BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040219
(100 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FYB5|DNJ11_ARATH Chaperone protein dnaJ 11, chloroplastic OS=Arabidopsis thaliana
GN=ATJ11 PE=1 SV=2
Length = 161
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 15/96 (15%)
Query: 9 FNFTAASGRNKKSPRAVSVEMPLMVPGTGGSLYEVLRIEPTTMISEIKTVYRSLVKVYHP 68
+ +T S R + PR ++ VP SLY+VL + +IK+ YR L ++ HP
Sbjct: 43 YTYTEDSPRLHQIPRRLTT-----VPA---SLYDVLEVPLGATSQDIKSAYRRLARICHP 94
Query: 69 DLSGNGR-------DFTKIHNAYETLSDPKARVVYD 97
D++G R +F KIH AY TLSDP+ R VYD
Sbjct: 95 DVAGTDRTSSSSADEFMKIHAAYCTLSDPEKRSVYD 130
>sp|Q50312|DNAJL_MYCPN DnaJ-like protein MG002 homolog OS=Mycoplasma pneumoniae (strain
ATCC 29342 / M129) GN=MPN_002 PE=4 SV=1
Length = 309
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 39 SLYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNGRD-FTKIHNAYETLSDPKARVVYD 97
+LY++L + T + EIKT Y+ L K YHPD++ G D F KI+NAY LSD + YD
Sbjct: 2 TLYDLLELPQTATLQEIKTAYKRLAKRYHPDINKQGADTFVKINNAYAVLSDTTQKAEYD 61
Query: 98 MSL 100
L
Sbjct: 62 AML 64
>sp|Q9SDN0|DNJ20_ARATH Chaperone protein dnaJ 20, chloroplastic OS=Arabidopsis thaliana
GN=ATJ20 PE=2 SV=2
Length = 197
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 40/68 (58%), Gaps = 6/68 (8%)
Query: 39 SLYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNGR------DFTKIHNAYETLSDPKA 92
S Y++L + + + EIK Y+ L + YHPD+S R F ++ AYETLSDP+
Sbjct: 66 SFYDLLGVTESVTLPEIKQAYKQLARKYHPDVSPPDRVEEYTDRFIRVQEAYETLSDPRR 125
Query: 93 RVVYDMSL 100
RV+YD L
Sbjct: 126 RVLYDRDL 133
>sp|P0DJM1|DNAJ_LISMO Chaperone protein DnaJ OS=Listeria monocytogenes serovar 1/2a
(strain ATCC BAA-679 / EGD-e) GN=dnaJ PE=3 SV=1
Length = 377
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDL---SGNGRDFTKIHNAYETLSDPKARVVYD 97
YEVL I + EIK YR L K YHPD+ +G F +I AYE LSDP+ R YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|B8DE39|DNAJ_LISMH Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4a
(strain HCC23) GN=dnaJ PE=3 SV=1
Length = 376
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDL---SGNGRDFTKIHNAYETLSDPKARVVYD 97
YEVL I + EIK YR L K YHPD+ +G F +I AYE LSDP+ R YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|G2K045|DNAJ_LISM4 Chaperone protein DnaJ OS=Listeria monocytogenes serotype 1/2a
(strain 10403S) GN=dnaJ PE=3 SV=1
Length = 377
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDL---SGNGRDFTKIHNAYETLSDPKARVVYD 97
YEVL I + EIK YR L K YHPD+ +G F +I AYE LSDP+ R YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|Q92BN9|DNAJ_LISIN Chaperone protein DnaJ OS=Listeria innocua serovar 6a (strain
CLIP 11262) GN=dnaJ PE=3 SV=1
Length = 376
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDL---SGNGRDFTKIHNAYETLSDPKARVVYD 97
YEVL I + EIK YR L K YHPD+ +G F +I AYE LSDP+ R YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4 OS=Homo sapiens GN=DNAJA4 PE=1
SV=1
Length = 397
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGN-GRDFTKIHNAYETLSDPKARVVYD 97
Y++L ++P+ EIK YR L YHPD + + G F I AYE LSDPK R VYD
Sbjct: 8 YDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDVYD 65
>sp|Q8RB67|DNAJ_THETN Chaperone protein DnaJ OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=dnaJ PE=3 SV=1
Length = 384
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 40 LYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNGRD----FTKIHNAYETLSDPKARVV 95
