Your job contains 1 sequence.
>040221
MQSPEDSVPTPRVPAENDGSGDGREAAVAKTAGFVVFSGIAISILKALNPLNKNRNETTQ
PQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSID
AIKEANGLSGDTIYAGKKLIIP
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040221
(142 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q722W8 - symbol:iap "Protein P60" species:26566... 133 1.3e-09 2
UNIPROTKB|Q81WS5 - symbol:BAS3606 "Putative cell wall hyd... 125 1.2e-07 1
TIGR_CMR|BA_3893 - symbol:BA_3893 "cell wall hydrolase, p... 125 1.2e-07 1
TIGR_CMR|CHY_0674 - symbol:CHY_0674 "putative cell-wall a... 114 2.2e-06 1
ZFIN|ZDB-GENE-060929-1094 - symbol:lysmd1 "LysM, putative... 99 5.4e-05 1
UNIPROTKB|Q1JQA8 - symbol:LYSMD2 "LysM and putative pepti... 92 7.0e-05 2
UNIPROTKB|F1MNB9 - symbol:LYSMD1 "LysM and putative pepti... 96 0.00014 1
UNIPROTKB|E2RD13 - symbol:LYSMD1 "Uncharacterized protein... 96 0.00014 1
UNIPROTKB|F1SSY1 - symbol:LYSMD1 "Uncharacterized protein... 96 0.00014 1
UNIPROTKB|Q9KV14 - symbol:VC_0344 "N-acetylmuramoyl-L-ala... 98 0.00041 1
TIGR_CMR|VC_0344 - symbol:VC_0344 "N-acetylmuramoyl-L-ala... 98 0.00041 1
UNIPROTKB|A0JNI1 - symbol:LYSMD1 "LysM and putative pepti... 94 0.00070 1
UNIPROTKB|Q96S90 - symbol:LYSMD1 "LysM and putative pepti... 94 0.00072 1
>UNIPROTKB|Q722W8 [details] [associations]
symbol:iap "Protein P60" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002482
InterPro:IPR018392 Pfam:PF01476 SMART:SM00257 Pfam:PF00877
EMBL:AE017262 GenomeReviews:AE017262_GR GO:GO:0016998
eggNOG:COG0791 InterPro:IPR000064 InterPro:IPR003646 Pfam:PF08239
SMART:SM00287 RefSeq:YP_013216.1 ProteinModelPortal:Q722W8
GeneID:2797439 KEGG:lmf:LMOf2365_0611 PATRIC:20322425
HOGENOM:HOG000244932 OMA:TIWALSV ProtClustDB:PRK13914
Uniprot:Q722W8
Length = 477
Score = 133 (51.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 35/95 (36%), Positives = 43/95 (45%)
Query: 50 PLNKNRNETT--QPQPIAESTXXXXXXXXXXXVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE T P + K P T V+ GD
Sbjct: 150 PTQEVKKETTIQQAAPAAE-TKTEVKQTTQATTPAPKVAETKETPVVDQNATTHAVKSGD 208
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T+W LS KYGVS+ I N LS +IY G+KL I
Sbjct: 209 TIWALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 124 (48.7 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 17 TAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 69
Score = 36 (17.7 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 24 REAAVAKTAGFVVFSGIAISILKA 47
++A +A TAG V + A +I A
Sbjct: 4 KKATIAATAGIAVTAFAAPTIASA 27
>UNIPROTKB|Q81WS5 [details] [associations]
symbol:BAS3606 "Putative cell wall hydrolase" species:1392
"Bacillus anthracis" [GO:0016787 "hydrolase activity" evidence=ISS]
[GO:0016998 "cell wall macromolecule catabolic process"
evidence=ISS] InterPro:IPR002482 InterPro:IPR011105
InterPro:IPR018392 Pfam:PF01476 Pfam:PF07486 SMART:SM00257
