
G Y+ + HRD+ N L++ V KIGD GM ++I + C +
Sbjct: 158 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA-MLPV 216
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSAD 158
+W P + I + D W+ G +++E+ S + +P K++ +
Sbjct: 217 KW--MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 260
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKE-----SAGQNFSEDEARNLCFQVF 62
NH NIV+ + + FI+ + M DL ++E S + + + ++ +
Sbjct: 118 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 177
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSL-----PCTDYVTT 113
G Y+ + HRD+ N L++ V KIGD GM ++I + C +
Sbjct: 178 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA-MLPV 236
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSAD 158
+W P + I + D W+ G +++E+ S + +P K++ +
Sbjct: 237 KW--MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 280
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 17/165 (10%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKE-----SAGQNFSEDEARNLCFQVF 62
NH NIV+ + + FI+ + M DL ++E S + + + ++ +
Sbjct: 132 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 191
Query: 63 QGLHYMHRQGYFHRDLKPSN-LLVSKG---VIKIGDLGMVKEIDSS----LPCTDYVTTR 114
G Y+ + HRD+ N LL G V KIGD GM ++I + + +
Sbjct: 192 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 251
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSAD 158
W P + I + D W+ G +++E+ S + +P K++ +
Sbjct: 252 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 294
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKE-----SAGQNFSEDEARNLCFQVF 62
NH NIV+ + + FI+ + M DL ++E S + + + ++ +
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 63 QGLHYMHRQGYFHRDLKPSNLLVS----KGVIKIGDLGMVKEIDSSL-----PCTDYVTT 113
G Y+ + HRD+ N L++ V KIGD GM ++I + C +
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA-MLPV 210
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSAD 158
+W P + I + D W+ G +++E+ S + +P K++ +
Sbjct: 211 KW--MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKE-----SAGQNFSEDEARNLCFQVF 62
NH NIV+ + + FI+ + M DL ++E S + + + ++ +
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 63 QGLHYMHRQGYFHRDLKPSN-LLVSKG---VIKIGDLGMVKEIDSSL-----PCTDYVTT 113
G Y+ + HRD+ N LL G V KIGD GM ++I + C +
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA-MLPV 224
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSAD 158
+W P + I + D W+ G +++E+ S + +P K++ +
Sbjct: 225 KW--MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKE-----SAGQNFSEDEARNLCFQVF 62
NH NIV+ + + FI+ + M DL ++E S + + + ++ +
Sbjct: 91 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 150
Query: 63 QGLHYMHRQGYFHRDLKPSN-LLVSKG---VIKIGDLGMVKEIDSSL-----PCTDYVTT 113
G Y+ + HRD+ N LL G V KIGD GM ++I + C +
Sbjct: 151 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA-MLPV 209
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSAD 158
+W P + I + D W+ G +++E+ S + +P K++ +
Sbjct: 210 KWM--PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 253
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 17/165 (10%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKE-----SAGQNFSEDEARNLCFQVF 62
NH NIV+ + + FI+ + M DL ++E S + + + ++ +
Sbjct: 109 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 168
Query: 63 QGLHYMHRQGYFHRDLKPSN-LLVSKG---VIKIGDLGMVKEIDSS----LPCTDYVTTR 114
G Y+ + HRD+ N LL G V KIGD GM ++I + + +
Sbjct: 169 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVK 228
Query: 115 WYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSAD 158
W P + I + D W+ G +++E+ S + +P K++ +
Sbjct: 229 W--MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 271
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKE-----SAGQNFSEDEARNLCFQVF 62
NH NIV+ + + FI+ + M DL ++E S + + + ++ +
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 63 QGLHYMHRQGYFHRDLKPSN-LLVSKG---VIKIGDLGMVKEIDSSL-----PCTDYVTT 113
G Y+ + HRD+ N LL G V KIGD GM ++I + C +
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA-MLPV 224
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSAD 158
+W P + I + D W+ G +++E+ S + +P K++ +