LYE+L ++ EIK YR L K YHPDL+ ++ F +I+ AYE LSDP+ R
Sbjct: 6 LYEILGVDRNASQEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDPQKRAQ 65
Query: 96 YD 97
YD
Sbjct: 66 YD 67
>sp|Q71ZJ8|DNAJ_LISMF Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain F2365) GN=dnaJ PE=3 SV=1
Length = 376
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDL---SGNGRDFTKIHNAYETLSDPKARVVYD 97
YEVL + + EIK YR L K YHPD+ +G F +I AYE LSDP+ R YD
Sbjct: 7 YEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|C1KVB9|DNAJ_LISMC Chaperone protein DnaJ OS=Listeria monocytogenes serotype 4b
(strain CLIP80459) GN=dnaJ PE=3 SV=1
Length = 376
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDL---SGNGRDFTKIHNAYETLSDPKARVVYD 97
YEVL + + EIK YR L K YHPD+ +G F +I AYE LSDP+ R YD
Sbjct: 7 YEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYD 66
>sp|Q9JMC3|DNJA4_MOUSE DnaJ homolog subfamily A member 4 OS=Mus musculus GN=Dnaja4 PE=2
SV=1
Length = 397
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGN-GRDFTKIHNAYETLSDPKARVVYD 97
Y++L ++P+ EIK YR L YHPD + + G F I AYE LSDPK R +YD
Sbjct: 8 YDILGVKPSASPEEIKKAYRKLALKYHPDKNPDEGEKFKLISQAYEVLSDPKKRDIYD 65
>sp|P47248|DNAJL_MYCGE DnaJ-like protein MG002 OS=Mycoplasma genitalium (strain ATCC 33530
/ G-37 / NCTC 10195) GN=MG002 PE=4 SV=1
Length = 310
Score = 57.0 bits (136), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 39 SLYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNG-RDFTKIHNAYETLSDPKARVVYD 97
+LY++L + T I EIK Y+ L K YHPD++ G + F +I+NAY LSDP + YD
Sbjct: 2 NLYDLLELPTTASIKEIKIAYKRLAKRYHPDVNKLGSQTFVEINNAYSILSDPNQKEKYD 61
Query: 98 MSL 100
L
Sbjct: 62 SML 64
>sp|O35824|DNJA2_RAT DnaJ homolog subfamily A member 2 OS=Rattus norvegicus GN=Dnaja2
PE=2 SV=1
Length = 412
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 40 LYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNGRD-FTKIHNAYETLSDPKARVVYD 97
LY++L + P +E+K YR L K YHPD + N D F +I AYE LS+P+ R +YD
Sbjct: 9 LYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|Q9QYJ0|DNJA2_MOUSE DnaJ homolog subfamily A member 2 OS=Mus musculus GN=Dnaja2 PE=1
SV=1
Length = 412
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 40 LYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNGRD-FTKIHNAYETLSDPKARVVYD 97
LY++L + P +E+K YR L K YHPD + N D F +I AYE LS+P+ R +YD
Sbjct: 9 LYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|O60884|DNJA2_HUMAN DnaJ homolog subfamily A member 2 OS=Homo sapiens GN=DNAJA2 PE=1
SV=1
Length = 412
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 40 LYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNGRD-FTKIHNAYETLSDPKARVVYD 97
LY++L + P +E+K YR L K YHPD + N D F +I AYE LS+P+ R +YD
Sbjct: 9 LYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|Q2HJ94|DNJA2_BOVIN DnaJ homolog subfamily A member 2 OS=Bos taurus GN=DNAJA2 PE=2
SV=1
Length = 412
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 40 LYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNGRD-FTKIHNAYETLSDPKARVVYD 97
LY++L + P +E+K YR L K YHPD + N D F +I AYE LS+P+ R +YD
Sbjct: 9 LYDILGVPPGASENELKKAYRKLAKEYHPDKNPNAGDKFKEISFAYEVLSNPEKRELYD 67
>sp|Q5NVI9|DNJA1_PONAB DnaJ homolog subfamily A member 1 OS=Pongo abelii GN=DNAJA1 PE=2
SV=1
Length = 396
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 39 SLYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGN-GRDFTKIHNAYETLSDPKARVVYD 97