GO:GO:0005618 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016787 GO:GO:0009847 GO:GO:0016998
HOGENOM:HOG000055262 KO:K01449 RefSeq:NP_846140.1
RefSeq:YP_020530.1 RefSeq:YP_029859.1 HSSP:P23931
ProteinModelPortal:Q81WS5 DNASU:1087659
EnsemblBacteria:EBBACT00000008099 EnsemblBacteria:EBBACT00000015268
EnsemblBacteria:EBBACT00000022994 GeneID:1087659 GeneID:2815049
GeneID:2849605 KEGG:ban:BA_3893 KEGG:bar:GBAA_3893 KEGG:bat:BAS3606
OMA:KGEPYAG ProtClustDB:CLSK918215
BioCyc:BANT260799:GJAJ-3665-MONOMER
BioCyc:BANT261594:GJ7F-3782-MONOMER Uniprot:Q81WS5
Length = 265
Score = 125 (49.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 25/58 (43%), Positives = 40/58 (68%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVQ--KNDTLWGISKQYGVSIQSIKQANHKGNDQTFIGEQLHIP 74
>TIGR_CMR|BA_3893 [details] [associations]
symbol:BA_3893 "cell wall hydrolase, putative"
species:198094 "Bacillus anthracis str. Ames" [GO:0016787
"hydrolase activity" evidence=ISS] [GO:0016998 "cell wall
macromolecule catabolic process" evidence=ISS] InterPro:IPR002482
InterPro:IPR011105 InterPro:IPR018392 Pfam:PF01476 Pfam:PF07486
SMART:SM00257 GO:GO:0005618 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0016787 GO:GO:0009847 GO:GO:0016998
HOGENOM:HOG000055262 KO:K01449 RefSeq:NP_846140.1
RefSeq:YP_020530.1 RefSeq:YP_029859.1 HSSP:P23931
ProteinModelPortal:Q81WS5 DNASU:1087659
EnsemblBacteria:EBBACT00000008099 EnsemblBacteria:EBBACT00000015268
EnsemblBacteria:EBBACT00000022994 GeneID:1087659 GeneID:2815049
GeneID:2849605 KEGG:ban:BA_3893 KEGG:bar:GBAA_3893 KEGG:bat:BAS3606
OMA:KGEPYAG ProtClustDB:CLSK918215
BioCyc:BANT260799:GJAJ-3665-MONOMER
BioCyc:BANT261594:GJ7F-3782-MONOMER Uniprot:Q81WS5
Length = 265
Score = 125 (49.1 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 25/58 (43%), Positives = 40/58 (68%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVQ--KNDTLWGISKQYGVSIQSIKQANHKGNDQTFIGEQLHIP 74
>TIGR_CMR|CHY_0674 [details] [associations]
symbol:CHY_0674 "putative cell-wall associated
endopeptidase" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0009253 "peptidoglycan catabolic process" evidence=ISS]
[GO:0009405 "pathogenesis" evidence=ISS] [GO:0042834 "peptidoglycan
binding" evidence=ISS] InterPro:IPR002482 InterPro:IPR018392
Pfam:PF01476 SMART:SM00257 Pfam:PF00877 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0016998 eggNOG:COG0791
HOGENOM:HOG000229978 InterPro:IPR000064 RefSeq:YP_359529.1
ProteinModelPortal:Q3AEA5 STRING:Q3AEA5 GeneID:3727899
KEGG:chy:CHY_0674 PATRIC:21274483 OMA:VSEGRNE
ProtClustDB:CLSK2772347 BioCyc:CHYD246194:GJCN-674-MONOMER
Uniprot:Q3AEA5
Length = 274
Score = 114 (45.2 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T+ + GD LW L+R+Y +++AIK+AN L + + G+KL+IP
Sbjct: 27 TITVKSGDNLWLLARRYNTTVEAIKKANNLKSEALKPGQKLVIP 70
Score = 99 (39.9 bits), Expect = 9.9e-05, P = 9.9e-05
