BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040221
(142 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225446672|ref|XP_002281964.1| PREDICTED: probable endopeptidase p60-like [Vitis vinifera]
Length = 133
Score = 140 bits (353), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/126 (57%), Positives = 91/126 (72%), Gaps = 9/126 (7%)
Query: 18 DGSGDGREAAVAKTAGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPP-Q 76
+G G +EAAVAKTAGF VFSGIA+SILKALN N N N + E +QP P +
Sbjct: 16 NGEGHSKEAAVAKTAGFFVFSGIAMSILKALNSCN-NDNNKLLTHSVTEPSQPTDPSHSR 74
Query: 77 QPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+PI ++ E ++ +T++IV+GDTLWGLSRK+GVSIDAIKEANGL+GDTIYAG
Sbjct: 75 EPIF-------KEKEVRESTQKTIDIVKGDTLWGLSRKHGVSIDAIKEANGLTGDTIYAG 127
Query: 137 KKLIIP 142
KKL+IP
Sbjct: 128 KKLVIP 133
>gi|42565395|gb|AAS20972.1| cell wall hydrolase, partial [Hyacinthus orientalis]
Length = 132
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/122 (47%), Positives = 79/122 (64%), Gaps = 3/122 (2%)
Query: 24 REAAVAKTAGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKP 83
+ A VAK AGF+ FSGIA+SI+KAL Q +P + + PP Q +
Sbjct: 11 KHAIVAKAAGFLAFSGIALSIIKALTSKTHQPQPQPQQKPSPSAPPSVPPPNIQSTSKQK 70
Query: 84 SICTEKS---EPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLI 140
+ E++ ++ RT+EI +GDTLWG+SRKYGV+IDAI+EANG++GD I+AGKKLI
Sbjct: 71 QVAAEQAGCGSSSLSASRTIEIAKGDTLWGISRKYGVTIDAIREANGITGDMIFAGKKLI 130
Query: 141 IP 142
IP
Sbjct: 131 IP 132
>gi|116778927|gb|ABK21059.1| unknown [Picea sitchensis]
gi|148908768|gb|ABR17490.1| unknown [Picea sitchensis]
Length = 148
Score = 106 bits (264), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 86/145 (59%), Gaps = 14/145 (9%)
Query: 9 PTPRVPAENDGSGDGREAAVAKTAGFVVFSGIAISILKALNP--------LNKNRNETTQ 60
P+ + ++DG ++A VA +AGFVVF+GIA+S+ KAL P +++ TT
Sbjct: 7 PSGKSGGKDDGK---KDAVVATSAGFVVFTGIALSLFKALWPKKPVEESFISEEAVSTTS 63
Query: 61 PQPIAESTQPIQ---PPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGV 117
+ I E + P + +K + S +T+EI +GDTLWGLSRKYGV
Sbjct: 64 TENIFEDLKEKASEVPKAANGVAYDVGKKFQKGGGKKKSNQTIEIFKGDTLWGLSRKYGV 123
Query: 118 SIDAIKEANGLSGDTIYAGKKLIIP 142
S++AIK ANG S DTIYAG+KLI+P
Sbjct: 124 SVEAIKAANGFSDDTIYAGEKLILP 148
>gi|116791072|gb|ABK25848.1| unknown [Picea sitchensis]
Length = 152
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 86/149 (57%), Gaps = 18/149 (12%)
Query: 9 PTPRVPAENDGSGDGREAAVAKTAGFVVFSGIAISILKALNP--------LNKNRNETTQ 60
P+ + ++DG ++A VA +AGFVVF+GIA+S+ KAL P +++ TT
Sbjct: 7 PSGKSGGKDDGK---KDAVVATSAGFVVFTGIALSLFKALWPKKPVEESFISEEAVSTTS 63
Query: 61 PQPI-------AESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSR 113
+ I AE P + +K + S +T+EI +GDTLWGLSR
Sbjct: 64 TENIFEDLKVDAEEKASEVPKAANGVAYDVGKKFQKGGGKKKSNQTIEIFKGDTLWGLSR 123
Query: 114 KYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
KYGVS++AIK ANG S DTIYAG+KLI+P
Sbjct: 124 KYGVSVEAIKAANGFSDDTIYAGEKLILP 152
>gi|302143455|emb|CBI22016.3| unnamed protein product [Vitis vinifera]
Length = 94
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 71/102 (69%), Gaps = 9/102 (8%)
Query: 42 ISILKALNPLNKNRNETTQPQPIAESTQPIQPPP-QQPIVTKPSICTEKSEPEPASCRTV 100
+SILKALN N N N + E +QP P ++PI ++ E ++ +T+
Sbjct: 1 MSILKALNSCN-NDNNKLLTHSVTEPSQPTDPSHSREPIF-------KEKEVRESTQKTI 52
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+IV+GDTLWGLSRK+GVSIDAIKEANGL+GDTIYAGKKL+IP
Sbjct: 53 DIVKGDTLWGLSRKHGVSIDAIKEANGLTGDTIYAGKKLVIP 94
>gi|116783392|gb|ABK22923.1| unknown [Picea sitchensis]
Length = 150
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 75/134 (55%), Gaps = 18/134 (13%)
Query: 25 EAAVAKTAGFVVFSGIAISILKALNPLNKNRNETTQP-QPIAESTQPIQPPPQ------- 76
+ +A TAG VVF+GI +S+ KA +K E P QP E+ ++ PQ
Sbjct: 19 DTFIATTAGVVVFTGIGLSLFKAFK--SKRLAEEVSPLQPSYEAVGDVRDQPQTEATEKN 76
Query: 77 -------QPIVTKPSIC-TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
+V + +I K + S +T+EI +GD+LW LSRKYGVS+D IK AN
Sbjct: 77 NDVVKEVNDVVKEVNIFGFHKGGNKKRSSQTIEIFKGDSLWSLSRKYGVSVDQIKAANKY 136
Query: 129 SGDTIYAGKKLIIP 142
+ DTIYAG+KLIIP
Sbjct: 137 TDDTIYAGEKLIIP 150
>gi|302758198|ref|XP_002962522.1| hypothetical protein SELMODRAFT_438219 [Selaginella moellendorffii]
gi|300169383|gb|EFJ35985.1| hypothetical protein SELMODRAFT_438219 [Selaginella moellendorffii]
Length = 161
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 10/127 (7%)
Query: 22 DGREAAVAKTAGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQP--- 78
D + +AK AG V+ +GIA ++ K P K +E + + +E + Q+
Sbjct: 37 DKTDYTIAKAAGAVIATGIAWTVFKTFWP--KKADE--EYERYSEGVSSFESEAQEKTEG 92
Query: 79 IVTKPSICTEKSEPEPASCR---TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYA 135
+ + + K P+ + E+ GDTL+GLSRKYGV++++IK ANG+ D I
Sbjct: 93 LADRAASTISKKFPKFSRKHKSGAYEVCPGDTLYGLSRKYGVTVESIKAANGIHNDIIVV 152
Query: 136 GKKLIIP 142
G KL IP
Sbjct: 153 GDKLDIP 159
>gi|302758692|ref|XP_002962769.1| hypothetical protein SELMODRAFT_438100 [Selaginella moellendorffii]
gi|300169630|gb|EFJ36232.1| hypothetical protein SELMODRAFT_438100 [Selaginella moellendorffii]
Length = 161
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
Query: 22 DGREAAVAKTAGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQP--- 78
D + +AK AG V+ +GIA ++ K P + + + +E + Q+
Sbjct: 37 DKTDYTIAKAAGAVIATGIAWTVFKTFWP----KKADEEYERYSEGVSSFESEAQEKTEG 92
Query: 79 IVTKPSICTEKSEPEPASCR---TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYA 135
+ + K P+ + E+ GDTL+GLSRKYGV++++IK ANG+ D I
Sbjct: 93 FADRAASTISKKFPKFSRKHKSGAYEVCPGDTLYGLSRKYGVTVESIKAANGIHNDIIVV 152
Query: 136 GKKLIIP 142
G KL IP
Sbjct: 153 GDKLDIP 159
>gi|313122909|ref|YP_004033168.1| cell wall-associated hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312279472|gb|ADQ60191.1| Cell wall-associated hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 366
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 34/41 (82%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+V+ DTLWGLS+KYGVS+ +K+ANG+SG IY G+KL IP
Sbjct: 34 VVKNDTLWGLSKKYGVSVSDLKKANGVSGHLIYVGQKLQIP 74
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 26/36 (72%)
Query: 104 RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+GDTLW L++KYGVS+ + +AN LS TI G+ L
Sbjct: 95 KGDTLWSLAKKYGVSVSTLMKANNLSSSTILIGQSL 130
>gi|116513351|ref|YP_812257.1| cell wall-associated hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|116092666|gb|ABJ57819.1| Cell wall-associated hydrolase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 379
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
A + +V+ DTLWGLS+KYGVS+ +K+ANG+SG IY G+KL IP
Sbjct: 27 ALADSYTVVKNDTLWGLSKKYGVSVSDLKKANGVSGHLIYVGQKLQIP 74
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GDTLW L++KYGVS+ A+ +AN LS TI G+ L
Sbjct: 105 GDTLWSLAKKYGVSVSALMKANNLSSSTILIGQSL 139
>gi|104773371|ref|YP_618351.1| hypothetical protein Ldb0165 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103422452|emb|CAI97005.1| Hypothetical protein Ldb0165 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 379
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
A + +V+ DTLWGLS+KYGVS+ +K+ANG+SG IY G+KL IP
Sbjct: 27 ALADSYTVVKNDTLWGLSKKYGVSVSDLKKANGVSGHLIYVGQKLQIP 74
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GDTLW L++KYGVS+ A+ +AN LS TI G+ L
Sbjct: 105 GDTLWSLAKKYGVSVSALMKANNLSSSTILIGQSL 139
>gi|385814939|ref|YP_005851330.1| P54 protein precursor [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|325124976|gb|ADY84306.1| P54 protein precursor [Lactobacillus delbrueckii subsp. bulgaricus
2038]
Length = 381
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
A + +V+ DTLWGLS+KYGVS+ +K+ANG+SG IY G+KL IP
Sbjct: 27 ALADSYTVVKNDTLWGLSKKYGVSVSDLKKANGVSGHLIYVGQKLQIP 74
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GDTLW L++KYGVS+ A+ +AN LS TI G+ L
Sbjct: 105 GDTLWSLAKKYGVSVSALMKANNLSSSTILIGQSL 139
>gi|300811465|ref|ZP_07091959.1| LysM domain protein [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497538|gb|EFK32566.1| LysM domain protein [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 381
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ +V+ DTLWGLS+KYGVS+ +K+ANG+SG IY G+KL IP
Sbjct: 31 SYTVVKNDTLWGLSKKYGVSVSDLKKANGVSGHLIYVGQKLQIP 74
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GDTLW L++KYGVS+ + +AN LS TI G+ L
Sbjct: 105 GDTLWSLAKKYGVSVSTLMKANNLSSSTILIGQSL 139
>gi|418030235|ref|ZP_12668749.1| hypothetical protein LDBUL1632_01543 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354688084|gb|EHE88133.1| hypothetical protein LDBUL1632_01543 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 387
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ +V+ DTLWGLS+KYGVS+ +K+ANG+SG IY G+KL IP
Sbjct: 39 SYTVVKNDTLWGLSKKYGVSVSDLKKANGVSGHLIYVGQKLQIP 82
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GDTLW L++KYGVS+ A+ +AN LS TI G+ L
Sbjct: 113 GDTLWSLAKKYGVSVSALMKANNLSSSTILIGQSL 147
>gi|418036407|ref|ZP_12674826.1| hypothetical protein LDBUL1519_01526 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354687720|gb|EHE87790.1| hypothetical protein LDBUL1519_01526 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 387
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ +V+ DTLWGLS+KYGVS+ +K+ANG+SG IY G+KL IP
Sbjct: 39 SYTVVKNDTLWGLSKKYGVSVSDLKKANGVSGHLIYVGQKLQIP 82
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GDTLW L++KYGVS+ A+ +AN LS TI G+ L
Sbjct: 113 GDTLWSLAKKYGVSVSALMKANNLSSSTILIGQSL 147
>gi|256617685|ref|ZP_05474531.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecalis ATCC
4200]
gi|256597212|gb|EEU16388.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecalis ATCC
4200]
Length = 231
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 74 PPQQPIVTK-PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT 132
Q+ IV K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDT
Sbjct: 162 AGQKIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDT 221
Query: 133 IYAGKKL 139
IY G+ L
Sbjct: 222 IYIGQTL 228
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 96 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 155
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+K+I+
Sbjct: 156 KGDLIFAGQKIIVK 169
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%)
Query: 111 LSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 4 IAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 35
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 63 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 103
>gi|257089227|ref|ZP_05583588.1| autolysin [Enterococcus faecalis CH188]
gi|256998039|gb|EEU84559.1| autolysin [Enterococcus faecalis CH188]
Length = 222
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 74 PPQQPIVTK-PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT 132
Q+ IV K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDT
Sbjct: 153 AGQKIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDT 212
Query: 133 IYAGKKL 139
IY G+ L
Sbjct: 213 IYIGQTL 219
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 87 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 146
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+K+I+
Sbjct: 147 KGDLIFAGQKIIVK 160
Score = 35.4 bits (80), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 54 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 94
>gi|424685662|ref|ZP_18122354.1| LysM domain protein, partial [Enterococcus faecalis ERV129]
gi|424701351|ref|ZP_18137525.1| LysM domain protein, partial [Enterococcus faecalis ERV62]
gi|424717992|ref|ZP_18147262.1| LysM domain protein, partial [Enterococcus faecalis ERV68]
gi|424722415|ref|ZP_18151475.1| LysM domain protein, partial [Enterococcus faecalis ERV72]
gi|424760898|ref|ZP_18188486.1| LysM domain protein, partial [Enterococcus faecalis R508]
gi|402358237|gb|EJU92919.1| LysM domain protein, partial [Enterococcus faecalis ERV129]
gi|402371783|gb|EJV05929.1| LysM domain protein, partial [Enterococcus faecalis ERV62]
gi|402383246|gb|EJV16857.1| LysM domain protein, partial [Enterococcus faecalis ERV68]
gi|402388729|gb|EJV22156.1| LysM domain protein, partial [Enterococcus faecalis ERV72]
gi|402402619|gb|EJV35322.1| LysM domain protein, partial [Enterococcus faecalis R508]
Length = 182
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 115 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 174
Query: 135 AGKKL 139
G+ L
Sbjct: 175 IGQTL 179
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 47 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 106
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 107 KGDLIFAGQTIIVK 120
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 90 SEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
S + T ++ GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 1 SNNNQSGTNTYYTIKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 54
>gi|312905043|ref|ZP_07764168.1| LysM domain protein, partial [Enterococcus faecalis TX0635]
gi|310631622|gb|EFQ14905.1| LysM domain protein [Enterococcus faecalis TX0635]
Length = 240
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 74 PPQQPIVTK-PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT 132
Q+ IV K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDT
Sbjct: 171 AGQKIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDT 230
Query: 133 IYAGKKL 139
IY G+ L
Sbjct: 231 IYIGQTL 237
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 4 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 44
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 105 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 164
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+K+I+
Sbjct: 165 KGDLIFAGQKIIVK 178
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 72 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 112
>gi|422844584|ref|ZP_16891294.1| cell wall-associated hydrolase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|325685267|gb|EGD27382.1| cell wall-associated hydrolase [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 383
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ +V+ DTLWGLS+KYGVS+ +K+ANG+SG IY G+KL IP
Sbjct: 39 SYTVVKNDTLWGLSKKYGVSVSDLKKANGVSGHLIYVGQKLQIP 82
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GDTLW L++KYGVS+ + +AN LS TI G+ L
Sbjct: 113 GDTLWSLAKKYGVSVSTLMKANNLSSSTILIGQSL 147
>gi|430358948|ref|ZP_19425636.1| bacterial cell wall hydrolase [Enterococcus faecalis OG1X]
gi|430367424|ref|ZP_19427890.1| bacterial cell wall hydrolase [Enterococcus faecalis M7]
gi|429513506|gb|ELA03086.1| bacterial cell wall hydrolase [Enterococcus faecalis OG1X]
gi|429516663|gb|ELA06144.1| bacterial cell wall hydrolase [Enterococcus faecalis M7]
Length = 163
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 96 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 155
Query: 135 AGKKL 139
G+ L
Sbjct: 156 IGQTL 160
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 28 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 87
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 88 KGDLIFAGQTIIVK 101
>gi|424687017|ref|ZP_18123672.1| LysM domain protein, partial [Enterococcus faecalis ERV25]
gi|424711880|ref|ZP_18144087.1| LysM domain protein, partial [Enterococcus faecalis ERV65]
gi|402366208|gb|EJV00605.1| LysM domain protein, partial [Enterococcus faecalis ERV25]
gi|402382697|gb|EJV16348.1| LysM domain protein, partial [Enterococcus faecalis ERV65]
Length = 181
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 114 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 173
Query: 135 AGKKL 139
G+ L
Sbjct: 174 IGQTL 178
Score = 39.3 bits (90), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 46 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 105
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 106 KGDLIFAGQTIIVK 119
Score = 35.8 bits (81), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 13 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 53
>gi|424681116|ref|ZP_18117910.1| LysM domain protein, partial [Enterococcus faecalis ERV116]
gi|402352057|gb|EJU86920.1| LysM domain protein, partial [Enterococcus faecalis ERV116]
Length = 226
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 159 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 218
Query: 135 AGKKL 139
G+ L
Sbjct: 219 IGQTL 223
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 91 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 150
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 151 KGDLIFAGQTIIVK 164
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 23/29 (79%)
Query: 114 KYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 2 QYGVSVANLRSWNGISGDLIFAGQKIIVK 30
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 58 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 98
>gi|422690522|ref|ZP_16748576.1| LysM domain protein, partial [Enterococcus faecalis TX0630]
gi|315576577|gb|EFU88768.1| LysM domain protein [Enterococcus faecalis TX0630]
Length = 135
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 74 PPQQPIVTK-PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT 132
Q+ IV K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDT
Sbjct: 66 AGQKIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDT 125
Query: 133 IYAGKKL 139
IY G+ L
Sbjct: 126 IYIGQTL 132
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 76 QQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG 130
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+ G
Sbjct: 2 QKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGIKG 61
Query: 131 DTIYAGKKLIIP 142
D I+AG+K+I+
Sbjct: 62 DLIFAGQKIIVK 73
>gi|256964367|ref|ZP_05568538.1| bacterial cell wall hydrolase [Enterococcus faecalis HIP11704]
gi|256954863|gb|EEU71495.1| bacterial cell wall hydrolase [Enterococcus faecalis HIP11704]
Length = 231
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 164 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 223
Query: 135 AGKKL 139
G+ L
Sbjct: 224 IGQTL 228
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 96 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 155
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 156 KGDLIFAGQTIIVK 169
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%)
Query: 111 LSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 4 IAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 35
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 63 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 103
>gi|424678100|ref|ZP_18114944.1| LysM domain protein, partial [Enterococcus faecalis ERV103]
gi|402352526|gb|EJU87375.1| LysM domain protein, partial [Enterococcus faecalis ERV103]
Length = 300
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 233 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 292
Query: 135 AGKKL 139
G+ L
Sbjct: 293 IGQTL 297
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 64 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 104
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 165 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 224
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 225 KGDLIFAGQTIIVK 238
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 24/32 (75%)
Query: 111 LSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 5 IAAQYGVSVANLRSWNGISGDLIFVGQKLIVK 36
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ + + I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 120 NNNQSGTNTYYTIKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 172
>gi|424723606|ref|ZP_18152564.1| LysM domain protein, partial [Enterococcus faecalis ERV73]
gi|402397599|gb|EJV30605.1| LysM domain protein, partial [Enterococcus faecalis ERV73]
Length = 249
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 182 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 241
Query: 135 AGKKL 139
G+ L
Sbjct: 242 IGQTL 246
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ + + I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 1 NNNQSGTNTYYTIKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 53
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 114 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 173
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 174 KGDLIFAGQTIIVK 187
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 81 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 121
>gi|293383509|ref|ZP_06629420.1| N-acetylmuramoyl-L-alanine amidase, family 4, partial [Enterococcus
faecalis R712]
gi|293386665|ref|ZP_06631239.1| N-acetylmuramoyl-L-alanine amidase, family 4, partial [Enterococcus
faecalis S613]
gi|422684754|ref|ZP_16742981.1| LysM domain protein, partial [Enterococcus faecalis TX4000]
gi|291079143|gb|EFE16507.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Enterococcus faecalis
R712]
gi|291083882|gb|EFE20845.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Enterococcus faecalis
S613]
gi|315030501|gb|EFT42433.1| LysM domain protein [Enterococcus faecalis TX4000]
Length = 250
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 183 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 242
Query: 135 AGKKL 139
G+ L
Sbjct: 243 IGQTL 247
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 90 SEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
S + T ++ GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 1 SNNNQSGTNTYYTIKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 54
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 115 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 174
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 175 KGDLIFAGQTIIVK 188
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 82 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 122
>gi|312951829|ref|ZP_07770720.1| LysM domain protein, partial [Enterococcus faecalis TX0102]
gi|310630232|gb|EFQ13515.1| LysM domain protein [Enterococcus faecalis TX0102]
Length = 248
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 181 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 240
Query: 135 AGKKL 139
G+ L
Sbjct: 241 IGQTL 245
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 12 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 52
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 113 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 172
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 173 KGDLIFAGQTIIVK 186
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 80 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 120
>gi|307276218|ref|ZP_07557348.1| LysM domain protein, partial [Enterococcus faecalis TX2134]
gi|307296176|ref|ZP_07576006.1| LysM domain protein, partial [Enterococcus faecalis TX0411]
gi|312907127|ref|ZP_07766120.1| LysM domain protein, partial [Enterococcus faecalis DAPTO 512]
gi|312979294|ref|ZP_07790992.1| LysM domain protein, partial [Enterococcus faecalis DAPTO 516]
gi|306496150|gb|EFM65730.1| LysM domain protein [Enterococcus faecalis TX0411]
gi|306507130|gb|EFM76270.1| LysM domain protein [Enterococcus faecalis TX2134]
gi|310626904|gb|EFQ10187.1| LysM domain protein [Enterococcus faecalis DAPTO 512]
gi|311287888|gb|EFQ66444.1| LysM domain protein [Enterococcus faecalis DAPTO 516]
Length = 248
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 181 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 240
Query: 135 AGKKL 139
G+ L
Sbjct: 241 IGQTL 245
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 12 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 52
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 113 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 172
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 173 KGDLIFAGQTIIVK 186
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 80 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 120
>gi|384517859|ref|YP_005705164.1| 1,4-beta-N-acetylmuramoylhydrolase domain protein [Enterococcus
faecalis 62]
gi|323479992|gb|ADX79431.1| 1,4-beta-N-acetylmuramoylhydrolase domain protein [Enterococcus
faecalis 62]
Length = 222
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 155 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 214
Query: 135 AGKKL 139
G+ L
Sbjct: 215 IGQTL 219
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 87 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 146
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 147 KGDLIFAGQTIIVK 160
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 54 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 94
>gi|422732077|ref|ZP_16788423.1| LysM domain protein, partial [Enterococcus faecalis TX0645]
gi|315161878|gb|EFU05895.1| LysM domain protein [Enterococcus faecalis TX0645]
Length = 237
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 170 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 229
Query: 135 AGKKL 139
G+ L
Sbjct: 230 IGQTL 234
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 1 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 41
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 102 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 161
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 162 KGDLIFAGQTIIVK 175
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 69 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 109
>gi|422721481|ref|ZP_16778070.1| LysM domain protein, partial [Enterococcus faecalis TX0017]
gi|315031307|gb|EFT43239.1| LysM domain protein [Enterococcus faecalis TX0017]
Length = 220
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 153 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 212
Query: 135 AGKKL 139
G+ L
Sbjct: 213 IGQTL 217
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 85 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 144
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 145 KGDLIFAGQTIIVK 158
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 52 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 92
>gi|422691046|ref|ZP_16749086.1| LysM domain protein, partial [Enterococcus faecalis TX0031]
gi|315154256|gb|EFT98272.1| LysM domain protein [Enterococcus faecalis TX0031]
Length = 260
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 193 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 252
Query: 135 AGKKL 139
G+ L
Sbjct: 253 IGQTL 257
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 24 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 64
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 125 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 184
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 185 KGDLIFAGQTIIVK 198
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 92 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 132
>gi|227554916|ref|ZP_03984963.1| possible cell wall lysis protein, partial [Enterococcus faecalis
HH22]
gi|227175942|gb|EEI56914.1| possible cell wall lysis protein [Enterococcus faecalis HH22]
Length = 254
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 187 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 246
Query: 135 AGKKL 139
G+ L
Sbjct: 247 IGQTL 251
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 18 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 58
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 119 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 178
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 179 KGDLIFAGQTIIVK 192
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 86 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 126
>gi|422738927|ref|ZP_16794113.1| LysM domain protein, partial [Enterococcus faecalis TX2141]
gi|315145191|gb|EFT89207.1| LysM domain protein [Enterococcus faecalis TX2141]
Length = 311
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 244 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 303
Query: 135 AGKKL 139
G+ L
Sbjct: 304 IGQTL 308
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 75 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 115
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 10 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIVK 47
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 176 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 235
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 236 KGDLIFAGQTIIVK 249
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 143 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 183
>gi|424733105|ref|ZP_18161674.1| LysM domain protein, partial [Enterococcus faecalis ERV81]
gi|402392417|gb|EJV25679.1| LysM domain protein, partial [Enterococcus faecalis ERV81]
Length = 244
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 177 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 236
Query: 135 AGKKL 139
G+ L
Sbjct: 237 IGQTL 241
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 11 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIVK 48
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 109 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 168
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 169 KGDLIFAGQTIIVK 182
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 76 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 116
>gi|422694224|ref|ZP_16752219.1| LysM domain protein, partial [Enterococcus faecalis TX4244]
gi|422722363|ref|ZP_16778924.1| LysM domain protein, partial [Enterococcus faecalis TX2137]
gi|315027604|gb|EFT39536.1| LysM domain protein [Enterococcus faecalis TX2137]
gi|315148306|gb|EFT92322.1| LysM domain protein [Enterococcus faecalis TX4244]
Length = 216
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 149 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 208
Query: 135 AGKKL 139
G+ L
Sbjct: 209 IGQTL 213
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 81 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 140
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 141 KGDLIFAGQTIIVK 154
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 48 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 88
>gi|307271409|ref|ZP_07552683.1| LysM domain protein, partial [Enterococcus faecalis TX0855]
gi|306511904|gb|EFM80900.1| LysM domain protein [Enterococcus faecalis TX0855]
Length = 237
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 170 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 229
Query: 135 AGKKL 139
G+ L
Sbjct: 230 IGQTL 234
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 1 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 41
Score = 38.5 bits (88), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 102 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 161
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 162 KGDLIFAGQTIIVK 175
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 69 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 109
>gi|424755190|ref|ZP_18183076.1| LysM domain protein, partial [Enterococcus faecalis ERV93]
gi|402401153|gb|EJV33941.1| LysM domain protein, partial [Enterococcus faecalis ERV93]
Length = 301
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 234 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 293
Query: 135 AGKKL 139
G+ L
Sbjct: 294 IGQTL 298
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 65 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 105
Score = 39.7 bits (91), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 106 DTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
DTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 1 DTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIVK 37
Score = 38.5 bits (88), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 166 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 225
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 226 KGDLIFAGQTIIVK 239
Score = 35.4 bits (80), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 133 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 173
>gi|255973877|ref|ZP_05424463.1| bacterial cell wall hydrolase [Enterococcus faecalis T2]
gi|255966749|gb|EET97371.1| bacterial cell wall hydrolase [Enterococcus faecalis T2]
Length = 299
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 232 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 291
Query: 135 AGKKL 139
G+ L
Sbjct: 292 IGQTL 296
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 63 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 103
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 164 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 223
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 224 KGDLIFAGQTIIVK 237
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 24/32 (75%)
Query: 111 LSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 4 IAAQYGVSVANLRSWNGISGDLIFVGQKLIVK 35
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 131 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 171
>gi|424673724|ref|ZP_18110657.1| LysM domain protein, partial [Enterococcus faecalis 599]
gi|402352102|gb|EJU86962.1| LysM domain protein, partial [Enterococcus faecalis 599]
Length = 312
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 245 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 304
Query: 135 AGKKL 139
G+ L
Sbjct: 305 IGQTL 309
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 76 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 116
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 11 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIVK 48
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 177 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 236
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 237 KGDLIFAGQTIIVK 250
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 144 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 184
>gi|307284367|ref|ZP_07564532.1| LysM domain protein, partial [Enterococcus faecalis TX0860]
gi|306503307|gb|EFM72559.1| LysM domain protein [Enterococcus faecalis TX0860]
Length = 346
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 279 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 338
Query: 135 AGKKL 139
G+ L
Sbjct: 339 IGQTL 343
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 110 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 150
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 45 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIVK 82
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 211 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 270
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 271 KGDLIFAGQTIIVK 284
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 178 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 218
>gi|227517770|ref|ZP_03947819.1| possible lysozyme, partial [Enterococcus faecalis TX0104]
gi|227074779|gb|EEI12742.1| possible lysozyme [Enterococcus faecalis TX0104]
Length = 267
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 200 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 259
Query: 135 AGKKL 139
G+ L
Sbjct: 260 IGQTL 264
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 31 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIVK 71
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 74 PPQQPIVTKPSICTEKSEPEP-----ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ IV K + + +P + + I GDTL +S ++GVS+ ++ NG+
Sbjct: 132 AGQKIIVKKGANSGSTNTNKPTNNGGGATTSYTIKSGDTLNKISAQFGVSVANLRSWNGI 191
Query: 129 SGDTIYAGKKLIIP 142
GD I+AG+ +I+
Sbjct: 192 KGDLIFAGQTIIVK 205
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 99 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIVK 139
>gi|422698403|ref|ZP_16756310.1| LysM domain protein, partial [Enterococcus faecalis TX1346]
gi|315173067|gb|EFU17084.1| LysM domain protein [Enterococcus faecalis TX1346]
Length = 139
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 72 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 131
Query: 135 AGKKL 139
G+ L
Sbjct: 132 IGQTL 136
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 37 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIVK 77
>gi|257418402|ref|ZP_05595396.1| hydrolase [Enterococcus faecalis T11]
gi|257160230|gb|EEU90190.1| hydrolase [Enterococcus faecalis T11]
Length = 737
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YGVSI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGVSIQKIKQLNGLSGDTIY 729
Query: 135 AGKKLII 141
G+ L +
Sbjct: 730 IGQTLKV 736
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|168000605|ref|XP_001753006.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695705|gb|EDQ82047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 145
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 24 REAAVAKTAGFVVFSGIAISILKALNPLNKNRN--ETTQPQPIAESTQPIQPPPQQPIVT 81
++ ++AK AG VV SGIA S+ +++ + +N +T + + +
Sbjct: 19 KDESIAKAAGVVVASGIAWSLFRSITSRGEQQNNGDTLSKEVKLNAGDAALGVSSTRGTS 78
Query: 82 KPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLI 140
P+ + A+ +TV++ GDTLWGL+ K+ VS+DA+ NG+ GD+I G +I
Sbjct: 79 DPAGRKISNFGYKAAGKTVQVHDGDTLWGLAMKHNVSVDALIAINGIKDGDSIIVGDTII 138
Query: 141 IP 142
+P
Sbjct: 139 LP 140
>gi|452976081|gb|EME75897.1| cell wall hydrolase LytE [Bacillus sonorensis L12]
Length = 274
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +TV++ +GDTLWG S+KYG +I+ IK+ N L+ DTIY G+ L I
Sbjct: 22 AASAQTVKVKKGDTLWGFSKKYGTTINKIKKENKLTSDTIYIGQTLSI 69
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++VRGD+LW +S+ Y ++++ +K+ NGL D I G+ L
Sbjct: 88 THKVVRGDSLWKISKTYNMTVNELKKLNGLKTDLIRIGQVL 128
>gi|257083718|ref|ZP_05578079.1| bacterial cell wall hydrolase [Enterococcus faecalis Fly1]
gi|256991748|gb|EEU79050.1| bacterial cell wall hydrolase [Enterococcus faecalis Fly1]
Length = 732
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 665 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 724
Query: 135 AGKKLII 141
G+ L +
Sbjct: 725 IGQTLKV 731
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 76 QQPIVTK-PSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
Q+ IV K S T S + T ++ GDTL ++ +YGVS+ ++ NG+SGD I
Sbjct: 468 QKLIVKKGASGNTGGSNNNQSGTNTYYTIKSGDTLNKIAAQYGVSVANLRSWNGISGDLI 527
Query: 134 YAGKKLII 141
+AG+K+I+
Sbjct: 528 FAGQKIIV 535
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 630 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 669
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 564 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 603
>gi|256959927|ref|ZP_05564098.1| bacterial cell wall hydrolase [Enterococcus faecalis Merz96]
gi|256950423|gb|EEU67055.1| bacterial cell wall hydrolase [Enterococcus faecalis Merz96]
Length = 737
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKL 139
G+ L
Sbjct: 730 IGQTL 734
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|300860015|ref|ZP_07106103.1| putative Muramidase-2 [Enterococcus faecalis TUSoD Ef11]
gi|428766320|ref|YP_007152431.1| autolysin [Enterococcus faecalis str. Symbioflor 1]
gi|300850833|gb|EFK78582.1| putative Muramidase-2 [Enterococcus faecalis TUSoD Ef11]
gi|427184493|emb|CCO71717.1| autolysin [Enterococcus faecalis str. Symbioflor 1]
Length = 737
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKLII 141
G+ L +
Sbjct: 730 IGQTLKV 736
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|255971257|ref|ZP_05421843.1| bacterial cell wall hydrolase [Enterococcus faecalis T1]
gi|255962275|gb|EET94751.1| bacterial cell wall hydrolase [Enterococcus faecalis T1]
Length = 737
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKLII 141
G+ L +
Sbjct: 730 IGQTLKV 736
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|422700683|ref|ZP_16758526.1| putative autolysin [Enterococcus faecalis TX1342]
gi|315170868|gb|EFU14885.1| putative autolysin [Enterococcus faecalis TX1342]
Length = 737
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKLII 141
G+ L +
Sbjct: 730 IGQTLKV 736
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|422736242|ref|ZP_16792506.1| putative autolysin [Enterococcus faecalis TX1341]
gi|315166993|gb|EFU11010.1| putative autolysin [Enterococcus faecalis TX1341]
Length = 733
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 666 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 725
Query: 135 AGKKL 139
G+ L
Sbjct: 726 IGQTL 730
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 497 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 536
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 346 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 400
Score = 43.1 bits (100), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 432 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 468
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 631 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 670
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 565 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 604
>gi|29375389|ref|NP_814543.1| autolysin [Enterococcus faecalis V583]
gi|30179816|sp|P37710.2|ALYS_ENTFA RecName: Full=Autolysin; AltName: Full=Beta-glycosidase; AltName:
Full=Peptidoglycan hydrolase; Flags: Precursor
gi|29342849|gb|AAO80613.1| autolysin [Enterococcus faecalis V583]
Length = 737
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKLII 141
G+ L +
Sbjct: 730 IGQTLKV 736
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|257421051|ref|ZP_05598041.1| autolysin [Enterococcus faecalis X98]
gi|257162875|gb|EEU92835.1| autolysin [Enterococcus faecalis X98]
Length = 732
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 665 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 724
Query: 135 AGKKL 139
G+ L
Sbjct: 725 IGQTL 729
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 496 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 535
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 345 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 399
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 431 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 467
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 630 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 669
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 564 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 603
>gi|422713739|ref|ZP_16770488.1| putative autolysin [Enterococcus faecalis TX0309A]
gi|315581339|gb|EFU93530.1| putative autolysin [Enterococcus faecalis TX0309A]
Length = 737
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKL 139
G+ L
Sbjct: 730 IGQTL 734
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|256957335|ref|ZP_05561506.1| bacterial cell wall hydrolase [Enterococcus faecalis DS5]
gi|257077669|ref|ZP_05572030.1| bacterial cell wall hydrolase [Enterococcus faecalis JH1]
gi|256947831|gb|EEU64463.1| bacterial cell wall hydrolase [Enterococcus faecalis DS5]
gi|256985699|gb|EEU73001.1| bacterial cell wall hydrolase [Enterococcus faecalis JH1]
Length = 737
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKLII 141
G+ L +
Sbjct: 730 IGQTLKV 736
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +Y VS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYDVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|229546655|ref|ZP_04435380.1| autolysin [Enterococcus faecalis TX1322]
gi|256854339|ref|ZP_05559703.1| autolysin [Enterococcus faecalis T8]
gi|257086154|ref|ZP_05580515.1| bacterial cell wall hydrolase [Enterococcus faecalis D6]
gi|229308222|gb|EEN74209.1| autolysin [Enterococcus faecalis TX1322]
gi|256709899|gb|EEU24943.1| autolysin [Enterococcus faecalis T8]
gi|256994184|gb|EEU81486.1| bacterial cell wall hydrolase [Enterococcus faecalis D6]
Length = 737
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKL 139
G+ L
Sbjct: 730 IGQTL 734
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|422727881|ref|ZP_16784302.1| putative autolysin [Enterococcus faecalis TX0012]
gi|315151631|gb|EFT95647.1| putative autolysin [Enterococcus faecalis TX0012]
Length = 737
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKL 139
G+ L
Sbjct: 730 IGQTL 734
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|229548741|ref|ZP_04437466.1| autolysin [Enterococcus faecalis ATCC 29200]
gi|384512497|ref|YP_005707590.1| cell wall lysis protein [Enterococcus faecalis OG1RF]
gi|422707880|ref|ZP_16765417.1| putative autolysin [Enterococcus faecalis TX0043]
gi|229306134|gb|EEN72130.1| autolysin [Enterococcus faecalis ATCC 29200]
gi|315154871|gb|EFT98887.1| putative autolysin [Enterococcus faecalis TX0043]
gi|327534386|gb|AEA93220.1| cell wall lysis protein [Enterococcus faecalis OG1RF]
Length = 737
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKL 139
G+ L
Sbjct: 730 IGQTL 734
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|424746217|ref|ZP_18174466.1| putative gametolysin [Enterococcus faecalis ERV85]
gi|402397585|gb|EJV30593.1| putative gametolysin [Enterococcus faecalis ERV85]
Length = 737
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKL 139
G+ L
Sbjct: 730 IGQTL 734
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 472
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 540
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|424689676|ref|ZP_18126240.1| putative gametolysin [Enterococcus faecalis ERV31]
gi|424693539|ref|ZP_18129969.1| putative gametolysin [Enterococcus faecalis ERV37]
gi|424698252|ref|ZP_18134550.1| putative gametolysin [Enterococcus faecalis ERV41]
gi|424702764|ref|ZP_18138908.1| putative gametolysin [Enterococcus faecalis ERV63]
gi|402367125|gb|EJV01474.1| putative gametolysin [Enterococcus faecalis ERV31]
gi|402373014|gb|EJV07106.1| putative gametolysin [Enterococcus faecalis ERV41]
gi|402373973|gb|EJV08020.1| putative gametolysin [Enterococcus faecalis ERV37]
gi|402386196|gb|EJV19703.1| putative gametolysin [Enterococcus faecalis ERV63]
Length = 737
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKL 139
G+ L
Sbjct: 730 IGQTL 734
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|397699189|ref|YP_006536977.1| autolysin [Enterococcus faecalis D32]
gi|397335828|gb|AFO43500.1| autolysin [Enterococcus faecalis D32]
Length = 737
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKL 139
G+ L
Sbjct: 730 IGQTL 734
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|422718345|ref|ZP_16775008.1| putative autolysin [Enterococcus faecalis TX0309B]
gi|315573421|gb|EFU85612.1| putative autolysin [Enterococcus faecalis TX0309B]
Length = 669
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 602 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 661
Query: 135 AGKKLII 141
G+ L +
Sbjct: 662 IGQTLKV 668
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 433 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 472
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 567 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 606
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 501 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 540
>gi|307270141|ref|ZP_07551458.1| putative autolysin [Enterococcus faecalis TX4248]
gi|306513510|gb|EFM82125.1| putative autolysin [Enterococcus faecalis TX4248]
Length = 737
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKLII 141
G+ L +
Sbjct: 730 IGQTLKV 736
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +Y VS+ ++ NG+SGD I+AG+K+I+
Sbjct: 504 GDTLNKIAAQYDVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +Y VS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYDVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +Y VS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYDVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|256761562|ref|ZP_05502142.1| bacterial cell wall hydrolase [Enterococcus faecalis T3]
gi|256682813|gb|EEU22508.1| bacterial cell wall hydrolase [Enterococcus faecalis T3]
Length = 737
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKLII 141
G+ L +
Sbjct: 730 IGQTLKV 736
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|422703885|ref|ZP_16761701.1| putative autolysin [Enterococcus faecalis TX1302]
gi|315164609|gb|EFU08626.1| putative autolysin [Enterococcus faecalis TX1302]
Length = 669
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 602 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 661
Query: 135 AGKKLII 141
G+ L +
Sbjct: 662 IGQTLKV 668
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 433 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 472
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 567 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 606
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 501 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 540
>gi|257081057|ref|ZP_05575418.1| bacterial cell wall hydrolase [Enterococcus faecalis E1Sol]
gi|256989087|gb|EEU76389.1| bacterial cell wall hydrolase [Enterococcus faecalis E1Sol]
Length = 737
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 670 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 729
Query: 135 AGKKL 139
G+ L
Sbjct: 730 IGQTL 734
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 635 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 674
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 608
>gi|421512886|ref|ZP_15959678.1| N-acetylmuramoyl-L-alanine amidase family 4 [Enterococcus faecalis
ATCC 29212]
gi|422725093|ref|ZP_16781562.1| putative autolysin [Enterococcus faecalis TX0312]
gi|315159955|gb|EFU03972.1| putative autolysin [Enterococcus faecalis TX0312]
gi|401674007|gb|EJS80373.1| N-acetylmuramoyl-L-alanine amidase family 4 [Enterococcus faecalis
ATCC 29212]
Length = 669
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 602 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 661
Query: 135 AGKKLII 141
G+ L +
Sbjct: 662 IGQTLKV 668
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 433 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 472
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 567 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 606
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 501 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 540
>gi|307289504|ref|ZP_07569450.1| putative autolysin [Enterococcus faecalis TX0109]
gi|306499522|gb|EFM68893.1| putative autolysin [Enterococcus faecalis TX0109]
Length = 669
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 602 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 661
Query: 135 AGKKLII 141
G+ L +
Sbjct: 662 IGQTLKV 668
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 433 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 472
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 567 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 606
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 501 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 540
>gi|422710578|ref|ZP_16767623.1| putative autolysin [Enterococcus faecalis TX0027]
gi|315035311|gb|EFT47243.1| putative autolysin [Enterococcus faecalis TX0027]
Length = 669
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 602 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 661
Query: 135 AGKKLII 141
G+ L +
Sbjct: 662 IGQTLKV 668
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 433 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 472
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 567 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 606
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 501 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 540
>gi|294779826|ref|ZP_06745212.1| putative autolysin [Enterococcus faecalis PC1.1]
gi|294453100|gb|EFG21516.1| putative autolysin [Enterococcus faecalis PC1.1]
Length = 669
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 602 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 661
Query: 135 AGKKLII 141
G+ L +
Sbjct: 662 IGQTLKV 668
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 433 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 472
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 567 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 606
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 501 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 540
>gi|409350952|ref|ZP_11233878.1| Cell wall-associated hydrolase [Lactobacillus equicursoris CIP
110162]
gi|407877067|emb|CCK85936.1| Cell wall-associated hydrolase [Lactobacillus equicursoris CIP
110162]
Length = 314
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 35/42 (83%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++V+ D+LW +S+KYGVSI ++K+AN LSG+TIY G+ L IP
Sbjct: 33 KVVKNDSLWAISKKYGVSISSLKKANSLSGNTIYVGQTLKIP 74
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G++IS LK N L+ N Q I S++ +K + K+ S
Sbjct: 48 GVSISSLKKANSLSGNTIYVGQTLKIPSSSKTTSFKSTTKTSSKTAAVKAKAT----SST 103
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++ +GDTLW +++KYGVS+ A+++AN LS IY G+ L
Sbjct: 104 TYKVAKGDTLWSIAKKYGVSVSALQKANNLSSSLIYIGQSL 144
>gi|365156866|ref|ZP_09353157.1| hypothetical protein HMPREF1015_02058 [Bacillus smithii 7_3_47FAA]
gi|363626666|gb|EHL77647.1| hypothetical protein HMPREF1015_02058 [Bacillus smithii 7_3_47FAA]
Length = 341
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+T +V+GDTL ++ KYG S+ AIK AN LS DTIY G+KLIIP
Sbjct: 162 KTYTVVKGDTLTKIASKYGTSVSAIKSANHLSSDTIYVGQKLIIP 206
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 88 EKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KSE A+ ++ GDTL+ +S+KY +ID+IK N LS +TIY + L I
Sbjct: 20 SKSE---AAIINYQVRSGDTLYSISKKYNTTIDSIKNLNHLSTNTIYVSQVLKI 70
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GDTL ++R YG ++ +K NGLS DTIY G+ L
Sbjct: 99 GDTLSQIARAYGTTVQNLKSWNGLSSDTIYPGQVL 133
>gi|829194|gb|AAA67325.1| bacterial cell wall hydrolase [Enterococcus faecalis]
Length = 671
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 604 QTIIVKKGASAGGNASSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 663
Query: 135 AGKKL 139
G+ L
Sbjct: 664 IGQTL 668
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 501 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 368 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGV++ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVTVANLRSWNGISGDLIFVGQKLIV 472
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 569 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 608
>gi|312901662|ref|ZP_07760932.1| putative autolysin [Enterococcus faecalis TX0470]
gi|311291273|gb|EFQ69829.1| putative autolysin [Enterococcus faecalis TX0470]
Length = 669
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 77 QPIVTK--PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
Q I+ K S S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY
Sbjct: 602 QTIIVKKGASAGGNASSTNSASGKRHTVKGGDSLWGLSMQYGISIQKIKQLNGLSGDTIY 661
Query: 135 AGKKLII 141
G+ L +
Sbjct: 662 IGQTLKV 668
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 433 IKSGDTLNKIAAQYGVSVSNLRSWNGISGDLIFAGQKIIV 472
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S + + + GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 350 TGGSNNQSGTNTYYTVKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 567 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 606
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 501 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 540
>gi|408411629|ref|ZP_11182768.1| Cell wall-associated hydrolase [Lactobacillus sp. 66c]
gi|407874202|emb|CCK84574.1| Cell wall-associated hydrolase [Lactobacillus sp. 66c]
Length = 316
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 37/48 (77%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
A + ++V+ D+LW +S+KYGVSI ++++AN LSG+TIY G+ L IP
Sbjct: 27 ALAASYKVVKNDSLWAISKKYGVSISSLQKANSLSGNTIYVGQTLKIP 74
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G++IS L+ N L+ N Q I S++ T K+ S
Sbjct: 48 GVSISSLQKANSLSGNTIYVGQTLKIPSSSKTTSLKSTAKTSTGSKTAAVKATAT--SST 105
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++ +GDTLW +++KYGVS+ A+++AN LS TIY G+ L
Sbjct: 106 TYKVAKGDTLWSIAKKYGVSVSALQKANNLSSSTIYIGQSL 146
>gi|328956890|ref|YP_004374276.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase [Carnobacterium
sp. 17-4]
gi|328673214|gb|AEB29260.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase [Carnobacterium
sp. 17-4]
Length = 1255
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 16/103 (15%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G++IS LK+ N L ST I Q +V K + +P +
Sbjct: 1168 GVSISNLKSWNNL---------------STDAI-SIGQTLVVNKGAASNSAVITKPTTSG 1211
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++V GDTLW +++KYG+SI +K AN L D I+ G+ LII
Sbjct: 1212 THKVVSGDTLWDIAQKYGMSISDLKTANYLKSDVIFVGQSLII 1254
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 15/103 (14%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G+++S LK+ N L + Q I + P P + S
Sbjct: 794 GVSVSNLKSWNNLKSDTIYVNQTLTIKSGSTTPAPSPSTGNTSNTSYT------------ 841
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GDTL G+S K+GV++ +K N L DTIY + L I
Sbjct: 842 ---VKSGDTLTGISSKHGVTVSNLKSWNNLKTDTIYVNQALTI 881
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S + ++ GDTL ++ KYGVS+ +K N L DTIY + L
Sbjct: 573 SSTSYKVKSGDTLTAIASKYGVSVSNLKSWNNLKSDTIYVNQTL 616
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S + ++ GDTL +S +YGVS+ +K N L DTIY + L I
Sbjct: 640 SNTSYKVKSGDTLTRISSQYGVSVSNLKSWNNLKSDTIYVNQTLTI 685
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S + ++ GDTL +S +YGVS+ +K N L DTIY + L I
Sbjct: 707 SNTSYKVKSGDTLTRISSQYGVSVSNLKSWNNLKSDTIYVNQTLTI 752
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S + ++ GDTL +S +YGVS+ +K N L DTIY + L I
Sbjct: 774 SNTSYKVKSGDTLTRISSQYGVSVSNLKSWNNLKSDTIYVNQTLTI 819
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 40/103 (38%), Gaps = 15/103 (14%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G+ +S LK+ N L + Q I P P + S
Sbjct: 856 GVTVSNLKSWNNLKTDTIYVNQALTIKGGNTTTTPAPSTGNTSNTSYT------------ 903
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GDTL G+S K+GV++ +K N L D IY + L I
Sbjct: 904 ---VKSGDTLTGISSKHGVTVANLKSWNNLKTDAIYVNQALTI 943
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 92 PEPASCRT----VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P P++ T + GDTL G+S K+GV++ +K N L D IY + L I
Sbjct: 1078 PSPSTGNTSNTSYTVKSGDTLTGISSKHGVTVANLKSWNNLKTDAIYVNQALTI 1131
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S + + GDTL G+S K+GV++ +K N L D IY + L I
Sbjct: 960 SNTSYTVKSGDTLTGISSKHGVTVANLKSWNNLKTDAIYVNQALTI 1005
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S + + GDTL G+S K+GV++ +K N L D IY + L I
Sbjct: 1022 SNTSYTVKSGDTLTGISSKHGVTVANLKSWNNLKTDAIYVNQALTI 1067
>gi|269926960|ref|YP_003323583.1| Peptidoglycan-binding LysM [Thermobaculum terrenum ATCC BAA-798]
gi|269790620|gb|ACZ42761.1| Peptidoglycan-binding LysM [Thermobaculum terrenum ATCC BAA-798]
Length = 414
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 68 TQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANG 127
TQP + P + P + T K E R +V GDTLWG+SRK+G+++D + ANG
Sbjct: 85 TQPTREPTRNPNRSPRPTATPK---EKNRARYYVVVAGDTLWGISRKFGITVDDLARANG 141
Query: 128 LSGD-TIYAGKKLIIP 142
LS + T+ G++LIIP
Sbjct: 142 LSVNATLQVGQRLIIP 157
>gi|332687125|ref|YP_004456899.1| N-acetylmuramoyl-L-alanine amidase [Melissococcus plutonius ATCC
35311]
gi|332371134|dbj|BAK22090.1| N-acetylmuramoyl-L-alanine amidase family 4, needed for cell
separation and autolysis [Melissococcus plutonius ATCC
35311]
Length = 562
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+V GD+LW LS KYG SI IK N LSGDTIY G++L++
Sbjct: 382 VVAGDSLWALSMKYGTSIATIKSWNHLSGDTIYIGQRLLV 421
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+S +T +V GD+LWG++ KYG S+ +K+ N L+GD IY G+ L +
Sbjct: 515 SSNKTYTVVSGDSLWGIAMKYGTSVQRLKQLNNLTGDIIYIGQVLKV 561
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW ++ +YG+S+ +++ N + GD IY G++LI+
Sbjct: 462 GDSLWAIANRYGISVANLRQWNAIQGDLIYPGQRLIV 498
>gi|257415368|ref|ZP_05592362.1| LOW QUALITY PROTEIN: bacterial cell wall hydrolase, partial
[Enterococcus faecalis ARO1/DG]
gi|257157196|gb|EEU87156.1| LOW QUALITY PROTEIN: bacterial cell wall hydrolase [Enterococcus
faecalis ARO1/DG]
Length = 469
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 34/50 (68%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S AS + + GD+LWGLS +YG+SI IK+ NGLSGDTIY G+ L
Sbjct: 417 SSTNSASGKRHTVKSGDSLWGLSMQYGISIQKIKQLNGLSGDTIYIGQTL 466
Score = 43.5 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 233 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 272
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 100 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 136
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 168 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 204
Score = 39.3 bits (90), Expect = 0.47, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ NG+ GD I+AG+ +I+
Sbjct: 367 IKSGDTLNKISAQFGVSVANLRSWNGIKGDLIFAGQTIIV 406
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +S ++GVS+ ++ N +SG I+AG+K+I+
Sbjct: 301 IKSGDTLNKISAQFGVSVANLQAWNNISGSLIFAGQKIIV 340
>gi|379726978|ref|YP_005319163.1| N-acetylmuramoyl-L-alanine amidase [Melissococcus plutonius DAT561]
gi|376317881|dbj|BAL61668.1| N-acetylmuramoyl-L-alanine amidase [Melissococcus plutonius DAT561]
Length = 627
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+V GD+LW LS KYG SI IK N LSGDTIY G++L++
Sbjct: 382 VVAGDSLWALSMKYGTSIATIKSWNHLSGDTIYIGQRLLV 421
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 74 PPQQPIVTKPSICTEKS--EPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGD 131
P Q+ IV K + + +S +T +V GD+LWG++ KYG S+ +K+ N L+GD
Sbjct: 557 PGQRLIVKKGNSAGSNAGNSGNHSSNKTYTVVSGDSLWGIAMKYGTSVQRLKQLNNLTGD 616
Query: 132 TIYAGKKLII 141
IY G+ L +
Sbjct: 617 IIYIGQVLKV 626
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW ++ KYG+S+ +++ N + GD IY G++LI+
Sbjct: 458 GDSLWAIANKYGISVANLRQWNAIQGDLIYPGQRLIV 494
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 96 SCRTVEIVRG-DTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ T VRG D+LW ++ +YG+S+ +++ N + GD IY G++LI+
Sbjct: 517 AATTYYTVRGGDSLWAIANRYGISVANLRQWNAIQGDLIYPGQRLIV 563
>gi|345023170|ref|ZP_08786783.1| LytF [Ornithinibacillus scapharcae TW25]
Length = 577
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++V GD+LWG+S+KYGVS+DAI+ +N L D + G+ L+IP
Sbjct: 274 QVVAGDSLWGISQKYGVSVDAIRSSNNLDSDNLRVGQLLVIP 315
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 37/58 (63%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ T+K+E + T + GD+LW ++ ++G S+ A+K +N LS DT+ G+KL IP
Sbjct: 200 VVTDKTEVNQS---TYTVSAGDSLWSIANRFGTSVHALKTSNNLSSDTLSVGQKLSIP 254
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 64 IAESTQP-IQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAI 122
IA S Q + Q + +I T + P + +VE +GD+L+ L++KYG ++DAI
Sbjct: 116 IARSNQTTVNDIKQANHLITDAITTNQRLIIPKTFHSVE--KGDSLYSLAQKYGTTVDAI 173
Query: 123 KEANGLSGDTIYAGKKLIIP 142
AN L + G+ LIIP
Sbjct: 174 TSANDLRTFVVNIGQVLIIP 193
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 31/41 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+V+GDTL+ ++ ++ V++D+IK N L+ ++++ G+ + IP
Sbjct: 339 VVKGDTLYSIANRHHVTVDSIKSVNQLASNSLFIGQVIKIP 379
Score = 38.9 bits (89), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTLW ++R +++ IK+AN L D I ++LIIP
Sbjct: 110 GDTLWSIARSNQTTVNDIKQANHLITDAITTNQRLIIP 147
>gi|422867173|ref|ZP_16913774.1| LysM domain protein, partial [Enterococcus faecalis TX1467]
gi|329577673|gb|EGG59102.1| LysM domain protein [Enterococcus faecalis TX1467]
Length = 39
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/35 (68%), Positives = 29/35 (82%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LWGLS +YG+SI IK+ NGLSGDTIY G+ L
Sbjct: 2 GDSLWGLSMQYGISIQKIKQLNGLSGDTIYIGQTL 36
>gi|228916393|ref|ZP_04079962.1| Cell wall hydrolase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
gi|228843303|gb|EEM88382.1| Cell wall hydrolase [Bacillus thuringiensis serovar pulsiensis BGSC
4CC1]
Length = 265
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D I+ G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVQ--KNDTLWGISKQYGVSIQSIKQANHKGNDQIFIGEQLHIP 74
>gi|422423423|ref|ZP_16500376.1| probable N-acetylmuramidase, partial [Listeria seeligeri FSL
S4-171]
gi|313636004|gb|EFS01922.1| probable N-acetylmuramidase [Listeria seeligeri FSL S4-171]
Length = 56
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T S+P ++ +T + +GD+LW +SR+Y ++D IK N L+ +TIY G+KL I
Sbjct: 1 TSTSKPSNSATKTHTVKKGDSLWSVSRQYNTTVDNIKSWNKLTSNTIYIGQKLTIK 56
>gi|385264056|ref|ZP_10042143.1| NlpC/P60 family protein [Bacillus sp. 5B6]
gi|385148552|gb|EIF12489.1| NlpC/P60 family protein [Bacillus sp. 5B6]
Length = 274
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
Q VT + AS +T+++ +GDTLWGLS +YG SI++IK N L D I
Sbjct: 2 KKQLVTVTTAVVLGTTLFAGAASAQTIKVKKGDTLWGLSNRYGTSINSIKSENKLKSDII 61
Query: 134 YAGKKLII 141
Y G+ L I
Sbjct: 62 YIGQTLSI 69
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++V+GD+LW ++ KY ++++ +K NGL D I G+ L
Sbjct: 87 TYKVVKGDSLWKIANKYKMTVNQLKSLNGLKTDLIRIGQVL 127
>gi|311067426|ref|YP_003972349.1| hypothetical protein BATR1942_02310 [Bacillus atrophaeus 1942]
gi|419822589|ref|ZP_14346168.1| hypothetical protein UY9_14326 [Bacillus atrophaeus C89]
gi|310867943|gb|ADP31418.1| hypothetical protein BATR1942_02310 [Bacillus atrophaeus 1942]
gi|388473303|gb|EIM10047.1| hypothetical protein UY9_14326 [Bacillus atrophaeus C89]
Length = 277
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS ++V++ +GDTLWGLS+KYG SI++IK N L D IY G+ L
Sbjct: 22 AASAQSVKVKKGDTLWGLSKKYGTSINSIKSENKLKSDIIYIGQTL 67
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
++V GD+LW +S+KY ++I+ +K+ NGL D I G+ L
Sbjct: 89 KVVSGDSLWKISKKYSMTINELKKLNGLKTDLIRVGQVL 127
>gi|116874055|ref|YP_850836.1| autolysin [Listeria welshimeri serovar 6b str. SLCC5334]
gi|83318884|emb|CAJ01786.1| murA protein [Listeria welshimeri]
gi|116742933|emb|CAK22057.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 587
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S+P +S +T + +GD+LW +SR+Y ++D IK N L+ +TIY G+K+ I
Sbjct: 535 SKPSNSSTKTYTVKKGDSLWSISRQYKTTVDNIKSWNKLTSNTIYIGQKITI 586
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T +V+GD+LW ++ KY VS+ +K N L D IY G+KL +
Sbjct: 331 TYTVVKGDSLWKIATKYNVSVANLKSWNNLKSDNIYIGQKLKV 373
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 82 KPSICTEKSEPEP-ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLI 140
KPS + + +P + +T + +GD+LW ++ + ++ +K N L D IY G+KL
Sbjct: 458 KPSTGSSTNTSKPNTNAKTYTVKKGDSLWKIANQNKTTVTNLKSWNNLKSDNIYIGQKLK 517
Query: 141 I 141
+
Sbjct: 518 V 518
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 87 TEKSEPEPAS-CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T S+P ++ +T + +GD+LW ++ V+I +K N L D IY G+ L +
Sbjct: 390 TNTSKPSTSTNAKTYTVKKGDSLWKIATNNKVTIANLKSWNNLKSDFIYPGQTLKV 445
>gi|375090239|ref|ZP_09736556.1| hypothetical protein HMPREF9708_00946 [Facklamia languida CCUG
37842]
gi|374565777|gb|EHR37039.1| hypothetical protein HMPREF9708_00946 [Facklamia languida CCUG
37842]
Length = 750
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPI-----QPPPQQPIVTKPSICTEKSEPEP 94
I + LK+ N LN + Q +A +T P +P Q T+PS S P P
Sbjct: 383 ITVGQLKSWNGLNSDFIYPGQVLKVAPTTAPAPAGQAEPGQDQTESTRPSRDQSPSVPTP 442
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ +T + GD+LW ++ K+G ++D IK NGL+ + IYAG++L +
Sbjct: 443 -TVQTYRVKAGDSLWAIANKHGATLDQIKTWNGLTSNFIYAGQQLRV 488
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 11/111 (9%)
Query: 37 FSGIAISILKALNPLNKNRNETTQPQPIA--ESTQPIQPPPQ----QPIVTKPSICTEKS 90
GI I +KA N L N Q + +++QP P P QP T+PS S
Sbjct: 138 LHGIRIDQVKAWNGLTSNFIYPGQVLRVTPQQASQPANPTPAPSTPQPAPTQPS---RPS 194
Query: 91 EPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+P P + V+ GD L ++ K+ ++I +K NGL+ D IY G+ L +
Sbjct: 195 QPNPVTNYRVQA--GDYLNRIAGKFNITIGQLKAWNGLTSDFIYPGQVLRV 243
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 29/42 (69%)
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ G+ L+G++ K+G+++D +K NGL+ + IY G+ L +
Sbjct: 41 YQVQAGEGLYGIAVKHGMTLDQLKRLNGLTSNFIYPGQTLKV 82
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 59 TQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVS 118
T P P A QP P QP +P+ E S P T + GD L ++ K+ ++
Sbjct: 332 TTPSPQAPRPANPQPAPSQP--AQPTPPAESSRPS-----TYRVQAGDYLKRIAGKFNIT 384
Query: 119 IDAIKEANGLSGDTIYAGKKLII 141
+ +K NGL+ D IY G+ L +
Sbjct: 385 VGQLKSWNGLNSDFIYPGQVLKV 407
>gi|332798360|ref|YP_004459859.1| cell wall hydrolase SleB [Tepidanaerobacter acetatoxydans Re1]
gi|438001300|ref|YP_007271043.1| Spore cortex-lytic enzyme, lytic transglycosylase SleB
[Tepidanaerobacter acetatoxydans Re1]
gi|332696095|gb|AEE90552.1| cell wall hydrolase SleB [Tepidanaerobacter acetatoxydans Re1]
gi|432178094|emb|CCP25067.1| Spore cortex-lytic enzyme, lytic transglycosylase SleB
[Tepidanaerobacter acetatoxydans Re1]
Length = 323
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 52/104 (50%), Gaps = 27/104 (25%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
GI +S LKALN LN ++ I P I P+ + +
Sbjct: 91 GIDVSELKALNNLN---------------SEVIWPGQALYI------------PQRSLYQ 123
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ + +GDTL+ +S+ YGVSID +K NGL G+ IY G KL+IP
Sbjct: 124 QITVKKGDTLYLISKNYGVSIDDLKVINGLWGNEIYVGMKLLIP 167
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
A + + + GDTL+ LS+ GV ID IK+ N L D++ AG+ L+IP
Sbjct: 25 AEAKVITVQAGDTLYSLSKITGVPIDKIKQCNNLYSDSVTAGQALLIP 72
>gi|154685402|ref|YP_001420563.1| hypothetical protein RBAM_009680 [Bacillus amyloliquefaciens FZB42]
gi|154351253|gb|ABS73332.1| LytE [Bacillus amyloliquefaciens FZB42]
Length = 274
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +T+++ +GDTLWGLS +YG SI++IK N L D IY G+ L I
Sbjct: 22 AASAQTIKVKKGDTLWGLSNRYGTSINSIKSENKLKSDIIYIGQTLSI 69
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++V+GD+LW ++ KY ++++ +K NGL D I G+ L
Sbjct: 87 TYKVVKGDSLWKIANKYKMTVNQLKSLNGLKTDLIRIGQVL 127
>gi|452854911|ref|YP_007496594.1| cell wall hydrolase; phosphatase-associated protein (major
autolysin) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|452079171|emb|CCP20924.1| cell wall hydrolase; phosphatase-associated protein (major
autolysin) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 274
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +T+++ +GDTLWGLS +YG SI++IK N L D IY G+ L I
Sbjct: 22 AASAQTIKVKKGDTLWGLSNRYGTSINSIKSENKLKSDIIYIGQTLSI 69
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++V+GD+LW ++ KY ++++ +K NGL D I G+ L
Sbjct: 87 TYKVVKGDSLWKIANKYKMTVNQLKSLNGLKTDLIRIGQVL 127
>gi|394993297|ref|ZP_10386057.1| hypothetical protein BB65665_12567 [Bacillus sp. 916]
gi|393805869|gb|EJD67228.1| hypothetical protein BB65665_12567 [Bacillus sp. 916]
Length = 274
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +T+++ +GDTLWGLS +YG SI++IK N L D IY G+ L I
Sbjct: 22 AASAQTIKVKKGDTLWGLSNRYGTSINSIKSENKLKSDIIYIGQTLSI 69
Score = 39.3 bits (90), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++V+GD+LW ++ KY ++++ +K NGL D I G+ L
Sbjct: 87 TYKVVKGDSLWKIANKYKMTVNQLKSLNGLKTDLIRIGQVL 127
>gi|222151224|ref|YP_002560378.1| hypothetical protein MCCL_0975 [Macrococcus caseolyticus JCSC5402]
gi|222120347|dbj|BAH17682.1| hypothetical protein MCCL_0975 [Macrococcus caseolyticus JCSC5402]
Length = 1070
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 34/52 (65%)
Query: 91 EPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ +P RT I GDTL G++ KY S+ AIK+ NGL D IYAG+KL IP
Sbjct: 905 KAKPKKTRTHNIKWGDTLGGIAAKYHTSVSAIKKLNGLKSDMIYAGRKLKIP 956
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGK 137
T ++ GDTLW +SRK G ++ A++ NG+ IY G+
Sbjct: 460 THKVKWGDTLWDISRKNGTTVKALQLLNGIKNHLIYPGQ 498
>gi|375361618|ref|YP_005129657.1| protein YojL [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|421732382|ref|ZP_16171505.1| YojL [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|451347744|ref|YP_007446375.1| protein YojL [Bacillus amyloliquefaciens IT-45]
gi|371567612|emb|CCF04462.1| YojL [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|407074595|gb|EKE47585.1| YojL [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|449851502|gb|AGF28494.1| protein YojL [Bacillus amyloliquefaciens IT-45]
Length = 274
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +T+++ +GDTLWGLS +YG SI++IK N L D IY G+ L I
Sbjct: 22 AASAQTIKVKKGDTLWGLSNRYGTSINSIKSENKLKSDIIYIGQTLSI 69
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++V+GD+LW ++ KY ++++ +K NGL D I G+ L
Sbjct: 87 TYKVVKGDSLWKIANKYKMTVNQLKSLNGLKTDLIRIGQVL 127
>gi|429504439|ref|YP_007185623.1| hypothetical protein B938_04625 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429486029|gb|AFZ89953.1| hypothetical protein B938_04625 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 274
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +T+++ +GDTLWGLS +YG SI++IK N L D IY G+ L I
Sbjct: 22 AASAQTIKVKKGDTLWGLSNRYGTSINSIKSENKLKSDIIYIGQTLSI 69
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++V+GD+LW ++ KY ++++ +K NGL D I G+ L
Sbjct: 87 TYKVVKGDSLWKIANKYKMTVNQLKSLNGLKTDLIRIGQVL 127
>gi|384264504|ref|YP_005420211.1| protein YojL [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|387897449|ref|YP_006327745.1| putative endopeptidase [Bacillus amyloliquefaciens Y2]
gi|380497857|emb|CCG48895.1| YojL [Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|387171559|gb|AFJ61020.1| putative endopeptidase [Bacillus amyloliquefaciens Y2]
Length = 274
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +T+++ +GDTLWGLS +YG SI++IK N L D IY G+ L I
Sbjct: 22 AASAQTIKVKKGDTLWGLSNRYGTSINSIKSENKLKSDIIYIGQTLSI 69
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++V+GD+LW ++ KY ++++ +K NGL D I G+ L
Sbjct: 87 TYKVVKGDSLWKIANKYKMTVNQLKSLNGLKTDLIRIGQVL 127
>gi|347549998|ref|YP_004856326.1| putative autolysin, N-acetylmuramidase [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346983069|emb|CBW87111.1| Putative autolysin, N-acetylmuramidase [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 447
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++P ++ +T + +GD+LW +SR+Y ++D IK N L G+TIY G+KL I
Sbjct: 395 NKPSTSATKTHTVKKGDSLWSVSRQYKTTVDNIKSWNKLKGNTIYVGQKLTIK 447
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T +V+GD+LW ++ KY V++ +K N L D IY G+KL
Sbjct: 257 TYTVVKGDSLWKIANKYKVTVANLKSWNNLKSDNIYIGQKL 297
>gi|52079420|ref|YP_078211.1| cell wall hydrolase phosphatase-associated protein [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|319646799|ref|ZP_08001028.1| LytE protein [Bacillus sp. BT1B_CT2]
gi|404488282|ref|YP_006712388.1| cell wall hydrolase LytE [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423681381|ref|ZP_17656220.1| cell wall hydrolase phosphatase-associated protein [Bacillus
licheniformis WX-02]
gi|52002631|gb|AAU22573.1| cell wall hydrolase phosphatase-associated protein [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|52347282|gb|AAU39916.1| cell wall hydrolase LytE [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317391387|gb|EFV72185.1| LytE protein [Bacillus sp. BT1B_CT2]
gi|383438155|gb|EID45930.1| cell wall hydrolase phosphatase-associated protein [Bacillus
licheniformis WX-02]
Length = 277
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +T+ + +GDTLWG S+KYG ++ IK+ N L D IY G++L I
Sbjct: 22 AASAQTITVKKGDTLWGFSKKYGTTVSKIKQENKLKSDIIYIGQRLSI 69
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++V+GD+LW +SR YG++++ +K NGL D I G+ L
Sbjct: 86 THKVVKGDSLWKISRTYGMTVNELKTLNGLKTDLIRIGQVL 126
>gi|443634644|ref|ZP_21118817.1| cell wall-binding protein [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
gi|443345451|gb|ELS59515.1| cell wall-binding protein [Bacillus subtilis subsp. inaquosorum
KCTC 13429]
Length = 287
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + + + +GDTLWG+S+K GV++ +KE N L+ D I+AG+KL I
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNKLTSDKIFAGEKLTI 69
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S E + I GDTL +++K+G +++ +K N LS D IYAG L +
Sbjct: 70 SSEETTTSGQYTIKAGDTLSKIAQKFGTTVNNLKVWNNLSSDMIYAGSTLSV 121
>gi|168062440|ref|XP_001783188.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665330|gb|EDQ52019.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 245
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLS-GDTIYAGKKLIIP 142
++ +TV++ GDTLWG++RKY VS+DA+ +NG+S GD+I G+ +++P
Sbjct: 190 HKSAGKTVQVRDGDTLWGIARKYNVSVDALMASNGISDGDSIVVGEMIVLP 240
>gi|381179027|ref|ZP_09887890.1| Lytic transglycosylase catalytic [Treponema saccharophilum DSM
2985]
gi|380769042|gb|EIC03018.1| Lytic transglycosylase catalytic [Treponema saccharophilum DSM
2985]
Length = 427
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 64/131 (48%), Gaps = 12/131 (9%)
Query: 15 AENDGSGDGREAAVAKTAGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPP 74
A+ D GR ++ K A + I + LK LNP + RN T Q P++ P
Sbjct: 304 AQYDFVKTGRPVSLMKIASEM---NIGVKTLKRLNP-SLVRNVTPPMQGF-----PLRVP 354
Query: 75 PQQPIVTKPSICTEKSEPEPASCRTVE--IVRGDTLWGLSRKYGVSIDAIKEANGLSGDT 132
+ K ++ + E AS VE I+ GDTLWGLSR YG +D I + NG+S T
Sbjct: 355 LGTAEIAKKAVEKLQKESGGASSFYVEHKIISGDTLWGLSRTYGCKVDDICDLNGISQKT 414
Query: 133 IYA-GKKLIIP 142
I GK L IP
Sbjct: 415 ILKLGKVLYIP 425
>gi|425738882|ref|ZP_18857133.1| endopeptidase LytF [Staphylococcus massiliensis S46]
gi|425478508|gb|EKU45699.1| endopeptidase LytF [Staphylococcus massiliensis S46]
Length = 137
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
SE E A+ V+ GDTLWG+++ Y S+ +KE NGL+GDTIY + L +P
Sbjct: 22 SESEAATSYKVK--AGDTLWGIAQSYHTSVAKLKEMNGLTGDTIYVNQYLSVP 72
>gi|423547046|ref|ZP_17523404.1| hypothetical protein IGO_03481 [Bacillus cereus HuB5-5]
gi|401178767|gb|EJQ85940.1| hypothetical protein IGO_03481 [Bacillus cereus HuB5-5]
Length = 124
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C + S E ++ TV+ + DTLWG+S++YGVSI AIK+AN D + G++L IP
Sbjct: 20 VCNQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQAIKQANNKGNDQAFIGEQLHIP 74
>gi|398310002|ref|ZP_10513476.1| cell wall hydrolase [Bacillus mojavensis RO-H-1]
Length = 338
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS ++V++ +GDTLW LSRKYG +I IK N L D IYAG+ L I
Sbjct: 22 AASAQSVKVKKGDTLWDLSRKYGTTISKIKSENKLHSDIIYAGQTLSI 69
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 29/39 (74%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
++V GD+LW +S+KYG++I+ +K+ NGL D + G+ L
Sbjct: 88 KVVSGDSLWKISKKYGMTINELKKLNGLKSDLLRIGQVL 126
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++V GD+L +++KYG ++ +K NGL D IY G+ L
Sbjct: 149 TYKVVSGDSLSKIAKKYGTTVSKLKSLNGLKSDLIYVGQVL 189
>gi|308172929|ref|YP_003919634.1| LytE [Bacillus amyloliquefaciens DSM 7]
gi|307605793|emb|CBI42164.1| LytE [Bacillus amyloliquefaciens DSM 7]
Length = 276
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS +T+++ +GDTLWGLS +YG SI++IK N L D IY G+ L
Sbjct: 22 AASAQTIKVKKGDTLWGLSNQYGTSINSIKSENKLKSDIIYIGQTL 67
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++V+GD+LW ++ KY +S++ +K NGL D I G+ L
Sbjct: 87 TYKVVKGDSLWKIANKYKMSVNQLKSLNGLKTDLIRIGQVL 127
>gi|384158482|ref|YP_005540555.1| LytE [Bacillus amyloliquefaciens TA208]
gi|384167531|ref|YP_005548909.1| cell wall hydrolase; phosphatase-associated protein (major
autolysin) [Bacillus amyloliquefaciens XH7]
gi|328552570|gb|AEB23062.1| LytE [Bacillus amyloliquefaciens TA208]
gi|341826810|gb|AEK88061.1| cell wall hydrolase; phosphatase-associated protein (major
autolysin) [Bacillus amyloliquefaciens XH7]
Length = 276
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS +T+++ +GDTLWGLS +YG SI++IK N L D IY G+ L
Sbjct: 22 AASAQTIKVKKGDTLWGLSNQYGTSINSIKSENKLKSDIIYIGQTL 67
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++V+GD+LW ++ KY +S++ +K NGL D I G+ L
Sbjct: 87 TYKVVKGDSLWKIANKYKMSVNQLKSLNGLKTDLIRIGQVL 127
>gi|414073567|ref|YP_006998784.1| N-acetylglucosaminidase [Lactococcus lactis subsp. cremoris
UC509.9]
gi|413973487|gb|AFW90951.1| N-acetylglucosaminidase [Lactococcus lactis subsp. cremoris
UC509.9]
Length = 437
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+PAS +V++ GDTLW LS KY SI +K N LS DTIY G+ LI+
Sbjct: 314 KPASQTSVKVKSGDTLWALSVKYKTSIAQLKSWNHLSSDTIYIGQNLIV 362
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+S++YG+S+ I+ AN L IY G+KL++
Sbjct: 250 GDTLWGISQRYGISVAQIQSANNLKSTIIYIGQKLLL 286
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++V+GDTLWGLS+K G I +IK N LS DTI+ G+ L I
Sbjct: 396 KVVKGDTLWGLSQKSGSPIASIKAWNHLSSDTIFIGQYLRI 436
>gi|146286024|sp|P0C2T5.1|ACMA_LACLC RecName: Full=Probable N-acetylmuramidase; AltName: Full=Autolysin;
AltName: Full=Lysozyme; AltName: Full=Peptidoglycan
hydrolase; Flags: Precursor
gi|2707292|gb|AAB93629.1| N-acetylmuramidase [Lactococcus lactis]
Length = 437
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+PAS +V++ GDTLW LS KY SI +K N LS DTIY G+ LI+
Sbjct: 314 KPASQTSVKVKSGDTLWALSVKYKTSIAQLKSWNHLSSDTIYIGQNLIV 362
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+S++YG+S+ I+ AN L IY G+KL++
Sbjct: 250 GDTLWGISQRYGISVAQIQSANNLKSTIIYIGQKLLL 286
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++V+GDTLWGLS+K G I +IK N LS DTI G+ L I
Sbjct: 396 KVVKGDTLWGLSQKSGSPIASIKAWNHLSSDTILIGQYLRI 436
>gi|384163415|ref|YP_005544794.1| hypothetical protein LL3_01024 [Bacillus amyloliquefaciens LL3]
gi|328910970|gb|AEB62566.1| hypothetical protein LL3_01024 [Bacillus amyloliquefaciens LL3]
Length = 276
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS +T+++ +GDTLWGLS +YG SI++IK N L D IY G+ L
Sbjct: 22 AASAQTIKVKKGDTLWGLSNQYGTSINSIKSENKLKSDIIYIGQTL 67
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++V+GD+LW ++ KY +S++ +K NGL D I G+ L
Sbjct: 87 TYKVVKGDSLWKIANKYKMSVNQLKSLNGLKTDLICIGQVL 127
>gi|406671513|ref|ZP_11078752.1| hypothetical protein HMPREF9706_01012 [Facklamia hominis CCUG
36813]
gi|405580763|gb|EKB54822.1| hypothetical protein HMPREF9706_01012 [Facklamia hominis CCUG
36813]
Length = 616
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 52/110 (47%), Gaps = 16/110 (14%)
Query: 39 GIAISILKALNPLNKNR---NETTQPQPIAESTQP---IQPPPQQPIVTKPSICTEKSEP 92
G+ I LK N L N + P+ + P P P +P+VTKPS
Sbjct: 213 GVTIQQLKQWNNLRSNYIYAGNQLRVSPVISTPSPNNQANPTPSKPVVTKPS-------- 264
Query: 93 EPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P+ V V+ GD+LW ++ KYG +I IK N L + IYAG +L +
Sbjct: 265 -PSVTANVYTVKPGDSLWAIATKYGTTIQNIKTWNNLKSNYIYAGNQLYV 313
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 21/118 (17%)
Query: 39 GIAISILKALNPLNKNR----NETTQPQPIAESTQ--PIQPPPQQPIVTKPSICTEKSEP 92
G+ + +K N L+ N N+ QP A +T+ +QP Q + +S+P
Sbjct: 52 GVTVDNIKQWNNLSSNYLFTGNQLIVSQPQASTTEQASVQPSNQS------TSTVTQSQP 105
Query: 93 EPA---------SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+P S + GD+LW ++ KYG SI +K+ N LS + IY GK+L +
Sbjct: 106 QPTGTGMTAAPQSSGDYTVKAGDSLWAIANKYGTSIQQLKQWNNLSSNFIYPGKQLAV 163
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 7/64 (10%)
Query: 80 VTKPSICTEKSEP-EPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGK 137
V KPS+ +P +P S +VR GD+LW ++ ++GV+I +K+ N L + IYAG
Sbjct: 180 VNKPSV-----QPTQPTSAAKSYVVRPGDSLWAIATRHGVTIQQLKQWNNLRSNYIYAGN 234
Query: 138 KLII 141
+L +
Sbjct: 235 QLRV 238
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 12/110 (10%)
Query: 39 GIAISILKALNPLNKNR----NETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEP 94
G I +K N L N N+ QP +T P ++P V++ S P
Sbjct: 288 GTTIQNIKTWNNLKSNYIYAGNQLYVKQP---NTNASPTPDKKPTVSQNS--GNHQAPTQ 342
Query: 95 ASCR---TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ + T + GD+LW ++ K+G++I +K N L + IY G +L++
Sbjct: 343 ATTQGPATYTVKAGDSLWAIATKHGITIPELKRLNNLRSNYIYPGNQLVV 392
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+V G+ L ++ +YGV++D IK+ N LS + ++ G +LI+
Sbjct: 38 VVHGEYLQLIADRYGVTVDNIKQWNNLSSNYLFTGNQLIV 77
>gi|423511795|ref|ZP_17488326.1| hypothetical protein IG3_03292 [Bacillus cereus HuA2-1]
gi|402450056|gb|EJV81890.1| hypothetical protein IG3_03292 [Bacillus cereus HuA2-1]
Length = 265
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C + S E ++ TV+ + DTLWG+S++YGVSI AIK+AN D + G++L IP
Sbjct: 20 VCNQ-STAEASTTHTVK--KNDTLWGISKQYGVSIQAIKQANNKGNDQAFIGEQLHIP 74
>gi|229098231|ref|ZP_04229178.1| Cell wall hydrolase [Bacillus cereus Rock3-29]
gi|229117249|ref|ZP_04246627.1| Cell wall hydrolase [Bacillus cereus Rock1-3]
gi|228666149|gb|EEL21613.1| Cell wall hydrolase [Bacillus cereus Rock1-3]
gi|228685129|gb|EEL39060.1| Cell wall hydrolase [Bacillus cereus Rock3-29]
Length = 278
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C + S E ++ TV+ + DTLWG+S++YGVSI AIK+AN D + G++L IP
Sbjct: 33 VCNQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQAIKQANNKGNDQAFIGEQLHIP 87
>gi|407706168|ref|YP_006829753.1| transcription elongation protein NusA [Bacillus thuringiensis MC28]
gi|407383853|gb|AFU14354.1| Cell wall hydrolase [Bacillus thuringiensis MC28]
Length = 278
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C + S E ++ TV+ + DTLWG+S++YGVSI AIK+AN D + G++L IP
Sbjct: 33 VCNQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQAIKQANNKGNDQAFIGEQLHIP 87
>gi|398305451|ref|ZP_10509037.1| cell wall hydrolase [Bacillus vallismortis DV1-F-3]
Length = 336
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +++++ +GDTLWG+SRKY +I IK N L DTIY G+ L I
Sbjct: 22 AASAQSIQVKKGDTLWGISRKYDTTISKIKSENSLRSDTIYVGQTLSI 69
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++ GD+LW +S+ YG+++ +K+ NGL D + G+ L
Sbjct: 88 TYKVKSGDSLWKISKTYGMTVSELKKMNGLKSDLLRIGQVL 128
>gi|125623153|ref|YP_001031636.1| N-acetylglucosaminidase [Lactococcus lactis subsp. cremoris MG1363]
gi|389853477|ref|YP_006355721.1| N-acetylglucosaminidase [Lactococcus lactis subsp. cremoris NZ9000]
gi|146286025|sp|A2RHZ5.1|ACMA_LACLM RecName: Full=Probable N-acetylmuramidase; AltName: Full=Autolysin;
AltName: Full=Lysozyme; AltName: Full=Peptidoglycan
hydrolase; Flags: Precursor
gi|755216|gb|AAC33367.1| N-acetylmuramidase [Lactococcus lactis subsp. cremoris MG1363]
gi|124491961|emb|CAL96887.1| N-acetylglucosaminidase [Lactococcus lactis subsp. cremoris MG1363]
gi|300069899|gb|ADJ59299.1| N-acetylglucosaminidase [Lactococcus lactis subsp. cremoris NZ9000]
Length = 437
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+P S TV++ GDTLW LS KY SI +K N LS DTIY G+ LI+
Sbjct: 314 KPTSQTTVKVKSGDTLWALSVKYKTSIAQLKSWNHLSSDTIYIGQNLIV 362
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+S++YG+S+ I+ AN L IY G+KL++
Sbjct: 250 GDTLWGISQRYGISVAQIQSANNLKSTIIYIGQKLVL 286
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++V+GDTLWGLS+K G I +IK N LS DTI G+ L I
Sbjct: 396 KVVKGDTLWGLSQKSGSPIASIKAWNHLSSDTILIGQYLRI 436
>gi|29378553|gb|AAO83978.1| invasion associated protein p60 [Listeria innocua]
Length = 471
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Query: 55 RNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSR 113
++ T Q +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 155 KDTTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALSV 214
Query: 114 KYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 215 KYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|311068598|ref|YP_003973521.1| YocH protein [Bacillus atrophaeus 1942]
gi|310869115|gb|ADP32590.1| YocH [Bacillus atrophaeus 1942]
Length = 310
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + + + +GDTLWG+S+K GV++ +KE N LS D I AG+KL I
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNQLSTDIIIAGEKLTI 69
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S E + + GD+LW +++KYG+SI+++K N L D IYAG L +
Sbjct: 70 SSEEETTAGQYTVKEGDSLWKIAQKYGISINSLKSWNNLDSDMIYAGTTLAV 121
>gi|29378533|gb|AAO83968.1| invasion associated protein p60 [Listeria innocua]
Length = 471
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|423623164|ref|ZP_17598942.1| hypothetical protein IK3_01762 [Bacillus cereus VD148]
gi|401258941|gb|EJR65119.1| hypothetical protein IK3_01762 [Bacillus cereus VD148]
Length = 323
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C + S E ++ TV+ + DTLWG+S++YGVSI AIK+AN D + G++L IP
Sbjct: 78 VCNQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQAIKQANNKGNDQAFIGEQLHIP 132
>gi|311029606|ref|ZP_07707696.1| cell wall hydrolase SleB [Bacillus sp. m3-13]
Length = 224
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P P S T+ + +GDTL+ LS+KYG ++ A+KE N LS +TIY+G+KL
Sbjct: 175 PSPESF-TITVKKGDTLYSLSKKYGTTVAALKELNELSSNTIYSGQKL 221
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Query: 91 EPEPASC--RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
EP AS + I +GDTL+ LS+KY V+ID +K+ N L+ I AG+KLII
Sbjct: 27 EPAFASSTDEIITIKKGDTLYSLSKKYDVTIDELKKMNDLTSSKIIAGEKLIIK 80
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 30/43 (69%)
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ + +GDTL+ L++ +G ++ +KE N L+ + IY G+KL++
Sbjct: 85 IMVKKGDTLYSLAKTHGTTVKKLKEWNLLTYNNIYIGQKLLVK 127
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 29/43 (67%)
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+E+ +GDTL+ L++K S++ +K N L+ DTI G++L +
Sbjct: 132 MEVKKGDTLYSLAKKSNNSVEQLKAWNNLTSDTIKIGQQLYLS 174
>gi|89098582|ref|ZP_01171465.1| hypothetical protein B14911_10232 [Bacillus sp. NRRL B-14911]
gi|89086827|gb|EAR65945.1| hypothetical protein B14911_10232 [Bacillus sp. NRRL B-14911]
Length = 322
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDT 132
P Q+ V P + S+P AS TV V+ GDTLWG+S KY VS+ ++K+ N LS DT
Sbjct: 58 PGQELSVIAPH--SHTSQP-AASGTTVHTVQAGDTLWGISLKYDVSVASLKQWNRLSTDT 114
Query: 133 IYAGKKL 139
IY G+KL
Sbjct: 115 IYKGQKL 121
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Query: 91 EPEPA---SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P PA S TV+ +GD+LW +S + S+ +K N LS DTIYAG+KL
Sbjct: 137 NPAPAQTGSSYTVQ--KGDSLWSISSRNNTSVLQLKALNNLSSDTIYAGQKL 186
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+T ++ GDTLW +SR+Y +++ ++ N LSG IY G++L +
Sbjct: 21 KTHKVASGDTLWKISRQYNINVGELQSWNKLSGAVIYPGQELSV 64
>gi|423550493|ref|ZP_17526820.1| hypothetical protein IGW_01124 [Bacillus cereus ISP3191]
gi|401190109|gb|EJQ97159.1| hypothetical protein IGW_01124 [Bacillus cereus ISP3191]
Length = 265
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVQ--KNDTLWGISKQYGVSIQSIKQANHKGNDQTFIGEQLHIP 74
>gi|301055246|ref|YP_003793457.1| cell wall hydrolase [Bacillus cereus biovar anthracis str. CI]
gi|300377415|gb|ADK06319.1| putative cell wall hydrolase [Bacillus cereus biovar anthracis str.
