Query 040213
Match_columns 764
No_of_seqs 201 out of 776
Neff 5.0
Searched_HMMs 46136
Date Fri Mar 29 06:12:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040213.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040213hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00151 potassium transporter 100.0 8E-241 2E-245 2037.0 65.5 746 14-764 66-852 (852)
2 PLN00150 potassium ion transpo 100.0 1E-240 3E-245 2036.3 64.8 748 9-764 6-779 (779)
3 PLN00148 potassium transporter 100.0 2E-236 4E-241 2003.7 63.0 736 28-764 1-785 (785)
4 PLN00149 potassium transporter 100.0 8E-236 2E-240 2000.7 64.8 735 28-764 1-779 (779)
5 TIGR00794 kup potassium uptake 100.0 4E-223 1E-227 1885.1 57.9 667 52-764 1-688 (688)
6 PRK10745 trkD potassium transp 100.0 4E-211 9E-216 1763.2 53.9 599 40-764 3-622 (622)
7 COG3158 Kup K+ transporter [In 100.0 4E-202 9E-207 1651.0 48.8 593 48-764 14-627 (627)
8 PF02705 K_trans: K+ potassium 100.0 5E-192 1E-196 1597.6 40.8 514 53-605 1-534 (534)
9 TIGR00911 2A0308 L-type amino 92.6 0.36 7.9E-06 55.5 8.3 47 202-248 165-214 (501)
10 COG0531 PotE Amino acid transp 82.3 14 0.0003 41.4 12.0 176 201-381 133-324 (466)
11 PRK10655 potE putrescine trans 76.2 68 0.0015 36.3 15.2 42 205-246 126-170 (438)
12 PRK10435 cadB lysine/cadaverin 74.5 73 0.0016 36.2 14.9 22 206-227 125-146 (435)
13 TIGR03813 put_Glu_GABA_T putat 70.3 55 0.0012 37.6 12.8 19 481-499 434-452 (474)
14 TIGR00909 2A0306 amino acid tr 70.2 29 0.00063 38.9 10.4 167 205-381 136-316 (429)
15 PF13520 AA_permease_2: Amino 68.8 25 0.00055 39.2 9.5 223 202-437 118-366 (426)
16 PF06570 DUF1129: Protein of u 66.5 24 0.00052 36.5 8.0 21 480-500 179-199 (206)
17 PRK15049 L-asparagine permease 61.6 1.3E+02 0.0029 35.0 13.9 22 205-226 147-168 (499)
18 TIGR00907 2A0304 amino acid pe 59.0 60 0.0013 37.3 10.3 21 481-501 454-474 (482)
19 TIGR00930 2a30 K-Cl cotranspor 52.8 6.2E+02 0.013 32.6 19.1 32 202-234 203-234 (953)
20 PRK10238 aromatic amino acid t 52.7 1.5E+02 0.0033 33.9 12.3 43 276-319 206-250 (456)
21 PRK11021 putative transporter; 52.1 3.7E+02 0.008 30.2 15.0 29 201-229 114-142 (410)
22 PF14362 DUF4407: Domain of un 50.0 1.3E+02 0.0027 32.8 10.5 54 421-474 14-71 (301)
23 TIGR00905 2A0302 transporter, 47.3 1.6E+02 0.0034 33.9 11.3 43 340-382 279-321 (473)
24 TIGR00908 2A0305 ethanolamine 47.1 1.6E+02 0.0034 33.4 11.1 23 205-227 124-146 (442)
25 COG4059 MtrE Tetrahydromethano 46.9 20 0.00042 38.1 3.5 31 477-507 258-288 (304)
26 TIGR00910 2A0307_GadC glutamat 43.3 2.8E+02 0.006 32.6 12.6 51 273-323 197-249 (507)
27 TIGR02230 ATPase_gene1 F0F1-AT 39.0 1.1E+02 0.0024 28.8 6.7 59 172-247 37-95 (100)
28 KOG4742 Predicted chitinase [G 37.2 15 0.00034 40.1 1.1 34 292-334 171-210 (286)
29 TIGR00906 2A0303 cationic amin 37.0 6.2E+02 0.014 30.1 14.4 44 202-245 161-207 (557)
30 PRK10249 phenylalanine transpo 36.1 5.5E+02 0.012 29.5 13.4 97 206-306 139-247 (458)
31 PRK11387 S-methylmethionine tr 29.0 7E+02 0.015 28.7 12.7 31 41-77 13-43 (471)
32 TIGR01773 GABAperm gamma-amino 28.6 9.1E+02 0.02 27.4 14.9 45 204-248 128-175 (452)
33 KOG3643 GABA receptor [Signal 28.4 42 0.0009 38.9 2.6 64 375-442 225-292 (459)
34 PRK11049 D-alanine/D-serine/gl 28.1 3.7E+02 0.0081 30.9 10.3 104 278-382 219-333 (469)
35 PF02660 G3P_acyltransf: Glyce 28.0 4.5E+02 0.0097 26.8 9.7 83 413-505 91-175 (178)
36 PRK10746 putative transport pr 27.6 6.5E+02 0.014 29.0 12.2 30 43-78 11-40 (461)
37 KOG3145 Cystine transporter Cy 27.0 1.1E+02 0.0025 34.0 5.5 84 203-301 234-339 (372)
38 PRK10580 proY putative proline 26.8 4.6E+02 0.01 29.9 10.8 24 479-502 423-446 (457)
39 PRK10644 arginine:agmatin anti 26.3 4.2E+02 0.0091 30.1 10.3 23 205-227 128-150 (445)
40 TIGR03428 ureacarb_perm permea 25.8 1.1E+03 0.023 27.2 17.7 26 202-227 144-169 (475)
41 PF08733 PalH: PalH/RIM21; In 25.4 3.6E+02 0.0079 30.4 9.3 140 362-510 168-326 (348)
42 TIGR03810 arg_ornith_anti argi 24.6 1.1E+03 0.024 27.0 16.1 44 339-382 274-317 (468)
43 PRK11357 frlA putative fructos 24.2 1.1E+03 0.023 26.8 13.3 53 194-246 119-174 (445)
44 PF05545 FixQ: Cbb3-type cytoc 22.0 90 0.0019 25.1 2.8 27 491-517 21-47 (49)
45 COG2179 Predicted hydrolase of 20.8 29 0.00063 35.5 -0.3 72 687-762 46-120 (175)
46 PLN00083 photosystem II subuni 20.3 71 0.0015 29.5 2.0 33 65-103 56-88 (101)
No 1
>PLN00151 potassium transporter; Provisional
Probab=100.00 E-value=8.1e-241 Score=2037.04 Aligned_cols=746 Identities=46% Similarity=0.831 Sum_probs=679.5
Q ss_pred CCcceeeccccCcccchhhhccccccccc--hhhHHHHHHHHhhhcceEecccccchhhhhhccCCC-CCCCccceehhh
Q 040213 14 KGQVWFVNHKFDHLVDEEAERHSDANVKN--RLSALLLMRFAFKSLGVVYGDLGTSPMYVLYNTFPD-GIKDTEDVIDAL 90 (764)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~La~~alGVVyGDIGTSPLY~~~~~f~~-~~~~~~~vlGvl 90 (764)
+||||++++|+|+ ||.|+++++++++|+ +.++|.++.|||||||||||||||||||||+++|++ +.++++||+|+|
T Consensus 66 ~~~~~~~~~~~d~-~~~e~~~~~~~~~~~~~~~~~w~~l~La~qslGVVyGDIGTSPLYv~~s~F~~~~~~~~~dIlGvL 144 (852)
T PLN00151 66 RRRLIRTPPRVDS-FDVEAMEIPGAHRHDSEDLSVGRTLALAFQTLGVVFGDVGTSPLYTFSVMFSKVPIKSEEDVLGAL 144 (852)
T ss_pred hhhHhhCCCccch-hhhcccccccccccccccccHHHHHHHHHhhhceEeCcCCCCHHHHHHHHhcCCCCCChhheeeeh
Confidence 6999999999999 999999987765433 557777799999999999999999999999999976 346999999999
Q ss_pred HHHHHHHHHhhhheeeEEEEEecCCCCchHHHHHHHHhhccccccCCCCCCCchhhhhccccc-ccccchhhHhHHHhhh
Q 040213 91 SLIIYTLTIIPLIKYVLIVCRANDNGQGGTFALYSLLCRHAKLRTIPNQDRSDEELTTYSRST-FHERSHAAKTKRWLEK 169 (764)
Q Consensus 91 SLIfWtL~liv~iKYv~ivl~adn~GEGG~~AL~sL~~r~~~~~~~~~~~~~d~~l~~~~~~~-~~~~~~~~~~~~~le~ 169 (764)
||||||||||+++|||+|||||||||||||||||||+|||+|++++|||+++|+++++|+.+. +++.+++.++|++|||
T Consensus 145 SLIfWtLtLiv~iKYV~iVLrAdd~GEGGtfALySLl~R~a~~~llpnq~~~de~ls~~~~~~~~~~~~~~~~~k~~lE~ 224 (852)
T PLN00151 145 SLVLYTLILIPLAKYVLVVLWANDDGEGGTFALYSLICRHAKVSLLPNQLPSDERISSFRLKLPTPELERSLKIKERLET 224 (852)
T ss_pred HHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhcCcCccccccchHhhhhhhcccCCccccchhHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999999999999999999887 5677788899999999
Q ss_pred ccchhHHHHHHHHHhhhhhccCccccCccc-----------------cchhhhHHHHHHHHHHhhcccccccccchhhHH
Q 040213 170 HSCSKIVLLVLVLVGSSMVIGDGILTPAIS-----------------EAVVLVAVAILVVLFSVQHFGVDKVGWLFAPIV 232 (764)
Q Consensus 170 ~~~~~~~l~~l~l~G~~l~~gDgviTPAiS-----------------~~Vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm 232 (764)
|+++|.+++++|++|+||+||||+|||||| ++||||||+||++||++||+||+|||++|||||
T Consensus 225 s~~~k~~ll~l~l~GtamviGDGvlTPAISVLSAVeGL~v~~p~l~~~~VV~Is~~ILv~LF~~Q~~GT~kVg~~FgPIm 304 (852)
T PLN00151 225 SSLLKKLLLLLVLAGTSMVIGDGVLTPAMSVMSAVSGLKVGVPGFGQDAVVMISVAFLVILFSVQRFGTSKVGFAFGPAL 304 (852)
T ss_pred hHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccCCcCCCCeehhHHHHHHHHHHHHHhccchhhhhhhccHH
Confidence 999999999999999999999999999999 679999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccCcceeEecCHHHHHHHHHhc--CchhhccceeeeeccchhhhccCCCCCccceeeehhhhhh
Q 040213 233 FVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFRKG--HTWPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVY 310 (764)
Q Consensus 233 ~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~--~g~~~LG~V~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~ 310 (764)
++||++|+++|+|||++|||+||+||||+|+++||.+| .||.+||+|+||+||+|||||||||||++|||+||+++||
T Consensus 305 llWFl~i~~iGiynI~~~~p~Vl~AlnP~Y~~~Ff~~~~~~gw~~LGgVvLciTGaEALfADLGHFg~~sIqiaw~~~V~ 384 (852)
T PLN00151 305 ALWFCSLGGIGIYNLVKYDSSVFRAFNPVYIYYFFKRNSTKAWSALGGCVLCATGSEAMFADLGYFSVRSIQLAFTCLVL 384 (852)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHhhhCHHHHHHHHHhCCCceEEEecceeeeeccchhhhcccCCCCccceeeeehhhHH
Confidence 99999999999999999999999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHhhccchhhhccCCccccCcceecccCcchHHHHHHHHHHHHHHHhHHhhhhhhHHHHHHHcCCCCceeEEecCCC
Q 040213 311 PCLLLAYIGQAAYLMKKPDHVHDVFYRSIPDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKK 390 (764)
Q Consensus 311 P~L~l~Y~GQgA~Ll~~p~~~~npF~~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~~Pr~~i~hTS~~ 390 (764)
|||+|||+||||||++||++.+||||+++|+|++||+|++||+||||||||+|||+||+++||++||||||+||+|||++
T Consensus 385 P~LlL~Y~GQaA~L~~~p~~~~npFy~svP~~~~wP~~vlAtlAaIIASQA~ISgtFSii~Qai~Lg~fPRvkIvHTS~~ 464 (852)
T PLN00151 385 PCLLLAYMGQAAYLMKNPDSAEQIFFSSVPSSLFWPVFLIANLAALIASRAMTTATFSCIKQSMALGCFPRLKIIHTSRK 464 (852)
T ss_pred HHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEeCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccchhhHHHHHHHhheeEEeecCchhhhhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Q 040213 391 YSSHIYIPEINWILMILCVAVTAGFKNQHQIGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYF 470 (764)
Q Consensus 391 ~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~ 470 (764)
++||||||+|||+||++|+++|++||||++||||||+||++||++||+|+++||+.+|||+++++++|+++|+++|++||
T Consensus 465 ~~GQIYIP~vNw~Lmv~~i~v~l~F~~s~~l~~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~ 544 (852)
T PLN00151 465 FMGQIYIPVINWFLLVMCLVVVCSFRSITDIGNAYGIAEVGVMMVSTILVTLVMLLIWQTNIFLVLCFPVVFLSVELVFF 544 (852)
T ss_pred cCCceeeHHHHHHHHHHHHhheeeecCHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccccCchHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCCChHHHHhcCCCCCCcccCceEEEEecCCCCcchhHH
Q 040213 471 SAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQSKVPIEWILGLGPSLGLVRVPGVGLVYSELANGVPHIFA 550 (764)
Q Consensus 471 sanl~Ki~~GGW~pl~ia~~~~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~ 550 (764)
|||+.||+||||+||++|++++++|++||||++++++++.++++|+++|.++.++.++.||||+|+|||++.+|+|++|.