+ Y+VL ++P E+K YR L YHPD + N G F +I AYE LSD K R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|P31689|DNJA1_HUMAN DnaJ homolog subfamily A member 1 OS=Homo sapiens GN=DNAJA1 PE=1
SV=2
Length = 397
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 39 SLYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGN-GRDFTKIHNAYETLSDPKARVVYD 97
+ Y+VL ++P E+K YR L YHPD + N G F +I AYE LSD K R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|Q5E954|DNJA1_BOVIN DnaJ homolog subfamily A member 1 OS=Bos taurus GN=DNAJA1 PE=2
SV=2
Length = 397
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 39 SLYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGN-GRDFTKIHNAYETLSDPKARVVYD 97
+ Y+VL ++P E+K YR L YHPD + N G F +I AYE LSD K R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|Q95JF4|DNAJ1_CHLAE DnaJ homolog subfamily A member 1 OS=Chlorocebus aethiops
GN=DNAJA1 PE=2 SV=1
Length = 397
Score = 55.8 bits (133), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 39 SLYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGN-GRDFTKIHNAYETLSDPKARVVYD 97
+ Y+VL ++P E+K YR L YHPD + N G F +I AYE LSD K R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYD 65
>sp|B5YAR4|DNAJ_DICT6 Chaperone protein DnaJ OS=Dictyoglomus thermophilum (strain ATCC
35947 / DSM 3960 / H-6-12) GN=dnaJ PE=3 SV=1
Length = 390
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 36 TGGSLYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGN---GRDFTKIHNAYETLSDPKA 92
T YE+L + EIK YR LV+ YHPDL+ + F +I+ AYE LSDP+
Sbjct: 3 TKKDYYEILGVPRNATQDEIKQAYRRLVRQYHPDLNKDPSAHEKFKEINEAYEVLSDPQK 62
Query: 93 RVVYD 97
R YD
Sbjct: 63 RAQYD 67
>sp|B2GBQ6|DNAJ_LACF3 Chaperone protein DnaJ OS=Lactobacillus fermentum (strain NBRC
3956 / LMG 18251) GN=dnaJ PE=3 SV=1
Length = 386
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 40 LYEVLRIEPTTMISEIKTVYRSLVKVYHPDLS---GNGRDFTKIHNAYETLSDPKARVVY 96
LY+VL ++ +EIK YR L YHPD++ G + F KI+ AYETLSD + R Y
Sbjct: 6 LYDVLGVKKDASEAEIKRAYRKLAAKYHPDVNHEPGAEKKFKKINEAYETLSDDQKRAQY 65
Query: 97 D 97
D
Sbjct: 66 D 66
>sp|P17631|DNAJ_BACSU Chaperone protein DnaJ OS=Bacillus subtilis (strain 168) GN=dnaJ
PE=2 SV=3
Length = 375
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDL---SGNGRDFTKIHNAYETLSDPKARVVYD 97
YEVL + + EIK YR L K YHPD+ +G+ F ++ AYETLSD + R YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRAHYD 66
>sp|Q8DKR7|DNAJ_THEEB Chaperone protein DnaJ OS=Thermosynechococcus elongatus (strain
BP-1) GN=dnaJ PE=3 SV=2
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 40 LYEVLRIEPTTMISEIKTVYRSLVKVYHPDLS---GNGRDFTKIHNAYETLSDPKARVVY 96
YE+L + + E+K YR L + YHPD++ G F +I+ AYE LSDP+AR Y
Sbjct: 5 FYEILGVSRSADAEELKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSDPQARANY 64
Query: 97 D 97
D
Sbjct: 65 D 65
>sp|P63036|DNJA1_RAT DnaJ homolog subfamily A member 1 OS=Rattus norvegicus GN=Dnaja1
PE=2 SV=1
Length = 397
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 39 SLYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGN-GRDFTKIHNAYETLSDPKARVVYD 97
+ Y+VL ++P E+K YR L YHPD + N G F +I AYE L+D K R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLADSKKRELYD 65
>sp|P63037|DNJA1_MOUSE DnaJ homolog subfamily A member 1 OS=Mus musculus GN=Dnaja1 PE=1
SV=1
Length = 397