CI]
Length = 265
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVQ--KNDTLWGISKQYGVSIQSIKQANHKGNDQTFIGEQLHIP 74
>gi|423378451|ref|ZP_17355735.1| hypothetical protein IC9_01804 [Bacillus cereus BAG1O-2]
gi|423441507|ref|ZP_17418413.1| hypothetical protein IEA_01837 [Bacillus cereus BAG4X2-1]
gi|423464581|ref|ZP_17441349.1| hypothetical protein IEK_01768 [Bacillus cereus BAG6O-1]
gi|423533923|ref|ZP_17510341.1| hypothetical protein IGI_01755 [Bacillus cereus HuB2-9]
gi|401635218|gb|EJS52974.1| hypothetical protein IC9_01804 [Bacillus cereus BAG1O-2]
gi|402418168|gb|EJV50468.1| hypothetical protein IEA_01837 [Bacillus cereus BAG4X2-1]
gi|402420848|gb|EJV53119.1| hypothetical protein IEK_01768 [Bacillus cereus BAG6O-1]
gi|402464142|gb|EJV95842.1| hypothetical protein IGI_01755 [Bacillus cereus HuB2-9]
Length = 323
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C + S E ++ TV+ + DTLWG+S++YGVSI AIK+AN D + G++L IP
Sbjct: 78 VCNQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQAIKQANNKGNDQAFIGEQLHIP 132
>gi|17380517|sp|Q01836.2|P60_LISIN RecName: Full=Probable endopeptidase p60; AltName:
Full=Invasion-associated protein p60; Flags: Precursor
gi|52550797|gb|AAU84444.1| invasion-associated protein p60 [Listeria innocua]
gi|52550799|gb|AAU84445.1| invasion-associated protein p60 [Listeria innocua]
Length = 467
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|423099691|ref|ZP_17087398.1| protein P60 [Listeria innocua ATCC 33091]
gi|370793776|gb|EHN61601.1| protein P60 [Listeria innocua ATCC 33091]
Length = 469
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|52550801|gb|AAU84446.1| invasion-associated protein p60 [Listeria innocua]
Length = 463
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|52550783|gb|AAU84437.1| invasion-associated protein p60 [Listeria innocua]
gi|52550785|gb|AAU84438.1| invasion-associated protein p60 [Listeria innocua]
gi|52550787|gb|AAU84439.1| invasion-associated protein p60 [Listeria innocua]
gi|52550791|gb|AAU84441.1| invasion-associated protein p60 [Listeria innocua]
Length = 471
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|229104327|ref|ZP_04234996.1| Cell wall hydrolase [Bacillus cereus Rock3-28]
gi|228679025|gb|EEL33233.1| Cell wall hydrolase [Bacillus cereus Rock3-28]
Length = 310
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C + S E ++ TV+ + DTLWG+S++YGVSI AIK+AN D + G++L IP
Sbjct: 65 VCNQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQAIKQANNKGNDQAFIGEQLHIP 119
>gi|29378511|gb|AAO83957.1| invasion associated protein p60 [Listeria innocua]
Length = 473
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+A+ L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKASNLTTDKIVPGQKLQV 71
>gi|347014921|gb|AEO72014.1| invasion associated protein p60 [Listeria innocua]
Length = 481
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|347014919|gb|AEO72013.1| invasion associated protein p60 [Listeria innocua]
Length = 467
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|34014941|gb|AAQ56224.1| invasion-associated protein p60 [Listeria innocua]
Length = 469
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|34014943|gb|AAQ56225.1| invasion-associated protein p60 [Listeria innocua]
Length = 468
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 22 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|30263763|ref|NP_846140.1| cell wall hydrolase [Bacillus anthracis str. Ames]
gi|47529181|ref|YP_020530.1| cell wall hydrolase [Bacillus anthracis str. 'Ames Ancestor']
gi|49186607|ref|YP_029859.1| cell wall hydrolase [Bacillus anthracis str. Sterne]
gi|49478364|ref|YP_037823.1| cell wall hydrolase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|65321085|ref|ZP_00394044.1| COG3773: Cell wall hydrolyses involved in spore germination
[Bacillus anthracis str. A2012]
gi|118478983|ref|YP_896134.1| cell wall hydrolase [Bacillus thuringiensis str. Al Hakam]
gi|165872406|ref|ZP_02217041.1| putative cell wall hydrolase [Bacillus anthracis str. A0488]
gi|167639879|ref|ZP_02398148.1| putative cell wall hydrolase [Bacillus anthracis str. A0193]
gi|170687867|ref|ZP_02879081.1| putative cell wall hydrolase [Bacillus anthracis str. A0465]
gi|170706763|ref|ZP_02897221.1| putative cell wall hydrolase [Bacillus anthracis str. A0389]
gi|177652106|ref|ZP_02934652.1| putative cell wall hydrolase [Bacillus anthracis str. A0174]
gi|190568467|ref|ZP_03021374.1| putative cell wall hydrolase [Bacillus anthracis str.
Tsiankovskii-I]
gi|196044681|ref|ZP_03111916.1| putative cell wall hydrolase [Bacillus cereus 03BB108]
gi|218904890|ref|YP_002452724.1| putative cell wall hydrolase [Bacillus cereus AH820]
gi|225865743|ref|YP_002751121.1| putative cell wall hydrolase [Bacillus cereus 03BB102]
gi|227813335|ref|YP_002813344.1| putative cell wall hydrolase [Bacillus anthracis str. CDC 684]
gi|228928810|ref|ZP_04091844.1| Cell wall hydrolase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|228935058|ref|ZP_04097888.1| Cell wall hydrolase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228947422|ref|ZP_04109713.1| Cell wall hydrolase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|229123276|ref|ZP_04252480.1| Cell wall hydrolase [Bacillus cereus 95/8201]
gi|229185994|ref|ZP_04313164.1| Cell wall hydrolase [Bacillus cereus BGSC 6E1]
gi|229599886|ref|YP_002867999.1| putative cell wall hydrolase [Bacillus anthracis str. A0248]
gi|254683534|ref|ZP_05147394.1| putative cell wall hydrolase [Bacillus anthracis str. CNEVA-9066]
gi|254721186|ref|ZP_05182977.1| putative cell wall hydrolase [Bacillus anthracis str. A1055]
gi|254735797|ref|ZP_05193503.1| putative cell wall hydrolase [Bacillus anthracis str. Western North
America USA6153]
gi|254739677|ref|ZP_05197371.1| putative cell wall hydrolase [Bacillus anthracis str. Kruger B]
gi|254751073|ref|ZP_05203112.1| putative cell wall hydrolase [Bacillus anthracis str. Vollum]
gi|254759391|ref|ZP_05211416.1| putative cell wall hydrolase [Bacillus anthracis str. Australia 94]
gi|376267655|ref|YP_005120367.1| Cell wall hydrolase [Bacillus cereus F837/76]
gi|386737580|ref|YP_006210761.1| Cell wall hydrolase [Bacillus anthracis str. H9401]
gi|421510593|ref|ZP_15957484.1| Cell wall hydrolase [Bacillus anthracis str. UR-1]
gi|421640677|ref|ZP_16081257.1| Cell wall hydrolase [Bacillus anthracis str. BF1]
gi|30258407|gb|AAP27626.1| putative cell wall hydrolase [Bacillus anthracis str. Ames]
gi|47504329|gb|AAT33005.1| putative cell wall hydrolase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49180534|gb|AAT55910.1| cell wall hydrolase, putative [Bacillus anthracis str. Sterne]
gi|49329920|gb|AAT60566.1| cell wall hydrolase [Bacillus thuringiensis serovar konkukian str.
97-27]
gi|118418208|gb|ABK86627.1| cell wall hydrolase [Bacillus thuringiensis str. Al Hakam]
gi|164711844|gb|EDR17386.1| putative cell wall hydrolase [Bacillus anthracis str. A0488]
gi|167512280|gb|EDR87657.1| putative cell wall hydrolase [Bacillus anthracis str. A0193]
gi|170128181|gb|EDS97050.1| putative cell wall hydrolase [Bacillus anthracis str. A0389]
gi|170668183|gb|EDT18932.1| putative cell wall hydrolase [Bacillus anthracis str. A0465]
gi|172082475|gb|EDT67540.1| putative cell wall hydrolase [Bacillus anthracis str. A0174]
gi|190560471|gb|EDV14449.1| putative cell wall hydrolase [Bacillus anthracis str.
Tsiankovskii-I]
gi|196024716|gb|EDX63388.1| putative cell wall hydrolase [Bacillus cereus 03BB108]
gi|218537333|gb|ACK89731.1| putative cell wall hydrolase [Bacillus cereus AH820]
gi|225786428|gb|ACO26645.1| putative cell wall hydrolase [Bacillus cereus 03BB102]
gi|227007398|gb|ACP17141.1| putative cell wall hydrolase [Bacillus anthracis str. CDC 684]
gi|228597413|gb|EEK55063.1| Cell wall hydrolase [Bacillus cereus BGSC 6E1]
gi|228660052|gb|EEL15688.1| Cell wall hydrolase [Bacillus cereus 95/8201]
gi|228812275|gb|EEM58605.1| Cell wall hydrolase [Bacillus thuringiensis serovar monterrey BGSC
4AJ1]
gi|228824628|gb|EEM70430.1| Cell wall hydrolase [Bacillus thuringiensis serovar andalousiensis
BGSC 4AW1]
gi|228830895|gb|EEM76498.1| Cell wall hydrolase [Bacillus thuringiensis serovar pondicheriensis
BGSC 4BA1]
gi|229264294|gb|ACQ45931.1| putative cell wall hydrolase [Bacillus anthracis str. A0248]
gi|364513455|gb|AEW56854.1| Cell wall hydrolase [Bacillus cereus F837/76]
gi|384387432|gb|AFH85093.1| Cell wall hydrolase [Bacillus anthracis str. H9401]
gi|401819413|gb|EJT18592.1| Cell wall hydrolase [Bacillus anthracis str. UR-1]
gi|403392240|gb|EJY89496.1| Cell wall hydrolase [Bacillus anthracis str. BF1]
Length = 265
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVQ--KNDTLWGISKQYGVSIQSIKQANHKGNDQTFIGEQLHIP 74
>gi|29378473|gb|AAO83938.1| invasion associated protein p60 [Listeria innocua]
Length = 469
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|196034165|ref|ZP_03101575.1| putative cell wall hydrolase [Bacillus cereus W]
gi|195993239|gb|EDX57197.1| putative cell wall hydrolase [Bacillus cereus W]
Length = 265
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVQ--KNDTLWGISKQYGVSIQSIKQANHKGNDQTFIGEQLHIP 74
>gi|52550793|gb|AAU84442.1| invasion-associated protein p60 [Listeria innocua]
Length = 471
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|16799666|ref|NP_469934.1| invasion associated secreted endopeptidase [Listeria innocua
Clip11262]
gi|16413031|emb|CAC95823.1| P60 extracellular protein, invasion associated protein Iap
[Listeria innocua Clip11262]
Length = 465
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 152 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 211
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 212 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 240
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
>gi|29378491|gb|AAO83947.1| invasion associated protein p60 [Listeria innocua]
Length = 473
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 22 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|423615975|ref|ZP_17591809.1| hypothetical protein IIO_01301 [Bacillus cereus VD115]
gi|401260512|gb|EJR66685.1| hypothetical protein IIO_01301 [Bacillus cereus VD115]
Length = 323
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C + S E ++ TV+ + DTLWG+S++YGVSI AIK+AN D + G++L IP
Sbjct: 78 VCNQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQAIKQANNKGNDQAFIGEQLHIP 132
>gi|422415093|ref|ZP_16492050.1| protein p60 [Listeria innocua FSL J1-023]
gi|313624828|gb|EFR94759.1| protein p60 [Listeria innocua FSL J1-023]
Length = 467
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 152 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 211
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 212 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 240
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
>gi|385837287|ref|YP_005874917.1| putative N-acetylmuramidase precursor [Lactococcus lactis subsp.
cremoris A76]
gi|358748515|gb|AEU39494.1| putative N-acetylmuramidase precursor [Lactococcus lactis subsp.
cremoris A76]
Length = 384
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+PAS +V++ GDTLW LS KY SI +K N LS DTIY G+ LI+
Sbjct: 261 KPASQTSVKVKSGDTLWALSVKYKTSIVQLKSWNHLSSDTIYIGQNLIV 309
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+S++YG+S+ I+ AN L IY G+KL++
Sbjct: 197 GDTLWGISQRYGISVAQIQSANNLKSTIIYIGQKLLL 233
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++V+GDTLWGLS+K G I +IK N LS DTI G+ L I
Sbjct: 343 KVVKGDTLWGLSQKSGSPIASIKAWNHLSSDTILIGQYLRI 383
>gi|168012098|ref|XP_001758739.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689876|gb|EDQ76245.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 555
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLS-GDTIYAGKKLIIP 142
+C+T+++ +GDTLWG+SRKY V+++A+ NG+ GD I AG+ ++ P
Sbjct: 106 NCKTIQVHKGDTLWGISRKYNVTVEALMATNGIKDGDNIAAGESIMWP 153
>gi|228966690|ref|ZP_04127735.1| Cell wall hydrolase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|402558936|ref|YP_006601660.1| cell wall hydrolase [Bacillus thuringiensis HD-771]
gi|228792990|gb|EEM40547.1| Cell wall hydrolase [Bacillus thuringiensis serovar sotto str.
T04001]
gi|401787588|gb|AFQ13627.1| cell wall hydrolase [Bacillus thuringiensis HD-771]
Length = 265
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDKTFIGEQLHIP 74
>gi|229129040|ref|ZP_04258013.1| Cell wall hydrolase [Bacillus cereus BDRD-Cer4]
gi|6759475|emb|CAB69802.1| putative cell wall hydrolase [Bacillus cereus ATCC 14579]
gi|228654277|gb|EEL10142.1| Cell wall hydrolase [Bacillus cereus BDRD-Cer4]
Length = 265
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDKTFIGEQLHIP 74
>gi|423641154|ref|ZP_17616772.1| hypothetical protein IK9_01099 [Bacillus cereus VD166]
gi|423649628|ref|ZP_17625198.1| hypothetical protein IKA_03415 [Bacillus cereus VD169]
gi|401280215|gb|EJR86137.1| hypothetical protein IK9_01099 [Bacillus cereus VD166]
gi|401282908|gb|EJR88805.1| hypothetical protein IKA_03415 [Bacillus cereus VD169]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDKTFIGEQLHIP 74
>gi|374672338|dbj|BAL50229.1| N-acetylmuramidase [Lactococcus lactis subsp. lactis IO-1]
Length = 439
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+PAS T+++ GDTLWGLS KY +I +K N L+ DTI+ G+ LI+
Sbjct: 316 KPASQTTIKVKSGDTLWGLSVKYKTTIAQLKSWNHLNSDTIFIGQNLIV 364
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+S+KYG+S+ I+ AN L IY G+KL++
Sbjct: 248 GDTLWGISQKYGISVAQIQSANNLKSTVIYIGQKLVL 284
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++V+GDTLWGLS+K G I +IK N LS DTI G+ L I
Sbjct: 398 KVVKGDTLWGLSQKSGSPIASIKAWNHLSSDTILIGQYLRI 438
>gi|296504263|ref|YP_003665963.1| cell wall hydrolase CwlJ [Bacillus thuringiensis BMB171]
gi|296325315|gb|ADH08243.1| cell wall hydrolase cwlJ [Bacillus thuringiensis BMB171]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDKTFIGEQLHIP 74
>gi|52550789|gb|AAU84440.1| invasion-associated protein p60 [Listeria innocua]
Length = 471
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETT-QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETT Q +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTPQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|228922477|ref|ZP_04085779.1| Cell wall hydrolase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|423581973|ref|ZP_17558084.1| hypothetical protein IIA_03488 [Bacillus cereus VD014]
gi|423635466|ref|ZP_17611119.1| hypothetical protein IK7_01875 [Bacillus cereus VD156]
gi|228837191|gb|EEM82530.1| Cell wall hydrolase [Bacillus thuringiensis serovar huazhongensis
BGSC 4BD1]
gi|401212852|gb|EJR19593.1| hypothetical protein IIA_03488 [Bacillus cereus VD014]
gi|401278217|gb|EJR84153.1| hypothetical protein IK7_01875 [Bacillus cereus VD156]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDQTFIGEQLHIP 74
>gi|229191889|ref|ZP_04318859.1| Cell wall hydrolase [Bacillus cereus ATCC 10876]
gi|228591440|gb|EEK49289.1| Cell wall hydrolase [Bacillus cereus ATCC 10876]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDQTFIGEQLHIP 74
>gi|228959970|ref|ZP_04121635.1| Cell wall hydrolase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|229047446|ref|ZP_04193038.1| Cell wall hydrolase [Bacillus cereus AH676]
gi|229111236|ref|ZP_04240790.1| Cell wall hydrolase [Bacillus cereus Rock1-15]
gi|229146335|ref|ZP_04274706.1| Cell wall hydrolase [Bacillus cereus BDRD-ST24]
gi|423585826|ref|ZP_17561913.1| hypothetical protein IIE_01238 [Bacillus cereus VD045]
gi|423628844|ref|ZP_17604593.1| hypothetical protein IK5_01696 [Bacillus cereus VD154]
gi|423656624|ref|ZP_17631923.1| hypothetical protein IKG_03612 [Bacillus cereus VD200]
gi|228636968|gb|EEK93427.1| Cell wall hydrolase [Bacillus cereus BDRD-ST24]
gi|228672230|gb|EEL27520.1| Cell wall hydrolase [Bacillus cereus Rock1-15]
gi|228723890|gb|EEL75243.1| Cell wall hydrolase [Bacillus cereus AH676]
gi|228799713|gb|EEM46665.1| Cell wall hydrolase [Bacillus thuringiensis serovar pakistani str.
T13001]
gi|401233172|gb|EJR39668.1| hypothetical protein IIE_01238 [Bacillus cereus VD045]
gi|401268389|gb|EJR74437.1| hypothetical protein IK5_01696 [Bacillus cereus VD154]
gi|401290365|gb|EJR96059.1| hypothetical protein IKG_03612 [Bacillus cereus VD200]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDKTFIGEQLHIP 74
>gi|218898864|ref|YP_002447275.1| cell wall hydrolase [Bacillus cereus G9842]
gi|228902267|ref|ZP_04066427.1| Cell wall hydrolase [Bacillus thuringiensis IBL 4222]
gi|423359251|ref|ZP_17336754.1| hypothetical protein IC1_01231 [Bacillus cereus VD022]
gi|423561831|ref|ZP_17538107.1| hypothetical protein II5_01235 [Bacillus cereus MSX-A1]
gi|434376821|ref|YP_006611465.1| cell wall hydrolase [Bacillus thuringiensis HD-789]
gi|218544178|gb|ACK96572.1| putative cell wall hydrolase [Bacillus cereus G9842]
gi|228857382|gb|EEN01882.1| Cell wall hydrolase [Bacillus thuringiensis IBL 4222]
gi|401085123|gb|EJP93369.1| hypothetical protein IC1_01231 [Bacillus cereus VD022]
gi|401202088|gb|EJR08953.1| hypothetical protein II5_01235 [Bacillus cereus MSX-A1]
gi|401875378|gb|AFQ27545.1| cell wall hydrolase [Bacillus thuringiensis HD-789]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDKTFIGEQLHIP 74
>gi|229071259|ref|ZP_04204483.1| Cell wall hydrolase [Bacillus cereus F65185]
gi|229081016|ref|ZP_04213529.1| Cell wall hydrolase [Bacillus cereus Rock4-2]
gi|423437218|ref|ZP_17414199.1| hypothetical protein IE9_03399 [Bacillus cereus BAG4X12-1]
gi|228702330|gb|EEL54803.1| Cell wall hydrolase [Bacillus cereus Rock4-2]
gi|228711880|gb|EEL63831.1| Cell wall hydrolase [Bacillus cereus F65185]
gi|401120373|gb|EJQ28169.1| hypothetical protein IE9_03399 [Bacillus cereus BAG4X12-1]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDQTFIGEQLHIP 74
>gi|42782845|ref|NP_980092.1| cell wall hydrolase [Bacillus cereus ATCC 10987]
gi|42738772|gb|AAS42700.1| cell wall hydrolase, putative [Bacillus cereus ATCC 10987]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C+ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSH-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDQTFIGEQLHIP 74
>gi|229180040|ref|ZP_04307384.1| Cell wall hydrolase [Bacillus cereus 172560W]
gi|423412432|ref|ZP_17389552.1| hypothetical protein IE1_01736 [Bacillus cereus BAG3O-2]
gi|423431783|ref|ZP_17408787.1| hypothetical protein IE7_03599 [Bacillus cereus BAG4O-1]
gi|228603249|gb|EEK60726.1| Cell wall hydrolase [Bacillus cereus 172560W]
gi|401104500|gb|EJQ12477.1| hypothetical protein IE1_01736 [Bacillus cereus BAG3O-2]
gi|401116539|gb|EJQ24377.1| hypothetical protein IE7_03599 [Bacillus cereus BAG4O-1]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDQTFIGEQLHIP 74
>gi|218231723|ref|YP_002368566.1| cell wall hydrolase [Bacillus cereus B4264]
gi|218159680|gb|ACK59672.1| putative cell wall hydrolase [Bacillus cereus B4264]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDQTFIGEQLHIP 74
>gi|228940841|ref|ZP_04103401.1| Cell wall hydrolase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|228973761|ref|ZP_04134339.1| Cell wall hydrolase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228980317|ref|ZP_04140628.1| Cell wall hydrolase [Bacillus thuringiensis Bt407]
gi|229151964|ref|ZP_04280160.1| Cell wall hydrolase [Bacillus cereus m1550]
gi|384187765|ref|YP_005573661.1| cell wall hydrolase cwlJ [Bacillus thuringiensis serovar chinensis
CT-43]
gi|410676084|ref|YP_006928455.1| cell wall hydrolase CwlJ [Bacillus thuringiensis Bt407]
gi|452200145|ref|YP_007480226.1| Cell wall hydrolase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
gi|228631519|gb|EEK88152.1| Cell wall hydrolase [Bacillus cereus m1550]
gi|228779422|gb|EEM27678.1| Cell wall hydrolase [Bacillus thuringiensis Bt407]
gi|228786007|gb|EEM34008.1| Cell wall hydrolase [Bacillus thuringiensis serovar thuringiensis
str. T01001]
gi|228818855|gb|EEM64920.1| Cell wall hydrolase [Bacillus thuringiensis serovar berliner ATCC
10792]
gi|326941474|gb|AEA17370.1| cell wall hydrolase cwlJ [Bacillus thuringiensis serovar chinensis
CT-43]
gi|409175213|gb|AFV19518.1| cell wall hydrolase CwlJ [Bacillus thuringiensis Bt407]
gi|452105538|gb|AGG02478.1| Cell wall hydrolase [Bacillus thuringiensis serovar thuringiensis
str. IS5056]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDKTFIGEQLHIP 74
>gi|228954040|ref|ZP_04116069.1| Cell wall hydrolase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|423425901|ref|ZP_17402932.1| hypothetical protein IE5_03590 [Bacillus cereus BAG3X2-2]
gi|423503558|ref|ZP_17480150.1| hypothetical protein IG1_01124 [Bacillus cereus HD73]
gi|449090707|ref|YP_007423148.1| Cell wall hydrolase [Bacillus thuringiensis serovar kurstaki str.
HD73]
gi|228805606|gb|EEM52196.1| Cell wall hydrolase [Bacillus thuringiensis serovar kurstaki str.
T03a001]
gi|401110648|gb|EJQ18547.1| hypothetical protein IE5_03590 [Bacillus cereus BAG3X2-2]
gi|402458912|gb|EJV90652.1| hypothetical protein IG1_01124 [Bacillus cereus HD73]
gi|449024464|gb|AGE79627.1| Cell wall hydrolase [Bacillus thuringiensis serovar kurstaki str.
HD73]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDQTFIGEQLHIP 74
>gi|423385268|ref|ZP_17362524.1| hypothetical protein ICE_03014 [Bacillus cereus BAG1X1-2]
gi|423528375|ref|ZP_17504820.1| hypothetical protein IGE_01927 [Bacillus cereus HuB1-1]
gi|401635324|gb|EJS53079.1| hypothetical protein ICE_03014 [Bacillus cereus BAG1X1-2]
gi|402452038|gb|EJV83857.1| hypothetical protein IGE_01927 [Bacillus cereus HuB1-1]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDKTFIGEQLHIP 74
>gi|385829840|ref|YP_005867653.1| N-acetylmuramidase [Lactococcus lactis subsp. lactis CV56]
gi|418038245|ref|ZP_12676585.1| Lysozyme [Lactococcus lactis subsp. cremoris CNCM I-1631]
gi|326405848|gb|ADZ62919.1| N-acetylmuramidase [Lactococcus lactis subsp. lactis CV56]
gi|354693588|gb|EHE93340.1| Lysozyme [Lactococcus lactis subsp. cremoris CNCM I-1631]
Length = 439
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+PAS T+++ GDTLWGLS KY +I +K N L+ DTI+ G+ LI+
Sbjct: 316 KPASQTTIKVKSGDTLWGLSVKYKTTIAQLKSWNHLNSDTIFIGQNLIV 364
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+S+KYG+S+ I+ AN L IY G+KL++
Sbjct: 248 GDTLWGISQKYGISVAQIQSANNLKSTVIYIGQKLVL 284
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++V+GDTLWGLS+K G I +IK N LS DTI G+ L I
Sbjct: 398 KVVKGDTLWGLSQKSGSPIASIKAWNHLSSDTILIGQYLRI 438
>gi|281490761|ref|YP_003352741.1| N-acetylmuramidase [Lactococcus lactis subsp. lactis KF147]
gi|281374530|gb|ADA64051.1| N-acetylmuramidase [Lactococcus lactis subsp. lactis KF147]
Length = 439
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+PAS T+++ GDTLWGLS KY +I +K N L+ DTI+ G+ LI+
Sbjct: 316 KPASQTTIKVKSGDTLWGLSVKYKTTIAQLKSWNHLNSDTIFIGQNLIV 364
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+S+KYG+S+ I+ AN L IY G+KL++
Sbjct: 248 GDTLWGISQKYGISVAQIQSANNLKSTVIYIGQKLVL 284
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++V+GDTLWGLS+K G I +IK N LS DTI G+ L I
Sbjct: 398 KVVKGDTLWGLSQKSGSPIASIKAWNHLSSDTILIGQYLRI 438
>gi|419820762|ref|ZP_14344371.1| YocH protein [Bacillus atrophaeus C89]
gi|388475236|gb|EIM11950.1| YocH protein [Bacillus atrophaeus C89]
Length = 292
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + + + +GDTLWG+S+K GV++ +KE N LS D I AG+KL I
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNQLSTDIIIAGEKLTI 69
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S E + + GD+LW +++KYG+SI+++K N L D IYAG L +
Sbjct: 70 SSEEETTAGQYTVKEGDSLWKIAQKYGISINSLKSWNNLDSDMIYAGTTLAV 121
>gi|15672254|ref|NP_266428.1| autolysin [Lactococcus lactis subsp. lactis Il1403]
gi|15213923|sp|Q9CIT4.1|ACMA_LACLA RecName: Full=Probable N-acetylmuramidase; AltName: Full=Autolysin;
AltName: Full=Lysozyme; AltName: Full=Peptidoglycan
hydrolase; Flags: Precursor
gi|12723133|gb|AAK04370.1|AE006264_9 N-acetylmuramidase [Lactococcus lactis subsp. lactis Il1403]
Length = 439
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+PAS T+++ GDTLWGLS KY +I +K N L+ DTI+ G+ LI+
Sbjct: 316 KPASQTTIKVKSGDTLWGLSVKYKTTIAQLKSWNHLNSDTIFIGQNLIV 364
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+S+KYG+S+ I+ AN L IY G+KL++
Sbjct: 248 GDTLWGISQKYGISVAQIQSANNLKSTVIYIGQKLVL 284
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++V+GDTLWGLS+K G I +IK N LS DTI G+ L I
Sbjct: 398 KVVKGDTLWGLSQKSGSPIASIKAWNHLSSDTILIGQYLRI 438
>gi|168011633|ref|XP_001758507.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690117|gb|EDQ76485.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 398
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
+ V I +GDTLWGLSRKY VS++++K ANG+ GD++ AG + IP
Sbjct: 352 KQVTIQKGDTLWGLSRKYNVSVESLKAANGIVVGDSLDAGDVITIP 397
>gi|228986901|ref|ZP_04147028.1| Cell wall hydrolase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|229197867|ref|ZP_04324583.1| Cell wall hydrolase [Bacillus cereus m1293]
gi|423574638|ref|ZP_17550757.1| hypothetical protein II9_01859 [Bacillus cereus MSX-D12]
gi|228585585|gb|EEK43687.1| Cell wall hydrolase [Bacillus cereus m1293]
gi|228772850|gb|EEM21289.1| Cell wall hydrolase [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|401212163|gb|EJR18909.1| hypothetical protein II9_01859 [Bacillus cereus MSX-D12]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANHKGNDQTFIGEQLHIP 74
>gi|398311053|ref|ZP_10514527.1| cell wall-binding protein [Bacillus mojavensis RO-H-1]
Length = 287
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
AS + + + +GDTLWG+S+K GV++ +KE N L+ DTI G+KL I
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNKLTSDTIITGEKLTIS 70
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S E + I GDTL +++K+G +++ +K N LS D IYAG L +
Sbjct: 70 SSEETTTSGQYTIKAGDTLSKIAQKFGTTVNNLKGWNNLSSDMIYAGSTLSV 121
>gi|365159461|ref|ZP_09355641.1| hypothetical protein HMPREF1014_01104 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363625173|gb|EHL76218.1| hypothetical protein HMPREF1014_01104 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 265
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDKTFIGEQLHIP 74
>gi|229157341|ref|ZP_04285419.1| Cell wall hydrolase [Bacillus cereus ATCC 4342]
gi|228626068|gb|EEK82817.1| Cell wall hydrolase [Bacillus cereus ATCC 4342]
Length = 265
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANHKGNDQTFIGEQLHIP 74
>gi|228909587|ref|ZP_04073410.1| Cell wall hydrolase [Bacillus thuringiensis IBL 200]
gi|228849876|gb|EEM94707.1| Cell wall hydrolase [Bacillus thuringiensis IBL 200]
Length = 265
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDQAFIGEQLHIP 74
>gi|47568260|ref|ZP_00238963.1| LysM-repeat proteins and domains [Bacillus cereus G9241]
gi|47555088|gb|EAL13436.1| LysM-repeat proteins and domains [Bacillus cereus G9241]
Length = 265
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANHKGNDQTFIGEQLHIP 74
>gi|415886010|ref|ZP_11547833.1| spore cortex-lytic enzyme [Bacillus methanolicus MGA3]
gi|387588663|gb|EIJ80984.1| spore cortex-lytic enzyme [Bacillus methanolicus MGA3]
Length = 336
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ +S ++V+GDTLW L+++YGV+++ +K N L DTIY G+ L I
Sbjct: 135 QSSSSTVHKVVKGDTLWELAKQYGVTVEGLKVVNHLQNDTIYIGQTLTI 183
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ +S ++V+GDTLW L+++ G+++D +K+ N D IYAG+ L IP
Sbjct: 80 QSSSSTVHKVVKGDTLWELAKQNGITVDELKKVNNRQNDMIYAGETLTIP 129
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++V+GDTLW L+++ G+++D +K AN D IY G+ L IP
Sbjct: 33 KVVKGDTLWELAKQNGITVDELKNANNRQNDMIYVGETLTIP 74
>gi|295707194|ref|YP_003600269.1| endopeptidase LytF [Bacillus megaterium DSM 319]
gi|294804853|gb|ADF41919.1| endopeptidase LytF [Bacillus megaterium DSM 319]
Length = 348
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
AS TV++ GDTLW LS KY +++A+K N LS +TI+ G+ L IP
Sbjct: 26 ASASTVQVKAGDTLWSLSTKYHTTVEALKSVNKLSSNTIHIGQTLSIP 73
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 42 ISILKALNPLNKNRNETTQPQPI--AESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+ LK++N L+ N Q I A ++QP Q PS PA+ T
Sbjct: 50 VEALKSVNKLSSNTIHIGQTLSIPSASTSQPSNKEEQ------PS--------APATGST 95
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ GDTLW ++ ++ +S++ +K N LS + IY + L +
Sbjct: 96 YKVQSGDTLWKVATRFNMSVEELKRLNALSSNIIYINQTLKV 137
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+++ LK LN L+ N Q + S P +P T P + T
Sbjct: 113 MSVEELKRLNALSSNIIYINQTLKVNGSNSASTPTTSKPAET----------PSKDANGT 162
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ RGD+L ++ + +S+ +K+ NGL+ +TIY ++L +
Sbjct: 163 YKVQRGDSLSKIASTFHMSVSELKQINGLTSNTIYVNQQLKV 204
>gi|229031391|ref|ZP_04187393.1| Cell wall hydrolase [Bacillus cereus AH1271]
gi|228729956|gb|EEL80934.1| Cell wall hydrolase [Bacillus cereus AH1271]
Length = 271
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C +S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 26 VC-HQSTAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDQTFIGEQLHIP 80
>gi|229092795|ref|ZP_04223933.1| Cell wall hydrolase [Bacillus cereus Rock3-42]
gi|228690593|gb|EEL44374.1| Cell wall hydrolase [Bacillus cereus Rock3-42]
Length = 265
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANHKGNDQTFIGEQLHIP 74
>gi|381179963|ref|ZP_09888808.1| Peptidase M23 [Treponema saccharophilum DSM 2985]
gi|380768059|gb|EIC02053.1| Peptidase M23 [Treponema saccharophilum DSM 2985]
Length = 359
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
Query: 99 TVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
TV IV+ G+TL+ +SR YGVS+DAI++ANGLSG+ + +KL +P
Sbjct: 49 TVHIVKKGETLYSISRLYGVSVDAIRDANGLSGNNVRVDQKLSVP 93
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 93 EPASCRTVEIV-RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E A V IV +G+TL+ +SR Y ID IK NGLSG+ + G+KL IP
Sbjct: 102 ESAEESAVHIVQKGETLYSISRLYDRPIDDIKAVNGLSGNNVMVGQKLSIP 152
>gi|110634151|ref|YP_674359.1| peptidase M23B [Chelativorans sp. BNC1]
gi|110285135|gb|ABG63194.1| peptidase M23B [Chelativorans sp. BNC1]
Length = 412
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
EP++ + + GDTL+G++RK GVS+ +KEANGLS I G+ L+IP
Sbjct: 145 EPSAGGSYRVDSGDTLYGIARKTGVSVSQLKEANGLSDGAIRIGQNLVIP 194
>gi|294501845|ref|YP_003565545.1| endopeptidase LytF [Bacillus megaterium QM B1551]
gi|294351782|gb|ADE72111.1| endopeptidase LytF [Bacillus megaterium QM B1551]
Length = 348
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
AS TV++ GDTLW LS KY +++A+K N LS +TI+ G+ L IP
Sbjct: 26 ASASTVQVKAGDTLWSLSTKYHTTVEALKSVNKLSSNTIHIGQTLSIP 73
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 12/98 (12%)
Query: 42 ISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVE 101
+ LK++N L+ N Q I S QP ++ KPS PA+ T +
Sbjct: 50 VEALKSVNKLSSNTIHIGQTLSI-PSVSTSQPSNKEE---KPS--------APATGSTYK 97
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+ GDTLW ++ ++ ++++ +K N LS + IY + L
Sbjct: 98 VQSGDTLWKVATRFNMNVEELKRLNALSSNIIYINQTL 135
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 45 LKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR 104
LK LN L+ N Q + P +P T P + T ++ R
Sbjct: 118 LKRLNALSSNIIYINQTLKVNGCNSASTPTTSKPAET----------PSKDANGTYKVQR 167
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+L ++ + +S+ +K+ NGL+ +TIY ++L
Sbjct: 168 GDSLSKIASTFHMSVSELKQINGLTSNTIYVNQQL 202
>gi|271502156|ref|YP_003335182.1| cell wall hydrolase/autolysin [Dickeya dadantii Ech586]
gi|270345711|gb|ACZ78476.1| cell wall hydrolase/autolysin [Dickeya dadantii Ech586]
Length = 563
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 32 AGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVT-KPSICTEKS 90
+G G+++ ++ +N L K+ Q I S P T KP + + S
Sbjct: 449 SGIAAHYGVSMDAIRDINRLKKDVVWVGQRLKIPSSASSTTRTASVPAATSKPVVASSTS 508
Query: 91 E-PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ A+ ++VRGDTL ++ YGVS+ AI++AN +S T+ G+ LIIP
Sbjct: 509 RVKKTATVIKHKVVRGDTLSDIAAHYGVSMKAIQQANNMSSGTVQLGQTLIIP 561
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 8/83 (9%)
Query: 68 TQPIQPPPQQ---PIV--TKPSICTEKSEP-EPASCRTVE--IVRGDTLWGLSRKYGVSI 119
T P+Q P+Q P+ T+ T+ +EP + AS TV +V G+TL G++ YGVS+
Sbjct: 400 THPLQNVPKQENRPLAPQTQTVKKTQAAEPVQTASGATVRHTVVTGETLSGIAAHYGVSM 459
Query: 120 DAIKEANGLSGDTIYAGKKLIIP 142
DAI++ N L D ++ G++L IP
Sbjct: 460 DAIRDINRLKKDVVWVGQRLKIP 482
>gi|386758676|ref|YP_006231892.1| cell wall-binding protein [Bacillus sp. JS]
gi|384931958|gb|AFI28636.1| exported cell wall-binding protein [Bacillus sp. JS]
Length = 287
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + + + +GDTLWG+S+K GV++ +KE N L+ D I AG+KL I
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNKLTSDKIIAGEKLTI 69
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S E + I GDTL +++K+G +++ +K N LS D IYAG L +
Sbjct: 70 SSEETTTNGQYTIKAGDTLSKIAQKFGTTVNNLKVWNNLSSDMIYAGSTLSV 121
>gi|423401417|ref|ZP_17378590.1| hypothetical protein ICW_01815 [Bacillus cereus BAG2X1-2]
gi|423477878|ref|ZP_17454593.1| hypothetical protein IEO_03336 [Bacillus cereus BAG6X1-1]
gi|401654407|gb|EJS71950.1| hypothetical protein ICW_01815 [Bacillus cereus BAG2X1-2]
gi|402428803|gb|EJV60895.1| hypothetical protein IEO_03336 [Bacillus cereus BAG6X1-1]
Length = 267
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C +S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VC-HQSTAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDQTFIGEQLNIP 74
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Query: 85 ICTEKSEPEPASCR---TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I + ++P+PA+ ++ +GD+L ++++Y V++ +IK+ N ++G+ +Y G+ L I
Sbjct: 83 IVRQNAKPKPANISRQIIYQVQQGDSLETIAKRYNVTVQSIKQINNIAGNKLYTGQHLKI 142
>gi|149182203|ref|ZP_01860684.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. SG-1]
gi|148850062|gb|EDL64231.1| N-acetylmuramoyl-L-alanine amidase [Bacillus sp. SG-1]
Length = 133
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 31/38 (81%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
I +GDTLW LS+KYG+++D +K +NGLS +TIY G K+
Sbjct: 31 IQKGDTLWSLSQKYGMTVDHLKGSNGLSSNTIYEGDKV 68
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 29/45 (64%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ V + +GDTLW LS+KY + +K N L DTIY G+KL IP
Sbjct: 72 KLVTVKKGDTLWSLSQKYNSTAGQLKHVNQLKSDTIYIGQKLEIP 116
>gi|29378535|gb|AAO83969.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ +Q Q P + K P T V+ GDT+W L
Sbjct: 155 KKETTTQQAAPAAETKTEVQQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 214 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|422410988|ref|ZP_16487949.1| putative autolysin, partial [Listeria monocytogenes FSL F2-208]
gi|313606347|gb|EFR83277.1| putative autolysin [Listeria monocytogenes FSL F2-208]
Length = 73
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KLII
Sbjct: 21 NNPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLII 72
>gi|163791564|ref|ZP_02185967.1| autolysin [Carnobacterium sp. AT7]
gi|159873169|gb|EDP67270.1| autolysin [Carnobacterium sp. AT7]
Length = 1114
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%)
Query: 76 QQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYA 135
Q+ IV + T +P ++ ++ ++V DTLW +++KYG+S+ +K N L D I+
Sbjct: 1048 QKLIVKSTTTATAPVKPNTSNVKSHKVVSNDTLWDIAQKYGMSVSDLKAVNYLKSDVIFV 1107
Query: 136 GKKLII 141
G+ LII
Sbjct: 1108 GQSLII 1113
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S T + GDTL G++ K GVS+ +K++N L+ DTIY G+KLI+
Sbjct: 1007 SSSTYTVKSGDTLTGIASKNGVSVSDLKKSNNLTSDTIYVGQKLIV 1052
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 72 QPPPQQPIVTKPSICTEKSEPEP--ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLS 129
+ P PI P+ T S P S T + GDTL G++ KYGVS+ +K N L
Sbjct: 529 EQPQTNPI---PNENTNVSTPNTGNTSSSTYTVKSGDTLTGIASKYGVSVSDLKSWNNLK 585
Query: 130 GDTIYAGKKLII 141
D IY + L I
Sbjct: 586 TDMIYVNQGLTI 597
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S T + GDTL G++ KYGVS+ +K N L D IY + L I
Sbjct: 617 SSSTYTVKSGDTLTGIASKYGVSVSDLKSWNNLKTDMIYVNQGLTI 662
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S T + GDTL G++ KYGVS+ +K N L D IY + L I
Sbjct: 682 SSSTYTVKSGDTLTGIASKYGVSVSDLKSWNNLKTDMIYVNQGLTI 727
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S T + GDTL G++ K GVS+ +K N L D IY + L I
Sbjct: 877 SSSTYTVKSGDTLTGIASKNGVSVSDLKSWNNLKTDMIYVNQALTI 922
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S T + GDTL G++ K GVS+ +K N L D IY + L I
Sbjct: 747 SSSTYTVKSGDTLTGIALKNGVSVSDLKSWNNLKTDMIYVNQGLTI 792
>gi|187735323|ref|YP_001877435.1| Peptidoglycan-binding LysM [Akkermansia muciniphila ATCC BAA-835]
gi|187425375|gb|ACD04654.1| Peptidoglycan-binding LysM [Akkermansia muciniphila ATCC BAA-835]
Length = 164
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 22/105 (20%)
Query: 57 ETTQPQPIAESTQPIQPPPQQPIVTKPSIC-------------------TEKSEPEPASC 97
E+ P+ S+ PP +P VTK S + KS P+
Sbjct: 60 ESGHYSPVQSSSSYAYNPPAKPSVTKKSSARKSTAGSKSSRSTAARKSSSRKSAPK---A 116
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
RT + +GDTL ++R+ G S+ A+K ANGL D I+ +KL IP
Sbjct: 117 RTYTVKKGDTLGAIARRNGTSVKALKRANGLKSDLIHINQKLTIP 161
>gi|423458056|ref|ZP_17434853.1| hypothetical protein IEI_01196 [Bacillus cereus BAG5X2-1]
gi|401148440|gb|EJQ55933.1| hypothetical protein IEI_01196 [Bacillus cereus BAG5X2-1]
Length = 265
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C +S E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VC-HQSTAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDQTFIGEQLNIP 74
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 81 TKPSICTEKSEPEPASCRTVEIVR---GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGK 137
TK + T + +PA+ I + GD+L ++++Y V++ +IK+ N +G+ +Y G+
Sbjct: 77 TKSNEITVRQNVKPANISGQIIYQVQPGDSLETIAKRYNVTVQSIKQINNTAGNKLYTGQ 136
Query: 138 KLII 141
L I
Sbjct: 137 HLKI 140
>gi|294499951|ref|YP_003563651.1| Spore cortex-lytic enzyme [Bacillus megaterium QM B1551]
gi|295705335|ref|YP_003598410.1| spore cortex-lytic protein [Bacillus megaterium DSM 319]
gi|384046156|ref|YP_005494173.1| cell wall hydrolase SleB [Bacillus megaterium WSH-002]
gi|294349888|gb|ADE70217.1| Spore cortex-lytic enzyme precursor [Bacillus megaterium QM B1551]
gi|294802994|gb|ADF40060.1| spore cortex-lytic enzyme [Bacillus megaterium DSM 319]
gi|345443847|gb|AEN88864.1| Cell wall hydrolase SleB [Bacillus megaterium WSH-002]
Length = 268
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
S+ ++ + ++V+GDTLWGL ++ GV++D +K AN D IY G+ L IP
Sbjct: 22 SQGTASAAASHKVVKGDTLWGLGQQNGVTVDELKGANNRQNDMIYVGETLTIP 74
>gi|333979254|ref|YP_004517199.1| NLP/P60 protein [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822735|gb|AEG15398.1| NLP/P60 protein [Desulfotomaculum kuznetsovii DSM 6115]
Length = 288
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 34/41 (82%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+V G+TL+ LSR+YG++++A++ ANGL+G IY G+ LIIP
Sbjct: 40 VVAGETLYELSRRYGITVEALQAANGLNGHLIYPGQTLIIP 80
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
GI + L+A N LN + I I P P + + ++ T + A+
Sbjct: 54 GITVEALQAANGLNGHL--------IYPGQTLIIPGPAKAQPARNTVVTSNNTRAGANRY 105
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
TV GD+L+G++++YGV + A+K+AN L+ D I+ G+ LIIP
Sbjct: 106 TVR--PGDSLYGIAQRYGVGVQALKQANNLASDLIFPGQVLIIP 147
>gi|423522406|ref|ZP_17498879.1| hypothetical protein IGC_01789 [Bacillus cereus HuA4-10]
gi|401175100|gb|EJQ82303.1| hypothetical protein IGC_01789 [Bacillus cereus HuA4-10]
Length = 265
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C + + E ++ TV+ + DTLWG+S++YGVSI AIK+AN D + G++L IP
Sbjct: 20 VCNQGA-AEASTIHTVK--KNDTLWGISKQYGVSIQAIKQANNKGNDQAFIGEQLHIP 74
>gi|52079711|ref|YP_078502.1| peptidoglycan-binding protein [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319646488|ref|ZP_08000717.1| hypothetical protein HMPREF1012_01753 [Bacillus sp. BT1B_CT2]
gi|404488581|ref|YP_006712687.1| peptidoglycan hydrolase YocH [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423681693|ref|ZP_17656532.1| peptidoglycan-binding protein [Bacillus licheniformis WX-02]
gi|52002922|gb|AAU22864.1| Peptidoglycan-binding protein [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52347579|gb|AAU40213.1| putative peptidoglycan hydrolase YocH [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|317391076|gb|EFV71874.1| hypothetical protein HMPREF1012_01753 [Bacillus sp. BT1B_CT2]
gi|383438467|gb|EID46242.1| peptidoglycan-binding protein [Bacillus licheniformis WX-02]
Length = 244
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 35/47 (74%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + +E+ +GDTLWG+S+ YG+++ +K+ N LS D I+ G+KL I
Sbjct: 23 ASAKEIEVQKGDTLWGISQNYGMNLKDLKKWNQLSSDLIFPGQKLNI 69
>gi|442804626|ref|YP_007372775.1| putative cell wall hydrolase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740476|gb|AGC68165.1| putative cell wall hydrolase [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 255
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 38/49 (77%), Gaps = 2/49 (4%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA+ TV+ +GD+L+ +++KYG+++ A+++ANG D IY G+KLIIP
Sbjct: 69 PATVYTVQ--KGDSLYLIAKKYGITLSALRKANGKWDDMIYVGQKLIIP 115
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P A+ T +V+GD+L+ L + +G + + NGL IY G+KL +P
Sbjct: 19 PTFANAATYTVVKGDSLYTLGQLFGTTSGTLMTRNGLKSTVIYPGQKLEVP 69
>gi|194016984|ref|ZP_03055597.1| cell wall protein [Bacillus pumilus ATCC 7061]
gi|194011590|gb|EDW21159.1| cell wall protein [Bacillus pumilus ATCC 7061]
Length = 263
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 79 IVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKK 138
+V +I T + AS + + + +GDTLWG+S+K VS+ +K N LS D IY G K
Sbjct: 8 LVAVAAISTTAFGAQQASAKEITVQKGDTLWGISQKNDVSLKDLKGWNNLSTDMIYVGDK 67
Query: 139 LII 141
L I
Sbjct: 68 LTI 70
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
++ +GD+LW +++K+ VSI IK N L+ D I G L
Sbjct: 81 KVQKGDSLWKIAQKFNVSISDIKSWNNLNSDIIMVGSTL 119
>gi|157692620|ref|YP_001487082.1| cell wall protein [Bacillus pumilus SAFR-032]
gi|157681378|gb|ABV62522.1| cell wall protein [Bacillus pumilus SAFR-032]
Length = 263
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 79 IVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKK 138
+V +I T + AS + + + +GDTLWG+S+K VS+ +K N LS D IY G K
Sbjct: 8 LVAVAAISTTAFGAQQASAKEITVQKGDTLWGISQKNDVSLKDLKGWNNLSTDMIYVGDK 67
Query: 139 LII 141
L I
Sbjct: 68 LTI 70
Score = 38.9 bits (89), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
++ +GD+LW +++K+ VSI IK N L+ D I G L
Sbjct: 81 KVQKGDSLWKIAQKFNVSISDIKSWNNLNSDIIMVGSTL 119
>gi|34014939|gb|AAQ56223.1| invasion-associated protein p60 [Listeria innocua]
Length = 469
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 66 ESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVE------------IVRGDTLWGLSR 113
E+TQ ++P + K + T+++ P P + T E + GDT+W LS
Sbjct: 156 ETTQQVKPATEAKTEVKQT-TTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALSV 214
Query: 114 KYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 215 KYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|229061364|ref|ZP_04198711.1| Cell wall hydrolase [Bacillus cereus AH603]
gi|228717979|gb|EEL69624.1| Cell wall hydrolase [Bacillus cereus AH603]
Length = 270
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C + + E ++ TV+ + DTLWG+S++YGVSI AIK+AN D + G++L IP
Sbjct: 25 VCNQGA-AEASTIHTVK--KNDTLWGISKQYGVSIQAIKQANNKGNDQAFIGEQLHIP 79
>gi|347014907|gb|AEO72007.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 478
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P+AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPVAETKTEVKQTTQ-ATTPAPKVAETKETPVIDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|386042909|ref|YP_005961714.1| invasion associated secreted endopeptidase [Listeria monocytogenes
10403S]
gi|66737334|gb|AAY54613.1| Iap [Listeria monocytogenes]
gi|345536143|gb|AEO05583.1| invasion associated secreted endopeptidase [Listeria monocytogenes
10403S]
Length = 476
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P+AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 154 KKETTTQQAAPVAETKTEVKQTTQ-ATTPAPKVAETKETPVIDQNATTHAVKSGDTIWAL 212
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 213 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
>gi|30314067|gb|AAO47059.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314087|gb|AAO47069.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 229
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P+AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 105 KKETTTQQAAPVAETKTEVKQTTQ-ATTPAPKVAETKETPVIDQNATTHAVKSGDTIWAL 163
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 164 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 193
>gi|257875220|ref|ZP_05654873.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus
EC20]
gi|257809386|gb|EEV38206.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus
EC20]
Length = 632
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%)
Query: 88 EKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+++ ++ T + GDTLWG+SR+YGV+++ + + N LSG I G++L++
Sbjct: 577 QETNASSSNSTTYTVRSGDTLWGISRRYGVTVNQLMQWNNLSGSLILVGQRLVV 630
>gi|404409814|ref|YP_006695402.1| cell wall hydrolases A [Listeria monocytogenes SLCC5850]
gi|149657|gb|AAA25280.1| p60-related protein [Listeria monocytogenes]
gi|404229640|emb|CBY51044.1| cell wall hydrolases A, LysM domain [Listeria monocytogenes
SLCC5850]
Length = 478
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P+AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPVAETKTEVKQTTQ-ATTPAPKVAETKETPVIDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|251788129|ref|YP_003002850.1| cell wall hydrolase/autolysin [Dickeya zeae Ech1591]
gi|247536750|gb|ACT05371.1| cell wall hydrolase/autolysin [Dickeya zeae Ech1591]
Length = 560
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 10/83 (12%)
Query: 68 TQPIQPPPQQ---PIVTKPSICTEKSEPEPASCRTVEIVR-----GDTLWGLSRKYGVSI 119
T P+Q P+Q P+ P + + EPA T +R G+TL G++ +YGVS+
Sbjct: 401 THPLQNVPKQENRPLA--PQTVKQTTTAEPAQIATGTTLRHTVATGETLSGIATRYGVSM 458
Query: 120 DAIKEANGLSGDTIYAGKKLIIP 142
DAI+E N L D ++ G++L IP
Sbjct: 459 DAIREINRLKKDVVWVGQRLKIP 481
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++VRGDTL ++ +YGVS+ AI++AN LS T+ G+ LIIP
Sbjct: 517 KVVRGDTLSDIAARYGVSMKAIQQANNLSSGTVQLGQTLIIP 558
>gi|228996331|ref|ZP_04155975.1| Cell wall hydrolase [Bacillus mycoides Rock3-17]
gi|228763435|gb|EEM12338.1| Cell wall hydrolase [Bacillus mycoides Rock3-17]
Length = 265
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ + + A+ TV+ + DTLW LS YGVS+ AIK+AN + D IY G++L IP
Sbjct: 18 TLVSNQGTANAATVYTVK--KNDTLWDLSTHYGVSLQAIKQANHKTNDRIYIGEQLTIP 74
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 4/51 (7%)
Query: 95 ASCRTVEIV----RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + +IV RGDTL ++++Y VSI +I++AN +GD IYAG+ LII
Sbjct: 90 ASNHSAQIVYQVQRGDTLEAIAKRYNVSIQSIRQANNTNGDRIYAGQHLII 140
>gi|52550795|gb|AAU84443.1| invasion-associated protein p60 [Listeria innocua]
Length = 475
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 15/91 (16%)
Query: 66 ESTQPIQPPPQQPIVTKPSI---CTEKSEPEPASCRTVE------------IVRGDTLWG 110
E+TQ ++P + K + T+++ P P + T E + GDT+W
Sbjct: 156 ETTQQVKPATEAKTEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWA 215
Query: 111 LSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
LS KYGVS+ I N LS +IY G+KL I
Sbjct: 216 LSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 246
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 22 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|389574082|ref|ZP_10164151.1| cell wall protein [Bacillus sp. M 2-6]
gi|388426271|gb|EIL84087.1| cell wall protein [Bacillus sp. M 2-6]
Length = 263
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 79 IVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKK 138
+V +I T + AS + + + +GDTLWG+S+K VS+ +K N LS D IY G K
Sbjct: 8 LVAVAAISTTALGAQQASAKEITVQKGDTLWGISQKNDVSLKDLKGWNNLSTDMIYVGDK 67
Query: 139 LII 141
L I
Sbjct: 68 LTI 70
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
++ +GD+LW +++K+ VSI IK N L+ D I G L
Sbjct: 81 KVQKGDSLWKIAQKFNVSISDIKSWNNLNSDIIMIGSTL 119
>gi|229174426|ref|ZP_04301958.1| Cell wall hydrolase [Bacillus cereus MM3]
gi|228608986|gb|EEK66276.1| Cell wall hydrolase [Bacillus cereus MM3]
Length = 267
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C +S E ++ TV+ + DTLWG+S++YG+SI +IK+AN D + G++L IP
Sbjct: 20 VC-HQSTAEASTIHTVK--KNDTLWGISKQYGISIQSIKQANNKGNDQTFIGEQLNIP 74
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 88 EKSEPEPASCR---TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ ++P+PA+ ++ +GD+L +++ Y V++ +IK+ N +G+ +Y G+ L I
Sbjct: 86 QNAKPKPANISRQIIYQVQQGDSLETIAKHYNVTVQSIKQINNTAGNKLYTGQHLKI 142
>gi|229084243|ref|ZP_04216526.1| Cell wall hydrolase [Bacillus cereus Rock3-44]
gi|228699043|gb|EEL51745.1| Cell wall hydrolase [Bacillus cereus Rock3-44]
Length = 265
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ + + + A+ TV + DTLW LS YGVS+ AIK+AN + D IY G++L IP
Sbjct: 18 TLVSNQGVADAATIHTVN--KNDTLWDLSTLYGVSVQAIKQANHKTNDRIYIGEQLTIP 74
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Query: 84 SICTEKSEPEP------ASCRTV-EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
S T +S P+ S +TV ++ +GDTL ++ +Y VSI AIK+AN +GD IY G
Sbjct: 76 SYSTNESTPQKDIAASNHSAQTVYQVQQGDTLGAIAERYNVSIQAIKQANHTNGDRIYTG 135
Query: 137 KKLII 141
+ LII
Sbjct: 136 QHLII 140
>gi|295705109|ref|YP_003598184.1| LysM domain-containing protein [Bacillus megaterium DSM 319]
gi|294802768|gb|ADF39834.1| LysM domain protein [Bacillus megaterium DSM 319]
Length = 333
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ +G+TLW +S++YGV++D IKE NGL D IY G++L I
Sbjct: 78 THKVQQGNTLWSISQQYGVTVDQIKEWNGLKSDLIYPGEQLKI 120
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 30/41 (73%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T + +GDTLW +++K+ VS+D +K+AN L+ + IY ++L
Sbjct: 29 TYHVEKGDTLWKVAQKHSVSVDELKDANNLTSNIIYPNQEL 69
>gi|227511654|ref|ZP_03941703.1| peptidoglycan-binding protein [Lactobacillus buchneri ATCC 11577]
gi|227523857|ref|ZP_03953906.1| peptidoglycan-binding protein [Lactobacillus hilgardii ATCC 8290]
gi|227085148|gb|EEI20460.1| peptidoglycan-binding protein [Lactobacillus buchneri ATCC 11577]
gi|227088980|gb|EEI24292.1| peptidoglycan-binding protein [Lactobacillus hilgardii ATCC 8290]
Length = 196
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT-IYAGKKLIIP 142
V I GDT+WGLS+KY VS+DAI +AN LS + I AG+K+ IP
Sbjct: 26 VTIQSGDTVWGLSQKYNVSVDAINQANNLSNSSVIIAGEKINIP 69
>gi|365851422|ref|ZP_09391856.1| LysM domain protein [Lactobacillus parafarraginis F0439]
gi|363716871|gb|EHM00263.1| LysM domain protein [Lactobacillus parafarraginis F0439]
Length = 207
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 36/50 (72%), Gaps = 2/50 (4%)
Query: 95 ASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
AS TV V+ GDT+WGLS+KY VSIDAI +AN L S + I G++L IP
Sbjct: 20 ASASTVVTVQSGDTVWGLSQKYNVSIDAINQANNLNSSNVIVVGEQLNIP 69
>gi|384046390|ref|YP_005494407.1| hypothetical protein BMWSH_2216 [Bacillus megaterium WSH-002]
gi|345444081|gb|AEN89098.1| 3D domain protein [Bacillus megaterium WSH-002]
Length = 286
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 34/43 (79%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ +G+TLW +S++YGV++D IKE NGL+ D IY G++L I
Sbjct: 78 THKVQQGNTLWSISQQYGVTVDQIKEWNGLTSDLIYPGEQLKI 120
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 30/41 (73%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T + +GDTLW +++K+ VS+D +K+AN L+ + IY ++L
Sbjct: 29 TYHVEKGDTLWKVAQKHSVSVDELKDANNLTSNIIYPNQEL 69
>gi|395214035|ref|ZP_10400416.1| lytic transglycosylase [Pontibacter sp. BAB1700]
gi|394456483|gb|EJF10777.1| lytic transglycosylase [Pontibacter sp. BAB1700]
Length = 503
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 69 QPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
+ I PP + P++ + E S+ V + RGD L+G++RKYGVSI+ +KE N L
Sbjct: 347 KHIAPPAESPVMLASTSALEASKDSLVQATYV-VQRGDNLFGIARKYGVSIEDLKEWNKL 405
Query: 129 SGDTIYAGKKLII 141
G +I KL++
Sbjct: 406 DGSSIRVQDKLLV 418
>gi|29378451|gb|AAO83927.1| invasion associated protein p60 [Listeria innocua]
Length = 469
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ I N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDIMSWNNLSPSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|423448267|ref|ZP_17425146.1| hypothetical protein IEC_02875 [Bacillus cereus BAG5O-1]
gi|423540808|ref|ZP_17517199.1| hypothetical protein IGK_02900 [Bacillus cereus HuB4-10]
gi|401128861|gb|EJQ36544.1| hypothetical protein IEC_02875 [Bacillus cereus BAG5O-1]
gi|401171996|gb|EJQ79217.1| hypothetical protein IGK_02900 [Bacillus cereus HuB4-10]
Length = 323
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C + S E ++ TV+ + DTLWG+S++YGVSI IK+AN D + G++L IP
Sbjct: 78 VCNQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQTIKQANNKGNDQAFIGEQLHIP 132
>gi|407979053|ref|ZP_11159876.1| cell wall protein [Bacillus sp. HYC-10]
gi|407414379|gb|EKF36029.1| cell wall protein [Bacillus sp. HYC-10]
Length = 263
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 79 IVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKK 138
+V +I T + AS + + + +GDTLWG+S+K VS+ +K N LS D IY G K
Sbjct: 8 LVAVAAISTTALGAQQASAKEITVKKGDTLWGISQKNDVSLKDLKGWNNLSTDMIYVGDK 67
Query: 139 LII 141
L I
Sbjct: 68 LTI 70
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
E+ +GD+LW +++K+ VSI +K N L+ D I G L
Sbjct: 81 EVQKGDSLWKIAQKFNVSISDLKSWNNLNSDIILIGSTL 119
>gi|422349975|ref|ZP_16430863.1| hypothetical protein HMPREF9465_01753 [Sutterella wadsworthensis
2_1_59BFAA]
gi|404657824|gb|EKB30706.1| hypothetical protein HMPREF9465_01753 [Sutterella wadsworthensis
2_1_59BFAA]
Length = 716
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 54/103 (52%), Gaps = 11/103 (10%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+++ LK N L N Q I ++P P Q PS E PE R
Sbjct: 558 VSVVRLKRANRLTGNALRVGQRLEIPTGSEPKAPAVQ------PSRADE--SPEAGLYR- 608
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ GDTL+ ++ ++GVS++A+K NGLSG ++ AG+KL+IP
Sbjct: 609 --VKSGDTLYEIAGRFGVSVNALKAVNGLSGSSLRAGQKLVIP 649
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
G+TL +SR+YGVS ++ N +SG+TI AG++L IP
Sbjct: 491 GETLGSISRRYGVSTAILRATNRISGNTIRAGQRLRIP 528
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E + R + +GDTL ++ Y VS+ +K AN L+G+ + G++L IP
Sbjct: 534 EESDVRVHTVRKGDTLSEIADHYDVSVVRLKRANRLTGNALRVGQRLEIP 583
Score = 35.0 bits (79), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G++++ LKA+N L+ + Q I + + T+PS + +
Sbjct: 623 GVSVNALKAVNGLSGSSLRAGQKLVIPATAK-----------TQPSRADSQPAGSAQAQD 671
Query: 99 TVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
TV V+ GDTL ++ ++G S+ +K+ NGL + + G+++ +P
Sbjct: 672 TVYRVKSGDTLSSIASRFGTSVRILKDLNGLRSNRLSVGQRIRLP 716
>gi|196038339|ref|ZP_03105648.1| putative cell wall hydrolase [Bacillus cereus NVH0597-99]
gi|196030747|gb|EDX69345.1| putative cell wall hydrolase [Bacillus cereus NVH0597-99]
Length = 265
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 40/58 (68%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S + ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAQASTIHTVK--KNDTLWGISKQYGVSIQSIKQANHKGNDQTFIGEQLHIP 74
>gi|452855844|ref|YP_007497527.1| putative exported cell wall-binding protein [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452080104|emb|CCP21865.1| putative exported cell wall-binding protein [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 289
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + + + +GDTLWG+S+K GV++ +KE N LS D I G+KL I
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNQLSSDLIIEGEKLTI 69
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S E + + +GD+LW +++K+G S+ +K N L D IYAG L
Sbjct: 70 SSVETTTSGQYTVKQGDSLWKIAQKFGTSVGNLKSLNNLQSDIIYAGTTL 119
>gi|29378409|gb|AAO83906.1| invasion associated protein p60 [Listeria innocua]
Length = 471
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYGVS+ N LS +IY G+KL I
Sbjct: 214 VKYGVSVQDYMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|83318892|emb|CAJ01899.1| P60 protein [Listeria monocytogenes]
gi|114150004|gb|ABI51620.1| P60 protein [Listeria monocytogenes]
Length = 374
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 20 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 148 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 206
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T+W LS KYGVS+ I N LS +IY G+KL I
Sbjct: 207 TIWALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 241
>gi|441470167|emb|CCQ19922.1| Probable endopeptidase p60 [Listeria monocytogenes]
Length = 327
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 20 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 154 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 212
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 213 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
>gi|390934724|ref|YP_006392229.1| cell wall hydrolase SleB [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
gi|389570225|gb|AFK86630.1| cell wall hydrolase SleB [Thermoanaerobacterium saccharolyticum
JW/SL-YS485]
Length = 274
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P S T + +GD+L+ ++ KYG+++DA+K NGL+GD IY G+ +I
Sbjct: 72 PGSDNTYTVQKGDSLYLIATKYGITVDALKNVNGLTGDMIYPGQVFVI 119
>gi|168002860|ref|XP_001754131.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694685|gb|EDQ81032.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 467
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANG-LSGDTIYAGKKLIIP 142
+ V I +GDTLWGLSRKY VS++++K ANG + GD + AG + IP
Sbjct: 323 KQVTIQKGDTLWGLSRKYNVSVESLKAANGIIVGDALDAGDIITIP 368
>gi|295703401|ref|YP_003596476.1| spore cortex-lytic protein [Bacillus megaterium DSM 319]
gi|294801060|gb|ADF38126.1| spore cortex-lytic enzyme [Bacillus megaterium DSM 319]
Length = 234
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++V+GD+LW L ++Y V+ID IK+ N GD IY G+ L IP
Sbjct: 33 KVVKGDSLWKLGKRYSVTIDDIKKLNNRQGDMIYIGETLAIP 74
>gi|227539279|ref|ZP_03969328.1| hemagglutinin [Sphingobacterium spiritivorum ATCC 33300]
gi|227240961|gb|EEI90976.1| hemagglutinin [Sphingobacterium spiritivorum ATCC 33300]
Length = 281
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 30 KTAGFVV---FSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSIC 86
K+AG+ ++ + I +++ +R+ET + E + + +Q IV +P+
Sbjct: 167 KSAGYATNPRYAELLIDMIERYELYRYDRSETYVEKEKRE--EVVDKVIEQRIVQEPAAV 224
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ P + R E+ +TL+ LS+ Y VSI+ IK+ NGL+ D + G+ L+I
Sbjct: 225 VPEQIKSPVAMRIHEVKAKETLYALSKMYNVSIEQIKQLNGLTADDVSIGQLLVI 279
>gi|408356326|ref|YP_006844857.1| hypothetical protein AXY_09630 [Amphibacillus xylanus NBRC 15112]
gi|407727097|dbj|BAM47095.1| hypothetical protein AXY_09630 [Amphibacillus xylanus NBRC 15112]
Length = 538
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P + TV+ GD L L+++YGV++D+IKEAN LS D + G+KLIIP
Sbjct: 149 PKAYHTVQT--GDYLSVLAKRYGVTVDSIKEANNLSSDLVRLGQKLIIP 195
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G+ + +K N L+ + Q I P Q + +P E++E
Sbjct: 169 GVTVDSIKEANNLSSDLVRLGQKLIIPTLVNDTAAPAQTEQIQQP----EQAEQTEQKAT 224
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T +V GD+L+ +++K+G +IDAIK AN L + G+KL IP
Sbjct: 225 TYTVVSGDSLFLIAQKFGTTIDAIKSANKLDSVVLQIGQKLTIP 268
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ GDTLW ++ ++G +I I++AN L D I + LIIP
Sbjct: 108 QVKSGDTLWKIANRFGSTIANIRQANQLKSDLIKVNQSLIIP 149
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 16/103 (15%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G I +K+ N L+ + Q I + Q Q Q+ T+PS T K+
Sbjct: 242 GTTIDAIKSANKLDSVVLQIGQKLTIPGAQQQSQEINQEQ--TRPSRYTVKA-------- 291
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL +++++ V++ A+K N L+ D I G+ LII
Sbjct: 292 ------GDTLSAIAKRFNVTVSALKSNNNLNSDLIRVGQVLII 328
>gi|149180479|ref|ZP_01858983.1| hypothetical protein BSG1_16020 [Bacillus sp. SG-1]
gi|148851632|gb|EDL65778.1| hypothetical protein BSG1_16020 [Bacillus sp. SG-1]
Length = 275
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 89 KSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
K E +S T + GD+LWG+++ YGVS+D +K +N L+ + I+ G+KL I
Sbjct: 63 KQELRVSSTETYTVESGDSLWGIAKYYGVSVDELKNSNSLTSNIIHPGQKLTI 115
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS VE+ +GDTLWGLS++YG S++ + + N L+ D I+ ++L
Sbjct: 22 ASAEKVEVKKGDTLWGLSKEYGTSVENLLKWNNLNSDLIFPKQEL 66
>gi|333979249|ref|YP_004517194.1| cell wall hydrolase SleB [Desulfotomaculum kuznetsovii DSM 6115]
gi|333822730|gb|AEG15393.1| cell wall hydrolase SleB [Desulfotomaculum kuznetsovii DSM 6115]
Length = 271
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 29/38 (76%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL+ + +YGVS +IK ANGL DTIY G+KLIIP
Sbjct: 89 GDTLYLIGLRYGVSFQSIKAANGLGSDTIYPGQKLIIP 126
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
A+ T + G++L+ +SR YG ++DA++ ANGL D IY G++L IP
Sbjct: 26 AAAATHTVSPGESLFLISRAYGTTVDALRRANGLYTDLIYPGQQLYIP 73
>gi|317130884|ref|YP_004097166.1| glycoside hydrolase family protein [Bacillus cellulosilyticus DSM
2522]
gi|315475832|gb|ADU32435.1| glycoside hydrolase family 18 [Bacillus cellulosilyticus DSM 2522]
Length = 1328
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 88 EKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ +E E A T +V GD+L+ ++ +Y +I+ +K AN L+GD I+ G+ L+IP
Sbjct: 1274 DATETEKAMTTTYTVVAGDSLYRIALRYNTTINELKAANNLTGDMIFVGQTLVIP 1328
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 67 STQPIQPPPQQPIVTKPS-ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEA 125
S+ + P T PS I TE E TV+ RGD+L ++R + +++ A+K+A
Sbjct: 71 SSIYLHATPSDAHATTPSQISTE----EKYDVYTVK--RGDSLSVIARDHDITVQALKDA 124
Query: 126 NGLSGDTIYAGKKLIIP 142
NGL D I+ G++L +P
Sbjct: 125 NGLKSDIIFIGQQLKLP 141
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E + + +V GD+L ++++YG S+DAI+ N L+ D I G+ L IP
Sbjct: 351 ETQNTISYTVVSGDSLSVIAKRYGTSVDAIRTLNNLTSDLIRVGQVLHIP 400
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 7/58 (12%)
Query: 91 EPEPASCRTVE------IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
EP+P TVE +V GD+L +++++ +IDA++ N LS D I G+ L+IP
Sbjct: 197 EPQPIKA-TVEPTFTYVVVPGDSLSVIAKRFHTTIDALRTLNHLSSDIIRVGQTLVIP 253
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 30/44 (68%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T +++GD+L+ ++R + V++D I N L+ D I+ G+KL +P
Sbjct: 144 TYTVLQGDSLFTIARHFQVTVDDIIATNRLTSDRIFPGQKLRLP 187
>gi|384044321|ref|YP_005492338.1| endopeptidase lytE [Bacillus megaterium WSH-002]
gi|345442012|gb|AEN87029.1| putative endopeptidase lytE [Bacillus megaterium WSH-002]
Length = 348
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
AS TV++ GDTLW LS KY +++A+K N LS +TI G+ L IP
Sbjct: 26 ASASTVQVKAGDTLWSLSTKYHTTVEALKSVNKLSSNTIRVGQTLSIP 73
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 16/102 (15%)
Query: 42 ISILKALNPLNKN--RNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+ LK++N L+ N R T P A ++QP KPS PA+ T
Sbjct: 50 VEALKSVNKLSSNTIRVGQTLSIPSASTSQPSNKEE------KPS--------APATGST 95
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ GDTLW ++ ++ +S++ +K N LS + IY + L +
Sbjct: 96 YKVQSGDTLWKVATRFNMSVEELKRLNALSSNIIYINQTLKV 137
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+++ LK LN L+ N Q + S P +P T P + T
Sbjct: 113 MSVEELKRLNALSSNIIYINQTLKVNGSNSASTPTTSKPAET----------PSKDANGT 162
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ RGD+L ++ + +S+ +K+ NGL+ +TIY ++L +
Sbjct: 163 YKVQRGDSLSKIASTFHMSVSELKQINGLTSNTIYVNQQLKV 204
>gi|294499721|ref|YP_003563421.1| LysM domain-containing protein [Bacillus megaterium QM B1551]
gi|294349658|gb|ADE69987.1| LysM domain protein [Bacillus megaterium QM B1551]
Length = 357
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ +G+TLW +S++YGV++D IKE NGL D IY G++L I
Sbjct: 78 THKVQQGNTLWSISQQYGVTVDQIKEWNGLKSDLIYPGEQLKI 120
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 30/41 (73%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T + +GDTLW +++K+ VS+D +K+AN L+ + IY ++L
Sbjct: 29 TYHVEKGDTLWKVAQKHSVSVDELKDANNLTSNIIYPNQEL 69
>gi|294498051|ref|YP_003561751.1| spore cortex-lytic enzyme [Bacillus megaterium QM B1551]
gi|294347988|gb|ADE68317.1| spore cortex-lytic enzyme [Bacillus megaterium QM B1551]
Length = 233
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++V+GD+LW L ++Y V+ID IK+ N GD IY G+ L IP
Sbjct: 33 KVVKGDSLWKLGKRYSVTIDDIKKINNRQGDMIYIGETLAIP 74
>gi|255030333|ref|ZP_05302284.1| invasion associated secreted endopeptidase [Listeria monocytogenes
LO28]
Length = 70
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 67
>gi|154686328|ref|YP_001421489.1| hypothetical protein RBAM_018960 [Bacillus amyloliquefaciens FZB42]
gi|154352179|gb|ABS74258.1| YocH [Bacillus amyloliquefaciens FZB42]
Length = 289
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + + + +GDTLWG+S+K GV++ +KE N LS D I G+KL I
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNQLSSDLIIEGEKLTI 69
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S E + + +GD+LW +++K+G S+ +K N L D IYAG L
Sbjct: 70 SSVETTTSGQYTVKQGDSLWKIAQKFGTSVGNLKSLNNLQSDIIYAGTTL 119
>gi|385265046|ref|ZP_10043133.1| LysM domain-containing protein [Bacillus sp. 5B6]
gi|385149542|gb|EIF13479.1| LysM domain-containing protein [Bacillus sp. 5B6]
Length = 289
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + + + +GDTLWG+S+K GV++ +KE N LS D I G+KL I
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNQLSSDLIIEGEKLTI 69
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S E + + +GD+LW +++K+G S+ +K N L D IYAG L
Sbjct: 70 SSVETTTTGQYTVKQGDSLWKIAQKFGTSVGNLKSLNNLQSDIIYAGTTL 119
>gi|423558682|ref|ZP_17534984.1| hypothetical protein II3_03886 [Bacillus cereus MC67]
gi|401190936|gb|EJQ97972.1| hypothetical protein II3_03886 [Bacillus cereus MC67]
Length = 265
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
IC + + E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 ICNQGA-AEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDQTFIGEQLNIP 74
>gi|319406051|emb|CBI79681.1| LysM/M23 peptidase domain protein [Bartonella sp. AR 15-3]
Length = 373
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 94 PASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P S R IV+ GDTL ++++ GVS+D ++ ANG++G++IY G+ LIIP
Sbjct: 110 PVSKRNSYIVQSGDTLLSIAQQLGVSVDTLRLANGINGNSIYIGQSLIIP 159
>gi|384265647|ref|YP_005421354.1| hypothetical protein BANAU_2017 [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387898640|ref|YP_006328936.1| hypothetical protein MUS_2265 [Bacillus amyloliquefaciens Y2]
gi|394991694|ref|ZP_10384494.1| YocH [Bacillus sp. 916]
gi|429505462|ref|YP_007186646.1| hypothetical protein B938_09800 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|380499000|emb|CCG50038.1| putative protein yocH [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|387172750|gb|AFJ62211.1| conserved hypothetical protein YocH [Bacillus amyloliquefaciens Y2]
gi|393807523|gb|EJD68842.1| YocH [Bacillus sp. 916]
gi|429487052|gb|AFZ90976.1| hypothetical protein B938_09800 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 289
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + + + +GDTLWG+S+K GV++ +KE N LS D I G+KL I
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNQLSSDLIIEGEKLTI 69
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S E + + +GD+LW +++K+G S+ +K N L D IYAG L
Sbjct: 70 SSVETTTSGQYTVKQGDSLWKIAQKFGTSVGNLKSLNNLQSDIIYAGTTL 119
>gi|307132707|ref|YP_003884723.1| N-acetylmuramoyl-l-alanine amidase II [Dickeya dadantii 3937]
gi|306530236|gb|ADN00167.1| N-acetylmuramoyl-l-alanine amidase II [Dickeya dadantii 3937]
Length = 558
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 8/115 (6%)
Query: 32 AGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPI----QPPPQQPIVTKPSICT 87
+G G+++S ++ N L K+ Q I P +P+ PS
Sbjct: 446 SGIAARYGVSMSAIRDANRLKKDVVWVGQRLKIPSGASPAVNIASATKSKPVAATPSSGE 505
Query: 88 EKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+KS A+ ++ RGDTL ++ +YGVS+ AI++AN +S T+ G+ LIIP
Sbjct: 506 KKS----ATVIKHKVTRGDTLSAIASRYGVSMKAIQQANNMSSGTVQLGQTLIIP 556
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 10/83 (12%)
Query: 68 TQPIQPPPQQ---PIVTKPSICTEKSEPEPASCRTVEIVR-----GDTLWGLSRKYGVSI 119
T P+Q P+Q P+ ++ + EPA T VR G+TL G++ +YGVS+
Sbjct: 399 THPLQNIPKQENRPLGSQ--TVKNAAATEPAQIATGATVRHTVATGETLSGIAARYGVSM 456
Query: 120 DAIKEANGLSGDTIYAGKKLIIP 142
AI++AN L D ++ G++L IP
Sbjct: 457 SAIRDANRLKKDVVWVGQRLKIP 479
>gi|228990237|ref|ZP_04150205.1| Cell wall hydrolase [Bacillus pseudomycoides DSM 12442]
gi|228769476|gb|EEM18071.1| Cell wall hydrolase [Bacillus pseudomycoides DSM 12442]
Length = 265
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 22/133 (16%)
Query: 17 NDGSGDGREAAVAK----TAGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQ 72
N G+ D K G + G+++ +K N +R + I P+
Sbjct: 22 NQGTADAATVYTVKKNDTLGGISIHYGVSVQAIKQANHKTNDRIYIGEQLTI-----PVS 76
Query: 73 PPPQQPIVTKPSICTEKSEPEPASCRTVEIV----RGDTLWGLSRKYGVSIDAIKEANGL 128
P + + + + AS + +IV RGDTL ++++Y VSI +I++AN
Sbjct: 77 PSSSE---------STQQKDVAASNHSAQIVYQVQRGDTLEAIAKRYNVSIQSIRQANNT 127
Query: 129 SGDTIYAGKKLII 141
+GD IYAG+ LII
Sbjct: 128 NGDRIYAGQHLII 140
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ + + + A+ TV+ + DTL G+S YGVS+ AIK+AN + D IY G++L IP
Sbjct: 18 TLVSNQGTADAATVYTVK--KNDTLGGISIHYGVSVQAIKQANHKTNDRIYIGEQLTIP 74
>gi|402556115|ref|YP_006597386.1| cell wall hydrolase [Bacillus cereus FRI-35]
gi|401797325|gb|AFQ11184.1| cell wall hydrolase [Bacillus cereus FRI-35]
Length = 265
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C+ S E ++ TV+ + DTLWG+S++YGVSI +IK+AN + + G++L IP
Sbjct: 20 VCSH-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNNQTFIGEQLHIP 74
>gi|163791518|ref|ZP_02185923.1| endolysin, putative [Carnobacterium sp. AT7]
gi|159873198|gb|EDP67297.1| endolysin, putative [Carnobacterium sp. AT7]
Length = 312
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 77 QPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+P+ +KP+ KS T +V+GDTLW +++KYG + IK NGL D I+AG
Sbjct: 167 KPVASKPAATPSKSNG------THTVVKGDTLWDIAQKYGTDVQTIKSLNGLKSDLIHAG 220
Query: 137 KKLII 141
KL I
Sbjct: 221 DKLNI 225
>gi|452976525|gb|EME76340.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS
[Bacillus sonorensis L12]
Length = 433
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA +T+++ GD+LW LS +Y SI A+K AN LS IY G+ L IP
Sbjct: 23 PAEAQTIKVKSGDSLWKLSTEYNTSISALKSANNLSSTVIYVGQTLEIP 71
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW ++ Y S+ IK+ NGLS D IY G+KL++
Sbjct: 93 TYTVKSGDSLWLIASDYKTSVQEIKKLNGLSSDMIYPGQKLVV 135
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW ++ V++ +I+EAN L D I G+KL I
Sbjct: 252 GDSLWKIANSMNVTVQSIREANNLKTDVIQVGQKLKI 288
>gi|20386522|gb|AAM21695.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386524|gb|AAM21696.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386526|gb|AAM21697.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 220
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 14 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 61
Score = 37.0 bits (84), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P+AE+ ++ Q P + K P T V+ GD
Sbjct: 143 PTQEVKKETTTQQAAPVAETKTEVKQTTQ-ATTPAPKVAETKETPVIDQNATTHAVKSGD 201
Query: 107 TLWGLSRKYGVSIDAI 122
T+W LS KYGVS+ I
Sbjct: 202 TIWALSVKYGVSVQDI 217
>gi|29378507|gb|AAO83955.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 150 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 208
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T+W LS KYGVS+ I N LS +IY G+KL I
Sbjct: 209 TIWALSVKYGVSVQDIMSWNNLSSSSIYVGRKLAI 243
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|302034295|gb|ADK92301.1| invasion associated protein [Listeria monocytogenes]
gi|302034297|gb|ADK92302.1| invasion associated protein [Listeria monocytogenes]
Length = 223
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 12 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 59
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 145 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 203
Query: 112 SRKYGVSIDAIKEANGLS 129
S KYGVS+ I N LS
Sbjct: 204 SVKYGVSVQDIMSWNNLS 221
>gi|302034287|gb|ADK92297.1| invasion associated protein [Listeria monocytogenes]
gi|302034289|gb|ADK92298.1| invasion associated protein [Listeria monocytogenes]
gi|302034291|gb|ADK92299.1| invasion associated protein [Listeria monocytogenes]
gi|302034293|gb|ADK92300.1| invasion associated protein [Listeria monocytogenes]
gi|302034299|gb|ADK92303.1| invasion associated protein [Listeria monocytogenes]
gi|302034301|gb|ADK92304.1| invasion associated protein [Listeria monocytogenes]
gi|302034303|gb|ADK92305.1| invasion associated protein [Listeria monocytogenes]
gi|302034305|gb|ADK92306.1| invasion associated protein [Listeria monocytogenes]
Length = 224
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 12 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 59
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P+AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 146 KKETTTQQAAPVAETKTEVKQTTQ-ATTPAPKVAETKETPVIDQNATTHAVKSGDTIWAL 204
Query: 112 SRKYGVSIDAIKEANGLS 129
S KYGVS+ I N LS
Sbjct: 205 SVKYGVSVQDIMSWNNLS 222
>gi|401555505|gb|AFP94028.1| invasion associated protein, partial [Listeria monocytogenes]
Length = 215
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 6 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 53
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 134 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 192
Query: 107 TLWGLSRKYGVSIDAIKEANGLS 129
T+W LS KYGVS+ I N LS
Sbjct: 193 TIWALSVKYGVSVQDIMSWNNLS 215