T Consensus 545 sA~l~Ki~~GGW~Pl~la~v~~~iM~~W~yG~~~~~~~~~~~~vs~~~~~~L~~~~~~~RVpGiglf~t~~~~gvP~~f~ 624 (852)
T PLN00151 545 SSVLSSVGDGGWIPLVFASVFLCIMYIWNYGSKLKYQSEVRQKLSMDLMRELGSNLGTIRAPGIGLLYNELVKGIPAIFG 624 (852)
T ss_pred HHHHHhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999988888888999999999999999999999
Q ss_pred HHHhhcCccceEEEEEEEEEeeeeccCCCeEEEEEEeCCCCCCEEEEEEEeeeccCCC-CchHHHHHHHHHHHHHHhhhc
Q 040213 551 HFITNLPAIHSVVIFVCVKYIPVYTVPEGERFLVTRVGPKSFHMFHCAARYGYKDLHK-RDDEFEKNLFENLFRFMRLES 629 (764)
Q Consensus 551 h~l~~n~~lHe~vVfltV~~~~vP~V~~~eR~~v~~l~~~~~g~yRv~vrYGYmE~~~-ip~~Fe~~lv~~L~~fI~~e~ 629 (764)
||++|||++||++||||||++|+|+||++||+++++++++++|+|||++||||||..+ ++++||++|+++|++||++|+
T Consensus 625 h~i~~~~alHe~~Vfv~ik~~~vP~V~~~eR~lv~ri~~~~~~~yr~vvrYGY~D~~~~~~~dFe~~Lv~~l~~fi~~e~ 704 (852)
T PLN00151 625 HFLTTLPAIHSTIIFVCIKYVPVPVVPQEERFLFRRVCPKDYHMFRCIARYGYKDVRKENHQAFEQLLIESLEKFIRREA 704 (852)
T ss_pred HHHHhCCcccceEEEEEEEECcccccChhheEEEEEcCCCCCCEEEEEEEEeecccccccchHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999999986 789999999999999999987
Q ss_pred ccccccccC----------CcCCCCCCCCCCCCCCC----CCCCcccccCC--CCc-cccCCCCcccccccCcccCchhh
Q 040213 630 LMDSCMASE----------VYSPCDQGDSKDDANLP----DPHKVTTTFSP--NSI-VSVVSPEYTVRTMSSSQMISQDE 692 (764)
Q Consensus 630 ~~~~~~~~~----------~~~~~~~~~~~~~~~l~----~~~~~~~~~~~--~~~-~s~~~~~~~l~f~~~s~~~~~~v 692 (764)
.+..+++++ +++.....++.....+. .+...++.... ..+ +...+..+++++ ++.++++
T Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 780 (852)
T PLN00151 705 QERALESDGNDDTDDEDSVTSSRVLIAPNGSVYSLGVPLLADYRLTSKPIPEASTSEEVSPVLPSSSMS----SDEDQSL 780 (852)
T ss_pred hhccccccccccccccccccccccccCCCcccccccccccccccccccccccccccccccccccccccc----cccCccH
Confidence 532211111 01111100000000000 00000000000 000 000000011222 2335689
Q ss_pred HHHHHHHhhhhcCCcEEEEeecEEEecCCChhhHHHHHHHHHHHHhhhccccccccccCCCCeEEeeeEEEC
Q 040213 693 IDELEFLTNSRDTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRENNAIFYCPRECLLNVGQVIIV 764 (764)
Q Consensus 693 ~~El~~L~~A~e~gvvY~LGr~~V~a~~~S~~~kk~~in~lF~FLrrN~R~~~~~l~IP~~rvVEVGm~yeI 764 (764)
+||+++|++|+|+|++|++||++|+|+++|+|+||+++|++|+|||||||++...|+|||+|++||||+|+|
T Consensus 781 ~~El~~l~~a~e~Gv~yilG~~~v~a~~~S~~~Kk~~in~~Y~fLRkN~R~~~~~L~iP~~~lleVGm~Y~v 852 (852)
T PLN00151 781 EYELSFIREAKESGVVYLLGHGDVRARKNSWFIKKLVINYFYAFLRKNCRRGIANLSVPHSNIMQVGMTYMV 852 (852)
T ss_pred HHHHHHHHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999997
No 2
>PLN00150 potassium ion transporter family protein; Provisional
Probab=100.00 E-value=1.4e-240 Score=2036.32 Aligned_cols=748 Identities=52% Similarity=0.930 Sum_probs=682.7
Q ss_pred ccCCCCCcceeeccccCcccchhhhccccccccchhhHHHHHHHHhhhcceEecccccchhhhhhccCCC-CCCCcccee
Q 040213 9 EDTDNKGQVWFVNHKFDHLVDEEAERHSDANVKNRLSALLLMRFAFKSLGVVYGDLGTSPMYVLYNTFPD-GIKDTEDVI 87 (764)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~La~~alGVVyGDIGTSPLY~~~~~f~~-~~~~~~~vl 87 (764)
.+++|+||||++++|+|+|||+||++++++...++.+|+.++.||+||||||||||||||||||+++|++ +.+++|||+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~il 85 (779)
T PLN00150 6 ISESNQGRLWDLDQRITRPLGVDADSVRSMYFSSPNWPKVIMHLAYQSLGVVYGDLGTSPLYVFKSTFANVGVKNNDDII 85 (779)
T ss_pred ecCCCccchhhCCCCCCCccCcchhhcccccccccccHHHHHHHHHhccCeEeCcCccchHHHHHHHhcCCCCCCHHHhH
Confidence 4567899999999999999999999999987777889999999999999999999999999999999976 468999999
Q ss_pred hhhHHHHHHHHHhhhheeeEEEEEecCCCCchHHHHHHHHhhccccccCCCCCCCchhhhhcccccccccchhhHhHHHh
Q 040213 88 DALSLIIYTLTIIPLIKYVLIVCRANDNGQGGTFALYSLLCRHAKLRTIPNQDRSDEELTTYSRSTFHERSHAAKTKRWL 167 (764)
Q Consensus 88 GvlSLIfWtL~liv~iKYv~ivl~adn~GEGG~~AL~sL~~r~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~l 167 (764)
|+|||||||||||+++|||+|||||||||||||||||||+|||+|++++|||+..|+++++|+.+ +..+..++|++|
T Consensus 86 GvLSLIfWtLtLiv~iKYV~ivLrAdn~GEGGtfALysLl~r~aki~l~~~~~~~~~~~s~~~~~---~~~r~~~~k~~l 162 (779)
T PLN00150 86 GALSLIIYTLTIIPLIKYVFIVLRANDNGEGGSFALYSLLCRYCNISLLPNQHPTDVELTTYVVD---NMNRKTRIQRKL 162 (779)
T ss_pred hHHHHHHHHHHHHHHHhheeEEEEccCCCCcchhhHHHHHhhhcccccCCccccchhhhhhcccc---cchhhhHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999998753 334456799999
Q ss_pred hhccchhHHHHHHHHHhhhhhccCccccCccc-----------------cchhhhHHHHHHHHHHhhcccccccccchhh
Q 040213 168 EKHSCSKIVLLVLVLVGSSMVIGDGILTPAIS-----------------EAVVLVAVAILVVLFSVQHFGVDKVGWLFAP 230 (764)
Q Consensus 168 e~~~~~~~~l~~l~l~G~~l~~gDgviTPAiS-----------------~~Vv~is~~ILv~LF~~Q~~GT~kvg~~FgP 230 (764)
|+++..|++++++|++|+||+||||+|||||| ++|+||||+||++||++||+||+|||++|||
T Consensus 163 E~~~~~~~~l~~l~l~G~~m~~gDgviTPAISVLSAVeGL~v~~p~l~~~~Vv~is~~ILv~LF~iQ~~GT~kVg~~FgP 242 (779)
T PLN00150 163 ENSRVWQNVLLLIVLLGTCMVIGDGILTPSISVLSAVVGIKAASSGLDTNLVTIISCVILVILFSLQRFGTHKVSFLFAP 242 (779)
T ss_pred hcchHHHHHHHHHHHHHHHHHhcccccccchhhhhhhccccccCCCCCCCeehhhHHHHHHHHHHHHhccchhhhhhhcc
Confidence 99998999999999999999999999999999 6899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCcceeEecCHHHHHHHHHhc--CchhhccceeeeeccchhhhccCCCCCccceeeehhhh
Q 040213 231 IVFVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFRKG--HTWPSLGSIILCITGTEALFADVCQFPVLSIQIAFATV 308 (764)
Q Consensus 231 Im~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~--~g~~~LG~V~L~iTG~EALyADmGHFg~~~Ir~aw~~~ 308 (764)
||++||++||++|+|||++|||+||+|+||+|+++||.+| .||.+||+|+||+||+|||||||||||++|||+||+++
T Consensus 243 Im~~Wf~~i~~iGiyni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LG~V~L~iTGaEALyADlGHFg~~~Iriaw~~~ 322 (779)
T PLN00150 243 IFLCWFFSLALIGCYNIIKWDKSVFLAFNPLYIVSFFIRNGRQGWESLGGIVLCMTGTEAMFADLGHFTVKSMQIAFTSL 322 (779)
T ss_pred HHHHHHHHHHHHHHHHHHhcCHHHHhhcCHHHHHHHHHhCCCceEEEecceeeeecchhhhhccccCCCccceeeeehhh
Confidence 9999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred hhHHHHHhhccchhhhccCCccccCcceecccCcchHHHHHHHHHHHHHHHhHHhhhhhhHHHHHHHcCCCCceeEEecC
Q 040213 309 VYPCLLLAYIGQAAYLMKKPDHVHDVFYRSIPDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTS 388 (764)
Q Consensus 309 V~P~L~l~Y~GQgA~Ll~~p~~~~npF~~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~~Pr~~i~hTS 388 (764)
|||||+|||+||||||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||
T Consensus 323 V~P~LlL~Y~GQaA~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkI~hTS 402 (779)
T PLN00150 323 VYPCLLLTYLGQAAYLVKHMEDVNDPFYRSLPKPIYWPIFVLATCSAMIASQAMISATFSIVKQAMALGCFPRVKIVHTS 402 (779)
T ss_pred HHHHHHHHHcchHHHHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCCcccchhhHHHHHHHhheeEEeecCchhhhhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q 040213 389 KKYSSHIYIPEINWILMILCVAVTAGFKNQHQIGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGT 468 (764)
Q Consensus 389 ~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ 468 (764)
++++||||||+|||+||++|+++|++||||++||||||+||++||++||+|+++||+.+|||+++++++|+++|+++|++
T Consensus 403 ~~~~GQIYIP~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~~v~~~~W~~~~~~~~~f~~~f~~ie~~ 482 (779)
T PLN00150 403 NKVHGQVYIPEINWILMVLCLVITAGFRDTDEIGNAYGIAVVGVMIITTCLMTLVMIIIWRKHILLALLFFTVFAIIEGI 482 (779)
T ss_pred cccCCceeeHHHHHHHHHHHHhheEEecChHHHHHHhhhheehhhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhccccCchHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCCChHHHHhcCCCCCCcccCceEEEEecCCCCcchh
Q 040213 469 YFSAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQSKVPIEWILGLGPSLGLVRVPGVGLVYSELANGVPHI 548 (764)
Q Consensus 469 f~sanl~Ki~~GGW~pl~ia~~~~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~ 548 (764)
|||||+.||+||||+||++|++++++|++|+||++++++++.++++|+++|.+..++.++.||||+|+|||++.+|+|++
T Consensus 483 f~sa~l~Ki~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~ 562 (779)
T PLN00150 483 YFSAVLFKVTQGGWVPLVIAAVFGTVMYTWHYGTRKRYLYEMQHKVSVGWLLGLGPSLGLVRVPGIGLMYTDLAHGVPPL 562 (779)
T ss_pred HHHHHHhhhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHhhcccCCCcccCcEEEEEeCCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999987777777889999999999999999999
Q ss_pred HHHHHhhcCccceEEEEEEEEEeeeeccCCCeEEEEEEeCCCCCCEEEEEEEeeeccCCCCchHHHHHHHHHHHHHHhhh
Q 040213 549 FAHFITNLPAIHSVVIFVCVKYIPVYTVPEGERFLVTRVGPKSFHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLE 628 (764)
Q Consensus 549 ~~h~l~~n~~lHe~vVfltV~~~~vP~V~~~eR~~v~~l~~~~~g~yRv~vrYGYmE~~~ip~~Fe~~lv~~L~~fI~~e 628 (764)
|.||++|||++||++|||||+++|+|+||++||+++++++++++++|||++||||||..+++++||++|+++|++||++|
T Consensus 563 f~h~v~~~~~lhe~~Vfl~i~~~~vP~V~~~eR~~v~~i~~~~~r~~r~vvryGy~d~~~d~~dFE~~LvesL~~FIr~e 642 (779)
T PLN00150 563 FSHFITNLPAIHSTVVFVCIKYLPVNTVPQDERFLIRRIGPRAYSMYRCAARYGYTDLEKKDDNFEQLLIASLERFIEIE 642 (779)
T ss_pred HHHHHHhCCcccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcCcccchHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999888899999999999999889999999999999999998
Q ss_pred cccccccccCCcCCCCCCCCC-CCCCCC-CCC--CcccccC--CCCccccCCCCcccccccCcccCchhhHHHHHHHhhh
Q 040213 629 SLMDSCMASEVYSPCDQGDSK-DDANLP-DPH--KVTTTFS--PNSIVSVVSPEYTVRTMSSSQMISQDEIDELEFLTNS 702 (764)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~-~~~~l~-~~~--~~~~~~~--~~~~~s~~~~~~~l~f~~~s~~~~~~v~~El~~L~~A 702 (764)
+.+...++ ++++..++..+. .+.+-. ... ..+.+.. .+..+...+..++.++ ++.+++++||+++|++|
T Consensus 643 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~eEl~~L~~A 717 (779)
T PLN00150 643 SFREQSDL-ESMAASWTPEELMGEGNSVGSGLFTQYDQSDINFATSQEWKRPSSQEDSV----SGHSSDTQDEVAFLNKC 717 (779)
T ss_pred hhcccccc-cccccccccccccccCCccccccccccccccccccccccccccccccccc----ccccccHHHHHHHHHHH
Confidence 75322111 112211111100 000000 000 0000000 0000000011112222 22356899999999999
Q ss_pred hcCCcEEEEeecEEEecCCChhhHHHHHHHHHHHHhhhccccccccccCCCCeEEeeeEEEC
Q 040213 703 RDTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRENNAIFYCPRECLLNVGQVIIV 764 (764)
Q Consensus 703 ~e~gvvY~LGr~~V~a~~~S~~~kk~~in~lF~FLrrN~R~~~~~l~IP~~rvVEVGm~yeI 764 (764)
+|+||+|++||++|+|+++|+|+||+++|++|+|||||||++...|+|||+|++||||+|||
T Consensus 718 ~eaGVvYIlG~~~v~Ak~~Ss~~KK~vIN~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~V 779 (779)
T PLN00150 718 KEAGVVYILGNNDVKARKDSGFFKKVIINYIYTFLRRISRDSEVVLNIPHECLLKVGMVYYV 779 (779)
T ss_pred HHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCCccccCCChHHeEEeceEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999997
No 3
>PLN00148 potassium transporter; Provisional
Probab=100.00 E-value=1.8e-236 Score=2003.67 Aligned_cols=736 Identities=47% Similarity=0.837 Sum_probs=665.0
Q ss_pred cchhhhccccccccchhhHHH---HHHHHhhhcceEecccccchhhhhhccCCCC---CCCccceehhhHHHHHHHHHhh
Q 040213 28 VDEEAERHSDANVKNRLSALL---LMRFAFKSLGVVYGDLGTSPMYVLYNTFPDG---IKDTEDVIDALSLIIYTLTIIP 101 (764)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~---~~~La~~alGVVyGDIGTSPLY~~~~~f~~~---~~~~~~vlGvlSLIfWtL~liv 101 (764)
||+|+|..+.++ ++..+|+. ++.|+|||||||||||||||||||+++|+++ .+++|||+|+|||||||||||+
T Consensus 1 ~~~~~~~~~~~~-~~~~~w~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~F~~~~~~~~~~~~ilGvLSLIfWtLtLiv 79 (785)
T PLN00148 1 MEAESGVSPSRN-PSQLSWVNLSRNLLLAYQSFGVVYGDLSTSPLYVYKSTFSGKLQKHQNEETIFGAFSLIFWTFTLIP 79 (785)
T ss_pred CCcccCCCCCCC-CCcchhhHHhHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHHHhHHHHHHHHHHHHH
Confidence 577776553321 21225655 7899999999999999999999999999752 4899999999999999999999
Q ss_pred hheeeEEEEEecCCCCchHHHHHHHHhhccccccCCCCCCCchhhhhcccccccccchhhHhHHHhhhccchhHHHHHHH
Q 040213 102 LIKYVLIVCRANDNGQGGTFALYSLLCRHAKLRTIPNQDRSDEELTTYSRSTFHERSHAAKTKRWLEKHSCSKIVLLVLV 181 (764)
Q Consensus 102 ~iKYv~ivl~adn~GEGG~~AL~sL~~r~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~ 181 (764)
++|||+|||||||||||||||||||+||++|++++|||+++|+++++|+.+.....+++.++|++||+|++.|.+++++|
T Consensus 80 ~iKYV~ivlrAdn~GEGG~fALysLl~r~~~~~~~pn~~~~d~~ls~~~~~~~~~~~~~~~~k~~lE~~~~~~~~ll~l~ 159 (785)
T PLN00148 80 LLKYVTILLSADDNGEGGTFALYSLLCRHAKLSLLPNQQAADEELSAYKYGPSTQTVGSSPLKRFLEKHKRLRTALLLVV 159 (785)
T ss_pred HHhheEEEEEecCCCCchHHHHHHHHHHhcccccCccchhhhhhhhhhccCccccchhhhHHHHHhhhchHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988665445667889999999999999999999
Q ss_pred HHhhhhhccCccccCccc-----------------cchhhhHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHH
Q 040213 182 LVGSSMVIGDGILTPAIS-----------------EAVVLVAVAILVVLFSVQHFGVDKVGWLFAPIVFVWFLLIGGIGI 244 (764)
Q Consensus 182 l~G~~l~~gDgviTPAiS-----------------~~Vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~l~~~Gi 244 (764)
++|+||+||||+|||||| ++|+||||+||++||++||+||+|||++|||||++||++||++|+
T Consensus 160 l~G~am~~gDgvlTPAISVLSAVeGl~v~~p~~~~~~vv~is~~ILv~LF~vQ~~GT~kVg~~FgPIm~lWf~~i~~iGi 239 (785)
T PLN00148 160 LFGACMVIGDGVLTPAISVLSSVSGLQVTETKLTDGELVLLACVILVGLFALQHCGTHRVAFMFAPIVIIWLLSIGSIGL 239 (785)
T ss_pred HHHHHHHHhccccchhHHHHHHhccceecCCCCCCCeehhHHHHHHHHHHHHhccccHHHHhhhhhHHHHHHHHHHHHHH
Confidence 999999999999999999 689999999999999999999999999999999999999999999
Q ss_pred HhhcccCcceeEecCHHHHHHHHHhc--CchhhccceeeeeccchhhhccCCCCCccceeeehhhhhhHHHHHhhccchh
Q 040213 245 INIWKYDSSVLKAFSPVHVYWFFRKG--HTWPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAA 322 (764)
Q Consensus 245 ~~I~~~~P~Vl~AlnP~ya~~f~~~~--~g~~~LG~V~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~L~l~Y~GQgA 322 (764)
|||++|||+||+|+||+|+++||.+| .||.+||+|+||+||+|||||||||||++|||+||+++|||||+|||+||||
T Consensus 240 yni~~~~p~Vl~AlnP~y~~~ff~~~~~~g~~~LGgV~L~iTGaEALyADlGHFg~~~Iriaw~~~V~P~L~L~Y~GQaA 319 (785)