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 83 PSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P T + +S +V IV+ GDTLW +++K+ +++D +K N L + + G+KL++
Sbjct: 70 PGKSTATAVSRSSSGSSVYIVKAGDTLWDIAKKFNLTVDELKRLNNLKSEKLSIGQKLLV 129
>ZFIN|ZDB-GENE-060929-1094 [details] [associations]
symbol:lysmd1 "LysM, putative
peptidoglycan-binding, domain containing 1" species:7955 "Danio
rerio" [GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR002482
InterPro:IPR018392 Pfam:PF01476 SMART:SM00257
ZFIN:ZDB-GENE-060929-1094 GO:GO:0016998 CTD:388695 eggNOG:NOG44631
HOGENOM:HOG000290644 HOVERGEN:HBG079723 OrthoDB:EOG43N7DW
EMBL:BC124311 IPI:IPI00771313 RefSeq:NP_001070218.1
UniGene:Dr.83419 ProteinModelPortal:Q08CB1 SMR:Q08CB1 GeneID:791996
KEGG:dre:791996 InParanoid:Q08CB1 NextBio:20930879
ArrayExpress:Q08CB1 Uniprot:Q08CB1
Length = 211
Score = 99 (39.9 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 90 SEPEPASCRTVE-IVR-GDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
S P R +E IV+ G+TL GLS KYGVS++ IK AN L + ++I+ + L +P
Sbjct: 30 SSQSPVRQRRIEHIVQPGETLQGLSLKYGVSMEQIKRANRLYTNESIFLKESLFVP 85
>UNIPROTKB|Q1JQA8 [details] [associations]
symbol:LYSMD2 "LysM and putative peptidoglycan-binding
domain-containing protein 2" species:9913 "Bos taurus" [GO:0016998
"cell wall macromolecule catabolic process" evidence=IEA]
InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476 SMART:SM00257
GO:GO:0016998 HOGENOM:HOG000290644 HOVERGEN:HBG079723
GeneTree:ENSGT00520000055632 EMBL:BC116100 IPI:IPI00707636
RefSeq:NP_001068953.1 UniGene:Bt.18507 ProteinModelPortal:Q1JQA8
SMR:Q1JQA8 PRIDE:Q1JQA8 Ensembl:ENSBTAT00000023518 GeneID:511013
KEGG:bta:511013 CTD:256586 eggNOG:NOG25663 InParanoid:Q1JQA8
OMA:QDIEGPS OrthoDB:EOG4F4SC5 NextBio:20869727 Uniprot:Q1JQA8
Length = 215
Score = 92 (37.4 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 21/39 (53%), Positives = 27/39 (69%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
GDTL G++ KYGVS++ IK AN L + D I+ K L IP
Sbjct: 79 GDTLQGIALKYGVSMEQIKRANKLFTNDCIFLKKTLNIP 117
Score = 36 (17.7 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 2 QSPEDSVPTPRVPAENDGSGDGREAAVA 29
+ P S P+P P GS + EA ++
Sbjct: 16 REPRPSAPSPPPPHSRLGS-EAEEAELS 42
>UNIPROTKB|F1MNB9 [details] [associations]
symbol:LYSMD1 "LysM and putative peptidoglycan-binding
domain-containing protein 1" species:9913 "Bos taurus" [GO:0016998
"cell wall macromolecule catabolic process" evidence=IEA]
InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476 SMART:SM00257
GO:GO:0016998 IPI:IPI00824412 UniGene:Bt.58596 OMA:RMQQRAV
GeneTree:ENSGT00520000055632 EMBL:DAAA02007252
Ensembl:ENSBTAT00000027183 Uniprot:F1MNB9
Length = 225
Score = 96 (38.9 bits), Expect = 0.00014, P = 0.00014
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
++ GDTL GL+ KYGV+++ IK AN L + D+I+ K L IP
Sbjct: 43 QLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIP 85