>gi|320119735|gb|ADW15966.1| invasion associated protein [Listeria monocytogenes]
Length = 216
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 5 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 52
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 133 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 191
Query: 107 TLWGLSRKYGVSIDAIKEANGLS 129
T+W LS KYGVS+ I N LS
Sbjct: 192 TIWALSVKYGVSVQDIMSWNNLS 214
>gi|20386502|gb|AAM21685.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386504|gb|AAM21686.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386506|gb|AAM21687.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386512|gb|AAM21690.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386514|gb|AAM21691.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386516|gb|AAM21692.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 219
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 14 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 61
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 142 PTQEVKKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 200
Query: 107 TLWGLSRKYGVSIDAI 122
T+W LS KYGVS+ I
Sbjct: 201 TIWALSVKYGVSVQDI 216
>gi|320119741|gb|ADW15969.1| invasion associated protein [Listeria monocytogenes]
Length = 217
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 5 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 52
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 139 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 197
Query: 112 SRKYGVSIDAIKEANGLS 129
S KYGVS+ I N LS
Sbjct: 198 SVKYGVSVQDIMSWNNLS 215
>gi|401555553|gb|AFP94052.1| invasion associated protein, partial [Listeria monocytogenes]
Length = 218
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 5 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 52
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 12/83 (14%)
Query: 59 TQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVE------------IVRGD 106
T Q + + Q P T+ T+ + P P + T E + GD
Sbjct: 135 TTTQEVKKEATTEQAAPAAETKTEVKQTTQATTPAPKAAETKETPVVDQNATTHTVKSGD 194
Query: 107 TLWGLSRKYGVSIDAIKEANGLS 129
T+W LS KYGVS+ I N LS
Sbjct: 195 TIWALSVKYGVSVQDIMSWNNLS 217
>gi|401555531|gb|AFP94041.1| invasion associated protein, partial [Listeria monocytogenes]
Length = 214
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 4 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 51
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 137 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 195
Query: 112 SRKYGVSIDAIKEANGLS 129
S KYGVS+ I N LS
Sbjct: 196 SVKYGVSVQDIMSWNNLS 213
>gi|320119745|gb|ADW15971.1| invasion associated protein [Listeria monocytogenes]
Length = 201
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 4 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 51
>gi|401555525|gb|AFP94038.1| invasion associated protein, partial [Listeria monocytogenes]
gi|401555529|gb|AFP94040.1| invasion associated protein, partial [Listeria monocytogenes]
gi|401555543|gb|AFP94047.1| invasion associated protein, partial [Listeria monocytogenes]
Length = 215
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 5 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 52
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 133 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 191
Query: 107 TLWGLSRKYGVSIDAIKEANGLS 129
T+W LS KYGVS+ I N LS
Sbjct: 192 TIWALSVKYGVSVQDIMSWNNLS 214
>gi|296330479|ref|ZP_06872958.1| putative exported cell wall-binding protein [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305674735|ref|YP_003866407.1| cell wall-binding protein [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296152376|gb|EFG93246.1| putative exported cell wall-binding protein [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305412979|gb|ADM38098.1| putative exported cell wall-binding protein [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 287
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS + + + +GDTLWG+S+K GV++ +KE N L+ D I AG+KL
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNKLTSDKIIAGEKL 67
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +++++G +++ +K N LS D IYAG L +
Sbjct: 82 IKAGDTLTKIAQQFGTTVNNLKVWNNLSSDMIYAGSTLSV 121
>gi|20386508|gb|AAM21688.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386510|gb|AAM21689.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 219
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 8 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 61
Score = 35.4 bits (80), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 142 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 200
Query: 107 TLWGLSRKYGVSIDAI 122
T+W LS KYGVS+ I
Sbjct: 201 TIWALSVKYGVSVQDI 216
>gi|20386518|gb|AAM21693.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|20386520|gb|AAM21694.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 220
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 14 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 61
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 143 PTQEVKKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 201
Query: 107 TLWGLSRKYGVSIDAI 122
T+W LS KYGVS+ I
Sbjct: 202 TIWALSVKYGVSVQDI 217
>gi|401555539|gb|AFP94045.1| invasion associated protein, partial [Listeria monocytogenes]
Length = 214
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 5 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 52
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 133 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 191
Query: 107 TLWGLSRKYGVSIDAIKEANGLS 129
T+W LS KYGVS+ I N LS
Sbjct: 192 TIWALSVKYGVSVQDIMSWNNLS 214
>gi|350266271|ref|YP_004877578.1| protein YocH [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349599158|gb|AEP86946.1| protein YocH [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 287
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS + + + +GDTLWG+S+K GV++ +KE N L+ D I AG+KL
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNKLTSDQIIAGEKL 67
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +++++G +++ +K N LS D IYAG L +
Sbjct: 82 IKAGDTLTKIAQQFGTTVNNLKVWNNLSSDMIYAGSTLSV 121
>gi|347014913|gb|AEO72010.1| invasion associated protein p60 [Listeria monocytogenes ATCC 19117]
Length = 477
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 33 GFVVFSGIAISILKA-LNPLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEK 89
GFV + + + + P + + ETT Q P AE+ ++ Q P + K
Sbjct: 132 GFVNGKYLTVKVASTPVAPTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETK 190
Query: 90 SEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P T V+ GDT+W LS KYGVS+ I N LS +IY G+KL I
Sbjct: 191 ETPVVDQNATTHAVKSGDTIWALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 69
>gi|29378487|gb|AAO83945.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 471
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 155 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 214 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 25 ASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|401555537|gb|AFP94044.1| invasion associated protein, partial [Listeria monocytogenes]
gi|401555541|gb|AFP94046.1| invasion associated protein, partial [Listeria monocytogenes]
Length = 214
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 5 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 52
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 138 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 196
Query: 112 SRKYGVSIDAIKEANGLS 129
S KYGVS+ I N LS
Sbjct: 197 SVKYGVSVQDIMSWNNLS 214
>gi|300770751|ref|ZP_07080630.1| family 4 N-acetylmuramoyl-L-alanine amidase [Sphingobacterium
spiritivorum ATCC 33861]
gi|300763227|gb|EFK60044.1| family 4 N-acetylmuramoyl-L-alanine amidase [Sphingobacterium
spiritivorum ATCC 33861]
Length = 281
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 60/115 (52%), Gaps = 5/115 (4%)
Query: 30 KTAGFVV---FSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSIC 86
K+AG+ ++ + I +++ +R+ET + E + + +Q IV +P+
Sbjct: 167 KSAGYATNPRYAELLIDMIERYELYRYDRSETYVEKEKRE--EVVDKVIEQRIVQEPAAV 224
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ P + R E+ +TL+ LS+ Y VS++ IK+ NGL+ D + G+ L+I
Sbjct: 225 VPEQIKSPVAMRIHEVKAKETLYALSKMYNVSVEQIKQLNGLTADDVSIGQLLVI 279
>gi|16078981|ref|NP_389802.1| cell wall-binding protein [Bacillus subtilis subsp. subtilis str.
168]
gi|221309819|ref|ZP_03591666.1| hypothetical protein Bsubs1_10601 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314141|ref|ZP_03595946.1| hypothetical protein BsubsN3_10532 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319063|ref|ZP_03600357.1| hypothetical protein BsubsJ_10448 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323337|ref|ZP_03604631.1| hypothetical protein BsubsS_10567 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|384175703|ref|YP_005557088.1| protein YocH [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|402776170|ref|YP_006630114.1| cell wall-binding protein [Bacillus subtilis QB928]
gi|418032896|ref|ZP_12671378.1| hypothetical protein BSSC8_23220 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|430758283|ref|YP_007209363.1| hypothetical protein A7A1_2791 [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|452916002|ref|ZP_21964627.1| cell wall-binding protein yocH [Bacillus subtilis MB73/2]
gi|73622096|sp|O34669.1|YOCH_BACSU RecName: Full=Cell wall-binding protein YocH; Flags: Precursor
gi|2619050|gb|AAB84474.1| YocH [Bacillus subtilis]
gi|2634314|emb|CAB13813.1| putative exported cell wall-binding protein [Bacillus subtilis
subsp. subtilis str. 168]
gi|349594927|gb|AEP91114.1| protein YocH [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|351470603|gb|EHA30737.1| hypothetical protein BSSC8_23220 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402481351|gb|AFQ57860.1| Putative exported cell wall-binding protein [Bacillus subtilis
QB928]
gi|407959344|dbj|BAM52584.1| exported cell wall-binding protein [Bacillus subtilis BEST7613]
gi|407964920|dbj|BAM58159.1| exported cell wall-binding protein [Bacillus subtilis BEST7003]
gi|430022803|gb|AGA23409.1| Hypothetical protein YocH [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|452115012|gb|EME05409.1| cell wall-binding protein yocH [Bacillus subtilis MB73/2]
Length = 287
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS + + + +GDTLWG+S+K GV++ +KE N L+ D I AG+KL
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNKLTSDKIIAGEKL 67
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +++K+G +++ +K N LS D IYAG L +
Sbjct: 82 IKAGDTLSKIAQKFGTTVNNLKVWNNLSSDMIYAGSTLSV 121
>gi|449094597|ref|YP_007427088.1| putative exported cell wall-binding protein [Bacillus subtilis
XF-1]
gi|449028512|gb|AGE63751.1| putative exported cell wall-binding protein [Bacillus subtilis
XF-1]
Length = 287
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS + + + +GDTLWG+S+K GV++ +KE N L+ D I AG+KL
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNKLTSDKIIAGEKL 67
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +++K+G +++ +K N LS D IYAG L +
Sbjct: 82 IKAGDTLSKIAQKFGTTVNNLKVWNNLSSDMIYAGSTLSV 121
>gi|66968500|gb|AAY59629.1| invasion associated protein p60 [Listeria seeligeri]
Length = 522
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 55 RNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSR 113
+ ETTQ P ++ ++ P K ++ T+ + P + T V+ GDT+W LS
Sbjct: 154 QEETTQAAPAQQTKTEVKQAAPAPTTEKEAVETKTTAPAVDTNATTHTVKTGDTIWALSV 213
Query: 114 KYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYG S+ + N LS +IY G+ + +
Sbjct: 214 KYGASVQDLMSWNNLSSSSIYVGQNIAV 241
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQDNGTTVDALKKANKLTTDKIVPGQKLQV 71
>gi|29378467|gb|AAO83935.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 444
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q +P + K P T V+ GDT+W L
Sbjct: 118 KKETTTQQAAPAAETKTEVKQTTQ-ATTPEPKVAETKETPVVDQNATTHAVKSGDTIWAL 176
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 177 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 206
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 109 WGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
WG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 WGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 33
>gi|401555533|gb|AFP94042.1| invasion associated protein, partial [Listeria monocytogenes]
Length = 216
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 7 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 54
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 140 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 198
Query: 112 SRKYGVSIDAIKEANGLS 129
S KYGVS+ I N LS
Sbjct: 199 SVKYGVSVQDIMSWNNLS 216
>gi|320119743|gb|ADW15970.1| invasion associated protein [Listeria monocytogenes]
Length = 210
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 5 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 52
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 133 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 191
Query: 107 TLWGLSRKYGVSIDAI 122
T+W LS KYGVS+ I
Sbjct: 192 TIWALSVKYGVSVQDI 207
>gi|320119731|gb|ADW15964.1| invasion associated protein [Listeria innocua]
gi|401555547|gb|AFP94049.1| invasion associated protein, partial [Listeria innocua]
gi|401555559|gb|AFP94055.1| invasion associated protein, partial [Listeria innocua]
Length = 214
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 4 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 53
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 136 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 195
Query: 113 RKYGVSIDAIKEANGLS 129
KYGVS+ I N LS
Sbjct: 196 VKYGVSVQDIMSWNNLS 212
>gi|404283021|ref|YP_006683918.1| cell wall hydrolases A [Listeria monocytogenes SLCC2372]
gi|405757576|ref|YP_006686852.1| cell wall hydrolases A [Listeria monocytogenes SLCC2479]
gi|404232523|emb|CBY53926.1| cell wall hydrolases A, LysM domain [Listeria monocytogenes
SLCC2372]
gi|404235458|emb|CBY56860.1| cell wall hydrolases A, LysM domain [Listeria monocytogenes
SLCC2479]
Length = 486
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|321311561|ref|YP_004203848.1| putative exported cell wall-binding protein [Bacillus subtilis
BSn5]
gi|428279554|ref|YP_005561289.1| hypothetical protein BSNT_03130 [Bacillus subtilis subsp. natto
BEST195]
gi|291484511|dbj|BAI85586.1| hypothetical protein BSNT_03130 [Bacillus subtilis subsp. natto
BEST195]
gi|320017835|gb|ADV92821.1| putative exported cell wall-binding protein [Bacillus subtilis
BSn5]
Length = 287
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS + + + +GDTLWG+S+K GV++ +KE N L+ D I AG+KL
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNKLTSDKIIAGEKL 67
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +++K+G +++ +K N LS D IYAG L +
Sbjct: 82 IKAGDTLSKIAQKFGTTVNNLKVWNNLSSDMIYAGSTLSV 121
>gi|1171970|sp|P21171.2|P60_LISMO RecName: Full=Probable endopeptidase p60; AltName:
Full=Invasion-associated protein p60; Flags: Precursor
gi|44101|emb|CAA36509.1| unnamed protein product [Listeria monocytogenes]
Length = 484
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|47096875|ref|ZP_00234454.1| protein P60 [Listeria monocytogenes str. 1/2a F6854]
gi|258612083|ref|ZP_05267286.2| invasion associated protein p60 [Listeria monocytogenes F6900]
gi|293596452|ref|ZP_05261273.2| protein p60 [Listeria monocytogenes J2818]
gi|29378439|gb|AAO83921.1| invasion associated protein p60 [Listeria monocytogenes]
gi|47014740|gb|EAL05694.1| protein P60 [Listeria monocytogenes serotype 1/2a str. F6854]
gi|258608169|gb|EEW20777.1| invasion associated protein p60 [Listeria monocytogenes F6900]
gi|293589192|gb|EFF97526.1| protein p60 [Listeria monocytogenes J2818]
Length = 480
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|320119737|gb|ADW15967.1| invasion associated protein [Listeria innocua]
gi|320119739|gb|ADW15968.1| invasion associated protein [Listeria innocua]
Length = 215
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 5 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 54
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 137 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 196
Query: 113 RKYGVSIDAIKEANGLS 129
KYGVS+ I N LS
Sbjct: 197 VKYGVSVQDIMSWNNLS 213
>gi|29378565|gb|AAO83984.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 482
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|410667515|ref|YP_006919886.1| endopeptidase LytF [Thermacetogenium phaeum DSM 12270]
gi|409105262|gb|AFV11387.1| endopeptidase LytF [Thermacetogenium phaeum DSM 12270]
Length = 278
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
S P P+ ++ + +GDTLWG++ + ++ AIKE N L+GD I+ GK L IP
Sbjct: 23 SSPGPSHAQSYTVKKGDTLWGIACSFQTTVSAIKELNNLTGDLIHPGKVLQIP 75
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 104 RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+GD LW +++KYGV + A+KEAN L + IY G+ LI+P
Sbjct: 104 QGDCLWLIAQKYGVQVAALKEANNLQSNLIYPGQVLIVP 142
>gi|347014905|gb|AEO72006.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 486
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|308173881|ref|YP_003920586.1| cell wall-binding protein [Bacillus amyloliquefaciens DSM 7]
gi|384159108|ref|YP_005541181.1| cell wall-binding protein [Bacillus amyloliquefaciens TA208]
gi|384164474|ref|YP_005545853.1| exported cell wall-binding protein [Bacillus amyloliquefaciens LL3]
gi|384168149|ref|YP_005549527.1| exported cell wall-binding protein [Bacillus amyloliquefaciens XH7]
gi|307606745|emb|CBI43116.1| putative exported cell wall-binding protein [Bacillus
amyloliquefaciens DSM 7]
gi|328553196|gb|AEB23688.1| cell wall-binding protein [Bacillus amyloliquefaciens TA208]
gi|328912029|gb|AEB63625.1| putative exported cell wall-binding protein [Bacillus
amyloliquefaciens LL3]
gi|341827428|gb|AEK88679.1| putative exported cell wall-binding protein [Bacillus
amyloliquefaciens XH7]
Length = 290
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + + + +GDTLWG+S+K GV++ +KE N LS D I G+KL I
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNQLSSDLIIEGEKLTI 69
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S E + + +GD+LW +++K+G S++ +K N L D IYAG L +
Sbjct: 70 SSVETTTSGQYTVKQGDSLWKIAQKFGTSVNNLKSLNNLQSDIIYAGTTLKV 121
>gi|441473306|emb|CCQ23060.1| Probable endopeptidase p60 [Listeria monocytogenes N53-1]
Length = 481
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 154 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 212
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 213 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
>gi|29378427|gb|AAO83915.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 480
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
PAS VE GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 26 PASTVVVEA--GDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|29378431|gb|AAO83917.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 482
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|374294978|ref|YP_005045169.1| copper amine oxidase family protein,LysM domain-containing
protein,SH3 domain-containing protein [Clostridium
clariflavum DSM 19732]
gi|359824472|gb|AEV67245.1| copper amine oxidase family protein,LysM domain-containing
protein,SH3 domain-containing protein [Clostridium
clariflavum DSM 19732]
Length = 503
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ GD+LW +S+K+G +ID IK+ NGL+ D IY +KLII
Sbjct: 153 VMSGDSLWLISQKFGTTIDKIKQLNGLTSDIIYVNQKLII 192
>gi|320119733|gb|ADW15965.1| invasion associated protein [Listeria innocua]
Length = 215
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 5 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 54
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 137 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 196
Query: 113 RKYGVSIDAIKEANGLS 129
KYGVS+ I N LS
Sbjct: 197 VKYGVSVQDIMSWNNLS 213
>gi|404412664|ref|YP_006698251.1| cell wall hydrolases A [Listeria monocytogenes SLCC7179]
gi|29378463|gb|AAO83933.1| invasion associated protein p60 [Listeria monocytogenes]
gi|404238363|emb|CBY59764.1| cell wall hydrolases A, LysM domain [Listeria monocytogenes
SLCC7179]
Length = 484
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|284800862|ref|YP_003412727.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes 08-5578]
gi|284994048|ref|YP_003415816.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes 08-5923]
gi|29378429|gb|AAO83916.1| invasion associated protein p60 [Listeria monocytogenes]
gi|284056424|gb|ADB67365.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes 08-5578]
gi|284059515|gb|ADB70454.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes 08-5923]
Length = 482
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|401555509|gb|AFP94030.1| invasion associated protein, partial [Listeria innocua]
Length = 209
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 4 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 53
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 136 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 195
Query: 113 RKYGVSIDAIKEAN 126
KYGVS+ I N
Sbjct: 196 VKYGVSVQDIMSWN 209
>gi|29378459|gb|AAO83931.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 484
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 22 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|226223211|ref|YP_002757318.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|405748947|ref|YP_006672413.1| cell wall hydrolases A [Listeria monocytogenes ATCC 19117]
gi|406703365|ref|YP_006753719.1| cell wall hydrolases A, LysM domain [Listeria monocytogenes L312]
gi|424822323|ref|ZP_18247336.1| Protein p60 [Listeria monocytogenes str. Scott A]
gi|29378541|gb|AAO83972.1| invasion associated protein p60 [Listeria monocytogenes]
gi|225875673|emb|CAS04376.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes serotype 4b str. CLIP 80459]
gi|332311003|gb|EGJ24098.1| Protein p60 [Listeria monocytogenes str. Scott A]
gi|347014903|gb|AEO72005.1| invasion associated protein p60 [Listeria monocytogenes]
gi|347014917|gb|AEO72012.1| invasion associated protein p60 [Listeria monocytogenes]
gi|404218147|emb|CBY69511.1| cell wall hydrolases A, LysM domain [Listeria monocytogenes ATCC
19117]
gi|406360395|emb|CBY66668.1| cell wall hydrolases A, LysM domain [Listeria monocytogenes L312]
Length = 477
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 155 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 214 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|404280140|ref|YP_006681038.1| cell wall hydrolases A [Listeria monocytogenes SLCC2755]
gi|404285951|ref|YP_006692537.1| cell wall hydrolases A [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405754666|ref|YP_006678130.1| cell wall hydrolases A [Listeria monocytogenes SLCC2540]
gi|404223866|emb|CBY75228.1| cell wall hydrolases A, LysM domain [Listeria monocytogenes
SLCC2540]
gi|404226775|emb|CBY48180.1| cell wall hydrolases A, LysM domain [Listeria monocytogenes
SLCC2755]
gi|404244880|emb|CBY03105.1| cell wall hydrolases A, LysM domain [Listeria monocytogenes
serotype 7 str. SLCC2482]
Length = 479
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 155 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 214 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|401555519|gb|AFP94035.1| invasion associated protein, partial [Listeria innocua]
Length = 215
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 4 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 53
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 136 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 195
Query: 113 RKYGVSIDAIKEANGLS 129
KYGVS+ I N LS
Sbjct: 196 VKYGVSVQDIMSWNNLS 212
>gi|375362584|ref|YP_005130623.1| hypothetical protein BACAU_1894 [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|421731428|ref|ZP_16170554.1| putative protein yocH [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|451346725|ref|YP_007445356.1| hypothetical protein KSO_009900 [Bacillus amyloliquefaciens IT-45]
gi|371568578|emb|CCF05428.1| putative protein yocH [Bacillus amyloliquefaciens subsp. plantarum
CAU B946]
gi|407075582|gb|EKE48569.1| putative protein yocH [Bacillus amyloliquefaciens subsp. plantarum
M27]
gi|449850483|gb|AGF27475.1| hypothetical protein KSO_009900 [Bacillus amyloliquefaciens IT-45]
Length = 290
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + + + +GDTLWG+S+K GV++ +KE N LS D I G+KL I
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNQLSSDLIIEGEKLTI 69
Score = 42.4 bits (98), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S E + + +GD+LW +++K+G S+ +K N L D IYAG L
Sbjct: 70 SSVETTTSGQYTVKQGDSLWKIAQKFGTSVGNLKSLNNLQSDIIYAGTTL 119
>gi|30314065|gb|AAO47058.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314077|gb|AAO47064.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314081|gb|AAO47066.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314083|gb|AAO47067.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 229
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 105 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 163
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 164 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 193
>gi|29378457|gb|AAO83930.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 494
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|401555499|gb|AFP94025.1| invasion associated protein, partial [Listeria innocua]
gi|401555545|gb|AFP94048.1| invasion associated protein, partial [Listeria innocua]
gi|401555549|gb|AFP94050.1| invasion associated protein, partial [Listeria innocua]
Length = 213
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 4 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 53
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 136 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 195
Query: 113 RKYGVSIDAIKEANGLS 129
KYGVS+ I N LS
Sbjct: 196 VKYGVSVQDIMSWNNLS 212
>gi|30314079|gb|AAO47065.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 192
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 104 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 162
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 163 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 192
>gi|29378479|gb|AAO83941.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 484
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|16802625|ref|NP_464110.1| invasion associated secreted endopeptidase [Listeria monocytogenes
EGD-e]
gi|16409958|emb|CAC98661.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes EGD-e]
Length = 482
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 154 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 212
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 213 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
>gi|401555501|gb|AFP94026.1| invasion associated protein, partial [Listeria innocua]
gi|401555503|gb|AFP94027.1| invasion associated protein, partial [Listeria innocua]
gi|401555507|gb|AFP94029.1| invasion associated protein, partial [Listeria innocua]
gi|401555521|gb|AFP94036.1| invasion associated protein, partial [Listeria innocua]
gi|401555523|gb|AFP94037.1| invasion associated protein, partial [Listeria innocua]
gi|401555557|gb|AFP94054.1| invasion associated protein, partial [Listeria innocua]
gi|401555563|gb|AFP94057.1| invasion associated protein, partial [Listeria innocua]
Length = 212
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 4 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 53
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 136 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 195
Query: 113 RKYGVSIDAIKEANGLS 129
KYGVS+ I N LS
Sbjct: 196 VKYGVSVQDIMSWNNLS 212
>gi|386049509|ref|YP_005967500.1| invasion associated protein p60 [Listeria monocytogenes FSL R2-561]
gi|346423355|gb|AEO24880.1| invasion associated protein p60 [Listeria monocytogenes FSL R2-561]
Length = 484
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 154 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 212
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 213 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
>gi|386052845|ref|YP_005970403.1| invasion associated protein p60 [Listeria monocytogenes Finland
1998]
gi|346645496|gb|AEO38121.1| invasion associated protein p60 [Listeria monocytogenes Finland
1998]
Length = 478
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 154 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 212
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 213 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
>gi|386046240|ref|YP_005964572.1| p60 [Listeria monocytogenes J0161]
gi|345533231|gb|AEO02672.1| p60 [Listeria monocytogenes J0161]
Length = 478
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 154 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 212
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 213 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
>gi|254828351|ref|ZP_05233038.1| invasion associated protein p60 [Listeria monocytogenes FSL N3-165]
gi|258600744|gb|EEW14069.1| invasion associated protein p60 [Listeria monocytogenes FSL N3-165]
Length = 480
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 154 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 212
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 213 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 242
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
>gi|47093323|ref|ZP_00231092.1| protein P60 [Listeria monocytogenes str. 4b H7858]
gi|47018292|gb|EAL09056.1| protein P60 [Listeria monocytogenes serotype 4b str. H7858]
Length = 469
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 153 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 211
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 212 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 241
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
>gi|29378551|gb|AAO83977.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 155 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 214 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 25 ASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|29378485|gb|AAO83944.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 471
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 155 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 214 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|52141731|ref|YP_085097.1| cell wall hydrolase; spore-cortex lytic enzyme [Bacillus cereus
E33L]
gi|51975200|gb|AAU16750.1| cell wall hydrolase; spore-cortex lytic enzyme [Bacillus cereus
E33L]
Length = 265
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++YGVSI +IK+ N D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQENHKGNDQTFIGEQLHIP 74
>gi|29378469|gb|AAO83936.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 486
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|29378461|gb|AAO83932.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 484
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|401555515|gb|AFP94033.1| invasion associated protein, partial [Listeria innocua]
gi|401555517|gb|AFP94034.1| invasion associated protein, partial [Listeria innocua]
Length = 213
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 4 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 53
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 136 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 195
Query: 113 RKYGVSIDAIKEANGLS 129
KYGVS+ I N LS
Sbjct: 196 VKYGVSVQDIMSWNNLS 212
>gi|289435957|ref|YP_003465829.1| N-acetylmuramoyl-L-alanine amidase family protein [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289172201|emb|CBH28747.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 662
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ +T + +GD+LW +SR+Y ++D IK N L+ +TIY G+KL I
Sbjct: 615 SATKTHTVKKGDSLWSVSRQYNTTVDNIKSWNKLTSNTIYIGQKLTI 661
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 88 EKSEPEPAS-CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+ S+P ++ +T +V+GD+LW ++ KY VS+ +K N L D IY G+KL
Sbjct: 465 DTSKPSTSTNAKTYTVVKGDSLWKIATKYNVSVANLKSWNNLKSDNIYIGQKL 517
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T +V+GD+LW ++ KY VS+ +K N L D IY G+KL
Sbjct: 398 AKTYTVVKGDSLWKIATKYNVSVANLKSWNNLKSDNIYIGQKL 440
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+S +T +V+GD+LW ++ KY VS+ +K N L DTI G+KL
Sbjct: 546 SSSAKTYTVVKGDSLWKIATKYNVSVANLKSWNNLKSDTINIGQKL 591
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T +V+GDTL ++ KY VS+ +K N L DTIY G+KL
Sbjct: 329 TYTVVKGDTLSKIASKYKVSVANLKSWNNLKSDTIYVGQKL 369
>gi|401555513|gb|AFP94032.1| invasion associated protein, partial [Listeria innocua]
Length = 209
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 4 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 53
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 136 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 195
Query: 113 RKYGVSIDAIKEAN 126
KYGVS+ I N
Sbjct: 196 VKYGVSVQDIMSWN 209
>gi|29378537|gb|AAO83970.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 155 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 214 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 22 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKILPGQKLQV 71
>gi|401555511|gb|AFP94031.1| invasion associated protein, partial [Listeria innocua]
gi|401555527|gb|AFP94039.1| invasion associated protein, partial [Listeria innocua]
gi|401555551|gb|AFP94051.1| invasion associated protein, partial [Listeria innocua]
gi|401555561|gb|AFP94056.1| invasion associated protein, partial [Listeria innocua]
Length = 212
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 4 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 53
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 136 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 195
Query: 113 RKYGVSIDAIKEANGLS 129
KYGVS+ I N LS
Sbjct: 196 VKYGVSVQDIMSWNNLS 212
>gi|29378523|gb|AAO83963.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 478
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 155 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 214 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++D IK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDTIKKANNLTTDKIVPGQKLQV 71
>gi|29378521|gb|AAO83962.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 478
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 155 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 214 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|29378455|gb|AAO83929.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 459
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 135 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 193
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 194 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 223
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIXPGQKLQV 50
>gi|29378493|gb|AAO83948.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 150 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 208
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T+W LS KYGVS+ I N LS +IY G+KL I
Sbjct: 209 TIWALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|29378525|gb|AAO83964.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 471
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 155 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 214 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|83590930|ref|YP_430939.1| NLP/P60 [Moorella thermoacetica ATCC 39073]
gi|83573844|gb|ABC20396.1| NLP/P60 [Moorella thermoacetica ATCC 39073]
Length = 217
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E+ +GDTLW LSR+YGV+++ IK AN L IY G+ L IP
Sbjct: 31 EVKKGDTLWALSRRYGVTVEQIKAANNLDSSLIYIGQILEIP 72
>gi|390943441|ref|YP_006407202.1| transglycosylase family protein,LysM domain-containing protein
[Belliella baltica DSM 15883]
gi|390416869|gb|AFL84447.1| transglycosylase family protein,LysM domain-containing protein
[Belliella baltica DSM 15883]
Length = 533
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 16/93 (17%)
Query: 56 NETTQPQPI-------AESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTL 108
N+ QP PI +++QPI P +Q TKP T+++ P S + +G+ L
Sbjct: 447 NQQRQPAPIPQAQSAPTQTSQPITRPVEQ---TKP---TQQASPTRISH---TVSQGENL 497
Query: 109 WGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ +S+KYGV I+ IK N LS D I G+KLII
Sbjct: 498 FRISQKYGVKIEEIKRWNNLSSDNIQLGQKLII 530
>gi|30314071|gb|AAO47061.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314073|gb|AAO47062.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314075|gb|AAO47063.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 228
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 104 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 162
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 163 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 192
>gi|29378425|gb|AAO83914.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 480
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIXPGQKLQV 71
>gi|398307606|ref|ZP_10511192.1| protein YocH [Bacillus vallismortis DV1-F-3]
Length = 282
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS + + + +GDTLWG+S+K GV++ +KE N L+ D I AG+KL
Sbjct: 23 ASAKEITVQKGDTLWGISQKNGVNLKDLKEWNKLTSDKIIAGEKL 67
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL +++++G +++ +K N LS D IYAG L +
Sbjct: 82 IKAGDTLTKIAQQFGTTVNNLKVWNNLSSDMIYAGSTLSV 121
>gi|431793375|ref|YP_007220280.1| LysM domain-containing protein [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430783601|gb|AGA68884.1| LysM domain-containing protein [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 91
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
++ S+ A RT + RGDT++ +SRKYG S+ +I AN LS + IY G+KL IP
Sbjct: 34 TSKMSQQYKAPTRTYTVNRGDTIYNISRKYGTSMQSIIHANSLSNPNRIYPGQKLWIP 91
>gi|29378513|gb|AAO83958.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 457
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 133 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 191
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 192 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 221
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 3 ASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 49
>gi|29378515|gb|AAO83959.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 479
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 155 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 214 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 25 ASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|29378509|gb|AAO83956.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFASPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 150 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 208
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T+W LS KYGVS+ I N LS +IY G+KL I
Sbjct: 209 TIWALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
>gi|149663|gb|AAA25283.1| extracellular protein [Listeria innocua]
Length = 481
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 55 RNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETTQ +P E+ ++ P Q P K P T V+ GDT+W LS
Sbjct: 154 KKETTQQVKPATEAKTEVKQPTTQQTAPAPKAAETKEAPVVDQNATTHNVKSGDTIWALS 213
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKK 138
KYGVS+ I N LS +IY G+K
Sbjct: 214 VKYGVSVQDIMSWNNLSSSSIYVGQK 239
>gi|29378471|gb|AAO83937.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 465
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 135 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 193
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 194 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 223
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 50
>gi|29378453|gb|AAO83928.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 459
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 135 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 193
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 194 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 223
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 50
>gi|254932143|ref|ZP_05265502.1| invasion associated protein p60 [Listeria monocytogenes HPB2262]
gi|386731349|ref|YP_006204845.1| invasion associated secreted endopeptidase [Listeria monocytogenes
07PF0776]
gi|417316853|ref|ZP_12103486.1| invasion associated secreted endopeptidase [Listeria monocytogenes
J1-220]
gi|293583699|gb|EFF95731.1| invasion associated protein p60 [Listeria monocytogenes HPB2262]
gi|328475869|gb|EGF46605.1| invasion associated secreted endopeptidase [Listeria monocytogenes
J1-220]
gi|384390107|gb|AFH79177.1| invasion associated secreted endopeptidase [Listeria monocytogenes
07PF0776]
Length = 475
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 153 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 211
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 212 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 241
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
>gi|254824145|ref|ZP_05229146.1| invasion associated protein p60 [Listeria monocytogenes FSL J1-194]
gi|254853219|ref|ZP_05242567.1| invasion associated protein p60 [Listeria monocytogenes FSL R2-503]
gi|254991726|ref|ZP_05273916.1| invasion associated secreted endopeptidase [Listeria monocytogenes
FSL J2-064]
gi|255520992|ref|ZP_05388229.1| invasion associated secreted endopeptidase [Listeria monocytogenes
FSL J1-175]
gi|300765353|ref|ZP_07075336.1| hypothetical protein LMHG_10255 [Listeria monocytogenes FSL N1-017]
gi|258606573|gb|EEW19181.1| invasion associated protein p60 [Listeria monocytogenes FSL R2-503]
gi|293593377|gb|EFG01138.1| invasion associated protein p60 [Listeria monocytogenes FSL J1-194]
gi|300513914|gb|EFK40978.1| hypothetical protein LMHG_10255 [Listeria monocytogenes FSL N1-017]
Length = 477
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 153 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 211
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 212 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 241
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
>gi|30314085|gb|AAO47068.1| invasion-associated protein p60 [Listeria monocytogenes]
gi|30314089|gb|AAO47070.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 228
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 99 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 157
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T+W LS KYGVS+ I N LS +IY G+KL I
Sbjct: 158 TIWALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 192
>gi|442803854|ref|YP_007372003.1| glycoside hydrolase family 18 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739704|gb|AGC67393.1| glycoside hydrolase family 18 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 508
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P P + GDTL+GL+R +G +I A+ E NG+ TIYAG++++IP
Sbjct: 46 PVPGRAFQYTVRAGDTLYGLARLFGTTIQALAELNGIENTTIYAGQRILIP 96
>gi|29378527|gb|AAO83965.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 457
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 133 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 191
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 192 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 221
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 3 ASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 49
>gi|46906827|ref|YP_013216.1| invasion associated secreted endopeptidase [Listeria monocytogenes
serotype 4b str. F2365]
gi|405751810|ref|YP_006675275.1| cell wall hydrolases A [Listeria monocytogenes SLCC2378]
gi|29378495|gb|AAO83949.1| invasion associated protein p60 [Listeria monocytogenes]
gi|29378499|gb|AAO83951.1| invasion associated protein p60 [Listeria monocytogenes]
gi|29378501|gb|AAO83952.1| invasion associated protein p60 [Listeria monocytogenes]
gi|29378505|gb|AAO83954.1| invasion associated protein p60 [Listeria monocytogenes]
gi|46880093|gb|AAT03393.1| protein P60 [Listeria monocytogenes serotype 4b str. F2365]
gi|347014915|gb|AEO72011.1| invasion associated protein p60 [Listeria monocytogenes]
gi|404221010|emb|CBY72373.1| cell wall hydrolases A, LysM domain [Listeria monocytogenes
SLCC2378]
Length = 477
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 150 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 208
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T+W LS KYGVS+ I N LS +IY G+KL I
Sbjct: 209 TIWALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|255030185|ref|ZP_05302136.1| invasion associated secreted endopeptidase [Listeria monocytogenes
LO28]
Length = 127
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 7 PTQEVKKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 65
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T+W LS KYGVS+ I N LS +IY G+KL I
Sbjct: 66 TIWALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 100
>gi|29378435|gb|AAO83919.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 456
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 128 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 186
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 187 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 216
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 TVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 43
>gi|422414229|ref|ZP_16491188.1| autolysin, partial [Listeria innocua FSL S4-378]
gi|422417171|ref|ZP_16494128.1| autolysin, partial [Listeria innocua FSL J1-023]
gi|313616710|gb|EFR89483.1| autolysin [Listeria innocua FSL S4-378]
gi|313622092|gb|EFR92675.1| autolysin [Listeria innocua FSL J1-023]
Length = 74
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 22 NKPSNSAVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 73
>gi|29378423|gb|AAO83913.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 450
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 128 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 186
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 187 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 216
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 TVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 43
>gi|29378489|gb|AAO83946.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 150 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 208
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T+W LS KYGVS+ I N LS +IY G+KL I
Sbjct: 209 TIWALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|229003995|ref|ZP_04161800.1| Cell wall hydrolase [Bacillus mycoides Rock1-4]
gi|228757271|gb|EEM06511.1| Cell wall hydrolase [Bacillus mycoides Rock1-4]
Length = 265
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%), Gaps = 4/51 (7%)
Query: 95 ASCRTVEIV----RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + +IV RGDTL ++++Y VSI +I++AN +GD IYAG+ LII
Sbjct: 90 ASNHSAQIVYQVQRGDTLEAIAKRYNVSIQSIRQANNTNGDRIYAGQHLII 140
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ + + + A+ TV+ + DTL +S YGVS+ AIK+AN + D IY G++L IP
Sbjct: 18 TLVSNQGTADAATVYTVK--KNDTLGDISIHYGVSVQAIKQANHKTNDRIYIGEQLTIP 74
>gi|29378445|gb|AAO83924.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 444
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 118 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 176
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 177 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 206
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 109 WGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
WG+++ G ++DAIK+AN L+ D I G+K +
Sbjct: 1 WGIAQSKGTTVDAIKKANNLTTDKIVPGQKXXV 33
>gi|29378481|gb|AAO83942.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 453
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 125 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 183
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 184 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 213
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 4 GDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 40
>gi|29378475|gb|AAO83939.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 449
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 121 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 179
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 180 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 209
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 106 DTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
DTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 DTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 36
>gi|423604614|ref|ZP_17580507.1| hypothetical protein IIK_01195 [Bacillus cereus VD102]
gi|401245234|gb|EJR51592.1| hypothetical protein IIK_01195 [Bacillus cereus VD102]
Length = 265
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++Y VSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKRYDVSIQSIKQANHKGNDQTFIGEQLHIP 74
>gi|206977910|ref|ZP_03238798.1| putative cell wall hydrolase [Bacillus cereus H3081.97]
gi|217961176|ref|YP_002339744.1| putative cell wall hydrolase [Bacillus cereus AH187]
gi|222097208|ref|YP_002531265.1| cell wall hydrolase [Bacillus cereus Q1]
gi|229140395|ref|ZP_04268950.1| Cell wall hydrolase [Bacillus cereus BDRD-ST26]
gi|375285677|ref|YP_005106116.1| cell wall hydrolase [Bacillus cereus NC7401]
gi|423353458|ref|ZP_17331085.1| hypothetical protein IAU_01534 [Bacillus cereus IS075]
gi|423374441|ref|ZP_17351779.1| hypothetical protein IC5_03495 [Bacillus cereus AND1407]
gi|423567349|ref|ZP_17543596.1| hypothetical protein II7_00572 [Bacillus cereus MSX-A12]
gi|206743910|gb|EDZ55329.1| putative cell wall hydrolase [Bacillus cereus H3081.97]
gi|217063817|gb|ACJ78067.1| putative cell wall hydrolase [Bacillus cereus AH187]
gi|221241266|gb|ACM13976.1| cell wall hydrolase [Bacillus cereus Q1]
gi|228642956|gb|EEK99232.1| Cell wall hydrolase [Bacillus cereus BDRD-ST26]
gi|358354204|dbj|BAL19376.1| cell wall hydrolase, putative [Bacillus cereus NC7401]
gi|401089271|gb|EJP97442.1| hypothetical protein IAU_01534 [Bacillus cereus IS075]
gi|401094353|gb|EJQ02435.1| hypothetical protein IC5_03495 [Bacillus cereus AND1407]
gi|401214437|gb|EJR21167.1| hypothetical protein II7_00572 [Bacillus cereus MSX-A12]
Length = 265
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++Y VSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKRYDVSIQSIKQANHKGNDQTFIGEQLHIP 74
>gi|424713469|ref|YP_007014184.1| Probable endopeptidase p60 [Listeria monocytogenes serotype 4b str.
LL195]
gi|424012653|emb|CCO63193.1| Probable endopeptidase p60 [Listeria monocytogenes serotype 4b str.
LL195]
Length = 541
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 214 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 272
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T+W LS KYGVS+ I N LS +IY G+KL I
Sbjct: 273 TIWALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 307
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 80 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 133
>gi|29378531|gb|AAO83967.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 458
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 134 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 192
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 193 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 222
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 50
>gi|29378545|gb|AAO83974.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 456
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 134 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 192
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 193 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 222
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 50
>gi|404330194|ref|ZP_10970642.1| NLP/P60 protein [Sporolactobacillus vineae DSM 21990 = SL153]
Length = 412
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD+LW +SR G+S+ IK AN L+ DTIYAG+KL +
Sbjct: 312 AAHGTYVVNAGDSLWAISRDNGISVAQIKTANHLNSDTIYAGQKLTV 358
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P + T +I GDTL +S K VS+ +K NGLS D I AG+ L
Sbjct: 189 PSAQNASTYKIQSGDTLSEISLKVNVSVANLKAINGLSSDQINAGQVL 236
>gi|386712598|ref|YP_006178920.1| hypothetical protein HBHAL_1266 [Halobacillus halophilus DSM 2266]
gi|384072153|emb|CCG43643.1| conserved hypothetical protein [Halobacillus halophilus DSM 2266]
Length = 256
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + + RGDTLWG+ ++YGVS++ IK+ NGLS D I+ G+ + I
Sbjct: 22 ASAQETVVDRGDTLWGIGQEYGVSVEDIKDINGLSSDLIHPGQTIQI 68
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+ + Y V +D++K N LS D I+ G++L++
Sbjct: 91 GDTLWGIGQDYSVKVDSLKSWNDLSSDLIHPGQELVV 127
>gi|29378433|gb|AAO83918.1| invasion associated protein p60 [Listeria monocytogenes]
gi|29378477|gb|AAO83940.1| invasion associated protein p60 [Listeria ivanovii subsp. ivanovii]
Length = 446
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 118 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 176
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 177 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 206
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 109 WGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
WG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 WGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 33
>gi|29378449|gb|AAO83926.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 444
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 118 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 176
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 177 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 206
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 109 WGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
WG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 WGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 33
>gi|284800423|ref|YP_003412288.1| autolysin [Listeria monocytogenes 08-5578]
gi|284993609|ref|YP_003415377.1| autolysin [Listeria monocytogenes 08-5923]
gi|284055985|gb|ADB66926.1| autolysin [Listeria monocytogenes 08-5578]
gi|284059076|gb|ADB70015.1| autolysin [Listeria monocytogenes 08-5923]
Length = 590
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 538 NNPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKSWNKLTSNMIHVGQKLTI 589
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ V+I +K N L D IY G
Sbjct: 384 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWKIANNNKVTIANLKAWNNLKSDFIYPG 443
Query: 137 KKLII 141
+KL +
Sbjct: 444 QKLKV 448
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ V+I +K N L D IY G
Sbjct: 458 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 517
Query: 137 KKLII 141
+KL +
Sbjct: 518 QKLKV 522
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V++ +K N L D IY G+KL +
Sbjct: 327 SNAKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKV 373
>gi|29378441|gb|AAO83922.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 480
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N + +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNFTFSSIYVGQKLAI 244
>gi|29378437|gb|AAO83920.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 478
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P+AE+ ++ Q P + K P T + GDT+W L
Sbjct: 156 KKETTTQQAAPVAETKTEVKQTTQ-ATTPAPKVAETKETPVIDQNATTHAAKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
>gi|29378547|gb|AAO83975.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 457
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 135 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 193
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 194 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 223
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 2 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 51
>gi|29378543|gb|AAO83973.1| invasion associated protein p60 [Listeria monocytogenes ATCC 19117]
Length = 456
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 134 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 192
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 193 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 222
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G +++AIK+AN L+ D I G+KL +
Sbjct: 1 PTIASASTVVVEAGDTLWGIAQSKGTTVEAIKKANNLTTDKIVPGQKLQV 50
>gi|29378447|gb|AAO83925.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 446
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 118 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 176
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 177 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 206
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 109 WGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
WG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 WGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 33
>gi|29378555|gb|AAO83979.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 482
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 58 TTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYG 116
T Q P AE+ ++ Q P + K P T V+ GDT+W LS KYG
Sbjct: 161 TQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWALSVKYG 219
Query: 117 VSIDAIKEANGLSGDTIYAGKKLII 141
VS+ I N LS +IY G+KL I
Sbjct: 220 VSVQDIMSWNNLSSSSIYVGQKLAI 244
>gi|304317073|ref|YP_003852218.1| cell wall hydrolase SleB [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778575|gb|ADL69134.1| cell wall hydrolase SleB [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 272
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P S T + +GD+L+ ++ KYG ++DA+K NGL+GD IY G+ +I
Sbjct: 72 PGSDNTYTVQKGDSLYLIAMKYGTTVDALKSVNGLAGDMIYPGQVFVI 119
>gi|29378421|gb|AAO83912.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 440
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 118 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 176
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 177 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 206
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 109 WGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
WG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 WGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 33
>gi|452976450|gb|EME76265.1| peptidoglycan hydrolase YocH [Bacillus sonorensis L12]
Length = 268
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS + V + +GDTLWG+S+K GVS+ +KE N LS D I G+KL
Sbjct: 22 SASAKEVTVQKGDTLWGISQKQGVSLQDLKEWNQLSSDVIIPGQKL 67
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
I +GDTLW +++K+GV+++ +K N + D IY
Sbjct: 81 IKKGDTLWKIAQKFGVTVNDLKNWNNIKSDMIY 113
>gi|29378549|gb|AAO83976.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 456
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 134 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 192
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 193 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 222
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 50
>gi|29378557|gb|AAO83980.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 479
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 155 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N S +IY G+KL I
Sbjct: 214 SVKYGVSVQDIMSWNNSSSSSIYVGQKLAI 243
>gi|29378529|gb|AAO83966.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 458
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 134 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 192
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 193 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 222
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 50
>gi|433655251|ref|YP_007298959.1| putative cell wall hydrolase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293440|gb|AGB19262.1| putative cell wall hydrolase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 272
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P S T + +GD+L+ ++ KYG ++DA+K NGL+GD IY G+ +I
Sbjct: 72 PGSDNTYTVQKGDSLYLIAMKYGTTVDALKSVNGLAGDMIYPGQVFVI 119
>gi|29378561|gb|AAO83982.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 155 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N L +IY G+KL I
Sbjct: 214 SVKYGVSVQDIMSWNNLPSSSIYVGQKLAI 243
>gi|29378465|gb|AAO83934.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 450
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 118 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 176
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 177 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 206
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 109 WGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
WG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 WGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 33
>gi|29378519|gb|AAO83961.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 155 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N L +IY G+KL I
Sbjct: 214 SVKYGVSVQDIMSWNNLPSSSIYVGQKLAI 243
>gi|29378497|gb|AAO83950.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 150 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 208
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T+W LS YGVS+ I N LS +IY G+KL I
Sbjct: 209 TIWALSVTYGVSVQDIMSWNNLSSSSIYVGQKLAI 243
>gi|302038135|ref|YP_003798457.1| hypothetical protein NIDE2827 [Candidatus Nitrospira defluvii]
gi|300606199|emb|CBK42532.1| protein of unknown function [Candidatus Nitrospira defluvii]
Length = 279
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 47 ALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGD 106
A+ PL + Q P P+ PQ + P+ S EP RT+ + GD
Sbjct: 171 AVKPLEEGGEAVPQSTPADGEAAPVSDVPQASPIVMPT----PSAAEP--VRTIVVQGGD 224
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
TLW L+R++ VS++A+K NGL + I AG+ L +P
Sbjct: 225 TLWRLARRHKVSLEALKSLNGLPTNLIVAGRTLRLP 260
>gi|29378539|gb|AAO83971.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 155 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 213
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ N LS +IY G+KL I
Sbjct: 214 SVKYGVSVQDNMSWNNLSSSSIYVGQKLAI 243
>gi|378823508|ref|ZP_09846133.1| LysM domain protein [Sutterella parvirubra YIT 11816]
gi|378597686|gb|EHY30949.1| LysM domain protein [Sutterella parvirubra YIT 11816]
Length = 674
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T K E AS +T + GDTL ++R+YG S+ AI+ ANG++G ++ G++L +P
Sbjct: 618 ATAKRLQEAASAKTHVVRSGDTLSAIARRYGTSVSAIQRANGMTGSSLRVGERLKLP 674
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 18/105 (17%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G ++ LK N L N Q ++ P +P K I KSE
Sbjct: 530 GTTVTKLKRANRLTNN---------TLRVGQRLEIPDAEPARAKREIEAPKSE------- 573
Query: 99 TVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ +VR GDTL ++ +YGV + ++ ANGL G+ I G++L+IP
Sbjct: 574 -IYVVRQGDTLSEIADRYGVGLSKLRAANGLRGNAIRIGQRLVIP 617
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 76 QQPIVTKPSIC---TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT 132
Q+ I+T P++ +++ S + + G+TL ++R+YGVS+ A++ N +SG+
Sbjct: 432 QRLILTVPNVERAPIQQASRSTGSHKIHAVSSGETLSSIARRYGVSVSALRTTNRISGNV 491
Query: 133 IYAGKKLIIP 142
I G++L IP
Sbjct: 492 IRPGQRLRIP 501
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 7/105 (6%)
Query: 38 SGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASC 97
+G++ S L+ +N + K R Q + ST I I + + P+
Sbjct: 338 AGMSESFLREVNGIPKGR------QVLPNSTLLILSDAGDDISADDADARLRLSPQTTWR 391
Query: 98 RTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
R VR GDTL ++R++ +++ +I AN L D + AG++LI+
Sbjct: 392 RVTYRVRPGDTLSTIARRWHITMKSIVTANRLRSDRLRAGQRLIL 436
>gi|333896948|ref|YP_004470822.1| cell wall hydrolase SleB [Thermoanaerobacterium xylanolyticum
LX-11]
gi|333112213|gb|AEF17150.1| cell wall hydrolase SleB [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 274
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P S T + +GD+L+ ++ KYG ++DA+K NGL+GD IY G+ +I
Sbjct: 72 PGSDNTYTVQKGDSLYLIAMKYGTTVDALKNVNGLTGDMIYPGQVFVI 119
>gi|29378503|gb|AAO83953.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 477
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Query: 50 PLNKNRNETT--QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
P + + ETT Q P AE+ ++ Q P + K P T V+ GD
Sbjct: 150 PTQEVKKETTIQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGD 208
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T+W LS KYGVS I N LS +IY G+KL I
Sbjct: 209 TIWALSVKYGVSAQDIMSWNNLSSSSIYVGQKLAI 243
>gi|417314666|ref|ZP_12101360.1| invasion associated secreted endopeptidase [Listeria monocytogenes
J1816]
gi|328467410|gb|EGF38486.1| invasion associated secreted endopeptidase [Listeria monocytogenes
J1816]
Length = 469
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 58 TTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYG 116
T Q P AE+ ++ Q P + K P T V+ GDT+W LS KYG
Sbjct: 158 TQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWALSVKYG 216
Query: 117 VSIDAIKEANGLSGDTIYAGKKLII 141
VS+ I N LS +IY G+KL I
Sbjct: 217 VSVQDIMSWNNLSSSSIYVGQKLAI 241
>gi|239905186|ref|YP_002951925.1| hypothetical protein DMR_05480 [Desulfovibrio magneticus RS-1]
gi|239795050|dbj|BAH74039.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 237
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%), Gaps = 3/63 (4%)
Query: 81 TKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKL 139
TKP++ +K P A T + RGDTL L++KYGVS AI EANG+ + D + GK L
Sbjct: 173 TKPAVGADK--PVAAGGATHTVARGDTLTRLAKKYGVSAQAIMEANGMKNADQLQLGKTL 230
Query: 140 IIP 142
IP
Sbjct: 231 TIP 233
>gi|188996357|ref|YP_001930608.1| lytic transglycosylase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188931424|gb|ACD66054.1| Lytic transglycosylase catalytic [Sulfurihydrogenibium sp. YO3AOP1]
Length = 447
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 16/112 (14%)
Query: 47 ALNPLNKNRN--ETTQPQPIAESTQPI----QPPPQQ----PIVT------KPSICTEKS 90
A N ++NR +T+ P+P E Q I QPP + +++ KP I
Sbjct: 336 AKNKTSENRYVAKTSNPKPSTEPAQTIVSQTQPPKSENSSESLISLIKTSEKPEIVKTSY 395
Query: 91 EPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+P + +GDTL+ ++RK+GVS+D ++ N L + I G++L+IP
Sbjct: 396 KPSSNKENVYIVQKGDTLFSIARKFGVSVDVLRNLNNLEDNNIKVGQELLIP 447
>gi|29378443|gb|AAO83923.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 480
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 156 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNILSSSSIYVGQKLAI 244
>gi|295694714|ref|YP_003587952.1| peptidase M23 [Kyrpidia tusciae DSM 2912]
gi|295410316|gb|ADG04808.1| Peptidase M23 [Kyrpidia tusciae DSM 2912]
Length = 288
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P + RT +V+GD+LW + ++Y VS+ A+K N LS D IY G+ L IP
Sbjct: 65 PGNSRTYTVVKGDSLWKIGQRYNVSVAALKAENQLSDDLIYPGQVLKIP 113
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P PA TV+ GDTLW + + VS+ + EAN L+ IY G+ L IP
Sbjct: 17 PTPALAYTVK--PGDTLWKIGHAHNVSVAQLMEANHLTSTWIYPGQNLQIP 65
>gi|254824947|ref|ZP_05229948.1| autolysin [Listeria monocytogenes FSL J1-194]
gi|255519686|ref|ZP_05386923.1| autolysin [Listeria monocytogenes FSL J1-175]
gi|404282262|ref|YP_006683160.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes
SLCC2755]
gi|404288076|ref|YP_006694662.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes serotype
7 str. SLCC2482]
gi|293594187|gb|EFG01948.1| autolysin [Listeria monocytogenes FSL J1-194]
gi|404228897|emb|CBY50302.1| N-acetylmuramoyl-L-alanine amidase, family 4, LysM domain [Listeria
monocytogenes SLCC2755]
gi|404247005|emb|CBY05230.1| N-acetylmuramoyl-L-alanine amidase, family 4, LysM domain [Listeria
monocytogenes serotype 7 str. SLCC2482]
Length = 591
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 539 NKPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 590
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ + V+I +K N L D IY G
Sbjct: 385 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 444
Query: 137 KKLII 141
+KL +
Sbjct: 445 QKLKV 449
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ + V+I +K N L D IY G
Sbjct: 459 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 518
Query: 137 KKLII 141
+KL +
Sbjct: 519 QKLKV 523
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V+I +K N L D IY G+KL +
Sbjct: 328 SNAKIYTVVKGDSLWRIANNHKVTIANLKAWNNLKSDFIYPGQKLKV 374
>gi|29378399|gb|AAO83901.1| invasion associated protein p60 [Listeria ivanovii]
Length = 522
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL I
Sbjct: 22 PTIASASTVVVEAGDTLWGIAQDKGTTVDALKKANNLTSDKIVPGQKLQI 71
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ T + GDT+W LS KYG S+ I N LS +IY G+ L +
Sbjct: 194 TATTYTVKSGDTIWALSSKYGTSVQNIMSWNNLSSSSIYVGQVLAV 239
>gi|422808691|ref|ZP_16857102.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes FSL J1-208]
gi|378752305|gb|EHY62890.1| P60 extracellular protein, invasion associated protein Iap
[Listeria monocytogenes FSL J1-208]
Length = 459
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 45/95 (47%), Gaps = 9/95 (9%)
Query: 50 PLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEP---EPASCRTVEIVRGD 106
P K T Q P E+ ++ Q P + K P + A+ TV+ GD
Sbjct: 151 PEVKKEATTQQAAPAVETKTEVK----QATTPAPKVAETKETPVVDQNATTHTVK--SGD 204
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T+W LS KYGVS+ I N LS +IY G+KL I
Sbjct: 205 TIWALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 239
>gi|300763552|ref|ZP_07073550.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria
monocytogenes FSL N1-017]
gi|300515829|gb|EFK42878.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria
monocytogenes FSL N1-017]
Length = 583
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 531 NKPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 582
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ + V+I +K N L D IY G
Sbjct: 377 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 436
Query: 137 KKLII 141
+KL +
Sbjct: 437 QKLKV 441
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ + V+I +K N L D IY G
Sbjct: 451 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 510
Query: 137 KKLII 141
+KL +
Sbjct: 511 QKLKV 515
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V+I +K N L D IY G+KL +
Sbjct: 320 SNAKIYTVVKGDSLWRIANNHKVTIANLKAWNNLKSDFIYPGQKLKV 366
>gi|46908869|ref|YP_015258.1| autolysin [Listeria monocytogenes serotype 4b str. F2365]
gi|47092311|ref|ZP_00230102.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria
monocytogenes str. 4b H7858]
gi|405753903|ref|YP_006677368.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes
SLCC2378]
gi|424715509|ref|YP_007016224.1| Autolysin [Listeria monocytogenes serotype 4b str. LL195]
gi|46882142|gb|AAT05435.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria
monocytogenes serotype 4b str. F2365]
gi|47019290|gb|EAL10032.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria
monocytogenes str. 4b H7858]
gi|404223103|emb|CBY74466.1| N-acetylmuramoyl-L-alanine amidase, family 4, LysM domain [Listeria
monocytogenes SLCC2378]
gi|424014693|emb|CCO65233.1| Autolysin [Listeria monocytogenes serotype 4b str. LL195]
Length = 591
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 539 NKPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 590
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ + V+I +K N L D IY G
Sbjct: 385 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 444
Query: 137 KKLII 141
+KL +
Sbjct: 445 QKLKV 449
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ + V+I +K N L D IY G
Sbjct: 459 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 518
Query: 137 KKLII 141
+KL +
Sbjct: 519 QKLKV 523
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V++ +K N L D IY G+KL +
Sbjct: 328 SNAKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKV 374
>gi|258611673|ref|ZP_05711595.1| LOW QUALITY PROTEIN: N-acetylmuramoyl-L-alanine amidase [Listeria
monocytogenes FSL R2-503]
gi|258605306|gb|EEW17914.1| LOW QUALITY PROTEIN: N-acetylmuramoyl-L-alanine amidase [Listeria
monocytogenes FSL R2-503]
Length = 548
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 496 NKPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 547
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ + V+I +K N L D IY G
Sbjct: 342 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 401
Query: 137 KKLII 141
+KL +
Sbjct: 402 QKLKV 406
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ + V+I +K N L D IY G
Sbjct: 416 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 475
Query: 137 KKLII 141
+KL +
Sbjct: 476 QKLKV 480
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V+I +K N L D IY G+KL +
Sbjct: 285 SNAKIYTVVKGDSLWRIANNHKVTIANLKAWNNLKSDFIYPGQKLKV 331
>gi|226225242|ref|YP_002759349.1| autolysin, N-acetylmuramidase [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|254931038|ref|ZP_05264397.1| autolysin [Listeria monocytogenes HPB2262]
gi|405751035|ref|YP_006674501.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes ATCC
19117]
gi|406705431|ref|YP_006755785.1| N-acetylmuramoyl-L-alanine amidase, family 4, LysM domain [Listeria
monocytogenes L312]
gi|424824441|ref|ZP_18249454.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes str.