T PLN00148 240 YNIIHWNPKIIHALSPYYIIKFFRVTGKDGWISLGGILLSITGTEAMFADLGHFTAASIRLAFATVIYPCLVVQYMGQAA 319 (785)
T ss_pred HHHHhcCHHHhhhcCHHHHHHHHHhCCCceEEeecchheeccchhhhhhhccCCCccceEEeeeehHHHHHHHHHcchHH
Confidence 99999999999999999999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCccccCcceecccCcchHHHHHHHHHHHHHHHhHHhhhhhhHHHHHHHcCCCCceeEEecCCCcCCcccchhhHH
Q 040213 323 YLMKKPDHVHDVFYRSIPDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIPEINW 402 (764)
Q Consensus 323 ~Ll~~p~~~~npF~~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~~Pr~~i~hTS~~~~GQIYIP~vNw 402 (764)
||++||++.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||
T Consensus 320 ~ll~~p~~~~npFf~~iP~~~~~P~~vlAtlAtIIASQA~ISg~FSi~~Qai~Lg~fPrvkIvhTS~~~~GQIYIP~vNw 399 (785)
T PLN00148 320 FLSKNIPSIPNSFYDSIPDPVFWPVFVIATLAAIVGSQAVITATFSIVKQCHALGCFPRVKVVHTSKHIYGQIYIPEINW 399 (785)
T ss_pred HHhcCcccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhheeEEeecCchhhhhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhccccCch
Q 040213 403 ILMILCVAVTAGFKNQHQIGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYFSAMIFKIHRGGW 482 (764)
Q Consensus 403 ~Lmi~~i~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~sanl~Ki~~GGW 482 (764)
+||++|+++|++||||++||||||+||++||++||+|+++||+.+||||++++++|+++|+++|++|||||+.||+||||
T Consensus 400 ~Lmv~~i~vv~~F~~s~~la~AYGiAV~~vM~iTT~L~~lV~~~~W~~~~~~~~~f~~~F~~ie~~f~sa~l~Ki~~GGW 479 (785)
T PLN00148 400 ILMILTLAVTIGFRDTTLIGNAYGLACMTVMFITTFLMALVIIFVWQKSIILAALFLLFFGFIEGVYLSAALMKVPQGGW 479 (785)
T ss_pred HHHHHHHHhheeeccchhHHHhhhhheeeHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCCChHHHHhcCCCCCCcccCceEEEEecCCCCcchhHHHHHhhcCccceE
Q 040213 483 VPLVIAAAFFISMSVWHYGTMKRHQFELQSKVPIEWILGLGPSLGLVRVPGVGLVYSELANGVPHIFAHFITNLPAIHSV 562 (764)
Q Consensus 483 ~pl~ia~~~~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~n~~lHe~ 562 (764)
+||++|++++++|++||||++++++++.++++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||++||+
T Consensus 480 ~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~~~~~~~~~l~~~~~~~RVpG~~vf~t~~~~gvP~~f~h~~~~~~~lHe~ 559 (785)
T PLN00148 480 VPLVLSAIFMSIMYIWHYGTRKKYNFDLHNKVSLKWLLGLGPSLGIVRVPGIGLIYSELATGVPAIFSHFVTNLPAFHKV 559 (785)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhcccCCCcccCcEEEEecCCCCCCCHHHHHHHHhCCcccce
Confidence 99999999999999999999999999999999999998877777788999999999999999999999999999999999
Q ss_pred EEEEEEEEeeeeccCCCeEEEEEEeCCCCCCEEEEEEEeeeccCCCCchHHHHHHHHHHHHHHhhhccccc-----ccc-
Q 040213 563 VIFVCVKYIPVYTVPEGERFLVTRVGPKSFHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLMDS-----CMA- 636 (764)
Q Consensus 563 vVfltV~~~~vP~V~~~eR~~v~~l~~~~~g~yRv~vrYGYmE~~~ip~~Fe~~lv~~L~~fI~~e~~~~~-----~~~- 636 (764)
+||||||++|+|+||++||+++++++++++++|||++||||||.++++++||++|+++|++||++|+.... .++
T Consensus 560 ~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~yr~~r~vvryGy~d~~~~~~dFe~~Lv~~L~~FIr~e~~~~~~~~~~~~~~ 639 (785)
T PLN00148 560 LVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIVRYGYKDIQRDDGDFENMLVQSIAEFIQMEAEEPQSSASESSSN 639 (785)
T ss_pred EEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEccCcccccchHHHHHHHHHHHHHHHhhhhcccccccccccc
Confidence 99999999999999999999999999988889999999999999989999999999999999999874321 011
Q ss_pred cCCcCCCCCCCCCCCCC--CCCC------CC--cc------cccCCCCccc-cCCCCccccccc-CcccCchhhHHHHHH
Q 040213 637 SEVYSPCDQGDSKDDAN--LPDP------HK--VT------TTFSPNSIVS-VVSPEYTVRTMS-SSQMISQDEIDELEF 698 (764)
Q Consensus 637 ~~~~~~~~~~~~~~~~~--l~~~------~~--~~------~~~~~~~~~s-~~~~~~~l~f~~-~s~~~~~~v~~El~~ 698 (764)
+++++..++..+..... ...+ .+ ++ ..++..+.++ ....+++++|.. .+.+.+++++||+++
T Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El~~ 719 (785)
T PLN00148 640 DGRMAVISTRDVQSSSLLMVSEQELADIDDSIQSSKSLTLQSLQSAYEDENPGQSRRRRVRFQLPENPGMDPSVREELMD 719 (785)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeecccccccccchHHHHHHH
Confidence 22233332221110000 0000 00 00 0000011111 112234556632 233346789999999
Q ss_pred HhhhhcCCcEEEEeecEEEecCCChhhHHHHHHHHHHHHhhhccccccccccCCCCeEEeeeEEEC
Q 040213 699 LTNSRDTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRENNAIFYCPRECLLNVGQVIIV 764 (764)
Q Consensus 699 L~~A~e~gvvY~LGr~~V~a~~~S~~~kk~~in~lF~FLrrN~R~~~~~l~IP~~rvVEVGm~yeI 764 (764)
|++|||+||+|++||++|+|+++|+|+||+++|++|.|||||||++...|+|||+|++||||+|||
T Consensus 720 L~~A~eaGVvYIlG~s~v~Ar~~Ss~~KKivIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGM~Y~V 785 (785)
T PLN00148 720 LIEAKEAGVAYIMGHSYVKARRSSSFLKKLAIDIGYSFLRKNCRGPAVALNIPHISLIEVGMIYYV 785 (785)
T ss_pred HHHHHHcCcEEEeccceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEcceEEEC
Confidence 999999999999999999999999999999999999999999999999999999999999999997
No 4
>PLN00149 potassium transporter; Provisional
Probab=100.00 E-value=7.7e-236 Score=2000.66 Aligned_cols=735 Identities=46% Similarity=0.821 Sum_probs=665.6
Q ss_pred cchhhhccccccccchhhHHHHHHHHhhhcceEecccccchhhhhhccCCCC---CCCccceehhhHHHHHHHHHhhhhe
Q 040213 28 VDEEAERHSDANVKNRLSALLLMRFAFKSLGVVYGDLGTSPMYVLYNTFPDG---IKDTEDVIDALSLIIYTLTIIPLIK 104 (764)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~La~~alGVVyGDIGTSPLY~~~~~f~~~---~~~~~~vlGvlSLIfWtL~liv~iK 104 (764)
||.|++..++ |+++.+|+.++.||+||||||||||||||||||+++|+++ .++++||+|+|||||||||||+++|
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~~l~La~~alGVVyGDIGTSPLYv~~~~f~~~~~~~~~~~~ilGvLSLIfWtL~Liv~iK 78 (779)
T PLN00149 1 MDLEGGSPQN--HVKKESWRTVLTLAYQSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIFGVLSFVFWTLTLIPLLK 78 (779)
T ss_pred CCcccCcccc--ccccccHHHHHHHHHhcccEEeCcccccHHHHHHHHhcCCCCCCCCHHHhhhHHHHHHHHHHHHHhhh
Confidence 5778877665 5667899998999999999999999999999999999752 4899999999999999999999999
Q ss_pred eeEEEEEecCCCCchHHHHHHHHhhccccccCCCCCCCchhhhhcccccc----cccchhhHhHHHhhhccchhHHHHHH
Q 040213 105 YVLIVCRANDNGQGGTFALYSLLCRHAKLRTIPNQDRSDEELTTYSRSTF----HERSHAAKTKRWLEKHSCSKIVLLVL 180 (764)
Q Consensus 105 Yv~ivl~adn~GEGG~~AL~sL~~r~~~~~~~~~~~~~d~~l~~~~~~~~----~~~~~~~~~~~~le~~~~~~~~l~~l 180 (764)
||+|||||||||||||||||||+||++|++++|||+++|+++++|+++.+ ++.+++.++|++|||++..|++++++
T Consensus 79 Yv~ivlrAdn~GEGGtfALysLl~r~~~~~l~pn~~~~d~~ls~~~~~~~~~~~~~~~~~~~~k~~le~~~~~~~~ll~l 158 (779)
T PLN00149 79 YVFIVLRADDNGEGGTFALYSLLCRHARVNSLPNCQLADEELSEYKKDSGSSSMPLSGFGSSLKSTLEKHRVLQRFLLVL 158 (779)
T ss_pred hEEEEEEecCCCCchHHHHHHHHHHhccccCCccccchhhhhhhhhccccccccccchhhhHHHHHHhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999987652 23345678999999999899999999
Q ss_pred HHHhhhhhccCccccCccc-----------------cch-hhhHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHH
Q 040213 181 VLVGSSMVIGDGILTPAIS-----------------EAV-VLVAVAILVVLFSVQHFGVDKVGWLFAPIVFVWFLLIGGI 242 (764)
Q Consensus 181 ~l~G~~l~~gDgviTPAiS-----------------~~V-v~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~l~~~ 242 (764)
|++|+||+||||+|||||| +++ +||||+||++||++||+||+|||++|||||++||++||++
T Consensus 159 ~l~G~~m~igDgvlTPAISVLSAVeGl~v~~~~~~~~~vvv~is~~ILv~LF~~Q~~GT~kvg~~FgPIml~Wf~~i~~i 238 (779)
T PLN00149 159 ALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEHHKYVEVPVACIILIGLFALQHYGTHRVGFLFAPVVLTWLLCISAI 238 (779)
T ss_pred HHHHHHHHHhccccchhHHHHHHhhcccccCCCccCCceehHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHH
Confidence 9999999999999999999 356 9999999999999999999999999999999999999999
Q ss_pred HHHhhcccCcceeEecCHHHHHHHHHhc--CchhhccceeeeeccchhhhccCCCCCccceeeehhhhhhHHHHHhhccc
Q 040213 243 GIINIWKYDSSVLKAFSPVHVYWFFRKG--HTWPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQ 320 (764)
Q Consensus 243 Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~--~g~~~LG~V~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~L~l~Y~GQ 320 (764)
|+|||++|||+||+|+||+|+++||.+| .||.+||+|+||+||+|||||||||||++|||+||+++|||||+|||+||
T Consensus 239 Giyni~~~~p~Vl~AlnP~y~~~f~~~~~~~g~~~LGgV~L~iTG~EALyADlGHF~~~~Ir~aw~~~V~P~L~L~Y~GQ 318 (779)
T PLN00149 239 GVYNIFHWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTSLVYPSLILAYMGQ 318 (779)
T ss_pred HHHHHHhcCHhHhhhcCHHHHHHHHHHCCCceeEeecchhhcccchhhhhhcccCCCccceeeeehhhHHHHHHHHhhhH
Confidence 9999999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCc---cccCcceecccCcchHHHHHHHHHHHHHHHhHHhhhhhhHHHHHHHcCCCCceeEEecCCCcCCcccc
Q 040213 321 AAYLMKKPD---HVHDVFYRSIPDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYI 397 (764)
Q Consensus 321 gA~Ll~~p~---~~~npF~~~~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~~Pr~~i~hTS~~~~GQIYI 397 (764)
||||++||+ +.+||||+++|+|++||++++||+||||||||+|||+||+++||++||||||+||+|||++++|||||
T Consensus 319 aA~l~~~p~~~~~~~~pFy~~iP~~~~~P~~vlAtlAaIIASQA~ISg~FSii~Qa~~Lg~fPrvkIvhTS~~~~GQIYI 398 (779)
T PLN00149 319 AAYLSKHHVIESDYRIGFYVSVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALGCFPKVKIVHTSSKIHGQIYI 398 (779)
T ss_pred HHHHhcCcchhccccCcHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCcccCCceee
Confidence 999999996 55669999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHhheeEEeecCchhhhhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhcc
Q 040213 398 PEINWILMILCVAVTAGFKNQHQIGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYFSAMIFKI 477 (764)
Q Consensus 398 P~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~sanl~Ki 477 (764)
|+|||+||++|+++|++||||++||||||+||++||++||+|+++||+.+|+|+++++++|+++|+++|++|||||+.||
T Consensus 399 P~vNw~Lmv~~i~vv~~F~~s~~l~~AYGiAV~~vM~iTT~L~~lv~~~~W~~~~~~~~~f~~~f~~ie~~f~sa~l~Ki 478 (779)
T PLN00149 399 PEINWTLMLLCLAVTVGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHKSVLLAICFIFFFGTIEALYFSASLIKF 478 (779)
T ss_pred HHHHHHHHHHHHhheeEecChHHHHHHhhhhhehHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCCChHHHHhcCCCCCCcccCceEEEEecCCCCcchhHHHHHhhcC
Q 040213 478 HRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQSKVPIEWILGLGPSLGLVRVPGVGLVYSELANGVPHIFAHFITNLP 557 (764)
Q Consensus 478 ~~GGW~pl~ia~~~~~iM~tW~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~n~ 557 (764)
+||||+||++|++++++|++||||++++++++.++++|++++.++.++.++.||||+|+|||++.+|+|++|.||++|||
T Consensus 479 ~~GGW~pl~ia~v~~~iM~~W~~G~~~~~~~~~~~~v~~~~~~~l~~~~~~~RvpG~~vf~t~~~~gvP~~f~h~~~~~~ 558 (779)
T PLN00149 479 LEGAWVPIALSFIFLLVMYVWHYGTLKRYEFDVQNKVSINWLLSLGPSLGIVRVRGIGLIHTELVSGIPAIFSHFVTNLP 558 (779)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHhccCCCCcccCcEEEEEcCCCCCCCHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999988877777889999999999999999999999999999
Q ss_pred ccceEEEEEEEEEeeeeccCCCeEEEEEEeCCCCCCEEEEEEEeeeccCCCCchHHHHHHHHHHHHHHhhhccccccc--
Q 040213 558 AIHSVVIFVCVKYIPVYTVPEGERFLVTRVGPKSFHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLMDSCM-- 635 (764)
Q Consensus 558 ~lHe~vVfltV~~~~vP~V~~~eR~~v~~l~~~~~g~yRv~vrYGYmE~~~ip~~Fe~~lv~~L~~fI~~e~~~~~~~-- 635 (764)
++||++||||||++|+|+||++||+++++++++++++|||++||||||..+++++||++|+++|++||++|+.+...+
T Consensus 559 ~lhe~~Vfv~ik~~~vP~V~~~eR~~v~~i~~~~~~~~r~vvryGy~d~~~d~~dFE~~Lve~L~~FI~~e~~~~~~~~~ 638 (779)
T PLN00149 559 AFHQVLVFLCIKSVPVPHVRPEERFLVGRIGPKEYRLYRCIVRYGYRDVHKDDMEFEKDLVCSIAEFIRSEKPEPNGAPE 638 (779)
T ss_pred cccceEEEEEEEECcccccChhheEEEEEecCCCceEEEEEEEEeeccccccchHHHHHHHHHHHHHHHhhhhccccccc
Confidence 999999999999999999999999999999998888999999999999998899999999999999999987432211
Q ss_pred ----ccCCcCCCCCCCCCCCCC-CCC-CC-Ccc--cccC--CCCccccCCCCcccccc-cCcccCchhhHHHHHHHhhhh
Q 040213 636 ----ASEVYSPCDQGDSKDDAN-LPD-PH-KVT--TTFS--PNSIVSVVSPEYTVRTM-SSSQMISQDEIDELEFLTNSR 703 (764)
Q Consensus 636 ----~~~~~~~~~~~~~~~~~~-l~~-~~-~~~--~~~~--~~~~~s~~~~~~~l~f~-~~s~~~~~~v~~El~~L~~A~ 703 (764)
++++++..++.+.+.+.. ... +. +.. +..+ ...+.+....+++++|+ +.+.+.+++++||+++|++||
T Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~eEl~~L~~A~ 718 (779)
T PLN00149 639 NEEGEDERMTVVGTCSTHLEGIQLREDDSDKQEPAGTSELREIRSPPVSRPKKRVRFVVPESPKIDRGAREELQELMEAR 718 (779)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccCccccCcccceeeccccccccchhHHHHHHHHHHHH
Confidence 122333333222111000 000 00 000 0000 00000001112455663 234445678999999999999
Q ss_pred cCCcEEEEeecEEEecCCChhhHHHHHHHHHHHHhhhccccccccccCCCCeEEeeeEEEC
Q 040213 704 DTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRENNAIFYCPRECLLNVGQVIIV 764 (764)
Q Consensus 704 e~gvvY~LGr~~V~a~~~S~~~kk~~in~lF~FLrrN~R~~~~~l~IP~~rvVEVGm~yeI 764 (764)
|+||+|++||++|++|++|+|+||+++|++|+|||||||++...|+|||+|++||||+|||
T Consensus 719 eaGVvYIlG~s~v~Ar~~Ss~~KK~vIn~~Y~FLRkNcR~~~~~L~IPh~~LleVGmvY~v 779 (779)
T PLN00149 719 EAGMAYILGHSYVRAKQGSSMMKKLVINYGYDFLRRNSRGPRYALSVPHASTLEVGMVYHV 779 (779)
T ss_pred HcCcEEEecCceEEEcCCCcHHHHHHHHHHHHHHHHhccCcccccCCChHHeEEeceEEEC
Confidence 9999999999999999999999999999999999999999999999999999999999997
No 5
>TIGR00794 kup potassium uptake protein. Proteins of the KUP family include the KUP (TrkD) protein of E. coli, a partially sequenced ORF from Lactococcus lactis, high affinity K+ uptake systems (Hak1) of the yeast Debaryomyces occidentalis as well as the fungus, Neurospora crassa, and several homologues in plants. While the E. coli KUP protein is assumed to be a secondary transporter, and uptake is blocked by protonophores such as CCCP (but not arsenate), the energy coupling mechanism has not been defined. However, the N. crassa protein has been shown to be a K+:H+ symporter, establishing that the KUP family consists of secondary carriers. The plant high affinity (20mM) K+ transporter can complement K+ uptake defects in E. coli.