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 39 SLYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGN-GRDFTKIHNAYETLSDPKARVVYD 97
+ Y+VL ++P E+K YR L YHPD + N G F +I AYE L+D K R +YD
Sbjct: 6 TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLADSKKRELYD 65
>sp|A8FFD1|DNAJ_BACP2 Chaperone protein DnaJ OS=Bacillus pumilus (strain SAFR-032)
GN=dnaJ PE=3 SV=1
Length = 377
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDL---SGNGRDFTKIHNAYETLSDPKARVVYD 97
YEVL + + EIK YR L K YHPD+ +G+ F ++ AYETLSD + R YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRSQYD 66
>sp|A0AIS3|DNAJ_LISW6 Chaperone protein DnaJ OS=Listeria welshimeri serovar 6b (strain
ATCC 35897 / DSM 20650 / SLCC5334) GN=dnaJ PE=3 SV=1
Length = 376
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDL---SGNGRDFTKIHNAYETLSDPKARVVYD 97
YEVL I + EIK YR L K YHPD+ +G F +I AYE LSD + R YD
Sbjct: 7 YEVLGISKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEVLSDSQKRAQYD 66
>sp|O66921|DNAJ2_AQUAE Chaperone protein DnaJ 2 OS=Aquifex aeolicus (strain VF5)
GN=dnaJ2 PE=3 SV=1
Length = 376
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 37/70 (52%), Gaps = 3/70 (4%)
Query: 32 MVPGTGGSLYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGN---GRDFTKIHNAYETLS 88
M T YE+L + EIK YR LV+ YHPD+ F +I+ AY+ LS
Sbjct: 1 MASSTKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEEKFKEINEAYQVLS 60
Query: 89 DPKARVVYDM 98
DP+ R +YDM
Sbjct: 61 DPEKRKLYDM 70
>sp|Q09912|PSI1_SCHPO Protein psi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=psi1 PE=2 SV=2
Length = 379
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 40 LYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNG-RDFTKIHNAYETLSDPKARVVYD 97
LY+ L + P +E+K YR L YHPD + NG + F +I AYE LSDP+ R +YD
Sbjct: 7 LYDCLEVRPEASEAELKKAYRKLALKYHPDKNPNGEKKFKEISLAYEVLSDPQRRKLYD 65
>sp|Q88VM1|DNAJ_LACPL Chaperone protein DnaJ OS=Lactobacillus plantarum (strain ATCC
BAA-793 / NCIMB 8826 / WCFS1) GN=dnaJ PE=3 SV=1
Length = 380
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 40 LYEVLRIEPTTMISEIKTVYRSLVKVYHPDLS---GNGRDFTKIHNAYETLSDPKARVVY 96
LY+VL +E EIK YR L K YHPDL+ G F ++ AYETL D + R Y
Sbjct: 6 LYKVLGVEKDASQDEIKKAYRKLSKKYHPDLNHEPGAEEKFKAVNEAYETLGDAQKRAQY 65
Query: 97 D 97
D
Sbjct: 66 D 66
>sp|A3DF24|DNAJ_CLOTH Chaperone protein DnaJ OS=Clostridium thermocellum (strain ATCC
27405 / DSM 1237) GN=dnaJ PE=3 SV=1
Length = 386
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNGR----DFTKIHNAYETLSDPKARVVY 96
YE+L ++ +EIK YR L K YHPD++ + F +I+ AYE LSDP+ R Y
Sbjct: 8 YEILGVDRGASDAEIKKAYRKLAKQYHPDMNPGDKAAEAKFKEINEAYEVLSDPQKRARY 67
Query: 97 D 97
D
Sbjct: 68 D 68
>sp|O74752|MAS5_SCHPO Mitochondrial protein import protein mas5 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mas5 PE=3 SV=1
Length = 407
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 40 LYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNGRD-FTKIHNAYETLSDPKARVVYD 97
LYEVL ++ T +E+K YR L YHPD + N D F +I AYE L+D + R YD
Sbjct: 7 LYEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAGDKFKEISRAYEILADEEKRATYD 65
>sp|Q65H55|DNAJ_BACLD Chaperone protein DnaJ OS=Bacillus licheniformis (strain DSM 13 /
ATCC 14580) GN=dnaJ PE=3 SV=1
Length = 375
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDL---SGNGRDFTKIHNAYETLSDPKARVVYD 97
YEVL + + EIK YR L K YHPD+ +G F ++ AYETLSD + R YD