Scott A]
gi|225877704|emb|CAS06418.1| Putative autolysin, N-acetylmuramidase [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|293582584|gb|EFF94616.1| autolysin [Listeria monocytogenes HPB2262]
gi|332313121|gb|EGJ26216.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes str.
Scott A]
gi|404220235|emb|CBY71599.1| N-acetylmuramoyl-L-alanine amidase, family 4, LysM domain [Listeria
monocytogenes ATCC 19117]
gi|406362461|emb|CBY68734.1| N-acetylmuramoyl-L-alanine amidase, family 4, LysM domain [Listeria
monocytogenes L312]
Length = 591
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 539 NKPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 590
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ + V+I +K N L D IY G
Sbjct: 385 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 444
Query: 137 KKLII 141
+KL +
Sbjct: 445 QKLKV 449
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ + V+I +K N L D IY G
Sbjct: 459 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 518
Query: 137 KKLII 141
+KL +
Sbjct: 519 QKLKV 523
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V++ +K N L D IY G+KL +
Sbjct: 328 SNAKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKV 374
>gi|254991877|ref|ZP_05274067.1| autolysin [Listeria monocytogenes FSL J2-064]
Length = 591
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 539 NKPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 590
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ + V+I +K N L D IY G
Sbjct: 385 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 444
Query: 137 KKLII 141
+KL +
Sbjct: 445 QKLKV 449
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ + V+I +K N L D IY G
Sbjct: 459 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 518
Query: 137 KKLII 141
+KL +
Sbjct: 519 QKLKV 523
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V++ +K N L D IY G+KL +
Sbjct: 328 SNAKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKV 374
>gi|266725|sp|Q01837.1|P60_LISIV RecName: Full=Probable endopeptidase p60; AltName:
Full=Invasion-associated protein p60; Flags: Precursor
gi|149665|gb|AAA25284.1| extracellular protein [Listeria ivanovii]
Length = 524
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL I
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQDKGTTVDALKKANNLTSDKIVPGQKLQI 71
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ T + GDT+W LS KYG S+ I N LS +IY G+ L +
Sbjct: 194 TASTYTVKSGDTIWALSSKYGTSVQNIMSWNNLSSSSIYVGQVLAV 239
>gi|29378401|gb|AAO83902.1| invasion associated protein p60 [Listeria ivanovii]
Length = 523
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL I
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQDKGTTVDALKKANNLTSDKIVPGQKLQI 71
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ T + GDT+W LS KYG S+ I N LS +IY G+ L +
Sbjct: 194 TASTYTVKSGDTIWALSSKYGTSVQNIMSWNNLSSSSIYVGQVLAV 239
>gi|335997045|ref|ZP_08562962.1| N-acetylmuramoyl-L-alanine amidase precursor [Lactobacillus ruminis
SPM0211]
gi|335352115|gb|EGM53606.1| N-acetylmuramoyl-L-alanine amidase precursor [Lactobacillus ruminis
SPM0211]
Length = 800
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 35/47 (74%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T V GD+LWG+++K+G+++D +K+ANGL+ + +Y G+ L +
Sbjct: 339 ATNGTYTAVAGDSLWGIAQKFGMTLDELKKANGLTSNNLYVGQTLKV 385
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G+ + LK N L N Q + +S Q ++ + S
Sbjct: 360 GMTLDELKKANGLTSNNLYVGQTLKVRKSIQQNTNNETNQNQNSNVNNNDRPQQTVTSAE 419
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LWG++ K+G S++ +K N LS + I+ G+KL+I
Sbjct: 420 TYTVKSGDSLWGIATKHGCSVNDLKSWNHLSSNLIHVGQKLVI 462
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 33 GFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEP 92
G G +++ LK+ N L+ N Q I + +Q QQ K EP
Sbjct: 431 GIATKHGCSVNDLKSWNHLSSNLIHVGQKLVIGQKKSTVQQ--QQG----------KKEP 478
Query: 93 E-PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ S T + GD+LW ++ + +S+ +K N LS D I+ G+KL++
Sbjct: 479 QQTTSNETYTVKSGDSLWKIATNHNMSVSQLKNLNKLSNDMIFVGQKLVVS 529
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 81 TKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLI 140
TK I T E A V + GD+LW ++ + G+++ +K NGLS DTIY G++L
Sbjct: 674 TKQKIKTSSKETAEAGATYV-VKAGDSLWAVANRQGLTVAELKRINGLSSDTIYVGQRLK 732
Query: 141 I 141
+
Sbjct: 733 V 733
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 18/107 (16%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPI----QPPPQQPIVTKPSICTEKSEPEPA 95
+++S LK LN L+ + Q ++E Q Q P Q VTKPS T KS
Sbjct: 504 MSVSQLKNLNKLSNDMIFVGQKLVVSEKKQSAPSQNQNKPSQSQVTKPSTYTVKS----- 558
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD++W ++ + G+S++ + NG+ + I+ G+ L +
Sbjct: 559 ---------GDSVWKIAHECGMSMNELVSLNGIKNNLIFPGQVLKVK 596
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
S T + GD++W +S ++G+S+D +K NGL + I G+ L I
Sbjct: 622 SSSTYTVKSGDSVWKISHEHGMSMDELKSLNGLKDNLIIPGQVLKIK 668
>gi|386733382|ref|YP_006206878.1| autolysin [Listeria monocytogenes 07PF0776]
gi|384392140|gb|AFH81210.1| autolysin [Listeria monocytogenes 07PF0776]
Length = 591
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 539 NKPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 590
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ + V+I +K N L D IY G
Sbjct: 385 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 444
Query: 137 KKLII 141
+KL +
Sbjct: 445 QKLKV 449
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ + V+I +K N L D IY G
Sbjct: 459 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 518
Query: 137 KKLII 141
+KL +
Sbjct: 519 QKLKV 523
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V++ +K N L D IY G+KL +
Sbjct: 328 SNAKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKV 374
>gi|347547992|ref|YP_004854320.1| putative extracellular protein P60 [Listeria ivanovii subsp.
ivanovii PAM 55]
gi|346981063|emb|CBW84988.1| Putative extracellular protein P60 [Listeria ivanovii subsp.
ivanovii PAM 55]
Length = 522
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL I
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQDKGTTVDALKKANNLTSDKIVPGQKLQI 69
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ T + GDT+W LS KYG S+ I N LS +IY G+ L +
Sbjct: 192 TASTYTVKSGDTIWALSSKYGTSVQNIMSWNNLSSSSIYVGQVLAV 237
>gi|347014931|gb|AEO72019.1| invasion associated protein p60 [Listeria ivanovii]
Length = 524
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL I
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQDKGTTVDALKKANNLTSDKIVPGQKLQI 71
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ T + GDT+W LS KYG S+ I N LS +IY G+ L +
Sbjct: 194 TASTYTVKSGDTIWALSSKYGTSVQNIMSWNNLSSSSIYVGQVLAV 239
>gi|384181571|ref|YP_005567333.1| cell wall hydrolase [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|324327655|gb|ADY22915.1| cell wall hydrolase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 265
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C++ S E ++ TV+ + DTLWG+S++Y VSI +IK+AN D + G++L IP
Sbjct: 20 VCSQ-STAEASTIHTVK--KNDTLWGISKQYDVSIQSIKQANHKGNDQTFIGEQLHIP 74
>gi|423452934|ref|ZP_17429787.1| hypothetical protein IEE_01678 [Bacillus cereus BAG5X1-1]
gi|401139493|gb|EJQ47055.1| hypothetical protein IEE_01678 [Bacillus cereus BAG5X1-1]
Length = 265
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 27 EASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGNDQTFIGEQLNIP 74
>gi|16801898|ref|NP_472166.1| autolysin [Listeria innocua Clip11262]
gi|16415373|emb|CAC98064.1| lin2838 [Listeria innocua Clip11262]
Length = 594
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 542 NKPSNSAVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 593
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 82 KPSICTEKSEPEPAS-CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLI 140
KPS T S+P ++ + + +GD+LW ++ + V+I +K N L D IY G+KL
Sbjct: 392 KPSTNTNTSKPSTSTNAKVYTVAKGDSLWRIATNHKVTIANLKSWNNLKSDFIYPGQKLK 451
Query: 141 I 141
+
Sbjct: 452 V 452
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 82 KPSICTEKSEPEPAS-CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLI 140
KPS T S+P ++ + + +GD+LW ++ + V+I +K N L D IY G+KL
Sbjct: 465 KPSTNTNTSKPSTSTNAKVYTVAKGDSLWRIATNHKVTIANLKSWNNLKSDFIYPGQKLK 524
Query: 141 I 141
+
Sbjct: 525 V 525
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ +V+GD+LW ++ + V+I +K N L D IY G+KL +
Sbjct: 335 AKIYTVVKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPGQKLKV 379
>gi|90419389|ref|ZP_01227299.1| putative peptidoglycan-binding peptidase, M23/M37 family
[Aurantimonas manganoxydans SI85-9A1]
gi|90336326|gb|EAS50067.1| putative peptidoglycan-binding peptidase, M23/M37 family
[Aurantimonas manganoxydans SI85-9A1]
Length = 439
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 61 PQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSID 120
P + E + P +P+ + S T + A+ +V++ GD+L G++R+ GVS+
Sbjct: 154 PSTLGEQAARVVSPQSRPM--QSSAATSQPTRSAAASGSVKVESGDSLLGIARRTGVSVA 211
Query: 121 AIKEANGLSGDTIYAGKKLIIP 142
IK ANG+S DTI G+ L +P
Sbjct: 212 DIKRANGMSDDTIRIGQTLSLP 233
>gi|16804728|ref|NP_466213.1| autolysin [Listeria monocytogenes EGD-e]
gi|386051674|ref|YP_005969665.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
R2-561]
gi|404285199|ref|YP_006686096.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes
SLCC2372]
gi|405759755|ref|YP_006689031.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes
SLCC2479]
gi|16412191|emb|CAD00904.1| lmo2691 [Listeria monocytogenes EGD-e]
gi|346425520|gb|AEO27045.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
R2-561]
gi|404234701|emb|CBY56104.1| N-acetylmuramoyl-L-alanine amidase, family 4, LysM domain [Listeria
monocytogenes SLCC2372]
gi|404237637|emb|CBY59039.1| N-acetylmuramoyl-L-alanine amidase, family 4, LysM domain [Listeria
monocytogenes SLCC2479]
Length = 590
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 538 NNPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 589
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ V+I +K N L D IY G
Sbjct: 384 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 443
Query: 137 KKLII 141
+KL +
Sbjct: 444 QKLKV 448
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ V+I +K N L D IY G
Sbjct: 458 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 517
Query: 137 KKLII 141
+KL +
Sbjct: 518 QKLKV 522
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V++ +K N L D IY G+KL +
Sbjct: 327 SNAKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKV 373
>gi|373857072|ref|ZP_09599815.1| Peptidoglycan-binding lysin domain protein [Bacillus sp. 1NLA3E]
gi|372453318|gb|EHP26786.1| Peptidoglycan-binding lysin domain protein [Bacillus sp. 1NLA3E]
Length = 325
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 76 QQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYA 135
QQ +V + T +E E + TV+ +GDTL+ LS+KY VS + + ANGLS D I
Sbjct: 90 QQLLVPDEHLSTSHTE-ETSGLYTVK--KGDTLYSLSKKYQVSTNLLMVANGLSSDKIKV 146
Query: 136 GKKLIIP 142
+KL++P
Sbjct: 147 SQKLLVP 153
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 30/39 (76%)
Query: 104 RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+GDTL+GL++KY +SI+ + + N L+ + ++ ++L++P
Sbjct: 57 KGDTLYGLAKKYQISINQLMDVNNLASEKLFINQQLLVP 95
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 104 RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+GDTL+ L++KY S+ +K+AN L D +Y G+++ +P
Sbjct: 172 KGDTLFSLAKKYDTSVIELKKANNLRTDNLYIGQQISVP 210
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 29/41 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+V GD+L G++ ++GV++ +K+AN L + + G+KL IP
Sbjct: 224 VVPGDSLSGIASRFGVTMAELKKANVLHQNMVLIGQKLHIP 264
>gi|443633451|ref|ZP_21117629.1| cell wall hydrolase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443347185|gb|ELS61244.1| cell wall hydrolase [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 336
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +++++ +GDTLW LSRKY +I IK N L D IYAG+ L I
Sbjct: 22 AASAQSIKVKKGDTLWELSRKYDTTISKIKSENHLRSDIIYAGQTLSI 69
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
++ GD+LW +S KYG+++ +K+ NGL D + G+ L
Sbjct: 88 KVKSGDSLWKISNKYGMTVSELKKLNGLKSDLLRIGQVL 126
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
++ GD+L ++ KYG ++ +K NGL D IYAG+ L
Sbjct: 151 KVKSGDSLSKIASKYGTTVSKLKSLNGLKSDLIYAGQVL 189
>gi|386044999|ref|YP_005963804.1| autolysin [Listeria monocytogenes 10403S]
gi|404411943|ref|YP_006697531.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes
SLCC5850]
gi|404414767|ref|YP_006700354.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes
SLCC7179]
gi|345538233|gb|AEO07673.1| autolysin [Listeria monocytogenes 10403S]
gi|404231769|emb|CBY53173.1| N-acetylmuramoyl-L-alanine amidase, family 4, LysM domain [Listeria
monocytogenes SLCC5850]
gi|404240466|emb|CBY61867.1| N-acetylmuramoyl-L-alanine amidase, family 4, LysM domain [Listeria
monocytogenes SLCC7179]
Length = 590
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 538 NNPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 589
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ V+I +K N L D IY G
Sbjct: 384 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 443
Query: 137 KKLII 141
+KL +
Sbjct: 444 QKLKV 448
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ V+I +K N L D IY G
Sbjct: 458 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 517
Query: 137 KKLII 141
+KL +
Sbjct: 518 QKLKV 522
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V++ +K N L D IY G+KL +
Sbjct: 327 SNAKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKV 373
>gi|254829143|ref|ZP_05233830.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
N3-165]
gi|258601553|gb|EEW14878.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes FSL
N3-165]
Length = 590
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 538 NNPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 589
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ V+I +K N L D IY G
Sbjct: 384 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 443
Query: 137 KKLII 141
+KL +
Sbjct: 444 QKLKV 448
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ V+I +K N L D IY G
Sbjct: 458 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 517
Query: 137 KKLII 141
+KL +
Sbjct: 518 QKLKV 522
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V++ +K N L D IY G+KL +
Sbjct: 327 SNAKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKV 373
>gi|255028103|ref|ZP_05300054.1| autolysin [Listeria monocytogenes LO28]
Length = 590
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 538 NNPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 589
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ V+I +K N L D IY G
Sbjct: 384 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 443
Query: 137 KKLII 141
+KL +
Sbjct: 444 QKLKV 448
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ V+I +K N L D IY G
Sbjct: 458 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 517
Query: 137 KKLII 141
+KL +
Sbjct: 518 QKLKV 522
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V++ +K N L D IY G+KL +
Sbjct: 327 SNAKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKV 373
>gi|47095496|ref|ZP_00233105.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria
monocytogenes str. 1/2a F6854]
gi|254912940|ref|ZP_05262952.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes J2818]
gi|254937321|ref|ZP_05269018.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes F6900]
gi|386048424|ref|YP_005966756.1| autolysin [Listeria monocytogenes J0161]
gi|47016106|gb|EAL07030.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria
monocytogenes str. 1/2a F6854]
gi|258609926|gb|EEW22534.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes F6900]
gi|293590940|gb|EFF99274.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes J2818]
gi|345535415|gb|AEO04856.1| autolysin [Listeria monocytogenes J0161]
Length = 590
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 538 NNPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 589
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ V+I +K N L D IY G
Sbjct: 384 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 443
Query: 137 KKLII 141
+KL +
Sbjct: 444 QKLKV 448
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ V+I +K N L D IY G
Sbjct: 458 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 517
Query: 137 KKLII 141
+KL +
Sbjct: 518 QKLKV 522
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ +V+GD+LW ++ + V++ +K N L D IY G+KL +
Sbjct: 329 AKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKV 373
>gi|217966113|ref|YP_002351791.1| autolysin [Listeria monocytogenes HCC23]
gi|386009467|ref|YP_005927745.1| N-acetylmuramoyl-L-alanine amidase family protein [Listeria
monocytogenes L99]
gi|386028087|ref|YP_005948863.1| autolysin [Listeria monocytogenes M7]
gi|217335383|gb|ACK41177.1| autolysin (Peptidoglycan hydrolase) (Beta-glycosidase) [Listeria
monocytogenes HCC23]
gi|307572277|emb|CAR85456.1| N-acetylmuramoyl-L-alanine amidase, family 4 [Listeria
monocytogenes L99]
gi|336024668|gb|AEH93805.1| autolysin [Listeria monocytogenes M7]
Length = 593
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 541 NKPSNSAVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 592
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V+I +K N L D IY G+KL +
Sbjct: 328 SNAKVYTVVKGDSLWRIANNHKVTIANLKAWNNLKSDFIYPGQKLKV 374
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 82 KPSICTEKSEPEPASCRTVEIV---RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKK 138
KPS T ++P ++ +I +GD+LW ++ V+I +K N L D IY G+K
Sbjct: 462 KPSTNTNTAKPSTSTSTNAKIYTVAKGDSLWRIATNNKVTIANLKTWNNLKSDFIYPGQK 521
Query: 139 LII 141
L +
Sbjct: 522 LKV 524
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ + +V+GD+LW ++ V+I +K N L D IY G+KL +
Sbjct: 404 NAKVYTVVKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPGQKLKV 449
>gi|386054880|ref|YP_005972438.1| N-acetylmuramoyl-L-alanine amidase, family 4 protein [Listeria
monocytogenes Finland 1998]
gi|346647531|gb|AEO40156.1| N-acetylmuramoyl-L-alanine amidase, family 4 protein [Listeria
monocytogenes Finland 1998]
Length = 590
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 538 NNPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 589
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ V+I +K N L D IY G
Sbjct: 384 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 443
Query: 137 KKLII 141
+KL +
Sbjct: 444 QKLKV 448
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ V+I +K N L D IY G
Sbjct: 458 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 517
Query: 137 KKLII 141
+KL +
Sbjct: 518 QKLKV 522
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V++ +K N L D IY G+KL +
Sbjct: 327 SNAKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKV 373
>gi|404409069|ref|YP_006691784.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes
SLCC2376]
gi|404243218|emb|CBY64618.1| N-acetylmuramoyl-L-alanine amidase, family 4, LysM domain [Listeria
monocytogenes SLCC2376]
Length = 589
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 537 NNPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 588
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ V+I +K N L D IY G
Sbjct: 385 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 444
Query: 137 KKLII 141
+KL +
Sbjct: 445 QKLKV 449
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V+I +K N L D IY G+KL +
Sbjct: 328 SNAKVYTVVKGDSLWRIANNHKVTIANLKAWNNLKSDFIYPGQKLKV 374
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 80 VTKPSICTEK-SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKK 138
+KP+ T K S + + + +GD+LW ++ V+I +K N L D IY G+K
Sbjct: 459 TSKPNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPGQK 518
Query: 139 LII 141
L +
Sbjct: 519 LKV 521
>gi|373858549|ref|ZP_09601285.1| NLP/P60 protein [Bacillus sp. 1NLA3E]
gi|372451689|gb|EHP25164.1| NLP/P60 protein [Bacillus sp. 1NLA3E]
Length = 518
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 32/42 (76%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGK 137
+ + ++V GD+LWG+S+K+GV++DAI+ N L+ D ++ G+
Sbjct: 219 TIASYQVVSGDSLWGISKKFGVTVDAIQSGNNLTSDRLFVGQ 260
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 22/104 (21%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G+++ LKA+N L+ + Q I ++T P P
Sbjct: 117 GMSVDQLKAVNNLSSDMLSIGQVLYITKTTVPSVTP----------------------ST 154
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T +V GD+L+G++++Y +++D++K N L+ D + G+ L +P
Sbjct: 155 TYRVVAGDSLYGIAKRYSITVDSLKSTNQLTSDVLSVGQVLSVP 198
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 49 NPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVE------- 101
N + K NE P+ I T +Q I++ S+ A T+
Sbjct: 45 NDVQKYMNEKI-PKKIIVKT--VQIMIGTVIISTISLTGNHFNSTSAEASTINADQGASY 101
Query: 102 IVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
IV+ GDTL+G++++YG+S+D +K N LS D + G+ L I
Sbjct: 102 IVKAGDTLFGIAKQYGMSVDQLKAVNNLSSDMLSIGQVLYI 142
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD+L ++++Y ++DA+K N LS D I G+ LIIP
Sbjct: 286 GDSLSAIAKQYNTTVDALKHINQLSTDMILIGQVLIIP 323
>gi|423101288|ref|ZP_17088992.1| gametolysin [Listeria innocua ATCC 33091]
gi|370792074|gb|EHN59965.1| gametolysin [Listeria innocua ATCC 33091]
Length = 594
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 542 NKPSNSAVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 593
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 82 KPSICTEKSEPEPAS-CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLI 140
KPS T S+P ++ + + +GD+LW ++ + V+I +K N L D IY G+KL
Sbjct: 392 KPSTNTNTSKPSTSTNAKVYTVAKGDSLWRIATNHKVTIANLKSWNNLKSDFIYPGQKLK 451
Query: 141 I 141
+
Sbjct: 452 V 452
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 82 KPSICTEKSEPEPAS-CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLI 140
KPS T S+P ++ + + +GD+LW ++ + V+I +K N L D IY G+KL
Sbjct: 465 KPSTNTNTSKPSTSTNAKVYTVAKGDSLWRIATNHKVTIANLKSWNNLKSDFIYPGQKLK 524
Query: 141 I 141
+
Sbjct: 525 V 525
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V+I +K N L D IY G+KL +
Sbjct: 333 SNAKIYTVVKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPGQKLKV 379
>gi|255026451|ref|ZP_05298437.1| invasion associated secreted endopeptidase [Listeria monocytogenes
FSL J2-003]
Length = 285
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 20 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 78
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 79 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 108
>gi|452995577|emb|CCQ92757.1| hypothetical protein CULT_1090014 [Clostridium ultunense Esp]
Length = 290
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 63/146 (43%), Gaps = 25/146 (17%)
Query: 18 DGSGDGREAAVAKTAGFVVFSGIAISILKA----------LNPLNKNRNETTQPQPIA-- 65
DG GD + AV + A ++KA L L K+ N+T Q +P
Sbjct: 147 DGVGDKKITAVDRAALVKALEESPFGVMKAGGVGYIQGVTLAALEKDANQTAQEKPQVTH 206
Query: 66 --ESTQPI-QPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-----GDTLWGLSRKYGV 117
+T P+ PP P VT+P K P S T ++V GD LW + RKYGV
Sbjct: 207 PPATTSPVTNPPVNVPPVTQPL----KPNPPLTSTPTKKVVEYVVKPGDVLWKIGRKYGV 262
Query: 118 SIDAIKEANGLSG-DTIYAGKKLIIP 142
I E N L I G+KL+IP
Sbjct: 263 DWHVIAEYNHLKNPHLILVGQKLLIP 288
>gi|29378419|gb|AAO83911.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 472
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 64 IAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIK 123
+ ++TQ P P+ TK + +K+ A+ TV+ GDT+W LS KYGVS+ I
Sbjct: 176 VKQTTQATTPAPKAA-ETKETPVVDKN----ATTHTVK--SGDTIWALSVKYGVSVQDIM 228
Query: 124 EANGLSGDTIYAGKKLII 141
N LS +IY G+KL I
Sbjct: 229 SWNNLSSSSIYVGQKLAI 246
>gi|347014911|gb|AEO72009.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 472
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEP---EPASCRTVEIVRGDTLW 109
K T Q P AE+ ++ Q P K P + A+ TV+ GDT+W
Sbjct: 158 KKEATTEQAAPAAETKTEVKQTTQ-ATTPAPKAAETKETPVVDQNATTHTVK--SGDTIW 214
Query: 110 GLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
LS KYGVS+ I N LS +IY G+KL I
Sbjct: 215 ALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 246
>gi|347014909|gb|AEO72008.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 472
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P K P T V+ GDT W L
Sbjct: 158 KKEATTEQAAPAAETKTEVKQTTQ-ATTPAPKAAETKETPVVDKNATTHTVKSGDTFWAL 216
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 217 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 246
>gi|290892782|ref|ZP_06555773.1| invasion associated protein p60 [Listeria monocytogenes FSL J2-071]
gi|404407044|ref|YP_006689759.1| cell wall hydrolases A [Listeria monocytogenes SLCC2376]
gi|290557594|gb|EFD91117.1| invasion associated protein p60 [Listeria monocytogenes FSL J2-071]
gi|404241193|emb|CBY62593.1| cell wall hydrolases A, LysM domain [Listeria monocytogenes
SLCC2376]
Length = 472
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEP---EPASCRTVEIVRGDTLW 109
K T Q P AE+ ++ Q P K P + A+ TV+ GDT+W
Sbjct: 158 KKEATTEQAAPAAETKTEVKQTTQ-ATTPAPKAAETKETPVVDQNATTHTVK--SGDTIW 214
Query: 110 GLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
LS KYGVS+ I N LS +IY G+KL I
Sbjct: 215 ALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 246
>gi|227508672|ref|ZP_03938721.1| peptidoglycan-binding protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227191857|gb|EEI71924.1| peptidoglycan-binding protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 196
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT-IYAGKKLIIP 142
V I GDT+WGLS+KY VS++AI +AN LS + I AG+K+ IP
Sbjct: 26 VTIQSGDTVWGLSQKYNVSVEAINQANNLSNSSVIIAGEKINIP 69
>gi|423598926|ref|ZP_17574926.1| hypothetical protein III_01728 [Bacillus cereus VD078]
gi|401237196|gb|EJR43653.1| hypothetical protein III_01728 [Bacillus cereus VD078]
Length = 265
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 27 EASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGKDQTFIGEQLHIP 74
>gi|386007310|ref|YP_005925588.1| cell wall hydrolases A [Listeria monocytogenes L99]
gi|66737332|gb|AAY54612.1| Iap [Listeria monocytogenes]
gi|307570120|emb|CAR83299.1| cell wall hydrolases A [Listeria monocytogenes L99]
Length = 472
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 71
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 64 IAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIK 123
+ ++TQ P P+ TK + +K+ A+ TV+ GDT+W LS KYGVS+ I
Sbjct: 176 VKQTTQATTPAPKAA-ETKETPVVDKN----ATTHTVK--SGDTIWALSVKYGVSVQDIM 228
Query: 124 EANGLSGDTIYAGKKLII 141
N LS +IY G+KL I
Sbjct: 229 SWNNLSSSSIYVGQKLAI 246
>gi|33150074|gb|AAP97053.1| putative LysM domain containing protein [Lactobacillus reuteri DSM
20016]
Length = 164
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
V++ GDT+WG +++Y ++D+I AN L+ + IY G++L+IP
Sbjct: 27 VQVQSGDTVWGFAQQYATTVDSISTANQLADPNVIYVGQQLVIP 70
>gi|255023786|ref|ZP_05295772.1| invasion associated secreted endopeptidase [Listeria monocytogenes
FSL J1-208]
Length = 147
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 67
>gi|114707232|ref|ZP_01440130.1| lipoprotein [Fulvimarina pelagi HTCC2506]
gi|114537428|gb|EAU40554.1| lipoprotein [Fulvimarina pelagi HTCC2506]
Length = 435
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 61 PQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSID 120
P + E Q I P +P T S + +TV + GDTL ++R+ G+S +
Sbjct: 154 PTTLNEQAQRIGSPSPRP-------ATANSNVSGGAGQTVTVQSGDTLSAIARRSGISAE 206
Query: 121 AIKEANGLSGDTIYAGKKLIIP 142
AI+ AN ++GDT+ G++L++P
Sbjct: 207 AIRSANNITGDTVRIGQRLVVP 228
>gi|163941450|ref|YP_001646334.1| cell wall hydrolase SleB [Bacillus weihenstephanensis KBAB4]
gi|423518399|ref|ZP_17494880.1| hypothetical protein IG7_03469 [Bacillus cereus HuA2-4]
gi|163863647|gb|ABY44706.1| cell wall hydrolase SleB [Bacillus weihenstephanensis KBAB4]
gi|401161126|gb|EJQ68494.1| hypothetical protein IG7_03469 [Bacillus cereus HuA2-4]
Length = 265
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 27 EASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGKDQTFIGEQLHIP 74
>gi|258516488|ref|YP_003192710.1| cell wall hydrolase SleB [Desulfotomaculum acetoxidans DSM 771]
gi|257780193|gb|ACV64087.1| cell wall hydrolase SleB [Desulfotomaculum acetoxidans DSM 771]
Length = 208
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
V ++C P A T + RG++L+ +S YG ++D +K ANGL + IY G+KL
Sbjct: 9 VILLALCITVILPSAAFAATHTVSRGESLYQISSWYGTTVDTVKAANGLKDNAIYPGQKL 68
Query: 140 IIP 142
IP
Sbjct: 69 YIP 71
>gi|217965324|ref|YP_002351002.1| invasion associated secreted endopeptidase [Listeria monocytogenes
HCC23]
gi|386025900|ref|YP_005946676.1| invasion associated protein P60 [Listeria monocytogenes M7]
gi|217334594|gb|ACK40388.1| protein p60 (Invasion-associated protein) [Listeria monocytogenes
HCC23]
gi|336022481|gb|AEH91618.1| invasion associated protein P60 [Listeria monocytogenes M7]
Length = 470
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 69
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 41/90 (45%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P K P T V+ GDT+W L
Sbjct: 156 KKEATTEQAAPAAETKTEVKQTTQ-ATTPAPKAAETKETPVVDKNATTHTVKSGDTIWAL 214
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 215 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 244
>gi|29378417|gb|AAO83910.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 452
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 2 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 51
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEP---EPASCRTVEIVRGDTLW 109
K T Q P AE+ ++ Q P K P + A+ TV+ GDT+W
Sbjct: 138 KKEATTEQAAPAAETKTEVKQTTQ-ATTPAPKAAETKETPVVDQNATTHTVK--SGDTIW 194
Query: 110 GLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
LS KYGVS+ I N LS +IY G+KL I
Sbjct: 195 ALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 226
>gi|423488886|ref|ZP_17465568.1| hypothetical protein IEU_03509 [Bacillus cereus BtB2-4]
gi|423494611|ref|ZP_17471255.1| hypothetical protein IEW_03509 [Bacillus cereus CER057]
gi|423498598|ref|ZP_17475215.1| hypothetical protein IEY_01825 [Bacillus cereus CER074]
gi|401151672|gb|EJQ59118.1| hypothetical protein IEW_03509 [Bacillus cereus CER057]
gi|401159256|gb|EJQ66641.1| hypothetical protein IEY_01825 [Bacillus cereus CER074]
gi|402433241|gb|EJV65295.1| hypothetical protein IEU_03509 [Bacillus cereus BtB2-4]
Length = 265
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 27 EASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGKDQTFIGEQLHIP 74
>gi|423367748|ref|ZP_17345180.1| hypothetical protein IC3_02849 [Bacillus cereus VD142]
gi|423592295|ref|ZP_17568326.1| hypothetical protein IIG_01163 [Bacillus cereus VD048]
gi|423661398|ref|ZP_17636567.1| hypothetical protein IKM_01795 [Bacillus cereus VDM022]
gi|401083401|gb|EJP91659.1| hypothetical protein IC3_02849 [Bacillus cereus VD142]
gi|401230537|gb|EJR37044.1| hypothetical protein IIG_01163 [Bacillus cereus VD048]
gi|401301439|gb|EJS07028.1| hypothetical protein IKM_01795 [Bacillus cereus VDM022]
Length = 265
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 27 EASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGKDQTFIGEQLHIP 74
>gi|29378483|gb|AAO83943.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 461
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 137 KKETTTQQAAPAAETKTEVKQTIQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 195
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G+KL I
Sbjct: 196 SVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 225
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 7 ASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 53
>gi|229134570|ref|ZP_04263380.1| Cell wall hydrolase [Bacillus cereus BDRD-ST196]
gi|228648831|gb|EEL04856.1| Cell wall hydrolase [Bacillus cereus BDRD-ST196]
Length = 270
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C + E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 25 VCNQ-GVAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGKDQTFIGEQLHIP 79
>gi|337287764|ref|YP_004627236.1| NLP/P60 protein [Thermodesulfobacterium sp. OPB45]
gi|334901502|gb|AEH22308.1| NLP/P60 protein [Thermodesulfobacterium geofontis OPF15]
Length = 402
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 17/104 (16%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
GI I LK +N L + + Q I ++ + + P++ K I E E
Sbjct: 127 GIPIQELKKINNLKSTKLKVGQTIKIYQNLEKVAKKPEE----KEFIFYEVKE------- 175
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL+ +S ++ VSID IK+ NG+ + I+ G+KL IP
Sbjct: 176 ------GDTLYTISLRHNVSIDLIKDLNGIKDNVIFVGQKLKIP 213
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 104 RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+GDTL+ ++++Y VSI+ +K+ N L ++I G+ L IP
Sbjct: 45 KGDTLYSIAKRYEVSIEELKKINNLQDESISIGQILKIP 83
>gi|29378415|gb|AAO83909.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 451
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P AS TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 1 PTIASASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 50
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 6/92 (6%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEP---EPASCRTVEIVRGDTLW 109
K T Q P AE+ ++ Q P K P + A+ TV+ GDT+W
Sbjct: 137 KKEATTEQAAPAAETKTEVKQTTQ-ATTPAPKAAETKETPVVDQNATTHTVK--SGDTIW 193
Query: 110 GLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
LS KYGVS+ I N LS +IY G+KL I
Sbjct: 194 ALSVKYGVSVQDIMSWNNLSSSSIYVGQKLAI 225
>gi|423469977|ref|ZP_17446721.1| hypothetical protein IEM_01283 [Bacillus cereus BAG6O-2]
gi|402437229|gb|EJV69253.1| hypothetical protein IEM_01283 [Bacillus cereus BAG6O-2]
Length = 265
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 27 EASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGKDQTFIGEQLHIP 74
>gi|373857073|ref|ZP_09599816.1| Peptidoglycan-binding lysin domain protein [Bacillus sp. 1NLA3E]
gi|372453319|gb|EHP26787.1| Peptidoglycan-binding lysin domain protein [Bacillus sp. 1NLA3E]
Length = 322
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 76 QQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYA 135
QQ +V P+ E + T++ +GDTL+ LS+KY VS + + ANGLS D I
Sbjct: 88 QQLLV--PAALHSSHSEEMSGLYTIK--KGDTLYSLSKKYQVSTNLLMVANGLSSDKIKV 143
Query: 136 GKKLIIP 142
G+KL++P
Sbjct: 144 GQKLLVP 150
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 82 KPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
K S+ +E E TV V GD+LWG++ ++GV++D +K AN L D + G+KL I
Sbjct: 203 KISVPSEFHSQEEEEIYTV--VPGDSLWGIASRFGVTVDELKNANVLHHDMVLIGQKLHI 260
Query: 142 P 142
P
Sbjct: 261 P 261
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T + +GDTL+ L++KY S+ +K+AN L D +Y G+K+ +P
Sbjct: 164 TYFVKKGDTLFSLAKKYQTSVIELKKANSLRTDNLYIGQKISVP 207
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 47/91 (51%), Gaps = 5/91 (5%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT-VEIVRGDTLWGL 111
K R + + + Q + +T ++ + K+E +C T + +GDTL+ L
Sbjct: 7 KQRMSEIRKEKMKARNQKMATATVVGAITALALMSTKAE----ACSTDYTVKKGDTLYNL 62
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
S+KY VSI+ + + N L+ + + ++L++P
Sbjct: 63 SKKYQVSINQLMDVNNLTSEKLLINQQLLVP 93
>gi|326804173|ref|YP_004321991.1| N-acetylmuramoyl-L-alanine amidase [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650851|gb|AEA01034.1| N-acetylmuramoyl-L-alanine amidase [Aerococcus urinae
ACS-120-V-Col10a]
Length = 860
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 32/41 (78%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ G++LW ++++YGV++D I++A+GLS +T+Y + L IP
Sbjct: 552 VSHGESLWSIAKRYGVTVDGIRKASGLSSNTLYTNQVLTIP 592
>gi|405756811|ref|YP_006680275.1| N-acetylmuramoyl-L-alanine amidase [Listeria monocytogenes
SLCC2540]
gi|404226011|emb|CBY77373.1| N-acetylmuramoyl-L-alanine amidase, family 4, LysM domain [Listeria
monocytogenes SLCC2540]
Length = 593
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 541 NKPSNSAAKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 592
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 82 KPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKK 138
KPS T S+P + + + +GD+LW ++ V+I +K N L D IY G+K
Sbjct: 387 KPSTGTSTSKPSTGTSTNAKVYTVAKGDSLWRIATNNKVTIANLKSWNNLKSDFIYPGQK 446
Query: 139 LII 141
L +
Sbjct: 447 LKV 449
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 82 KPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKK 138
KPS T S+P + + + +GD+LW ++ V+I +K N L D IY G+K
Sbjct: 462 KPSTGTSTSKPSTGTSTNAKVYTVAKGDSLWRIATNNKVTIANLKSWNNLKSDFIYPGQK 521
Query: 139 LII 141
L +
Sbjct: 522 LKV 524
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ V+I +K N L D IY G+KL +
Sbjct: 328 SNAKIYTVVKGDSLWRIATNNKVTIANLKSWNNLKSDFIYPGQKLKV 374
>gi|390444827|ref|ZP_10232598.1| peptidoglycan-binding lysin domain-containing protein [Nitritalea
halalkaliphila LW7]
gi|389663912|gb|EIM75424.1| peptidoglycan-binding lysin domain-containing protein [Nitritalea
halalkaliphila LW7]
Length = 189
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
Query: 94 PASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDT-IYAGKKLII 141
PA+ RT V+ GDTL+G+SR+YG+S++A+K NG+ D I G++LI+
Sbjct: 137 PANGRTTHTVQQGDTLFGISRQYGISVEALKSWNGIGADNVIRVGQRLIV 186
>gi|229012945|ref|ZP_04170110.1| Cell wall hydrolase [Bacillus mycoides DSM 2048]
gi|229168502|ref|ZP_04296225.1| Cell wall hydrolase [Bacillus cereus AH621]
gi|228614908|gb|EEK72010.1| Cell wall hydrolase [Bacillus cereus AH621]
gi|228748199|gb|EEL98059.1| Cell wall hydrolase [Bacillus mycoides DSM 2048]
Length = 270
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C + E ++ TV+ + DTLWG+S++YGVSI +IK+AN D + G++L IP
Sbjct: 25 VCNQ-GVAEASTIHTVK--KNDTLWGISKQYGVSIQSIKQANNKGKDQTFIGEQLHIP 79
>gi|29378563|gb|AAO83983.1| invasion associated protein p60 [Listeria welshimeri]
Length = 522
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDALKKANNLTSDKIVPGQKLQV 71
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 55 RNETT-QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETT Q P AE+ ++ P T P K+ P + T V+ GDT+W LS
Sbjct: 153 KQETTKQTVPAAETKTEVKQSTPAP--TAPKAAETKTAPVVDTNATTHTVKSGDTIWALS 210
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYG S+ + N LS +IY G+K+ +
Sbjct: 211 VKYGASVQDLMSWNNLSSSSIYVGQKIAV 239
>gi|149659|gb|AAA25281.1| p60-related protein [Listeria welshimeri]
Length = 524
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDALKKANNLTSDKIVPGQKLQV 71
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 55 RNETT-QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETT Q P AE+ ++ P T P K+ P + T V+ GDT+W LS
Sbjct: 153 KQETTKQTAPAAETKTEVKQSTPAP--TAPKAAETKTAPVVDTNATTHTVKSGDTIWALS 210
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYG S+ + N LS +IY G+K+ +
Sbjct: 211 VKYGASVQDLMSWNNLSSSSIYVGQKIAV 239
>gi|407069793|ref|ZP_11100631.1| N-acetylmuramoyl-L-alanine amidase [Vibrio cyclitrophicus ZF14]
Length = 573
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R ++ RGD L ++ KYGVS+DAI++AN L D++ G+ LIIP
Sbjct: 526 LRKHKVARGDYLGKIASKYGVSVDAIRKANNLRSDSLAVGQVLIIP 571
>gi|254284397|ref|ZP_04959365.1| N-acetylmuramoyl-L-alanine amidase AmiC [gamma proteobacterium
NOR51-B]
gi|219680600|gb|EED36949.1| N-acetylmuramoyl-L-alanine amidase AmiC [gamma proteobacterium
NOR51-B]
Length = 455
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I RGDTL G+++++ VS+ AIK+ NGL +TI G+KL+IP
Sbjct: 413 IARGDTLSGIAQQFNVSVSAIKDRNGLKSNTIKVGQKLVIP 453
>gi|116871969|ref|YP_848750.1| invasion associated endopeptidase [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|266727|sp|Q01839.1|P60_LISWE RecName: Full=Probable endopeptidase p60; AltName:
Full=Invasion-associated protein p60; Flags: Precursor
gi|149671|gb|AAA25287.1| extracellular protein [Listeria welshimeri]
gi|29378395|gb|AAO83899.1| invasion associated protein p60 [Listeria welshimeri]
gi|116740847|emb|CAK19967.1| P60 extracellular protein, invasion associated protein Iap
[Listeria welshimeri serovar 6b str. SLCC5334]
gi|347014927|gb|AEO72017.1| invasion associated protein p60 [Listeria welshimeri]
gi|347014929|gb|AEO72018.1| invasion associated protein p60 [Listeria welshimeri]
Length = 524
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDALKKANNLTSDKIVPGQKLQV 71
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 55 RNETT-QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETT Q P AE+ ++ P T P K+ P + T V+ GDT+W LS
Sbjct: 153 KQETTKQTAPAAETKTEVKQSTPAP--TAPKAAETKTAPVVDTNATTHTVKSGDTIWALS 210
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYG S+ + N LS +IY G+K+ +
Sbjct: 211 VKYGASVQDLMSWNNLSSSSIYVGQKIAV 239
>gi|347014925|gb|AEO72016.1| invasion associated protein p60 [Listeria welshimeri]
Length = 524
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDALKKANNLTSDKIVPGQKLQV 71
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 55 RNETT-QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETT Q P AE+ ++ P T P K+ P + T V+ GDT+W LS
Sbjct: 153 KQETTKQTAPAAETKTEVKQSTPAP--TAPKAAGTKTAPVVDTNATTHTVKSGDTIWALS 210
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYG S+ + N LS +IY G+K+ +
Sbjct: 211 VKYGASVQDLMSWNNLSSSSIYVGQKIAV 239
>gi|30314069|gb|AAO47060.1| invasion-associated protein p60 [Listeria monocytogenes]
Length = 231
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 64 IAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIK 123
+ ++TQ P P+ TK + +K+ A+ TV+ GDT+W LS KYGVS+ I
Sbjct: 125 VKQTTQATTPAPK-AAETKETPVVDKN----ATTHTVK--SGDTIWALSVKYGVSVQDIM 177
Query: 124 EANGLSGDTIYAGKKLII 141
N LS +IY G+KL I
Sbjct: 178 SWNNLSSSSIYVGQKLAI 195
>gi|417318730|ref|ZP_12105295.1| autolysin [Listeria monocytogenes J1-220]
gi|328469551|gb|EGF40492.1| autolysin [Listeria monocytogenes J1-220]
Length = 417
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 365 NKPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 416
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ + V+I +K N L D IY G
Sbjct: 211 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 270
Query: 137 KKLII 141
+KL +
Sbjct: 271 QKLKV 275
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ + V+I +K N L D IY G
Sbjct: 285 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 344
Query: 137 KKLII 141
+KL +
Sbjct: 345 QKLKV 349
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V++ +K N L D IY G+KL +
Sbjct: 152 NTSNAKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKV 200
>gi|289578182|ref|YP_003476809.1| cell wall hydrolase SleB [Thermoanaerobacter italicus Ab9]
gi|289527895|gb|ADD02247.1| cell wall hydrolase SleB [Thermoanaerobacter italicus Ab9]
Length = 266
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P S T + +GD+L+ +++KYG+++D +K ANG D IY G+ IIP
Sbjct: 72 PGSDNTYVVQKGDSLYLIAKKYGITVDMLKSANGYKSDIIYPGQVFIIP 120
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTLWG+S+KYG + + NGL IY G+ L +P
Sbjct: 35 GDTLWGISQKYGTTYTKLMALNGLQSTIIYPGQVLQVP 72
>gi|29378397|gb|AAO83900.1| invasion associated protein p60 [Listeria welshimeri]
Length = 524
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQSKGTTVDALKKANNLTSDKIVPGQKLQV 71
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 4/89 (4%)
Query: 55 RNETT-QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLS 112
+ ETT Q P AE+ ++ P T P K+ P + T V+ GDT+W LS
Sbjct: 153 KQETTKQTAPAAETKTEVKQSTPAP--TAPKAAETKTAPVVDTNATTHTVKSGDTMWALS 210
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYG S+ + N LS +IY G+K+ +
Sbjct: 211 VKYGASVQDLMSWNNLSSSSIYVGQKIAV 239
>gi|417313902|ref|ZP_12100608.1| autolysin [Listeria monocytogenes J1816]
gi|328468173|gb|EGF39179.1| autolysin [Listeria monocytogenes J1816]
Length = 417
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 365 NKPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 416
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ + V+I +K N L D IY G
Sbjct: 211 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 270
Query: 137 KKLII 141
+KL +
Sbjct: 271 QKLKV 275
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ + V+I +K N L D IY G
Sbjct: 285 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPG 344
Query: 137 KKLII 141
+KL +
Sbjct: 345 QKLKV 349
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V++ +K N L D IY G+KL +
Sbjct: 152 NTSNAKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKV 200
>gi|319653282|ref|ZP_08007384.1| hypothetical protein HMPREF1013_03999 [Bacillus sp. 2_A_57_CT2]
gi|317395203|gb|EFV75939.1| hypothetical protein HMPREF1013_03999 [Bacillus sp. 2_A_57_CT2]
Length = 328
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GDTLWG++R +G+S+ +K NG+S DTIY G+KL
Sbjct: 96 GDTLWGIARTHGLSVSTLKSLNGISSDTIYPGQKL 130
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 22/129 (17%)
Query: 15 AENDGSGDGREAAVAKTA----GFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQP 70
A GS G + K+ G G+++S LK+LN + S+
Sbjct: 79 ASTGGSSGGTVSYTVKSGDTLWGIARTHGLSVSTLKSLNGI---------------SSDT 123
Query: 71 IQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG 130
I P + + +I + PAS + I RGDTL G++ ++ +S+ +K N LS
Sbjct: 124 IYPGQKLKVKGSANIA---APSAPASTGSYTIKRGDTLSGIASRHNLSVSQLKAMNNLSS 180
Query: 131 DTIYAGKKL 139
D IYAG+ L
Sbjct: 181 DLIYAGQTL 189
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+SR +SI+ +K N +SG IY G+ L +
Sbjct: 35 GDTLWGISRSNNLSIEELKTWNNISGSIIYKGQALTL 71
>gi|297544463|ref|YP_003676765.1| cell wall hydrolase SleB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296842238|gb|ADH60754.1| cell wall hydrolase SleB [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 266
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 33/49 (67%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P S T + +GD+L+ +++KYG+++D +K ANG D IY G+ IIP
Sbjct: 72 PGSDNTYVVQKGDSLYLIAKKYGITVDMLKSANGYKSDIIYPGQVFIIP 120
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 24/38 (63%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTLWG+S++YG + + NGL IY G+ L +P
Sbjct: 35 GDTLWGISQRYGTTYTKLMALNGLQSTIIYPGQVLQVP 72
>gi|423682539|ref|ZP_17657378.1| peptidoglycan-binding protein [Bacillus licheniformis WX-02]
gi|383439313|gb|EID47088.1| peptidoglycan-binding protein [Bacillus licheniformis WX-02]
Length = 268
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS + V + +GDTLWG+S+K GV++ +KE N LS D I G+KL
Sbjct: 23 ASAKEVTVQKGDTLWGISQKQGVNLQDLKEWNQLSSDLIIPGQKL 67
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
SE + + I +GDTLW +++K+GVS++ +K N + D IY
Sbjct: 70 SEKQTEEKKQYTIKKGDTLWKIAQKFGVSVNDLKNWNNIKSDIIY 114
>gi|29378517|gb|AAO83960.1| invasion associated protein p60 [Listeria monocytogenes]
Length = 448
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGL 111
K T Q P AE+ ++ Q P + K P T V+ GDT+W L
Sbjct: 124 KKETTTQQAAPAAETKTEVKQTTQ-ATTPAPKVAETKETPVVDQNATTHAVKSGDTIWAL 182
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S KYGVS+ I N LS +IY G++L I
Sbjct: 183 SVKYGVSVQDIMSWNNLSSSSIYVGQRLAI 212
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 4 GDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 40
>gi|398311067|ref|ZP_10514541.1| endopeptidase LytF [Bacillus mojavensis RO-H-1]
Length = 411
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA +T+++ GD+LW LSR+Y SI A+K N L +Y G+ L +P
Sbjct: 23 PADAKTIKVKSGDSLWKLSRQYHTSISALKSENKLKSSMLYVGQSLKVP 71
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GD+LW ++ + GV++ +I++ N LS D + G+ L I
Sbjct: 226 TYKVKSGDSLWKIANQLGVTVQSIRDRNNLSSDVLRIGQILTI 268
>gi|403234374|ref|ZP_10912960.1| cell wall hydrolase SleB [Bacillus sp. 10403023]
Length = 458
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 27/143 (18%)
Query: 7 SVPTPRVPAENDGSGDGREAAVAKT--AGFVVFS-----GIAISILKALNPLNKNRNETT 59
++PT + A + ++A T AG ++S G + +K N L+ +R +
Sbjct: 80 TLPTHKASAAKNKMDHSHTTSLAYTVTAGDTLYSIAQHYGTTVDAIKQANQLSSDRLQIG 139
Query: 60 QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSI 119
Q ++T PS + S P + T ++V GDTL+ ++ + G ++
Sbjct: 140 Q------------------VLTIPSGIS--SAPIQTAETTYQVVAGDTLYRIANQNGTTV 179
Query: 120 DAIKEANGLSGDTIYAGKKLIIP 142
DAIK+AN LS D + G+ LIIP
Sbjct: 180 DAIKKANQLSSDILQVGQTLIIP 202
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T ++V GDTL+ ++ + G+++DAIK+AN LS D + G+ L IP
Sbjct: 273 TYQVVSGDTLYSIATRNGITVDAIKKANQLSSDLLSLGQTLAIP 316
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 88 EKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E + P + T ++ GDTL+ ++++ G S++AIK+AN LS + + G++L IP
Sbjct: 205 ETTAPTQNNETTYQVDPGDTLYSIAQRNGTSVEAIKKANNLSSNFLEIGQELTIP 259
>gi|312623123|ref|YP_004024736.1| peptidoglycan-binding lysin domain [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203590|gb|ADQ46917.1| Peptidoglycan-binding lysin domain [Caldicellulosiruptor
kronotskyensis 2002]
Length = 507
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/37 (56%), Positives = 29/37 (78%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW LS+ +G SI+AIK N L+ DT+Y G+KLI+
Sbjct: 162 GDSLWILSQTFGTSIEAIKSFNNLTNDTLYVGQKLIV 198
Score = 35.8 bits (81), Expect = 6.4, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT-IYAGKKLIIP 142
++ GDT+W +S K+G+ + AN L+ ++ IYAG+ L +P
Sbjct: 299 KVQNGDTIWSISVKFGIPDYELMSANNLNQNSYIYAGQTLKVP 341
>gi|298531013|ref|ZP_07018414.1| Lytic transglycosylase catalytic [Desulfonatronospira thiodismutans
ASO3-1]
gi|298509036|gb|EFI32941.1| Lytic transglycosylase catalytic [Desulfonatronospira thiodismutans
ASO3-1]
Length = 589
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E+ GDTLW +SRK+ V + + ANGLSG+TI G+KL IP
Sbjct: 429 EVQSGDTLWDISRKFNVEMQTLIAANGLSGNTIRPGQKLYIP 470
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 32/44 (72%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T + GDTLW ++RK+ V +D ++ ANGLSG+TI G++L IP
Sbjct: 487 TYSVSSGDTLWEIARKFNVGMDDLRNANGLSGNTIRPGQELDIP 530
>gi|297569657|ref|YP_003691001.1| Lytic transglycosylase catalytic [Desulfurivibrio alkaliphilus
AHT2]
gi|296925572|gb|ADH86382.1| Lytic transglycosylase catalytic [Desulfurivibrio alkaliphilus
AHT2]
Length = 585
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSI---CTEKSEPEPA 95
G++I L A N ++ R Q +A +P P ++P++ E+S+PE
Sbjct: 480 GVSIDTLAAWNDISDPRR-IRAGQQLALYLKP--APGEKPVLAASGSKQPAGEQSQPE-- 534
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ GDTLW ++RK+ + + I++ N L+GD I+ GKKL+I
Sbjct: 535 -VTYYQVQGGDTLWSIARKFQTTAEMIRQWNQLNGDLIHPGKKLLI 579
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 45 LKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR 104
L L+ LN+ P A T + +Q + K +E E RT + R
Sbjct: 339 LDELHDLNRQLRRLVTPPEQANYTLRLPQGSKQQVAAKLPRVRAVAEVE---YRTHVVRR 395
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL G+ +Y ++ + +AN L + + G++L IP
Sbjct: 396 GDTLTGICNRYNINKTTLLKANSLRSEQLIIGQRLRIP 433
>gi|395786057|ref|ZP_10465785.1| hypothetical protein ME5_01103 [Bartonella tamiae Th239]
gi|423717049|ref|ZP_17691239.1| hypothetical protein MEG_00779 [Bartonella tamiae Th307]
gi|395424515|gb|EJF90702.1| hypothetical protein ME5_01103 [Bartonella tamiae Th239]
gi|395427838|gb|EJF93921.1| hypothetical protein MEG_00779 [Bartonella tamiae Th307]
Length = 387
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Query: 60 QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSI 119
QP +A + Q + QQ + T P+ T+ S A T + GDTL+ +SRK G S+
Sbjct: 109 QPTQVASAGQAM-GQGQQTLGTMPASTTQIS----AKSGTYVVQSGDTLYSVSRKTGASV 163
Query: 120 DAIKEANGLSGDTIYAGKKLIIP 142
++I ANGL+ I G+ LIIP
Sbjct: 164 NSISTANGLTNGGIRVGQSLIIP 186
>gi|225009995|ref|ZP_03700467.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Flavobacteria bacterium MS024-3C]
gi|225005474|gb|EEG43424.1| Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase
[Flavobacteria bacterium MS024-3C]
Length = 274
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 33/46 (71%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S R ++ +GDTL+G+S+KYG+S+D +K+ NGL + I G LII
Sbjct: 226 SDRIHQVQKGDTLFGISKKYGLSVDTLKKINGLKNNDIQVGTSLII 271
>gi|401555555|gb|AFP94053.1| invasion associated protein, partial [Listeria monocytogenes]
Length = 219
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P S TV + GDTLWG+++ G ++DAIK+AN L+ D I G+KL
Sbjct: 7 PTITSASTVVVEAGDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKL 54
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 12/83 (14%)
Query: 59 TQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVE------------IVRGD 106
T Q + + Q P T+ T+ + P P + T E + GD
Sbjct: 137 TTTQEVKKEATTEQAAPAAETKTEVKQTTQATTPAPKAAETKETPVVDQNATTHTVKSGD 196
Query: 107 TLWGLSRKYGVSIDAIKEANGLS 129
T+W LS KYGVS+ I N LS
Sbjct: 197 TIWALSVKYGVSVQDIMSWNNLS 219
>gi|389822141|ref|ZP_10210092.1| N-acetylmuramoyl-L-alanine amidase (Autolysine) [Planococcus
antarcticus DSM 14505]
gi|388462468|gb|EIM04917.1| N-acetylmuramoyl-L-alanine amidase (Autolysine) [Planococcus
antarcticus DSM 14505]
Length = 254
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ GDTLWG+SR YGV ++ I+ N L D I G+KLI+
Sbjct: 132 VIAGDTLWGISRTYGVKVEDIRTWNNLKSDVIIIGQKLIV 171
>gi|52080583|ref|YP_079374.1| peptidoglycan-binding protein [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319645453|ref|ZP_07999685.1| YocH protein [Bacillus sp. BT1B_CT2]
gi|404489469|ref|YP_006713575.1| peptidoglycan hydrolase YocH [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52003794|gb|AAU23736.1| Peptidoglycan-binding protein [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|52348463|gb|AAU41097.1| putative peptidoglycan hydrolase YocH [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|317392339|gb|EFV73134.1| YocH protein [Bacillus sp. BT1B_CT2]
Length = 268
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS + V + +GDTLWG+S+K GV++ +KE N LS D I G+KL
Sbjct: 23 ASAKEVTVQKGDTLWGISQKQGVNLQDLKEWNQLSSDLIIPGQKL 67
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
SE + + I +GDTLW +++K+GVS++ +K N + D IY
Sbjct: 70 SEKQTEEKKQYTIKKGDTLWKIAQKFGVSVNDLKNWNNIKSDIIY 114
>gi|269219434|ref|ZP_06163288.1| putative LysM domain protein [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269211130|gb|EEZ77470.1| putative LysM domain protein [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 348
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
EP+S + + RGDTL G++R++G ++ AI +ANG++ IYAGK L IP
Sbjct: 126 EPSSSLSHTVQRGDTLSGIARQHGTTVAAIAQANGIADPARIYAGKTLTIP 176
>gi|357049789|ref|ZP_09111004.1| hypothetical protein HMPREF9478_00987 [Enterococcus saccharolyticus
30_1]
gi|355382723|gb|EHG29819.1| hypothetical protein HMPREF9478_00987 [Enterococcus saccharolyticus
30_1]
Length = 613
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTLWG+++ YGVSI+ + + N +SG I+ G++LI+
Sbjct: 575 GDTLWGIAQSYGVSINQLMQWNNISGSLIFVGQRLIVS 612
>gi|257868908|ref|ZP_05648561.1| autolysin [Enterococcus gallinarum EG2]
gi|257803072|gb|EEV31894.1| autolysin [Enterococcus gallinarum EG2]
Length = 613
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTLWG+++ YGVSI+ + + N +SG I+ G++LI+
Sbjct: 575 GDTLWGIAQSYGVSINQLMQWNNISGSLIFVGQRLIVS 612
>gi|15615442|ref|NP_243745.1| spore cortex-lytic enzyme [Bacillus halodurans C-125]
gi|10175501|dbj|BAB06598.1| spore cortex-lytic enzyme [Bacillus halodurans C-125]
Length = 195
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 79 IVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKK 138
I+ ++ T K+E AS ++ GDTL+ LS +YGV ++AIK N S +TIY G++
Sbjct: 11 IILSFTLFTNKAE---ASHSKHQVQSGDTLYLLSEQYGVPMEAIKRINERSSNTIYRGEQ 67
Query: 139 LIIP 142
L IP
Sbjct: 68 LTIP 71
>gi|302388639|ref|YP_003824460.1| spore coat assembly protein SafA [Thermosediminibacter oceani DSM
16646]
gi|302199267|gb|ADL06837.1| spore coat assembly protein SafA [Thermosediminibacter oceani DSM
16646]
Length = 540
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 99 TVEIV-RGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
T+ IV +GDTLW ++++Y V+++AI +AN L D IY G++LIIP
Sbjct: 491 TIYIVQKGDTLWKIAKRYNVTLEAIIQANNLENPDLIYPGQRLIIP 536
>gi|335040114|ref|ZP_08533251.1| NLP/P60 protein [Caldalkalibacillus thermarum TA2.A1]
gi|334180008|gb|EGL82636.1| NLP/P60 protein [Caldalkalibacillus thermarum TA2.A1]
Length = 334
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 91 EPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E +P S T ++ GD+LW ++R+Y S++ +K N L+ DTIY G+ L +P
Sbjct: 151 ESKPVSATTYKVKPGDSLWKIAREYNTSVNQLKALNKLTSDTIYVGQVLKVP 202
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S+ AS T + RGD+LW +SR+Y V+I+ + N L TIY G++L I
Sbjct: 20 SKDTEASGGTYTVKRGDSLWKISRQYQVTIEQLMAWNNLRSSTIYVGQRLYI 71
>gi|406987517|gb|EKE07851.1| hypothetical protein ACD_17C00499G0002 [uncultured bacterium]
Length = 384
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 70 PIQPPPQQPIVTKPSICTEKSEPEP-------ASCRTVEIVRGDTLWGLSRKYGVSIDAI 122
PIQP + ++ K S +K+ P SC V + G+TLW +SR Y V ++ I
Sbjct: 304 PIQPIDHKTVLAKFSFGEDKASAPPPVQTAPAVSCYHV-VGEGETLWKISRTYKVKVEEI 362
Query: 123 KEANGLSGDTIYAGKKLIIP 142
+ NGL D +Y G L +P
Sbjct: 363 VQLNGLEKDALYPGMTLKLP 382
>gi|147677358|ref|YP_001211573.1| hypothetical protein PTH_1023 [Pelotomaculum thermopropionicum SI]
gi|146273455|dbj|BAF59204.1| hypothetical protein PTH_1023 [Pelotomaculum thermopropionicum SI]
Length = 301
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 48/104 (46%), Gaps = 16/104 (15%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G + LK LN LN + + Q I P +P Q S +C
Sbjct: 53 GTTVETLKELNGLNSDFIQVGQNLII-----PGEPSSAQDNYGSNS---------ATACY 98
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
TV GD LW ++ K G +++AIKEANGL D + G+ L+IP
Sbjct: 99 TV--TSGDCLWLIASKTGTTVEAIKEANGLESDMLQVGQVLVIP 140
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
A T + GD LW ++ +YG +++ +KE NGL+ D I G+ LIIP
Sbjct: 32 AGSFTYTVAEGDCLWLIAGRYGTTVETLKELNGLNSDFIQVGQNLIIP 79
>gi|325282959|ref|YP_004255500.1| NLP/P60 protein [Deinococcus proteolyticus MRP]
gi|324314768|gb|ADY25883.1| NLP/P60 protein [Deinococcus proteolyticus MRP]
Length = 305
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 33/42 (78%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++V+GDTL+ L+R GV+++A++ AN LSGDTI G+ L +P
Sbjct: 83 QVVKGDTLYSLARTNGVTVEALQSANSLSGDTIEIGQWLAVP 124
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S + + RGDT + L+R+YG+S+ + E NGLS + G+ L
Sbjct: 31 SYNEITVQRGDTAYSLAREYGLSVPQLLELNGLSTHDLEVGQVL 74
>gi|294499041|ref|YP_003562741.1| peptidoglycan-binding protein [Bacillus megaterium QM B1551]
gi|294348978|gb|ADE69307.1| peptidoglycan-binding protein [Bacillus megaterium QM B1551]
Length = 337
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 38 SGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASC 97
+G ++ LK N L+ + Q I+ T + P P+ K + ++ P P++
Sbjct: 107 NGTSVQQLKKWNNLSSHLIYVNQVLKIS-GTGTVSSSPSAPVQEKTN--ETQASPAPSNS 163
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
++ ++ GDT+W +++++G+SI +K+ N LS +TIY + L
Sbjct: 164 KSYKVQPGDTMWSVAQRHGISISQLKQWNNLSSNTIYINQVL 205
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ A T ++ G+TL+ +S+++ V+++ +K+ NGLS IYA + L I
Sbjct: 19 ADAASADTDTHKVKAGETLFSISQQHNVTVEDLKKWNGLSSTLIYANQTLQI 70
>gi|269929406|ref|YP_003321727.1| Lytic transglycosylase catalytic [Sphaerobacter thermophilus DSM
20745]
gi|269788763|gb|ACZ40905.1| Lytic transglycosylase catalytic [Sphaerobacter thermophilus DSM
20745]
Length = 299
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 81 TKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKL 139
T + S P A+ R I+ G+TL G++ YGV+IDAI +ANG++ D IYAG++L
Sbjct: 15 TMAATALLGSLPVSAAQRHT-IMVGETLTGIAAAYGVTIDAIAQANGIANVDLIYAGQQL 73
Query: 140 IIP 142
IIP
Sbjct: 74 IIP 76
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT--IYAGKKLIIP 142
EPA T I GDTLW ++ G+++DAI AN D IYAG L +P
Sbjct: 94 EPAPTETYTIQPGDTLWSIAVARGLTVDAILAANPAISDANRIYAGHTLTLP 145
>gi|321314666|ref|YP_004206953.1| cell wall hydrolase [Bacillus subtilis BSn5]
gi|320020940|gb|ADV95926.1| cell wall hydrolase; phosphatase-associated protein (major
autolysin) [Bacillus subtilis BSn5]
Length = 334
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +++++ +GDTLW LSRKY +I IK N L D IY G+ L I
Sbjct: 22 AASAQSIKVKKGDTLWDLSRKYDTTISKIKSENHLRSDIIYVGQTLSI 69
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
++ GD+LW +S+KYG++I+ +K+ NGL D + G+ L
Sbjct: 89 KVKSGDSLWKISKKYGMTINELKKLNGLKSDLLRVGQVL 127
>gi|255767222|ref|NP_388823.2| cell wall hydrolase [Bacillus subtilis subsp. subtilis str. 168]
gi|402775166|ref|YP_006629110.1| cell wall hydrolase [Bacillus subtilis QB928]
gi|428278452|ref|YP_005560187.1| cell wall hydrolase CWBP33 [Bacillus subtilis subsp. natto BEST195]
gi|430759277|ref|YP_007210355.1| Endopeptidase LytE [Bacillus subtilis subsp. subtilis str. BSP1]
gi|449093642|ref|YP_007426133.1| cell wall hydrolase; phosphatase-associated protein [Bacillus
subtilis XF-1]
gi|452913956|ref|ZP_21962583.1| putative endopeptidase lytE [Bacillus subtilis MB73/2]
gi|1709577|sp|P54421.1|LYTE_BACSU RecName: Full=Probable peptidoglycan endopeptidase LytE; AltName:
Full=Cell wall-associated polypeptide CWBP33; AltName:
Full=Gamma-D-glutamate-meso-diaminopimelate
muropeptidase LytE; AltName: Full=Minor autolysin LytE;
AltName: Full=Phosphatase-associated protein PapQ;
AltName: Full=Vegetative cell wall hydrolase LytE;
Flags: Precursor
gi|1488662|gb|AAC25975.1| phosphatase-associated protein [Bacillus subtilis subsp. subtilis
str. 168]
gi|225184849|emb|CAB12781.2| cell wall hydrolase; phosphatase-associated protein (major
autolysin) [Bacillus subtilis subsp. subtilis str. 168]
gi|291483409|dbj|BAI84484.1| cell wall hydrolase CWBP33 [Bacillus subtilis subsp. natto BEST195]
gi|402480350|gb|AFQ56859.1| Cell wall hydrolase [Bacillus subtilis QB928]
gi|407956623|dbj|BAM49863.1| cell wall hydrolase [Bacillus subtilis BEST7613]
gi|407963893|dbj|BAM57132.1| cell wall hydrolase [Bacillus subtilis BEST7003]
gi|430023797|gb|AGA24403.1| Endopeptidase LytE [Bacillus subtilis subsp. subtilis str. BSP1]
gi|449027557|gb|AGE62796.1| cell wall hydrolase; phosphatase-associated protein [Bacillus
subtilis XF-1]
gi|452116376|gb|EME06771.1| putative endopeptidase lytE [Bacillus subtilis MB73/2]
Length = 334
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +++++ +GDTLW LSRKY +I IK N L D IY G+ L I
Sbjct: 22 AASAQSIKVKKGDTLWDLSRKYDTTISKIKSENHLRSDIIYVGQTLSI 69
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
++ GD+LW +S+KYG++I+ +K+ NGL D + G+ L
Sbjct: 89 KVKSGDSLWKISKKYGMTINELKKLNGLKSDLLRVGQVL 127
>gi|418033967|ref|ZP_12672444.1| cell wall hydrolase [Bacillus subtilis subsp. subtilis str. SC-8]
gi|351470115|gb|EHA30291.1| cell wall hydrolase [Bacillus subtilis subsp. subtilis str. SC-8]
Length = 338
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +++++ +GDTLW LSRKY +I IK N L D IY G+ L I
Sbjct: 22 AASAQSIKVKKGDTLWDLSRKYDTTISKIKSENHLRSDIIYVGQTLSI 69
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
++ GD+LW +S+KYG++I+ +K+ NGL D + G+ L
Sbjct: 93 KVKSGDSLWKISKKYGMTINELKKLNGLKSDLLRVGQVL 131
>gi|384174630|ref|YP_005556015.1| endopeptidase LytF [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|349593854|gb|AEP90041.1| endopeptidase LytF [Bacillus subtilis subsp. subtilis str. RO-NN-1]
Length = 335
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +++++ +GDTLW LSRKY +I IK N L D IY G+ L I
Sbjct: 22 AASAQSIKVKKGDTLWDLSRKYDTTISKIKSENHLRSDIIYVGQTLSI 69
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
++ GD+LW +S+KYG++I+ +K+ NGL D + G+ L
Sbjct: 89 KVKSGDSLWKISKKYGMTINELKKLNGLKSDLLRVGQVL 127
>gi|328950722|ref|YP_004368057.1| rare lipoprotein A [Marinithermus hydrothermalis DSM 14884]
gi|328451046|gb|AEB11947.1| rare lipoprotein A [Marinithermus hydrothermalis DSM 14884]
Length = 178
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL+ L+R++G ++ A++ AN L G TIYAG+ L+IP
Sbjct: 30 GDTLYSLARRFGTTVAALQAANHLEGTTIYAGQVLVIP 67
>gi|375089639|ref|ZP_09735964.1| hypothetical protein HMPREF9708_00354 [Facklamia languida CCUG
37842]
gi|374566486|gb|EHR37725.1| hypothetical protein HMPREF9708_00354 [Facklamia languida CCUG
37842]
Length = 696
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 37 FSGIAISILKALNPLNKN------RNETTQPQPIAESTQPIQP--PPQQPIVTKPSICTE 88
G+ I+ LK +N L N R + + A QP +P P ++P +P +