Probab=100.00 E-value=4.4e-223 Score=1885.06 Aligned_cols=667 Identities=41% Similarity=0.748 Sum_probs=630.8
Q ss_pred HHhhhcceEecccccchhhhhhccCCCCCCCccceehhhHHHHHHHHHhhhheeeEEEEEecCCCCchHHHHHHHHhhcc
Q 040213 52 FAFKSLGVVYGDLGTSPMYVLYNTFPDGIKDTEDVIDALSLIIYTLTIIPLIKYVLIVCRANDNGQGGTFALYSLLCRHA 131 (764)
Q Consensus 52 La~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~vlGvlSLIfWtL~liv~iKYv~ivl~adn~GEGG~~AL~sL~~r~~ 131 (764)
|++||||||||||||||||||+++|.++.+++|||+|+|||||||||++|++|||++||||||||||||||||||+||++
T Consensus 1 La~~alGvVyGDIGTSPLY~~~~~f~~~~~~~~~ilGvlSLIfWtL~livtiKYv~ivlrAdn~GEGGi~AL~sL~~r~~ 80 (688)
T TIGR00794 1 LAFQSLGVIYGDIGTSPLYVLSSTFSGGFPTERDIFGVLSLIFWLLTFIVSFKYIFIVLRADNNGEGGTFALYSLIGRYA 80 (688)
T ss_pred CcceeeeeEeCcCcCCHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHhheeEEEEecCCCCchHHHHHHHHHHhc
Confidence 57999999999999999999999997556899999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCchhhhhcccccccccchhhHhHHHhhhccchhHHHHHHHHHhhhhhccCccccCccc------------
Q 040213 132 KLRTIPNQDRSDEELTTYSRSTFHERSHAAKTKRWLEKHSCSKIVLLVLVLVGSSMVIGDGILTPAIS------------ 199 (764)
Q Consensus 132 ~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~l~~gDgviTPAiS------------ 199 (764)
|.+.+|+|+++|+++++|+...+.+.+++.++|+++|++++.+++++++|++|+||+||||+||||||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~~~l~G~al~~gDgviTPAiSVLSAVeGl~v~~ 160 (688)
T TIGR00794 81 KISARPVHQELDRAESSYSTKSPNLLNKTTSLKTKLELSKFISKFLVIFGLLGGSMVMGDGVLTPAISVLSAVSGLEIVA 160 (688)
T ss_pred cccCCCcccchhhhhhhcccccccccchhhHHHHHhhhhHHHHHHHHHHHHHhHHHHhcccccccchhhhhhhccccccC
Confidence 99999999999999999988775556777899999999988888999999999999999999999999
Q ss_pred -----cchhhhHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHhhcccCcceeEecCHHHHHHHHHhc--Cc
Q 040213 200 -----EAVVLVAVAILVVLFSVQHFGVDKVGWLFAPIVFVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFRKG--HT 272 (764)
Q Consensus 200 -----~~Vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~--~g 272 (764)
++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++|||+||+|+||+||++||.+| .|
T Consensus 161 p~~~~~~Vv~it~~ILv~LF~iQ~~GT~kvg~~FgPim~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~~~~ 240 (688)
T TIGR00794 161 PSLSDTWVVPISCIILVLLFLIQRFGTAKVGFTFAPIILVWLLLLAGIGIYNIVKFNPEVLKALSPYYAVQFFIEYGTVG 240 (688)
T ss_pred CCCCCCeehhHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHHhcCHHHHhHhCHHHHHHHHHHCCCce
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999 99
Q ss_pred hhhccceeeeeccchhhhccCCCCCccceeeehhhhhhHHHHHhhccchhhhccCCccccCcceecccCcchHHHHHHHH
Q 040213 273 WPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDHVHDVFYRSIPDIIYWPVFVVAT 352 (764)
Q Consensus 273 ~~~LG~V~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~L~l~Y~GQgA~Ll~~p~~~~npF~~~~P~~~~~P~~vlAt 352 (764)
|.+||+|+||+|||||||||||||||+|||+||+++|||||+|||+||||||++||++.+||||.++|+|++|||++|||
T Consensus 241 ~~~LG~V~L~iTGaEALyADmGHFg~~~Ir~aw~~~V~P~L~LnY~GQgA~ll~~p~~~~NpFf~~~P~~~~~p~~vlAt 320 (688)
T TIGR00794 241 WVSLGGVVLSITGVEAMFADLGHFGKLPIQLAWFTFVYPSLILCYIGQAAYLSKHPEAIKNPFFLSIPDWALWPLFIIAT 320 (688)
T ss_pred eeeccchhheeccHhhhhcccCCCCcccceeehHHHHHHHHHHHHcchHHHHhcCcchhcCcHHHhCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHhhhhhhHHHHHHHcCCCCceeEEecCCCcCCcccchhhHHHHHHHhheeEEeecCchhhhhhhhchhhhH
Q 040213 353 AAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIPEINWILMILCVAVTAGFKNQHQIGNACGFAVVIV 432 (764)
Q Consensus 353 lAtIIASQA~Isg~FSi~~Qai~Lg~~Pr~~i~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV~~~ 432 (764)
+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||++||+|||+||++|
T Consensus 321 lAtIIASQA~IsG~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYiP~vNw~Lmv~~i~vvl~F~~S~~la~AYGiaVt~t 400 (688)
T TIGR00794 321 LAAIIASQAVISGVFSITSQAVRLGCFPRVKIIHTSEKYHGQIYIPFVNWLLMLGVIAVTAGFRDTNNLGAAYGIAVTGT 400 (688)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCceEEecCCccCCceeeHHHHHHHHHHHHheeEEecChHHHHHHhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhccccCchHHHHHHHHHHHHHHHHhhhHHHHHHHHHhc
Q 040213 433 MLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQS 512 (764)
Q Consensus 433 M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~sanl~Ki~~GGW~pl~ia~~~~~iM~tW~~G~~~~~~~~~~~ 512 (764)
|+|||+|+++||+.+|||+++++++++++|+.+|++||+||+.|++||||+||++|++++++|++|+|||+++++++.++
T Consensus 401 M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~i~~~iM~~W~~G~~~~~~~~~~~ 480 (688)
T TIGR00794 401 FLVTTCLMTVVMTIVWKWNIYFVALFLLVFLSVELIYFSSNLDKVPEGGWFPLSLSGIFMSVMTTWRYGRFRKLRRDHEH 480 (688)
T ss_pred hHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHhcCCCCC-CcccCceEEEEecCCCCcchhHHHHHhhcCccceEEEEEEEEEeeeeccCCCeEEEEEEeCCCC
Q 040213 513 KVPIEWILGLGPSLG-LVRVPGVGLVYSELANGVPHIFAHFITNLPAIHSVVIFVCVKYIPVYTVPEGERFLVTRVGPKS 591 (764)
Q Consensus 513 ~~~~~~~~~~~~~~~-~~rvpG~avf~t~~~~~vP~~~~h~l~~n~~lHe~vVfltV~~~~vP~V~~~eR~~v~~l~~~~ 591 (764)
++|+++|++.+.+.. ..|+||+|+|+|++.+++|+++.||++|||++||++||+||+++|+|+||++||++++++++++
T Consensus 481 ~~~~~~~~~~l~~~~~l~rvpG~avf~t~~~~~vP~~~~h~l~~~~~lhe~~vfltv~~~~~P~Vp~~eR~~v~~l~~~~ 560 (688)
T TIGR00794 481 RVSISALIASLQPKPGLVRVPGIGIYYSNLVNGIPAVFGHLVTKFPSIHEVFIFLSLRTLDAPTVHNEERVQISQVGPTE 560 (688)
T ss_pred CCCHHHHHHHHhhcCCCcccCCeEEEeeCCccCCCHHHHHHHHhCCccceEEEEEEEEECCCCcCCcceEEEEEEEcCCC
Confidence 999999998665444 3799999999999999999999999999999999999999999999999999999999999643
Q ss_pred CCEEEEEEEeeeccCCCCchHHHHHHHHHHHHHHhhhcccccccccCCcCCCCCCCCCCCCCCCCCCCcccccCCCCccc
Q 040213 592 FHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLMDSCMASEVYSPCDQGDSKDDANLPDPHKVTTTFSPNSIVS 671 (764)
Q Consensus 592 ~g~yRv~vrYGYmE~~~ip~~Fe~~lv~~L~~fI~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~s 671 (764)
|+|||++||||||+||+|++||++++++|++|++++.... ..+
T Consensus 561 -g~~rv~~~yGf~e~~~~~~~l~~~ii~~L~~fi~~~~~~~-~~~----------------------------------- 603 (688)
T TIGR00794 561 -GMYRCVIRYGFMDTPNEPKELAAHIVNSIVEFVEHECGFN-LNN----------------------------------- 603 (688)
T ss_pred -CEEEEEEEecCCcCCCcHHHHHHHHHHHHHHHHHHHhhhc-ccc-----------------------------------
Confidence 8999999999999999999999999999999999753210 000
Q ss_pred cCCCCcccccccCcccCchhhHHHHHHHhhhhcCCcEEEEeecEEEecCCChhhHHHHH-HHHHHHHhhhcccccccccc
Q 040213 672 VVSPEYTVRTMSSSQMISQDEIDELEFLTNSRDTGVVHILGKTVMMARRDSEFYKKILI-DYIFTFLRKICRENNAIFYC 750 (764)
Q Consensus 672 ~~~~~~~l~f~~~s~~~~~~v~~El~~L~~A~e~gvvY~LGr~~V~a~~~S~~~kk~~i-n~lF~FLrrN~R~~~~~l~I 750 (764)
+++++ +...+.+.+||++++++++|+|++||+||+++++++++++.|| |+ |++|+||+||||+++++|+|
T Consensus 604 ----~~~~~----~~~~~~~~eee~~~~~~~~~~gv~yflg~~~~~~~~~~~~~~~-~~I~~lf~~l~rn~~~~~~~~~i 674 (688)
T TIGR00794 604 ----LEELS----DKRCRMPIEEIFENAMETKEHGYSYFMGEESLILKKRSPILRK-IRVNHVFLFIRRNARRAPKVLEI 674 (688)
T ss_pred ----ccccc----ccccccchHHHHHHHHHHhhcCCEEEeeceEEEECCCccHHHH-HHHHHHHHHHHHhccChhhheeC
Confidence 00000 0000113688999999999999999999999999999998888 66 99999999999999999999
Q ss_pred CCCCeEEeeeEEEC
Q 040213 751 PRECLLNVGQVIIV 764 (764)
Q Consensus 751 P~~rvVEVGm~yeI 764 (764)
|+||++||||+|||
T Consensus 675 P~~rvvevG~~~~i 688 (688)
T TIGR00794 675 PPDRLLEVGTVVEI 688 (688)
T ss_pred ChhhEEEEeeEEEC
Confidence 99999999999997
No 6
>PRK10745 trkD potassium transport protein Kup; Provisional
Probab=100.00 E-value=4.4e-211 Score=1763.24 Aligned_cols=599 Identities=30% Similarity=0.551 Sum_probs=571.8
Q ss_pred ccchhhHHHHHHHHhhhcceEecccccchhhhhhccCCC--C-CCCccceehhhHHHHHHHHHhhhheeeEEEEEecCCC
Q 040213 40 VKNRLSALLLMRFAFKSLGVVYGDLGTSPMYVLYNTFPD--G-IKDTEDVIDALSLIIYTLTIIPLIKYVLIVCRANDNG 116 (764)
Q Consensus 40 ~~~~~~~~~~~~La~~alGVVyGDIGTSPLY~~~~~f~~--~-~~~~~~vlGvlSLIfWtL~liv~iKYv~ivl~adn~G 116 (764)
+++|.++. .++++|||||||||||||||+++++|.+ + .+++|||+|++||||||||++|++|||+++|||||||
T Consensus 3 ~~~~~~~~---~l~l~aLGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~~vlGvlSLIfWtL~livtiKYv~ivlrADn~G 79 (622)
T PRK10745 3 TDNKQSLP---AITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGVERDAVFGFLSLIFWLLILVVSIKYLTFVMRADNAG 79 (622)
T ss_pred CccccchH---HHHHhhcceEecCCCCChHHHHHHHhccCCCCCCChhHeehhhHHHHHHHHHHHHHHhheEEEecCCCC
Confidence 45555553 3778999999999999999999999975 2 4899999999999999999999999999999999999
Q ss_pred CchHHHHHHHHhhccccccCCCCCCCchhhhhcccccccccchhhHhHHHhhhccchhHHHHHHHHHhhhhhccCccccC
Q 040213 117 QGGTFALYSLLCRHAKLRTIPNQDRSDEELTTYSRSTFHERSHAAKTKRWLEKHSCSKIVLLVLVLVGSSMVIGDGILTP 196 (764)
Q Consensus 117 EGG~~AL~sL~~r~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~l~~gDgviTP 196 (764)
||||||||||++|+.+ ++.+.+++++|++|+||+||||+|||
T Consensus 80 EGGi~AL~aL~~~~~~--------------------------------------~~~~~~l~~lgl~Gaal~~gDgvITP 121 (622)
T PRK10745 80 EGGILTLMSLAGRNTS--------------------------------------ARTTSMLVIMGLIGGSFFYGEVVITP 121 (622)
T ss_pred CchHHHHHHHHhhhcc--------------------------------------cchhHHHHHHHHHHHHHHhhccccch
Confidence 9999999999987541 24455788999999999999999999
Q ss_pred ccc----------------cchhhhHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHhhcccCcceeEecCH
Q 040213 197 AIS----------------EAVVLVAVAILVVLFSVQHFGVDKVGWLFAPIVFVWFLLIGGIGIINIWKYDSSVLKAFSP 260 (764)
Q Consensus 197 AiS----------------~~Vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP 260 (764)
||| ++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++ ||+||+|+||
T Consensus 122 AISVLSAVEGL~v~~p~l~~~Vvpit~~ILv~LF~iQ~~GT~~vG~~FgPIm~vWF~~i~~~Gi~~I~~-~P~Vl~AlnP 200 (622)
T PRK10745 122 AISVMSAIEGLEIVAPQLDTYIVPLSIIVLTLLFMIQKHGTGMVGKLFAPIMLTWFLTLAVLGLRSIIA-NPEVLHALNP 200 (622)
T ss_pred hHHHHHHhhcccccCCCCCCccHHHHHHHHHHHHHHhccccHHHhhhhhhHHHHHHHHHHHHHHHHHhc-CHHHHhHhCH
Confidence 999 78999999999999999999999999999999999999999999999998 8999999999
Q ss_pred HHHHHHHHhc--CchhhccceeeeeccchhhhccCCCCCccceeeehhhhhhHHHHHhhccchhhhccCCccccCcceec
Q 040213 261 VHVYWFFRKG--HTWPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDHVHDVFYRS 338 (764)
Q Consensus 261 ~ya~~f~~~~--~g~~~LG~V~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~L~l~Y~GQgA~Ll~~p~~~~npF~~~ 338 (764)
+||++||.+| .||.+||+|+||+|||||||||||||||+|||+||+++|||||+|||+||||+|++||++.+||||++
T Consensus 201 ~ya~~f~~~~~~~gf~~LG~V~L~vTGaEALYADmGHFG~~~Ir~aW~~~v~P~L~LnY~GQgA~ll~~p~~~~NpFf~~ 280 (622)
T PRK10745 201 MWAVHFFLEYKTVSFFALGAVVLAITGVEALYADMGHFGKFPIRLAWFTVVLPSLVLNYFGQGALLLKNPEAIKNPFFLL 280 (622)
T ss_pred HHHHHHHHhCCCceEEEecceeeeccchHHHhhccCCCCccceeeeehhhHHHHHHHHhcchHHHHhcCchhhcCcHHHh
Confidence 9999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcchHHHHHHHHHHHHHHHhHHhhhhhhHHHHHHHcCCCCceeEEecCCCcCCcccchhhHHHHHHHhheeEEeecCc
Q 040213 339 IPDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIPEINWILMILCVAVTAGFKNQ 418 (764)
Q Consensus 339 ~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~~Pr~~i~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s 418 (764)
+|+|++|||+++||+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|+++|++||||
T Consensus 281 ~P~~~~~p~viLATlAtIIASQAvISGaFSl~~QAi~Lg~~Prl~I~hTS~~~~GQIYIP~vNw~Lmv~~i~~vl~F~sS 360 (622)
T PRK10745 281 APDWALIPLLILATLATVIASQAVISGVFSLTRQAVRLGYLPPMRIIHTSEMESGQIYIPFVNWLLYVAVVIVIVSFEHS 360 (622)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHhCCCCCceEEeCCCccCCceeeHHHHHHHHHHHHeeEEEecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhccccCchHHHHHHHHHHHHHHHH
Q 040213 419 HQIGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAAFFISMSVW 498 (764)
Q Consensus 419 ~~l~~AYGiAV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~sanl~Ki~~GGW~pl~ia~~~~~iM~tW 498 (764)
+|||+|||+||++||++||+|++++++.+|+|+++++++++++|+++|++||+||+.|++||||+|+++|++++++|+||
T Consensus 361 ~~La~AYGiAVt~tM~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~ff~anl~Ki~~GGW~pl~ia~v~~~iM~tW 440 (622)
T PRK10745 361 SNLAAAYGIAVTGTMVLTSILSTTVARKNWHWNKYFVALILIAFLCIDIPLFSANLDKLLSGGWLPLSLGLVMFIVMTTW 440 (622)
T ss_pred hHHHHHhhhhheeHhHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHhcCCChHHHHhcCCCCCCcccCceEEEEecCCCCcchhHHHHHhhcCccceEEEEEEEEEeeeeccCC
Q 040213 499 HYGTMKRHQFELQSKVPIEWILGLGPSLGLVRVPGVGLVYSELANGVPHIFAHFITNLPAIHSVVIFVCVKYIPVYTVPE 578 (764)
Q Consensus 499 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~n~~lHe~vVfltV~~~~vP~V~~ 578 (764)
++||++++++++++++|+++|++.+++.++.|+||+|+|+|+..+++|+++.||+||||++||++|||||+++|+|+||+
T Consensus 441 ~~G~~~~~~~~~~~~~~l~~f~~~l~~~~~~rvpG~avflt~~~~~vP~~l~h~lk~~~~lhe~~v~l~v~~~~~P~V~~ 520 (622)
T PRK10745 441 KSERFRLLRRMHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALLHNLKHNKVLHERVILLTLRTEDAPYVHN 520 (622)
T ss_pred HHhHHHHHHHHHhcCCCHHHHHHHhhhcCCCccCeEEEEEeCCCCCCCHHHHHHhhcCCccceEEEEEEEEECCCcccCc
Confidence 99999999999999999999999998777789999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEEeCCCCCCEEEEEEEeeeccCCCCchHHHHHHHHHHHHHHhhhcccccccccCCcCCCCCCCCCCCCCCCCCC
Q 040213 579 GERFLVTRVGPKSFHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLMDSCMASEVYSPCDQGDSKDDANLPDPH 658 (764)
Q Consensus 579 ~eR~~v~~l~~~~~g~yRv~vrYGYmE~~~ip~~Fe~~lv~~L~~fI~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 658 (764)
+||++++++++ |+|||++||||||+||+|+.+++ |+
T Consensus 521 ~eR~~v~~l~~---g~~rv~~~yGf~e~~~i~~~L~~------------------~~----------------------- 556 (622)
T PRK10745 521 VRRVQIEQLSP---TFWRVVASYGWRETPNVEEVFHR------------------CG----------------------- 556 (622)
T ss_pred ccEEEEEEECC---CEEEEEEEecCCCCCCHHHHHHH------------------HH-----------------------
Confidence 99999999997 89999999999999999999984 11
Q ss_pred CcccccCCCCccccCCCCcccccccCcccCchhhHHHHHHHhhhhcCCcEEEEeecEEEecCCChhhHHHHHHHHHHHHh
Q 040213 659 KVTTTFSPNSIVSVVSPEYTVRTMSSSQMISQDEIDELEFLTNSRDTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLR 738 (764)
Q Consensus 659 ~~~~~~~~~~~~s~~~~~~~l~f~~~s~~~~~~v~~El~~L~~A~e~gvvY~LGr~~V~a~~~S~~~kk~~in~lF~FLr 738 (764)
++++++++ ++++||+|||+++++++++|.+ |++++|+||.