Sbjct: 7 YEVLGVGKSASKDEIKKAYRKLSKKYHPDINKEAGAAEKFKEVKEAYETLSDDQKRAHYD 66
>sp|A7Z6W0|DNAJ_BACA2 Chaperone protein DnaJ OS=Bacillus amyloliquefaciens (strain
FZB42) GN=dnaJ PE=3 SV=1
Length = 375
Score = 53.5 bits (127), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDL---SGNGRDFTKIHNAYETLSDPKARVVYD 97
YEVL + + EIK YR L K YHPD+ SG F ++ AYE LSD + R YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKKYHPDINKESGADEKFKEVKEAYEALSDDQKRAQYD 66
>sp|Q5HNW7|DNAJ_STAEQ Chaperone protein DnaJ OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=dnaJ PE=3 SV=1
Length = 373
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/60 (46%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDLS---GNGRDFTKIHNAYETLSDPKARVVYD 97
YEVL + + EIK YR L K YHPD++ G F +I AYE LSD RV YD
Sbjct: 7 YEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRVNYD 66
>sp|B9MJZ0|DNAJ_CALBD Chaperone protein DnaJ OS=Caldicellulosiruptor bescii (strain
ATCC BAA-1888 / DSM 6725 / Z-1320) GN=dnaJ PE=3 SV=1
Length = 388
Score = 53.5 bits (127), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNGRD----FTKIHNAYETLSDPKARVVY 96
YE+L + EIK YR L K YHPD + ++ F +I+ AYE LSDP+ R +Y
Sbjct: 8 YEILGVPRNATEEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKRKLY 67
Query: 97 D 97
D
Sbjct: 68 D 68
>sp|B4F2V6|DNAJ_PROMH Chaperone protein DnaJ OS=Proteus mirabilis (strain HI4320)
GN=dnaJ PE=3 SV=1
Length = 378
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 40 LYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNGRD----FTKIHNAYETLSDPKARVV 95
YEVL + T EIK Y+ L YHPD + +D F +I AYE LSDP+ R
Sbjct: 6 FYEVLGLSKTADEKEIKRAYKRLAMKYHPDRNQGDKDSESKFKEIKEAYEVLSDPQKRAA 65
Query: 96 YD 97
YD
Sbjct: 66 YD 67
>sp|B0S1F7|DNAJ_FINM2 Chaperone protein DnaJ OS=Finegoldia magna (strain ATCC 29328)
GN=dnaJ PE=3 SV=1
Length = 372
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 39 SLYEVLRIEPTTMISEIKTVYRSLVKVYHPDL-SGNGR---DFTKIHNAYETLSDPKARV 94
+LYE+L + EIK YR L K YHPD+ SG+ F +I+ AYE L D + R
Sbjct: 3 NLYEILEVNENATQEEIKKSYRRLAKKYHPDINSGDSEAENKFKEINGAYEVLGDKEKRK 62
Query: 95 VYDM 98
YDM
Sbjct: 63 KYDM 66
>sp|Q05646|DNAJ_ERYRH Chaperone protein DnaJ OS=Erysipelothrix rhusiopathiae GN=dnaJ
PE=2 SV=1
Length = 370
Score = 52.8 bits (125), Expect = 6e-07, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 40 LYEVLRIEPTTMISEIKTVYRSLVKVYHPDLS---GNGRDFTKIHNAYETLSDPKARVVY 96
YE+L + + +EIK YR L K YHPD++ G F ++ AYE LSD + R Y
Sbjct: 7 FYEILGVSKSATDAEIKKAYRQLAKKYHPDINKEDGAEAKFKEVQEAYEVLSDSQKRANY 66
Query: 97 D 97
D
Sbjct: 67 D 67
>sp|Q5P9E0|DNAJ_ANAMM Chaperone protein DnaJ OS=Anaplasma marginale (strain St. Maries)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 36 TGGSLYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNGR----DFTKIHNAYETLSDPK 91
+G YE+L + EIK YR +V YHPD + + F KI AYE LS+P+
Sbjct: 2 SGNDYYEILEVSRNASAEEIKKSYRKMVFKYHPDKNPGDKKAEEKFKKISEAYEVLSNPE 61
Query: 92 ARVVYD 97
R YD
Sbjct: 62 KRAAYD 67
>sp|B9KH92|DNAJ_ANAMF Chaperone protein DnaJ OS=Anaplasma marginale (strain Florida)
GN=dnaJ PE=3 SV=1
Length = 379
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Query: 36 TGGSLYEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNGR----DFTKIHNAYETLSDPK 91
+G YE+L + EIK YR +V YHPD + + F KI AYE LS+P+
Sbjct: 2 SGNDYYEILEVSRNASAEEIKKSYRKMVFKYHPDKNPGDKKAEEKFKKISEAYEVLSNPE 61
Query: 92 ARVVYD 97
R YD
Sbjct: 62 KRAAYD 67