Sbjct: 147 HHGMTITQLKQVNGLRSNMIHPGDRLKVVKEAQSATRLQPSRPANPSERP--AQPRLTET 204
Query: 89 KSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S P + V+ GD+LW +S KYG++I+ +K NGL+ + I+ G KL +
Sbjct: 205 PSNPSNRTQTVYYTVKPGDSLWLISNKYGLTINELKRLNGLTSNMIHPGNKLRV 258
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%), Gaps = 2/61 (3%)
Query: 81 TKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLI 140
++PS+ E + P P + T + GD+LW ++ +G++I +K+ NGL + I+ G +L
Sbjct: 116 SQPSV--ESTTPRPMTQGTYTVRPGDSLWAIANHHGMTITQLKQVNGLRSNMIHPGDRLK 173
Query: 141 I 141
+
Sbjct: 174 V 174
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 24/120 (20%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPP-----------------QQPIVT 81
G+ I+ LK LN L N + +S P QP QPI
Sbjct: 233 GLTINELKRLNGLTSNMIHPGNKLRVGKSEAPAQPSQPVQPTPTPQPEDKDESVNQPI-- 290
Query: 82 KPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
PS ++P + + + GD LW ++ + +S+ +K N L+ + IYAG +LI+
Sbjct: 291 -PS----PAQPREQATKYYTVQSGDYLWKIANDHHISVAQLKAWNNLTSNYIYAGNRLIV 345
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 27/37 (72%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW ++ ++GV+I+ IK N ++ + I+ G +L++
Sbjct: 387 GDSLWKIANQFGVTINQIKAWNRMTSNMIHPGDRLLV 423
>gi|350265211|ref|YP_004876518.1| endopeptidase LytF [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349598098|gb|AEP85886.1| endopeptidase LytF [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 337
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +++++ +GDTLW LSRKY +I IK N L D IY G+ L I
Sbjct: 22 AASAQSIKVKKGDTLWDLSRKYDTTISKIKSENNLRSDIIYVGQTLSI 69
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LW +S+KYG++++ +K+ NGL D + G+ L
Sbjct: 92 GDSLWKISKKYGMTVNELKKLNGLKSDLLRIGQVL 126
>gi|312134470|ref|YP_004001808.1| peptidoglycan-binding lysin domain-containing protein
[Caldicellulosiruptor owensensis OL]
gi|311774521|gb|ADQ04008.1| Peptidoglycan-binding lysin domain protein [Caldicellulosiruptor
owensensis OL]
Length = 507
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW LS+ +G SIDAIK N L+ +T+Y G+K+I+
Sbjct: 162 GDSLWILSQTFGTSIDAIKSLNSLTSNTLYVGQKIIV 198
>gi|296332361|ref|ZP_06874822.1| cell wall hydrolase; phosphatase-associated protein (major
autolysin) [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305673642|ref|YP_003865314.1| cell wall hydrolase [Bacillus subtilis subsp. spizizenii str. W23]
gi|296150279|gb|EFG91167.1| cell wall hydrolase; phosphatase-associated protein (major
autolysin) [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411886|gb|ADM37005.1| cell wall hydrolase; phosphatase-associated protein (major
autolysin) [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 337
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +++++ +GDTLW LSRKY +I IK N L D IY G+ L I
Sbjct: 22 AASAQSIKVKKGDTLWDLSRKYDTTISKIKSENNLRSDIIYVGQTLSI 69
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LW +S+KYG+++ +K+ NGL D + G+ L
Sbjct: 92 GDSLWKISKKYGMTVSELKKLNGLKSDLLRIGQVL 126
>gi|254495116|ref|ZP_05108040.1| N-acetylmuramidase precursor [Polaribacter sp. MED152]
gi|85819466|gb|EAQ40623.1| N-acetylmuramidase precursor [Polaribacter sp. MED152]
Length = 283
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 66 ESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEA 125
+ T+ I+ TKP + E S E+ +G+TL+ +SRKYG+S+ +K+
Sbjct: 212 KYTKEIKKLNDGETFTKPIVI------EKKSSNIHEVKKGETLYSISRKYGISVQLLKKI 265
Query: 126 NGLSGDTIYAGKKLII 141
N LS +TI G++LII
Sbjct: 266 NNLSSNTIAIGQQLII 281
>gi|386757617|ref|YP_006230833.1| cell wall hydrolase [Bacillus sp. JS]
gi|384930899|gb|AFI27577.1| cell wall hydrolase [Bacillus sp. JS]
Length = 336
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS +++++ +GDTLW LSRKY +I IK N L D IY G+ L I
Sbjct: 22 AASAQSIKVKKGDTLWDLSRKYDTTISKIKSENHLRSDFIYVGQTLSI 69
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 26/35 (74%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LW +S+KYG++++ +K+ NGL D + G+ L
Sbjct: 94 GDSLWKISKKYGMTVNELKKLNGLKSDLLRVGQVL 128
>gi|403236484|ref|ZP_10915070.1| glycoside hydrolase family protein [Bacillus sp. 10403023]
Length = 1833
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 31/38 (81%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL+ ++++Y VS+D+IK+ NGL+ D ++ G++L +P
Sbjct: 142 GDTLYSIAKRYNVSVDSIKKVNGLTSDMLFVGQQLRLP 179
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 67 STQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEAN 126
+T P P PI T P + +T +V GDTLW ++ + ++ +KEAN
Sbjct: 1649 TTLPNTVPVVSPIYTGP----------VQTYKTYTVVAGDTLWVIANRNDTTVSELKEAN 1698
Query: 127 GLSGDTIYAGKKLIIP 142
G++ D+++ G+ L IP
Sbjct: 1699 GMTTDSLFVGQVLRIP 1714
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P + + GDTL+G++++Y ++ AIK AN L+ D + G+ L IP
Sbjct: 1784 PTNVVIHTVASGDTLYGIAKRYNTTVTAIKTANNLTSDILSIGQTLKIP 1832
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+V GDTL+G+S K+G ++D +K N L+ + G+ L +P
Sbjct: 294 VVAGDTLYGISMKFGTTVDQLKSLNNLTTTVLNVGQVLKVP 334
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+V GDTL+ +S+K+G ++ I+ AN L+ + G+ L IP
Sbjct: 354 VVAGDTLYSISQKFGTTVSVIQAANTLTTTNLSIGQVLTIP 394
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T + GDTL+ ++++Y ++D ++ N L D + G+KL IP
Sbjct: 182 TYTVSSGDTLYSIAKRYNTTVDQLRTTNQLKTDMLSIGQKLRIP 225
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/53 (24%), Positives = 30/53 (56%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
SE S + + +GD+L+ ++++Y ++D++ N ++ D I + L +P
Sbjct: 1272 SEVTTVSMSSYTVAQGDSLYAVAKRYNTTVDSLMSLNNMTSDVIQPNQTLRLP 1324
>gi|294055333|ref|YP_003548991.1| peptidoglycan-binding lysin domain-containing protein
[Coraliomargarita akajimensis DSM 45221]
gi|293614666|gb|ADE54821.1| Peptidoglycan-binding lysin domain protein [Coraliomargarita
akajimensis DSM 45221]
Length = 303
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 90 SEPEPASCRTVEIV-RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ P P S + +V +GDTL ++ +YGVS+ AIK+AN L D + G++L IP
Sbjct: 79 ASPRPTSSNAIHLVQKGDTLGHIALRYGVSVSAIKQANNLRNDVVRVGQRLSIP 132
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
A+ TV IVR G+TL +S +Y V I+AIK+AN L DT+ +KLIIP
Sbjct: 28 ANGSTVHIVRKGETLSHISLRYNVKINAIKQANNLRSDTVRIDQKLIIP 76
>gi|297620367|ref|YP_003708504.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase cwlS
precursor [Waddlia chondrophila WSU 86-1044]
gi|297375668|gb|ADI37498.1| putative D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase
cwlS precursor [Waddlia chondrophila WSU 86-1044]
gi|337292465|emb|CCB90487.1| putative D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase
cwlS [Waddlia chondrophila 2032/99]
Length = 195
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 30/42 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E+V GD+L ++RK+ +I IKE N LSGD IY G+KL +P
Sbjct: 154 EVVSGDSLEKIARKHNTTIQKIKELNKLSGDRIYIGQKLKMP 195
>gi|375111186|ref|ZP_09757397.1| lytic murein transglycosylase [Alishewanella jeotgali KCTC 22429]
gi|374568728|gb|EHR39900.1| lytic murein transglycosylase [Alishewanella jeotgali KCTC 22429]
Length = 528
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
GI+++ L+ LN L N Q I P + + E + PA+
Sbjct: 367 GISVAALQKLNNLTSNNIRIGQNLLI--------PRSDTTAAAQQTQLAEATAQTPATAV 418
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLII 141
+I RGDTLW LSRKY V++ I+E N L +G + G++L I
Sbjct: 419 KHQIQRGDTLWDLSRKYDVTVAQIREWNKLAAGAPLREGQQLTI 462
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 10/120 (8%)
Query: 23 GREAAVAKTAGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTK 82
GR+ +A A +GI+++ L+ALNP T P+ + P++
Sbjct: 284 GRQLDLAVAAEL---AGISVADLQALNP--GYSQWATAPEGPHQLVLPVEKAEHFSAQLA 338
Query: 83 PSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ + + +P ++ GDTL ++++YG+S+ A+++ N L+ + I G+ L+IP
Sbjct: 339 QTPVEKMMQWQPYQVKS-----GDTLGAIAKRYGISVAALQKLNNLTSNNIRIGQNLLIP 393
>gi|366089656|ref|ZP_09456022.1| Surface antigen [Lactobacillus acidipiscis KCTC 13900]
Length = 439
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 8/78 (10%)
Query: 65 AESTQPIQPPPQQPIVTKPSICTEKSEPE-PASCRTVEIVRGDTLWGLSRKYGVSIDAIK 123
AE QP QP + + TK ++P+ A+ T E+ G++L+ L+ YGV++D+++
Sbjct: 168 AEQQQPTQPAKTEAVQTK-------AQPKVSANHVTHEVKSGESLYTLANDYGVTVDSLR 220
Query: 124 EANGLSGDTIYAGKKLII 141
EAN LS + G+ L I
Sbjct: 221 EANALSSSALQVGQSLTI 238
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 2/46 (4%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT--IYAGKKLIIP 142
T ++ DT+WGLS+KYGVSI +I++ N +S ++ IY G+ + IP
Sbjct: 31 THKVANHDTVWGLSQKYGVSIQSIEQLNHISSNSHLIYPGQNVQIP 76
>gi|29378413|gb|AAO83908.1| invasion associated protein p60 [Listeria seeligeri]
Length = 503
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 4 VTAFAAPTIASASTVVVEAGDTLWGIAQDNGTTVDALKKANKLTTDKIVPGQKLQV 59
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 58 TTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYG 116
TTQ P ++ ++ K ++ T+ + P + T V+ GDT+W LS KYG
Sbjct: 145 TTQAAPAQQTKTEVKQATPAATTEKEAVETKTTAPAVDTNATTHTVKSGDTIWALSVKYG 204
Query: 117 VSIDAIKEANGLSGDTIYAGKKLII 141
S+ + N LS +IY G+ + +
Sbjct: 205 ASVQDLMSWNNLSASSIYVGQNIAV 229
>gi|29378403|gb|AAO83903.1| invasion associated protein p60 [Listeria seeligeri]
Length = 516
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 55 RNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSR 113
+ ETTQ P ++ ++ K ++ T+ + P + T V+ GDT+W LS
Sbjct: 154 QQETTQAAPAQQTKTEVKQATPAATTEKDAVETKTTAPAVDTNATTHTVKSGDTIWALSV 213
Query: 114 KYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYG S+ + N LS +IY G+ + +
Sbjct: 214 KYGASVQDLMSWNNLSSSSIYVGQNIAV 241
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQDNGTTVDALKKANKLTTDKIVPGQKLQV 71
>gi|29378559|gb|AAO83981.1| invasion associated protein p60 [Listeria seeligeri]
Length = 516
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 55 RNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSR 113
+ ETTQ P ++ ++ K ++ T+ + P + T V+ GDT+W LS
Sbjct: 154 QQETTQAAPAQQTKTEVKQATPAATTEKDAVETKTTAPAVDTNATTHTVKSGDTIWALSV 213
Query: 114 KYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYG S+ + N LS +IY G+ + +
Sbjct: 214 KYGASVQDLMSWNNLSSSSIYVGQNIAV 241
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQDNGTTVDALKKANKLTTDKIVPGQKLQV 71
>gi|29378411|gb|AAO83907.1| invasion associated protein p60 [Listeria seeligeri]
Length = 501
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 2 VTAFAAPTIASASTVVVEAGDTLWGIAQDNGTTVDALKKANKLTTDKIVPGQKLQV 57
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 58 TTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYG 116
TTQ P ++ ++ K ++ T+ + P + T V+ GDT+W LS KYG
Sbjct: 143 TTQAAPAQQTKTEVKQATPAATTEKEAVETKTTAPAVDTNATTHTVKSGDTIWALSVKYG 202
Query: 117 VSIDAIKEANGLSGDTIYAGKKLII 141
S+ + N LS +IY G+ + +
Sbjct: 203 ASVQDLMSWNNLSASSIYVGQNIAV 227
>gi|29378407|gb|AAO83905.1| invasion associated protein p60 [Listeria seeligeri]
Length = 524
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 16 VTAFAXPTIASASTVVVEAGDTLWGIAQDNGTTVDALKKANKLTTDKIVPGQKLQV 71
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 58 TTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYG 116
TTQ P ++ ++ K ++ T+ + P + T V+ GDT+W LS KYG
Sbjct: 157 TTQAAPAQQTKTEVKQATPAATTEKEAVETKTTAPAVDTNATTHTVKSGDTIWALSVKYG 216
Query: 117 VSIDAIKEANGLSGDTIYAGKKLII 141
S+ + N LS +IY G+ + +
Sbjct: 217 ASVQDLMSWNNLSASSIYVGQNIAV 241
>gi|398307622|ref|ZP_10511208.1| endopeptidase LytF [Bacillus vallismortis DV1-F-3]
Length = 411
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
PA +T+++ GD+LW LSR+Y +I A+K N L IYAG+ L I
Sbjct: 23 PAEAKTIKVKNGDSLWKLSRQYDTTISALKSENKLKSTVIYAGQSLKI 70
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T ++ GD+LW ++ + GV++ +I++ N LS D + G+ L I
Sbjct: 226 TYKVKAGDSLWKIANQLGVTVQSIRDKNKLSSDVLQIGQVLTIS 269
>gi|374711213|ref|ZP_09715647.1| autolysin [Sporolactobacillus inulinus CASD]
Length = 369
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 47/101 (46%), Gaps = 6/101 (5%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G+ ++ LK+LN L + Q ++ STQ V E P S
Sbjct: 201 GMTVAKLKSLNHLKSDLIYPGQALKLSGSTQTEAASQNSGAVQ------ETEAPAKTSAA 254
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T + GD+LW ++ G+S+ A+K NGL+ D IY G+ L
Sbjct: 255 TYTVKSGDSLWKIATGNGISVSALKSINGLNSDVIYPGQTL 295
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 9/104 (8%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
GI++S LK++N LN + Q ++ S + ++T+ T +S
Sbjct: 272 GISVSALKSINGLNSDVIYPGQTLKLSGS-----ASSSKTVITQ----TAAKSTSSSSKS 322
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T ++ GD+LW ++ +G+S++ + AN LS IY G+ L+IP
Sbjct: 323 TYKVKSGDSLWEIATLHGISVNQLMRANNLSATLIYPGQHLLIP 366
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 82 KPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+P+ T ++ S TV+ GD+LW ++ +G+++ +K N L D IY G+ L
Sbjct: 169 QPAQSTAPAQTSATSSYTVK--SGDSLWKIASHHGMTVAKLKSLNHLKSDLIYPGQAL 224
>gi|315283968|ref|ZP_07871972.1| autolysin, partial [Listeria marthii FSL S4-120]
gi|313612384|gb|EFR86522.1| autolysin [Listeria marthii FSL S4-120]
Length = 68
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 82 KPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KPS T P ++ +T + +GD+LW +SR+Y ++D IK N L + I+ G+KL I
Sbjct: 12 KPSTNT----PSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLPSNMIHVGQKLTI 67
>gi|261823154|ref|YP_003261260.1| cell wall hydrolase/autolysin [Pectobacterium wasabiae WPP163]
gi|261607167|gb|ACX89653.1| cell wall hydrolase/autolysin [Pectobacterium wasabiae WPP163]
Length = 542
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 68 TQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANG 127
T P+Q P+Q ++P S R + RG+TL ++R+YGVS+ A+++ N
Sbjct: 406 THPMQSLPKQE--SRPRQSAASDTATSGSTRHT-VARGETLSSIARRYGVSLAAMRDVNK 462
Query: 128 LSGDTIYAGKKLIIP 142
L+ D ++ G++L +P
Sbjct: 463 LNKDIVWVGQRLNVP 477
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 40/64 (62%), Gaps = 4/64 (6%)
Query: 83 PSICTEKSEPEPASCRTV----EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKK 138
P+ T+++ PA +T ++V+GD+L ++ +YGVS+ I++AN L ++ G+
Sbjct: 477 PATGTKQTASTPAPKKTAPVKHKVVKGDSLSAIAARYGVSMKEIQQANNLRSGSVQLGQT 536
Query: 139 LIIP 142
LIIP
Sbjct: 537 LIIP 540
>gi|66968494|gb|AAY59626.1| invasion associated protein p60 [Listeria seeligeri]
gi|66968496|gb|AAY59627.1| invasion associated protein p60 [Listeria seeligeri]
gi|66968498|gb|AAY59628.1| invasion associated protein p60 [Listeria seeligeri]
Length = 525
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQDNGTTVDALKKANKLTTDKIVPGQKLQV 71
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 58 TTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYG 116
TTQ P ++ ++ K ++ T+ + P + T V+ GDT+W LS KYG
Sbjct: 157 TTQAAPAQQTKTEVKQATPAATTEKEAVETKTTAPAVDTNATTHTVKSGDTIWALSVKYG 216
Query: 117 VSIDAIKEANGLSGDTIYAGKKLII 141
S+ + N LS +IY G+ + +
Sbjct: 217 ASVQDLMSWNNLSASSIYVGQNIAV 241
>gi|383791049|ref|YP_005475623.1| metalloendopeptidase-like membrane protein [Spirochaeta africana
DSM 8902]
gi|383107583|gb|AFG37916.1| metalloendopeptidase-like membrane protein [Spirochaeta africana
DSM 8902]
Length = 285
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT-IYAGKKLIIP 142
E+ RGDTL+ +SR+Y V++DA++E NGL + I+AG++L +P
Sbjct: 32 EVRRGDTLYSISRRYDVTVDALRELNGLDEEARIFAGQQLKLP 74
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLS-GDTIYAGKKLIIP 142
P+ +T + RGDTL+GL+R++ ++ I++ N L D + G+KL +P
Sbjct: 74 PSDYQTYTVERGDTLFGLARRHNTTVATIRQLNQLDESDVLRIGQKLRLP 123
>gi|451940516|ref|YP_007461154.1| putative virulence determinant [Bartonella australis Aust/NH1]
gi|451899903|gb|AGF74366.1| putative virulence determinant [Bartonella australis Aust/NH1]
Length = 387
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 30/38 (78%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL ++++ GVSI+A+K ANG+ D +Y G+KLIIP
Sbjct: 133 GDTLLSIAQQVGVSINALKLANGMRNDAVYIGQKLIIP 170
>gi|66968490|gb|AAY59624.1| invasion associated protein p60 [Listeria seeligeri]
gi|66968492|gb|AAY59625.1| invasion associated protein p60 [Listeria seeligeri]
Length = 525
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQDNGTTVDALKKANKLTTDKIVPGQKLQV 71
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 58 TTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYG 116
TTQ P ++ ++ K ++ T+ + P + T V+ GDT+W LS KYG
Sbjct: 157 TTQAAPAQQTKTEVKQATPAATTEKEAVETKSTAPAVDTNATTHTVKSGDTIWALSVKYG 216
Query: 117 VSIDAIKEANGLSGDTIYAGKKLII 141
S+ + N LS +IY G+ + +
Sbjct: 217 ASVQDLMSWNNLSASSIYVGQNIAV 241
>gi|422421181|ref|ZP_16498134.1| protein p60 [Listeria seeligeri FSL S4-171]
gi|313639231|gb|EFS04163.1| protein p60 [Listeria seeligeri FSL S4-171]
Length = 523
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 14 VTAFAAPTIASASTVVVEAGDTLWGIAQDNGTTVDALKKANKLTTDKIVPGQKLQV 69
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 58 TTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYG 116
TTQ P ++ ++ K ++ T+ + P + T V+ GDT+W LS KYG
Sbjct: 155 TTQAAPAQQTKTEVKQATPAATTEKEAVETKTTAPAVDTNATTHTVKSGDTIWALSVKYG 214
Query: 117 VSIDAIKEANGLSGDTIYAGKKLII 141
S+ + N LS +IY G+ + +
Sbjct: 215 ASVQDLMSWNNLSASSIYVGQNIAV 239
>gi|289433859|ref|YP_003463731.1| protein p60 precursor (invasion-associated protein) [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|266726|sp|Q01838.1|P60_LISSE RecName: Full=Probable endopeptidase p60; AltName:
Full=Invasion-associated protein p60; Flags: Precursor
gi|149669|gb|AAA25286.1| extracellular protein [Listeria seeligeri]
gi|289170103|emb|CBH26643.1| protein p60 precursor (invasion-associated protein) [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 523
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQDNGTTVDALKKANKLTTDKIVPGQKLQV 71
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 55 RNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSR 113
+ ETTQ P ++ ++ K ++ T+ + P + T V+ GDT+W LS
Sbjct: 154 QEETTQAAPAQQTKTEVKQATPAATTEKDAVETKTTAPAVDTNATTHTVKSGDTIWALSV 213
Query: 114 KYGVSIDAIKEANGLSGDTIYAGKKLII 141
KYG S+ + N LS +IY G+ + +
Sbjct: 214 KYGASVQDLMSWNNLSSSSIYVGQNIAV 241
>gi|347014923|gb|AEO72015.1| invasion associated protein p60 [Listeria seeligeri]
Length = 524
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQDNGTTVDALKKANKLTTDKIVPGQKLQV 71
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 58 TTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYG 116
TTQ P ++ ++ K ++ T+ + P + T V+ GDT+W LS KYG
Sbjct: 157 TTQAAPAQQTKTEVKQATPAATTEKEAVETKTTAPAVDTNATTHTVKSGDTIWALSVKYG 216
Query: 117 VSIDAIKEANGLSGDTIYAGKKLII 141
S+ + N LS +IY G+ + +
Sbjct: 217 ASVQDLMSWNNLSASSIYVGQNIAV 241
>gi|266723|sp|Q01835.1|P60_LISGR RecName: Full=Probable endopeptidase p60; AltName:
Full=Invasion-associated protein p60; Flags: Precursor
gi|149667|gb|AAA25285.1| extracellular protein [Listeria grayi]
Length = 511
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 79 IVTKPSIC-TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGK 137
IV+ I T + P S TV + GDTLWG++ K G ++D +K+ N L D I G+
Sbjct: 8 IVSAAGIAVTAFAAPSVVSANTVVVASGDTLWGIASKTGTTVDQLKQLNKLDSDRIVPGQ 67
Query: 138 KLII 141
KL I
Sbjct: 68 KLTI 71
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 13/73 (17%)
Query: 78 PIVTKPSICTEKSEPEPAS-----------CRTVEIVRGDTLWGLSRKYGVSIDAIKEAN 126
P+VTK T K+E + A+ T ++ GDT+W LS KYGV + + E N
Sbjct: 146 PVVTKA--VTHKAEAKVAATSTHAVKVDTNASTYKVKSGDTIWALSVKYGVPVQKLIEWN 203
Query: 127 GLSGDTIYAGKKL 139
LS +IY G+ +
Sbjct: 204 NLSSSSIYVGQTI 216
>gi|347014933|gb|AEO72020.1| invasion associated protein p60 [Listeria grayi]
Length = 512
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P S TV + GDTLWG++ K G ++D +K+ N L D I G+KL I
Sbjct: 17 VTAFAAPSVVSANTVVVASGDTLWGIASKTGTTVDQLKQLNKLDSDRIVPGQKLTI 72
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 13/73 (17%)
Query: 78 PIVTKPSICTEKSEPEPAS-----------CRTVEIVRGDTLWGLSRKYGVSIDAIKEAN 126
P+VTK T K+E + A+ T ++ GDT+W LS KYGV + + E N
Sbjct: 147 PVVTKA--VTHKAEAKVAATSTHAVKVDTNASTYKVKSGDTIWALSVKYGVPVQKLIEWN 204
Query: 127 GLSGDTIYAGKKL 139
LS +IY G+ +
Sbjct: 205 NLSSSSIYVGQTI 217
>gi|384265670|ref|YP_005421377.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase (major
autolysin) [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|387898666|ref|YP_006328962.1| hypothetical protein MUS_2291 [Bacillus amyloliquefaciens Y2]
gi|380499023|emb|CCG50061.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase (major
autolysin) [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|387172776|gb|AFJ62237.1| conserved hypothetical protein YojL [Bacillus amyloliquefaciens Y2]
Length = 413
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ T PA +T+++ GD+LW LSR+Y SI A++ N L ++ G++L IP
Sbjct: 13 AVMTSTFAVHPAEAKTIQVKSGDSLWKLSRQYHTSISALQAENKLKSTILHPGQRLHIP 71
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S + GD+LW +++KY +S+ ++ N L+ D IY G+KL I
Sbjct: 86 STGAYTVTYGDSLWVIAKKYKMSVSELRSLNRLNSDVIYPGQKLKI 131
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 18/108 (16%)
Query: 38 SGIAISILKALNPLNKNRNETTQPQPIAESTQP----IQPPPQQPIVTKPSICTEKSEPE 93
+G+ I+ LK LN L + Q I S+ PP KPS
Sbjct: 170 TGVTIAELKKLNQLTSDMLYPNQVLKIKGSSHNGNSGTTPPSHSNPSEKPS--------- 220
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GD+LW ++ ++G++ I+E N L+ D + G+ L+I
Sbjct: 221 -----TYKVKAGDSLWKIANRFGITAQLIREKNKLTTDVLQIGQVLVI 263
>gi|339627921|ref|YP_004719564.1| cell wall hydrolase SleB [Sulfobacillus acidophilus TPY]
gi|339285710|gb|AEJ39821.1| cell wall hydrolase SleB [Sulfobacillus acidophilus TPY]
Length = 313
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 88 EKSEPEPA--SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
K P PA + + I GDTLW L+ ++ V+++ ++EAN L+ IYAG+ LIIP
Sbjct: 60 RKVVPRPAAPTGQVYRIQWGDTLWTLAERFHVTVNDLEEANHLTSPEIYAGQSLIIP 116
>gi|29378405|gb|AAO83904.1| invasion associated protein p60 [Listeria seeligeri]
Length = 525
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS TV + GDTLWG+++ G ++DA+K+AN L+ D I G+KL +
Sbjct: 16 VTAFAAPTIASASTVVVEAGDTLWGIAQDNGTTVDALKKANKLTTDKIVPGQKLQV 71
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 58 TTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYG 116
TTQ P ++ ++ K ++ T+ + P + T V GDT+W LS KYG
Sbjct: 157 TTQAAPAQQTKTEVKQATPAATTEKEAVETKTTAPAVDTNATTHTVNSGDTIWALSVKYG 216
Query: 117 VSIDAIKEANGLSGDTIYAGKKLII 141
S+ + N LS +IY G+ + +
Sbjct: 217 ASVQDLMSWNNLSSSSIYVGQNIAV 241
>gi|451346701|ref|YP_007445332.1| protein YojL [Bacillus amyloliquefaciens IT-45]
gi|449850459|gb|AGF27451.1| protein YojL [Bacillus amyloliquefaciens IT-45]
Length = 413
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ T PA +T+++ GD+LW LSR+Y SI A++ N L ++ G++L IP
Sbjct: 13 AVMTSTFAVHPAEAKTIQVKSGDSLWKLSRQYHTSISALQAENKLKSTILHPGQRLHIP 71
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GD+LW +++KY +S+ ++ N LS D IY G+KL I
Sbjct: 92 VTYGDSLWVIAKKYRMSVSELRSLNRLSSDVIYPGQKLKI 131
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 18/108 (16%)
Query: 38 SGIAISILKALNPLNKNRNETTQPQPIAESTQP----IQPPPQQPIVTKPSICTEKSEPE 93
+GI I+ LK LN L + Q I S+ PP KPS
Sbjct: 170 TGITIAELKKLNQLTSDMLYPNQVLKIKGSSHNGNSGTTPPSHSNPSEKPS--------- 220
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GD+LW ++ ++G++ I+E N L+ D + G+ L+I
Sbjct: 221 -----TYKVKAGDSLWKIANRFGITAQLIREKNKLTTDVLQIGQVLLI 263
>gi|255024853|ref|ZP_05296839.1| autolysin [Listeria monocytogenes FSL J1-208]
Length = 150
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 82 KPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KPS T ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 94 KPSTNT----TNNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 149
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 82 KPSICTEKSEPEPAS-------CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
KPS T S+P + + + +GD+LW ++ V+I +K N L D IY
Sbjct: 16 KPSTNTNTSKPNTNNSTSTSTNAKVYTVAKGDSLWRIANNNKVTIANLKAWNNLKSDFIY 75
Query: 135 AGKKLII 141
G+KL +
Sbjct: 76 PGQKLKV 82
>gi|422810727|ref|ZP_16859138.1| N-acetylmuramoyl-L-alanine amidase family 4 [Listeria monocytogenes
FSL J1-208]
gi|378750932|gb|EHY61523.1| N-acetylmuramoyl-L-alanine amidase family 4 [Listeria monocytogenes
FSL J1-208]
Length = 595
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 82 KPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
KPS T + ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+KL I
Sbjct: 539 KPSTNTTNN----STVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQKLTI 594
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPASCRTVEI---VRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S P + +I V+GD+LW ++ V+I +K N L D IY G
Sbjct: 384 TSKPSTGTSTSNPSTGTSTNAKIYTVVKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 443
Query: 137 KKLII 141
+KL +
Sbjct: 444 QKLKV 448
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V+I +K N L D IY G+KL +
Sbjct: 327 SNAKIYTVVKGDSLWRIANNHKVTIANLKAWNNLKSDFIYPGQKLKV 373
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Query: 82 KPSICTEKSEPEPAS-------CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
KPS T S+P + + + +GD+LW ++ V+I +K N L D IY
Sbjct: 461 KPSTNTNTSKPNTNNSTSTSTNAKVYTVAKGDSLWRIANNNKVTIANLKAWNNLKSDFIY 520
Query: 135 AGKKLII 141
G+KL +
Sbjct: 521 PGQKLKV 527
>gi|384047131|ref|YP_005495148.1| hypothetical protein BMWSH_2957 [Bacillus megaterium WSH-002]
gi|345444822|gb|AEN89839.1| 3D domain protein [Bacillus megaterium WSH-002]
Length = 345
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 38 SGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASC 97
+G ++ LK N L+ + Q I T + P P+ K + ++ P P++
Sbjct: 107 NGTSVQQLKEWNNLSSHLIYVNQVLKI-NGTGTVSSSPSAPVQEKTN--GTQASPAPSNS 163
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
++ ++ GDT+W +++++G+SI +K+ N LS +TIY + L
Sbjct: 164 KSYKVQPGDTMWSVAQRHGISISQLKQWNNLSSNTIYINQVL 205
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ A T ++ G+TL+ +S+++ V+++ +K+ NGLS IYA + L I
Sbjct: 19 ADAASADTDTHKVKAGETLFSISQQHNVTVEDLKKWNGLSSTLIYANQTLQI 70
>gi|345017470|ref|YP_004819823.1| cell wall hydrolase SleB [Thermoanaerobacter wiegelii Rt8.B1]
gi|344032813|gb|AEM78539.1| cell wall hydrolase SleB [Thermoanaerobacter wiegelii Rt8.B1]
Length = 266
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P S T + +GD+L+ ++ KYG+++D +K ANG D IY G+ IIP
Sbjct: 72 PGSDNTYVVQKGDSLYLIALKYGITVDMLKSANGYKSDIIYPGQVFIIP 120
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTLWG+S+KYG + + NGL IY G+ L +P
Sbjct: 35 GDTLWGISQKYGTTYTKLMSLNGLQSTIIYPGQVLQVP 72
>gi|299821427|ref|ZP_07053315.1| invasion associated protein p60 [Listeria grayi DSM 20601]
gi|299817092|gb|EFI84328.1| invasion associated protein p60 [Listeria grayi DSM 20601]
Length = 513
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P S TV + GDTLWG++ K G ++D +K+ N L D I G+KL I
Sbjct: 15 VTAFAAPSVVSANTVVVASGDTLWGIASKTGTTVDQLKQLNKLDSDRIVPGQKLTI 70
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 13/73 (17%)
Query: 78 PIVTKPSICTEKSEPEPAS-----------CRTVEIVRGDTLWGLSRKYGVSIDAIKEAN 126
P+VTK T K+E + A+ T ++ GDT+W LS KYGV + + E N
Sbjct: 145 PVVTKA--VTHKAEAKVAATSTHAVKVDTNASTYKVKSGDTIWALSVKYGVPVQKLIEWN 202
Query: 127 GLSGDTIYAGKKL 139
LS +IY G+ +
Sbjct: 203 NLSSSSIYVGQTI 215
>gi|421731404|ref|ZP_16170530.1| YojL [Bacillus amyloliquefaciens subsp. plantarum M27]
gi|407075558|gb|EKE48545.1| YojL [Bacillus amyloliquefaciens subsp. plantarum M27]
Length = 413
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ T PA +T+++ GD+LW LSR+Y SI A++ N L ++ G++L IP
Sbjct: 13 AVMTSTFAVHPAEAKTIQVKSGDSLWKLSRQYHTSISALQAENKLKSTILHPGQRLHIP 71
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 18/108 (16%)
Query: 38 SGIAISILKALNPLNKNRNETTQPQPIAESTQP----IQPPPQQPIVTKPSICTEKSEPE 93
+GI I+ LK LN L + Q I S+ PP KPS
Sbjct: 170 TGITIAELKKLNQLTSDMLYPNQVLKIKGSSHNGNSGTTPPSHSNPSEKPS--------- 220
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GD+LW ++ ++G++ I+E N L+ D + G+ L+I
Sbjct: 221 -----TYKVKAGDSLWKIANRFGITAQLIREKNKLTTDVLQIGQVLLI 263
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GD+LW +++K+ +S+ ++ N LS D IY G+KL I
Sbjct: 92 VTYGDSLWVIAKKFRMSVSELRSLNRLSSDVIYPGQKLKI 131
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 32/54 (59%)
Query: 88 EKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+++P+ + T + GD+LW ++ + G++I +K+ N L+ D +Y + L I
Sbjct: 143 RQTKPDKGASGTYTVKPGDSLWKIANRTGITIAELKKLNQLTSDMLYPNQVLKI 196
>gi|384048938|ref|YP_005496955.1| lytic transglycosylase [Bacillus megaterium WSH-002]
gi|345446629|gb|AEN91646.1| Lytic transglycosylase catalytic [Bacillus megaterium WSH-002]
Length = 240
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RGDTLW + + YGV+++ IKE NGL+ D ++ G++ I
Sbjct: 81 VKRGDTLWSIGQHYGVTVEEIKEWNGLTSDLVFPGEQFKIK 121
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
T E+ +GDTLW +++ + VS+D +K+AN L+ IY
Sbjct: 29 TYEVQKGDTLWKIAQNHNVSVDELKDANNLTSTLIY 64
>gi|154686349|ref|YP_001421510.1| hypothetical protein RBAM_019170 [Bacillus amyloliquefaciens FZB42]
gi|154352200|gb|ABS74279.1| YojL [Bacillus amyloliquefaciens FZB42]
Length = 413
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ T PA +T+++ GD+LW LSR+Y SI A++ N L ++ G++L IP
Sbjct: 13 AVMTSTFAVHPAEAKTIQVKSGDSLWKLSRQYHTSISALQAENKLKSTILHPGQRLHIP 71
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S + GD+LW +++KY +S+ ++ N LS D IY G+KL I
Sbjct: 86 STGAYTVTYGDSLWVIAKKYKMSVSELRSLNRLSSDVIYPGQKLKI 131
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 18/108 (16%)
Query: 38 SGIAISILKALNPLNKNRNETTQPQPIAESTQP----IQPPPQQPIVTKPSICTEKSEPE 93
+GI I+ LK LN L + Q I S+ PP KPS
Sbjct: 170 TGITIAELKKLNQLTSDMLYPNQVLKIKGSSHSGNSGTTPPSHSNPSEKPS--------- 220
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GD+LW ++ ++G++ I+E N L+ D + G+ L+I
Sbjct: 221 -----TYKVKAGDSLWKIANRFGITAQLIREKNKLTTDVLQIGQVLVI 263
>gi|149655|gb|AAA25279.1| p60-related protein [Listeria grayi]
Length = 512
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P S TV + GDTLWG++ K G ++D +K+ N L D I G+KL I
Sbjct: 17 VTAFAAPSVVSANTVVVASGDTLWGIASKTGTTVDQLKQLNKLDSDRIVPGQKLTI 72
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 38/73 (52%), Gaps = 13/73 (17%)
Query: 78 PIVTKPSICTEKSEPEPAS-----------CRTVEIVRGDTLWGLSRKYGVSIDAIKEAN 126
P+VTK T K+E + A+ T ++ GDT+W LS KYGV + + E N
Sbjct: 147 PVVTKA--VTHKAEAKVAATSTHAVKVDTNASTYKVKSGDTIWALSVKYGVPVQKLIEWN 204
Query: 127 GLSGDTIYAGKKL 139
LS +IY G+ +
Sbjct: 205 NLSSSSIYVGQTI 217
>gi|394991670|ref|ZP_10384470.1| YojL [Bacillus sp. 916]
gi|393807499|gb|EJD68818.1| YojL [Bacillus sp. 916]
Length = 413
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ T PA +T+++ GD+LW LSR+Y SI A++ N L ++ G++L IP
Sbjct: 13 AVMTSTFAVHPAEAKTIQVKSGDSLWKLSRQYHTSISALQAENKLKSTILHPGQRLHIP 71
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S + GD+LW +++KY +S+ ++ N LS D IY G+KL I
Sbjct: 86 STGAYTVTYGDSLWVIAKKYKMSVSELRSLNRLSSDVIYPGQKLKI 131
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 18/108 (16%)
Query: 38 SGIAISILKALNPLNKNRNETTQPQPIAESTQP----IQPPPQQPIVTKPSICTEKSEPE 93
+GI I+ LK LN L + Q I S+ PP KPS
Sbjct: 170 TGITIAELKKLNQLTSDMLYPNQVLKIKGSSHNGNSGTTPPSHSNPSEKPS--------- 220
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GD+LW ++ ++G++ I+E N L+ D + G+ L+I
Sbjct: 221 -----TYKVKAGDSLWKIANRFGITAQLIREKNKLTTDVLQIGQVLVI 263
>gi|379007554|ref|YP_005257005.1| cell wall hydrolase SleB [Sulfobacillus acidophilus DSM 10332]
gi|361053816|gb|AEW05333.1| cell wall hydrolase SleB [Sulfobacillus acidophilus DSM 10332]
Length = 325
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 88 EKSEPEPA--SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
K P PA + + I GDTLW L+ ++ V+++ ++EAN L+ IYAG+ LIIP
Sbjct: 72 RKVVPRPAAPTGQVYRIQWGDTLWTLAERFHVTVNDLEEANHLTSPEIYAGQSLIIP 128
>gi|418032874|ref|ZP_12671356.1| hypothetical protein BSSC8_23000 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|351470581|gb|EHA30715.1| hypothetical protein BSSC8_23000 [Bacillus subtilis subsp. subtilis
str. SC-8]
Length = 414
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA +T+++ GD+LW LSR+Y +I A+K N L +Y G+ L +P
Sbjct: 23 PAEAKTIKVKSGDSLWKLSRQYDTTISALKSENKLKSTVLYVGQSLKVP 71
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+ ++ LK LN L ++T P+ + + P KPS P+ T
Sbjct: 176 MTVAELKTLNGLT---SDTLYPKQMLKIKGSSSPKNGNSGSKKPS------NSNPSKTTT 226
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ GD+LW ++ + GV++ +I++ N LS D + G+ L I
Sbjct: 227 YKVKAGDSLWKIANRLGVTVQSIRDKNNLSSDVLQIGQVLTI 268
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW +++ + +S+ +K N LS D I G+KL I
Sbjct: 89 TYTVAYGDSLWMIAKNHKMSVSELKSLNSLSSDLIRPGQKLKI 131
>gi|167040069|ref|YP_001663054.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X514]
gi|256752689|ref|ZP_05493539.1| cell wall hydrolase SleB [Thermoanaerobacter ethanolicus CCSD1]
gi|300914153|ref|ZP_07131469.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X561]
gi|307724611|ref|YP_003904362.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X513]
gi|166854309|gb|ABY92718.1| cell wall hydrolase, SleB [Thermoanaerobacter sp. X514]
gi|256748408|gb|EEU61462.1| cell wall hydrolase SleB [Thermoanaerobacter ethanolicus CCSD1]
gi|300889088|gb|EFK84234.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X561]
gi|307581672|gb|ADN55071.1| cell wall hydrolase SleB [Thermoanaerobacter sp. X513]
Length = 267
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P S T + +GD+L+ ++ KYG+++D +K ANG D IY G+ IIP
Sbjct: 72 PGSDNTYVVQKGDSLYLIALKYGITVDMLKSANGYKSDIIYPGQVFIIP 120
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTLWG+S+KYG + + NGL IY G+ L +P
Sbjct: 35 GDTLWGISQKYGTTYTKLMSLNGLQSTVIYPGQVLQVP 72
>gi|429505486|ref|YP_007186670.1| hypothetical protein B938_09920 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429487076|gb|AFZ91000.1| hypothetical protein B938_09920 [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 432
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ T PA +T+++ GD+LW LSR+Y SI A++ N L ++ G++L IP
Sbjct: 13 AVMTSTFAVHPAEAKTIQVKSGDSLWKLSRQYHTSISALQAENKLKSTILHPGQRLHIP 71
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GD+LW +++KY +S+ ++ N LS D IY G+KL I
Sbjct: 92 VTYGDSLWVIAKKYKMSVSELRSLNRLSSDVIYPGQKLKI 131
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 18/108 (16%)
Query: 38 SGIAISILKALNPLNKNRNETTQPQPIAESTQP----IQPPPQQPIVTKPSICTEKSEPE 93
+GI I+ LK LN L + Q I S+ PP KPS
Sbjct: 170 TGITIAELKKLNQLTSDMLYPNQVLKIKGSSHNGNSGTTPPSHSNPSEKPS--------- 220
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GD+LW ++ ++G++ I+E N L+ D + G+ L+I
Sbjct: 221 -----TYKVKAGDSLWKIANRFGITAQLIREKNKLTTDVLQIGQVLVI 263
>gi|375362607|ref|YP_005130646.1| protein YojL [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|371568601|emb|CCF05451.1| YojL [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
Length = 413
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ T PA +T+++ GD+LW LSR+Y SI A++ N L ++ G++L IP
Sbjct: 13 AVMTSTFAVHPAEAKTIQVKSGDSLWKLSRQYHTSISALQAENKLKSTILHPGQRLHIP 71
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GD+LW +++KY +S+ ++ N LS D IY G+KL I
Sbjct: 92 VTYGDSLWVIAKKYRMSVSELRSLNRLSSDVIYPGQKLKI 131
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 18/108 (16%)
Query: 38 SGIAISILKALNPLNKNRNETTQPQPIAESTQP----IQPPPQQPIVTKPSICTEKSEPE 93
+GI I+ LK LN L + Q I S+ PP KPS
Sbjct: 170 TGITIAELKKLNQLTSDMLYPNQVLKIKGSSHNGNSGTTPPSHSNPSEKPS--------- 220
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GD+LW ++ ++G++ I+E N L+ D + G+ L+I
Sbjct: 221 -----TYKVKAGDSLWKIANRFGITAQLIREKNKLTTDVLQIGQVLLI 263
>gi|430758304|ref|YP_007209342.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS
[Bacillus subtilis subsp. subtilis str. BSP1]
gi|430022824|gb|AGA23430.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS
[Bacillus subtilis subsp. subtilis str. BSP1]
Length = 414
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA +T+++ GD+LW LSR+Y +I A+K N L +Y G+ L +P
Sbjct: 23 PAEAKTIKVKSGDSLWKLSRQYDTTISALKSENKLKSTVLYVGQSLKVP 71
Score = 42.4 bits (98), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+ ++ LK LN L ++T P+ + + P KPS P+ T
Sbjct: 176 MTVAELKTLNGLT---SDTLYPKQVLKIKGSSSPKSGNSGSKKPS------NSNPSKTTT 226
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ GD+LW ++ + GV++ +I++ N LS D + G+ L I
Sbjct: 227 YKVKAGDSLWKIANRLGVTVQSIRDKNNLSSDVLQIGQVLTI 268
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW +++ + +S+ +K N LS D I G+KL I
Sbjct: 89 TYTVAYGDSLWMIAKNHKMSVSELKSLNSLSSDLIRPGQKLKI 131
>gi|392941185|ref|ZP_10306829.1| putative cell wall hydrolase [Thermoanaerobacter siderophilus SR4]
gi|392292935|gb|EIW01379.1| putative cell wall hydrolase [Thermoanaerobacter siderophilus SR4]
Length = 267
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P S T + +GD+L+ ++ KYG+++D +K ANG D IY G+ IIP
Sbjct: 72 PGSDNTYVVQKGDSLYLIALKYGITVDMLKSANGYKSDIIYPGQVFIIP 120
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTLWG+S+KYG + + NGL IY G+ L +P
Sbjct: 35 GDTLWGISQKYGTTYTKLMSLNGLQNTIIYPGQVLQVP 72
>gi|313885273|ref|ZP_07819025.1| LysM domain protein [Eremococcus coleocola ACS-139-V-Col8]
gi|312619964|gb|EFR31401.1| LysM domain protein [Eremococcus coleocola ACS-139-V-Col8]
Length = 295
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 31/38 (81%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD L+ ++RK+G+S+DA+K+AN L+ + I+ G+ LIIP
Sbjct: 258 GDNLYNIARKFGISLDALKQANNLTSNLIFPGQILIIP 295
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD L+ ++R +GVS+DA+K+ NGL+ + I G LIIP
Sbjct: 193 GDNLYNIARSFGVSLDALKKINGLTSNFIQIGDVLIIP 230
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 85 ICTEKSEPEPASCR----TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLI 140
+ +S+ E + R T E+ GD L+ ++ ++G+S+ +KE NGL D I G LI
Sbjct: 29 VYANQSQDEVTTSRSSQTTYEVQAGDNLYQIALRFGISLQDLKEINGLDSDFIQIGDILI 88
Query: 141 IP 142
IP
Sbjct: 89 IP 90
>gi|296330463|ref|ZP_06872942.1| peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase)
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305674751|ref|YP_003866423.1| peptidoglycan hydrolase (cell wall-binding D,L-endopeptidase)
[Bacillus subtilis subsp. spizizenii str. W23]
gi|296152360|gb|EFG93230.1| peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase)
[Bacillus subtilis subsp. spizizenii ATCC 6633]
gi|305412995|gb|ADM38114.1| peptidoglycan hydrolase (cell wall-binding D,L-endopeptidase)
[Bacillus subtilis subsp. spizizenii str. W23]
Length = 411
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA +T+++ GD+LW LSR+Y +I A+K N L +Y G+ L IP
Sbjct: 23 PAEAKTIKVRSGDSLWKLSRQYDTTISALKSENKLKSTVLYVGQSLKIP 71
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GD+LW ++ + GV++ +I++ N LS D + G+ L I
Sbjct: 226 TYKVKAGDSLWKIANQLGVTVQSIRDKNNLSSDVLQIGQVLTI 268
>gi|428279577|ref|YP_005561312.1| hypothetical protein BSNT_03159 [Bacillus subtilis subsp. natto
BEST195]
gi|291484534|dbj|BAI85609.1| hypothetical protein BSNT_03159 [Bacillus subtilis subsp. natto
BEST195]
Length = 414
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA +T+++ GD+LW LSR+Y +I A+K N L +Y G+ L +P
Sbjct: 23 PAEAKTIKVKSGDSLWKLSRQYDTTISALKSENKLKSTVLYVGQSLKVP 71
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+ ++ LK LN L ++T P+ + + P KPS P+ T
Sbjct: 176 MTVAELKTLNGLT---SDTLYPKQVLKIKGSSSPKNGNSGSKKPS------NSNPSKRTT 226
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ GD+LW ++ + GV++ +I++ N LS D + G+ L I
Sbjct: 227 YKVKAGDSLWKIANRLGVTVQSIRDKNNLSSDVLQIGQVLTI 268
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW +++ + +S+ +K N LS D I G+KL I
Sbjct: 89 TYTVAYGDSLWMIAKNHKMSVSELKSLNSLSSDLIRPGQKLKI 131
>gi|452855866|ref|YP_007497549.1| peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase)
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
gi|452080126|emb|CCP21887.1| peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase)
[Bacillus amyloliquefaciens subsp. plantarum UCMB5036]
Length = 413
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ T PA +T+++ GD+LW LSR+Y SI A++ N L ++ G++L IP
Sbjct: 13 AVMTSTFAVHPAEAKTIQVKSGDSLWKLSRQYHTSISALQAENKLKSTILHPGQRLHIP 71
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S + GD+LW +++KY +S+ ++ N LS D IY G+KL I
Sbjct: 86 STGAYTVTYGDSLWVIAKKYKMSVSELRSLNRLSSDVIYPGQKLKI 131
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 18/108 (16%)
Query: 38 SGIAISILKALNPLNKNRNETTQPQPIAESTQP----IQPPPQQPIVTKPSICTEKSEPE 93
+GI I+ LK LN L + Q I S+ PP KPS
Sbjct: 170 TGITIADLKKLNQLTSDMLYPNQVLKIKGSSHNGNSGTTPPSHSNPSEKPS--------- 220
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GD+LW ++ ++G++ I+E N L+ D + G+ L+I
Sbjct: 221 -----TYKVKAGDSLWKIANRFGITAQLIREKNKLTTDVLQIGQVLVI 263
>gi|320161126|ref|YP_004174350.1| hypothetical protein ANT_17240 [Anaerolinea thermophila UNI-1]
gi|319994979|dbj|BAJ63750.1| hypothetical protein ANT_17240 [Anaerolinea thermophila UNI-1]
Length = 389
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 95 ASCRTVE--IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
A+C +E + DTL +S YGVS AI++ NGL GD I+ G+KLIIP
Sbjct: 207 AACEKLEYTVTETDTLSKISANYGVSAQAIRDYNGLPGDIIFPGQKLIIP 256
>gi|326389792|ref|ZP_08211356.1| cell wall hydrolase SleB [Thermoanaerobacter ethanolicus JW 200]
gi|325994060|gb|EGD52488.1| cell wall hydrolase SleB [Thermoanaerobacter ethanolicus JW 200]
Length = 267
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P S T + +GD+L+ ++ KYG+++D +K ANG D IY G+ IIP
Sbjct: 72 PGSDNTYVVQKGDSLYLIALKYGITVDMLKSANGYKSDIIYPGQVFIIP 120
Score = 42.0 bits (97), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTLWG+S+KYG + + NGL IY G+ L +P
Sbjct: 35 GDTLWGISQKYGTTYTKLMSLNGLQNTIIYPGQVLQVP 72
>gi|347449253|gb|AEO93294.1| gp23 [Bacillus phage G]
Length = 556
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T +V+GDTL+G+S+K+G+S+D IK NGL +TI G+ L
Sbjct: 204 TYTVVKGDTLYGISQKFGISVDTIKSLNGLKTNTISIGQVL 244
>gi|227115183|ref|ZP_03828839.1| N-acetylmuramoyl-L-alanine amidase [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 556
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 68 TQPIQPPPQQPIVTKPSICTEKS---------EPEPASCRTVEIVRGDTLWGLSRKYGVS 118
T PIQ P+Q + S ++++ + S R + RG+TL ++R+YGVS
Sbjct: 409 THPIQSLPKQESRPRQSAASDRATSGGNVTAAKASAGSMRHT-VARGETLSSIARRYGVS 467
Query: 119 IDAIKEANGLSGDTIYAGKKLIIP 142
+ A+++ N L+ D ++ G++L IP
Sbjct: 468 LAAMRDVNKLNKDIVWVGQRLNIP 491
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G++++ ++ +N LNK+ I Q + P T P+ A+
Sbjct: 465 GVSLAAMRDVNKLNKD---------IVWVGQRLNIP-----ATGTRQAASTPAPKKAAPV 510
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++V+GD+L ++ +YGVS+ I++AN + T+ G+ L+IP
Sbjct: 511 KHKVVKGDSLSAIAARYGVSMKEIQQANNMRSGTVQLGQTLVIP 554
>gi|16079001|ref|NP_389823.1| peptidoglycan hydrolase [Bacillus subtilis subsp. subtilis str.
168]
gi|221309840|ref|ZP_03591687.1| hypothetical protein Bsubs1_10716 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221314162|ref|ZP_03595967.1| hypothetical protein BsubsN3_10637 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221319085|ref|ZP_03600379.1| hypothetical protein BsubsJ_10568 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221323358|ref|ZP_03604652.1| hypothetical protein BsubsS_10682 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402776191|ref|YP_006630135.1| peptidoglycan hydrolase [Bacillus subtilis QB928]
gi|452915933|ref|ZP_21964558.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS
[Bacillus subtilis MB73/2]
gi|30913469|sp|O31852.1|CWLS_BACSU RecName: Full=D-gamma-glutamyl-meso-diaminopimelic acid
endopeptidase CwlS; AltName: Full=Cell wall lytic enzyme
associated with cell separation; Flags: Precursor
gi|2634334|emb|CAB13833.1| peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase)
[Bacillus subtilis subsp. subtilis str. 168]
gi|3169328|gb|AAC17860.1| YojL [Bacillus subtilis subsp. subtilis str. 168]
gi|402481372|gb|AFQ57881.1| Peptidoglycan hydrolase (cell wall-bindingd,l-endopeptidase)
[Bacillus subtilis QB928]
gi|407959365|dbj|BAM52605.1| peptidoglycan hydrolase [Bacillus subtilis BEST7613]
gi|407964941|dbj|BAM58180.1| peptidoglycan hydrolase [Bacillus subtilis BEST7003]
gi|452114943|gb|EME05340.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS
[Bacillus subtilis MB73/2]
Length = 414
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA +T+++ GD+LW LSR+Y +I A+K N L +Y G+ L +P
Sbjct: 23 PAEAKTIKVKSGDSLWKLSRQYDTTISALKSENKLKSTVLYVGQSLKVP 71
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+ ++ LK LN L ++T P+ + + P KPS P+ T
Sbjct: 176 MTVAELKTLNGLT---SDTLYPKQVLKIKGSSSPKNGNSGSKKPS------NSNPSKTTT 226
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ GD+LW ++ + GV++ +I++ N LS D + G+ L I
Sbjct: 227 YKVKAGDSLWKIANRLGVTVQSIRDKNNLSSDVLQIGQVLTI 268
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW +++ + +S+ +K N LS D I G+KL I
Sbjct: 89 TYTVAYGDSLWMIAKNHKMSVSELKSLNSLSSDLIRPGQKLKI 131
>gi|403060150|ref|YP_006648367.1| N-acetylmuramoyl-L-alanine amidase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402807476|gb|AFR05114.1| N-acetylmuramoyl-L-alanine amidase [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 556
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 68 TQPIQPPPQQPIVTKPSICTEKS---------EPEPASCRTVEIVRGDTLWGLSRKYGVS 118
T PIQ P+Q + S ++++ + S R + RG+TL ++R+YGVS
Sbjct: 409 THPIQSLPKQESRPRQSAASDRATSGGSVTAAKASAGSTRHT-VARGETLSSIARRYGVS 467
Query: 119 IDAIKEANGLSGDTIYAGKKLIIP 142
+ A+++ N L+ D ++ G++L IP
Sbjct: 468 LAAMRDVNKLNKDIVWVGQRLNIP 491
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G++++ ++ +N LNK+ I Q + P T P+ A+
Sbjct: 465 GVSLAAMRDVNKLNKD---------IVWVGQRLNIPA-----TGTRQAASTPAPKKAAPV 510
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++V+GD+L ++ +YGVS+ I++AN + T+ G+ L+IP
Sbjct: 511 KHKVVKGDSLSAIAARYGVSMKEIQQANNMRSGTVQLGQTLVIP 554
>gi|312128292|ref|YP_003993166.1| peptidoglycan-binding lysin domain-containing protein
[Caldicellulosiruptor hydrothermalis 108]
gi|311778311|gb|ADQ07797.1| Peptidoglycan-binding lysin domain protein [Caldicellulosiruptor
hydrothermalis 108]
Length = 507
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW LS+ +G SI+ IK N L+ DT+Y G+KLI+
Sbjct: 162 GDSLWILSQTFGTSIETIKSLNSLTSDTLYVGQKLIV 198
>gi|302875839|ref|YP_003844472.1| Peptidoglycan-binding lysin domain [Clostridium cellulovorans 743B]
gi|307689272|ref|ZP_07631718.1| Peptidoglycan-binding lysin domain [Clostridium cellulovorans 743B]
gi|302578696|gb|ADL52708.1| Peptidoglycan-binding lysin domain [Clostridium cellulovorans 743B]
Length = 409
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+V GDTLWG+SR YG ++DAI + N L+ T+ G++L+I
Sbjct: 80 VVAGDTLWGISRLYGTTVDAIMKQNNLTTSTLKIGQELLI 119
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T +V GDTLWGLS KY ++D+I + N L+ T+ G+ L+I
Sbjct: 145 THTVVSGDTLWGLSVKYKTTVDSIMKLNNLTSTTLKIGQVLVI 187
Score = 43.1 bits (100), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T +V GDTL G+++ Y V+ID++K NGL+ D I G+ L
Sbjct: 30 ANTYTVVAGDTLGGIAKTYNVTIDSLKRWNGLTSDIIKIGQTL 72
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++V GD LW ++ +YG ++D I ++N L + + + L IP
Sbjct: 209 KVVSGDNLWNIATRYGTTMDTIMKSNMLVSNILMPNQILTIP 250
>gi|222528577|ref|YP_002572459.1| peptidoglycan-binding protein LysM [Caldicellulosiruptor bescii DSM
6725]
gi|222455424|gb|ACM59686.1| Peptidoglycan-binding LysM [Caldicellulosiruptor bescii DSM 6725]
Length = 507
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW LS+ +G SI+ IK N L+ DT+Y G+KLI+
Sbjct: 162 GDSLWILSQTFGTSIETIKNLNSLTSDTLYVGQKLIV 198
>gi|347752131|ref|YP_004859696.1| NLP/P60 protein [Bacillus coagulans 36D1]
gi|347584649|gb|AEP00916.1| NLP/P60 protein [Bacillus coagulans 36D1]
Length = 473
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ +IV GDTL G+++KYGV + +KE N LS D IYAG L I
Sbjct: 77 KKYKIVSGDTLSGIAKKYGVKVSQLKEWNNLSSDLIYAGDTLKI 120
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T +IV+GDTL G+++K+GV++ +KE N LS D I AG L
Sbjct: 183 TYQIVKGDTLSGVAQKFGVTVSQLKEWNHLSSDWIVAGSAL 223
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T S+ + E A T + +GD+LW +S++Y ++ IK N L+GD IY +K
Sbjct: 13 MTLASLIVGSASTEAA---TYTVKKGDSLWKISQQYHTTVSQIKNDNHLTGDIIYPNQKF 69
Query: 140 IIP 142
+P
Sbjct: 70 KVP 72
>gi|384175726|ref|YP_005557111.1| endopeptidase LytF [Bacillus subtilis subsp. subtilis str. RO-NN-1]
gi|349594950|gb|AEP91137.1| endopeptidase LytF [Bacillus subtilis subsp. subtilis str. RO-NN-1]
Length = 411
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA +T+++ GD+LW LSR+Y +I A+K N L +Y G+ L +P
Sbjct: 23 PAEAKTIKVKSGDSLWKLSRQYDTTISALKSENKLKSTVLYVGQSLKVP 71
Score = 42.0 bits (97), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+ ++ LK LN L ++T P+ + + P KPS P+ T
Sbjct: 176 MTVAELKTLNGLT---SDTLYPKQVLKIKGSSSPKNGNSGSKKPS------NSNPSKTTT 226
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ GD+LW ++ + GV++ +I++ N LS D + G+ L I
Sbjct: 227 YKVKAGDSLWKIANRLGVTVQSIRDKNNLSSDVLQIGQVLTI 268
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW +++ + +S+ +K N LS D I G+KL I
Sbjct: 89 TYTVAYGDSLWMIAKNHKMSVSELKSLNSLSSDLIRPGQKLKI 131
>gi|336391310|ref|ZP_08572709.1| peptidoglycan-binding lysin domain-containing protein
[Lactobacillus coryniformis subsp. torquens KCTC 3535]
Length = 378
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT--IYAGKKLIIP 142
A TV + DT+W S++YGV++D IK AN LSGD I G+KL IP
Sbjct: 27 ADAATVTVKANDTVWDFSQEYGVTVDQIKTANQLSGDNPIILIGQKLEIP 76
>gi|33594121|ref|NP_881765.1| membrane-bound lytic murein transglycosylase D precursor
[Bordetella pertussis Tohama I]
gi|384205423|ref|YP_005591162.1| putative membrane-bound lytic murein transglycosylase D [Bordetella
pertussis CS]
gi|408414279|ref|YP_006624986.1| membrane-bound lytic murein transglycosylase D [Bordetella
pertussis 18323]
gi|33564195|emb|CAE43480.1| putative membrane-bound lytic murein transglycosylase D precursor
[Bordetella pertussis Tohama I]
gi|332383537|gb|AEE68384.1| putative membrane-bound lytic murein transglycosylase D precursor
[Bordetella pertussis CS]
gi|401776449|emb|CCJ61641.1| putative membrane-bound lytic murein transglycosylase D precursor
[Bordetella pertussis 18323]
Length = 469
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RT ++ GDTL+GL+RKYG S+ A++ N L G+ + G +L IP
Sbjct: 417 NVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIP 463
>gi|333395337|ref|ZP_08477156.1| peptidoglycan-binding lysin domain-containing protein
[Lactobacillus coryniformis subsp. coryniformis KCTC
3167]
Length = 374
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT--IYAGKKLIIP 142
A TV + DT+W S++YGV++D IK AN LSGD I G+KL IP
Sbjct: 27 ADAATVTVKANDTVWDFSQEYGVTVDQIKTANQLSGDNPIILIGQKLEIP 76
>gi|308188272|ref|YP_003932403.1| N-acetylmuramoyl-L-alanine amidase [Pantoea vagans C9-1]
gi|308058782|gb|ADO10954.1| N-acetylmuramoyl-L-alanine amidase [Pantoea vagans C9-1]
Length = 556
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 66 ESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEA 125
E +P+ P + + P T ++ A+ R + RG+TL G++ KYGVS+D ++E
Sbjct: 420 EENRPLGSSPAVSVASNP--ATGVTQYTGATQRHT-VTRGETLSGIAAKYGVSMDTLREM 476
Query: 126 NGLSGDTIYAGKKLIIP 142
N L D ++ G++L +P
Sbjct: 477 NTLKRDVVWVGQRLKVP 493
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 90 SEPEPASCRTV---EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
S PA+ R V ++V GD+L G++ YGVS AI + N L + G+ L IP
Sbjct: 499 SRTAPATPRGVVRHKVVVGDSLTGIAAHYGVSPKAIMQTNNLKSTNVMLGQNLKIP 554
>gi|94985794|ref|YP_605158.1| peptidoglycan-binding LysM [Deinococcus geothermalis DSM 11300]
gi|94556075|gb|ABF45989.1| Peptidoglycan-binding LysM domain-containing protein [Deinococcus
geothermalis DSM 11300]
Length = 444
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 61/111 (54%), Gaps = 17/111 (15%)
Query: 33 GFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEP 92
G SG+++ LKALN L +N T +P Q ++ + P T T K
Sbjct: 37 GIAQRSGLSVERLKALNGL---KNNTIRP------GQTLRLSGKAPAPT-----TTKVRS 82
Query: 93 EPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PAS +V +VR GDTL ++R+ GVS+ A++ ANGLSG I G++L +P
Sbjct: 83 APAS--SVYLVRPGDTLGQIARRAGVSVAALRAANGLSGSLIRPGQRLRLP 131
Score = 38.5 bits (88), Expect = 0.93, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
V + RGDTL+G++++ G+S++ +K NGL +TI G+ L
Sbjct: 27 VTVKRGDTLYGIAQRSGLSVERLKALNGLKNNTIRPGQTL 66
>gi|33598346|ref|NP_885989.1| membrane-bound lytic murein transglycosylase D precursor
[Bordetella parapertussis 12822]
gi|33566904|emb|CAE39120.1| putative membrane-bound lytic murein transglycosylase D precursor
[Bordetella parapertussis]
Length = 469
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RT ++ GDTL+GL+RKYG S+ A++ N L G+ + G +L IP
Sbjct: 417 NVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIP 463
>gi|410421738|ref|YP_006902187.1| membrane-bound lytic murein transglycosylase D [Bordetella
bronchiseptica MO149]
gi|427819778|ref|ZP_18986841.1| putative membrane-bound lytic murein transglycosylase D precursor
[Bordetella bronchiseptica D445]
gi|427825222|ref|ZP_18992284.1| putative membrane-bound lytic murein transglycosylase D precursor
[Bordetella bronchiseptica Bbr77]
gi|408449033|emb|CCJ60719.1| putative membrane-bound lytic murein transglycosylase D precursor
[Bordetella bronchiseptica MO149]
gi|410570778|emb|CCN18976.1| putative membrane-bound lytic murein transglycosylase D precursor
[Bordetella bronchiseptica D445]
gi|410590487|emb|CCN05577.1| putative membrane-bound lytic murein transglycosylase D precursor
[Bordetella bronchiseptica Bbr77]
Length = 469
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RT ++ GDTL+GL+RKYG S+ A++ N L G+ + G +L IP
Sbjct: 417 NVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIP 463
>gi|33603256|ref|NP_890816.1| membrane-bound lytic murein transglycosylase D precursor
[Bordetella bronchiseptica RB50]
gi|410474364|ref|YP_006897645.1| membrane-bound lytic murein transglycosylase D [Bordetella
parapertussis Bpp5]
gi|412341415|ref|YP_006970170.1| membrane-bound lytic murein transglycosylase D [Bordetella
bronchiseptica 253]
gi|427816266|ref|ZP_18983330.1| putative membrane-bound lytic murein transglycosylase D precursor
[Bordetella bronchiseptica 1289]
gi|33577380|emb|CAE34645.1| putative membrane-bound lytic murein transglycosylase D precursor
[Bordetella bronchiseptica RB50]
gi|408444474|emb|CCJ51222.1| putative membrane-bound lytic murein transglycosylase D precursor
[Bordetella parapertussis Bpp5]
gi|408771249|emb|CCJ56049.1| putative membrane-bound lytic murein transglycosylase D precursor
[Bordetella bronchiseptica 253]
gi|410567266|emb|CCN24837.1| putative membrane-bound lytic murein transglycosylase D precursor
[Bordetella bronchiseptica 1289]
Length = 469
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RT ++ GDTL+GL+RKYG S+ A++ N L G+ + G +L IP
Sbjct: 417 NVRTHKVSSGDTLFGLARKYGTSVGALRALNNLKGNNLKLGSQLRIP 463
>gi|386758697|ref|YP_006231913.1| peptidoglycan hydrolase [Bacillus sp. JS]
gi|384931979|gb|AFI28657.1| peptidoglycan hydrolase [Bacillus sp. JS]
Length = 412
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA +T+++ GD+LW LSR+Y +I A+K N L +Y G+ L +P
Sbjct: 23 PAEAKTIKVKSGDSLWKLSRQYDTTISALKSENKLKSTVLYVGQSLKVP 71
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GD+LW +++ + +S+ +K NGLS D I G+KL I
Sbjct: 93 VAYGDSLWMIAKNHKMSVSELKSLNGLSSDLIRPGQKLKI 132
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GD+LW ++ + GV++ +I++ N LS D + G+ L I
Sbjct: 227 TYKVKAGDSLWKIANQLGVTVQSIRDKNNLSSDVLQIGQVLTI 269
>gi|385265068|ref|ZP_10043155.1| CwlS [Bacillus sp. 5B6]
gi|385149564|gb|EIF13501.1| CwlS [Bacillus sp. 5B6]
Length = 413
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ T PA +T+++ GD+LW LSR+Y SI A++ N L ++ G++L IP
Sbjct: 13 AVMTSTFAVHPAEAKTIQVKSGDSLWKLSRQYHTSISALQAENKLKSTILHPGQRLNIP 71
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S + GD+LW +++KY +S+ ++ N LS D IY G+KL I
Sbjct: 86 STGAYTVTYGDSLWVIAKKYKMSVSELRSLNRLSSDVIYPGQKLKI 131
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 18/108 (16%)
Query: 38 SGIAISILKALNPLNKNRNETTQPQPIAESTQP----IQPPPQQPIVTKPSICTEKSEPE 93
+GI I+ LK LN L+ + Q I S+ PP KPS
Sbjct: 170 TGITIAELKKLNQLSSDMLYPNQVLKIKGSSHNGNSGTTPPSHSNPSEKPS--------- 220
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GD+LW ++ ++G++ I+E N L+ D + G+ L+I
Sbjct: 221 -----TYKVKAGDSLWKIANRFGITAQLIREKNKLTTDVLQIGQVLVI 263
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 32/54 (59%)
Query: 88 EKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+++P+ + T + GD+LW ++ + G++I +K+ N LS D +Y + L I
Sbjct: 143 RQTKPDKGASGTYTVKPGDSLWKIANQTGITIAELKKLNQLSSDMLYPNQVLKI 196
>gi|257871268|ref|ZP_05650921.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus gallinarum EG2]
gi|257805432|gb|EEV34254.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus gallinarum EG2]
Length = 702
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW L++KYG SID I N LS + IY G+KLI+
Sbjct: 665 GDSLWSLAQKYGSSIDQITSWNRLSNNIIYVGQKLIV 701
>gi|357051553|ref|ZP_09112735.1| hypothetical protein HMPREF9478_02718 [Enterococcus saccharolyticus
30_1]
gi|355379715|gb|EHG26870.1| hypothetical protein HMPREF9478_02718 [Enterococcus saccharolyticus
30_1]
Length = 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW L++KYG SID I N LS + IY G+KLI+
Sbjct: 658 GDSLWSLAQKYGSSIDQITSWNRLSNNIIYVGQKLIV 694
>gi|332286826|ref|YP_004418737.1| membrane-bound lytic murein transglycosylase D [Pusillimonas sp.
T7-7]
gi|330430779|gb|AEC22113.1| membrane-bound lytic murein transglycosylase D [Pusillimonas sp.
T7-7]
Length = 460
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 63/128 (49%), Gaps = 17/128 (13%)
Query: 26 AAVAKTAGFVVFSGIAISILKALNPLNKNRNET---TQPQPIAESTQPIQPP----PQQP 78
AA+AK GI++ L+A+N L+K ++ T P + IQ P+ P
Sbjct: 333 AAIAKR------HGISLGTLRAVNGLSKKQSRAVAQTLLVPANHTRGGIQLASLEVPESP 386
Query: 79 IVTKPSICTEKSE----PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
T+ KS+ A+ RT + GDTL+ L+++Y S+D +++ N L G +
Sbjct: 387 TTTQGKSPRNKSDVRVLRRGANVRTHTVKGGDTLFSLAKRYNTSVDELRKLNNLKGSILS 446
Query: 135 AGKKLIIP 142
GK+L +P
Sbjct: 447 KGKRLRVP 454
>gi|268315790|ref|YP_003289509.1| lytic transglycosylase [Rhodothermus marinus DSM 4252]
gi|262333324|gb|ACY47121.1| Lytic transglycosylase catalytic [Rhodothermus marinus DSM 4252]
Length = 733
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Query: 58 TTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGV 117
T QP + S++ P ++ S TE PE + + RGD L +++KYGV
Sbjct: 544 TAQPTALETSSEERNEPSRE----TTSATTESRTPEAPTRVVYTVRRGDALSEIAQKYGV 599
Query: 118 SIDAIKEANGLSGDTIYAGKKLII 141
S+ IK N LSG+TI G++L++
Sbjct: 600 SVADIKRWNNLSGNTIRVGQELVL 623
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 24/115 (20%)
Query: 37 FSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPAS 96
+G ++ L+ALNP E Q PP + P + + + E +
Sbjct: 401 LAGTDVATLRALNP---------------ELRQNTLPPSRGPYFIRLPLGSYARFAEAYA 445
Query: 97 ---------CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T + RGD L ++R++GVS+ A+ ANGL I G++LI+P
Sbjct: 446 RLPEDRKRPVTTYTVRRGDALSIIARRFGVSVSALMRANGLHSTVIRPGQRLIVP 500
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
SEP + RGDTL +++++GVS+ AIK N L +TI G++L I
Sbjct: 626 SEPVTPERVVYTVRRGDTLSEIAQRFGVSVTAIKRWNNLDDNTIQIGQRLTI 677
>gi|296133065|ref|YP_003640312.1| cell wall hydrolase SleB [Thermincola potens JR]
gi|296031643|gb|ADG82411.1| cell wall hydrolase SleB [Thermincola potens JR]
Length = 257
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P+ R E+ +GDTL+ ++RKY +S++ + NG++ I+ G+ LIIP
Sbjct: 69 PSQSRVYEVKKGDTLFRIARKYKISLNELMSVNGMNNTLIFPGQNLIIP 117
>gi|429205083|ref|ZP_19196363.1| NLP/P60 protein [Lactobacillus saerimneri 30a]
gi|428146692|gb|EKW98928.1| NLP/P60 protein [Lactobacillus saerimneri 30a]
Length = 430
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 93 EPASCRT-VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT--IYAGKKLIIP 142
+PAS T V+I GD++W ++KYGVSI +I+ N ++ DT IYAG L IP
Sbjct: 24 QPASANTTVKIQPGDSVWHFAQKYGVSIQSIETLNKINSDTHLIYAGASLEIP 76
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 15/110 (13%)
Query: 34 FVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPE 93
F G++I ++ LN +N + T I I T T K
Sbjct: 43 FAQKYGVSIQSIETLNKINSD-------------THLIYAGASLEIPTANKAATPKQTST 89
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT--IYAGKKLII 141
T + GDTLW ++R + +S+D+++ N ++ D I AG+ L +
Sbjct: 90 KPVTNTYVVKTGDTLWSIARAHNMSVDSLRSMNNIASDNDLIIAGQTLSV 139
>gi|319407535|emb|CBI81185.1| LysM/M23 peptidase domain protein [Bartonella sp. 1-1C]
Length = 380
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 31/38 (81%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL ++++ GVS+DA++ ANG++ ++IY G+ LIIP
Sbjct: 125 GDTLLSIAQQLGVSVDALRLANGINANSIYIGQSLIIP 162
>gi|308173904|ref|YP_003920609.1| CwlS [Bacillus amyloliquefaciens DSM 7]
gi|384159084|ref|YP_005541157.1| CwlS [Bacillus amyloliquefaciens TA208]
gi|384164499|ref|YP_005545878.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase cwlS
[Bacillus amyloliquefaciens LL3]
gi|384168124|ref|YP_005549502.1| hypothetical protein BAXH7_01516 [Bacillus amyloliquefaciens XH7]
gi|307606768|emb|CBI43139.1| CwlS [Bacillus amyloliquefaciens DSM 7]
gi|328553172|gb|AEB23664.1| CwlS [Bacillus amyloliquefaciens TA208]
gi|328912054|gb|AEB63650.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase cwlS
[Bacillus amyloliquefaciens LL3]
gi|341827403|gb|AEK88654.1| hypothetical protein BAXH7_01516 [Bacillus amyloliquefaciens XH7]
Length = 412
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ T PA +T+++ GD+LW LSR+Y SI A++ N L ++ G++L IP
Sbjct: 13 AVMTSTFAVHPAEAKTIQVKSGDSLWKLSRQYHTSISALQTENKLKSTILHPGQRLNIP 71
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 PSICTEKSEPE-PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
P T K++ + S + GD+LW +++KY +S+ ++ N LS D IY G+KL +
Sbjct: 71 PDGSTHKTDQKGKKSTGAYTVTYGDSLWVIAKKYRMSVSELRSLNRLSSDVIYPGQKLKV 130
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 47/110 (42%), Gaps = 24/110 (21%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
GI I+ LK LN L + P Q + TK S S P S
Sbjct: 170 GITIAELKKLNQLTSD-----------------MLYPNQVLKTKGSSHNGNSGATPPSHS 212
Query: 99 -------TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GD+LW ++ ++G++ I+E N L+ D + G+ L+I
Sbjct: 213 NPSEKPSTYKVKPGDSLWKIANRFGITAQLIREKNKLTTDVLQIGQVLVI 262
Score = 35.0 bits (79), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 30/47 (63%)
Query: 88 EKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
++++P+ + T + GD+LW ++ + G++I +K+ N L+ D +Y
Sbjct: 142 KQTKPDKGASGTYTVKPGDSLWKIANQIGITIAELKKLNQLTSDMLY 188
>gi|398801108|ref|ZP_10560356.1| N-acetylmuramoyl-L-alanine amidase [Pantoea sp. GM01]
gi|398092750|gb|EJL83156.1| N-acetylmuramoyl-L-alanine amidase [Pantoea sp. GM01]
Length = 553
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 40 IAISILKALNPLNKNRNETTQPQPI-AESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
IA SI K L +N T Q I E +P+ P + + P+ T + + +
Sbjct: 397 IAQSIYKGL----RNYFLTHPLQSIPKEENRPLDSAPAVSVASNPATGTVQ---YTGATQ 449
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RG+TL G++ KYGVS+ ++E N L D ++ G++L +P
Sbjct: 450 RHTVTRGETLSGIAAKYGVSMATLREMNSLKRDVVWVGQRLKVP 493
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++VRGD+L ++ YGVS AI +AN + + G+ L IP
Sbjct: 510 KVVRGDSLTAIAAHYGVSSKAIMQANNMKSSNVMLGQNLKIP 551
>gi|366090636|ref|ZP_09457002.1| autolysin [Lactobacillus acidipiscis KCTC 13900]
Length = 538
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQP----IQPPPQQPIVTKPSICTEKSEPEP 94
G+ ++ LK+LN L N Q + ST+ P +P ++P+ T+ S+P
Sbjct: 355 GMTVASLKSLNNLTSNNIYVGQKLKLTGSTESNNGSANSQPSKPTNSQPNQPTQ-SKPAD 413
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ +T ++ + D+LW +++KY ++ ++ N L D IY + L +
Sbjct: 414 SNSQTYKVQKKDSLWSIAQKYQTTVANLRAWNNLKSDIIYVDQTLKV 460
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 106 DTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKK 138
D+LW ++ +G+S+ +K N LS D IY G+K
Sbjct: 499 DSLWSIAHSHGLSVAQLKSINKLSSDLIYVGQK 531
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 28/46 (60%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P + + GDTL+ ++ +G+++ ++K N L+ + IY G+KL
Sbjct: 333 PTANGQYSVKSGDTLYHIATTHGMTVASLKSLNNLTSNNIYVGQKL 378
>gi|398827610|ref|ZP_10585819.1| metalloendopeptidase-like membrane protein [Phyllobacterium sp.