T Consensus 557 -----------------~~g~~~~~---------------------~~~s~fl~r~~l~~~~~~~m~~--wr~~lF~~m~ 596 (622)
T PRK10745 557 -----------------LEGLSCRM---------------------METSFFMSHESLILGKRPWYLR--LRGKLFLLLQ 596 (622)
T ss_pred -----------------hCCCCCCc---------------------cceEEEEeeEEEEeCCCCCcHH--HHHHHHHHHH
Confidence 11334434 7999999999999999889888 9999999999
Q ss_pred hhccccccccccCCCCeEEeeeEEEC
Q 040213 739 KICRENNAIFYCPRECLLNVGQVIIV 764 (764)
Q Consensus 739 rN~R~~~~~l~IP~~rvVEVGm~yeI 764 (764)
|||++++++|++|+|||+|+|+++||
T Consensus 597 rna~~~~~~f~lP~~rvvelG~~v~i 622 (622)
T PRK10745 597 RNALRAPDQFEIPPNRVIELGTQVEI 622 (622)
T ss_pred HcCCCHHHHhCCCcccEEEEeeEEeC
Confidence 99999999999999999999999996
No 7
>COG3158 Kup K+ transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-202 Score=1651.00 Aligned_cols=593 Identities=33% Similarity=0.606 Sum_probs=575.4
Q ss_pred HHHHHHhhhcceEecccccchhhhhhccCCC--C-CCCccceehhhHHHHHHHHHhhhheeeEEEEEecCCCCchHHHHH
Q 040213 48 LLMRFAFKSLGVVYGDLGTSPMYVLYNTFPD--G-IKDTEDVIDALSLIIYTLTIIPLIKYVLIVCRANDNGQGGTFALY 124 (764)
Q Consensus 48 ~~~~La~~alGVVyGDIGTSPLY~~~~~f~~--~-~~~~~~vlGvlSLIfWtL~liv~iKYv~ivl~adn~GEGG~~AL~ 124 (764)
++..++++|+|||||||||||||+++|+|.. + ..++++|+|++||||||||+|||+|||+++|||||||||||++|+
T Consensus 14 ~~~~l~lgAiGVVyGDIGTSPLYa~~e~~~~~~~~~v~~~~VlGvlSLi~WtLtlIVTiKYv~~vlRADN~GEGGilsL~ 93 (627)
T COG3158 14 STKALTLGAIGVVYGDIGTSPLYALREALSGQGGLGVSRDEVLGVLSLIIWTLTLIVTIKYVLFVLRADNNGEGGILSLM 93 (627)
T ss_pred cchhHhhheeeeEeccCCCChHHHHHHHhccCCCCCCCcceeeeHHHHHHHHHHHHHHHhhheeEEecCCCCCchhhhHH
Confidence 3566889999999999999999999999986 3 588999999999999999999999999999999999999999999
Q ss_pred HHHhhccccccCCCCCCCchhhhhcccccccccchhhHhHHHhhhccchhHHHHHHHHHhhhhhccCccccCccc-----
Q 040213 125 SLLCRHAKLRTIPNQDRSDEELTTYSRSTFHERSHAAKTKRWLEKHSCSKIVLLVLVLVGSSMVIGDGILTPAIS----- 199 (764)
Q Consensus 125 sL~~r~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~l~~gDgviTPAiS----- 199 (764)
+|++|..+ +...++.++|++|+|+|||||+||||||
T Consensus 94 aL~~~~~~---------------------------------------~~~~~l~~~g~iGaalf~GD~vITPAiSVlSAv 134 (627)
T COG3158 94 ALARRAAP---------------------------------------RRTALLIILGLIGAALFYGDAVITPAISVLSAV 134 (627)
T ss_pred HHHHhhcC---------------------------------------CCchhhhhHHHHhHHHHhcccccchhHHHHHHh
Confidence 99988652 4566899999999999999999999999
Q ss_pred -----------cchhhhHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHhhcccCcceeEecCHHHHHHHHH
Q 040213 200 -----------EAVVLVAVAILVVLFSVQHFGVDKVGWLFAPIVFVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFR 268 (764)
Q Consensus 200 -----------~~Vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~ 268 (764)
++|+|||++||++||++||+||++||++|||||++||+++|.+|++||.+ ||+||+|+||+||++|+.
T Consensus 135 EGL~iv~p~~~~~Vvpitl~IL~~LF~iQ~~GT~~Vg~~FGPVm~lWF~~l~~~Gl~~i~~-~p~IL~AiNP~yAi~fl~ 213 (627)
T COG3158 135 EGLEIVTPALDPYVVPITLIILVLLFLIQRFGTGRVGKLFGPVMLLWFLALAVLGLINIID-DPEILRAINPYYAVHFLL 213 (627)
T ss_pred ccccccCccccCccHHHHHHHHHHHHHHhcccchhhhhhhccHHHHHHHHHHHHHHHHHhc-CHHHHHHhChHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999998 999999999999999999
Q ss_pred hc--CchhhccceeeeeccchhhhccCCCCCccceeeehhhhhhHHHHHhhccchhhhccCCccccCcceecccCcchHH
Q 040213 269 KG--HTWPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDHVHDVFYRSIPDIIYWP 346 (764)
Q Consensus 269 ~~--~g~~~LG~V~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~L~l~Y~GQgA~Ll~~p~~~~npF~~~~P~~~~~P 346 (764)
++ .||++||+||||+||+||||||||||||+|||.||+++|+|||+|||+||||++|+||++..||||.++|+|++||
T Consensus 214 ~~~~~gf~vLGaVfLavTGaEALYADmGHfGr~pI~~AWf~vv~P~L~LNY~GQGA~vL~~p~a~~npFF~~~P~~aliP 293 (627)
T COG3158 214 EEGFVGFFVLGAVFLAVTGAEALYADMGHFGRKPIRVAWFFVVLPCLLLNYFGQGALLLSNPEAIGNPFFLLAPDWALIP 293 (627)
T ss_pred hCCceEEEEeeeeeeeeccHHHHHhhccccCCccHHHHHHHHHHHHHHHHHccccceeccCcccccCcHHHhChhhHHHH
Confidence 99 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHhhhhhhHHHHHHHcCCCCceeEEecCCCcCCcccchhhHHHHHHHhheeEEeecCchhhhhhhh
Q 040213 347 VFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIPEINWILMILCVAVTAGFKNQHQIGNACG 426 (764)
Q Consensus 347 ~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~~Pr~~i~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYG 426 (764)
|++|||+||||||||+|||+||++||||+||++|||||.|||+++.||||||.|||+|++++++++++||+|++||+|||
T Consensus 294 ~viLAT~ATVIASQAvISGaFSLtrQAi~Lg~lPrm~I~~TSe~~~GQIYiP~VN~~L~~~V~~~vl~F~~S~~LAaAYG 373 (627)
T COG3158 294 LVILATAATVIASQAVISGAFSLTRQAIRLGYLPRMRIRHTSETESGQIYIPAVNWLLLVAVVFVVLGFGSSSNLAAAYG 373 (627)
T ss_pred HHHHHHHHHHHHHHHHHhhHhHHHHHHHHhCCCCceEEEecCCcccceEEehHHHHHHHHHHhheeeEecChHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhccccCchHHHHHHHHHHHHHHHHhhhHHHHH
Q 040213 427 FAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRH 506 (764)
Q Consensus 427 iAV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~sanl~Ki~~GGW~pl~ia~~~~~iM~tW~~G~~~~~ 506 (764)
+|||+||+|||+|++++++..|||+++.+.++.++|+++|..||+||+.|++||||+|+++|++++++|+||++|+++++
T Consensus 374 iAVTgtM~iTt~L~~~~~~~~w~w~~~~~~~~~~~f~~id~~Ff~AN~~Ki~~GGw~pllia~~i~~vM~tW~~g~~~l~ 453 (627)
T COG3158 374 IAVTGTMVITTILLTVVMRKKWKWRKWLVALILIVFLAIDILFFAANLLKIHDGGWLPLLLAAVIFFVMWTWKRGRQILF 453 (627)
T ss_pred hheeehhHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCChHHHHhcCCCCCCcccCceEEEEecCCCCcchhHHHHHhhcCccceEEEEEEEEEeeeeccCCCeEEEEEE
Q 040213 507 QFELQSKVPIEWILGLGPSLGLVRVPGVGLVYSELANGVPHIFAHFITNLPAIHSVVIFVCVKYIPVYTVPEGERFLVTR 586 (764)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~n~~lHe~vVfltV~~~~vP~V~~~eR~~v~~ 586 (764)
++.+++++|++.|++++++.++.||||||||+|++.+.+|.+++||+|||+++||++||+||++.++|+|+++||+++|+
T Consensus 454 ~~~~~~~i~l~~fi~~l~~~~p~~v~gTAVfLt~~~~~vP~aLlhnlkhnkvlhe~nv~ltv~t~~~P~v~~~~r~~ve~ 533 (627)
T COG3158 454 EKTRENGIPLDAFIASLEKHPPVRVPGTAVFLTRDPDVVPRALLHNLKHNKVLHERNVFLTVRTEDVPYVHPTDRVKVEQ 533 (627)
T ss_pred HHhhcCCCCHHHHHHHHhhCCCcccCceEEEEcCCCCcCcHHHHHHhhhhheeeeeEEEEEEEecCCCCCCccceeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCEEEEEEEeeeccCCCCchHHHHHHHHHHHHHHhhhcccccccccCCcCCCCCCCCCCCCCCCCCCCcccccCC
Q 040213 587 VGPKSFHMFHCAARYGYKDLHKRDDEFEKNLFENLFRFMRLESLMDSCMASEVYSPCDQGDSKDDANLPDPHKVTTTFSP 666 (764)
Q Consensus 587 l~~~~~g~yRv~vrYGYmE~~~ip~~Fe~~lv~~L~~fI~~e~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 666 (764)
+++ +|+||+++|||||+||+|+.+.. |.
T Consensus 534 l~~---~f~rV~l~~Gfme~pnvp~~l~~------------------~~------------------------------- 561 (627)
T COG3158 534 LSD---DFVRVVLHFGFMETPNVPRALRL------------------CR------------------------------- 561 (627)
T ss_pred ccC---ceEEEEEEeeccCCCCHHHHHHH------------------Hh-------------------------------
Confidence 998 79999999999999999999984 32
Q ss_pred CCccccCCCCcccccccCcccCchhhHHHHHHHhhhhcCCcEEEEeecEEEecCCChhhHHHHHHHHHHHHhhhcccccc
Q 040213 667 NSIVSVVSPEYTVRTMSSSQMISQDEIDELEFLTNSRDTGVVHILGKTVMMARRDSEFYKKILIDYIFTFLRKICRENNA 746 (764)
Q Consensus 667 ~~~~s~~~~~~~l~f~~~s~~~~~~v~~El~~L~~A~e~gvvY~LGr~~V~a~~~S~~~kk~~in~lF~FLrrN~R~~~~ 746 (764)
++|+.|++ ++++||+|||+++++++++|.+ |++++|..|.||+.++++
T Consensus 562 ---------~~G~~f~i---------------------m~tsFfl~re~l~~~~~~g~~~--w~~~lfi~l~r~aa~~~~ 609 (627)
T COG3158 562 ---------KKGLKFDI---------------------METSFFLSRESLIASKNSGMPR--WRDRLFIALARNAASPTD 609 (627)
T ss_pred ---------hcCceecc---------------------cceEEEEEeeeeecCCCCCchH--HHHHHHHHHHHhcCCHHH
Confidence 23556655 8999999999999999999999 999999999999999999
Q ss_pred ccccCCCCeEEeeeEEEC
Q 040213 747 IFYCPRECLLNVGQVIIV 764 (764)
Q Consensus 747 ~l~IP~~rvVEVGm~yeI 764 (764)
+|+||+|||||+|.++||
T Consensus 610 ~F~lp~~rvvElGtqveI 627 (627)
T COG3158 610 YFKLPPNRVVELGTQVEI 627 (627)
T ss_pred hhCCCCCcEEEeeeeeeC
Confidence 999999999999999997
No 8
>PF02705 K_trans: K+ potassium transporter; InterPro: IPR003855 This is a family of K+ potassium transporters that are conserved across phyla, having both bacterial (KUP) [], yeast (HAK) [], and plant (AtKT) [] sequences as members.; GO: 0015079 potassium ion transmembrane transporter activity, 0071805 potassium ion transmembrane transport, 0016020 membrane
Probab=100.00 E-value=4.8e-192 Score=1597.63 Aligned_cols=514 Identities=44% Similarity=0.783 Sum_probs=501.3
Q ss_pred HhhhcceEecccccchhhhhhccCCC--CCCCccceehhhHHHHHHHHHhhhheeeEEEEEecCCCCchHHHHHHHHhhc
Q 040213 53 AFKSLGVVYGDLGTSPMYVLYNTFPD--GIKDTEDVIDALSLIIYTLTIIPLIKYVLIVCRANDNGQGGTFALYSLLCRH 130 (764)
Q Consensus 53 a~~alGVVyGDIGTSPLY~~~~~f~~--~~~~~~~vlGvlSLIfWtL~liv~iKYv~ivl~adn~GEGG~~AL~sL~~r~ 130 (764)
|++|||||||||||||||+++++|.+ ..+++|||+|+|||||||||++|++||++++|||||||||||||||||+||.
T Consensus 1 a~~alGVVyGDIGTSPLY~~~~~f~~~~~~~~~~~vlG~lSlIfWtL~liv~iKYv~ivlradn~GEGGi~aL~sL~~~~ 80 (534)
T PF02705_consen 1 ALGALGVVYGDIGTSPLYVFKEIFGSHGLPPTEENVLGVLSLIFWTLTLIVTIKYVLIVLRADNNGEGGIFALYSLIRRF 80 (534)
T ss_pred CceeEEEEeCCCCCCHHHHHHHHHhhcccCCcHHHHHHHHHHHHHHHHHHHHHheEEEEEEeCCCCChhHHHHHHHHHHh
Confidence 58999999999999999999999932 3799999999999999999999999999999999999999999999999864
Q ss_pred cccccCCCCCCCchhhhhcccccccccchhhHhHHHhhhccchhHHHHHHHHHhhhhhccCccccCccc-----------
Q 040213 131 AKLRTIPNQDRSDEELTTYSRSTFHERSHAAKTKRWLEKHSCSKIVLLVLVLVGSSMVIGDGILTPAIS----------- 199 (764)
Q Consensus 131 ~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~le~~~~~~~~l~~l~l~G~~l~~gDgviTPAiS----------- 199 (764)
.+ ++++.++.++++|++|+||+||||+||||||
T Consensus 81 ~~------------------------------------~~~~~~~~l~~l~l~G~al~~gDgviTPAISVlSAvEGl~v~ 124 (534)
T PF02705_consen 81 LK------------------------------------SSKRRRWLLLILGLLGAALFYGDGVITPAISVLSAVEGLEVA 124 (534)
T ss_pred hc------------------------------------cchhHHHHHHHHHHHHhhhhhcceeecchHHHHHHhhhhhcc
Confidence 32 2556677789999999999999999999999
Q ss_pred -----cchhhhHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHhhcccCcceeEecCHHHHHHHHHhc--Cc
Q 040213 200 -----EAVVLVAVAILVVLFSVQHFGVDKVGWLFAPIVFVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFRKG--HT 272 (764)
Q Consensus 200 -----~~Vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~--~g 272 (764)
++|+||||+||++||++||+||+|||++|||||++||++||++|+|||++ +|+||+|+||+||++||.+| .|
T Consensus 125 ~p~~~~~Vv~it~~ILv~LF~iQ~~GT~~ig~~FgPim~~WF~~l~~~G~~~I~~-~p~Vl~A~nP~yai~f~~~~~~~~ 203 (534)
T PF02705_consen 125 TPSLEPYVVPITIAILVGLFAIQRFGTAKIGKLFGPIMLLWFLTLGVLGLYNIIQ-HPEVLKALNPYYAIRFFIRNGWIG 203 (534)
T ss_pred CCCCcceehhHHHHHHHHHHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHHHHhh-CHHHHHHhCHHHHHHHHHHcCCch
Confidence 89999999999999999999999999999999999999999999999999 59999999999999999999 79
Q ss_pred hhhccceeeeeccchhhhccCCCCCccceeeehhhhhhHHHHHhhccchhhhccCCccccCcceecccCcchHHHHHHHH
Q 040213 273 WPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDHVHDVFYRSIPDIIYWPVFVVAT 352 (764)
Q Consensus 273 ~~~LG~V~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~L~l~Y~GQgA~Ll~~p~~~~npF~~~~P~~~~~P~~vlAt 352 (764)
|.+||+|+||+|||||||||||||||+|||+||+++|||||+|||+||||+|++||++.+||||+++|+|++||++++||
T Consensus 204 ~~~LG~V~L~~TGaEALyADmGHfg~~~Ir~aw~~~V~PaL~LnY~GQgA~ll~~p~~~~npFf~~~P~~~~~p~~ilAt 283 (534)
T PF02705_consen 204 FFVLGAVFLCVTGAEALYADMGHFGRKPIRIAWFFLVFPALLLNYFGQGALLLSHPEAVSNPFFLLIPEWLLWPMVILAT 283 (534)
T ss_pred hhhcchHHHHHhhHHHHHhhhccccchhhhhhHHHHHHHHHHHHHccHHHHHHcCcchhhhHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHhhhhhhHHHHHHHcCCCCceeEEecCCCcCCcccchhhHHHHHHHhheeEEeecCchhhhhhhhchhhhH
Q 040213 353 AAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIPEINWILMILCVAVTAGFKNQHQIGNACGFAVVIV 432 (764)
Q Consensus 353 lAtIIASQA~Isg~FSi~~Qai~Lg~~Pr~~i~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV~~~ 432 (764)
+||||||||+|||+||+++||++||||||+||+|||++++||||||+|||+||++|++++++||||+|||+|||+||++|
T Consensus 284 lAtIIASQA~Isg~FSl~~Qai~Lg~~Pr~~I~hTS~~~~GQIYIP~vNw~L~i~~i~vvl~F~~S~~la~AYGiAVt~t 363 (534)
T PF02705_consen 284 LATIIASQAVISGAFSLTRQAIQLGYFPRLKIVHTSEKEEGQIYIPEVNWLLMIGVIAVVLGFRSSSNLAAAYGIAVTGT 363 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEECCcccCCcEechHHHHHHHHHHHhhheEECChHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhccccCchHHHHHHHHHHHHHHHHhhhHHHHHHHHHhc
Q 040213 433 MLVTTLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAAFFISMSVWHYGTMKRHQFELQS 512 (764)
Q Consensus 433 M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~sanl~Ki~~GGW~pl~ia~~~~~iM~tW~~G~~~~~~~~~~~ 512 (764)
|++||+|++++++.+|||+++++++++++|+++|++||+||+.|++||||+|+++|++++++|+||++||++++++++++
T Consensus 364 M~iTT~L~~~v~~~~w~~~~~~~~~~~~~fl~id~~ff~anl~K~~~GGW~pl~ia~~l~~iM~tW~~G~~~~~~~~~~~ 443 (534)
T PF02705_consen 364 MLITTILLFLVMRRVWKWPLWLALLFFLFFLVIDLLFFSANLLKFPHGGWFPLLIAAVLFTIMYTWRRGRKLLYEFEREN 443 (534)
T ss_pred HHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHhcCCCCCCcccCceEEEEecCCCCcchhHHHHHhhcCccceEEEEEEEEEeeeeccCCCeEEEEEEeCCCCC
Q 040213 513 KVPIEWILGLGPSLGLVRVPGVGLVYSELANGVPHIFAHFITNLPAIHSVVIFVCVKYIPVYTVPEGERFLVTRVGPKSF 592 (764)
Q Consensus 513 ~~~~~~~~~~~~~~~~~rvpG~avf~t~~~~~vP~~~~h~l~~n~~lHe~vVfltV~~~~vP~V~~~eR~~v~~l~~~~~ 592 (764)
++++++|+++.++.++.|+||+|+|+|+..+++|+++.||++||+++||+++|++++++|+|+||++||++++++++ +
T Consensus 444 ~~~~~~~~~~~~~~~~~rvpG~aVFlt~~~~~vP~~l~h~l~~~~vlhe~~v~l~v~~~~vP~V~~~~R~~v~~l~~--~ 521 (534)
T PF02705_consen 444 KLPLDDFLELLEDQSIPRVPGTAVFLTRSPDGVPPALLHNLKHNKVLHERVVFLTVKTEPVPRVPPEERYEVERLGP--D 521 (534)
T ss_pred CCCHHHHHHhhhhCCCceecceEEEEcCCCccCcHHHHHHHHhCCcccceEEEEEEEEeccCCCCCceEEEEEEecC--C
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999995 2
Q ss_pred CEEEEEEEeeecc
Q 040213 593 HMFHCAARYGYKD 605 (764)
Q Consensus 593 g~yRv~vrYGYmE 605 (764)
|+|||++||||||
T Consensus 522 g~~rv~~ryGf~e 534 (534)
T PF02705_consen 522 GFYRVTLRYGFME 534 (534)
T ss_pred CEEEEEEEecCCC
Confidence 9999999999998
No 9
>TIGR00911 2A0308 L-type amino acid transporter.