>sp|A4XKA5|DNAJ_CALS8 Chaperone protein DnaJ OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=dnaJ PE=3 SV=1
Length = 387
Score = 52.4 bits (124), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNGRD----FTKIHNAYETLSDPKARVVY 96
YE+L + EIK YR L K YHPD + ++ F +I+ AYE LSDP+ R Y
Sbjct: 8 YEILGVPRNATQEEIKRAYRRLAKQYHPDANPGNKEAEEKFKEINEAYEVLSDPEKRRKY 67
Query: 97 D 97
D
Sbjct: 68 D 68
>sp|A6WX07|DNAJ_OCHA4 Chaperone protein DnaJ OS=Ochrobactrum anthropi (strain ATCC
49188 / DSM 6882 / NCTC 12168) GN=dnaJ PE=3 SV=1
Length = 377
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNG----RDFTKIHNAYETLSDPKARVVY 96
YE L +E T +KT +R L YHPD + N R F +I AYETL DP+ R Y
Sbjct: 6 YEALGVERTADDKVLKTAFRKLAMEYHPDRNPNNPEAERKFKEIGEAYETLKDPQKRAAY 65
Query: 97 D 97
D
Sbjct: 66 D 66
>sp|Q5WHG0|DNAJ_BACSK Chaperone protein DnaJ OS=Bacillus clausii (strain KSM-K16)
GN=dnaJ PE=3 SV=1
Length = 372
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGN---GRDFTKIHNAYETLSDPKARVVYD 97
YEVL ++ + E+K YR L + YHPD++ F ++ AY+TLSDP+ + YD
Sbjct: 7 YEVLGVDRNASVEEVKKAYRKLARKYHPDVNKEEDAEAKFKEVKEAYDTLSDPQKKARYD 66
>sp|Q8G6C6|DNAJ_BIFLO Chaperone protein DnaJ OS=Bifidobacterium longum (strain NCC
2705) GN=dnaJ PE=3 SV=1
Length = 381
Score = 52.0 bits (123), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGNGRD--FTKIHNAYETLSDPKARVVYD 97
YE L +E EIK YR L + YHPD++G + F +++NAY+ LS+P R +YD
Sbjct: 5 YETLGVERGASDDEIKKAYRKLSRKYHPDIAGPEFEDKFKEVNNAYDVLSNPDKRRMYD 63
>sp|Q3AF07|DNAJ_CARHZ Chaperone protein DnaJ OS=Carboxydothermus hydrogenoformans
(strain Z-2901 / DSM 6008) GN=dnaJ PE=3 SV=1
Length = 381
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 4/61 (6%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDLSGN----GRDFTKIHNAYETLSDPKARVVY 96
YE+L + EIK YR L + YHPD++ + F +I+ AYE LSDP+ R Y
Sbjct: 6 YEILGVARNATPEEIKKAYRKLARKYHPDVNKDDPNAAEKFKEINEAYEVLSDPEKRARY 65
Query: 97 D 97
D
Sbjct: 66 D 66
>sp|Q49Y21|DNAJ_STAS1 Chaperone protein DnaJ OS=Staphylococcus saprophyticus subsp.
saprophyticus (strain ATCC 15305 / DSM 20229) GN=dnaJ
PE=3 SV=1
Length = 378
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 41 YEVLRIEPTTMISEIKTVYRSLVKVYHPDLS---GNGRDFTKIHNAYETLSDPKARVVYD 97
YEVL + + EIK YR L K YHPD++ G F +I AYE LSD R YD
Sbjct: 7 YEVLGVSKSASKDEIKKAYRKLSKQYHPDINKEEGADEKFKEISEAYEVLSDENKRANYD 66
>sp|B1XQF6|DNAJ_SYNP2 Chaperone protein DnaJ OS=Synechococcus sp. (strain ATCC 27264 /
PCC 7002 / PR-6) GN=dnaJ PE=3 SV=1
Length = 378
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 37 GGSLYEVLRIEPTTMISEIKTVYRSLVKVYHPDLS---GNGRDFTKIHNAYETLSDPKAR 93
G YE+L + E+K YR L + YHPD++ G F +I+ AYE LS+P+ R
Sbjct: 2 AGDFYEILGVSRDCGKDELKRAYRRLARQYHPDVNKDPGAEEKFKEINRAYEVLSEPETR 61
Query: 94 VVYD 97
YD
Sbjct: 62 ARYD 65
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,042,220
Number of Sequences: 539616
Number of extensions: 1353299
Number of successful extensions: 4448
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 291
Number of HSP's that attempted gapping in prelim test: 2911
Number of HSP's gapped (non-prelim): 982
length of query: 100
length of database: 191,569,459
effective HSP length: 69
effective length of query: 31
effective length of database: 154,335,955
effective search space: 4784414605
effective search space used: 4784414605
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)