YR531]
gi|398219427|gb|EJN05906.1| metalloendopeptidase-like membrane protein [Phyllobacterium sp.
YR531]
Length = 420
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T ++ GDTL +SRK G +IDAIK+AN + T+ G+ LIIP
Sbjct: 176 TYKVQSGDTLHAISRKTGANIDAIKQANNMQDGTVRLGQSLIIP 219
>gi|311068616|ref|YP_003973539.1| peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase)
[Bacillus atrophaeus 1942]
gi|419820744|ref|ZP_14344353.1| peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase)
[Bacillus atrophaeus C89]
gi|310869133|gb|ADP32608.1| peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase)
[Bacillus atrophaeus 1942]
gi|388475218|gb|EIM11932.1| peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase)
[Bacillus atrophaeus C89]
Length = 418
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P +T+++ GD+LW LSR+Y SI A++ N L +YAG+ L IP
Sbjct: 23 PVEAKTIKVKSGDSLWKLSRQYNTSIAALQSENQLKTSMLYAGQSLKIP 71
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+ I+ LK LN L +++T P+ + + KP S + T
Sbjct: 178 MTIAELKTLNGL---KSDTLYPKQVLKVKGTSSSNSGSSGSKKP----PNSGNDTVKTST 230
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ GD+LW ++ + G+++ +I+E N LS D + G+ L +
Sbjct: 231 YKVKSGDSLWKIANQLGITVQSIREKNNLSSDVLRIGQVLTV 272
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 88 EKSEPEPASCR---TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+KS P S + + GD+LW +++ + +SI +K N LS D I G+KL I
Sbjct: 75 KKSTSSPKSTNKTSSYTVTYGDSLWMIAKNHNMSISELKSLNSLSSDLIRPGQKLKI 131
>gi|152975610|ref|YP_001375127.1| cell wall hydrolase SleB [Bacillus cytotoxicus NVH 391-98]
gi|152024362|gb|ABS22132.1| cell wall hydrolase SleB [Bacillus cytotoxicus NVH 391-98]
Length = 264
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ T S P A T + + DTL +S +YGVS+ ++K+AN + IYAG++L IP
Sbjct: 15 AMITLISSPVEADASTYTVKKNDTLSDISNQYGVSVQSLKQANNKTTSQIYAGERLTIP 73
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Query: 78 PIVTKPSICT-EKSEPEPASCRTV--EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
P V+KP T + E S V ++ RGDTL ++++Y VSI +K+ N ++ D IY
Sbjct: 73 PNVSKPKQHTPQYHAAESHSTYQVIYQVKRGDTLASIAQQYNVSIQLLKQNNHINSDKIY 132
Query: 135 AGKKLII 141
G+ L I
Sbjct: 133 IGQHLKI 139
>gi|398791898|ref|ZP_10552599.1| N-acetylmuramoyl-L-alanine amidase [Pantoea sp. YR343]
gi|398214626|gb|EJN01202.1| N-acetylmuramoyl-L-alanine amidase [Pantoea sp. YR343]
Length = 553
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 53/104 (50%), Gaps = 8/104 (7%)
Query: 40 IAISILKALNPLNKNRNETTQPQPI-AESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
IA SI K L +N T Q I E +P+ P + + P+ T + + +
Sbjct: 397 IAQSIYKGL----RNYFLTHPLQSIPKEENRPLDSAPAVSVASNPATGTVQ---YTGATQ 449
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RG+TL G++ KYGVS+ ++E N L D ++ G++L +P
Sbjct: 450 RHTVTRGETLSGIAAKYGVSMATLREMNSLKRDVVWVGQRLKVP 493
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++VRGD+L ++ +YGVS AI +AN + + G+ L IP
Sbjct: 510 KVVRGDSLTAIAARYGVSSKAIMQANNMKSSNVMLGQNLKIP 551
>gi|218779776|ref|YP_002431094.1| lytic transglycosylase [Desulfatibacillum alkenivorans AK-01]
gi|218761160|gb|ACL03626.1| Lytic transglycosylase catalytic [Desulfatibacillum alkenivorans
AK-01]
Length = 604
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RGD+LW ++++YG +I+ IKEAN L T+ G+KL IP
Sbjct: 508 VRRGDSLWNIAQRYGSTINDIKEANNLKTTTLSVGQKLTIP 548
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G++ LK LNP + R + T +P ++ PP + SI P
Sbjct: 388 GVSKETLKELNP--ELRYQITPEKPY-----DLKVPPGKSSDLLASIDRISKYAFPQDAY 440
Query: 99 TVE-IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ I RG+TL ++RKYG S+ IK AN + I AGK L +P
Sbjct: 441 VLHRIRRGETLSTIARKYGTSVSKIKRANSMHSTRIVAGKTLKVP 485
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 89 KSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLS-GDTIYAGKKLII 141
KS+ + RT + RGDT ++RK+G+S+ + NGL TIY G+K+++
Sbjct: 550 KSQTNASGSRTYVVKRGDTPSTIARKHGMSLKQLLALNGLHMKSTIYPGQKILV 603
>gi|319404543|emb|CBI78149.1| LysM/M23 peptidase domain protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 368
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 31/38 (81%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL ++++ GVS+DA++ ANG++ ++IY G+ LIIP
Sbjct: 113 GDTLLSIAQQLGVSVDALRLANGINANSIYIGQSLIIP 150
>gi|423611982|ref|ZP_17587843.1| hypothetical protein IIM_02697 [Bacillus cereus VD107]
gi|401246989|gb|EJR53333.1| hypothetical protein IIM_02697 [Bacillus cereus VD107]
Length = 265
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C + S + ++ TV+ + DTLW +S++YGVSI +IK+AN D + G++L IP
Sbjct: 20 VCNQ-SIADASTIHTVK--KNDTLWNISKQYGVSIQSIKQANNKVNDRTFIGEQLNIP 74
>gi|347449252|gb|AEO93293.1| gp22 [Bacillus phage G]
Length = 248
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T +V+GDTL+G+S+K+G+S+D IK NGL +TI G+ L
Sbjct: 204 TYTVVKGDTLYGISQKFGISVDTIKSLNGLKTNTISIGQVL 244
>gi|343510477|ref|ZP_08747703.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Vibrio
scophthalmi LMG 19158]
gi|342801944|gb|EGU37395.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Vibrio
scophthalmi LMG 19158]
Length = 572
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R ++ RGD L +++KYGVS+D+++ AN L D + G+ LIIP
Sbjct: 525 LRKHKVQRGDFLGKIAKKYGVSLDSLRRANNLKSDQLAVGQMLIIP 570
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 94 PASCRTVE--IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P +TV + +GD L ++ +Y VS+ AIK N L DT+ G+KL
Sbjct: 467 PVETKTVTHVVAKGDYLGKIASRYKVSVSAIKRENNLRSDTLKLGQKL 514
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ RG++L +++KYG S AI +AN L ++ G+ L IP
Sbjct: 412 KVSRGESLSVIAKKYGSSTKAIMQANNLKSSSLAIGQTLTIP 453
>gi|343516366|ref|ZP_08753404.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Vibrio sp. N418]
gi|342796377|gb|EGU32062.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Vibrio sp. N418]
Length = 572
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R ++ RGD L +++KYGVS+D+++ AN L D + G+ LIIP
Sbjct: 525 LRKHKVQRGDFLGKIAKKYGVSLDSLRRANNLKSDQLAVGQMLIIP 570
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 94 PASCRTVE--IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P +TV +V+GD L ++ +Y VS+ AIK N L DT+ G+KL
Sbjct: 467 PVETKTVTHVVVKGDYLGKIASRYKVSVAAIKRENNLRSDTLKLGQKL 514
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ RG++L +++KYG S AI +AN L ++ G+ L IP
Sbjct: 412 KVSRGESLSVIAKKYGSSTKAIMQANNLKSSSLAIGQTLTIP 453
>gi|217076537|ref|YP_002334253.1| LysM domain/M23/M37 peptidase domain protein [Thermosipho africanus
TCF52B]
gi|217036390|gb|ACJ74912.1| LysM domain/M23/M37 peptidase domain protein [Thermosipho africanus
TCF52B]
Length = 273
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 18/90 (20%)
Query: 71 IQPPPQQPIVTK-----PSICTEKSEPEPASCRT-------------VEIVRGDTLWGLS 112
IQP +++K PS+ + ++ +P + E+ +GDTL+ +S
Sbjct: 28 IQPGDTLYLISKEFNVSPSVILDWNDIDPYHLKVGQSIKIPQPNGIIYEVKQGDTLYDIS 87
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ ++DAIK+AN L IY G+KL IP
Sbjct: 88 LRFFTTVDAIKKANNLLSSFIYVGQKLFIP 117
>gi|395766830|ref|ZP_10447368.1| hypothetical protein MCS_00301 [Bartonella doshiae NCTC 12862]
gi|395415442|gb|EJF81876.1| hypothetical protein MCS_00301 [Bartonella doshiae NCTC 12862]
Length = 389
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL ++R+ GVS+D +K ANG+S ++IY G+ L+IP
Sbjct: 134 GDTLLSIARQIGVSVDELKLANGISNNSIYIGQLLMIP 171
>gi|148545022|ref|YP_001272392.1| NLP/P60 protein [Lactobacillus reuteri DSM 20016]
gi|184154356|ref|YP_001842697.1| hypothetical protein LAR_1701 [Lactobacillus reuteri JCM 1112]
gi|227364170|ref|ZP_03848267.1| NLP/P60 protein [Lactobacillus reuteri MM2-3]
gi|325683373|ref|ZP_08162889.1| NLP/P60 family protein [Lactobacillus reuteri MM4-1A]
gi|148532056|gb|ABQ84055.1| NLP/P60 protein [Lactobacillus reuteri DSM 20016]
gi|183225700|dbj|BAG26217.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227070809|gb|EEI09135.1| NLP/P60 protein [Lactobacillus reuteri MM2-3]
gi|324977723|gb|EGC14674.1| NLP/P60 family protein [Lactobacillus reuteri MM4-1A]
Length = 330
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
V++ GDT+WG +++Y ++D+I AN L+ + IY G++L+IP
Sbjct: 27 VQVQSGDTVWGFAQQYATTVDSISTANQLADPNVIYVGQQLVIP 70
>gi|315301761|ref|ZP_07872815.1| protein p60, partial [Listeria ivanovii FSL F6-596]
gi|313629870|gb|EFR97949.1| protein p60 [Listeria ivanovii FSL F6-596]
Length = 380
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 3/85 (3%)
Query: 58 TTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYG 116
TTQ P AE+ ++ + + K TE P + T V+ GDT+W LS KYG
Sbjct: 15 TTQVAPAAETKAEVKQSTEATALPKAETKTE--TPAVDTTATTYTVKSGDTIWALSSKYG 72
Query: 117 VSIDAIKEANGLSGDTIYAGKKLII 141
S+ I N LS +IY G+ L +
Sbjct: 73 TSVQNIMSWNNLSSSSIYVGQVLAV 97
>gi|240850249|ref|YP_002971642.1| putative virulence determinant [Bartonella grahamii as4aup]
gi|240267372|gb|ACS50960.1| putative virulence determinant [Bartonella grahamii as4aup]
Length = 393
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 84 SICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ + + P R IV+ GDTL +SR+ GVS++A+K ANG++ ++IY G+ L++P
Sbjct: 116 TLSRSQMDKSPIFRRNSYIVQSGDTLLSISRQIGVSVEALKLANGINSNSIYIGQVLVVP 175
>gi|255038208|ref|YP_003088829.1| lytic transglycosylase [Dyadobacter fermentans DSM 18053]
gi|254950964|gb|ACT95664.1| Lytic transglycosylase catalytic [Dyadobacter fermentans DSM 18053]
Length = 498
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEK--SEPEPAS 96
G++++ L+ N + +N Q I + + P + +P E+ ++
Sbjct: 392 GVSVASLRKWNHIRRNMIRRGQRLVIYKEVRETAPAARIAAKPRPQQKEEQVANQQRHTR 451
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
R + +GDTLW +S++YG+ I +K+ N + G++I G+KLII
Sbjct: 452 KRYHTVQKGDTLWIISQRYGLEIGQLKKRNKIRGNSIKPGQKLII 496
>gi|296132802|ref|YP_003640049.1| peptidoglycan-binding lysin domain-containing protein [Thermincola
potens JR]
gi|296031380|gb|ADG82148.1| Peptidoglycan-binding lysin domain protein [Thermincola potens JR]
Length = 320
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 91 EPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E +PA ++ GDTL+ L+ KYGVSID I AN ++ D + G++LIIP
Sbjct: 81 EAKPAEDFKYQVQSGDTLYDLAIKYGVSIDEIMLANKITSDKLSIGQELIIP 132
>gi|424836288|ref|ZP_18260941.1| Peptidoglycan-binding lysin domain protein [Clostridium sporogenes
PA 3679]
gi|365977241|gb|EHN13342.1| Peptidoglycan-binding lysin domain protein [Clostridium sporogenes
PA 3679]
Length = 345
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+V GDTLW LS +Y ++D IK+ N L+ DTI+ G+ L+I
Sbjct: 87 VVSGDTLWKLSVQYKTTVDKIKQLNNLTRDTIFIGQVLVIS 127
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 35/67 (52%)
Query: 76 QQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYA 135
Q +++ S T + ++ G+ LW +++KY S+DAI ++N L+ + +
Sbjct: 122 QVLVISSNSYNTNTTVSSKVKTTNHKVGVGENLWTVAQKYNTSMDAIMKSNMLASNILMP 181
Query: 136 GKKLIIP 142
G+ L +P
Sbjct: 182 GQILTVP 188
>gi|325283466|ref|YP_004256007.1| Peptidoglycan-binding lysin domain protein [Deinococcus
proteolyticus MRP]
gi|324315275|gb|ADY26390.1| Peptidoglycan-binding lysin domain protein [Deinococcus
proteolyticus MRP]
Length = 468
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 33/42 (78%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+TV + GDTLW ++++ GVS+ ++ ANGLSGDTI AG++L
Sbjct: 64 QTVTVQPGDTLWSIAQRTGVSVAGLRAANGLSGDTIRAGQQL 105
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 31/41 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RGDTL G+SR+ G+S+ ++ ANGL GD + AG++L +P
Sbjct: 126 VRRGDTLAGISRRTGISVADLRRANGLGGDFLAAGQRLRVP 166
>gi|332299995|ref|YP_004441916.1| Lytic transglycosylase catalytic [Porphyromonas asaccharolytica DSM
20707]
gi|332177058|gb|AEE12748.1| Lytic transglycosylase catalytic [Porphyromonas asaccharolytica DSM
20707]
Length = 454
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 12/99 (12%)
Query: 46 KALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRG 105
+AL L +N E Q I+E+ + I+ P T+KS+ A +T ++ RG
Sbjct: 365 EALIYLRRNHKEELSKQ-ISEAREEIKQAPAP---------TQKSKATKARYKTYKVRRG 414
Query: 106 DTLWGLSRKYGVSIDAIKEANGLSGDT--IYAGKKLIIP 142
D+L +++++GVS+ A+K ANGL G + G++L IP
Sbjct: 415 DSLAKIAKRHGVSVAALKRANGLKGRNPKLRPGQRLKIP 453
>gi|295704361|ref|YP_003597436.1| peptidoglycan-binding protein [Bacillus megaterium DSM 319]
gi|294802020|gb|ADF39086.1| peptidoglycan-binding protein [Bacillus megaterium DSM 319]
Length = 340
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 3/102 (2%)
Query: 38 SGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASC 97
+G ++ LK N ++ + Q I+ T + P P+ K + ++ P P++
Sbjct: 107 NGTSVQQLKDWNNISSHLIYVNQVLKIS-GTGTVSSSPSAPVQEKTN--ETQASPAPSNS 163
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
++ ++ GDT+W +++++G+SI +K+ N LS +TIY + L
Sbjct: 164 KSYKVQPGDTMWSVAQRHGISISQLKQWNNLSSNTIYINQVL 205
>gi|448937255|gb|AGE60795.1| cell wall hydrolase/autolysin [Bacillus phage Eoghan]
gi|448937411|gb|AGE60949.1| cell wall hydrolase/autolysin [Bacillus phage Taylor]
Length = 299
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S+P T ++ +GDTL+G++R++G+S+D +K+ NGL D I G+ L
Sbjct: 199 SKPSTPKGDTYKVQKGDTLYGIARQHGMSVDDLKKLNGLKSDIIRVGQTL 248
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 27/44 (61%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S T ++ +GDTL+G+++ +G ++ IK+ N L D I G L
Sbjct: 253 SSVTYKVKKGDTLYGIAKDHGTTVANIKKLNNLKSDLINIGDTL 296
>gi|20807498|ref|NP_622669.1| LysM repeat-containing protein [Thermoanaerobacter tengcongensis
MB4]
gi|20516027|gb|AAM24273.1| LysM-repeat proteins and domains [Thermoanaerobacter tengcongensis
MB4]
Length = 268
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P + T + +GD+L+ +++KYG+++DA+K AN D IY G+ IIP
Sbjct: 72 PGNDNTYVVQKGDSLYLIAKKYGITVDALKAANDYKSDIIYPGQVFIIP 120
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ A T + GDTLWG+S+KYG++ + NGL TIY G+ L +P
Sbjct: 23 QAAFAATYTVKPGDTLWGISQKYGITYTKLMALNGLQTTTIYPGQVLQVP 72
>gi|312130308|ref|YP_003997648.1| lytic transglycosylase [Leadbetterella byssophila DSM 17132]
gi|311906854|gb|ADQ17295.1| Lytic transglycosylase catalytic [Leadbetterella byssophila DSM
17132]
Length = 761
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+T + RG+TL+ +S+KYGVS++ IKE N L I AG+KL I
Sbjct: 655 TKTHTVARGETLFSISKKYGVSVNDIKELNNLGNSGIQAGQKLKI 699
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
Query: 90 SEPEPA-----SCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
SE +PA S T +V+ G+TL+ ++ +YGV+++ +K N + +T+ GKKLI+
Sbjct: 702 SEEKPAPKTSTSTTTYHVVKSGETLFSIANRYGVTVNQLKTWNNMKSNTLVKGKKLIV 759
>gi|257875779|ref|ZP_05655432.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus
EC20]
gi|257809945|gb|EEV38765.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus
EC20]
Length = 319
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ ++ + GDTLW ++ K+G ++DA+ NGLS + I G++LI+
Sbjct: 273 STAQSYHVASGDTLWDIANKFGTTVDALMATNGLSSEVIVVGQELIV 319
>gi|395784404|ref|ZP_10464242.1| hypothetical protein ME3_00898 [Bartonella melophagi K-2C]
gi|395423654|gb|EJF89848.1| hypothetical protein ME3_00898 [Bartonella melophagi K-2C]
Length = 379
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 94 PASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P S R IV+ GDTL ++R+ GVS++A+K ANG++ +I+ G+ LIIP
Sbjct: 120 PTSRRGSYIVQSGDTLLSIARQIGVSVEALKLANGMNNHSIHVGQVLIIP 169
>gi|392529450|ref|ZP_10276587.1| autolysin [Carnobacterium maltaromaticum ATCC 35586]
Length = 809
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LWG++ K+GVS+ +K N L D I+ G+KLI+
Sbjct: 349 TYTVKSGDSLWGIASKHGVSVANLKSWNNLKSDMIFVGQKLIV 391
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW ++ K+GVS+ +K N LS DTI+ G+ L I
Sbjct: 497 GDSLWAIANKHGVSVANLKAWNNLSSDTIHIGQTLTI 533
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 38 SGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASC 97
+G++++ LKA N L+ + Q I T P P + +
Sbjct: 579 NGVSVANLKAWNNLSSDTILVGQKLTIKGGTTTPAPNPGTG-------SNNGNGGGTTTG 631
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW ++ K VS+ +K N LS DTI+ G+KL I
Sbjct: 632 STYTVKSGDSLWAIANKNNVSVANLKAWNNLSSDTIHIGQKLTI 675
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW ++ K+GVS+ +K N L D I G+KL +
Sbjct: 417 SSTYTVKAGDSLWSIANKHGVSVANLKSWNNLKSDIILVGQKLTV 461
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+++ GD+LW ++ K G ++ +K N L D I G+ LI+
Sbjct: 767 KVISGDSLWVIANKNGTTVANLKAWNNLKSDVILVGQTLIV 807
>gi|347750968|ref|YP_004858533.1| NLP/P60 protein [Bacillus coagulans 36D1]
gi|347583486|gb|AEO99752.1| NLP/P60 protein [Bacillus coagulans 36D1]
Length = 416
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
S A +T ++ +GD+LW +++KY S+DA+K N L+ DTIY
Sbjct: 18 SFTSQAFAQTYKVQKGDSLWKIAKKYNTSVDALKSTNHLASDTIY 62
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T + GDTL G+S++YG+++ +K N LS D IYAG+KL
Sbjct: 230 TYTVKSGDTLSGISKQYGITVSKLKSLNNLSSDLIYAGQKL 270
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GDTL G+S+++G ++ +K N LS D I++G+KL
Sbjct: 165 GDTLSGISKQFGTTVSKLKSLNNLSSDLIFSGQKL 199
>gi|415884794|ref|ZP_11546722.1| hypothetical protein MGA3_06115 [Bacillus methanolicus MGA3]
gi|387590463|gb|EIJ82782.1| hypothetical protein MGA3_06115 [Bacillus methanolicus MGA3]
Length = 305
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL-IIP 142
A + + + +GDTLW S+KY V ++ IK+ NGLS D IY ++L I+P
Sbjct: 22 AQAKEIVVKKGDTLWDFSQKYDVKVEDIKKWNGLSSDIIYPNQELEILP 70
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLW ++R GV++ +K N L+ D I G L+I
Sbjct: 79 GDTLWDIARANGVTVQDLKTWNKLNSDLIIPGWNLVI 115
>gi|414083152|ref|YP_006991860.1| muramidase-2 [Carnobacterium maltaromaticum LMA28]
gi|412996736|emb|CCO10545.1| muramidase-2 [Carnobacterium maltaromaticum LMA28]
Length = 807
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LWG++ K+GVS+ +K N L D I+ G+KLI+
Sbjct: 349 TYTVKSGDSLWGIASKHGVSVANLKSWNNLKSDMIFVGQKLIV 391
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW ++ K+GVS+ +K N LS DTI+ G+ L I
Sbjct: 497 GDSLWAIANKHGVSVANLKAWNNLSSDTIHIGQTLTI 533
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW ++ K VS+ +K N LS DTI+ G+KL I
Sbjct: 637 GDSLWAIANKNNVSVANLKAWNNLSSDTIHIGQKLTI 673
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW ++ K+GVS+ +K N L D I G+KL +
Sbjct: 417 SSTYTVKAGDSLWSIANKHGVSVANLKSWNNLKSDIILVGQKLTV 461
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW ++ K VS+ +K N LS D I+ G+KL++
Sbjct: 707 GDSLWMIANKNNVSVANLKSWNKLSSDVIFVGQKLVL 743
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+++ GD+LW ++ K G ++ +K N L D I G+ LII
Sbjct: 765 KVISGDSLWVIANKNGTTVANLKAWNNLKSDVILVGQTLII 805
>gi|302392565|ref|YP_003828385.1| peptidase M23 [Acetohalobium arabaticum DSM 5501]
gi|302204642|gb|ADL13320.1| Peptidase M23 [Acetohalobium arabaticum DSM 5501]
Length = 354
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD+L+GL+ +Y VS+DAIK+AN L I G+KLIIP
Sbjct: 109 GDSLYGLAEEYDVSVDAIKQANDLKDSMIRVGQKLIIP 146
>gi|448937332|gb|AGE60871.1| cell wall hydrolase/autolysin [Bacillus phage Gemini]
gi|448937566|gb|AGE61102.1| cell wall hydrolase/autolysin [Bacillus phage Andromeda]
Length = 299
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S+P T ++ +GDTL+G++R++G+S+D +K+ NGL D I G+ L
Sbjct: 199 SKPSEPKGDTYKVQKGDTLYGIARQHGMSVDDLKKLNGLKSDIIRVGQTL 248
>gi|257866147|ref|ZP_05645800.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus
EC30]
gi|257872477|ref|ZP_05652130.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus
EC10]
gi|257800081|gb|EEV29133.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus
EC30]
gi|257806641|gb|EEV35463.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus
EC10]
Length = 319
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ ++ + GDTLW ++ K+G ++DA+ NGLS + I G++LI+
Sbjct: 273 STAQSYHVASGDTLWDIANKFGTTVDALMATNGLSSEVIVVGQELIV 319
>gi|52080634|ref|YP_079425.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|319645405|ref|ZP_07999637.1| YojL protein [Bacillus sp. BT1B_CT2]
gi|404489517|ref|YP_006713623.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS
[Bacillus licheniformis DSM 13 = ATCC 14580]
gi|423682597|ref|ZP_17657436.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase [Bacillus
licheniformis WX-02]
gi|52003845|gb|AAU23787.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase (major
autolysin) (CWBP49') [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52348510|gb|AAU41144.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS
[Bacillus licheniformis DSM 13 = ATCC 14580]
gi|317392291|gb|EFV73086.1| YojL protein [Bacillus sp. BT1B_CT2]
gi|383439371|gb|EID47146.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase [Bacillus
licheniformis WX-02]
Length = 435
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P +T+++ GD+LW LS +Y S+ A++ AN LS IY G+ L +P
Sbjct: 23 PVEAQTIKVKSGDSLWKLSAEYNTSVSALQSANNLSSTVIYVGQTLKVP 71
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW ++R Y ++ IK NGLS D IY G+KL+I
Sbjct: 96 TYTVKLGDSLWLIARDYKTTVQEIKNLNGLSSDMIYPGQKLVI 138
>gi|116332795|ref|YP_794322.1| aggregation promoting factor-like surface protein [Lactobacillus
brevis ATCC 367]
gi|116098142|gb|ABJ63291.1| Aggregation promoting factrelated surface protein [Lactobacillus
brevis ATCC 367]
Length = 191
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%)
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
V + +GD++W L+ KY SI+AI++AN L+ D IY G+ L +P
Sbjct: 34 VTVKQGDSVWSLANKYDSSINAIEKANSLNNDLIYVGQTLNVP 76
>gi|443634628|ref|ZP_21118801.1| peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase)
[Bacillus subtilis subsp. inaquosorum KCTC 13429]
gi|443345435|gb|ELS59499.1| peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase)
[Bacillus subtilis subsp. inaquosorum KCTC 13429]
Length = 411
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA +T+++ GD+LW LSR+Y +I +K N L +Y G+ L IP
Sbjct: 23 PAEAKTIKVKSGDSLWKLSRQYDTTISKLKSENKLKSSVLYVGQSLKIP 71
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Query: 51 LNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWG 110
++K ++E + Q ++ P T PS + K+ T + GD+LW
Sbjct: 48 ISKLKSENKLKSSVLYVGQSLKIPENSKKSTTPSSNSSKTS-------TYTVAYGDSLWM 100
Query: 111 LSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+++ + +S+ +K N LS D I G+KL I
Sbjct: 101 IAKNHKMSVSELKSLNSLSSDLIRPGQKLKI 131
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GD+LW ++ + GV++ +I++ N LS D + G+ L I
Sbjct: 226 TYKVKAGDSLWKIANQLGVTVQSIRDKNNLSSDVLQIGQVLTI 268
>gi|440800351|gb|ELR21390.1| LysM domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 404
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ + DTL GLS +YGV +D IK+AN L+ +I+A K L++P
Sbjct: 270 VAKTDTLAGLSLRYGVKVDDIKQANNLTSQSIFAHKFLLVP 310
>gi|381183657|ref|ZP_09892374.1| invasion associated secreted endopeptidase [Listeriaceae bacterium
TTU M1-001]
gi|380316444|gb|EIA19846.1| invasion associated secreted endopeptidase [Listeriaceae bacterium
TTU M1-001]
Length = 592
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%)
Query: 86 CTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + P AS ++ + GDTLWG++ ++D++KE N L D I+ G+KL++
Sbjct: 15 VTAFAAPTIASASSIVVESGDTLWGIAEANDTTVDSLKELNNLDSDKIFPGQKLVV 70
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 4/63 (6%)
Query: 83 PSICTEKSEPEPASCRT----VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKK 138
P+ E E PA+ T + GDTLW LS K+G S+ I N LS +IY G+
Sbjct: 155 PAPAKEGKETAPATQDTNVSSYTVKSGDTLWALSVKFGTSVQNIMSWNNLSSSSIYVGQN 214
Query: 139 LII 141
L +
Sbjct: 215 LAV 217
>gi|333923447|ref|YP_004497027.1| cell wall hydrolase SleB [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749008|gb|AEF94115.1| cell wall hydrolase SleB [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 274
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ GD+L+ +S++YG +++AIK N L GD IY G+KL IP
Sbjct: 50 VAAGDSLFLISQRYGTTVEAIKSVNQLKGDLIYPGQKLTIP 90
>gi|302812371|ref|XP_002987873.1| hypothetical protein SELMODRAFT_426628 [Selaginella moellendorffii]
gi|300144492|gb|EFJ11176.1| hypothetical protein SELMODRAFT_426628 [Selaginella moellendorffii]
Length = 136
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
+T EIV GDTL+ LSRK+G + AI+ ANG+ + IY G +I+P
Sbjct: 83 KTYEIVTGDTLYSLSRKFGTKVSAIQAANGIDDPELIYIGDVIIVP 128
>gi|433460110|ref|ZP_20417745.1| cell wall hydrolase LytE [Halobacillus sp. BAB-2008]
gi|432191892|gb|ELK48811.1| cell wall hydrolase LytE [Halobacillus sp. BAB-2008]
Length = 356
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDT+WGLS +Y SI IK NGL+ D IY G+ LI+
Sbjct: 35 GDTIWGLSHQYDGSISEIKSWNGLNSDIIYVGQNLIV 71
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GDTL G++ KYG S+ ++ N +SG IY G+K+
Sbjct: 168 GDTLSGIAYKYGTSVSKLRSLNNISGSMIYVGQKI 202
>gi|50122857|ref|YP_052024.1| N-acetylmuramoyl-L-alanine amidase [Pectobacterium atrosepticum
SCRI1043]
gi|49613383|emb|CAG76834.1| N-acetylmuramoyl-L-alanine amidase [Pectobacterium atrosepticum
SCRI1043]
Length = 556
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 66 ESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEA 125
+ ++P+QP + S+ K+ A + RG+TL ++R+Y VS+ A+++
Sbjct: 418 QESRPLQPAANDTAASDSSVTVAKTS---AGSSRHTVARGETLSSIARRYSVSLAAMRDV 474
Query: 126 NGLSGDTIYAGKKLIIP 142
N L+ D ++ G++L IP
Sbjct: 475 NKLNKDIVWVGQRLNIP 491
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 68/157 (43%), Gaps = 29/157 (18%)
Query: 1 MQSPEDSVPTPRVPAENDGSGDGREAAVAKTAG----FVVFSG-----------IAISIL 45
MQS P PA ND + VAKT+ V G ++++ +
Sbjct: 412 MQSLPKQESRPLQPAANDTAASDSSVTVAKTSAGSSRHTVARGETLSSIARRYSVSLAAM 471
Query: 46 KALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRG 105
+ +N LNK+ I Q + P T + +K+ P ++++G
Sbjct: 472 RDVNKLNKD---------IVWVGQRLNIPATGSKQTASTPVPKKAAPVKH-----KVIKG 517
Query: 106 DTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
D+L ++ +YGVS+ I++AN + ++ G+ LIIP
Sbjct: 518 DSLSAIAARYGVSMKEIQQANNMRSGSVQLGQTLIIP 554
>gi|410453998|ref|ZP_11307941.1| peptidoglycan-binding LysM [Bacillus bataviensis LMG 21833]
gi|409932678|gb|EKN69636.1| peptidoglycan-binding LysM [Bacillus bataviensis LMG 21833]
Length = 238
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 52/101 (51%), Gaps = 21/101 (20%)
Query: 61 PQPIAESTQPIQPPPQQPIVTKPSI--------CTEKS---EPEPASCRTVEIV-----R 104
PQ +AE QP+ P P V PS T+K+ +PEP T +++ +
Sbjct: 137 PQDVAE--QPVSSVPSTPSVPAPSSNNDAANKQVTDKNSQPQPEPVKSETNKVIYHTVTK 194
Query: 105 GDTLWGLSRKYGVS---IDAIKEANGLSGDTIYAGKKLIIP 142
DTL+ +S KY S ID IK+AN L G+ IY G+ L IP
Sbjct: 195 QDTLYKISMKYYQSQKGIDIIKKANKLQGEEIYVGQVLKIP 235
>gi|312794197|ref|YP_004027120.1| peptidoglycan-binding lysin domain [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312181337|gb|ADQ41507.1| Peptidoglycan-binding lysin domain [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 508
Score = 47.8 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW LS+ +G SI+ IK N L+ DT+Y G+KLI+
Sbjct: 163 GDSLWILSQMFGTSIEIIKSLNNLTSDTLYVGQKLIV 199
>gi|260893597|ref|YP_003239694.1| NLP/P60 protein [Ammonifex degensii KC4]
gi|260865738|gb|ACX52844.1| NLP/P60 protein [Ammonifex degensii KC4]
Length = 255
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
SE +PA+ V+ GD LW ++ KYGV++ + EANGL+ IY G+ L IP
Sbjct: 65 SEADPATTHVVQ--PGDCLWNIAVKYGVTVQDLMEANGLTSTIIYPGQVLAIP 115
>gi|387791184|ref|YP_006256249.1| lipoprotein [Solitalea canadensis DSM 3403]
gi|379654017|gb|AFD07073.1| lipoprotein [Solitalea canadensis DSM 3403]
Length = 298
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 80 VTKPSICTEKSEPEPASCRTVE--IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGK 137
+ K + +K AS +T+E + G+TL+ +SRKYGVS++ I NGL+ +++ G+
Sbjct: 78 INKKGLTLKKGATAVASGKTIEHTVATGETLFAISRKYGVSVEDIINLNGLTDNSVKIGQ 137
Query: 138 KLII 141
KL I
Sbjct: 138 KLKI 141
>gi|404451090|ref|ZP_11016063.1| transglycosylase family protein,LysM domain-containing protein
[Indibacter alkaliphilus LW1]
gi|403763252|gb|EJZ24229.1| transglycosylase family protein,LysM domain-containing protein
[Indibacter alkaliphilus LW1]
Length = 535
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 32/40 (80%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+++G+TL+ LS+KYGVS+D I+ NGL+ +TI G+K+ I
Sbjct: 493 VLQGETLFRLSQKYGVSVDDIRRWNGLTDNTIKVGQKITI 532
>gi|134300631|ref|YP_001114127.1| cell wall hydrolase SleB [Desulfotomaculum reducens MI-1]
gi|134053331|gb|ABO51302.1| cell wall hydrolase, SleB [Desulfotomaculum reducens MI-1]
Length = 277
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P A +V GD+L+ +S+K G+SI IK NGL+GD ++ G L IP
Sbjct: 22 PSTALAYQYTVVLGDSLYSISQKTGISIAKIKTTNGLTGDLLHPGHVLTIP 72
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL+ +S+K+G+S++ + +AN LS IY G++L IP
Sbjct: 97 GDTLYVISKKFGISLNVLMKANELSSSMIYPGQRLTIP 134
>gi|323702049|ref|ZP_08113717.1| cell wall hydrolase SleB [Desulfotomaculum nigrificans DSM 574]
gi|323532931|gb|EGB22802.1| cell wall hydrolase SleB [Desulfotomaculum nigrificans DSM 574]
Length = 274
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
A + GD+L+ +S++YG +++AIK N L GD IY G+KL IP
Sbjct: 43 AYASDYTVAAGDSLFLISQRYGTTVEAIKSVNQLKGDLIYPGQKLTIP 90
>gi|384083180|ref|ZP_09994355.1| cell wall hydrolase/autolysin [gamma proteobacterium HIMB30]
Length = 441
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+E+ RGDTL ++ +YG+S+ A+KE NGL + I+ G+KL +P
Sbjct: 395 IEVERGDTLSEIAARYGLSLQALKELNGLETNVIHLGQKLEVP 437
>gi|294056595|ref|YP_003550253.1| peptidoglycan-binding lysin domain-containing protein
[Coraliomargarita akajimensis DSM 45221]
gi|293615928|gb|ADE56083.1| Peptidoglycan-binding lysin domain protein [Coraliomargarita
akajimensis DSM 45221]
Length = 379
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPE--PAS 96
G++++ L N LNKN + + Q I+ P + T ++ + +P A+
Sbjct: 133 GVSVNELYVANGLNKN--------SVLKIGQEIKIPVEGGSATVSTVTADSYQPTDFTAA 184
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T + +GD L +++K+ S+ AIK AN S D I G++L+IP
Sbjct: 185 STTYTVRKGDNLSKIAKKFNSSVGAIKAANNKSSDVIKVGEELVIP 230
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 12/82 (14%)
Query: 62 QPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDA 121
+P+ +P PQQ + E S +T + +G++LW +SR YGVS++
Sbjct: 90 EPLEGPLEPYDAEPQQTV-----------EINETSYKTHTVQKGESLWKISRDYGVSVNE 138
Query: 122 IKEANGLSGDTIYA-GKKLIIP 142
+ ANGL+ +++ G+++ IP
Sbjct: 139 LYVANGLNKNSVLKIGQEIKIP 160
>gi|302871178|ref|YP_003839814.1| peptidoglycan-binding lysin domain [Caldicellulosiruptor
obsidiansis OB47]
gi|302574037|gb|ADL41828.1| Peptidoglycan-binding lysin domain [Caldicellulosiruptor
obsidiansis OB47]
Length = 362
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW LS+ +G SI+ +K N L+ DT+Y G+KLI+
Sbjct: 17 GDSLWILSQTFGTSIETLKSFNNLTNDTLYVGQKLIV 53
>gi|116334019|ref|YP_795546.1| cell wall-associated hydrolase [Lactobacillus brevis ATCC 367]
gi|116099366|gb|ABJ64515.1| Cell wall-associated hydrolase [Lactobacillus brevis ATCC 367]
Length = 532
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 32/45 (71%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+T + GDTLW L++ Y +++ +++AN L+GD + G++L+IP
Sbjct: 86 QTYTVKSGDTLWDLAQTYHLTVAQLQQANHLTGDGLSVGQQLVIP 130
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG--DTIYAGKKLII 141
A+ ++++ +GDT+W LS+KY ++ +++ NG+ D I+ G++L +
Sbjct: 31 ANADSIQVKQGDTVWDLSQKYHTTVANLEQKNGIDAQTDLIFVGQRLQV 79
>gi|297545285|ref|YP_003677587.1| peptidoglycan-binding domain 1 protein [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
gi|296843060|gb|ADH61576.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter
mathranii subsp. mathranii str. A3]
Length = 333
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 79 IVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAG 136
+V +PS+ + +P C T V+ GDTLW +++K+GVS+D + +AN L + IYAG
Sbjct: 105 VVPQPSLFPQPPLQKP--CPTYYTVQPGDTLWTIAQKFGVSLDELIKANYLLNPNMIYAG 162
Query: 137 KKLIIP 142
+ LIIP
Sbjct: 163 QTLIIP 168
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
GDTL+ +++K+ S+DAI N + IY G++LIIP
Sbjct: 13 GDTLFSIAKKFNTSVDAIITRNNIINPSLIYPGQRLIIP 51
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 94 PASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGD--TIYAGKKLIIP 142
P V I++ GDTLW +++ + +++AI +AN D IY G+++IIP
Sbjct: 251 PTLSGKVYIIKPGDTLWNIAKTFNTTVEAILKANPDIKDPNLIYPGQRIIIP 302
>gi|295702639|ref|YP_003595714.1| exported cell wall-binding protein [Bacillus megaterium DSM 319]
gi|294800298|gb|ADF37364.1| putative exported cell wall-binding protein [Bacillus megaterium
DSM 319]
Length = 427
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 104 RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
RGDTLW + + YGV+++ IKE NGL+ D ++ G++ I
Sbjct: 83 RGDTLWSIGQHYGVTVEEIKEWNGLTSDLVFPGEQFKI 120
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
T E+ +GDTLW +++ + VS+D +K+AN L+ IY
Sbjct: 29 TYEVQKGDTLWKIAQNHNVSVDELKDANNLTSTLIY 64
>gi|294497267|ref|YP_003560967.1| putative exported cell wall-binding protein [Bacillus megaterium QM
B1551]
gi|294347204|gb|ADE67533.1| putative exported cell wall-binding protein [Bacillus megaterium QM
B1551]
Length = 430
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 104 RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
RGDTLW + + YGV+++ IKE NGL+ D ++ G++ I
Sbjct: 83 RGDTLWSIGQHYGVTVEEIKEWNGLTSDLVFPGEQFKI 120
Score = 42.0 bits (97), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
T E+ +GDTLW +++ + VS+D +K+AN L+ IY
Sbjct: 29 TYEVQKGDTLWKIAQNHNVSVDELKDANNLTSTLIY 64
>gi|452852673|ref|YP_007494357.1| Lytic transglycosylase catalytic [Desulfovibrio piezophilus]
gi|451896327|emb|CCH49206.1| Lytic transglycosylase catalytic [Desulfovibrio piezophilus]
Length = 533
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 22/112 (19%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEP---- 94
G+ IS+LK +N R+ T P Q + P + S KS P
Sbjct: 367 GVPISVLKKVN---NTRSNTLHP------GQFVMVPG-----SGSSRAVAKSRPASGSKT 412
Query: 95 ---ASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
A+ R +VR GDTLW +S+K+G +++ IK +NGL + G+KL IP
Sbjct: 413 RAIAAQRGNYVVRNGDTLWSISKKFGTTVNTIKRSNGLRSSRLKIGQKLYIP 464
Score = 42.0 bits (97), Expect = 0.092, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 79 IVTKPSICTEKSEPEPASCRT----VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGD-TI 133
I ++ T+++ + +T ++ RGD LW ++R++GVS+ +++ N LS TI
Sbjct: 463 IPNNSNVATKQAAKDAGKVKTQLVRYKVRRGDNLWSIARRFGVSVSDLRKWNTLSAKGTI 522
Query: 134 YAGKKL 139
YAG++L
Sbjct: 523 YAGQRL 528
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 26/38 (68%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
G++ W +SR+YGV I +K+ N +T++ G+ +++P
Sbjct: 356 GESWWIISRRYGVPISVLKKVNNTRSNTLHPGQFVMVP 393
>gi|167037401|ref|YP_001664979.1| cell wall hydrolase SleB [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320115815|ref|YP_004185974.1| cell wall hydrolase SleB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166856235|gb|ABY94643.1| cell wall hydrolase, SleB [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319928906|gb|ADV79591.1| cell wall hydrolase SleB [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 267
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P S T + +GD+L+ ++ KYG+++D +K NG D IY G+ IIP
Sbjct: 72 PGSDNTYVVQKGDSLYLIALKYGITVDMLKSVNGYKSDIIYPGQVFIIP 120
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTLWG+S+KYG + + NGL IY G+ L +P
Sbjct: 35 GDTLWGISQKYGTTYTKLMSLNGLQSTVIYPGQVLQVP 72
>gi|302817539|ref|XP_002990445.1| hypothetical protein SELMODRAFT_428885 [Selaginella moellendorffii]
gi|300141830|gb|EFJ08538.1| hypothetical protein SELMODRAFT_428885 [Selaginella moellendorffii]
Length = 136
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
+T EIV GDTL+ LSRK+G + AI+ ANG+ + IY G +I+P
Sbjct: 83 KTYEIVTGDTLYSLSRKFGTKVSAIQAANGIDDPELIYIGDVIIVP 128
>gi|373853966|ref|ZP_09596764.1| Peptidoglycan-binding lysin domain protein [Opitutaceae bacterium
TAV5]
gi|372471833|gb|EHP31845.1| Peptidoglycan-binding lysin domain protein [Opitutaceae bacterium
TAV5]
Length = 383
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query: 47 ALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGD 106
AL P++ N E T P P+++ P P+ T P A+ + E+ +GD
Sbjct: 81 ALTPVDHNYGELT-PAPLSDP----APAGLTPVDTSPVPLAPV-----AATTSYEVQKGD 130
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGD-TIYAGKKLIIP 142
+LW ++RK+G+ + AN +SG+ T+ G+KL++P
Sbjct: 131 SLWTIARKHGIKTTELAAANNISGNATLRIGQKLVVP 167
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P + +V GDTL ++RK+GV + A++ AN L GD + G+ L IP
Sbjct: 178 SPTGSMSYTVVSGDTLGAIARKHGVKLAALRSANNLRGDNLRVGQVLTIP 227
>gi|253690085|ref|YP_003019275.1| cell wall hydrolase/autolysin [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756663|gb|ACT14739.1| cell wall hydrolase/autolysin [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 557
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 66 ESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEA 125
+ ++P+Q + ++ T K+ A + RG+TL ++R+YGVS+ A+++
Sbjct: 419 QESRPLQSAASDTATSSGNVSTAKAS---AGSTRHTVARGETLSSIARRYGVSLAAMRDV 475
Query: 126 NGLSGDTIYAGKKLIIP 142
N L+ D ++ G++L IP
Sbjct: 476 NKLNKDIVWVGQRLNIP 492
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G++++ ++ +N LNK+ I Q + P TK + T P+ A+
Sbjct: 466 GVSLAAMRDVNKLNKD---------IVWVGQRLNIPATG---TKQTASTP--APKKAAPV 511
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++V+GD+L ++ +YGVS+ I++AN + T+ G+ LIIP
Sbjct: 512 KHKVVKGDSLSAIAARYGVSMKDIQQANNMRSGTVQLGQTLIIP 555
>gi|395778346|ref|ZP_10458858.1| hypothetical protein MCU_00559 [Bartonella elizabethae Re6043vi]
gi|423715343|ref|ZP_17689567.1| hypothetical protein MEE_00768 [Bartonella elizabethae F9251]
gi|395417554|gb|EJF83891.1| hypothetical protein MCU_00559 [Bartonella elizabethae Re6043vi]
gi|395430179|gb|EJF96230.1| hypothetical protein MEE_00768 [Bartonella elizabethae F9251]
Length = 389
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 31/38 (81%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL ++R+ GVS++A+K ANG++ ++IY G+ L++P
Sbjct: 134 GDTLLSIARQVGVSVEALKSANGINSNSIYIGQVLVLP 171
>gi|84393189|ref|ZP_00991953.1| N-acetylmuramoyl-L-alanine amidase [Vibrio splendidus 12B01]
gi|84376241|gb|EAP93125.1| N-acetylmuramoyl-L-alanine amidase [Vibrio splendidus 12B01]
Length = 573
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R ++ RGD L ++ KYGVS+++I++AN L D++ G+ LIIP
Sbjct: 526 LRKHKVARGDYLGKIASKYGVSVNSIRQANKLRSDSLAVGQVLIIP 571
>gi|313886886|ref|ZP_07820590.1| transglycosylase SLT domain protein [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923683|gb|EFR34488.1| transglycosylase SLT domain protein [Porphyromonas asaccharolytica
PR426713P-I]
Length = 454
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 56/99 (56%), Gaps = 12/99 (12%)
Query: 46 KALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRG 105
+AL L +N E Q I+E+ + I+ + S T+KS+ A +T ++ RG
Sbjct: 365 EALIYLRRNHKEELSKQ-ISEAQEEIK---------QASAPTQKSKATKARYKTYKVRRG 414
Query: 106 DTLWGLSRKYGVSIDAIKEANGLSGDT--IYAGKKLIIP 142
D+L +++++GVS+ A+K ANGL G + G++L IP
Sbjct: 415 DSLAKIAKRHGVSVAALKRANGLKGRNPKLRPGQRLKIP 453
>gi|338733808|ref|YP_004672281.1| hypothetical protein SNE_A19130 [Simkania negevensis Z]
gi|336483191|emb|CCB89790.1| putative uncharacterized protein [Simkania negevensis Z]
Length = 375
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 29/39 (74%)
Query: 104 RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+GD+LWG+SR + +S++ I+EAN L D + G++L IP
Sbjct: 332 KGDSLWGVSRHFDISMEKIREANQLQSDVLTPGQRLQIP 370
>gi|305665792|ref|YP_003862079.1| membrane-bound lytic murein transglycosylase [Maribacter sp.
HTCC2170]
gi|88710558|gb|EAR02790.1| membrane-bound lytic murein transglycosylase, putative [Maribacter
sp. HTCC2170]
Length = 529
Score = 47.8 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 35/105 (33%), Positives = 53/105 (50%), Gaps = 13/105 (12%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASC- 97
G+ +S +K N L N Q I ++P+ + + T KS + S
Sbjct: 427 GVGVSQIKRWNGLRNNNLRVGQRLTIYS---------RKPVTSNRATKTTKSASQKISGV 477
Query: 98 -RTVEIVR-GDTLWGLSRKY-GVSIDAIKEANGLSGDTIYAGKKL 139
V VR GD+LW +SRKY G+SI+ ++E NG+SG+ + G KL
Sbjct: 478 GAKVHTVRSGDSLWTISRKYPGISIENLREWNGISGNNLKPGTKL 522
>gi|163868044|ref|YP_001609248.1| putative virulence determinant [Bartonella tribocorum CIP 105476]
gi|161017695|emb|CAK01253.1| putative virulence determinant [Bartonella tribocorum CIP 105476]
Length = 389
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 84 SICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ + + P R IV+ GDTL ++R+ GVS++A+K ANG++ ++IY G+ L++P
Sbjct: 112 TLSRSQMDNSPIFRRNSYIVQSGDTLLSIARQVGVSVEALKSANGINSNSIYIGQVLVLP 171
>gi|393226963|gb|EJD34667.1| hypothetical protein AURDEDRAFT_117602 [Auricularia delicata
TFB-10046 SS5]
Length = 226
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
T ++ RGD+L G++ +YGVS+ A++ ANGL + D+I+ L+IP
Sbjct: 80 THQVARGDSLAGVALRYGVSVSALRRANGLWASDSIHLRAALVIP 124
>gi|345302081|ref|YP_004823983.1| Lytic transglycosylase catalytic [Rhodothermus marinus
SG0.5JP17-172]
gi|345111314|gb|AEN72146.1| Lytic transglycosylase catalytic [Rhodothermus marinus
SG0.5JP17-172]
Length = 733
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 58 TTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGV 117
T QP + S+ P ++ S TE PE + + RGD L +++KYGV
Sbjct: 544 TAQPTALETSSAERNEPSRE----TTSATTESRTPEAPTRVVYTVRRGDALSEIAQKYGV 599
Query: 118 SIDAIKEANGLSGDTIYAGKKLII 141
S+ IK N LSG+TI G++L++
Sbjct: 600 SVADIKRWNNLSGNTIRVGQELVL 623
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 50/115 (43%), Gaps = 24/115 (20%)
Query: 37 FSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPAS 96
+G ++ L+ALNP E Q PP + P + + + E +
Sbjct: 401 LAGTDVATLRALNP---------------ELRQNTLPPSRGPYFIRLPLGSYARFAEAYA 445
Query: 97 ---------CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T + RGD L ++R++GVS+ A+ ANGL I G++LI+P
Sbjct: 446 RLPEDRKRPVTTYTVRRGDALSIIARRFGVSVSALMRANGLHSTVIRPGQRLIVP 500
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
SEP + RGDTL +++++GVS+ AIK N L +TI G++L I
Sbjct: 626 SEPVTPERVVYTVRRGDTLSEIAQRFGVSVTAIKRWNNLDDNTIQIGQRLTI 677
>gi|350266289|ref|YP_004877596.1| endopeptidase LytF [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349599176|gb|AEP86964.1| endopeptidase LytF [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 411
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P +T+++ GD+LW LSR+Y +I A+K N L +Y G+ L IP
Sbjct: 23 PVEAKTIKVKSGDSLWKLSRQYDTTISALKSENKLKSTVLYVGQSLKIP 71
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T + GD+LW ++ + GV++ +I++ N LS D + G+ L I
Sbjct: 226 TYRVKAGDSLWKIANQLGVTVQSIRDKNNLSSDVLQIGQVLTIS 269
>gi|168057639|ref|XP_001780821.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667756|gb|EDQ54378.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 210
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
RT +I +GDTL+ +S+ YGVSI+AI+ ANG+ + I+ G + +P
Sbjct: 156 RTYQIKKGDTLYSISKHYGVSIEAIQAANGIDDPNFIHEGDHICLP 201
>gi|254481048|ref|ZP_05094294.1| N-acetylmuramoyl-L-alanine amidase domain protein [marine gamma
proteobacterium HTCC2148]
gi|214038843|gb|EEB79504.1| N-acetylmuramoyl-L-alanine amidase domain protein [marine gamma
proteobacterium HTCC2148]
Length = 435
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I RGDTL G+++++ VS+ +K NG+SG TI G+KL IP
Sbjct: 393 IARGDTLSGIAQRFNVSLSTLKSTNGISGSTIRIGQKLTIP 433
>gi|41582283|gb|AAS07897.1| N-acetylmuramoyl-L-alanine amidase [uncultured marine bacterium
463]
Length = 435
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I RGDTL G+++++ VS+ +K NG+SG TI G+KL IP
Sbjct: 393 IARGDTLSGIAQRFNVSLSTLKSTNGISGSTIRIGQKLTIP 433
>gi|354596040|ref|ZP_09014057.1| cell wall hydrolase/autolysin [Brenneria sp. EniD312]
gi|353673975|gb|EHD20008.1| cell wall hydrolase/autolysin [Brenneria sp. EniD312]
Length = 562
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 14/87 (16%)
Query: 68 TQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVE------------IVRGDTLWGLSRKY 115
T P+Q P+Q +P++ E S S + RG+TL ++ +Y
Sbjct: 413 THPLQAAPKQE--GRPALAAENSAASTGSSNAAAGKSSGGSSIRHTVARGETLSAIAARY 470
Query: 116 GVSIDAIKEANGLSGDTIYAGKKLIIP 142
GVS+ AI+ N L+ D ++ G++L IP
Sbjct: 471 GVSMAAIRSINKLNKDIVWVGQRLNIP 497
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 14/104 (13%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G++++ ++++N LNK+ I Q + P T T ++ + A+
Sbjct: 471 GVSMAAIRSINKLNKD---------IVWVGQRLNIP-----ATASKAATAVADTKKAAPV 516
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++VRGD+L ++ +YGVS+ I+ AN + + G+ LIIP
Sbjct: 517 RHKVVRGDSLSAIAARYGVSMKEIQRANDMKSGNVQLGQTLIIP 560
>gi|319652747|ref|ZP_08006856.1| hypothetical protein HMPREF1013_03470 [Bacillus sp. 2_A_57_CT2]
gi|317395563|gb|EFV76292.1| hypothetical protein HMPREF1013_03470 [Bacillus sp. 2_A_57_CT2]
Length = 293
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL-IIP 142
++ RGDTLW L+ K+ ++ IKEANGLS D + AG+KL I+P
Sbjct: 37 KVARGDTLWKLAGKFDSAVPIIKEANGLSADGLNAGQKLKIVP 79
>gi|328951636|ref|YP_004368971.1| NLP/P60 protein [Marinithermus hydrothermalis DSM 14884]
gi|328451960|gb|AEB12861.1| NLP/P60 protein [Marinithermus hydrothermalis DSM 14884]
Length = 239
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
G+TLW +SR YG ++ A+K NGL+ D I G++L+IP
Sbjct: 73 GETLWRISRAYGTTVAALKALNGLTSDAITPGQRLLIP 110
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+C + A+ T + +TLW ++R++ +S++A+ +AN L+ TI G+ L+IP
Sbjct: 8 LCVWLAGIAGAAGSTHTVQPSETLWRIARQHNLSVEALMQANRLTSPTIEVGQVLLIP 65
>gi|319899188|ref|YP_004159281.1| LysM/M23 peptidase domain-containing protein [Bartonella
clarridgeiae 73]
gi|319403152|emb|CBI76710.1| LysM/M23 peptidase domain protein [Bartonella clarridgeiae 73]
Length = 383
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 94 PASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P R IV+ GDTL ++++ GVS+DA++ NG++ ++IY G+ LIIP
Sbjct: 116 PVFKRNSYIVQSGDTLLSIAQQLGVSVDALRLVNGINANSIYIGQSLIIP 165
>gi|374987550|ref|YP_004963045.1| NLP/P60 family secreted protein [Streptomyces bingchenggensis
BCW-1]
gi|297158202|gb|ADI07914.1| NLP/P60 family secreted protein [Streptomyces bingchenggensis
BCW-1]
Length = 321
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 71 IQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG 130
++ PP +P +P+ + P+PA+ +TV + GDTL+GL+ K+ ++ A++ N L
Sbjct: 78 VEAPPAKP---RPTPAKVRPGPKPAAVKTVVLRYGDTLYGLAEKHHSTVKALQRLNKLGT 134
Query: 131 DT-IYAGKKLIIP 142
T IYAG L +P
Sbjct: 135 STLIYAGDTLRLP 147
>gi|344202666|ref|YP_004787809.1| lytic transglycosylase [Muricauda ruestringensis DSM 13258]
gi|343954588|gb|AEM70387.1| Lytic transglycosylase catalytic [Muricauda ruestringensis DSM
13258]
Length = 533
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTE--KSEPEPAS 96
G+ +S +K N L N Q I P++P + K + KS S
Sbjct: 431 GVGVSQIKRWNGLRSNNLRVGQRLTIY---------PRKPYIAKNDSKSNNPKSSGTVVS 481
Query: 97 CRTVEIVR-GDTLWGLSRKY-GVSIDAIKEANGLSGDTIYAGKKL 139
+ VR GD+LW +S+KY GVSI+ ++E NG+SG+ + G KL
Sbjct: 482 GSKIHTVRSGDSLWTISKKYPGVSIENLREWNGISGNNLKPGTKL 526
>gi|187918484|ref|YP_001884047.1| autolysin [Borrelia hermsii DAH]
gi|119861332|gb|AAX17127.1| autolysin [Borrelia hermsii DAH]
Length = 693
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E+V+GDTL+ +S KY +SI +K AN L ++I G+ L+IP
Sbjct: 50 EVVKGDTLYSISLKYKISIKELKNANNLKSESIRIGRILVIP 91
Score = 41.6 bits (96), Expect = 0.10, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 46 KALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKP-SICTEKSEPEPASCRTVEIVR 104
K L LN ++ + I + ++ I+ + P+ +K + EK E V +
Sbjct: 241 KHLVHLNGDKAINLKADSILDVSKIIE---ENPLSSKSLQLKAEKGSSETFISHRVSV-- 295
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
G+TL+ ++RKYGV ++A+K N LSG+ I+ ++L I
Sbjct: 296 GETLYSIARKYGVLLEALKSWNNLSGNNIFHNQELKI 332
>gi|383807025|ref|ZP_09962586.1| hypothetical protein IMCC13023_05480 [Candidatus Aquiluna sp.
IMCC13023]
gi|383299455|gb|EIC92069.1| hypothetical protein IMCC13023_05480 [Candidatus Aquiluna sp.
IMCC13023]
Length = 1028
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 16/107 (14%)
Query: 39 GIAISILKALNPL-NKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEP-EPAS 96
GI+ S L++ N + N NR Q I ST P + EP EP
Sbjct: 934 GISSSALQSFNSISNPNRISIGQLLKIPTSTDNTNVP-------------QAREPDEPEV 980
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
+T +V GDT+WG+SRK GVS A+ + NG++ + I G+ L +P
Sbjct: 981 QKTYTVVSGDTIWGISRKLGVSSSALAKLNGINNSNYIRIGQVLKVP 1027
>gi|440749536|ref|ZP_20928782.1| hypothetical protein C943_1346 [Mariniradius saccharolyticus AK6]
gi|436481822|gb|ELP37968.1| hypothetical protein C943_1346 [Mariniradius saccharolyticus AK6]
Length = 391
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 59 TQPQPIAESTQPIQ-----PPPQQPIVTKPSICTE--KSEPEPASCRTVEIVRGDTLWGL 111
TQP+P +QP++ P PQ + KP+ T+ + P T + +G+TL+ +
Sbjct: 175 TQPKP----SQPLENRPSTPAPQNQNIEKPAAPTQVATNAQLPGDWITHTVAQGETLFSI 230
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S+KY S+D I+ NGL ++I G+KL
Sbjct: 231 SQKYNSSVDDIRSWNGLGSNSISVGQKL 258
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ +G+T++ +S+KY V++ I N LSG I G+KL I
Sbjct: 117 VAQGETMFSISKKYNVAVGDIISWNKLSGSDIAVGQKLEI 156
>gi|138894828|ref|YP_001125281.1| phosphatase-associated protein [Geobacillus thermodenitrificans
NG80-2]
gi|196247546|ref|ZP_03146248.1| NLP/P60 protein [Geobacillus sp. G11MC16]
gi|134266341|gb|ABO66536.1| Phosphatase-associated protein [Geobacillus thermodenitrificans
NG80-2]
gi|196212330|gb|EDY07087.1| NLP/P60 protein [Geobacillus sp. G11MC16]
Length = 347
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 104 RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+GDTLWG+S+KY ++D +K+ N LS D I+ G+ L
Sbjct: 30 KGDTLWGISKKYNTTVDRLKQQNNLSSDLIFPGQVL 65
>gi|146295827|ref|YP_001179598.1| peptidoglycan-binding LysM [Caldicellulosiruptor saccharolyticus
DSM 8903]
gi|145409403|gb|ABP66407.1| Peptidoglycan-binding LysM [Caldicellulosiruptor saccharolyticus
DSM 8903]
Length = 507
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW LS+ + SI+AIK N L+ DT+Y G+KLI+
Sbjct: 162 GDSLWILSQTFRTSIEAIKSFNNLTNDTLYVGQKLIV 198
>gi|225849173|ref|YP_002729337.1| peptidoglycan-binding LysM:lytic transglycosylase, catalytic
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644622|gb|ACN99672.1| peptidoglycan-binding LysM:Lytic transglycosylase, catalytic
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 434
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 65/119 (54%), Gaps = 12/119 (10%)
Query: 35 VVFSGIAISILKALNPLNKNRNETTQPQP--IAESTQPIQPP-----PQQPIVTKPSICT 87
V F GI I++ K ++ + +R T P P A + +P + P P+Q + I +
Sbjct: 317 VAFEGININLPK-IDTASFDRRFITSPPPKMYANNRKPRESPKTIPEPKQENIVVSLIES 375
Query: 88 EKSEPE--PASCRTVE-IVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+K +PE AS + + IV+ GDTL+ ++++YG ++ IK N L +TI G +L +P
Sbjct: 376 DKDKPEIIKASYKVKKYIVKPGDTLYSIAKRYGTDVETIKRLNNLEDNTISVGMELTVP 434
>gi|168034158|ref|XP_001769580.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679122|gb|EDQ65573.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 325
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R +++ +GDTLWGL ++GV + I+ N L T+YAG++L +P
Sbjct: 7 RVLKVAQGDTLWGLGERHGVPWEHIQVFNKLRDHTVYAGEELKLP 51
>gi|323341518|ref|ZP_08081758.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus ruminis ATCC
25644]
gi|417974541|ref|ZP_12615355.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase [Lactobacillus
ruminis ATCC 25644]
gi|323091056|gb|EFZ33688.1| N-acetylmuramoyl-L-alanine amidase [Lactobacillus ruminis ATCC
25644]
gi|346329087|gb|EGX97392.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase [Lactobacillus
ruminis ATCC 25644]
Length = 799
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 34/45 (75%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
A+ T V GD+LWG+++K+G+++D +K+ANGL+ + +Y G+ L
Sbjct: 338 ATNGTYTAVAGDSLWGIAQKFGMTLDELKKANGLTSNNLYVGQTL 382
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 39/136 (28%), Positives = 61/136 (44%), Gaps = 22/136 (16%)
Query: 15 AENDGSGDGREAAVAKTAGFVVFSG-----------IAISILKALNPLNKNRNETTQPQP 63
+E GS + A+ ++ + V SG +++ LK+LN L N Q
Sbjct: 606 SETSGSKNQNAASNGSSSTYTVKSGDSVWNISHEHGMSMDELKSLNGLKDNLIIPGQVLK 665
Query: 64 IAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIK 123
I ++ TK I T E A V + GD+LW ++ K G+++ +K
Sbjct: 666 IKGTSSN----------TKQKIKTSSKETAEAGATYV-VKAGDSLWAVANKQGLTVAELK 714
Query: 124 EANGLSGDTIYAGKKL 139
NGLS DTIY G++L
Sbjct: 715 RINGLSSDTIYVGQRL 730
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 47/103 (45%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G+ + LK N L N Q + +S Q ++ + S
Sbjct: 359 GMTLDELKKANGLTSNNLYVGQTLKVRKSVQQNTNNETNQNQNSNVNNNDRPQQTVTSAE 418
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LWG++ K+G S++ +K N LS + I+ G+KL+I
Sbjct: 419 TYTVKSGDSLWGIATKHGCSVNDLKSWNHLSSNLIHVGQKLVI 461
Score = 43.5 bits (101), Expect = 0.031, Method: Composition-based stats.
Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 33 GFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEP 92
G G +++ LK+ N L+ N Q I + +Q QQ K EP
Sbjct: 430 GIATKHGCSVNDLKSWNHLSSNLIHVGQKLVIGQKKSTVQ---QQ---------QGKKEP 477
Query: 93 E-PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ S T + GD+LW ++ + +S+ +K N LS D I+ G+KL++
Sbjct: 478 QQTTSNETYTVKSGDSLWKIATNHNMSVSQLKNLNKLSSDMIFVGQKLVV 527
Score = 42.7 bits (99), Expect = 0.051, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 18/104 (17%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPI----QPPPQQPIVTKPSICTEKSEPEPA 95
+++S LK LN L+ + Q ++E Q Q P Q VTKPS T KS
Sbjct: 503 MSVSQLKNLNKLSSDMIFVGQKLVVSEKKQSAPSQNQNKPSQNHVTKPSTYTVKS----- 557
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD++W +S ++G+S++ + NG+ + I+ G+ L
Sbjct: 558 ---------GDSVWKISHEHGMSMNELVSLNGIKNNLIFPGQVL 592
Score = 37.0 bits (84), Expect = 2.9, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S T + GD++W +S ++G+S+D +K NGL + I G+ L I
Sbjct: 620 GSSSTYTVKSGDSVWNISHEHGMSMDELKSLNGLKDNLIIPGQVLKI 666
>gi|381397127|ref|ZP_09922540.1| Peptidoglycan-binding lysin domain-containing protein
[Microbacterium laevaniformans OR221]
gi|380775444|gb|EIC08735.1| Peptidoglycan-binding lysin domain-containing protein
[Microbacterium laevaniformans OR221]
Length = 340
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT-IYAGKKLIIP 142
E+ GDTLW ++ +GVS+DA+ +ANGL D IY G+ L IP
Sbjct: 139 EVSAGDTLWAIADAHGVSLDALLQANGLGRDAIIYPGQTLTIP 181
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT-IYAGKKLIIP 142
AS T + GDTLW +S++ G+ + A++ ANGL T I+ G+ L++P
Sbjct: 64 ASPATYTVHSGDTLWDISQRVGIELSALRAANGLEASTLIHPGQVLVLP 112
>gi|387928996|ref|ZP_10131673.1| YocH [Bacillus methanolicus PB1]
gi|387585814|gb|EIJ78138.1| YocH [Bacillus methanolicus PB1]
Length = 274
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 95 ASCRTVEIV--RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
A+ + EIV +GDTLW +S+KY V+++ +K+ NGLS D IY KL
Sbjct: 20 ANAQAEEIVVKKGDTLWEISQKYDVTVEDLKKWNGLSSDVIYPNDKL 66
Score = 35.0 bits (79), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLW +++ GV++ +K N L+ D I G L+I
Sbjct: 79 GDTLWNIAKTNGVTVQDLKTWNNLNSDLIKPGLNLVI 115
>gi|325569407|ref|ZP_08145563.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus ATCC
12755]
gi|420262667|ref|ZP_14765308.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus sp. C1]
gi|325157407|gb|EGC69568.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus ATCC
12755]
gi|394770424|gb|EJF50228.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus sp. C1]
Length = 618
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+S++Y V+++ + + N LSG I G++L++
Sbjct: 580 GDTLWGISQRYSVTVNQLMQWNNLSGSLILVGQRLVV 616
>gi|321311584|ref|YP_004203871.1| peptidoglycan hydrolase [Bacillus subtilis BSn5]
gi|320017858|gb|ADV92844.1| peptidoglycan hydrolase (cell wall-binding d,l-endopeptidase)
[Bacillus subtilis BSn5]
Length = 414
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P +T+++ GD+LW LSR+Y +I A+K N L +Y G+ L +P
Sbjct: 23 PVEAKTIKVKSGDSLWKLSRQYDTTISALKSENKLKSTVLYVGQSLKVP 71
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GD+LW ++ + GV++ +I++ N LS D + G+ L I
Sbjct: 226 TYKVKAGDSLWKIANRLGVTVQSIRDKNNLSSDVLQIGQVLTI 268
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW +++ + +S+ +K N LS D I G+KL I
Sbjct: 89 TYTVAYGDSLWMIAKNHKMSVSELKSLNSLSSDLIRPGQKLKI 131
>gi|138894539|ref|YP_001124992.1| spore cortex-lytic enzyme-like protein [Geobacillus
thermodenitrificans NG80-2]
gi|134266052|gb|ABO66247.1| spore cortex-lytic enzyme-like protein [Geobacillus
thermodenitrificans NG80-2]
Length = 231
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 91 EPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ A TV+ RGDTLW ++++YGV + +K+ N GD +Y G+KL+IP
Sbjct: 57 HADAAKVHTVK--RGDTLWNIAKQYGVPLKQLKQTN-RKGDLLYPGEKLVIP 105
>gi|89096158|ref|ZP_01169051.1| LytE [Bacillus sp. NRRL B-14911]
gi|89089012|gb|EAR68120.1| LytE [Bacillus sp. NRRL B-14911]
Length = 258
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I +GDTL+ ++R+YG ++ +K N L GD IYAG +L +P
Sbjct: 33 IKKGDTLYSIARQYGSTVGQLKHLNKLKGDLIYAGSRLEVP 73
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+ + +GDTLW L +KYG+S+ +K+ NGL D I G+ L
Sbjct: 76 ITVKKGDTLWRLGQKYGLSVAELKKINGLRSDLILIGQNL 115
>gi|407780369|ref|ZP_11127611.1| peptidase M23 [Nitratireductor pacificus pht-3B]
gi|407297822|gb|EKF16972.1| peptidase M23 [Nitratireductor pacificus pht-3B]
Length = 502
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 43/89 (48%), Gaps = 16/89 (17%)
Query: 70 PIQPPPQQ---------PIVTKPSICTEKSEPEPASCRT-------VEIVRGDTLWGLSR 113
P QP PQ+ P KP +++E A+ + GDTL+G++R
Sbjct: 221 PSQPAPQREPQERLAVLPETPKPRARPDRAEANNATASNSNGAGGVYTVASGDTLYGIAR 280
Query: 114 KYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
K G S +IK ANGLS + G+KL IP
Sbjct: 281 KTGASAASIKTANGLSDGYLQIGQKLTIP 309
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 69 QPIQPPPQQP---IVTKPSICTEK--SEPEPA----SCRTVEIVR-GDTLWGLSRKYGVS 118
QPI P QQP + +P + T S +PA + TV VR GDT + LSR++GV
Sbjct: 104 QPIAAPVQQPAPVVAARPELDTTATGSVAQPARTGDAGSTVVTVREGDTAYSLSRRFGVP 163
Query: 119 IDAIKEANGLSGDT-IYAGKKLIIP 142
I ANGL D + G++L+IP
Sbjct: 164 AGVILSANGLPRDAGLQIGQQLVIP 188
>gi|365156859|ref|ZP_09353150.1| hypothetical protein HMPREF1015_02051, partial [Bacillus smithii
7_3_47FAA]
gi|363626659|gb|EHL77640.1| hypothetical protein HMPREF1015_02051, partial [Bacillus smithii
7_3_47FAA]
Length = 188
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+C + A+ T + +GDTLW ++ Y ++D IK+ N L+ + I G KLII
Sbjct: 14 VCFSFAHSSNAASTTYTVKKGDTLWKIANAYKTTVDNIKKWNHLTSNNITVGTKLII 70
>gi|154520208|gb|ABS82775.1| putative lytic murein transglycosylase [uncultured Methylophaga
sp.]