Probab=92.62 E-value=0.36 Score=55.54 Aligned_cols=47 Identities=26% Similarity=0.278 Sum_probs=27.1
Q ss_pred hhhhHHHHHHHHHHhhcccccccccc---hhhHHHHHHHHHHHHHHHhhc
Q 040213 202 VVLVAVAILVVLFSVQHFGVDKVGWL---FAPIVFVWFLLIGGIGIINIW 248 (764)
Q Consensus 202 Vv~is~~ILv~LF~~Q~~GT~kvg~~---FgPIm~vWF~~l~~~Gi~~I~ 248 (764)
...+++++++++..+.-+|....+++ +.-+.++=++.+.+.|++.+.
T Consensus 165 ~~~i~~~~i~~~~~ln~~Gvk~~~~~~~i~~~~~l~~l~~~ii~~~~~~~ 214 (501)
T TIGR00911 165 IRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVQLG 214 (501)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34577778888889999997655443 333222222333445555443
No 10
>COG0531 PotE Amino acid transporters [Amino acid transport and metabolism]
Probab=82.32 E-value=14 Score=41.42 Aligned_cols=176 Identities=17% Similarity=0.183 Sum_probs=102.7
Q ss_pred chhhhHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHhhcccCcceeEecCHHHHHHHHHhc---Cchhhcc
Q 040213 201 AVVLVAVAILVVLFSVQHFGVDKVGWLFAPIVFVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFRKG---HTWPSLG 277 (764)
Q Consensus 201 ~Vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~---~g~~~LG 277 (764)
....++.+++++++.++-+|....+++..-..++=++.+.++.+..+..+.......+++... ..+ .-...++
T Consensus 133 ~~~~~~~~~~~~~~~ln~~G~~~~~~~~~~~~~~~i~~~i~~~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 208 (466)
T COG0531 133 LIILIALALIALLTLLNLRGIKASAKINSIITILKIIILLIFIILGLFAFGFSNGNLFAPFNP----GGGSFGGILAAIL 208 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCCCccc----ccchHHHHHHHHH
Confidence 567889999999999999999888877666555555555555555555433322222221111 000 1233556
Q ss_pred ceeeeeccchhh--hc-cCCCCCccceeeehhhhhhHHHHHhhccchhhhccCCc-ccc-----Ccce---eccc-Ccch
Q 040213 278 SIILCITGTEAL--FA-DVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPD-HVH-----DVFY---RSIP-DIIY 344 (764)
Q Consensus 278 ~V~L~iTG~EAL--yA-DmGHFg~~~Ir~aw~~~V~P~L~l~Y~GQgA~Ll~~p~-~~~-----npF~---~~~P-~~~~ 344 (764)
.++.+.+|-|+. +| ++=+ .+|.|-.|-..-..-+.++-.+++-+....-|. +.. +|+. .... .+..
T Consensus 209 ~~~~~f~G~e~~~~~a~E~kn-p~r~ip~aii~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~g~~~~ 287 (466)
T COG0531 209 LAFFAFTGFEAIATLAEEVKN-PKRTIPRAIILSLLIVLILYILGALVIVGVLPAGDLAASAPSAPLALAALFGGGNWGA 287 (466)
T ss_pred HHHHHhhcHHHHHHHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHHHhCccHHHHhccCCCccHHHHHHHcCccHHH
Confidence 667888888754 33 2333 455566665554444444444444444433332 111 4543 2223 3666
Q ss_pred HHHHHHHHHHHHHHHhHHhhhhhhHHHHHHHcCCCCc
Q 040213 345 WPVFVVATAAAVVASQATISATFSLIKQAVALGCFPR 381 (764)
Q Consensus 345 ~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~~Pr 381 (764)
+-+.+++.+++.-+..+.+.+.--+..+.-+-|++|+
T Consensus 288 ~~i~~~~~~~~~~~~~~~~~~~sR~~~~~ardg~lP~ 324 (466)
T COG0531 288 IIIAILALLSLFGSLLAWILAVSRVLYAMARDGLLPK 324 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccH
Confidence 6666666666666667777777777777778999998
No 11
>PRK10655 potE putrescine transporter; Provisional
Probab=76.19 E-value=68 Score=36.27 Aligned_cols=42 Identities=14% Similarity=0.048 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHhhcccccccccc---hhhHHHHHHHHHHHHHHHh
Q 040213 205 VAVAILVVLFSVQHFGVDKVGWL---FAPIVFVWFLLIGGIGIIN 246 (764)
Q Consensus 205 is~~ILv~LF~~Q~~GT~kvg~~---FgPIm~vWF~~l~~~Gi~~ 246 (764)
+++++++.+..+.-+|+...+++ ..-.+++-++.+.+.|++.
T Consensus 126 ~~~~~l~~~~~ln~~g~~~~~~i~~i~~~~~l~~l~~~~i~~~~~ 170 (438)
T PRK10655 126 ATIGVLWLCTVANFGGARITGQISSVTVWGVIIPVVGLSIIGWFW 170 (438)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556677788899997666554 2233333344444455443
No 12
>PRK10435 cadB lysine/cadaverine antiporter; Provisional
Probab=74.53 E-value=73 Score=36.17 Aligned_cols=22 Identities=32% Similarity=0.311 Sum_probs=16.4
Q ss_pred HHHHHHHHHHhhcccccccccc
Q 040213 206 AVAILVVLFSVQHFGVDKVGWL 227 (764)
Q Consensus 206 s~~ILv~LF~~Q~~GT~kvg~~ 227 (764)
+++++..+..+..+|+...+++
T Consensus 125 ~~~i~~~~~~ln~~gvk~~~~i 146 (435)
T PRK10435 125 CIAIVWVFTFVNMLGGTWVSRL 146 (435)
T ss_pred HHHHHHHHHHHHHHhHHHHHHH
Confidence 4556667788999998876664
No 13
>TIGR03813 put_Glu_GABA_T putative glutamate/gamma-aminobutyrate antiporter. Members of this protein family are putative putative glutamate/gamma-aminobutyrate antiporters. Each member of the seed alignment is found adjacent to a glutamate decarboxylase, which converts glutamate (Glu) to gamma-aminobutyrate (GABA). However, the majority belong to genome contexts with a glutaminase (converts Gln to Glu) as well as the decarboxylase that converts Glu to GABA. The specificity of the transporter remains uncertain.
Probab=70.27 E-value=55 Score=37.60 Aligned_cols=19 Identities=21% Similarity=0.291 Sum_probs=14.2
Q ss_pred chHHHHHHHHHHHHHHHHh
Q 040213 481 GWVPLVIAAAFFISMSVWH 499 (764)
Q Consensus 481 GW~pl~ia~~~~~iM~tW~ 499 (764)
-|-+++++++++....-|.
T Consensus 434 ny~~~~~~~~~~~~~~~~~ 452 (474)
T TIGR03813 434 RYVGLLIGLAALFVTAPFL 452 (474)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4788888888777766665
No 14
>TIGR00909 2A0306 amino acid transporter.
Probab=70.21 E-value=29 Score=38.89 Aligned_cols=167 Identities=18% Similarity=0.154 Sum_probs=76.9
Q ss_pred hHHHHHHHHHHhhccccccc---ccchhhHHHHHHHHHHHHHHHhhcccCcceeEecCHHHHHHHHHhcCchhhccceee
Q 040213 205 VAVAILVVLFSVQHFGVDKV---GWLFAPIVFVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYWFFRKGHTWPSLGSIIL 281 (764)
Q Consensus 205 is~~ILv~LF~~Q~~GT~kv---g~~FgPIm~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~f~~~~~g~~~LG~V~L 281 (764)
++++++++...+..+|.... ...++.+.++=++.+.+.|+.+. ++.-+..+.|...-.+ ...+...+.
T Consensus 136 ~~i~~~~~~~~l~~~g~~~~~~~~~v~~~~~i~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~------~~~~~~~~~ 206 (429)
T TIGR00909 136 PALLIVLFLTYILYLGAKESGKVNDILVVLKVAALLLFAALGAIHF---ASNNYTPFMPMGFGGV------GAATALVFF 206 (429)
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhhHHHhhC---cHHhcCCCCCCcHHHH------HHHHHHHHH
Confidence 45667777788888886554 45566655554444444454432 2222222223211111 111223445
Q ss_pred eeccchhhh--ccCCCCCccceeeehhhhhhHHHHHhhccchhhhccC-C-c---cccCcce----ecccCcchHHHHHH
Q 040213 282 CITGTEALF--ADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKK-P-D---HVHDVFY----RSIPDIIYWPVFVV 350 (764)
Q Consensus 282 ~iTG~EALy--ADmGHFg~~~Ir~aw~~~V~P~L~l~Y~GQgA~Ll~~-p-~---~~~npF~----~~~P~~~~~P~~vl 350 (764)
+.+|=|+.- ++-=+-.+|.+.+|-..-+. ...+.|..-....... | + ..++|+. +...++..+-+.+.
T Consensus 207 af~G~e~~~~~~~E~~~p~r~ip~ai~~~~~-~~~v~Yil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 285 (429)
T TIGR00909 207 AFIGFEAISTAAEEVKNPERDIPKAIILSLI-VVTLLYVLVAAVILGAVPWRQLAGSTAPLSLVGYDLGQGIGGLILTAG 285 (429)
T ss_pred HHhhHHHHHhhHHhccCccccccHHHHHHHH-HHHHHHHHHHHHHhcCcCHHHhCCCCcHHHHHHHHhCchHHHHHHHHH
Confidence 555666543 23234455667766543222 2222244433222221 1 1 1223442 22223444434444
Q ss_pred HHHHHHHHHhHHhhhhhhHHHHHHHcCCCCc
Q 040213 351 ATAAAVVASQATISATFSLIKQAVALGCFPR 381 (764)
Q Consensus 351 AtlAtIIASQA~Isg~FSi~~Qai~Lg~~Pr 381 (764)
+.++..-+..+.+.+.==+....-+.|.+|+
T Consensus 286 ~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~ 316 (429)
T TIGR00909 286 AVFSIASVMLAGIYGTSRVLFAMSRDGLLPG 316 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCcH
Confidence 4444444444444444444445557899997
No 15
>PF13520 AA_permease_2: Amino acid permease; PDB: 3NCY_A 3GI8_C 3GIA_A 3GI9_C 3OB6_A 3L1L_A 3LRC_D 3LRB_B 4DJK_A 4DJI_A ....
Probab=68.81 E-value=25 Score=39.16 Aligned_cols=223 Identities=15% Similarity=0.150 Sum_probs=118.1
Q ss_pred hhhhHHHHHHHHHHhhcccccccccc---hhhHHH-HHHHHHHHHHHHhhcccCcce-----eEecCHHHHHHHHHhcCc
Q 040213 202 VVLVAVAILVVLFSVQHFGVDKVGWL---FAPIVF-VWFLLIGGIGIINIWKYDSSV-----LKAFSPVHVYWFFRKGHT 272 (764)
Q Consensus 202 Vv~is~~ILv~LF~~Q~~GT~kvg~~---FgPIm~-vWF~~l~~~Gi~~I~~~~P~V-----l~AlnP~ya~~f~~~~~g 272 (764)
...+++++++..+.+.-+|....+++ .+=+.+ +-++.+.+.|++...+ +..- ....+|.-.- .-
T Consensus 118 ~~~i~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~i~~~l~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~ 190 (426)
T PF13520_consen 118 QFLIAIILILLFTLLNLLGIKLSGKIQNILTVIKIVIPLLVLIILGIVSFSF-SGFNSLSFSLSTFFPSGWP------GF 190 (426)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTC-CHHH----SHSCSSCSSSS------HH
T ss_pred heeeeecccccceEeeechhhhhhhhhhhhhhhhhhhhhhhheeEEEeeecc-cccccccccccccCCcccc------ch
Confidence 45677888888889988887666554 333333 3445566667765543 1110 0111111000 11
Q ss_pred hhhccceeeeeccchhhhccCCCCCccceeeehhhhhhHHHHHhhccchhhhccCCcc----ccC------cceecc-cC
Q 040213 273 WPSLGSIILCITGTEALFADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLMKKPDH----VHD------VFYRSI-PD 341 (764)
Q Consensus 273 ~~~LG~V~L~iTG~EALyADmGHFg~~~Ir~aw~~~V~P~L~l~Y~GQgA~Ll~~p~~----~~n------pF~~~~-P~ 341 (764)
+..+...+.+.+|-|+.=.-.+-.-+|.+.+|=..-+.-+.++.-+..-++...-|.+ .+| .+++.. .+
T Consensus 191 ~~~~~~~~~~~~G~e~~~~~~~E~k~k~ip~ai~~~~~~~~i~y~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (426)
T PF13520_consen 191 LAGFSVAFFAFSGFEAIASLAEENKNKTIPRAIIISIIIVAIIYILFSIALLGALPDDELANSSNSPSPFAVLASAVGGS 270 (426)
T ss_dssp HHHHHHHGGGGTTTTHHHHGGGGSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTHCHHHTTTCHHCHHHHHHHHHHCC
T ss_pred hhHHHHHHhhcccccccccccccccchhheeecccchhHHHHHHhhhhheeeecccchhhhcccccccccchhhcccccc
Confidence 3345567778888887544444444466665544433333333333333333333321 112 222222 46
Q ss_pred cchHHHHHHHHHHHHHHHhHHhhhhhhHHHHHHHcCCCCceeEEecCCCcCCcccchhhHHHHHHHhh-ee--EEeec--
Q 040213 342 IIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRVKVMHTSKKYSSHIYIPEINWILMILCV-AV--TAGFK-- 416 (764)
Q Consensus 342 ~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~~Pr~~i~hTS~~~~GQIYIP~vNw~Lmi~~i-~v--v~~F~-- 416 (764)
+..+.+.+++.++++-+-.+.+.+.--++.+.-+-|.+|+ +..++++ +| .|..-.++...+. ++ ...|-
T Consensus 271 ~~~~~~~i~~~~~~~~~~~~~~~~~sR~l~~~a~d~~lP~-~~~~~~k--~~---~P~~a~~~~~~i~~i~~~~~~~~~~ 344 (426)
T PF13520_consen 271 WLAIIVSIAAILSLFGSINAFIFGASRLLYAMARDGVLPK-WFAKVNK--FG---TPYNAIILVAVISSILLLLFLFIPQ 344 (426)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSSG-GGGTTSS--SS---SCHHHHHHHHHHHHHHHHHTTTSSS
T ss_pred ccccccccccccccccccchhhcchhhcccccccccchhh-hhhhccc--cC---CceeeehhhhHHHHHHHHHHHhhhH
Confidence 8888888888888888777777777777777888899994 2333332 22 2554444433332 22 12332
Q ss_pred -CchhhhhhhhchhhhHHHHHH
Q 040213 417 -NQHQIGNACGFAVVIVMLVTT 437 (764)
Q Consensus 417 -~s~~l~~AYGiAV~~~M~iTT 437 (764)
+.+.+.+.+.++.....+++.
T Consensus 345 ~~~~~l~~~~~~~~~~~~~~~~ 366 (426)
T PF13520_consen 345 SSFDILVSLSSVGYLISYILVI 366 (426)
T ss_dssp SHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 334566666666655555553
No 16
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=66.46 E-value=24 Score=36.45 Aligned_cols=21 Identities=19% Similarity=0.240 Sum_probs=17.2
Q ss_pred CchHHHHHHHHHHHHHHHHhh
Q 040213 480 GGWVPLVIAAAFFISMSVWHY 500 (764)
Q Consensus 480 GGW~pl~ia~~~~~iM~tW~~ 500 (764)
.+|.-+++|++.+.+-+-|++
T Consensus 179 ~~~~~iiig~i~~~~~~~lkk 199 (206)
T PF06570_consen 179 PPWVYIIIGVIAFALRFYLKK 199 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 389999999999988866654
No 17
>PRK15049 L-asparagine permease; Provisional
Probab=61.61 E-value=1.3e+02 Score=34.99 Aligned_cols=22 Identities=23% Similarity=0.250 Sum_probs=15.4
Q ss_pred hHHHHHHHHHHhhccccccccc
Q 040213 205 VAVAILVVLFSVQHFGVDKVGW 226 (764)
Q Consensus 205 is~~ILv~LF~~Q~~GT~kvg~ 226 (764)
++.++++++..+.-+|....+.
T Consensus 147 ~~~~~~~l~~~iN~~gvk~~~~ 168 (499)
T PRK15049 147 FALAALTIVGTMNMIGVKWFAE 168 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 4566677778888888766554
No 18
>TIGR00907 2A0304 amino acid permease (GABA permease).
Probab=59.01 E-value=60 Score=37.27 Aligned_cols=21 Identities=29% Similarity=0.637 Sum_probs=16.6
Q ss_pred chHHHHHHHHHHHHHHHHhhh
Q 040213 481 GWVPLVIAAAFFISMSVWHYG 501 (764)
Q Consensus 481 GW~pl~ia~~~~~iM~tW~~G 501 (764)
-|.++++++++...+..|...
T Consensus 454 ny~~~~~~~~~~~~~~~~~~~ 474 (482)
T TIGR00907 454 NYAVVVFAGVLAISLVYWKYK 474 (482)
T ss_pred ChHhHHHHHHHHHHHHHheEe
Confidence 599999988888888877653
No 19
>TIGR00930 2a30 K-Cl cotransporter.