Sbjct: 225 KW--MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 69/167 (41%), Gaps = 26/167 (15%)
Query: 57 LCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSS----LPCTDYV 111
+ ++ G+ Y++ + HRDL N +V++ +KIGD GM ++I + +
Sbjct: 128 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLL 187
Query: 112 TTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY------- 164
RW +PE L + D W+ G +++E+ + S +Q+ +
Sbjct: 188 PVRWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLD 245
Query: 165 ------GRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
+ L+ +NP+MRP+ E + P FR F
Sbjct: 246 KPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 292
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKE-----SAGQNFSEDEARNLCFQVF 62
NH NIV+ + + FI+ + M DL ++E S + + + ++ +
Sbjct: 106 NHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 165
Query: 63 QGLHYMHRQGYFHRDLKPSN-LLVSKG---VIKIGDLGMVKEIDSSL-----PCTDYVTT 113
G Y+ + HRD+ N LL G V KIGD GM ++I + C +
Sbjct: 166 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCA-MLPV 224
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSAD 158
+W P + I + D W+ G +++E+ S + +P K++ +
Sbjct: 225 KW--MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 9 NHPNIVKLRNLVKEHEDVFIVFDYMES-DLLKLMKE-----SAGQNFSEDEARNLCFQVF 62
NH NIV+ + + FI+ + M DL ++E S + + + ++ +
Sbjct: 92 NHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIA 151
Query: 63 QGLHYMHRQGYFHRDLKPSN-LLVSKG---VIKIGDLGMVKEIDSSL-----PCTDYVTT 113
G Y+ + HRD+ N LL G V KIGD GM ++I + C +
Sbjct: 152 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCA-MLPV 210
Query: 114 RWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRIL-FPGKNSAD 158
+W P + I + D W+ G +++E+ S + +P K++ +
Sbjct: 211 KW--MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 34/172 (19%)
Query: 56 NLCFQVFQGLHYMHRQGYFHRDLKPSNLLVSKG-VIKIGDLGMVKEIDSSLPCTDY---- 110
+ ++ G+ Y++ + HRDL N V++ +KIGD GM ++I TDY
Sbjct: 129 QMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYE----TDYYRKG 184
Query: 111 ----VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSFRILFPGKNSADQIYKIY-- 164
+ RW +PE L + D W+ G +++E+ + S +Q+ +
Sbjct: 185 GKGLLPVRWM-SPES-LKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVME 242
Query: 165 -----------GRWVALISWLCSWNPRMRPTAAEALE------HPFFRSCHF 199
+ L+ +NP+MRP+ E + P FR F
Sbjct: 243 GGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSF 294
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 70/158 (44%), Gaps = 20/158 (12%)
Query: 9 NHPNIVKLRNLVKEHE----DVFIVFDYME----SDLLKLMKESAGQ--NFSEDEARNLC 58
H NI++ K D++++ + E SD LK S + + +E AR L
Sbjct: 76 KHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLA 135
Query: 59 F--QVFQGLHYMHRQGYFHRDLKPSNLLVSKGVIK-IGDLGMVKEIDSSLPCTD---YVT 112
+ + GL H+ HRD+K N+L+ + I D G+ + ++ D V
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVG 195
Query: 113 TRWYRAPEVLL----LSEICGPEVDRWAMGAIMFEMLS 146
TR Y APEVL +D +AMG +++E+ S
Sbjct: 196 TRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 57/119 (47%), Gaps = 15/119 (12%)
Query: 36 DLLKLMKESAGQNFSEDEARNLCFQVFQGLHYMHRQGYFHRDLKPSNLLV-SKGVIKIGD 94
D ++ K++ G + N C Q+ +G++Y+ + HRDL N+LV + +KI D
Sbjct: 102 DYVREHKDNIGSQY----LLNWCVQIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITD 157
Query: 95 LGMVKEIDSSLPCTDY------VTTRWYRAPEVLLLSEICGPEVDRWAMGAIMFEMLSF 147
G+ K + + +Y V +W + L I + D W+ G ++E+++F
Sbjct: 158 FGLAKLLGAEE--KEYHAEGGKVPIKWMALESI--LHRIYTHQSDVWSYGVTVWELMTF 212
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.325 0.137 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,832,425
Number of Sequences: 62578
Number of extensions: 345105
Number of successful extensions: 3909
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 170
Number of HSP's that attempted gapping in prelim test: 1129
Number of HSP's gapped (non-prelim): 1394
length of query: 297
length of database: 14,973,337
effective HSP length: 98
effective length of query: 199
effective length of database: 8,840,693
effective search space: 1759297907
effective search space used: 1759297907
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 51 (24.3 bits)