Length = 472
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 76 QQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYA 135
QQ I+ +P+ K + + R GD+LW +SRK+ V++D +KE NGLS T+
Sbjct: 400 QQLIIWQPTQTVSKLKAINYTIRN-----GDSLWTISRKFNVTVDKVKEWNGLSDRTLLQ 454
Query: 136 -GKKLII 141
G+KL +
Sbjct: 455 PGQKLTL 461
>gi|347525885|ref|YP_004832633.1| Autolysin [Lactobacillus ruminis ATCC 27782]
gi|345284844|gb|AEN78697.1| Autolysin [Lactobacillus ruminis ATCC 27782]
Length = 725
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPI----QPPPQQPIVTKPSICTEKSEPEPA 95
+++S LK LN L+ + Q ++E Q Q P Q VTKPS T KS
Sbjct: 501 MSVSQLKNLNKLSNDMIFVGQKLVVSEKKQSAPSQNQNKPSQNQVTKPSTYTVKS----- 555
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S ++G+S+D +K NGL + I G+ L I
Sbjct: 556 ---------GDSVWKISHEHGMSMDELKSLNGLKDNLIIPGQVLKI 592
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 33/45 (73%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
A+ T V GD+LWG++ K+G+++D +K+ANGL+ + +Y G+ L
Sbjct: 336 ATNGTYTAVAGDSLWGIAHKFGMTLDELKKANGLTSNNLYVGQTL 380
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 11/101 (10%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G+++ LK+LN L N Q I ++ TK I T E A
Sbjct: 567 GMSMDELKSLNGLKDNLIIPGQVLKIKGTSSD----------TKQKIKTSSKETAEAGAT 616
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
V + GD+LW ++ K G+++ +K NGLS DTIY G++L
Sbjct: 617 YV-VKSGDSLWAVANKQGLTVAELKRINGLSSDTIYVGQRL 656
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G+ + LK N L N Q + +S Q ++ + S
Sbjct: 357 GMTLDELKKANGLTSNNLYVGQTLKVRKSAQQNTNNETNQNQNSNGNNNDRPQQTVTSAE 416
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LWG++ K+G +++ +K N LS + I+ G+KL+I
Sbjct: 417 TYTVKSGDSLWGIATKHGCNVNDLKSWNHLSSNLIHVGQKLVI 459
Score = 41.6 bits (96), Expect = 0.11, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 33 GFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEP 92
G G ++ LK+ N L+ N Q I + +Q QQ K EP
Sbjct: 428 GIATKHGCNVNDLKSWNHLSSNLIHVGQKLVIGQKKSTVQ---QQ---------QGKKEP 475
Query: 93 EPASC-RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ + T + GD+LW ++ + +S+ +K N LS D I+ G+KL++
Sbjct: 476 QQTTGNETYTVKSGDSLWKIATNHNMSVSQLKNLNKLSNDMIFVGQKLVV 525
>gi|289579097|ref|YP_003477724.1| peptidoglycan-binding protein [Thermoanaerobacter italicus Ab9]
gi|289528810|gb|ADD03162.1| Peptidoglycan-binding domain 1 protein [Thermoanaerobacter italicus
Ab9]
Length = 336
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 79 IVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAG 136
+V +PS+ + +P C T V+ GDTLW +++K+GVS+D + +AN L + IYAG
Sbjct: 105 VVPQPSLFPQPPLQKP--CPTYYTVQPGDTLWIIAQKFGVSLDELIKANYLLNPNMIYAG 162
Query: 137 KKLIIP 142
+ LIIP
Sbjct: 163 QTLIIP 168
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 94 PASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGD--TIYAGKKLIIP 142
P V IV+ GDTLW +++ + +++AI +AN D IY G+++IIP
Sbjct: 251 PTLSGKVYIVKPGDTLWNIAKTFNTTVEAILKANPDIKDPNLIYPGQRIIIP 302
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
GDTL+ +++K+ S+DAI N + IY G++LIIP
Sbjct: 13 GDTLFSIAKKFNTSVDAIITRNNIINPSLIYPGQRLIIP 51
>gi|420265747|ref|ZP_14768274.1| autolysin, partial [Lactobacillus mali KCTC 3596 = DSM 20444]
gi|394427211|gb|EJE99940.1| autolysin, partial [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 191
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LW ++ KYGVS+ +K N LS DTIY G+ L
Sbjct: 14 GDSLWAIANKYGVSVANLKSWNNLSSDTIYVGQSL 48
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 27/35 (77%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LW ++ KYG++++ +KE N L+ +TIY G+ L
Sbjct: 88 GDSLWAIATKYGLTVNKLKELNSLNTNTIYIGQSL 122
Score = 43.1 bits (100), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 18/122 (14%)
Query: 20 SGDGREAAVAKTAGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPI 79
SGD A K G+ ++ LK LN LN N Q I+
Sbjct: 87 SGDSLWAIATK-------YGLTVNKLKELNSLNTNTIYIGQSLKISNKATTTSSTTNSS- 138
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S TV+ GD+LW L+ KY ++ IK AN LS D IY G+ L
Sbjct: 139 --------SSSASSAKKSYTVK--SGDSLWQLAVKYNTTVTQIKSANHLSSDIIYVGQIL 188
Query: 140 II 141
I
Sbjct: 189 TI 190
>gi|149370366|ref|ZP_01890055.1| hypothetical protein SCB49_12920 [unidentified eubacterium SCB49]
gi|149355917|gb|EDM44474.1| hypothetical protein SCB49_12920 [unidentified eubacterium SCB49]
Length = 197
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 10/100 (10%)
Query: 41 AISILKALNP-LNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+I+ LKALNP ++ + Q ++E T+ Q + K S+ + E + T
Sbjct: 104 SIAELKALNPDISLDTLSVDQEIRVSEVTE-------QVVANKDSV--NEVEAVASKSST 154
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
E+ +GDTL+ +SRK+G+S+ + N L+ +T+ G+ L
Sbjct: 155 YEVQKGDTLYSISRKFGISVSDLTRLNSLTSNTLSIGQTL 194
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 58 TTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIV-RGDTLWGLSRKYG 116
T +P+ ST + I+ KP+I T ++ E S + I+ +G+TL+ +S+KY
Sbjct: 48 TNKPKNFVSSTSVVDQ-----IINKPTITTAPTKSEVVSAASTHIISKGETLYSISKKYN 102
Query: 117 VSIDAIKEAN-GLSGDTI 133
SI +K N +S DT+
Sbjct: 103 TSIAELKALNPDISLDTL 120
>gi|419761087|ref|ZP_14287347.1| LysM domain/M23/M37 peptidase domain protein [Thermosipho africanus
H17ap60334]
gi|407513768|gb|EKF48649.1| LysM domain/M23/M37 peptidase domain protein [Thermosipho africanus
H17ap60334]
Length = 273
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P+P E+ +GDTL+ +S ++ ++DAIK+AN L + IY G+KL IP
Sbjct: 68 PQPNGI-IYEVKQGDTLYDISLRFFTTVDAIKKANNLLSNFIYVGQKLFIP 117
>gi|423719904|ref|ZP_17694086.1| cell wall-associated hydrolase, NLP/P60 family [Geobacillus
thermoglucosidans TNO-09.020]
gi|383367150|gb|EID44434.1| cell wall-associated hydrolase, NLP/P60 family [Geobacillus
thermoglucosidans TNO-09.020]
Length = 275
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS TV+ +GDTLWG+S+KY +++ +K+ N L+ D I+ G+ L
Sbjct: 23 ASSYTVQ--KGDTLWGISKKYNTTVETLKQMNHLTSDLIFPGQIL 65
>gi|312110910|ref|YP_003989226.1| NLP/P60 protein [Geobacillus sp. Y4.1MC1]
gi|336235342|ref|YP_004587958.1| NLP/P60 protein [Geobacillus thermoglucosidasius C56-YS93]
gi|311216011|gb|ADP74615.1| NLP/P60 protein [Geobacillus sp. Y4.1MC1]
gi|335362197|gb|AEH47877.1| NLP/P60 protein [Geobacillus thermoglucosidasius C56-YS93]
Length = 275
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS TV+ +GDTLWG+S+KY +++ +K+ N L+ D I+ G+ L
Sbjct: 23 ASSYTVQ--KGDTLWGISKKYNTTVETLKQMNHLTSDLIFPGQIL 65
>gi|134098343|ref|YP_001104004.1| hypothetical protein SACE_1761 [Saccharopolyspora erythraea NRRL
2338]
gi|291006955|ref|ZP_06564928.1| hypothetical protein SeryN2_20738 [Saccharopolyspora erythraea NRRL
2338]
gi|133910966|emb|CAM01079.1| hypothetical protein SACE_1761 [Saccharopolyspora erythraea NRRL
2338]
Length = 90
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 91 EPEPASCRTVEIVRGDTLWGLSRKYG------VSIDAIKEANGLSGDTIYAGKKLIIP 142
EP PA V++ GDTLWGL+ ++ + +D I + NGL+G T G+ L++P
Sbjct: 29 EPVPAGTAVVQVRTGDTLWGLAERFAPASDPRLVVDRIAQMNGLNGVTAEVGRPLVVP 86
>gi|403384912|ref|ZP_10926969.1| NLP/P60 protein [Kurthia sp. JC30]
Length = 355
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S +T + GDTL G+ KYG+S++ +K+ N L+ D IY G+KL +
Sbjct: 26 SAKTYTVKSGDTLSGIGLKYGLSLEKLKKMNQLTSDHIYVGQKLTV 71
>gi|84496172|ref|ZP_00995026.1| hypothetical protein JNB_01595 [Janibacter sp. HTCC2649]
gi|84382940|gb|EAP98821.1| hypothetical protein JNB_01595 [Janibacter sp. HTCC2649]
Length = 375
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL G++ K+G ++ ++ +ANGL G IY G++L+IP
Sbjct: 170 GDTLLGVAAKFGRTVSSVVKANGLRGTVIYTGQRLVIP 207
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 83 PSICTEKSEPEPASCRTVEI---VRGDTLWGLSRKYGVSIDAIKEANGLS-GDTIYAGKK 138
P T ++ P + RT I G+TL+G++ +Y ++ AI +ANG+S IY G++
Sbjct: 77 PGRATSTAKAAPRTTRTSAIHTVTAGETLYGIAARYRTTMPAIAKANGISPKSFIYPGQQ 136
Query: 139 L 139
L
Sbjct: 137 L 137
>gi|403746333|ref|ZP_10954866.1| Peptidoglycan-binding lysin domain-containing protein
[Alicyclobacillus hesperidum URH17-3-68]
gi|403120664|gb|EJY55018.1| Peptidoglycan-binding lysin domain-containing protein
[Alicyclobacillus hesperidum URH17-3-68]
Length = 372
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 78 PIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
P + +P S P + +V+ GD+LW +SR++GVSI AI N L GD I G
Sbjct: 172 PRIQRPKSSKANSSPTKSWHPMTYVVQPGDSLWKISREFGVSIRAIINDNALLGDDIQPG 231
Query: 137 KKLII 141
++L+I
Sbjct: 232 QRLVI 236
>gi|448819582|ref|YP_007412744.1| Extracellular protein, gamma-D-glutamate-meso-diaminopimelate
muropeptidase (Putative) [Lactobacillus plantarum ZJ316]
gi|448273079|gb|AGE37598.1| Extracellular protein, gamma-D-glutamate-meso-diaminopimelate
muropeptidase (Putative) [Lactobacillus plantarum ZJ316]
Length = 356
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
A+ ++ I GDT+W ++KY VS+D I EANGLS + I AGK + IP
Sbjct: 31 ANADSMTIKAGDTVWAYAQKYNVSVDKIAEANGLSNPNMIIAGKTINIP 79
>gi|196247856|ref|ZP_03146558.1| cell wall hydrolase SleB [Geobacillus sp. G11MC16]
gi|196212640|gb|EDY07397.1| cell wall hydrolase SleB [Geobacillus sp. G11MC16]
Length = 195
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 91 EPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ A TV+ RGDTLW ++++YGV + +K+ N GD +Y G+KL+IP
Sbjct: 21 HADAAKVHTVK--RGDTLWNIAKQYGVPLKQLKQTN-RKGDLLYPGEKLVIP 69
>gi|395780083|ref|ZP_10460550.1| hypothetical protein MCW_00637 [Bartonella washoensis 085-0475]
gi|395419350|gb|EJF85650.1| hypothetical protein MCW_00637 [Bartonella washoensis 085-0475]
Length = 390
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 30/38 (78%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL ++R+ GVS++A+K ANG+S +IY G+ L+IP
Sbjct: 136 GDTLLSIARQIGVSVEALKLANGISTHSIYIGQVLMIP 173
>gi|344995628|ref|YP_004797971.1| hypothetical protein Calla_0326 [Caldicellulosiruptor lactoaceticus
6A]
gi|343963847|gb|AEM72994.1| LOW QUALITY PROTEIN: hypothetical protein Calla_0326
[Caldicellulosiruptor lactoaceticus 6A]
Length = 507
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW LS+ +G SI+ IK N L+ D +Y G+KLI+
Sbjct: 162 GDSLWILSQTFGTSIEVIKSLNNLTSDMLYVGQKLIV 198
>gi|325570294|ref|ZP_08146160.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus ATCC
12755]
gi|325156777|gb|EGC68951.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus casseliflavus ATCC
12755]
Length = 289
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 32/45 (71%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ ++ GDTLW ++ ++G ++DA+ +NGLS + I G++LI+
Sbjct: 245 AQSYQVASGDTLWDIANRFGTTVDALMASNGLSNEIIVIGQELIV 289
>gi|315640884|ref|ZP_07895981.1| family 4 N-acetylmuramoyl-L-alanine amidase [Enterococcus italicus
DSM 15952]
gi|315483362|gb|EFU73861.1| family 4 N-acetylmuramoyl-L-alanine amidase [Enterococcus italicus
DSM 15952]
Length = 279
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ +GDTLWG+++K+GVS+D + N +SG+ I G++L I
Sbjct: 240 VAQGDTLWGIAQKFGVSVDQLVAQNNISGELIVVGQQLSI 279
>gi|150020096|ref|YP_001305450.1| peptidase M23B [Thermosipho melanesiensis BI429]
gi|149792617|gb|ABR30065.1| peptidase M23B [Thermosipho melanesiensis BI429]
Length = 271
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 29/123 (23%)
Query: 34 FVVFSGIAISILKALNPLNKNRNETTQP-QPIAESTQPIQPPPQQPIVTKPSICTEKSEP 92
F++FS ++ S LN QP + E ++ + PSI + +E
Sbjct: 8 FLLFSALSFSSYFVLN-------YYVQPGDTVYELSKKFR--------VSPSIILDWNEV 52
Query: 93 EPASCRTVEIVR-------------GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+P + E+++ GD+L+ ++ ++ ++D IK+AN L + IY G+KL
Sbjct: 53 DPYGLKIGEVIKIPQPPGIMYEVQQGDSLYSIALRFFTTVDRIKDANELKSNYIYVGQKL 112
Query: 140 IIP 142
IP
Sbjct: 113 FIP 115
>gi|160880674|ref|YP_001559642.1| peptidoglycan-binding LysM [Clostridium phytofermentans ISDg]
gi|160429340|gb|ABX42903.1| Peptidoglycan-binding LysM [Clostridium phytofermentans ISDg]
Length = 116
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 8/55 (14%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGV--------SIDAIKEANGLSGDTIYAGKKLIIP 142
+ ++VEI GDTLW ++ KY I+ IKE+N L DTI++G LIIP
Sbjct: 58 TFQSVEIKAGDTLWSIATKYYTEEYKSIQNYIEVIKESNSLKSDTIHSGCYLIIP 112
>gi|374294982|ref|YP_005045173.1| putative glycosyl hydrolase [Clostridium clariflavum DSM 19732]
gi|359824476|gb|AEV67249.1| putative glycosyl hydrolase [Clostridium clariflavum DSM 19732]
Length = 503
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 31/37 (83%)
Query: 106 DTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
D+L+ +S+++GVSI+ IK+AN LSGD I+ G++L IP
Sbjct: 9 DSLYLISQRFGVSIEQIKQANQLSGDIIFIGQRLYIP 45
>gi|302339349|ref|YP_003804555.1| lytic transglycosylase [Spirochaeta smaragdinae DSM 11293]
gi|301636534|gb|ADK81961.1| Lytic transglycosylase catalytic [Spirochaeta smaragdinae DSM
11293]
Length = 460
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 17/125 (13%)
Query: 21 GDGREAAVAKTAGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQ--P 78
GDG + A +A F GI IS + A NP P+ + ++ I P ++ P
Sbjct: 347 GDG-DTLYAISAHF----GIPISAIIASNP-------GIVPERLRIGSRLIVPVIRETGP 394
Query: 79 IVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGK 137
+ S+ +E+ + TV+ +G+TLW ++++YG + +AI + NG+ DTIY G
Sbjct: 395 YKSSRSMVSEEELADFTGVHTVD--QGETLWAIAKRYGTTPEAIAQKNGIVMTDTIYPGH 452
Query: 138 KLIIP 142
+L++P
Sbjct: 453 RLLVP 457
>gi|83590885|ref|YP_430894.1| peptidoglycan-binding LysM [Moorella thermoacetica ATCC 39073]
gi|83573799|gb|ABC20351.1| Peptidoglycan-binding LysM [Moorella thermoacetica ATCC 39073]
Length = 333
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P A ++ GDTLW +++++G SI +K N LS D IY G+ L IP
Sbjct: 23 PMAAWALNYQVQPGDTLWYIAQRFGTSITDLKAGNNLSSDVIYPGQNLTIP 73
>gi|89097545|ref|ZP_01170434.1| YocH [Bacillus sp. NRRL B-14911]
gi|89087841|gb|EAR66953.1| YocH [Bacillus sp. NRRL B-14911]
Length = 281
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ + +GDTLWGLS+KY V+++ IK+ N LS D I A L I
Sbjct: 27 ISVEKGDTLWGLSQKYEVTVNDIKQWNDLSSDMIRAETTLSI 68
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTLW +SR +GVS+ + N LS D IY + L+I
Sbjct: 76 IKSGDTLWAISRNHGVSVSDLMHWNNLSSDLIYPEQALVI 115
>gi|373463525|ref|ZP_09555128.1| LysM domain protein [Lactobacillus kisonensis F0435]
gi|371764386|gb|EHO52798.1| LysM domain protein [Lactobacillus kisonensis F0435]
Length = 195
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 2/50 (4%)
Query: 95 ASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLS-GDTIYAGKKLIIP 142
AS T+ V+ GDT+WG+S++Y S++AI+ AN LS + I G++L IP
Sbjct: 20 ASASTIVTVKSGDTVWGISQQYNTSVNAIENANNLSNANVITVGQQLTIP 69
>gi|317151948|ref|YP_004119996.1| Lytic transglycosylase catalytic [Desulfovibrio aespoeensis Aspo-2]
gi|316942199|gb|ADU61250.1| Lytic transglycosylase catalytic [Desulfovibrio aespoeensis Aspo-2]
Length = 537
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
AS R +VR GDTLW +SRK+G ++ ++++NGL ++ G+KL IP
Sbjct: 421 ASRRGNYVVRSGDTLWSISRKFGTTVSTLQKSNGLRSKSLKVGQKLYIP 469
Score = 36.6 bits (83), Expect = 3.9, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
Query: 87 TEKSEPEPASCRTVEIVR-----GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++ E + +T ++VR GD L ++RK+GV++ +++ N LS + I+AG++L
Sbjct: 476 TRQAAKEAETTKT-QLVRYKVRNGDNLTAIARKFGVTVTELRKWNSLSSNNIFAGQQL 532
>gi|420263222|ref|ZP_14765860.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus sp. C1]
gi|394769510|gb|EJF49355.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus sp. C1]
Length = 289
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 32/45 (71%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ ++ GDTLW ++ ++G ++DA+ +NGLS + I G++LI+
Sbjct: 245 AQSYQVASGDTLWDIANRFGTTVDALMASNGLSSEIIVIGQELIV 289
>gi|366163253|ref|ZP_09463008.1| peptidoglycan-binding LysM [Acetivibrio cellulolyticus CD2]
Length = 503
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 31/38 (81%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD+L+ +S+K+GVS++ IK+AN LS + IY G++L IP
Sbjct: 8 GDSLYLISQKFGVSVEQIKQANQLSSNLIYIGQRLNIP 45
Score = 35.8 bits (81), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 27/38 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD+L+ ++++Y ++++I+ N L+G + G+KL IP
Sbjct: 59 GDSLYTIAKRYNTTVESIQSLNNLTGIELSVGQKLTIP 96
>gi|451941788|ref|YP_007462425.1| putative virulence determinant [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
gi|451901175|gb|AGF75637.1| putative virulence determinant [Bartonella vinsonii subsp.
berkhoffii str. Winnie]
Length = 391
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 84 SICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ + + P R IV+ GDTL ++R+ GV+++ +K ANG+S ++IY G+ L+IP
Sbjct: 115 TLSRSQMDNSPLFRRNSYIVQSGDTLLSIARQIGVNVEVLKSANGISNNSIYIGQVLMIP 174
>gi|78044775|ref|YP_359529.1| cell-wall associated endopeptidase [Carboxydothermus
hydrogenoformans Z-2901]
gi|77996890|gb|ABB15789.1| putative cell-wall associated endopeptidase [Carboxydothermus
hydrogenoformans Z-2901]
Length = 274
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
A T+ + GD LW L+R+Y +++AIK+AN L + + G+KL+IP
Sbjct: 23 AWATTITVKSGDNLWLLARRYNTTVEAIKKANNLKSEALKPGQKLVIP 70
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 48 LNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GD 106
L L + N T + A + + P Q +V P T + +S +V IV+ GD
Sbjct: 36 LWLLARRYNTTVEAIKKANNLKSEALKPGQKLVI-PGKSTATAVSRSSSGSSVYIVKAGD 94
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
TLW +++K+ +++D +K N L + + G+KL++
Sbjct: 95 TLWDIAKKFNLTVDELKRLNNLKSEKLSIGQKLLV 129
>gi|385264051|ref|ZP_10042138.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase [Bacillus
sp. 5B6]
gi|385148547|gb|EIF12484.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase [Bacillus
sp. 5B6]
Length = 484
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T +I PA +T+++ GD+LW L++ Y S+DAI AN L I G+ L
Sbjct: 9 LTASAIVGSALAVTPAEAQTIKVKSGDSLWKLAQNYNTSVDAITSANHLKSTVISIGQTL 68
Query: 140 IIP 142
IP
Sbjct: 69 NIP 71
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 95 ASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+ ++V V+ GD+LW ++ + +S+ +K+ NGL+ D I AG+KL
Sbjct: 88 GTTKSVYTVKSGDSLWLIASDFKMSVQELKKLNGLTSDLIRAGQKL 133
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ T + GD+LW +++K+ V+ I+E N L D + G+KL I
Sbjct: 296 DTGKTTTYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTDVLQIGQKLTI 344
>gi|384163409|ref|YP_005544788.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase [Bacillus
amyloliquefaciens LL3]
gi|328910964|gb|AEB62560.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase [Bacillus
amyloliquefaciens LL3]
Length = 483
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA +T+++ GD+LW L++ Y S+DAI AN L + G+ L IP
Sbjct: 23 PAEAQTIKVKSGDSLWKLAQTYNTSVDAITSANHLKSSVLSIGQTLTIP 71
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW +++K+ V+ I+E N L D ++ G+KL I
Sbjct: 301 TYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTDVLHIGQKLTI 343
Score = 36.6 bits (83), Expect = 4.0, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LW ++ + +S+ +K+ NGL+ D I AG+KL
Sbjct: 99 GDSLWLIASDFKMSVQELKKLNGLTSDLIRAGQKL 133
>gi|422875129|ref|ZP_16921614.1| lysM domain-containing protein [Clostridium perfringens F262]
gi|380303927|gb|EIA16221.1| lysM domain-containing protein [Clostridium perfringens F262]
Length = 537
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
AS I +GDTLW L++KY +ID + + N + D+IYAG K++IP
Sbjct: 467 ASITIYTIQKGDTLWNLAKKYKTTIDTLVKLNDIEDPDSIYAGDKIMIP 515
>gi|365926845|ref|ZP_09449608.1| autolysin, partial [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 80
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW ++ KYGVS+ +K N LS DTIY G+ L I
Sbjct: 35 GDSLWAIANKYGVSVANLKSWNNLSSDTIYVGQSLKI 71
>gi|308181977|ref|YP_003926105.1| extracellular protein, gamma-D-glutamate-meso-diaminopimelate
muropeptidase () [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|308047468|gb|ADO00012.1| extracellular protein, gamma-D-glutamate-meso-diaminopimelate
muropeptidase (putative) [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 355
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
A+ ++ I GDT+W ++KY VS+D I EANGLS + I AGK + IP
Sbjct: 26 ANADSMTIKAGDTVWAYAQKYHVSVDKIAEANGLSNPNLIIAGKTINIP 74
>gi|452974879|gb|EME74699.1| peptidoglycan hydrolase YocH [Bacillus sonorensis L12]
Length = 256
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + + + +GDTLWG+S+ G+++ +K+ N LS D I+ G+KL I
Sbjct: 23 ASAKEITVEKGDTLWGISQDNGLNLKDLKKWNQLSSDIIFPGQKLNI 69
Score = 41.6 bits (96), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S+ E + + I GDTL +++KYGVS++ +K N L D I+AGK + I
Sbjct: 71 SQEENSDQKQYTIKPGDTLSKIAQKYGVSVNDLKGWNNLKSDLIFAGKTMAI 122
>gi|257866931|ref|ZP_05646584.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus casseliflavus
EC30]
gi|257873264|ref|ZP_05652917.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus casseliflavus
EC10]
gi|257800987|gb|EEV29917.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus casseliflavus
EC30]
gi|257807428|gb|EEV36250.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus casseliflavus
EC10]
Length = 565
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
GI++ L++LN + + Q + S Q IV + + T S
Sbjct: 272 GISMDQLRSLNNIKNDFVYPGQTLKVNGSAQSTSATSTVSIVNRNASAT-------TSGN 324
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T +V GD++W ++ K+G+S+D + N + D +Y G+K+++
Sbjct: 325 TYTVVSGDSVWSIANKHGISMDQFRSLNNIKNDFVYPGQKVVV 367
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++W ++ K+G+S+D + N + D IY G+K+++
Sbjct: 459 AAGNTYTVASGDSVWSVANKHGISMDQFRSWNNIKNDFIYPGQKVVV 505
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 27/43 (62%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD++W + K+G+S+D + N + D +Y G+K+++
Sbjct: 394 TYTVAAGDSVWSIGNKHGISMDQFRSLNNIKNDYVYPGQKVVV 436
Score = 38.9 bits (89), Expect = 0.70, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 27/42 (64%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T + GD++W ++ K+G+S+D ++ N + D +Y G+ L
Sbjct: 254 QTYTVTSGDSVWSIANKHGISMDQLRSLNNIKNDFVYPGQTL 295
Score = 35.0 bits (79), Expect = 9.5, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 26/41 (63%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++ GD++WG++ K+G++ D + N + + IY G+ +
Sbjct: 522 TYKVASGDSVWGIADKFGITTDQFIQWNNIQNNFIYPGQTV 562
>gi|429504434|ref|YP_007185618.1| LytF [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
gi|429486024|gb|AFZ89948.1| LytF [Bacillus amyloliquefaciens subsp. plantarum AS43.3]
Length = 484
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T +I PA +T+++ GD+LW L++ Y S+DAI AN L I G+ L
Sbjct: 9 LTASAIVGSALAVTPAEAQTIKVKSGDSLWKLAQNYNTSVDAITSANHLKSTVISIGQTL 68
Query: 140 IIP 142
IP
Sbjct: 69 NIP 71
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 90 SEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S + ++V V+ GD+LW ++ + +S+ +K+ NGL+ D I AG+KL
Sbjct: 83 SSKNSGTTKSVYTVKSGDSLWLIASDFKMSVQELKKLNGLTSDLIRAGQKL 133
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ T + GD+LW +++K+ V+ I+E N L D + G+KL I
Sbjct: 296 DTGKTTTYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTDVLQIGQKLTI 344
>gi|373859246|ref|ZP_09601977.1| cell wall hydrolase SleB [Bacillus sp. 1NLA3E]
gi|372451110|gb|EHP24590.1| cell wall hydrolase SleB [Bacillus sp. 1NLA3E]
Length = 199
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 84 SICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
S+ T + E AS V+ GD+ W ++ KYGV + IK+ N + D IY G+ L+IP
Sbjct: 18 SLFTINHQSEAASSYQVQ--SGDSYWKIATKYGVPVANIKKTNNKTSDLIYPGQSLVIP 74
>gi|307718698|ref|YP_003874230.1| LysM domain/M23/M37 peptidase domain-containing protein
[Spirochaeta thermophila DSM 6192]
gi|306532423|gb|ADN01957.1| LysM domain/M23/M37 peptidase domain protein [Spirochaeta
thermophila DSM 6192]
Length = 260
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 31/42 (73%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E+ +GDTL+ LSR++ V ++A+KE NGL+ + I AG L +P
Sbjct: 72 EVQKGDTLYSLSRRWNVPLEALKEVNGLTSNVIKAGDFLYLP 113
>gi|154685397|ref|YP_001420558.1| LytF [Bacillus amyloliquefaciens FZB42]
gi|154351248|gb|ABS73327.1| LytF [Bacillus amyloliquefaciens FZB42]
Length = 484
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T +I PA +T+++ GD+LW L++ Y S+DAI AN L I G+ L
Sbjct: 9 LTASAIVGSALAVTPAEAQTIKVKSGDSLWKLAQNYNTSVDAITSANHLKSTVISIGQTL 68
Query: 140 IIP 142
IP
Sbjct: 69 NIP 71
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 90 SEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S + ++V V+ GD+LW ++ + +S+ +K+ NGL+ D I AG+KL
Sbjct: 83 SSKNSGTTKSVYTVKSGDSLWLIASDFKMSVQELKKLNGLTSDLIRAGQKL 133
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ T + GD+LW +++K+ V+ I+E N L D + G+KL I
Sbjct: 296 DTGKTTTYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTDVLQIGQKLTI 344
>gi|8886048|gb|AAF80360.1|AF157831_2 43 kDa antigen [Bartonella bacilliformis]
Length = 401
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 31/38 (81%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL+ ++++ G+S++++K ANG+ + IY G+KL+IP
Sbjct: 148 GDTLFSIAQQKGISVESLKVANGMGDNAIYIGQKLVIP 185
>gi|121602484|ref|YP_988836.1| LysM/M23 peptidase [Bartonella bacilliformis KC583]
gi|421760641|ref|ZP_16197456.1| LysM/M23 peptidase [Bartonella bacilliformis INS]
gi|120614661|gb|ABM45262.1| LysM/M23 peptidase domain protein [Bartonella bacilliformis KC583]
gi|411174730|gb|EKS44760.1| LysM/M23 peptidase [Bartonella bacilliformis INS]
Length = 397
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 31/38 (81%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL+ ++++ G+S++++K ANG+ + IY G+KL+IP
Sbjct: 144 GDTLFSIAQQKGISVESLKVANGMGDNAIYIGQKLVIP 181
>gi|147678486|ref|YP_001212701.1| cell wall hydrolyses involved in spore germination [Pelotomaculum
thermopropionicum SI]
gi|146274583|dbj|BAF60332.1| cell wall hydrolyses involved in spore germination [Pelotomaculum
thermopropionicum SI]
Length = 253
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD+LW +SR YG +++A++ N L+G IY G++L IP
Sbjct: 79 GDSLWLISRAYGTTVEAVQWLNRLNGTYIYVGQRLYIP 116
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ A TV + GD++W L + YGV D + +ANG I+AG++L +P
Sbjct: 23 QSAHAATVTVQPGDSVWKLGQAYGVPADVVLDANG-GNALIFAGQELDVP 71
>gi|443473080|ref|ZP_21063105.1| Membrane-bound lytic murein transglycosylase D precursor
[Pseudomonas pseudoalcaligenes KF707]
gi|442903643|gb|ELS28934.1| Membrane-bound lytic murein transglycosylase D precursor
[Pseudomonas pseudoalcaligenes KF707]
Length = 526
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 31/102 (30%), Positives = 50/102 (49%), Gaps = 12/102 (11%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQP--PPQQPIVTKPSICTEKSEPEPASC 97
+ + LK +N L+ N Q I P++P P+QP+ + + PA
Sbjct: 363 VTVKTLKEINGLSSNHLRVGQQLSI-----PMEPGMKPEQPLFQNVARASA-----PAVT 412
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
R ++ GD+LW L+R+Y V + IK N L G+ + AG+ L
Sbjct: 413 RNHKVRSGDSLWTLARQYKVDVKDIKRWNNLKGNHLRAGQVL 454
Score = 39.7 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 48 LNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDT 107
LNP K R PQ + T + + KP E + + GD+
Sbjct: 302 LNPAFKKRITLDGPQHLLVPTDKAEQFTANLALMKPR--------ELVDWQQYRVRNGDS 353
Query: 108 LWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
L G++ +Y V++ +KE NGLS + + G++L IP
Sbjct: 354 LHGIANRYHVTVKTLKEINGLSSNHLRVGQQLSIP 388
>gi|395789971|ref|ZP_10469479.1| hypothetical protein ME9_01196 [Bartonella taylorii 8TBB]
gi|395428193|gb|EJF94275.1| hypothetical protein ME9_01196 [Bartonella taylorii 8TBB]
Length = 392
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 84 SICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ + + P R IV+ GDTL ++R+ GVS++A+K ANG+ ++IY G+ L++P
Sbjct: 115 TLSRSQMDNSPIFRRNSYIVQSGDTLLSIARQIGVSVEALKLANGIKSNSIYIGQLLMVP 174
>gi|89095658|ref|ZP_01168552.1| YojL [Bacillus sp. NRRL B-14911]
gi|89089404|gb|EAR68511.1| YojL [Bacillus sp. NRRL B-14911]
Length = 226
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 13/102 (12%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+++S LK N L+ N Q I E+ + +PP +++ S T
Sbjct: 75 VSVSELKTANKLHANLIFPGQELKIPEADRTAEPP-----------ASDRKTRADVSVYT 123
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
V+ GDTLW LS+++ I+ IK NGL+ + + G++LII
Sbjct: 124 VQA--GDTLWELSQRFQTPIETIKRLNGLNSNFLLIGQRLII 163
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ +GD+L+ ++R Y VS+ +K AN L + I+ G++L IP
Sbjct: 60 VKKGDSLYKIARTYDVSVSELKTANKLHANLIFPGQELKIP 100
>gi|163854934|ref|YP_001629232.1| membrane-bound lytic murein transglycosylase D [Bordetella petrii
DSM 12804]
gi|163258662|emb|CAP40961.1| membrane-bound lytic murein transglycosylase D [Bordetella petrii]
Length = 461
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RT ++ GDTL+GL+++YG S+D ++ N L G+ + G +L +P
Sbjct: 409 NVRTHKVRAGDTLFGLAKRYGTSVDTLRALNNLKGNNLKIGSQLRLP 455
>gi|126662118|ref|ZP_01733117.1| hypothetical protein FBBAL38_02165 [Flavobacteria bacterium BAL38]
gi|126625497|gb|EAZ96186.1| hypothetical protein FBBAL38_02165 [Flavobacteria bacterium BAL38]
Length = 473
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 3/63 (4%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
V+ SI E+ P+ T ++ G+ L G++ KY VS+ A+K+ANGL D I GK L
Sbjct: 188 VSNKSIVIERKVPKKI---THKVKSGEVLGGIANKYNVSLKALKKANGLKSDMIRDGKVL 244
Query: 140 IIP 142
IP
Sbjct: 245 TIP 247
>gi|384158476|ref|YP_005540549.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase [Bacillus
amyloliquefaciens TA208]
gi|384167525|ref|YP_005548903.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase [Bacillus
amyloliquefaciens XH7]
gi|328552564|gb|AEB23056.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase [Bacillus
amyloliquefaciens TA208]
gi|341826804|gb|AEK88055.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase (major
autolysin) [Bacillus amyloliquefaciens XH7]
Length = 483
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA +T+++ GD+LW L++ Y S+DAI AN L + G+ L IP
Sbjct: 23 PAEAQTIKVKSGDSLWKLAQTYNTSVDAITSANHLKSSVLSIGQTLTIP 71
Score = 36.2 bits (82), Expect = 4.0, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW +++K+ V+ I+E N L D + G+KL I
Sbjct: 301 TYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTDVLQIGQKLTI 343
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LW ++ + +S+ +K+ NGL+ D I AG+KL
Sbjct: 99 GDSLWLIASDFKMSVQELKKLNGLTSDLIRAGQKL 133
>gi|134299272|ref|YP_001112768.1| peptidoglycan-binding LysM [Desulfotomaculum reducens MI-1]
gi|134051972|gb|ABO49943.1| Peptidoglycan-binding LysM [Desulfotomaculum reducens MI-1]
Length = 323
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 19/123 (15%)
Query: 38 SGIAISILKALNPLNKNRNETTQ-------PQPIAESTQPIQPPPQQP-------IVTKP 83
+ I+I LKA+N L+ + Q P+ ST QP PQ + T
Sbjct: 42 NNISIDKLKAINGLSNDLLSVGQVLRIDGTPETKQASTAKQQPMPQTTKTNQTGWLPTNT 101
Query: 84 SICTEKSEPEP-ASCR---TVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKK 138
S+ +++ +P AS R T+ V+ GDTL +++K G+S++ ++ N L GD IYAG+
Sbjct: 102 SLESQEKQPNTVASYRPNNTLYTVKPGDTLGAIAQKNGISLEDLRGLNNLKGDLIYAGQT 161
Query: 139 LII 141
L++
Sbjct: 162 LVL 164
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW +S+K +SID +K NGLS D + G+ L I
Sbjct: 32 GDSLWKISQKNNISIDKLKAINGLSNDLLSVGQVLRI 68
>gi|395764699|ref|ZP_10445323.1| hypothetical protein MCO_00199 [Bartonella sp. DB5-6]
gi|395414236|gb|EJF80685.1| hypothetical protein MCO_00199 [Bartonella sp. DB5-6]
Length = 392
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 84 SICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ + + P R IV+ GDTL ++R+ G+S++A+K ANG+ +IY G+ L+IP
Sbjct: 115 TLSRSQMDNSPILRRNTYIVQSGDTLLSIARQIGISVEALKLANGIKSSSIYIGQLLMIP 174
>gi|325263148|ref|ZP_08129883.1| putative LysM domain protein [Clostridium sp. D5]
gi|324031541|gb|EGB92821.1| putative LysM domain protein [Clostridium sp. D5]
Length = 519
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 72 QPPPQQPI--VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLS 129
+P P Q I V + E+ E P + + GD LW L++ Y +ID IKE N L
Sbjct: 441 KPVPMQVITDVELSPVSMEEMERRPGIVGYI-VKDGDQLWTLAKNYMTTIDGIKEINELE 499
Query: 130 GDTIYAGKKLII 141
DTI G KL+I
Sbjct: 500 SDTIKPGDKLLI 511
>gi|18311197|ref|NP_563131.1| lysM domain-containing protein [Clostridium perfringens str. 13]
gi|18145880|dbj|BAB81921.1| hypothetical protein [Clostridium perfringens str. 13]
Length = 520
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
AS I +GDTLW L++KY +ID + + N + D+IYAG K++IP
Sbjct: 467 ASITIYTIQKGDTLWNLAKKYKTTIDTLVKLNDIEDPDSIYAGDKIMIP 515
>gi|311067421|ref|YP_003972344.1| LytF protein [Bacillus atrophaeus 1942]
gi|419822594|ref|ZP_14346173.1| LytF protein [Bacillus atrophaeus C89]
gi|310867938|gb|ADP31413.1| LytF [Bacillus atrophaeus 1942]
gi|388473308|gb|EIM10052.1| LytF protein [Bacillus atrophaeus C89]
Length = 469
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA +T+++ GD+LW L++ Y +ID IK AN L + G+ L IP
Sbjct: 23 PAEAQTIKVKSGDSLWKLAQNYNTTIDKIKSANHLKSTVLSIGQTLDIP 71
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LW ++ + +S+ +K+ NGLS D I AG+KL
Sbjct: 96 GDSLWLIASDFKMSVQELKKLNGLSSDLIRAGQKL 130
Score = 37.4 bits (85), Expect = 2.3, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 99 TVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
TV V+ GD+LW +++KY V+ I++ N L D + G+KL I
Sbjct: 288 TVYTVKSGDSLWVIAQKYNVTAQQIRDKNNLKTDVLQVGQKLTI 331
>gi|308172924|ref|YP_003919629.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase [Bacillus
amyloliquefaciens DSM 7]
gi|307605788|emb|CBI42159.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase [Bacillus
amyloliquefaciens DSM 7]
Length = 483
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA +T+++ GD+LW L++ Y S+DAI AN L + G+ L IP
Sbjct: 23 PAEAQTIKVKSGDSLWKLAQTYNTSVDAITSANHLKSSVLSIGQTLTIP 71
Score = 36.2 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW +++K+ V+ I+E N L D + G+KL I
Sbjct: 301 TYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTDVLQIGQKLTI 343
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LW ++ + +S+ +K+ NGL+ D I AG+KL
Sbjct: 99 GDSLWLIASDFKMSVQELKKLNGLTSDLIRAGQKL 133
>gi|448937486|gb|AGE61023.1| cell wall hydrolase/autolysin [Bacillus phage Finn]
Length = 303
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S+P T ++ RGDTL+G+++++G+S+D +K+ N L D I G+ L
Sbjct: 199 SQPSKPKGSTYKVQRGDTLYGIAKQHGMSVDDLKKLNSLKSDIIRVGQTL 248
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
S P +T ++ RGDTL+G+++++G ++ IK+ NGL D I G
Sbjct: 251 SNPIKVVVKTYKVQRGDTLYGIAKQHGTTVANIKKLNGLKSDLINIG 297
>gi|330752649|emb|CBL87593.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase [uncultured
Flavobacteriia bacterium]
Length = 253
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 67 STQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEAN 126
+T P P ++ + + + R ++ RGDTL+ +S K+ +S+ +IK N
Sbjct: 177 ATDPKYPQKLIDLIERYELYKYDNIVLKKKNRQYKVRRGDTLYSISEKFNMSVSSIKRLN 236
Query: 127 GLSGDTIYAGKKLIIP 142
L GD + G+K+II
Sbjct: 237 NLQGDDLMIGQKIIIK 252
>gi|302390874|ref|YP_003826694.1| peptidoglycan-binding lysin domain protein [Acetohalobium
arabaticum DSM 5501]
gi|302202951|gb|ADL11629.1| Peptidoglycan-binding lysin domain protein [Acetohalobium
arabaticum DSM 5501]
Length = 534
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
Query: 4 PEDSVPTPRVPAENDGSGDGREAAVAKTAGFVVFSGIAISILKALNPLNKNRNE-TTQPQ 62
PED + P EN + G ++ +++ ++ + LN+ E TT Q
Sbjct: 388 PEDELQQPVHFVENFFNFSNFVDVSGAEEGMTAYANVSVVNVR-YSLLNQRTVELTTTLQ 446
Query: 63 PIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDA 121
A+ Q Q + I E E P+ V +V+ GDTL+ ++R+YG +IDA
Sbjct: 447 KFAKVVQFRQLEIVTDCIAVSPIVDEPCEDRPSYV--VYVVQPGDTLYKIARRYGTTIDA 504
Query: 122 IKEANGLSG-DTIYAGKKLIIP 142
I EAN + D I G+KL IP
Sbjct: 505 IVEANDIPDPDRIDVGQKLCIP 526
>gi|374335172|ref|YP_005091859.1| membrane-bound lytic murein transglycosylase D [Oceanimonas sp.
GK1]
gi|372984859|gb|AEY01109.1| membrane-bound lytic murein transglycosylase D [Oceanimonas sp.
GK1]
Length = 460
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 37 FSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPAS 96
+G++ S LK LNP K+ TT PQ + P++ + E+ + +
Sbjct: 298 LAGVSRSQLKELNPAFKH--TTTSPQIDTQILVPVRHAESFELAMADLPAAERQQYQ--- 352
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GD+L ++R+YG I A+++AN LSG+TI G+ L++
Sbjct: 353 --RYRVKGGDSLGVIARRYGTHITALRQANNLSGNTIRIGQTLLV 395
>gi|138894862|ref|YP_001125315.1| spore cortex-lytic enzyme-like protein [Geobacillus
thermodenitrificans NG80-2]
gi|134266375|gb|ABO66570.1| spore cortex-lytic enzyme-like protein [Geobacillus
thermodenitrificans NG80-2]
Length = 216
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 88 EKSEPEPASCRTV-EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ S E AS T ++ +GDTLW ++++Y ++ +K N L D ++ GKKL +P
Sbjct: 19 QASSTEAASSYTYYQVKKGDTLWKIAKQYHTTVAKLKSLNKLKSDMVHIGKKLKVP 74
>gi|365156861|ref|ZP_09353152.1| hypothetical protein HMPREF1015_02053 [Bacillus smithii 7_3_47FAA]
gi|363626661|gb|EHL77642.1| hypothetical protein HMPREF1015_02053 [Bacillus smithii 7_3_47FAA]
Length = 314
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
AS + ++ RGDTLW ++R++ ++D +KE N LS D I+
Sbjct: 22 ASAASYKVERGDTLWKIAREHHTTVDKLKEMNHLSSDLIF 61
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 27/40 (67%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ +GDTL +++ YG+S+ +K N L+ D I+ G ++++
Sbjct: 77 VQKGDTLSKIAKAYGMSVQTLKSINQLNSDLIFPGDRIVL 116
>gi|299820922|ref|ZP_07052811.1| N-acetylmuramoyl-L-alanine amidase [Listeria grayi DSM 20601]
gi|299817943|gb|EFI85178.1| N-acetylmuramoyl-L-alanine amidase [Listeria grayi DSM 20601]
Length = 545
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+ ++ LK+ N L + Q ++++T P P P T PS T K T
Sbjct: 318 VTVANLKSWNNLKSDTIYVGQKLKVSKATSTPAPKPSAPKPTAPSTSTAK---------T 368
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+V GD L +++KY V++ +K N L DTIY G+KL
Sbjct: 369 YTVVSGDNLSKIAKKYKVTVANLKSWNSLKSDTIYVGQKL 408
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+ +T +V GD L +++KY V++ +K N L DTIY G+KL
Sbjct: 433 TAKTYTVVSGDNLSKIAKKYKVTVANLKSWNSLKSDTIYVGQKL 476
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+ +T ++V GD L ++ KY V++ +K N L DTIY G+ L
Sbjct: 233 NAKTYKVVSGDNLSKIATKYKVTVANLKAWNSLKSDTIYVGQVL 276
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 104 RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+GDTLW +++K ++D + + N L IY G+KL
Sbjct: 507 KGDTLWSIAQKNKTTVDKLTKLNKLHSSAIYIGQKL 542
>gi|431602213|ref|ZP_19522589.1| muramidase-2 [Enterococcus faecium E1861]
gi|430589981|gb|ELB28073.1| muramidase-2 [Enterococcus faecium E1861]
Length = 668
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY GKKL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGKKLTI 298
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
P QQ IV K S T + PA +T + G+++WG++ +G+++ + E N + + I
Sbjct: 600 PGQQVIVKKGSSQTTNQQA-PAGSKTYTVKSGESVWGVADSHGITMAQLIEWNNIKNNFI 658
Query: 134 YAGKKLII 141
Y G+ LI+
Sbjct: 659 YPGQTLIV 666
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 414 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 450
>gi|347733226|ref|ZP_08866291.1| lysM domain protein [Desulfovibrio sp. A2]
gi|347518253|gb|EGY25433.1| lysM domain protein [Desulfovibrio sp. A2]
Length = 600
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
A R IV+ GDTL+G++R G S++ +++ANGL+G ++ G+KL IP
Sbjct: 431 AERRATYIVKQGDTLYGIARAQGSSVETLQKANGLNGTSLQLGQKLYIP 479
>gi|169344194|ref|ZP_02865176.1| lysM domain protein [Clostridium perfringens C str. JGS1495]
gi|169297652|gb|EDS79752.1| lysM domain protein [Clostridium perfringens C str. JGS1495]
Length = 520
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
AS I +GDTLW L++KY +ID + + N + D+IYAG K++IP
Sbjct: 467 ASITIYTIQKGDTLWNLAKKYKTTIDTLVKLNDIEDPDSIYAGDKIMIP 515
>gi|110799972|ref|YP_696893.1| lysM domain-containing protein [Clostridium perfringens ATCC 13124]
gi|168210144|ref|ZP_02635769.1| lysM domain protein [Clostridium perfringens B str. ATCC 3626]
gi|168213681|ref|ZP_02639306.1| lysM domain protein [Clostridium perfringens CPE str. F4969]
gi|168215844|ref|ZP_02641469.1| lysM domain protein [Clostridium perfringens NCTC 8239]
gi|110674619|gb|ABG83606.1| lysM domain protein [Clostridium perfringens ATCC 13124]
gi|170711743|gb|EDT23925.1| lysM domain protein [Clostridium perfringens B str. ATCC 3626]
gi|170714863|gb|EDT27045.1| lysM domain protein [Clostridium perfringens CPE str. F4969]
gi|182382294|gb|EDT79773.1| lysM domain protein [Clostridium perfringens NCTC 8239]
Length = 520
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
AS I +GDTLW L++KY +ID + + N + D+IYAG K++IP
Sbjct: 467 ASITIYTIQKGDTLWNLAKKYKTTIDTLVKLNDIEDPDSIYAGDKIMIP 515
>gi|168205548|ref|ZP_02631553.1| lysM domain protein [Clostridium perfringens E str. JGS1987]
gi|422346881|ref|ZP_16427795.1| hypothetical protein HMPREF9476_01868 [Clostridium perfringens
WAL-14572]
gi|170662897|gb|EDT15580.1| lysM domain protein [Clostridium perfringens E str. JGS1987]
gi|373225714|gb|EHP48045.1| hypothetical protein HMPREF9476_01868 [Clostridium perfringens
WAL-14572]
Length = 520
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
AS I +GDTLW L++KY +ID + + N + D+IYAG K++IP
Sbjct: 467 ASITIYTIQKGDTLWNLAKKYKTTIDTLVKLNDIEDPDSIYAGDKIMIP 515
>gi|220933056|ref|YP_002509964.1| Peptidoglycan-binding LysM [Halothermothrix orenii H 168]
gi|219994366|gb|ACL70969.1| Peptidoglycan-binding LysM [Halothermothrix orenii H 168]
Length = 619
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 32/42 (76%)
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++I +GDTLW +SR++ +++ IK+ N L+ +TIY G+ L++
Sbjct: 92 IKINKGDTLWSVSRQFKTTVEEIKQFNSLTVNTIYPGQHLVL 133
Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ G+TLW LS KYGV I IK+ NGL I G+ L IP
Sbjct: 43 KVKSGETLWFLSGKYGVPIKHIKDFNGLKSTRIKQGQTLKIP 84
>gi|182626267|ref|ZP_02954024.1| lysM domain protein [Clostridium perfringens D str. JGS1721]
gi|177908446|gb|EDT70984.1| lysM domain protein [Clostridium perfringens D str. JGS1721]
Length = 520
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
AS I +GDTLW L++KY +ID + + N + D+IYAG K++IP
Sbjct: 467 ASITIYTIQKGDTLWNLAKKYKTTIDTLVKLNDIEDPDSIYAGDKIMIP 515
>gi|196248568|ref|ZP_03147269.1| cell wall hydrolase SleB [Geobacillus sp. G11MC16]
gi|196212293|gb|EDY07051.1| cell wall hydrolase SleB [Geobacillus sp. G11MC16]
Length = 216
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 88 EKSEPEPASCRTV-EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ S E AS T ++ +GDTLW ++++Y ++ +K N L D ++ GKKL +P
Sbjct: 19 QASSTEAASSYTYYQVKKGDTLWKIAKQYHTTVAKLKSLNKLKSDMVHIGKKLKVP 74
>gi|86148237|ref|ZP_01066534.1| N-acetylmuramoyl-L-alanine amidase [Vibrio sp. MED222]
gi|85834007|gb|EAQ52168.1| N-acetylmuramoyl-L-alanine amidase [Vibrio sp. MED222]
Length = 571
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R ++ RGD L ++ KYGVS+++I++AN L D + G+ LIIP
Sbjct: 524 LRKHKVARGDYLGKIASKYGVSVNSIRQANKLRSDELAIGQVLIIP 569
>gi|320119747|gb|ADW15972.1| invasion associated protein [Listeria monocytogenes]
Length = 154
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+++ G ++DAIK+AN L+ D I G+KL +
Sbjct: 5 GDTLWGIAQSKGTTVDAIKKANNLTTDKIVPGQKLQV 41
>gi|56419843|ref|YP_147161.1| peptidoglycan hydrolase [Geobacillus kaustophilus HTA426]
gi|375008285|ref|YP_004981918.1| hypothetical protein [Geobacillus thermoleovorans CCB_US3_UF5]
gi|448237464|ref|YP_007401522.1| putative endopeptidase [Geobacillus sp. GHH01]
gi|56379685|dbj|BAD75593.1| peptidoglycan hydrolase (DL-endopeptidase II family) (cell
wall-binding protein) [Geobacillus kaustophilus HTA426]
gi|359287134|gb|AEV18818.1| hypothetical protein GTCCBUS3UF5_15050 [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445206306|gb|AGE21771.1| putative endopeptidase [Geobacillus sp. GHH01]
Length = 341
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS + + +GDTLW ++R+ G ++ A+K+ NGLS D I+ G+ L
Sbjct: 19 HAASAASYTVQKGDTLWKIARQSGTTVAALKQENGLSSDLIFPGQVL 65
>gi|393762579|ref|ZP_10351206.1| lytic murein transglycosylase [Alishewanella agri BL06]
gi|392606814|gb|EIW89698.1| lytic murein transglycosylase [Alishewanella agri BL06]
Length = 527
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
I+++ L+ LN L+ N Q I + Q Q+P P+ TE
Sbjct: 368 ISVAELQRLNKLSGNTIRIGQSLLIPRAGDASQQLVQRPAAVSPATATE----------I 417
Query: 100 VEIV-RGDTLWGLSRKYGVSIDAIKEANGLSGD-TIYAGKKLII 141
V +V RGDTLW LSRK+ V++ ++ N LS ++ G+KL I
Sbjct: 418 VHLVQRGDTLWDLSRKFDVTVAQLRSWNKLSASASLREGQKLSI 461
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 25/115 (21%)
Query: 37 FSGIAISILKALNPLNKNR-------NETTQPQPIAE--STQPIQPPPQQPIVTKPSICT 87
+GI+++ L+ALNP ++ P AE S Q Q P + + +P
Sbjct: 295 LAGISVADLQALNPGFSQWATAPGGPHQLVLPLDKAEHFSAQLAQLPADKLMQWQP---- 350
Query: 88 EKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ GDTL ++++Y +S+ ++ N LSG+TI G+ L+IP
Sbjct: 351 ------------YQVKSGDTLGAIAKRYQISVAELQRLNKLSGNTIRIGQSLLIP 393
>gi|187780167|ref|ZP_02996640.1| hypothetical protein CLOSPO_03763 [Clostridium sporogenes ATCC
15579]
gi|187773792|gb|EDU37594.1| LysM domain protein [Clostridium sporogenes ATCC 15579]
Length = 504
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 29/38 (76%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD+L+ ++R YG++++ +KE NGL D +Y G+++ IP
Sbjct: 14 GDSLFKIARSYGITVEQLKEYNGLVSDELYVGQQIFIP 51
>gi|395792296|ref|ZP_10471734.1| hypothetical protein MEI_00355 [Bartonella vinsonii subsp.
arupensis Pm136co]
gi|395432810|gb|EJF98785.1| hypothetical protein MEI_00355 [Bartonella vinsonii subsp.
arupensis Pm136co]
Length = 391
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 57 ETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKY 115
+TQP+ S I P + + T + + P R IV+ GDTL ++R+
Sbjct: 91 NSTQPRGETSSDSRIMGTPPRDLGT---LSRSQMGNSPIFRRNSYIVQSGDTLLSIARQI 147
Query: 116 GVSIDAIKEANGLSGDTIYAGKKLIIP 142
GV+++A+K ANG+ ++IY G+ L+IP
Sbjct: 148 GVNVEALKSANGIRNNSIYIGQVLMIP 174
>gi|335430626|ref|ZP_08557514.1| peptidoglycan-binding LysM [Haloplasma contractile SSD-17B]
gi|334887652|gb|EGM25974.1| peptidoglycan-binding LysM [Haloplasma contractile SSD-17B]
Length = 867
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD LW +SR Y VSIDAI++AN L+ D + G+ L IP
Sbjct: 165 GDNLWSISRAYDVSIDAIRQANNLTTDQLSIGQHLDIP 202
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD LW +SR Y VSIDAI++AN L+ D + G+ L IP
Sbjct: 221 GDNLWSISRAYDVSIDAIRQANNLATDQLSIGQHLDIP 258
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 28/38 (73%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD LW ++ ++ VS+D++KEAN L+ DTI G +L IP
Sbjct: 110 GDNLWNIANEFNVSVDSLKEANNLTSDTIQIGMQLTIP 147
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 75 PQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
P Q ++ + + + T + GD LW +++++ VSID I+EAN L+ D++
Sbjct: 545 PNQALIIPLATDASQERASTVNPITYTVQSGDDLWKIAKRHAVSIDDIREANNLTTDSLD 604
Query: 135 AGKKLIIP 142
G+ L+IP
Sbjct: 605 IGQNLVIP 612
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD LW +SR Y VSIDAI++AN L+ D + G+ L IP
Sbjct: 277 GDNLWSISRAYNVSIDAIRQANNLTTDELSIGQLLDIP 314
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 27/38 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD LW +SR Y VSIDAI++AN L+ D + G+ L IP
Sbjct: 332 GDNLWSISRAYNVSIDAIRQANNLTTDELSIGQLLDIP 369
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD+LW ++ +Y V++DA+K+AN ++ DTI G L +P
Sbjct: 449 GDSLWTIANQYNVTVDALKQANNITTDTIVVGDTLTVP 486
>gi|239826709|ref|YP_002949333.1| NLP/P60 protein [Geobacillus sp. WCH70]
gi|239807002|gb|ACS24067.1| NLP/P60 protein [Geobacillus sp. WCH70]
Length = 338
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
AS TV+ +GDTLWG+S+KY +++ +K+ N L+ D I+ G+ L
Sbjct: 23 ASNYTVQ--KGDTLWGISKKYNTTVETLKQMNHLTSDFIFPGQIL 65
>gi|121535113|ref|ZP_01666930.1| peptidase M23B [Thermosinus carboxydivorans Nor1]
gi|121306363|gb|EAX47288.1| peptidase M23B [Thermosinus carboxydivorans Nor1]
Length = 300
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P+ TV V GDTLW L+ YGV ++ I+EANG D + G+K+ +P
Sbjct: 116 PQKGVLHTV--VFGDTLWRLANLYGVEVERIREANGKQNDFLAVGEKVFVP 164
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 18/124 (14%)
Query: 24 REAAVAKTAGFVVFSGIAISILKALNPL-----NKNRNETTQPQPIAESTQPIQPPPQQP 78
R+ A A FV+ + +A S+L L R QP +A +P+ P
Sbjct: 3 RQILAAMPASFVLVAVLAFSVLIGGLSLVGPAAAVERPNNAQPAGLAVPAEPLAPKAAAE 62
Query: 79 IVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEAN-GLSGDTIYAGK 137
P I RT +V G+TL ++ +YGV ++ + AN +SGDT+Y G
Sbjct: 63 KHQAPQI------------RTHTVVAGETLSDIAARYGVDVETLLAANPNISGDTVYPGD 110
Query: 138 KLII 141
+L+I
Sbjct: 111 ELVI 114
>gi|423015622|ref|ZP_17006343.1| LysM domain-containing protein 1 [Achromobacter xylosoxidans AXX-A]
gi|338781377|gb|EGP45768.1| LysM domain-containing protein 1 [Achromobacter xylosoxidans AXX-A]
Length = 472
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 33/47 (70%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RT ++ +GDTL+ L+++YG S+DA++ N L G+ + G +L +P
Sbjct: 420 NVRTHKVRQGDTLFSLAKQYGTSVDALRALNNLKGNALKIGAQLRVP 466
>gi|373858532|ref|ZP_09601268.1| polysaccharide deacetylase [Bacillus sp. 1NLA3E]
gi|372451672|gb|EHP25147.1| polysaccharide deacetylase [Bacillus sp. 1NLA3E]
Length = 410
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+V+GDTLW ++ + GV++ +K+ N LS D IY G++L I
Sbjct: 150 VVKGDTLWKIATRAGVTVTKLKQWNNLSSDVIYVGQELKI 189
>gi|329297960|ref|ZP_08255296.1| cell wall hydrolase/autolysin [Plautia stali symbiont]
Length = 551
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 66 ESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEA 125
E +P+ P + + P+ T + + + + RG+TL G++ +YGVS+ ++E
Sbjct: 419 EENRPLDRAPAVSVASNPATGTVQ---YTGATQRHTVTRGETLSGIAARYGVSMATLREL 475
Query: 126 NGLSGDTIYAGKKLIIP 142
N L D ++ G++L +P
Sbjct: 476 NNLKRDVVWVGQRLKVP 492
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 20/111 (18%)
Query: 32 AGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSE 91
+G G++++ L+ LN L ++ + Q ++ P + T S
Sbjct: 459 SGIAARYGVSMATLRELNNLKRD---------VVWVGQRLKVPAGSGVSTAAS------- 502
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PA + +VRGD+L ++ KYGVS AI +AN + + G+ L IP
Sbjct: 503 -RPARHK---VVRGDSLTAIAAKYGVSPKAIMQANNMKSSNVMLGQNLKIP 549
>gi|110639404|ref|YP_679613.1| peptidoglycan lytic transglycosylase-like protein [Cytophaga
hutchinsonii ATCC 33406]
gi|110282085|gb|ABG60271.1| peptidoglycan lytic transglycosylase-related protein, glycoside
hydrolase family 23 protein [Cytophaga hutchinsonii ATCC
33406]
Length = 583
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 57 ETTQPQPI-AESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKY 115
E Q +P+ E+ +P+ + P++T P+ E V+ G+T++GLSRKY
Sbjct: 446 EPVQKKPVEKETVKPV--VKETPVITLPAAAAEAKIKRDTVFHVVQ--SGETVFGLSRKY 501
Query: 116 GVSIDAIKEANGLSGDTIYAGKKLII 141
+ D+I+E N L+G I +KLI+
Sbjct: 502 EIDSDSIREWNHLNGYAIQLNQKLIV 527
>gi|410464282|ref|ZP_11317732.1| LysM domain-containing protein [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409982612|gb|EKO39051.1| LysM domain-containing protein [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 252
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
+ RGDTL L++KYGVS AI EANG+ D + GK L IP
Sbjct: 207 VARGDTLTRLAKKYGVSTQAIMEANGMKDADHLQLGKTLTIP 248
>gi|227326202|ref|ZP_03830226.1| N-acetylmuramoyl-L-alanine amidase [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 557
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Query: 68 TQPIQPPPQQ---PIVTKPSICTEKS-------EPEPASCRTVEIVRGDTLWGLSRKYGV 117
T P+Q P+Q P+ + S TE S + S R + RG+TL ++R+YGV
Sbjct: 410 THPMQSLPKQESRPLQSAAS-DTETSGGNVTAAKASAGSTRHT-VARGETLSSIARRYGV 467
Query: 118 SIDAIKEANGLSGDTIYAGKKLIIP 142
S+ A+++ N L+ D ++ G++L IP
Sbjct: 468 SLAAMRDVNKLNKDIVWVGQRLNIP 492
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 14/104 (13%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G++++ ++ +N LNK+ I Q + P TK + T P+ A+
Sbjct: 466 GVSLAAMRDVNKLNKD---------IVWVGQRLNIPATG---TKQTASTP--APKKAAPV 511
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++V+GD+L ++ +YGVS+ I++AN + T+ G+ L+IP
Sbjct: 512 KHKVVKGDSLSAIAARYGVSMKEIQQANNMRSGTVQLGQTLVIP 555
>gi|188535088|ref|YP_001908885.1| N-acetylmuramoyl-L-alanine amidase [Erwinia tasmaniensis Et1/99]
gi|188030130|emb|CAO98016.1| N-acetylmuramoyl-L-alanine amidase [Erwinia tasmaniensis Et1/99]
Length = 554
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 32 AGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSE 91
+G G++++ L+A+N L K+ Q + +QP+ I +
Sbjct: 460 SGIAAEYGVSMATLRAMNTLKKDVVWVGQRLKVPAGSQPV-------------IAATRER 506
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P ++VRGD+L ++ YGVS A+++AN L + G+ LIIP
Sbjct: 507 PVKH-----KVVRGDSLTQIAAHYGVSPQAVRQANKLKSQNVMLGQTLIIP 552
Score = 39.3 bits (90), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RG+TL G++ +YGVS+ ++ N L D ++ G++L +P
Sbjct: 453 VKRGETLSGIAAEYGVSMATLRAMNTLKKDVVWVGQRLKVP 493
>gi|385873611|gb|AFI92131.1| N-acetylmuramoyl-L-alanine amidase AmiB [Pectobacterium sp.