Probab=52.84 E-value=6.2e+02 Score=32.58 Aligned_cols=32 Identities=16% Similarity=0.263 Sum_probs=20.2
Q ss_pred hhhhHHHHHHHHHHhhcccccccccchhhHHHH
Q 040213 202 VVLVAVAILVVLFSVQHFGVDKVGWLFAPIVFV 234 (764)
Q Consensus 202 Vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~v 234 (764)
+-.++++++++++.+--+|....++ +..++++
T Consensus 203 ~~iia~i~l~ll~~In~~Gvk~~ak-~q~vl~v 234 (953)
T TIGR00930 203 IRIYGTVTVVVLLGISFAGMEWENK-AQVLFLV 234 (953)
T ss_pred chHHHHHHHHHHHHHHHhhHHHHHH-HHHHHHH
Confidence 3446777788888888888855443 3444333
No 20
>PRK10238 aromatic amino acid transporter; Provisional
Probab=52.68 E-value=1.5e+02 Score=33.93 Aligned_cols=43 Identities=30% Similarity=0.372 Sum_probs=24.9
Q ss_pred ccceeeeeccchh--hhccCCCCCccceeeehhhhhhHHHHHhhcc
Q 040213 276 LGSIILCITGTEA--LFADVCQFPVLSIQIAFATVVYPCLLLAYIG 319 (764)
Q Consensus 276 LG~V~L~iTG~EA--LyADmGHFg~~~Ir~aw~~~V~P~L~l~Y~G 319 (764)
++.++.+.+|-|+ ..|.=-+=.+|.|-+|=.. +.-.+.+.|++
T Consensus 206 ~~~~~~af~G~e~~~~~aeE~knP~r~iPrAi~~-~~~~i~~~y~~ 250 (456)
T PRK10238 206 MAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ-VIYRILIFYIG 250 (456)
T ss_pred HHHHHHHhcCHHHHHHHHHhhcChhhHHHHHHHH-HHHHHHHHHHH
Confidence 4456677788886 3444445666667776532 33444555654
No 21
>PRK11021 putative transporter; Provisional
Probab=52.09 E-value=3.7e+02 Score=30.16 Aligned_cols=29 Identities=17% Similarity=0.249 Sum_probs=22.2
Q ss_pred chhhhHHHHHHHHHHhhcccccccccchh
Q 040213 201 AVVLVAVAILVVLFSVQHFGVDKVGWLFA 229 (764)
Q Consensus 201 ~Vv~is~~ILv~LF~~Q~~GT~kvg~~Fg 229 (764)
...++++++++.+..+.-+|.+..+++-.
T Consensus 114 ~~~~~~~~~~~~~~~ln~~Gv~~~~~~~~ 142 (410)
T PRK11021 114 QLLLAELLTLALLWLLNLRGASSSANLQT 142 (410)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 34567788888889999999888776543
No 22
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=50.03 E-value=1.3e+02 Score=32.79 Aligned_cols=54 Identities=15% Similarity=0.078 Sum_probs=38.0
Q ss_pred hhhhhhchhhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH----HHHHHHHHHHhh
Q 040213 421 IGNACGFAVVIVMLVTTLIMILIMLLVWRCHWILVLIFTVLS----LLVEGTYFSAMI 474 (764)
Q Consensus 421 l~~AYGiAV~~~M~iTT~L~~~v~~~~w~~~~~~~~~~~~~f----~~id~~f~sanl 474 (764)
-=..||.+|-.+.++.++-+++.+....+.+.+.++++.+++ +.+|-..+|+.-
T Consensus 14 k~~~~G~~vl~ta~la~~s~~~a~~~~~~~~~~~ai~~glvwgl~I~~lDR~ivss~~ 71 (301)
T PF14362_consen 14 KYAGIGAAVLFTALLAGLSGGYALYTVFGGPVWAAIPFGLVWGLVIFNLDRFIVSSIR 71 (301)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 345788888888888888888888888887766665555544 446666665543
No 23
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=47.27 E-value=1.6e+02 Score=33.92 Aligned_cols=43 Identities=9% Similarity=-0.064 Sum_probs=25.0
Q ss_pred cCcchHHHHHHHHHHHHHHHhHHhhhhhhHHHHHHHcCCCCce
Q 040213 340 PDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRV 382 (764)
Q Consensus 340 P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~~Pr~ 382 (764)
.++...-+.+.+.+++.-+..+.+.+.--+..+.-+-|.+|+.
T Consensus 279 g~~~~~~i~i~~~is~~~~~~~~~~~~sR~~~amardg~lP~~ 321 (473)
T TIGR00905 279 GKWGAVLISLGLIISVLGSLLSWTMLAAEVPFSAAKDGLFPKI 321 (473)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHH
Confidence 3444443434344444445555666666666666788999974
No 24
>TIGR00908 2A0305 ethanolamine permease. The three genes used as the seed for this model (from Burkholderia pseudomallei, Pseudomonas aeruginosa and Clostridium acetobutylicum are all adjacent to genes for the catabolism of ethanolamine. Most if not all of the hits to this model have a similar arrangement of genes. This group is a member of the Amino Acid-Polyamine-Organocation (APC) Superfamily.
Probab=47.10 E-value=1.6e+02 Score=33.39 Aligned_cols=23 Identities=22% Similarity=0.455 Sum_probs=16.1
Q ss_pred hHHHHHHHHHHhhcccccccccc
Q 040213 205 VAVAILVVLFSVQHFGVDKVGWL 227 (764)
Q Consensus 205 is~~ILv~LF~~Q~~GT~kvg~~ 227 (764)
+++++++.+..+.-+|.+..+++
T Consensus 124 ~~~~~~~~~~~ln~~g~~~~~~i 146 (442)
T TIGR00908 124 AALVFYIVFIGINILGVGEAAKL 146 (442)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhH
Confidence 45566666777888888776664
No 25
>COG4059 MtrE Tetrahydromethanopterin S-methyltransferase, subunit E [Coenzyme metabolism]
Probab=46.90 E-value=20 Score=38.09 Aligned_cols=31 Identities=16% Similarity=0.546 Sum_probs=26.7
Q ss_pred cccCchHHHHHHHHHHHHHHHHhhhHHHHHH
Q 040213 477 IHRGGWVPLVIAAAFFISMSVWHYGTMKRHQ 507 (764)
Q Consensus 477 i~~GGW~pl~ia~~~~~iM~tW~~G~~~~~~ 507 (764)
=.+|||..++++.++..+..+|+|--+.+.+
T Consensus 258 ~i~~G~isiv~Gliiv~iLii~N~kvEv~AR 288 (304)
T COG4059 258 SIQGGWISIVAGLIIVLILIIWNRKVEVKAR 288 (304)
T ss_pred ccccchhhhHHHHHHHHHHHHhcchhhhhhh
Confidence 3489999999999999999999997666654
No 26
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=43.32 E-value=2.8e+02 Score=32.55 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=26.4
Q ss_pred hhhccceeeeeccchhh--hccCCCCCccceeeehhhhhhHHHHHhhccchhh
Q 040213 273 WPSLGSIILCITGTEAL--FADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAY 323 (764)
Q Consensus 273 ~~~LG~V~L~iTG~EAL--yADmGHFg~~~Ir~aw~~~V~P~L~l~Y~GQgA~ 323 (764)
+..+-+++.+.+|-|+. .|+==+-.+|.+-.|=...+.=+.++.++|--++
T Consensus 197 ~~~~~~~~faf~G~E~~a~~a~E~knP~r~~PrAi~~~~i~~~~l~~l~~~~i 249 (507)
T TIGR00910 197 LVVFVAFIGAYMGVEASASHINELENPGRDYPLAMILLMIAAICLDAIGGFSI 249 (507)
T ss_pred HHHHHHHHHHHhcHHHHHHHHHHccCCcccccHHHHHHHHHHHHHHHHHHHHH
Confidence 33333456677888865 4444455566655555443333444444443333
No 27
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=39.01 E-value=1.1e+02 Score=28.80 Aligned_cols=59 Identities=14% Similarity=0.133 Sum_probs=40.6
Q ss_pred chhHHHHHHHHHhhhhhccCccccCccccchhhhHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHHHhh
Q 040213 172 CSKIVLLVLVLVGSSMVIGDGILTPAISEAVVLVAVAILVVLFSVQHFGVDKVGWLFAPIVFVWFLLIGGIGIINI 247 (764)
Q Consensus 172 ~~~~~l~~l~l~G~~l~~gDgviTPAiS~~Vv~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~l~~~Gi~~I 247 (764)
..-.-+..+|.+|-+ .++|+-+.+.++..+=+++||+. .|--++++.=+++|+..+|..
T Consensus 37 ~~~~~l~~~g~IG~~--------------~v~pil~G~~lG~WLD~~~~t~~---~~tl~~lllGv~~G~~n~w~w 95 (100)
T TIGR02230 37 SIWEGLGMFGLIGWS--------------VAIPTLLGVAVGIWLDRHYPSPF---SWTLTMLIVGVVIGCLNAWHW 95 (100)
T ss_pred cHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHhhcCCCc---HHHHHHHHHHHHHHHHHHHHH
Confidence 334456667888888 58999999999999999999954 454445554444444444433
No 28
>KOG4742 consensus Predicted chitinase [General function prediction only]
Probab=37.22 E-value=15 Score=40.12 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=25.8
Q ss_pred cCCCCCccceeeehhhhhhHHHHHhhccchh-----hhccCCcccc-Cc
Q 040213 292 DVCQFPVLSIQIAFATVVYPCLLLAYIGQAA-----YLMKKPDHVH-DV 334 (764)
Q Consensus 292 DmGHFg~~~Ir~aw~~~V~P~L~l~Y~GQgA-----~Ll~~p~~~~-np 334 (764)
+=+++||.+||++|-. ..||+. =||+|||-+. ||
T Consensus 171 gk~Y~GRG~iQlsWNy---------NYG~ag~alg~dLL~~Pe~V~~np 210 (286)
T KOG4742|consen 171 GKSYYGRGPIQLSWNY---------NYGAAGKALGLDLLRNPELVAMNP 210 (286)
T ss_pred CCcccccCcccccccc---------cccHhHhhcCchhhcCcchhccCc
Confidence 4579999999999987 445543 4788999766 54
No 29
>TIGR00906 2A0303 cationic amino acid transport permease.
Probab=37.04 E-value=6.2e+02 Score=30.14 Aligned_cols=44 Identities=25% Similarity=0.508 Sum_probs=25.5
Q ss_pred hhhhHHHHHHHHHHhhccccccccc---chhhHHHHHHHHHHHHHHH
Q 040213 202 VVLVAVAILVVLFSVQHFGVDKVGW---LFAPIVFVWFLLIGGIGII 245 (764)
Q Consensus 202 Vv~is~~ILv~LF~~Q~~GT~kvg~---~FgPIm~vWF~~l~~~Gi~ 245 (764)
...+++++++++..+--+|+...++ .+.-+.++-++.+.+.|+.
T Consensus 161 ~~~~a~~ii~l~~~ln~~Gik~s~~v~~i~~~iki~~l~~~iv~g~~ 207 (557)
T TIGR00906 161 PDFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFT 207 (557)
T ss_pred chHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHhhhHHHh
Confidence 3445666777777788889766554 3443433334444455554
No 30
>PRK10249 phenylalanine transporter; Provisional
Probab=36.08 E-value=5.5e+02 Score=29.51 Aligned_cols=97 Identities=25% Similarity=0.314 Sum_probs=48.9
Q ss_pred HHHHHHHHHHhhcccccccccc---hhhHHHHHHHHHHHHHHHhhcccCcceeEecCHHHHHH---HHHhcCch----hh
Q 040213 206 AVAILVVLFSVQHFGVDKVGWL---FAPIVFVWFLLIGGIGIINIWKYDSSVLKAFSPVHVYW---FFRKGHTW----PS 275 (764)
Q Consensus 206 s~~ILv~LF~~Q~~GT~kvg~~---FgPIm~vWF~~l~~~Gi~~I~~~~P~Vl~AlnP~ya~~---f~~~~~g~----~~ 275 (764)
+.++++++..+.-+|....+++ +.=+.++..+.+.++|+.-+...++.- ..++.+..+ ++- .|| ..
T Consensus 139 ~~~~~~l~~~lN~~gv~~~~~i~~~~~~ikv~~i~~~i~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~--~g~~~~~~~ 214 (458)
T PRK10249 139 AAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGE--KASIDNLWRYGGFFA--TGWNGLILS 214 (458)
T ss_pred HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC--CCChhhccCCCCCCC--CcHHHHHHH
Confidence 5566667777888888665543 333344455555556665443312210 111111000 000 232 34
Q ss_pred ccceeeeeccchhh--hccCCCCCccceeeehh
Q 040213 276 LGSIILCITGTEAL--FADVCQFPVLSIQIAFA 306 (764)
Q Consensus 276 LG~V~L~iTG~EAL--yADmGHFg~~~Ir~aw~ 306 (764)
+..++.+.+|-|.. .|+=-+-.+|.|-.|=.
T Consensus 215 ~~~~~~af~G~e~~~~~a~E~~~P~k~iPrai~ 247 (458)
T PRK10249 215 LAVIMFSFGGLELIGITAAEARDPEKSIPKAVN 247 (458)
T ss_pred HHHHHHHHcCHHHHHHHHHHhcCHhhHHHHHHH
Confidence 55556777888864 55555666666665543
No 31
>PRK11387 S-methylmethionine transporter; Provisional
Probab=28.99 E-value=7e+02 Score=28.67 Aligned_cols=31 Identities=13% Similarity=0.226 Sum_probs=19.1
Q ss_pred cchhhHHHHHHHHhhhcceEecccccchhhhhhccCC
Q 040213 41 KNRLSALLLMRFAFKSLGVVYGDLGTSPMYVLYNTFP 77 (764)
Q Consensus 41 ~~~~~~~~~~~La~~alGVVyGDIGTSPLY~~~~~f~ 77 (764)
+++.+.+....++++++ |||..+........
T Consensus 13 ~r~L~~~~~~~l~ig~~------IG~Gif~~~g~~~~ 43 (471)
T PRK11387 13 KRTMKVRHLVMLSLGGV------IGTGLFFNTGYIIS 43 (471)
T ss_pred hhcCcHHHHHHHHHHhh------hhhHHHHHHHHHHH
Confidence 33556666666555433 89997666666654
No 32
>TIGR01773 GABAperm gamma-aminobutyrate permease. GabP is highly homologous to amino acid permeases from B. subtilis, E. coli, as well as to other members of the amino acid permease family (pfam00324). A member of the APC (amine-polyamine-choline) transporter superfamily, GABA permease possesses a "consensus amphiphatic region" (CAR) found to be evolutionarily conserved within this transport family. This amphiphatic region is located between helix 8 and cytoplasmic loop 8-9, forming a potential channel domain and suggested to play a significant role in ligand recognition and translocation. Unique to GABA permeases, a conserved cysteine residue (CYS-300, E.coli) located at the beginning of the amphiphatic domain, has been determined to be critical for catalytic specificity.
Probab=28.58 E-value=9.1e+02 Score=27.42 Aligned_cols=45 Identities=18% Similarity=0.222 Sum_probs=25.1
Q ss_pred hhHHHHHHHHHHhhcccccccccchhh---HHHHHHHHHHHHHHHhhc
Q 040213 204 LVAVAILVVLFSVQHFGVDKVGWLFAP---IVFVWFLLIGGIGIINIW 248 (764)
Q Consensus 204 ~is~~ILv~LF~~Q~~GT~kvg~~FgP---Im~vWF~~l~~~Gi~~I~ 248 (764)
.+++++++++..+.-+|+...+.+--. +.++-++.+.++|+..+.
T Consensus 128 ~~~~~~~~~~~~~n~~gv~~~~~~~~~~~~~ki~~l~~~ii~~~~~~~ 175 (452)
T TIGR01773 128 LFSLILTIVLTLTNLYSVKSYGEFEFWFALIKVIAIIAFIILGAVAIF 175 (452)
T ss_pred HHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356666666777888888777655433 223333333445554433
No 33
>KOG3643 consensus GABA receptor [Signal transduction mechanisms]
Probab=28.44 E-value=42 Score=38.95 Aligned_cols=64 Identities=17% Similarity=0.301 Sum_probs=46.8
Q ss_pred HcCCCCceeEEecCCCcCC----cccchhhHHHHHHHhheeEEeecCchhhhhhhhchhhhHHHHHHHHHHH
Q 040213 375 ALGCFPRVKVMHTSKKYSS----HIYIPEINWILMILCVAVTAGFKNQHQIGNACGFAVVIVMLVTTLIMIL 442 (764)
Q Consensus 375 ~Lg~~Pr~~i~hTS~~~~G----QIYIP~vNw~Lmi~~i~vv~~F~~s~~l~~AYGiAV~~~M~iTT~L~~~ 442 (764)
..|-.||+.+...=++..| |+|+|.+= +-++.=|---=|-++-++=-.++||.+..+||++...
T Consensus 225 sTG~Y~RL~l~F~l~Rnigf~ilQ~y~PS~L----iVilSWVSFWin~~a~pARv~lGITTVLTMTTl~t~~ 292 (459)
T KOG3643|consen 225 STGNYSRLSLSFQLRRNIGFYILQTYIPSTL----IVILSWVSFWINRDASPARVALGITTVLTMTTLMTST 292 (459)
T ss_pred ccccceeEEEEEEEEeeccEEEEeeecchhh----hhHHhHhHhhhccccchhheeeceehHHhHHHHHhhh
Confidence 3789999999999888888 99999862 1111122223355666677889999999999998764
No 34
>PRK11049 D-alanine/D-serine/glycine permease; Provisional
Probab=28.09 E-value=3.7e+02 Score=30.91 Aligned_cols=104 Identities=13% Similarity=0.117 Sum_probs=46.6
Q ss_pred ceeeeeccchhh--hccCCCCCccceeeehhhhhhHHHHHhhccchhhhc--cCCcc---ccCcceecc----cCcchHH
Q 040213 278 SIILCITGTEAL--FADVCQFPVLSIQIAFATVVYPCLLLAYIGQAAYLM--KKPDH---VHDVFYRSI----PDIIYWP 346 (764)
Q Consensus 278 ~V~L~iTG~EAL--yADmGHFg~~~Ir~aw~~~V~P~L~l~Y~GQgA~Ll--~~p~~---~~npF~~~~----P~~~~~P 346 (764)
.++.+.+|-|+. .|.==+-.+|.|..|-.. +.-...+-|.-....+. .++++ .++||-... -++...-
T Consensus 219 ~~~~af~G~e~~~~~a~E~knP~r~iPrai~~-~~~~~~~~y~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 297 (469)
T PRK11049 219 IAVFAFVGIELVGTTAAETKDPEKSLPRAINS-IPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAASV 297 (469)
T ss_pred HHHHHHhcHHHHHHHHHHhcCHhhHHHHHHHH-HHHHHHHHHHHHHHHHeeecCccccCccCCcHHHHHHHcCChhHHHH
Confidence 345556666653 232234556666666532 22233444444433332 12222 235653221 1222222
Q ss_pred HHHHHHHHHHHHHhHHhhhhhhHHHHHHHcCCCCce
Q 040213 347 VFVVATAAAVVASQATISATFSLIKQAVALGCFPRV 382 (764)
Q Consensus 347 ~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~~Pr~ 382 (764)
+.+++.++.+-+..+.+.+.=-+....-+-|.+|+.