>UNIPROTKB|E2RD13 [details] [associations]
symbol:LYSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016998 "cell wall macromolecule catabolic
process" evidence=IEA] InterPro:IPR002482 InterPro:IPR018392
Pfam:PF01476 SMART:SM00257 GO:GO:0016998 CTD:388695 OMA:RMQQRAV
GeneTree:ENSGT00520000055632 EMBL:AAEX03011056 RefSeq:XP_851253.1
ProteinModelPortal:E2RD13 Ensembl:ENSCAFT00000019829 GeneID:608985
KEGG:cfa:608985 NextBio:20894605 Uniprot:E2RD13
Length = 227
Score = 96 (38.9 bits), Expect = 0.00014, P = 0.00014
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
++ GDTL GL+ KYGV+++ IK AN L + D+I+ K L IP
Sbjct: 43 QLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIP 85
>UNIPROTKB|F1SSY1 [details] [associations]
symbol:LYSMD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
SMART:SM00257 GO:GO:0016998 CTD:388695 OMA:RMQQRAV
GeneTree:ENSGT00520000055632 EMBL:CU138569 RefSeq:NP_001230430.1
UniGene:Ssc.3652 Ensembl:ENSSSCT00000029303 GeneID:100154705
KEGG:ssc:100154705 Uniprot:F1SSY1
Length = 227
Score = 96 (38.9 bits), Expect = 0.00014, P = 0.00014
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
++ GDTL GL+ KYGV+++ IK AN L + D+I+ K L IP
Sbjct: 43 QLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIP 85
>UNIPROTKB|Q9KV14 [details] [associations]
symbol:VC_0344 "N-acetylmuramoyl-L-alanine amidase"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008745 "N-acetylmuramoyl-L-alanine amidase activity"
evidence=ISS] [GO:0016998 "cell wall macromolecule catabolic
process" evidence=ISS] InterPro:IPR002482 InterPro:IPR002508
InterPro:IPR018392 Pfam:PF01476 Pfam:PF01520 SMART:SM00257
SMART:SM00646 EMBL:AE003852 GenomeReviews:AE003852_GR KO:K01448
GO:GO:0008745 GO:GO:0009253 Gene3D:3.40.630.40 InterPro:IPR021731
Pfam:PF11741 GO:GO:0016998 PIR:H82333 RefSeq:NP_229998.1
ProteinModelPortal:Q9KV14 DNASU:2615057 GeneID:2615057
KEGG:vch:VC0344 PATRIC:20079761 OMA:LWRAPDN ProtClustDB:CLSK873941
Uniprot:Q9KV14
Length = 581
Score = 98 (39.6 bits), Expect = 0.00041, P = 0.00041
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ RG+++ ++ +YGVS+DA+K+AN L TI G+ L IP
Sbjct: 419 KVQRGESIGLIANQYGVSVDALKKANNLKSSTISVGQLLTIP 460
>TIGR_CMR|VC_0344 [details] [associations]
symbol:VC_0344 "N-acetylmuramoyl-L-alanine amidase"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008745
"N-acetylmuramoyl-L-alanine amidase activity" evidence=ISS]
[GO:0016998 "cell wall macromolecule catabolic process"
evidence=ISS] InterPro:IPR002482 InterPro:IPR002508
InterPro:IPR018392 Pfam:PF01476 Pfam:PF01520 SMART:SM00257
SMART:SM00646 EMBL:AE003852 GenomeReviews:AE003852_GR KO:K01448
GO:GO:0008745 GO:GO:0009253 Gene3D:3.40.630.40 InterPro:IPR021731
Pfam:PF11741 GO:GO:0016998 PIR:H82333 RefSeq:NP_229998.1
ProteinModelPortal:Q9KV14 DNASU:2615057 GeneID:2615057
KEGG:vch:VC0344 PATRIC:20079761 OMA:LWRAPDN ProtClustDB:CLSK873941