T Consensus 298 ~~~~~~~s~~~~~~~~~~~~sR~l~a~ardg~lP~~ 333 (469)
T PRK11049 298 INFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA 333 (469)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH
Confidence 333333444444444444544555555578999963
No 35
>PF02660 G3P_acyltransf: Glycerol-3-phosphate acyltransferase; InterPro: IPR003811 This entry describes glycerol-3-phosphate acyltransferase. It catalyses the transfer of an acyl group from acyl-phosphate (acyl-PO4) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilises acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. ; GO: 0005886 plasma membrane
Probab=28.00 E-value=4.5e+02 Score=26.80 Aligned_cols=83 Identities=16% Similarity=0.273 Sum_probs=45.6
Q ss_pred EeecCchhhhhhhhchhhhHHHHH--HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhccccCchHHHHHHHH
Q 040213 413 AGFKNQHQIGNACGFAVVIVMLVT--TLIMILIMLLVWRCHWILVLIFTVLSLLVEGTYFSAMIFKIHRGGWVPLVIAAA 490 (764)
Q Consensus 413 ~~F~~s~~l~~AYGiAV~~~M~iT--T~L~~~v~~~~w~~~~~~~~~~~~~f~~id~~f~sanl~Ki~~GGW~pl~ia~~ 490 (764)
+.||--..+|.+.|.-....-..+ .+...++...++|....-++.....+... . ++ ++.+++..+..+
T Consensus 91 l~FkGGKGvAt~~G~ll~l~p~~~li~~~~~~~~~~~~r~~s~~s~~~~~~~~~~-~-~~--------~~~~~~~~~~~~ 160 (178)
T PF02660_consen 91 LKFKGGKGVATSLGVLLALSPWLALIALAVFLILLLITRYVSLASIIAFIILPIL-A-WL--------WGYSLAYVLFAI 160 (178)
T ss_pred hCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-H-HH--------HhCCHHHHHHHH
Confidence 468999999999997554443333 22333333334443322222211111111 1 11 667777777777
Q ss_pred HHHHHHHHhhhHHHH
Q 040213 491 FFISMSVWHYGTMKR 505 (764)
Q Consensus 491 ~~~iM~tW~~G~~~~ 505 (764)
+..++..|+.-++.+
T Consensus 161 ~l~~li~~~h~~Ni~ 175 (178)
T PF02660_consen 161 ILALLIIYRHRENIK 175 (178)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777788888776655
No 36
>PRK10746 putative transport protein YifK; Provisional
Probab=27.61 E-value=6.5e+02 Score=29.00 Aligned_cols=30 Identities=17% Similarity=0.061 Sum_probs=21.2
Q ss_pred hhhHHHHHHHHhhhcceEecccccchhhhhhccCCC
Q 040213 43 RLSALLLMRFAFKSLGVVYGDLGTSPMYVLYNTFPD 78 (764)
Q Consensus 43 ~~~~~~~~~La~~alGVVyGDIGTSPLY~~~~~f~~ 78 (764)
+.+.+....+++++. |||.-+..-+..+..
T Consensus 11 ~L~~~~~~~i~ig~~------IGtGlf~~~g~~l~~ 40 (461)
T PRK10746 11 GLEARHIELIALGGT------IGVGLFMGAASTLKW 40 (461)
T ss_pred cCcHHHHHHHHHHhh------hhhhHHHHhHHHHHh
Confidence 456677776766655 999988877777654
No 37
>KOG3145 consensus Cystine transporter Cystinosin [Amino acid transport and metabolism]
Probab=27.02 E-value=1.1e+02 Score=34.00 Aligned_cols=84 Identities=24% Similarity=0.388 Sum_probs=48.2
Q ss_pred hhhHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHHHHH----HhhcccCcceeEecCHHHHHHHHHhc-Cchhhcc
Q 040213 203 VLVAVAILVVLFSVQHFGVDKVGWLFAPIVFVWFLLIGGIGI----INIWKYDSSVLKAFSPVHVYWFFRKG-HTWPSLG 277 (764)
Q Consensus 203 v~is~~ILv~LF~~Q~~GT~kvg~~FgPIm~vWF~~l~~~Gi----~~I~~~~P~Vl~AlnP~ya~~f~~~~-~g~~~LG 277 (764)
+.+.++.+..+|++|-.+.+..+-. -.+||+. .+-. .-++||-|+.. .+|=++. .|| +.|
T Consensus 234 ialgil~i~~~f~~~~~~va~~~~~----~wL~f~~--~~syiKl~mTliKYiPQa~--------mN~tRKSt~gw-sIg 298 (372)
T KOG3145|consen 234 IALGILAIFWLFAVVFMYVAYWYVI----RWLAFLN--NLSYIKLAMTLIKYIPQAY--------MNFTRKSTVGW-SIG 298 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHH----HHHHHHH--HHHHHHHHHHHHHhhhHHh--------hcceecccccc-ccc
Confidence 3444444556666666554432211 1333332 2222 24566755543 2333333 787 679
Q ss_pred ceeeeeccchh-----------------hhccCCCCCccce
Q 040213 278 SIILCITGTEA-----------------LFADVCQFPVLSI 301 (764)
Q Consensus 278 ~V~L~iTG~EA-----------------LyADmGHFg~~~I 301 (764)
.|+|=.|||-| .|+|+|-||-.-+
T Consensus 299 nIlLDfTGG~~slLQMilQ~~N~~sw~~f~gnp~KfGLg~v 339 (372)
T KOG3145|consen 299 NILLDFTGGTASLLQMILQSSNDNSWDTFYGNPGKFGLGLV 339 (372)
T ss_pred cEEEEecccHHHHHHHHHHHhccccHHHHhcCchhhhhhhH
Confidence 99999999965 6899999986543
No 38
>PRK10580 proY putative proline-specific permease; Provisional
Probab=26.84 E-value=4.6e+02 Score=29.94 Aligned_cols=24 Identities=8% Similarity=0.084 Sum_probs=17.8
Q ss_pred cCchHHHHHHHHHHHHHHHHhhhH
Q 040213 479 RGGWVPLVIAAAFFISMSVWHYGT 502 (764)
Q Consensus 479 ~GGW~pl~ia~~~~~iM~tW~~G~ 502 (764)
.+.++.+.++.+.+.+.+.+..-.
T Consensus 423 p~~~~~~~~~~~~~~~~~~~y~~~ 446 (457)
T PRK10580 423 PDTRISLYVGFAWIVLLLIGWMFK 446 (457)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHH
Confidence 356778888888888888877653
No 39
>PRK10644 arginine:agmatin antiporter; Provisional
Probab=26.32 E-value=4.2e+02 Score=30.10 Aligned_cols=23 Identities=13% Similarity=0.264 Sum_probs=15.7
Q ss_pred hHHHHHHHHHHhhcccccccccc
Q 040213 205 VAVAILVVLFSVQHFGVDKVGWL 227 (764)
Q Consensus 205 is~~ILv~LF~~Q~~GT~kvg~~ 227 (764)
+.+++++++..+.-+|+...+++
T Consensus 128 ~~~~~~~~~~~ln~~gvk~~~~i 150 (445)
T PRK10644 128 TCVVVLWIFVLLNIVGPKMITRV 150 (445)
T ss_pred HHHHHHHHHHHHHHhchHHHHHH
Confidence 45556667778888887665543
No 40
>TIGR03428 ureacarb_perm permease, urea carboxylase system. A number of bacteria obtain nitrogen by biotin- and ATP-dependent urea degradation system distinct from urease. The two characterized proteins of this system are the enzymes urea carboxylase and allophanate hydrolase, but other, uncharacterized proteins co-occur as genes encoded nearby in multiple organisms. This family includes predicted permeases of the amino acid permease family, likely to transport either urea or a compound from which urea is derived. It is found so far only Actinobacteria, whereas a number of other species with the urea carboxylase have an adjacent ABC transporter operon.
Probab=25.78 E-value=1.1e+03 Score=27.24 Aligned_cols=26 Identities=23% Similarity=0.403 Sum_probs=17.7
Q ss_pred hhhhHHHHHHHHHHhhcccccccccc
Q 040213 202 VVLVAVAILVVLFSVQHFGVDKVGWL 227 (764)
Q Consensus 202 Vv~is~~ILv~LF~~Q~~GT~kvg~~ 227 (764)
...++++++++...+.-+|+...+++
T Consensus 144 ~~~~~~~~~~~~~~in~~g~k~~~~i 169 (475)
T TIGR03428 144 AVLLGSVLLVLTTVINCIGVEWMSRV 169 (475)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHHH
Confidence 34566667777778888887665543
No 41
>PF08733 PalH: PalH/RIM21; InterPro: IPR014844 PalH (also known as RIM21) is a transmembrane protein required for proteolytic cleavage of Rim101/PacC transcription factors which are activated by C-terminal proteolytic processing. Rim101/PacC family proteins play a key role in pH-dependent responses and PalH has been implicated as a pH sensor [].
Probab=25.44 E-value=3.6e+02 Score=30.45 Aligned_cols=140 Identities=21% Similarity=0.216 Sum_probs=86.1
Q ss_pred HhhhhhhHHHHHHHcCC-CCceeEEecCCCcCCcccchhhHHHHHHHhheeEEeec--C-----chhhhhhhhchhhhHH
Q 040213 362 TISATFSLIKQAVALGC-FPRVKVMHTSKKYSSHIYIPEINWILMILCVAVTAGFK--N-----QHQIGNACGFAVVIVM 433 (764)
Q Consensus 362 ~Isg~FSi~~Qai~Lg~-~Pr~~i~hTS~~~~GQIYIP~vNw~Lmi~~i~vv~~F~--~-----s~~l~~AYGiAV~~~M 433 (764)
+||-.|.-+.|..-+=. |||-| -+..|=.+.-+|+++..++-+..+ + .+....---.....-.
T Consensus 168 lis~~~l~l~qvqiv~rlF~R~~---------eK~~i~~vG~~L~i~~~il~ai~~f~~~~~~~~~~~~~lp~~~yl~~i 238 (348)
T PF08733_consen 168 LISNFFLQLAQVQIVIRLFPRQK---------EKRIIFWVGFILIILDQILWAINQFSYFDSDPNSFLDILPAFSYLFRI 238 (348)
T ss_pred HHHHHHHHHHHHHHHHHhhcccC---------cEEEEeeHHHHHHHHHHHHHHHHHhccCCCCccccccchHHHHHHHHH
Confidence 67888888888876544 58854 233466777777776655444333 2 2222222223344555
Q ss_pred HHHHHHHHHHHHHHHhhhh--------HHHHHHHHHHHHHHHHHHHHhhhccccCch---HHHHHHHHHHHHHHHHhhhH
Q 040213 434 LVTTLIMILIMLLVWRCHW--------ILVLIFTVLSLLVEGTYFSAMIFKIHRGGW---VPLVIAAAFFISMSVWHYGT 502 (764)
Q Consensus 434 ~iTT~L~~~v~~~~w~~~~--------~~~~~~~~~f~~id~~f~sanl~Ki~~GGW---~pl~ia~~~~~iM~tW~~G~ 502 (764)
.+-++....+..+.|.... +...++..+...+...||..-+.+..-=|| ++-+..++..++-+-|-.-=
T Consensus 239 al~~~ya~~v~~y~~~k~k~~~~~~~~~~L~il~~~~i~l~~vffI~dis~~~v~~w~~~~~~~~~~~~tVivWEWi~ri 318 (348)
T PF08733_consen 239 ALSTLYAAWVIYYIISKKKYCFDYKQMIPLAILNLLLILLPVVFFILDISNWWVSGWSEYFRWVLYVAATVIVWEWINRI 318 (348)
T ss_pred HHHHHHHHHHHHHHHhhhhhheecchHHHHHHHHHHHHHHHHHhheeEccchhhhhHHHHHHHHHHHHHhhhHHHhhhHH
Confidence 6667777777777665433 445566667777888899888888888888 66666666666655555444
Q ss_pred HHHHHHHH
Q 040213 503 MKRHQFEL 510 (764)
Q Consensus 503 ~~~~~~~~ 510 (764)
+.+.+.+.
T Consensus 319 e~lEr~~e 326 (348)
T PF08733_consen 319 ERLERKEE 326 (348)
T ss_pred HHHHHHHH
Confidence 44433333
No 42
>TIGR03810 arg_ornith_anti arginine/ornithine antiporter. Members of this protein family are the arginine/ornithine antiporter, ArcD. This exchanger of ornithine for arginine occurs in a system with arginine deiminase, ornithine carbamoyltransferase, and carbamate kinase, with together turn arginine to ornithine with the generation of ATP and release of CO2.
Probab=24.61 E-value=1.1e+03 Score=27.04 Aligned_cols=44 Identities=5% Similarity=-0.201 Sum_probs=29.9
Q ss_pred ccCcchHHHHHHHHHHHHHHHhHHhhhhhhHHHHHHHcCCCCce
Q 040213 339 IPDIIYWPVFVVATAAAVVASQATISATFSLIKQAVALGCFPRV 382 (764)
Q Consensus 339 ~P~~~~~P~~vlAtlAtIIASQA~Isg~FSi~~Qai~Lg~~Pr~ 382 (764)
..+|..+.+.+.+.+++.-+..+.+.+.=-+..+.-+-|.+|+.
T Consensus 274 ~g~~~~~~i~~~~~is~~~~~~~~~~~~sR~~~a~ardg~lP~~ 317 (468)
T TIGR03810 274 VGTWGAVLINIGLIISILGAWLSWTLLPAEIPLLMAKDKLMPKY 317 (468)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccHH
Confidence 34555555556666666666666666666677777788999965
No 43
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=24.24 E-value=1.1e+03 Score=26.79 Aligned_cols=53 Identities=19% Similarity=0.272 Sum_probs=28.8
Q ss_pred ccCccccchhhhHHHHHHHHHHhhccccc---ccccchhhHHHHHHHHHHHHHHHh
Q 040213 194 LTPAISEAVVLVAVAILVVLFSVQHFGVD---KVGWLFAPIVFVWFLLIGGIGIIN 246 (764)
Q Consensus 194 iTPAiS~~Vv~is~~ILv~LF~~Q~~GT~---kvg~~FgPIm~vWF~~l~~~Gi~~ 246 (764)
.+|.-......+++++++.+..+.-+|.+ |+...+.=+.++=++.+.++|+..
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~ln~~gv~~~~~v~~~~~~~~~~~l~~~ii~g~~~ 174 (445)
T PRK11357 119 LTPIDPLLGKFIAAGLIIAFMLLHLRSVEGGAAFQTLITIAKIIPFTIVIGLGIFW 174 (445)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34542222344566666777788888875 444444433344444455556654
No 44
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=21.97 E-value=90 Score=25.08 Aligned_cols=27 Identities=30% Similarity=0.883 Sum_probs=13.8
Q ss_pred HHHHHHHHhhhHHHHHHHHHhcCCChH
Q 040213 491 FFISMSVWHYGTMKRHQFELQSKVPIE 517 (764)
Q Consensus 491 ~~~iM~tW~~G~~~~~~~~~~~~~~~~ 517 (764)
+|.....|.+-++++.+++....+|++
T Consensus 21 ~F~gi~~w~~~~~~k~~~e~aa~lpl~ 47 (49)
T PF05545_consen 21 FFIGIVIWAYRPRNKKRFEEAANLPLD 47 (49)
T ss_pred HHHHHHHHHHcccchhhHHHHHccCcc
Confidence 333344455444445555555666665
No 45
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=20.81 E-value=29 Score=35.49 Aligned_cols=72 Identities=14% Similarity=0.164 Sum_probs=46.7
Q ss_pred cCchhhHHHHHHHhhhhcCCcEEEEeecEEEecCCChhhHHHHHHHHHHH---HhhhccccccccccCCCCeEEeeeEE
Q 040213 687 MISQDEIDELEFLTNSRDTGVVHILGKTVMMARRDSEFYKKILIDYIFTF---LRKICRENNAIFYCPRECLLNVGQVI 762 (764)
Q Consensus 687 ~~~~~v~~El~~L~~A~e~gvvY~LGr~~V~a~~~S~~~kk~~in~lF~F---LrrN~R~~~~~l~IP~~rvVEVGm~y 762 (764)
+..+++++.+++ ++++|..-++-.. -..++-..+..++=++++|.- ++++.|.+...+++|+++++=||.|.
T Consensus 46 ~~tpe~~~W~~e---~k~~gi~v~vvSN-n~e~RV~~~~~~l~v~fi~~A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL 120 (175)
T COG2179 46 DATPELRAWLAE---LKEAGIKVVVVSN-NKESRVARAAEKLGVPFIYRAKKPFGRAFRRALKEMNLPPEEVVMVGDQL 120 (175)
T ss_pred CCCHHHHHHHHH---HHhcCCEEEEEeC-CCHHHHHhhhhhcCCceeecccCccHHHHHHHHHHcCCChhHEEEEcchh
Confidence 334555555554 4777776555443 222222346666656655443 46788999999999999999999874
No 46
>PLN00083 photosystem II subunit R; Provisional
Probab=20.33 E-value=71 Score=29.51 Aligned_cols=33 Identities=18% Similarity=0.219 Sum_probs=23.7
Q ss_pred ccchhhhhhccCCCCCCCccceehhhHHHHHHHHHhhhh
Q 040213 65 GTSPMYVLYNTFPDGIKDTEDVIDALSLIIYTLTIIPLI 103 (764)
Q Consensus 65 GTSPLY~~~~~f~~~~~~~~~vlGvlSLIfWtL~liv~i 103 (764)
|-||+|+=.+-- ++-|.-.| -|++|+.++...+
T Consensus 56 gYSPIY~p~eWs----~sGD~Y~G--gL~~WA~tlaglL 88 (101)
T PLN00083 56 EYSPIYTPQEFK----TDGDKYEG--DLKLAAAAVAGVI 88 (101)
T ss_pred ccCCccChhhcC----CCcchhhc--cHHHHHHHHHHHH
Confidence 789999976653 23333445 7999999998765
Done!