Uniprot:Q9KV14
Length = 581
Score = 98 (39.6 bits), Expect = 0.00041, P = 0.00041
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ RG+++ ++ +YGVS+DA+K+AN L TI G+ L IP
Sbjct: 419 KVQRGESIGLIANQYGVSVDALKKANNLKSSTISVGQLLTIP 460
>UNIPROTKB|A0JNI1 [details] [associations]
symbol:LYSMD1 "LysM and putative peptidoglycan-binding
domain-containing protein 1" species:9913 "Bos taurus" [GO:0016998
"cell wall macromolecule catabolic process" evidence=IEA]
InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476 SMART:SM00257
GO:GO:0016998 EMBL:BC126694 IPI:IPI00824412 RefSeq:NP_001071366.1
UniGene:Bt.58596 ProteinModelPortal:A0JNI1 SMR:A0JNI1 PRIDE:A0JNI1
GeneID:510653 KEGG:bta:510653 CTD:388695 eggNOG:NOG44631
HOGENOM:HOG000290644 HOVERGEN:HBG079723 InParanoid:A0JNI1
OrthoDB:EOG43N7DW NextBio:20869551 Uniprot:A0JNI1
Length = 225
Score = 94 (38.1 bits), Expect = 0.00070, P = 0.00070
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
++ GDTL GL+ KYGV+++ IK AN L + D+I+ K L IP
Sbjct: 43 QLAPGDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLHIP 85
>UNIPROTKB|Q96S90 [details] [associations]
symbol:LYSMD1 "LysM and putative peptidoglycan-binding
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016998 "cell wall macromolecule catabolic process"
evidence=IEA] InterPro:IPR002482 InterPro:IPR018392 Pfam:PF01476
SMART:SM00257 GO:GO:0016998 EMBL:AL592424 CTD:388695
eggNOG:NOG44631 HOGENOM:HOG000290644 HOVERGEN:HBG079723
OrthoDB:EOG43N7DW EMBL:AY037156 EMBL:AK298706 EMBL:AL122088
EMBL:BX647911 EMBL:BC031649 IPI:IPI00045531 IPI:IPI00909116
RefSeq:NP_001130015.1 RefSeq:NP_997716.1 UniGene:Hs.591482 PDB:2DJP
PDBsum:2DJP ProteinModelPortal:Q96S90 SMR:Q96S90 PhosphoSite:Q96S90
DMDM:74752122 PRIDE:Q96S90 DNASU:388695 Ensembl:ENST00000368908
Ensembl:ENST00000440902 GeneID:388695 KEGG:hsa:388695
UCSC:uc001ewy.3 UCSC:uc010pcr.2 GeneCards:GC01M151132
HGNC:HGNC:32070 HPA:HPA028055 neXtProt:NX_Q96S90
PharmGKB:PA142671493 InParanoid:Q96S90 OMA:RMQQRAV PhylomeDB:Q96S90
EvolutionaryTrace:Q96S90 GenomeRNAi:388695 NextBio:102288
Bgee:Q96S90 CleanEx:HS_LYSMD1 Genevestigator:Q96S90
GermOnline:ENSG00000163155 Uniprot:Q96S90
Length = 227
Score = 94 (38.1 bits), Expect = 0.00072, P = 0.00072
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
GDTL GL+ KYGV+++ IK AN L + D+I+ K L IP
Sbjct: 47 GDTLAGLALKYGVTMEQIKRANRLYTNDSIFLKKTLYIP 85
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.310 0.129 0.368 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 142 131 0.00091 102 3 11 23 0.37 32
29 0.42 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 558 (59 KB)
Total size of DFA: 117 KB (2076 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.89u 0.24s 12.13t Elapsed: 00:00:01
Total cpu time: 11.89u 0.24s 12.13t Elapsed: 00:00:01
Start: Fri May 10 08:26:16 2013 End: Fri May 10 08:26:17 2013