SCC3193]
Length = 553
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 10/84 (11%)
Query: 68 TQPIQPPPQQPIVTKPSICTE---------KSEPEPASCRTVEIVRGDTLWGLSRKYGVS 118
T P+Q P+Q + S ++ ++ S R + RG+TL ++R+YGVS
Sbjct: 406 THPMQSLPKQESRPRQSAASDTATSGSNVTAAKASAGSTRHT-VARGETLSSIARRYGVS 464
Query: 119 IDAIKEANGLSGDTIYAGKKLIIP 142
+ A+++ N L+ D ++ G++L +P
Sbjct: 465 LTAMRDVNKLNKDIVWVGQRLNVP 488
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 83 PSICTEKSEPEPASCRTV----EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKK 138
P+ T+++ PA T ++V+GD+L ++ +YGVS+ I++AN L ++ G+
Sbjct: 488 PTTGTKQTASTPAPKNTAPVKHKVVKGDSLSAIAARYGVSMKEIQQANNLRSGSVQLGQT 547
Query: 139 LIIP 142
LIIP
Sbjct: 548 LIIP 551
>gi|291619093|ref|YP_003521835.1| AmiB [Pantoea ananatis LMG 20103]
gi|378765476|ref|YP_005193935.1| N-acetylmuramoyl-L-alanine amidase [Pantoea ananatis LMG 5342]
gi|386017345|ref|YP_005935643.1| N-acetylmuramoyl-L-alanine amidase AmiB [Pantoea ananatis AJ13355]
gi|386077727|ref|YP_005991252.1| N-acetylmuramoyl-L-alanine amidase AmiB [Pantoea ananatis PA13]
gi|291154123|gb|ADD78707.1| AmiB [Pantoea ananatis LMG 20103]
gi|327395425|dbj|BAK12847.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Pantoea ananatis
AJ13355]
gi|354986908|gb|AER31032.1| N-acetylmuramoyl-L-alanine amidase AmiB [Pantoea ananatis PA13]
gi|365184948|emb|CCF07898.1| N-acetylmuramoyl-L-alanine amidase [Pantoea ananatis LMG 5342]
Length = 558
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 66 ESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEA 125
E +P+ P +V+ P T +++ A R + RG+TL G++ KYGVS+ +++
Sbjct: 420 EENRPLATSPAVSVVSNP--ATGETQYTGAIQRHT-VTRGETLSGIAAKYGVSMATLRQM 476
Query: 126 NGLSGDTIYAGKKLIIP 142
N L D ++ G++L +P
Sbjct: 477 NTLKRDVVWVGQRLKVP 493
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 24/116 (20%)
Query: 32 AGFVVFSGIAISILKALNPLNKNRNETTQ-----PQPIAESTQPIQPPPQQPIVTKPSIC 86
+G G++++ L+ +N L ++ Q +A T P +P+ K
Sbjct: 460 SGIAAKYGVSMATLRQMNTLKRDVVWVGQRLKVPASAVASRTAPASSGAHRPVRHK---- 515
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+VRGD+L ++ YGVS +I +AN L + G+ L IP
Sbjct: 516 ---------------VVRGDSLSSIAAHYGVSPKSILQANNLKSTNVMLGQNLKIP 556
>gi|333922756|ref|YP_004496336.1| cell wall hydrolase SleB [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333748317|gb|AEF93424.1| cell wall hydrolase SleB [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 280
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+V GD+L+ +S+K+ V+++ I+ ANG+ GD IY G+ L IP
Sbjct: 33 VVPGDSLYSISQKFHVTVNDIRSANGVKGDLIYPGQVLNIP 73
>gi|380033925|ref|YP_004890916.1| extracellular protein,gamma-D-glutamate-meso-diaminopimelate
muropeptidase [Lactobacillus plantarum WCFS1]
gi|342243168|emb|CCC80402.1| extracellular protein,gamma-D-glutamate-meso-diaminopimelate
muropeptidase [Lactobacillus plantarum WCFS1]
Length = 370
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
A+ ++ I GDT+W ++KY VS+D I EANGLS + I AGK + IP
Sbjct: 41 ANADSMTIKAGDTVWAYAQKYHVSVDKIAEANGLSNPNLIIAGKTINIP 89
>gi|357013437|ref|ZP_09078436.1| peptidoglycan-binding LysM [Paenibacillus elgii B69]
Length = 505
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 33/44 (75%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T + RGD+L+ +++K+GV++DA+ + N L+ +TIY G+ L +P
Sbjct: 3 TYVVQRGDSLYSIAQKFGVTVDALLKENRLTSNTIYVGQTLAMP 46
Score = 36.6 bits (83), Expect = 3.7, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
RT + GD+L+ +++++G + AI NGL+ + G++L IP
Sbjct: 51 RTYTVRAGDSLYSIAQRFGTTYQAIMILNGLTSTALQVGQRLHIP 95
>gi|323702005|ref|ZP_08113674.1| cell wall hydrolase SleB [Desulfotomaculum nigrificans DSM 574]
gi|323533091|gb|EGB22961.1| cell wall hydrolase SleB [Desulfotomaculum nigrificans DSM 574]
Length = 280
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 31/41 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+V GD+L+ +S+K+ V+++ I+ ANG+ GD IY G+ L IP
Sbjct: 33 VVPGDSLYSISQKFHVTVNDIRSANGVKGDLIYPGQVLNIP 73
>gi|429204432|ref|ZP_19195720.1| hypothetical protein D271_01994 [Lactobacillus saerimneri 30a]
gi|428147216|gb|EKW99444.1| hypothetical protein D271_01994 [Lactobacillus saerimneri 30a]
Length = 335
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT--IYAGKKLIIP 142
TV + GDT+W ++KYGVSI +I++ N +S D+ IY + L IP
Sbjct: 31 TVRVKSGDTVWNFAKKYGVSIQSIEKLNKVSADSHLIYVNQSLEIP 76
>gi|406671512|ref|ZP_11078751.1| hypothetical protein HMPREF9706_01011 [Facklamia hominis CCUG
36813]
gi|405580762|gb|EKB54821.1| hypothetical protein HMPREF9706_01011 [Facklamia hominis CCUG
36813]
Length = 614
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL+ ++R YG+S+D +K NGLS + I+AG +L +
Sbjct: 105 GDTLYNIARAYGLSLDQLKAMNGLSSNYIFAGDQLAV 141
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL G+++ YGVS++ +K NGL D IY G +L I
Sbjct: 173 GDTLSGIAQYYGVSVEQLKAWNGLVSDLIYPGYRLSI 209
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
AS I GD L+ L YG+S++ + NGLS IY G+ + IP
Sbjct: 236 ASGNAYTIKAGDNLYDLGLAYGLSMETLMAYNGLSSTMIYPGQVIYIP 283
>gi|254557890|ref|YP_003064307.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase [Lactobacillus
plantarum JDM1]
gi|418273421|ref|ZP_12889049.1| extracellular protein, gamma-D-glutamate-meso-diaminopimelate
muropeptidase [Lactobacillus plantarum subsp. plantarum
NC8]
gi|254046817|gb|ACT63610.1| extracellular protein, gamma-D-glutamate-meso-diaminopimelate
muropeptidase (putative) [Lactobacillus plantarum JDM1]
gi|376011035|gb|EHS84359.1| extracellular protein, gamma-D-glutamate-meso-diaminopimelate
muropeptidase [Lactobacillus plantarum subsp. plantarum
NC8]
Length = 370
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
A+ ++ I GDT+W ++KY VS+D I EANGLS + I AGK + IP
Sbjct: 41 ANADSMTIKAGDTVWAYAQKYHVSVDKIAEANGLSNPNLIIAGKTINIP 89
>gi|386288024|ref|ZP_10065190.1| N-acetylmuramoyl-L-alanine amidase [gamma proteobacterium BDW918]
gi|385279003|gb|EIF42949.1| N-acetylmuramoyl-L-alanine amidase [gamma proteobacterium BDW918]
Length = 444
Score = 46.2 bits (108), Expect = 0.005, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 34/70 (48%)
Query: 73 PPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT 132
PPP T P A R I RGDTL G++ +Y V + ++ N LSG +
Sbjct: 373 PPPDTYFAALKRGDTPGGRPATAGVREYTIARGDTLSGIALRYNVPLSDLQRHNQLSGSS 432
Query: 133 IYAGKKLIIP 142
I G+K+ IP
Sbjct: 433 IRVGQKIQIP 442
>gi|395787448|ref|ZP_10467049.1| hypothetical protein ME7_00384 [Bartonella birtlesii LL-WM9]
gi|395411872|gb|EJF78393.1| hypothetical protein ME7_00384 [Bartonella birtlesii LL-WM9]
Length = 391
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 84 SICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ + + P R IV+ GDTL ++R+ GVS++A+K ANG+ ++IY G+ L++P
Sbjct: 115 TLSHSQMDNAPIFRRNSYIVQSGDTLLSIARQIGVSVEALKLANGIGNNSIYIGQVLMVP 174
>gi|238787536|ref|ZP_04631334.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia frederiksenii
ATCC 33641]
gi|238724323|gb|EEQ15965.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia frederiksenii
ATCC 33641]
Length = 622
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 13/83 (15%)
Query: 60 QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSI 119
QP+P+ + Q + +PI T + ++ RG+TL G++ +YGVS+
Sbjct: 487 QPEPVVSTAQSGRSTAAKPIAT-------------GKTQIHKVQRGETLSGIANQYGVSM 533
Query: 120 DAIKEANGLSGDTIYAGKKLIIP 142
+++ N L D ++ G++L +P
Sbjct: 534 AVLRQNNTLKNDVVWVGQRLKVP 556
Score = 38.5 bits (88), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ RGDTL ++ +YGVS+ I+ AN + + G+ L IP
Sbjct: 579 QVKRGDTLSAIAARYGVSMSEIERANKIKSGNVQLGQTLTIP 620
>gi|395802542|ref|ZP_10481794.1| lytic transglycosylase [Flavobacterium sp. F52]
gi|395434983|gb|EJG00925.1| lytic transglycosylase [Flavobacterium sp. F52]
Length = 603
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G I+ LK LN L N + I+++ I+ P I + +K P
Sbjct: 498 GTTIAELKELNNLTSNNIGLGKTLIISKAAVVIEEPASTAIASNSVDSFKKKAPSKNVSE 557
Query: 99 TVEIVRGDTLWGLSRKY-GVSIDAIKEANGLSGDTIYAGKKLII 141
+ +GD+L+ +S+KY GV+I IK+ NG+ + I G KL I
Sbjct: 558 DYYVKKGDSLYSISKKYPGVTISDIKKWNGIKDEDIKPGMKLKI 601
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 40 IAISILKALNPLNKNRNETTQPQPI-AESTQPIQPPPQQPIVTKP-SICTEKSEPEPASC 97
++IS +K N L N + I AE P++ P +V K +I + +++ + A
Sbjct: 422 VSISDIKKWNNLKTNAVAIGRSLKIKAEEEVPVKTLP--AVVDKEQAIASAENKEKTAVD 479
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+V GD L +++K+G +I +KE N L+ + I GK LII
Sbjct: 480 MDYVVVAGDNLGSIAKKFGTTIAELKELNNLTSNNIGLGKTLII 523
>gi|319408336|emb|CBI81989.1| LysM/M23 peptidase domain protein [Bartonella schoenbuchensis R1]
Length = 388
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 94 PASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P S + IV+ GDTL ++R+ GVS++A+K ANG++ +I+ G+ LIIP
Sbjct: 121 PTSRQGSYIVQSGDTLLSIARQIGVSVEALKLANGMNNHSIHVGQVLIIP 170
>gi|319789335|ref|YP_004150968.1| Peptidase M23 [Thermovibrio ammonificans HB-1]
gi|317113837|gb|ADU96327.1| Peptidase M23 [Thermovibrio ammonificans HB-1]
Length = 350
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RGD+L +++K+ V++ +K AN L G+TIY G+KL+IP
Sbjct: 24 RVKRGDSLGKIAQKFHVTVRELKRANRLKGNTIYVGQKLVIP 65
>gi|218708320|ref|YP_002415941.1| N-acetylmuramoyl-L-alanine amidase [Vibrio splendidus LGP32]
gi|218321339|emb|CAV17289.1| N-acetylmuramoyl-L-alanine amidase [Vibrio splendidus LGP32]
Length = 571
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R ++ RGD L ++ KYGVS+++I++AN L D + G+ LIIP
Sbjct: 524 LRKHKVARGDYLGKIASKYGVSVNSIRQANRLRSDELAIGQVLIIP 569
>gi|77163868|ref|YP_342393.1| N-acetylmuramoyl-L-alanine amidase [Nitrosococcus oceani ATCC
19707]
gi|76882182|gb|ABA56863.1| N-acetylmuramoyl-L-alanine amidase [Nitrosococcus oceani ATCC
19707]
Length = 472
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I RGDTL G+++ Y VS++ ++ AN L GD I+ G L+IP
Sbjct: 432 INRGDTLSGVAQHYDVSLNQLRLANDLKGDRIHVGDILLIP 472
>gi|297566442|ref|YP_003685414.1| rare lipoprotein A [Meiothermus silvanus DSM 9946]
gi|296850891|gb|ADH63906.1| rare lipoprotein A [Meiothermus silvanus DSM 9946]
Length = 168
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+T + +GDTL+ ++ KYG S+ A+++AN LSGD I G+ L +
Sbjct: 20 QTHTVQKGDTLYSIAHKYGTSVQALQQANNLSGDVIKVGQVLTV 63
>gi|407795610|ref|ZP_11142568.1| hypothetical protein MJ3_01867 [Salimicrobium sp. MJ3]
gi|407019951|gb|EKE32665.1| hypothetical protein MJ3_01867 [Salimicrobium sp. MJ3]
Length = 274
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+S++Y VS+ +K NGL+ + IY G+ L +
Sbjct: 32 GDTLWGISKQYNVSVSQLKSVNGLNSNIIYPGQSLSV 68
>gi|257871949|ref|ZP_05651602.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Enterococcus casseliflavus EC10]
gi|257806113|gb|EEV34935.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Enterococcus casseliflavus EC10]
Length = 621
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+S++Y V+++ + + N LSG I G+ L++
Sbjct: 583 GDTLWGISQRYSVTVNQLMQWNNLSGSLILVGQSLVV 619
>gi|220931484|ref|YP_002508392.1| peptidase S8/S53 subtilisin kexin sedolisin [Halothermothrix orenii
H 168]
gi|219992794|gb|ACL69397.1| peptidase S8 and S53 subtilisin kexin sedolisin [Halothermothrix
orenii H 168]
Length = 797
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 93 EPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ S T+ VR GD+L+ LS +YGVSI IK N L+ IY G++L IP
Sbjct: 31 QSFSNYTIYTVRPGDSLYKLSNRYGVSISTIKMLNNLNSSIIYVGQRLKIP 81
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P + + ++ GDTL+ +S K+ +S+ IKE N L+ + I+ G++L+IP
Sbjct: 81 PVNMKKYKVRPGDTLYLISLKFNISVKDIKEINNLTSNLIFTGQELLIP 129
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 27/38 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD+L+ +++++G SI +K+ N + + IY G+K+ +P
Sbjct: 151 GDSLYKIAKQFGTSIQVLKDINNFNTNIIYIGQKIKVP 188
>gi|89100992|ref|ZP_01173836.1| CwlC [Bacillus sp. NRRL B-14911]
gi|89084288|gb|EAR63445.1| CwlC [Bacillus sp. NRRL B-14911]
Length = 229
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGD-TIYAGKKL 139
P+ A+ +V GDT++GLS++YG +I+ I++ N L G TIY G++L
Sbjct: 178 PKKATAVFHTVVAGDTVYGLSKRYGSTINQIRQWNNLDGSYTIYVGQRL 226
>gi|336115255|ref|YP_004570022.1| NLP/P60 protein [Bacillus coagulans 2-6]
gi|335368685|gb|AEH54636.1| NLP/P60 protein [Bacillus coagulans 2-6]
Length = 469
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T +IV+GDTL G+++K+GV++ +KE N LS D I AG L
Sbjct: 180 TYQIVKGDTLSGVAQKFGVTVSQLKEWNHLSSDWIVAGSAL 220
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ +IV GDTL +++KYGV + +KE N L+ D IYAG L I
Sbjct: 77 KKYKIVSGDTLSAIAKKYGVKVSQLKEWNHLNSDLIYAGDILKI 120
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T S+ + E A T + +GD+LW +S++Y ++ IK N L+GD IY +K
Sbjct: 13 MTLASLIVGSASTEAA---TYTVKKGDSLWKISQQYHTTVSQIKSDNHLTGDIIYPNQKF 69
Query: 140 IIP 142
+P
Sbjct: 70 KVP 72
>gi|124005173|ref|ZP_01690015.1| LysM domain protein [Microscilla marina ATCC 23134]
gi|123989425|gb|EAY28986.1| LysM domain protein [Microscilla marina ATCC 23134]
Length = 740
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Query: 93 EPASCRTVE--IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+P + R V+ + RG+TL+ +SR YGVSID +K+ NGL + + AG++L
Sbjct: 305 KPLANRQVKHRVSRGETLYSISRLYGVSIDKVKQWNGLHSNKLSAGQQL 353
Score = 42.4 bits (98), Expect = 0.062, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 72 QPPPQQPIVTKPSICTEKSEP---EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q PQ +V + T + P PA TV+ GD L+ +S+KY VS+ ++ N +
Sbjct: 388 QTHPQHRLVGN-KLTTYSAVPTNNNPAIFHTVQ--SGDNLYRISKKYNVSVTKLRTLNKM 444
Query: 129 SGDTIYAGKKLII 141
+T++AGKKL+I
Sbjct: 445 RNNTVFAGKKLLI 457
>gi|417951106|ref|ZP_12594215.1| N-acetylmuramoyl-L-alanine amidase [Vibrio splendidus ATCC 33789]
gi|342805379|gb|EGU40649.1| N-acetylmuramoyl-L-alanine amidase [Vibrio splendidus ATCC 33789]
Length = 573
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R ++ RGD L ++ KYGVS+++I++AN L D + G+ LIIP
Sbjct: 526 LRKHKVARGDYLGKIAAKYGVSVNSIRQANKLRSDELAIGQVLIIP 571
>gi|127511497|ref|YP_001092694.1| N-acetylmuramoyl-L-alanine amidase [Shewanella loihica PV-4]
gi|126636792|gb|ABO22435.1| N-acetylmuramoyl-L-alanine amidase [Shewanella loihica PV-4]
Length = 439
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 32/42 (76%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ G++L ++ +Y VS+D+IK+AN L +T+Y G+KLIIP
Sbjct: 396 KVTAGESLSVIAHRYQVSVDSIKKANKLKSNTLYIGQKLIIP 437
>gi|375266405|ref|YP_005023848.1| membrane-bound lytic murein transglycosylase D [Vibrio sp. EJY3]
gi|369841725|gb|AEX22869.1| membrane-bound lytic murein transglycosylase D [Vibrio sp. EJY3]
Length = 526
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 14/109 (12%)
Query: 37 FSGIAISILKALNP-LNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPA 95
++GI + L++ NP N+ PQ + PI K + + +E
Sbjct: 289 YAGIGVKELQSYNPAYNQWSTSPNGPQKLL-----------IPIEKKDAFLAQVAENRGK 337
Query: 96 SCRT--VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ ++ GD+L L+RKYG + I+ ANGLS D I G+ L+IP
Sbjct: 338 GVKVARYKVKSGDSLGVLARKYGTTTKVIRRANGLSNDNIRIGQHLLIP 386
>gi|366054337|ref|ZP_09452059.1| NLP/P60 protein, partial [Lactobacillus suebicus KCTC 3549]
Length = 276
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLS-GDTIYAGKKLIIP 142
+ A T +I GDT+W S+KY VSID+I +AN L+ + I AGK + IP
Sbjct: 8 QVAHADTTQIQAGDTVWSFSQKYHVSIDSIVKANKLADANMIVAGKTINIP 58
>gi|317049759|ref|YP_004117407.1| cell wall hydrolase/autolysin [Pantoea sp. At-9b]
gi|316951376|gb|ADU70851.1| cell wall hydrolase/autolysin [Pantoea sp. At-9b]
Length = 549
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
IA SI K L N Q P E +P+ P + + P+ T + + +
Sbjct: 393 IAQSIYKGLR--NYFLAHPLQSMP-KEENRPLDNAPAVSVASNPATGTVQ---YTGATQR 446
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RG+TL G++ KYGVS+ +++ N L D ++ G++L +P
Sbjct: 447 HTVTRGETLSGIAAKYGVSMATLRDMNSLKRDVVWVGQRLKVP 489
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++VRGD+L ++ YGVS +AI +AN + + G+ L IP
Sbjct: 506 KVVRGDSLTAIAAHYGVSPNAIMQANNMKSSNVMLGQTLKIP 547
>gi|257865612|ref|ZP_05645265.1| autolysin [Enterococcus casseliflavus EC30]
gi|257799546|gb|EEV28598.1| autolysin [Enterococcus casseliflavus EC30]
Length = 621
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+S++Y V+++ + + N LSG I G+ L++
Sbjct: 583 GDTLWGISQRYSVTVNQLMQWNNLSGSLILVGQSLVV 619
>gi|410458030|ref|ZP_11311795.1| cell wall hydrolase SleB [Bacillus azotoformans LMG 9581]
gi|409931965|gb|EKN68937.1| cell wall hydrolase SleB [Bacillus azotoformans LMG 9581]
Length = 198
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 79 IVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGK 137
+V S+ + + T +V+ G+T W +++KYG+S++ +K N S + +Y+G+
Sbjct: 9 VVATLSLSLFGLNSQTDAATTTHLVKSGETYWTIAQKYGLSVNYLKSINNKSSNALYSGQ 68
Query: 138 KLIIP 142
KL++P
Sbjct: 69 KLVLP 73
>gi|148981052|ref|ZP_01816272.1| N-acetylmuramoyl-L-alanine amidase [Vibrionales bacterium SWAT-3]
gi|145961028|gb|EDK26351.1| N-acetylmuramoyl-L-alanine amidase [Vibrionales bacterium SWAT-3]
Length = 573
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R ++ RGD L ++ KYGVS+++I++AN L D + G+ LIIP
Sbjct: 526 LRKHKVARGDYLGKIAAKYGVSVNSIRQANKLRSDELAIGQVLIIP 571
>gi|238784777|ref|ZP_04628779.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia bercovieri ATCC
43970]
gi|238714290|gb|EEQ06300.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia bercovieri ATCC
43970]
Length = 627
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 13/88 (14%)
Query: 55 RNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRK 114
R+ QP P+ + Q + +P+ T S + ++ RG+TL G++ +
Sbjct: 480 RSSVNQPDPVISNAQSGRVSAAKPVATGKS-------------QIHKVQRGETLSGIASQ 526
Query: 115 YGVSIDAIKEANGLSGDTIYAGKKLIIP 142
YGVS+ ++++N L D ++ G++L +P
Sbjct: 527 YGVSMALLRQSNTLKNDVVWVGQRLKVP 554
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
VT + + K++P + ++ RGDTL ++ +YGVS+ I+ AN + + G+ L
Sbjct: 563 VTPKATASAKAKPSKSQPVKHQVKRGDTLSAIAARYGVSMSEIERANKIKSGNVQLGQTL 622
Query: 140 IIP 142
IP
Sbjct: 623 TIP 625
>gi|392955963|ref|ZP_10321493.1| cell wall hydrolase SleB [Bacillus macauensis ZFHKF-1]
gi|391878205|gb|EIT86795.1| cell wall hydrolase SleB [Bacillus macauensis ZFHKF-1]
Length = 191
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%), Gaps = 2/47 (4%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS TV+ G++LW +S+KYGVSI A+K NGL+ + I G++L +
Sbjct: 23 ASAHTVQ--HGESLWKISQKYGVSIQALKAKNGLTSNLIIPGQQLKV 67
>gi|440761034|ref|ZP_20940132.1| N-acetylmuramoyl-L-alanine amidase [Pantoea agglomerans 299R]
gi|436425222|gb|ELP22961.1| N-acetylmuramoyl-L-alanine amidase [Pantoea agglomerans 299R]
Length = 556
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RG+TL G++ KYGVS+D ++ N L D ++ G++L +P
Sbjct: 453 VTRGETLSGIAAKYGVSMDTLRGMNALKRDVVWVGQRLKVP 493
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 16/111 (14%)
Query: 32 AGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSE 91
+G G+++ L+ +N L ++ + Q ++ P ++ + +
Sbjct: 460 SGIAAKYGVSMDTLRGMNALKRD---------VVWVGQRLKVPAS-------AVASRTAR 503
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P ++V GD+L G++ YGVS AI + N L + G+ L IP
Sbjct: 504 AAPRGVVRHKVVVGDSLTGIAAHYGVSPKAIMQTNNLKSTNVMLGQNLKIP 554
>gi|15606073|ref|NP_213450.1| lipoprotein [Aquifex aeolicus VF5]
gi|2983249|gb|AAC06844.1| lipoprotein [Aquifex aeolicus VF5]
Length = 349
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 104 RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
RGD+L +++K+GVS+ IK N L G+ IY G+KL IP
Sbjct: 99 RGDSLIKIAKKFGVSVKEIKRVNKLKGNRIYVGQKLKIP 137
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 6/108 (5%)
Query: 39 GIAISILKALNPLNKNRNETTQPQ--PIAESTQPIQPPPQQPIVT--KPSICTEKSEPEP 94
G+++ +K +N L NR Q P+ + + ++ + T P + E+
Sbjct: 111 GVSVKEIKRVNKLKGNRIYVGQKLKIPVYKEVKTVKKEQKVYRTTSKYPKVVKERVRKRV 170
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
V RGDTL +++++ S+ IK N L G+ I G+KL IP
Sbjct: 171 IVIYRVR--RGDTLIKIAKRFRTSVKEIKRINRLKGNLIRVGQKLKIP 216
>gi|304396958|ref|ZP_07378838.1| cell wall hydrolase/autolysin [Pantoea sp. aB]
gi|304355754|gb|EFM20121.1| cell wall hydrolase/autolysin [Pantoea sp. aB]
Length = 556
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RG+TL G++ KYGVS+D ++ N L D ++ G++L +P
Sbjct: 453 VTRGETLSGIAAKYGVSMDTLRGMNALKRDVVWVGQRLKVP 493
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 16/111 (14%)
Query: 32 AGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSE 91
+G G+++ L+ +N L ++ + Q ++ P ++ + +
Sbjct: 460 SGIAAKYGVSMDTLRGMNALKRD---------VVWVGQRLKVPAS-------AVASRTAR 503
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P ++V GD+L G++ YGVS AI + N L + G+ L IP
Sbjct: 504 AAPRGVVRHKVVVGDSLTGIAAHYGVSPKAIMQTNNLKSTNVMLGQNLKIP 554
>gi|293115468|ref|ZP_05791608.2| putative LysM domain protein [Butyrivibrio crossotus DSM 2876]
gi|292809816|gb|EFF69021.1| putative LysM domain protein [Butyrivibrio crossotus DSM 2876]
Length = 519
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GDTLW +++++ + D+I EAN L D IY G KLII
Sbjct: 474 VKEGDTLWNIAKRFYTTADSIMEANNLENDMIYPGMKLII 513
>gi|254435773|ref|ZP_05049280.1| N-acetylmuramoyl-L-alanine amidase [Nitrosococcus oceani AFC27]
gi|207088884|gb|EDZ66156.1| N-acetylmuramoyl-L-alanine amidase [Nitrosococcus oceani AFC27]
Length = 230
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I RGDTL G+++ Y VS++ ++ AN L GD I+ G L+IP
Sbjct: 190 INRGDTLSGVAQHYDVSLNQLRLANDLKGDRIHVGDILLIP 230
>gi|148232583|ref|NP_001088735.1| lysM and putative peptidoglycan-binding domain-containing protein 1
[Xenopus laevis]
gi|82179659|sp|Q5PQ30.1|LYSM1_XENLA RecName: Full=LysM and putative peptidoglycan-binding
domain-containing protein 1
gi|56269954|gb|AAH87389.1| LOC495999 protein [Xenopus laevis]
Length = 215
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 94 PASCRTVE--IVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
PA R +E + GDTL GL+ +YGVS++ IK AN L + D+I+ K L IP
Sbjct: 31 PAQIRKLEHQVQPGDTLQGLALRYGVSMEQIKRANRLYTNDSIFLKKSLYIP 82
>gi|373858548|ref|ZP_09601284.1| glycoside hydrolase family 18 [Bacillus sp. 1NLA3E]
gi|372451688|gb|EHP25163.1| glycoside hydrolase family 18 [Bacillus sp. 1NLA3E]
Length = 1138
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD+L+G++ G+S+D IK+ N LSG+TI+ GK L +P
Sbjct: 105 GDSLYGIAAANGISVDQIKQLNKLSGNTIFIGKTLQLP 142
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+V DTL G++RKY ++ IKE N LS D I G+ L+ P
Sbjct: 309 VVPSDTLTGIARKYNTTVLRIKELNNLSTDVINVGQHLVFP 349
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTLW ++ ++ VSID I E N LS I G+ L +P
Sbjct: 752 GDTLWAIANRFNVSIDKITELNQLSNTIISVGQVLNLP 789
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 94 PASCRTV-EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P + T+ ++V GD+L+G+++++ S+ AI+ N L +TI G+ L IP
Sbjct: 225 PQTVSTIYKVVSGDSLYGIAKRFNTSVSAIQTENKLLTNTINIGQILKIP 274
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+V GD+L+ ++ KY + ++IK N L+ +TI+ G+ L IP
Sbjct: 148 VVPGDSLFRIANKYYSTTESIKIKNNLTSNTIFIGQHLTIP 188
>gi|126654377|ref|ZP_01726127.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase (major
autolysin) (CWBP49') [Bacillus sp. B14905]
gi|126589177|gb|EAZ83353.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase (major
autolysin) (CWBP49') [Bacillus sp. B14905]
Length = 194
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
S E AS T + GD+LW ++ +GVS + N LS IY G+KL I
Sbjct: 15 STVESASAATYTVQSGDSLWKIANHHGVSYQTLMNLNHLSSSNIYVGQKLTIH 67
>gi|220931485|ref|YP_002508393.1| cell wall hydrolase SleB [Halothermothrix orenii H 168]
gi|219992795|gb|ACL69398.1| cell wall hydrolase SleB [Halothermothrix orenii H 168]
Length = 546
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL+ ++ K+G +++ IKE N LS + +Y G+KL+IP
Sbjct: 321 GDTLYIIAIKFGTTVELIKEVNNLSSEILYVGQKLLIP 358
Score = 43.5 bits (101), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 28/38 (73%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD+L+ ++ K+ +++ IKE N L+ D++Y G+KL IP
Sbjct: 266 GDSLYSIATKFKTTVERIKEINALASDSLYVGQKLFIP 303
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 100 VEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
V VR GD+L+ ++ K+ +I IK+ NGL+ D +Y G+KL IP
Sbjct: 146 VYYVRAGDSLYTIAGKFNTTISRIKQVNGLTSDMLYIGQKLYIP 189
Score = 42.4 bits (98), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 27/38 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD+L+ ++R++ ++ +K+ NGL + +Y G+KL IP
Sbjct: 207 GDSLYNIARRFNTTVQELKDYNGLKSNMLYVGQKLYIP 244
>gi|429765252|ref|ZP_19297552.1| LysM domain protein [Clostridium celatum DSM 1785]
gi|429186702|gb|EKY27638.1| LysM domain protein [Clostridium celatum DSM 1785]
Length = 522
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 88 EKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
E+ + AS + +GDTLW L++KY +ID + E N L S +++ G+KLIIP
Sbjct: 462 EEKVSKKASVTIYVVNKGDTLWDLAKKYSTTIDLLTEINELDSSESLTQGQKLIIP 517
>gi|394993303|ref|ZP_10386063.1| LytF [Bacillus sp. 916]
gi|393805875|gb|EJD67234.1| LytF [Bacillus sp. 916]
Length = 484
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T +I PA +T+++ GD+LW L++ Y S+DAI AN L + G+ L
Sbjct: 9 LTASAIVGSALAVTPAEAQTIKVKSGDSLWKLAQNYNTSVDAITSANHLKSTVLSIGQTL 68
Query: 140 IIP 142
IP
Sbjct: 69 NIP 71
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 90 SEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S + ++V V+ GD+LW ++ + +S+ +K+ NGL+ D I AG+KL
Sbjct: 83 SSKNSGTTKSVYTVKSGDSLWLIASDFKMSVQELKKLNGLTSDLIRAGQKL 133
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW +++K+ V+ I+E N L D + G+KL I
Sbjct: 302 TYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTDVLQIGQKLTI 344
>gi|389795689|ref|ZP_10198803.1| membrane-bound lytic murein transglycosylase D [Rhodanobacter
fulvus Jip2]
gi|388430341|gb|EIL87515.1| membrane-bound lytic murein transglycosylase D [Rhodanobacter
fulvus Jip2]
Length = 396
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 88 EKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ S+P S R + GD+LWG++R Y VS+D ++ N L G +I G L +
Sbjct: 339 DNSQPSATSPRHHTVRSGDSLWGIARHYSVSVDQLRSWNHLRGQSIKPGLVLKV 392
>gi|452854906|ref|YP_007496589.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase (major
autolysin) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
gi|452079166|emb|CCP20919.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase (major
autolysin) [Bacillus amyloliquefaciens subsp. plantarum
UCMB5036]
Length = 484
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T +I PA +T+++ GD+LW L++ Y S+DAI AN L + G+ L
Sbjct: 9 LTASAIVGSALAVTPAEAQTIKVKSGDSLWKLAQNYNTSVDAITSANHLKSTVLSIGQTL 68
Query: 140 IIP 142
IP
Sbjct: 69 NIP 71
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 90 SEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S + ++V V+ GD+LW ++ + +S+ +K+ NGL+ D I AG+KL
Sbjct: 83 SSKNSGTTKSVYTVKSGDSLWLIASDFKMSVQELKKLNGLTSDLIRAGQKL 133
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW +++K+ V+ I+E N L D + G+KL I
Sbjct: 302 TYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTDVLQIGQKLTI 344
>gi|381402964|ref|ZP_09927648.1| N-acetylmuramoyl-L-alanine amidase [Pantoea sp. Sc1]
gi|380736163|gb|EIB97226.1| N-acetylmuramoyl-L-alanine amidase [Pantoea sp. Sc1]
Length = 553
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 66 ESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEA 125
E +P+ P + + P T ++ A+ R + RG+TL G++ KYGVS+ ++E
Sbjct: 419 EENRPLGSSPAVSVASNP--ATGVTQYTGATQRHT-VTRGETLSGIAAKYGVSMATLREL 475
Query: 126 NGLSGDTIYAGKKLIIP 142
N L D ++ G++L +P
Sbjct: 476 NTLKRDVVWVGQRLKVP 492
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++V GD+L G++ YGVS AI + N L + G+ L IP
Sbjct: 510 KVVVGDSLTGIAAHYGVSPKAIMQTNNLKSTNVMLGQNLKIP 551
>gi|384264499|ref|YP_005420206.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase (major
autolysin) [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|387897443|ref|YP_006327739.1| Endopeptidase [Bacillus amyloliquefaciens Y2]
gi|380497852|emb|CCG48890.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase (major
autolysin) [Bacillus amyloliquefaciens subsp. plantarum
YAU B9601-Y2]
gi|387171553|gb|AFJ61014.1| Endopeptidase [Bacillus amyloliquefaciens Y2]
Length = 484
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T +I PA +T+++ GD+LW L++ Y S+DAI AN L + G+ L
Sbjct: 9 LTASAIVGSALAVTPAEAQTIKVKSGDSLWKLAQNYNTSVDAITSANHLKSTVLSIGQTL 68
Query: 140 IIP 142
IP
Sbjct: 69 NIP 71
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 90 SEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S + ++V V+ GD+LW ++ + +S+ +K+ NGL+ D I AG+KL
Sbjct: 83 SSKNSGTTKSVYTVKSGDSLWLIASDFKMSVQELKKLNGLTSDLIRAGQKL 133
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ T + GD+LW +++K+ V+ I+E N L D + G+KL I
Sbjct: 296 DTGKTTTYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTDVLQIGQKLTI 344
>gi|357039931|ref|ZP_09101722.1| NLP/P60 protein [Desulfotomaculum gibsoniae DSM 7213]
gi|355357294|gb|EHG05070.1| NLP/P60 protein [Desulfotomaculum gibsoniae DSM 7213]
Length = 210
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 94 PASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
PA T V+ GDTLW +SR+YGVS++ I+++N + I+ G+KL+I
Sbjct: 25 PAYADTYYTVQPGDTLWRISRQYGVSVEQIQKSNAVYTTLIFPGQKLLI 73
>gi|255077033|ref|XP_002502171.1| predicted protein [Micromonas sp. RCC299]
gi|226517436|gb|ACO63429.1| predicted protein [Micromonas sp. RCC299]
Length = 212
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 79 IVTKPSICTEKSE---PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEAN----GLSGD 131
+ T+P++ ++S AS + R D LW ++ KYGVS+D +K N G + D
Sbjct: 3 VTTRPAVLAKRSVRACGARASASVYTVQRNDNLWNIANKYGVSLDDLKRVNSTTLGGNYD 62
Query: 132 TIYAGKKLIIP 142
I+ G +L+IP
Sbjct: 63 VIFPGTQLVIP 73
>gi|20807784|ref|NP_622955.1| LysM repeat-containing protein [Thermoanaerobacter tengcongensis
MB4]
gi|20516340|gb|AAM24559.1| LysM-repeat proteins and domains [Thermoanaerobacter tengcongensis
MB4]
Length = 185
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 90 SEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGD--TIYAGKKLIIP 142
P P CR+ V+ GD++W ++ K+G+S+D + +AN D IY G+++ IP
Sbjct: 12 HHPHPEHCRSFYTVQPGDSMWSIANKFGISLDCLIKANPQIRDPNLIYPGQQICIP 67
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 97 CRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGD--TIYAGKKLIIP 142
CRT+ VR GD+LW ++ +GVS+D + +AN D IY G+++ IP
Sbjct: 78 CRTIYTVRPGDSLWSIANMFGVSLDCLIKANPQISDPNLIYPGQQICIP 126
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 92 PEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGD--TIYAGKKLIIP 142
P P +CRT+ + GD+LW ++ +GVS++A+ +AN D IY G+++ IP
Sbjct: 132 PSPQTCRTIYTAKAGDSLWSIANMFGVSLEALIKANPQIPDPNLIYPGQQICIP 185
>gi|218961054|ref|YP_001740829.1| Tetratricopeptide repeat transcriptional regulator (modular
protein) [Candidatus Cloacamonas acidaminovorans]
gi|167729711|emb|CAO80623.1| Tetratricopeptide repeat transcriptional regulator (modular
protein) [Candidatus Cloacamonas acidaminovorans str.
Evry]
Length = 402
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I +GDTL+ LS++YG ++D +K N LS + + G+KLI+
Sbjct: 33 IKKGDTLYSLSKRYGTTVDELKRLNNLSDNNLSIGQKLIV 72
>gi|421732387|ref|ZP_16171510.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS
[Bacillus amyloliquefaciens subsp. plantarum M27]
gi|451347749|ref|YP_007446380.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS
[Bacillus amyloliquefaciens IT-45]
gi|407074600|gb|EKE47590.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS
[Bacillus amyloliquefaciens subsp. plantarum M27]
gi|449851507|gb|AGF28499.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS
[Bacillus amyloliquefaciens IT-45]
Length = 484
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T +I PA +T+++ GD+LW L++ Y S+DAI AN L + G+ L
Sbjct: 9 LTASAIVGSALAVTPAEAQTIKVKSGDSLWKLAQNYNTSVDAITSANHLKSTVLSIGQTL 68
Query: 140 IIP 142
IP
Sbjct: 69 NIP 71
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 90 SEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S + ++V V+ GD+LW ++ + +S+ +K+ NGL+ D I AG+KL
Sbjct: 83 SSKNSGTTKSVYTVKSGDSLWLIASDFKMSVQELKKLNGLTSDLIRAGQKL 133
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW +++K+ V+ I+E N L D + G+KL I
Sbjct: 302 TYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTDVLQIGQKLTI 344
>gi|407976152|ref|ZP_11157053.1| peptidase M23 [Nitratireductor indicus C115]
gi|407428327|gb|EKF41010.1| peptidase M23 [Nitratireductor indicus C115]
Length = 529
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
AS +V GDTL+G++RK G + +IK AN L + G+KL+IP
Sbjct: 288 ASGGYYTVVSGDTLYGIARKTGANASSIKAANNLGDGYLQVGQKLVIP 335
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 4/63 (6%)
Query: 84 SICTEKSEPEPASCR---TVEIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKL 139
S+ + ++P + R + + G+T + LSR+YGV + I ANG+ + AG+++
Sbjct: 154 SVSRQPAQPSQDAGRRGNVITVAEGETAYNLSRRYGVPVSVILSANGMQHASELKAGQQI 213
Query: 140 IIP 142
+IP
Sbjct: 214 VIP 216
>gi|423714301|ref|ZP_17688560.1| hypothetical protein ME1_01306 [Bartonella vinsonii subsp.
arupensis OK-94-513]
gi|395420685|gb|EJF86950.1| hypothetical protein ME1_01306 [Bartonella vinsonii subsp.
arupensis OK-94-513]
Length = 391
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 57 ETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKY 115
+TQP+ S I P + + T + + P R IV+ GDTL ++R+
Sbjct: 91 NSTQPRGETSSDSRIMGTPPRDLGT---LSRSQMGNSPIFRRNSYIVQSGDTLLSIARQI 147
Query: 116 GVSIDAIKEANGLSGDTIYAGKKLIIP 142
G++++A+K ANG+ ++IY G+ L+IP
Sbjct: 148 GINVEALKSANGIRNNSIYIGQVLMIP 174
>gi|347753625|ref|YP_004861190.1| hypothetical protein Bcoa_3238 [Bacillus coagulans 36D1]
gi|347586143|gb|AEP02410.1| 3D domain-containing protein [Bacillus coagulans 36D1]
Length = 264
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+S+KY S+ +K+ N LS + IY +KL I
Sbjct: 35 GDTLWGISQKYNTSVKTLKQNNQLSTEMIYPSQKLTI 71
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 98 RTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ V +++ GDTL +S+KYGV ++ IKE N LS D I+ +++I
Sbjct: 74 KNVYVIKAGDTLSDISKKYGVPVEQIKEWNDLSSDVIFPHDQIVI 118
>gi|431795466|ref|YP_007222370.1| LysM repeat-containing protein [Echinicola vietnamensis DSM 17526]
gi|430786231|gb|AGA76360.1| LysM repeat-containing protein [Echinicola vietnamensis DSM 17526]
Length = 523
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 24/125 (19%)
Query: 39 GIAISILKALNPLNKN----------------RNETTQ-----PQPIAESTQPIQPPPQQ 77
GI + LKA N L K+ RNE + P P T +P P
Sbjct: 398 GIRLHSLKAKNRLYKDEDLREGMVLKLQKYLRRNEAFEYRQVSPSPSNRQTNTAKPSPTP 457
Query: 78 PIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT-IYAG 136
T P I +K P+ T ++ +G+TL+ ++RKYGV++ I++ N +S + I+ G
Sbjct: 458 AGTTDP-IPAQKVTPDNRQL-THKVAKGETLYAIARKYGVTVSQIQQWNNISNQSLIHVG 515
Query: 137 KKLII 141
++LII
Sbjct: 516 QELII 520
>gi|375361613|ref|YP_005129652.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS
[Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|371567607|emb|CCF04457.1| D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS
[Bacillus amyloliquefaciens subsp. plantarum CAU B946]
Length = 484
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T +I PA +T+++ GD+LW L++ Y S+DAI AN L + G+ L
Sbjct: 9 LTASAIVGSALAVTPAEAQTIKVKSGDSLWKLAQNYNTSVDAITSANHLKSTVLSIGQTL 68
Query: 140 IIP 142
IP
Sbjct: 69 NIP 71
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 90 SEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S + ++V V+ GD+LW ++ + +S+ +K+ NGL+ D I AG+KL
Sbjct: 83 SSKNSGTTKSVYTVKSGDSLWLIASDFKMSVQELKKLNGLTSDLIRAGQKL 133
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW +++K+ V+ I+E N L D + G+KL I
Sbjct: 302 TYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTDVLQIGQKLTI 344
>gi|336113967|ref|YP_004568734.1| hypothetical protein BCO26_1289 [Bacillus coagulans 2-6]
gi|335367397|gb|AEH53348.1| 3D domain protein [Bacillus coagulans 2-6]
Length = 264
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTLWG+S+KY S+ +K+ N LS + IY +KL I
Sbjct: 35 GDTLWGISQKYNTSVKTLKQNNQLSTEMIYPSQKLTI 71
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 98 RTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ V +V+ GDTL +S+KYGV ++ IKE N LS D I+ +++I
Sbjct: 74 KNVYVVKAGDTLSDISKKYGVPVEQIKEWNDLSSDVIFPHDQIVI 118
>gi|340617713|ref|YP_004736166.1| lytic murein transglycosylase [Zobellia galactanivorans]
gi|339732510|emb|CAZ95778.1| Lytic murein transglycosylase, family GH23 [Zobellia
galactanivorans]
Length = 547
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G+ +S +K N L N Q I P + P T S T S AS
Sbjct: 446 GVRVSQIKQWNGLRSNNLRIGQRLTIY--------PRRMPGSTVASTKTSTSSKNYASGT 497
Query: 99 TVEIVR-GDTLWGLSRKY-GVSIDAIKEANGLSGDTIYAGKKL 139
VR GD+LW +S+KY G+S++ +++ NG+SG + G KL
Sbjct: 498 KTHTVRSGDSLWTISKKYPGISVENLRQWNGISGKNLKPGTKL 540
>gi|357051753|ref|ZP_09112919.1| hypothetical protein HMPREF9478_02902 [Enterococcus saccharolyticus
30_1]
gi|355379188|gb|EHG26354.1| hypothetical protein HMPREF9478_02902 [Enterococcus saccharolyticus
30_1]
Length = 287
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GD+LW ++ ++G ++D I ANGLS D I G++LI+
Sbjct: 248 VASGDSLWDIASRFGTTVDQIMAANGLSSDLIVVGQELIV 287
>gi|319942613|ref|ZP_08016921.1| membrane-bound lytic murein transglycosylase D [Sutterella
wadsworthensis 3_1_45B]
gi|319803792|gb|EFW00724.1| membrane-bound lytic murein transglycosylase D [Sutterella
wadsworthensis 3_1_45B]
Length = 703
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 76 QQPIVTKPSICTE-------KSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL 128
Q+ ++T P++ E S P + + RGD+L ++++YGVS ++K N L
Sbjct: 454 QRLVLTVPNVAREPIRTAAKTSAPSSSGHVIYAVKRGDSLASIAQRYGVSTASLKTTNRL 513
Query: 129 SGDTIYAGKKLIIP 142
S +TI AG++L IP
Sbjct: 514 SSNTIRAGQRLRIP 527
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 22/104 (21%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G++ + LK N L+ N Q I +S +PI+ +V +
Sbjct: 501 GVSTASLKTTNRLSSNTIRAGQRLRIPKSGEPIEEETTTYVVQQ---------------- 544
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL ++ +YGVS+ +K N L+ + + AG +L IP
Sbjct: 545 ------GDTLTSIANRYGVSVVKLKRLNRLTSNALKAGDRLEIP 582
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+V GDTL ++ ++G ++ ++ ANGL + G++L+IP
Sbjct: 606 VVSGDTLTSIAERFGTTVAKLRSANGLRSSRLSIGQRLVIP 646
>gi|425055821|ref|ZP_18459287.1| muramidase-2 [Enterococcus faecium 505]
gi|403033073|gb|EJY44599.1| muramidase-2 [Enterococcus faecium 505]
Length = 671
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 250 DSATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
P QQ IV K S T ++ PA +T + G+++WG++ +G+++ + E N + + I
Sbjct: 603 PGQQVIVKKGSSQTT-NQQSPAGSKTYTVKSGESVWGVADSHGITMAQLIEWNNIKNNFI 661
Query: 134 YAGKKLII 141
Y G+ LI+
Sbjct: 662 YPGQTLIV 669
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|408674825|ref|YP_006874573.1| Lytic transglycosylase catalytic [Emticicia oligotrophica DSM
17448]
gi|387856449|gb|AFK04546.1| Lytic transglycosylase catalytic [Emticicia oligotrophica DSM
17448]
Length = 516
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 38/56 (67%), Gaps = 8/56 (14%)
Query: 88 EKSEPEPASCRTVEIV-RGDTLWGLSRKYG-VSIDAIKEANGLSGDTIYAGKKLII 141
EKS+P+ IV RGDTLW +S++YG +SI+ IK+ NGL +++ G+KL I
Sbjct: 466 EKSKPK------YHIVQRGDTLWSISQRYGGISIEKIKKINGLRSNSVKKGQKLKI 515
>gi|386713369|ref|YP_006179692.1| cell wall hydrolase LytE [Halobacillus halophilus DSM 2266]
gi|384072925|emb|CCG44416.1| cell wall hydrolase LytE [Halobacillus halophilus DSM 2266]
Length = 281
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 76 QQPIV--TKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
QQ IV TK S + P +S RT + GD+LW ++ K+G+S+ A+ N LS TI
Sbjct: 67 QQLIVDKTKNSTIEDSDSPSSSSARTYTVKSGDSLWAIANKHGMSVSALMNLNHLSSATI 126
Query: 134 YAGKKL 139
Y +KL
Sbjct: 127 YPNQKL 132
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T ++ GDTLW +S+KY S+ +K N L + I G++LI+
Sbjct: 29 THQVESGDTLWRISQKYEASVTQLKLWNDLPTNVINVGQQLIV 71
>gi|366090219|ref|ZP_09456585.1| NlpC/P60 [Lactobacillus acidipiscis KCTC 13900]
Length = 347
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 12/103 (11%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G++I ++ LN +N + + Q +Q P + V P ++S P+
Sbjct: 47 GVSIKSIEQLNHINTGSH-------LINVGQNVQIPNKGNEVKTP---VKQSTPQTNITY 96
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
TV+ GD+L+ +++ +GVS+ A+++AN L+G + G+KL+I
Sbjct: 97 TVK--SGDSLYTIAQSHGVSVAALRQANSLTGSALQIGQKLVI 137
Score = 42.7 bits (99), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLS--GDTIYAGKKLIIP 142
T ++V DT+WGLS+KYGVSI +I++ N ++ I G+ + IP
Sbjct: 30 THKVVSNDTVWGLSQKYGVSIKSIEQLNHINTGSHLINVGQNVQIP 75
>gi|308180967|ref|YP_003925095.1| extracellular protein, gamma-D-glutamate-meso-diaminopimelate
muropeptidase () [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|308046458|gb|ADN99001.1| extracellular protein, gamma-D-glutamate-meso-diaminopimelate
muropeptidase (putative) [Lactobacillus plantarum subsp.
plantarum ST-III]
Length = 496
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T + GDTLW L+ KY S+ A++ NGLSGD I G+ + +P
Sbjct: 101 TYTVKAGDTLWALADKYNTSVHALQTLNGLSGDLIVVGQNIQVP 144
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-----DTIYAGKKLII 141
+ A+ ++ + DT+WGL++++GVS+ +I++ N + D IY G+ L I
Sbjct: 26 QAANAASITVKANDTVWGLAQQHGVSVQSIEKLNQIKASDGNIDLIYVGQNLQI 79
>gi|296332357|ref|ZP_06874818.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase (major
autolysin) [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305673637|ref|YP_003865309.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase [Bacillus
subtilis subsp. spizizenii str. W23]
gi|296150275|gb|EFG91163.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase (major
autolysin) [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411881|gb|ADM37000.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase (major
autolysin) [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 480
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T +I + PA T+++ GD+LW L++ Y S+ AI AN LS + G+ L
Sbjct: 9 LTASAIVSTTLAVTPAEAATIKVKSGDSLWKLAQNYNTSVAAITSANHLSTTVLSIGQTL 68
Query: 140 IIP 142
IP
Sbjct: 69 TIP 71
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LW ++ +Y +++ +K+ NGLS D I AG+KL
Sbjct: 98 GDSLWLIANEYKMTVQELKKLNGLSSDMIRAGQKL 132
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW +++K+ V+ I+E N L D + G+KL+I
Sbjct: 304 GDSLWVIAQKFNVTAQQIREKNNLKTDVLQIGQKLVI 340
Score = 37.7 bits (86), Expect = 1.8, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 27/45 (60%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
++ +T + GD+LW ++ Y +++ I+ +N L D +Y G+ L
Sbjct: 226 SATKTYTVKSGDSLWKIANNYNLTVQQIRNSNNLKSDMLYVGQVL 270
>gi|380032912|ref|YP_004889903.1| extracellular protein, NlpC/P60
family,gamma-D-glutamate-meso-diaminopimelate
muropeptidase [Lactobacillus plantarum WCFS1]
gi|342242155|emb|CCC79389.1| extracellular protein, NlpC/P60
family,gamma-D-glutamate-meso-diaminopimelate
muropeptidase [Lactobacillus plantarum WCFS1]
Length = 496
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T + GDTLW L+ KY S+ A++ NGLSGD I G+ + +P
Sbjct: 101 TYTVKAGDTLWALADKYNTSVHALQTLNGLSGDLIVVGQNIQVP 144
Score = 36.2 bits (82), Expect = 5.1, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-----DTIYAGKKLII 141
+ A+ ++ + DT+WGL++++GVS+ +I++ N + D IY G+ L I
Sbjct: 26 QAANAASITVKANDTVWGLAQQHGVSVQSIEKLNQIKASDGNIDLIYVGQNLQI 79
>gi|389775365|ref|ZP_10193331.1| N-acetylmuramoyl-L-alanine amidase [Rhodanobacter spathiphylli B39]
gi|388437406|gb|EIL94207.1| N-acetylmuramoyl-L-alanine amidase [Rhodanobacter spathiphylli B39]
Length = 495
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIV-RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
AS R V V RG++L ++R+YGVS+ A+K AN +S +T+ AG L IP
Sbjct: 445 ASGRDVHKVGRGESLSSIARQYGVSVGALKNANQISSNTVRAGTTLTIP 493
>gi|350265207|ref|YP_004876514.1| endopeptidase LytF [Bacillus subtilis subsp. spizizenii TU-B-10]
gi|349598094|gb|AEP85882.1| endopeptidase LytF [Bacillus subtilis subsp. spizizenii TU-B-10]
Length = 478
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T +I + PA T+++ GD+LW L++ Y S+ AI AN LS + G+ L
Sbjct: 9 LTASAIVSTTLAVTPAEAATIKVKSGDSLWKLAQNYNTSVAAITSANHLSTTVLSIGQTL 68
Query: 140 IIP 142
IP
Sbjct: 69 TIP 71
Score = 39.7 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LW ++ +Y +++ +K+ NGLS D I AG+KL
Sbjct: 98 GDSLWLIANEYKMTVQELKKLNGLSSDMIRAGQKL 132
Score = 38.5 bits (88), Expect = 0.90, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW +++K+ V+ I+E N L D + G+KL+I
Sbjct: 302 GDSLWVIAQKFNVTAQQIREKNNLKTDVLQVGQKLVI 338
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 27/47 (57%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+ ++ + + GD+LW ++ Y +++ I+ +N L D +Y G+ L
Sbjct: 224 QTSATKNYTVKSGDSLWKIANNYNLTVQQIRNSNNLKSDMLYVGQVL 270
>gi|294670711|ref|ZP_06735586.1| hypothetical protein NEIELOOT_02433 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307599|gb|EFE48842.1| hypothetical protein NEIELOOT_02433 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 325
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 70 PIQPPPQQPIVTKPSICTEKSEPEPA----SCRTVEIVRGDTLWGLSRKYGVSIDAIKEA 125
P+ PP P ++ PS+ P A + T ++VRGDT++ +S++Y ++ D ++
Sbjct: 73 PVYTPP--PTISSPSVSGSTYVPSYAPVDINAATHKVVRGDTVYNISKRYNITQDNLRAW 130
Query: 126 NGLSGDTIYAGKKLII 141
NGL+ + I G+ L +
Sbjct: 131 NGLTDNNISVGQTLRV 146
>gi|255026589|ref|ZP_05298575.1| autolysin [Listeria monocytogenes FSL J2-003]
Length = 585
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGK 137
+ P ++ +T + +GD+LW +SR+Y ++D IK N L+ + I+ G+
Sbjct: 538 NNPSNSTVKTYTVKKGDSLWAISRQYKTTVDNIKAWNKLTSNMIHVGQ 585
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + +V+GD+LW ++ V+I +K N L D IY G
Sbjct: 384 TSKPSTGTSTSKPSTGTSTNAKVYTVVKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 443
Query: 137 KKLII 141
+KL +
Sbjct: 444 QKLKV 448
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEP---ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T S+P + + + +GD+LW ++ V+I +K N L D IY G
Sbjct: 458 TSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 517
Query: 137 KKLII 141
+KL +
Sbjct: 518 QKLKV 522
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V++ +K N L D IY G+KL +
Sbjct: 327 SNAKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKV 373
>gi|395791194|ref|ZP_10470652.1| hypothetical protein MEC_00643 [Bartonella alsatica IBS 382]
gi|395408557|gb|EJF75167.1| hypothetical protein MEC_00643 [Bartonella alsatica IBS 382]
Length = 389
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 84 SICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ + + P R IV+ GDTL ++R+ G S++A+K NG+S ++IY G+ L+IP
Sbjct: 114 TLSRSQMDNSPIFRRNSYIVQSGDTLLSIARQIGTSVEALKLTNGISNNSIYIGQVLMIP 173
>gi|392950132|ref|ZP_10315689.1| extracellular protein, gamma-D-glutamate-meso-diaminopimelate
muropeptidase [Lactobacillus pentosus KCA1]
gi|392434414|gb|EIW12381.1| extracellular protein, gamma-D-glutamate-meso-diaminopimelate
muropeptidase [Lactobacillus pentosus KCA1]
Length = 377
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
A+ ++ I GDT+W S+KY VS++ I EANGLS + I AGK + IP
Sbjct: 41 ANADSMTIKAGDTVWAYSQKYHVSVNKIAEANGLSNPNLIIAGKTINIP 89
>gi|296133636|ref|YP_003640883.1| cell wall hydrolase SleB [Thermincola potens JR]
gi|296032214|gb|ADG82982.1| cell wall hydrolase SleB [Thermincola potens JR]
Length = 258
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 91 EPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ E A TV+ +GDTL+ + +++GVS A+K +NGL+ +T+Y G++L IP
Sbjct: 25 KAEAAVSYTVK--KGDTLYLIGQRFGVSAAALKASNGLTSNTVYPGQRLNIP 74
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 29/39 (74%)
Query: 104 RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+GDTL+ +++++G +++AIK A+ DT+Y G+ L IP
Sbjct: 89 KGDTLYLIAKRFGTTVEAIKSASNYWKDTLYVGQVLTIP 127
>gi|167631077|ref|YP_001681576.1| lysm domain protein [Heliobacterium modesticaldum Ice1]
gi|167593817|gb|ABZ85565.1| lysm domain protein, putative [Heliobacterium modesticaldum Ice1]
Length = 505
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T +++ GD+LW LS+K+G +I +I+ NGL+ D +Y G+ L I
Sbjct: 152 TYKVMSGDSLWRLSQKFGTTISSIQSLNGLTFDVLYVGQNLTI 194
>gi|227509708|ref|ZP_03939757.1| peptidoglycan-binding protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190858|gb|EEI70925.1| peptidoglycan-binding protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 206
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T + GD++W +S+++G SI+AI+ AN +S I G+KL+IP
Sbjct: 34 TYTVKSGDSVWAISQQFGSSINAIEGANSISNHLIMPGQKLVIP 77
>gi|448821682|ref|YP_007414844.1| Extracellular protein, NlpC/P60
family,gamma-D-glutamate-meso-diaminopimelate
muropeptidase [Lactobacillus plantarum ZJ316]
gi|448275179|gb|AGE39698.1| Extracellular protein, NlpC/P60
family,gamma-D-glutamate-meso-diaminopimelate
muropeptidase [Lactobacillus plantarum ZJ316]
Length = 496
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T + GDTLW L+ KY S+ A++ NGLSGD I G+ + +P
Sbjct: 101 TYTVKAGDTLWALADKYNTSVHALQTLNGLSGDLIVVGQNIQVP 144
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-----DTIYAGKKLII 141
+ A+ ++ + DT+WGL++++GVS+ +I++ N + D IY G+ L I
Sbjct: 26 QAANAASITVKANDTVWGLAQQHGVSVQSIEKLNQIKASDGNIDLIYVGQNLQI 79
>gi|379721146|ref|YP_005313277.1| hypothetical protein PM3016_3283 [Paenibacillus mucilaginosus 3016]
gi|378569818|gb|AFC30128.1| hypothetical protein PM3016_3283 [Paenibacillus mucilaginosus 3016]
Length = 361
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
R + +GD+LW +SRKYGV+I +K NGL D I G+ L
Sbjct: 111 RHYLVQKGDSLWSVSRKYGVTISQLKTWNGLKSDVIVPGQHL 152
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RGDTL+ +S K SI A+K+ANGL+ D + G+KL IP
Sbjct: 161 VQRGDTLYSISGKTETSIAALKKANGLTSDRLSEGQKLTIP 201
>gi|365903016|ref|ZP_09440839.1| cell wall-associated hydrolase [Lactobacillus malefermentans KCTC
3548]
Length = 317
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLS-----GDTIYAGKKLII 141
+ AS +TV + DT+W +++KY VS+ +I+ AN + D I+ G+KL I
Sbjct: 25 SQSASAKTVTVKSNDTVWSIAKKYNVSVKSIESANSIKKNASQNDVIFVGQKLTI 79
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ T ++ GDTL ++ KY ++ +++ N +SG TIYAG+KL +
Sbjct: 110 SSATNTYKVKSGDTLSKIASKYDTTVAKLQKLNKISGSTIYAGQKLTVS 158
>gi|337747314|ref|YP_004641476.1| hypothetical protein KNP414_03048 [Paenibacillus mucilaginosus
KNP414]
gi|336298503|gb|AEI41606.1| hypothetical protein KNP414_03048 [Paenibacillus mucilaginosus
KNP414]
Length = 361
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
R + +GD+LW +SRKYGV+I +K NGL D I G+ L
Sbjct: 111 RHYLVQKGDSLWSVSRKYGVTISQLKTWNGLKSDVIVPGQHL 152
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RGDTL+ +S K SI A+K+ANGL+ D + G+KL IP
Sbjct: 161 VQRGDTLYSISGKTETSIAALKKANGLTSDRLSEGQKLTIP 201
>gi|228471248|ref|ZP_04056061.1| glycoside hydrolase family 23 [Porphyromonas uenonis 60-3]
gi|228307063|gb|EEK16145.1| glycoside hydrolase family 23 [Porphyromonas uenonis 60-3]
Length = 457
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 8/99 (8%)
Query: 46 KALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRG 105
+AL L ++ E Q IAE+ + ++ Q I P+ T+KS+ +T ++ RG
Sbjct: 365 EALITLRRDHKEALSKQ-IAEAQEEVK----QEIKQAPA-PTQKSKASRGGHKTYKVRRG 418
Query: 106 DTLWGLSRKYGVSIDAIKEANGLSGDT--IYAGKKLIIP 142
DT+ +++++GVS AIK ANGL G + G++L IP
Sbjct: 419 DTISKIAKRHGVSASAIKRANGLKGRNPRLRPGQRLRIP 457
>gi|227512654|ref|ZP_03942703.1| peptidoglycan-binding protein [Lactobacillus buchneri ATCC 11577]
gi|227084119|gb|EEI19431.1| peptidoglycan-binding protein [Lactobacillus buchneri ATCC 11577]
Length = 206
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T + GD++W +S+++G SI+AI+ AN +S I G+KL+IP
Sbjct: 34 TYTVKSGDSVWAISQQFGSSINAIEGANSISNHLIMPGQKLVIP 77
>gi|443633458|ref|ZP_21117636.1| endopeptidase LytF [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443347192|gb|ELS61251.1| endopeptidase LytF [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 479
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T +I + PA T+++ GD+LW L++ Y S+ AI AN LS + G+ L
Sbjct: 9 LTASAIVSTTLAVAPAEAATIKVKSGDSLWKLAQNYNTSVAAITSANHLSTTVLSIGQTL 68
Query: 140 IIP 142
IP
Sbjct: 69 TIP 71
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LW ++ +Y +++ +K+ NGLS D I AG+KL
Sbjct: 98 GDSLWLIANEYKMTVQELKKLNGLSSDMIRAGQKL 132
Score = 39.3 bits (90), Expect = 0.53, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW +++K+ V+ I+E N L D + G+KL+I
Sbjct: 297 TYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTDVLQVGQKLVI 339
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T + + ++ + GD+LW ++ Y +++ I+ +N L D +Y G+ L
Sbjct: 216 TSSNSNQTSATTKYTVKSGDSLWKIANNYNLTVQQIRNSNNLKSDVLYVGQVL 268
>gi|395781989|ref|ZP_10462398.1| hypothetical protein MCY_00795 [Bartonella rattimassiliensis 15908]
gi|395419840|gb|EJF86126.1| hypothetical protein MCY_00795 [Bartonella rattimassiliensis 15908]
Length = 390
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 84 SICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ + + P R+ IV+ GDTL ++R+ GVS++A+K ANG++ ++I+ G+ L++P
Sbjct: 113 TLSRSQMDNSPIFRRSSYIVQSGDTLLSIARQIGVSVEALKLANGINSNSIHIGQVLVVP 172
>gi|254556980|ref|YP_003063397.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase [Lactobacillus
plantarum JDM1]
gi|254045907|gb|ACT62700.1| extracellular protein, gamma-D-glutamate-meso-diaminopimelate
muropeptidase (putative) [Lactobacillus plantarum JDM1]
Length = 496
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T + GDTLW L+ KY S+ A++ NGLSGD I G+ + +P
Sbjct: 101 TYTVKAGDTLWALADKYNTSVHALQTLNGLSGDLIVVGQNIQVP 144
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-----DTIYAGKKLII 141
+ A+ ++ + DT+WGL++++GVS+ +I++ N + D IY G+ L I
Sbjct: 26 QAANAASITVKANDTVWGLAQQHGVSVQSIEKLNQIKASDGNIDLIYVGQNLQI 79
>gi|300768294|ref|ZP_07078199.1| cell wall-associated hydrolase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|418275709|ref|ZP_12891032.1| extracellular protein, NlpC/P60 family,
gamma-D-glutamate-meso-diaminopimelate muropeptidase
[Lactobacillus plantarum subsp. plantarum NC8]
gi|300494358|gb|EFK29521.1| cell wall-associated hydrolase [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|376009260|gb|EHS82589.1| extracellular protein, NlpC/P60 family,
gamma-D-glutamate-meso-diaminopimelate muropeptidase
[Lactobacillus plantarum subsp. plantarum NC8]
Length = 496
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T + GDTLW L+ KY S+ A++ NGLSGD I G+ + +P
Sbjct: 101 TYTVKAGDTLWALADKYNTSVHALQTLNGLSGDLIVVGQNIQVP 144
Score = 35.8 bits (81), Expect = 5.7, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 5/54 (9%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-----DTIYAGKKLII 141
+ A+ ++ + DT+WGL++++GVS+ +I++ N + D IY G+ L I
Sbjct: 26 QAANAASITVKANDTVWGLAQQHGVSVQSIEKLNQIKASDGNIDLIYVGQNLQI 79
>gi|421081711|ref|ZP_15542620.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Pectobacterium
wasabiae CFBP 3304]
gi|401703524|gb|EJS93738.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Pectobacterium
wasabiae CFBP 3304]
Length = 553
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 12/85 (14%)
Query: 68 TQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVE----------IVRGDTLWGLSRKYGV 117
T P+Q P+Q ++P E T + RG+TL ++R+YGV
Sbjct: 406 THPMQSLPKQE--SRPLQAAENDRAMSGGNVTAAKASLGATRHTVARGETLSSIARRYGV 463
Query: 118 SIDAIKEANGLSGDTIYAGKKLIIP 142
S+ A+++ N L+ D ++ G++L IP
Sbjct: 464 SLAAMRDVNKLNKDIVWVGQRLNIP 488
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 22/108 (20%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G++++ ++ +N LNK+ Q I P+ T+++ PAS +
Sbjct: 462 GVSLAAMRDVNKLNKDIVWVGQRLNI------------------PATGTKQTASTPASKK 503
Query: 99 TV----EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++V+GD+L ++ +YGVS+ I++ N L ++ G+ LIIP
Sbjct: 504 AAPVKHKVVKGDSLSAIAARYGVSMKEIQQVNNLRSGSVQLGQTLIIP 551
>gi|386723835|ref|YP_006190161.1| hypothetical protein B2K_16990 [Paenibacillus mucilaginosus K02]
gi|384090960|gb|AFH62396.1| hypothetical protein B2K_16990 [Paenibacillus mucilaginosus K02]
Length = 357
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
R + +GD+LW +SRKYGV+I +K NGL D I G+ L
Sbjct: 107 RHYLVQKGDSLWSVSRKYGVTISQLKTWNGLKSDVIVPGQHL 148
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RGDTL+ +S K SI A+K+ANGL+ D + G+KL IP
Sbjct: 157 VQRGDTLYSISGKTETSIAALKKANGLTSDRLSEGQKLTIP 197
>gi|414153144|ref|ZP_11409471.1| Peptidoglycan-binding LysM (fragment) [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411455526|emb|CCO07373.1| Peptidoglycan-binding LysM (fragment) [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 246
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ +GD+LW +S+ YG +++ +K AN L+GD + G++L+I
Sbjct: 31 VKKGDSLWSISQAYGTTVEELKRANRLTGDNLSIGQRLLI 70
>gi|422322524|ref|ZP_16403565.1| hypothetical protein HMPREF0005_02305 [Achromobacter xylosoxidans
C54]
gi|317402505|gb|EFV83072.1| hypothetical protein HMPREF0005_02305 [Achromobacter xylosoxidans
C54]
Length = 472
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RT ++ +GDTL+ L+++YG S+DA++ N L G + G +L +P
Sbjct: 420 NVRTHKVRQGDTLFSLAKQYGTSVDALRALNNLKGSALKIGTQLRVP 466
>gi|410092121|ref|ZP_11288661.1| peptidoglycan-binding LysM:SLT:MLTD_N [Pseudomonas viridiflava
UASWS0038]
gi|409760549|gb|EKN45682.1| peptidoglycan-binding LysM:SLT:MLTD_N [Pseudomonas viridiflava
UASWS0038]
Length = 533
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 45 LKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR 104
L LNP K R PQ + + P + ++T S+ T K E E + + + R
Sbjct: 302 LIQLNPAFKKRLTIDGPQHL------LVPTSKAQLLT-ASLSTMKQE-ELVAWQPYRVRR 353
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL L+ +Y V++ +IK N L+G+ + AG+ L IP
Sbjct: 354 GDTLESLASRYQVTVSSIKSNNKLAGNRLKAGQSLSIP 391
Score = 36.2 bits (82), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+ +S +K+ N L NR + Q I P++P ++P S +PA RT
Sbjct: 366 VTVSSIKSNNKLAGNRLKAGQSLSI-----PVKPGLN---TSQPVFEALASNEKPARSRT 417
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ GD L +++ V ++ ++ N LSG + G+ L++
Sbjct: 418 YKVRNGDNLTTIAQANKVDVEDLQRWNKLSGHKLKIGQTLVM 459
>gi|391231997|ref|ZP_10268203.1| LysM repeat-containing protein [Opitutaceae bacterium TAV1]
gi|391221658|gb|EIQ00079.1| LysM repeat-containing protein [Opitutaceae bacterium TAV1]
Length = 382
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 11/96 (11%)
Query: 47 ALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGD 106
AL P++ N E T P P+++ P P+ T P A+ + E+ +GD
Sbjct: 81 ALTPVDHNYGELT-PAPLSDP----APAGLTPVDTSPVPLAPV-----AATTSYEVQKGD 130
Query: 107 TLWGLSRKYGVSIDAIKEANGLSGD-TIYAGKKLII 141
+LW ++RK+G+ + AN +SG+ T+ G+KL++
Sbjct: 131 SLWTIARKHGIKTTELAAANNISGNATLRIGQKLVV 166
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+V GDTL ++RK GV + A++ AN L GD + G+ L IP
Sbjct: 186 VVSGDTLGAIARKQGVKLAALRSANNLRGDNLRVGQVLTIP 226
>gi|390435531|ref|ZP_10224069.1| N-acetylmuramoyl-L-alanine amidase [Pantoea agglomerans IG1]
Length = 556
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RG+TL G++ KYGVS+ ++E N L D ++ G++L +P
Sbjct: 453 VTRGETLSGIAAKYGVSMSTLREMNTLKRDVVWVGQRLKVP 493
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 16/111 (14%)
Query: 32 AGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSE 91
+G G+++S L+ +N L ++ + Q ++ P + + +
Sbjct: 460 SGIAAKYGVSMSTLREMNTLKRD---------VVWVGQRLKVPAS-------AAASRTTR 503
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
P ++V GD+L G++ YGVS AI + N L + G+ L IP
Sbjct: 504 ATPRGVVRHKVVVGDSLTGIAAHYGVSPKAIMQTNNLKSTNVMLGQNLKIP 554
>gi|386713966|ref|YP_006180289.1| peptidoglycan-binding LysM [Halobacillus halophilus DSM 2266]
gi|384073522|emb|CCG45015.1| peptidoglycan-binding LysM [Halobacillus halophilus DSM 2266]
Length = 265
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 4/48 (8%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEAN----GLSGDTIYAGKKLIIP 142
T IV GD+L+ ++R++GVS+ I+EAN G GD I+ LIIP
Sbjct: 114 TYRIVSGDSLYSIARRFGVSMADIEEANADRPGFQGDVIWPDYHLIIP 161
>gi|330752111|emb|CBL87072.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase [uncultured
Flavobacteriia bacterium]
Length = 277
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 79 IVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKK 138
IV I S+ + + VE+ GDTL+ ++ KY +S+D I + N L TIY G++
Sbjct: 213 IVKNEKIDMVISKNKKNNIHRVEV--GDTLYSIAYKYSISVDDIVKENKLENSTIYKGQE 270
Query: 139 LIIP 142
LIIP
Sbjct: 271 LIIP 274
>gi|335430776|ref|ZP_08557663.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [Haloplasma
contractile SSD-17B]
gi|334887587|gb|EGM25914.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [Haloplasma
contractile SSD-17B]
Length = 518
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 75 PQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIY 134
P Q ++ + + + T + GD LW +++++ VSID I+EAN L+ D++
Sbjct: 196 PNQALIIPLATDASQERASTVNPITYTVQSGDDLWKIAKRHAVSIDDIREANNLTTDSLD 255
Query: 135 AGKKLIIP 142
G+ L+IP
Sbjct: 256 IGQNLVIP 263
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 28/38 (73%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD+LW ++ +Y V++DA+K+AN ++ DTI G L +P
Sbjct: 100 GDSLWTIANQYNVTVDALKQANNITTDTIVVGDTLTVP 137
>gi|257869421|ref|ZP_05649074.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus gallinarum EG2]
gi|257803585|gb|EEV32407.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus gallinarum EG2]
Length = 294
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GD+LW ++ ++G ++D I ANGLS D I G++LI+
Sbjct: 255 VASGDSLWDIASRFGTTVDQIMAANGLSSDLIVVGQELIV 294
>gi|158320971|ref|YP_001513478.1| peptidoglycan-binding LysM [Alkaliphilus oremlandii OhILAs]
gi|158141170|gb|ABW19482.1| Peptidoglycan-binding LysM [Alkaliphilus oremlandii OhILAs]
Length = 713
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 5/63 (7%)
Query: 85 ICTEKSEPEPASC---RTVEIVR-GDTLWGLSRKYGVSIDAIKEAN-GLSGDTIYAGKKL 139
IC K+ P P +C T IVR GDT + ++R+Y +S+DA+ AN ++ D + G+++
Sbjct: 117 ICIPKTTPPPQTCPVGTTPYIVRPGDTFFSIARRYNISVDALIAANPNVNPDNLQIGQQI 176
Query: 140 IIP 142
IP
Sbjct: 177 CIP 179
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Query: 105 GDTLWGLSRKYGVSIDAIKEAN-GLSGDTIYAGKKLIIP 142
GDT + ++R+Y +S+DA+ AN ++ D +Y G+ + IP
Sbjct: 82 GDTFFSIARRYNISVDALIAANPNVNPDALYVGQVICIP 120
>gi|319953049|ref|YP_004164316.1| lytic transglycosylase [Cellulophaga algicola DSM 14237]
gi|319421709|gb|ADV48818.1| Lytic transglycosylase catalytic [Cellulophaga algicola DSM 14237]
Length = 544
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 5/104 (4%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
G+ +S +K N L N + Q I S +P+ + TK S T ++ +
Sbjct: 440 GVRVSEIKRWNNLRSNNLKIGQRLTI-HSKKPVSVASK---TTKSSPKTSTKSAIASATK 495
Query: 99 TVEIVRGDTLWGLSRKY-GVSIDAIKEANGLSGDTIYAGKKLII 141
+ GD+LW +S K+ GVS++ +K+ NG+SG+ + G KL++
Sbjct: 496 VYTVKSGDSLWTISNKHPGVSVENLKKWNGISGNNLKLGTKLVL 539
>gi|428160967|gb|AFY97800.1| lipoprotein, partial [Bartonella quintana]
Length = 154
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 84 SICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLS-GDTIYAGKKLII 141
+I + P R IV+ GDTL ++R+ G+S++A+K ANG+S ++IY G+ L+I
Sbjct: 4 TISRSQMNNTPLFRRNSYIVQSGDTLLSIARQIGISVEALKLANGISNNNSIYIGQVLMI 63
Query: 142 P 142
P
Sbjct: 64 P 64
>gi|220931943|ref|YP_002508851.1| peptidase M23B [Halothermothrix orenii H 168]
gi|219993253|gb|ACL69856.1| peptidase M23B [Halothermothrix orenii H 168]
Length = 324
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 98 RTVEIV-RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R + +V RGD L+ L+++YG ++ IK AN L + I+ G+ L+IP
Sbjct: 138 RIIHVVQRGDALYNLAKRYGTEVETIKLANNLHSNRIFVGQTLVIP 183
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 104 RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+GDTL ++ K G ++ AIK+ N L IY G+KL IP
Sbjct: 85 KGDTLSEIALKTGSTVQAIKDRNNLKSSKIYTGQKLYIP 123
>gi|304315986|ref|YP_003851131.1| peptidoglycan-binding lysin domain [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777488|gb|ADL68047.1| Peptidoglycan-binding lysin domain [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 303
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 97 CRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
C T +V+ GDTLW +S ++G+S+D I AN + IY G+ +IIP
Sbjct: 141 CPTYYVVQPGDTLWSISNRFGISLDEIIRANYFMDPNMIYPGQTIIIP 188
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 93 EPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANG--LSGDTIYAGKKLIIP 142
P R V +V+ GDTL+ ++ ++ ++DAI +AN + IY G+++IIP
Sbjct: 205 HPKEGRMVYVVKPGDTLYTIAMRFNTTVDAILKANPDIQNPSLIYPGQRIIIP 257
>gi|409387301|ref|ZP_11239541.1| hypothetical protein BN193_09585 [Lactococcus raffinolactis 4877]
gi|399205608|emb|CCK20456.1| hypothetical protein BN193_09585 [Lactococcus raffinolactis 4877]
Length = 515
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 77 QPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSI-DAIKEANGLSGDTIYA 135
Q +V KP++ ++ EP T + GDTLW +++ VS+ D +K + S D I+A
Sbjct: 149 QELVIKPAVAAKRPEPIVIPAVTYTVKSGDTLWDIAQAQNVSVEDIVKHSKLSSTDYIFA 208
Query: 136 GKKLII 141
G++LII
Sbjct: 209 GQELII 214
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 6/77 (7%)
Query: 66 ESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSI-DAIKE 124
E++QP Q P P V K S T ++ +PA TV+ GDTL +++ +GVS+ D IK
Sbjct: 82 ETSQPAQIIPT-PTVAKAS--TAPAKAQPAVTYTVQ--AGDTLSQIAQTHGVSVEDIIKY 136
Query: 125 ANGLSGDTIYAGKKLII 141
+ + D IY G++L+I
Sbjct: 137 SKLNNTDFIYIGQELVI 153
>gi|149280105|ref|ZP_01886229.1| hemagglutinin [Pedobacter sp. BAL39]
gi|149229119|gb|EDM34514.1| hemagglutinin [Pedobacter sp. BAL39]
Length = 306
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
SE AS + + +GDTL+ LS+++ +SID IK N L+ D I G+KLI+
Sbjct: 253 SEQPLASGDSYIVKKGDTLYNLSKRFNISIDDIKLLNNLNEDGIKIGQKLIL 304
>gi|163790212|ref|ZP_02184645.1| phiSLT ORF484-like protein, lysin [Carnobacterium sp. AT7]
gi|159874487|gb|EDP68558.1| phiSLT ORF484-like protein, lysin [Carnobacterium sp. AT7]
Length = 337
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 93 EPASCRTV-EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
EP + ++V+GDTLW + RK+ V++ +K N L+ DTI +KL++
Sbjct: 178 EPVKVENIYKVVKGDTLWSIGRKFNVTVKDLKAWNNLTSDTISIDQKLVL 227
>gi|433654167|ref|YP_007297875.1| putative glycosyl hydrolase [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433292356|gb|AGB18178.1| putative glycosyl hydrolase [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 303
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 97 CRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
C T +V+ GDTLW +S ++G+S+D I AN + IY G+ +IIP
Sbjct: 141 CPTYYVVQPGDTLWSISNRFGISLDEIIRANYFMDPNMIYPGQTIIIP 188
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Query: 93 EPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANG--LSGDTIYAGKKLIIP 142
P R V +V+ GDTL+ ++ ++ ++DAI +AN + IY G+++IIP
Sbjct: 205 HPKEGRMVYVVKPGDTLYTIAMRFNTTVDAILKANPDIQNPSLIYPGQRIIIP 257
>gi|166031858|ref|ZP_02234687.1| hypothetical protein DORFOR_01559 [Dorea formicigenerans ATCC
27755]
gi|166028311|gb|EDR47068.1| LysM domain protein [Dorea formicigenerans ATCC 27755]
Length = 129
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 9/64 (14%)
Query: 88 EKSE-PEPASCRTVEIVRGDTLWGLSRKY-GVSIDAIKEA-------NGLSGDTIYAGKK 138
+KSE PE +++EI GDTLWG++++Y G D+I + NGL+ D I+AG+
Sbjct: 59 DKSEQPEQKFYKSIEIKEGDTLWGIAKEYRGDDYDSIYDYIDEVMSINGLTSDQIHAGQY 118
Query: 139 LIIP 142
L +
Sbjct: 119 LTVA 122
>gi|386820930|ref|ZP_10108146.1| muramidase (flagellum-specific) [Joostella marina DSM 19592]
gi|386426036|gb|EIJ39866.1| muramidase (flagellum-specific) [Joostella marina DSM 19592]
Length = 274
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + +GDTL+ +S++Y VS+DAIK NGL + I G+ L +
Sbjct: 231 TYRVSKGDTLYSISKRYNVSVDAIKRKNGLRNNNIKIGQILYL 273
>gi|386311051|ref|YP_006007107.1| N-acetylmuramoyl-L-alanine amidase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|433551882|ref|ZP_20507922.1| N-acetylmuramoyl-L-alanine amidase [Yersinia enterocolitica IP
10393]
gi|318607424|emb|CBY28922.1| N-acetylmuramoyl-L-alanine amidase [Yersinia enterocolitica subsp.
palearctica Y11]
gi|431787180|emb|CCO70962.1| N-acetylmuramoyl-L-alanine amidase [Yersinia enterocolitica IP
10393]
Length = 645
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 55 RNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRK 114
R+ +QP+P+ S Q + +P ++ +S+ ++ RG+TL G++ +
Sbjct: 495 RSGVSQPEPVVSSAQGGRVSTTKPAAVG-AVTKNRSQIH-------KVQRGETLSGIASQ 546
Query: 115 YGVSIDAIKEANGLSGDTIYAGKKLIIP 142
YGVS+ +++ N L D ++ G++L +P
Sbjct: 547 YGVSMAVLRQNNTLKNDVVWVGQRLKVP 574
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ RGDTL ++ +YGVS+ I+ AN + + G+ L IP
Sbjct: 602 QVKRGDTLSAIAARYGVSMSEIERANKIKSGNVQLGQTLTIP 643
>gi|423711301|ref|ZP_17685621.1| hypothetical protein MCQ_00348 [Bartonella washoensis Sb944nv]
gi|395415215|gb|EJF81650.1| hypothetical protein MCQ_00348 [Bartonella washoensis Sb944nv]
Length = 390
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 30/38 (78%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL ++R+ G+S++A+K NG+S ++IY G+ L+IP
Sbjct: 136 GDTLLSIARQIGISVEALKLENGISSNSIYIGQILMIP 173
>gi|392529718|ref|ZP_10276855.1| hypothetical protein CmalA3_03363 [Carnobacterium maltaromaticum
ATCC 35586]
Length = 350
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 37/59 (62%)
Query: 79 IVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGK 137
I+ ++ + + + + T ++ +G+T+W +++ YG++I +KE N + DT+YAG+
Sbjct: 13 IIQFINLSMKSVDAQAGNSETHKVQKGETVWRIAKSYGITIAELKEWNDMESDTVYAGQ 71
>gi|85817395|gb|EAQ38575.1| N-acetylmuramidase precursor [Dokdonia donghaensis MED134]
gi|330752818|emb|CBL88337.1| mannosyl-glycoprotein endo-beta-N-acetylglucosamidase [uncultured
Dokdonia sp.]
Length = 277
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ +G+TL+ L++KY V++D +KE NG+ GD I+ G+ L I
Sbjct: 231 VRKGETLYRLAKKYDVTVDQLKEWNGIDGDNIFEGQVLYI 270
>gi|332160019|ref|YP_004296596.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|418239918|ref|ZP_12866462.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia enterocolitica subsp. palearctica PhRBD_Ye1]
gi|325664249|gb|ADZ40893.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia enterocolitica subsp. palearctica 105.5R(r)]
gi|330862100|emb|CBX72266.1| N-acetylmuramoyl-L-alanine amidase amiB [Yersinia enterocolitica
W22703]
gi|351780744|gb|EHB22809.1| putative N-acetylmuramoyl-L-alanine amidase-family protein
[Yersinia enterocolitica subsp. palearctica PhRBD_Ye1]
Length = 621
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 55 RNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRK 114
R+ +QP+P+ S Q + +P ++ +S+ ++ RG+TL G++ +
Sbjct: 471 RSGVSQPEPVVSSAQGGRVSTTKPAAVG-AVTKNRSQIH-------KVQRGETLSGIASQ 522
Query: 115 YGVSIDAIKEANGLSGDTIYAGKKLIIP 142
YGVS+ +++ N L D ++ G++L +P
Sbjct: 523 YGVSMAVLRQNNTLKNDVVWVGQRLKVP 550
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ RGDTL ++ +YGVS+ I+ AN + + G+ L IP
Sbjct: 578 QVKRGDTLSAIAARYGVSMSEIERANKIKSGNVQLGQTLTIP 619
>gi|392531603|ref|ZP_10278740.1| autolysin [Carnobacterium maltaromaticum ATCC 35586]
Length = 497
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLI 140
IV GDTLW L +GVS+ + E N L+ D I+ ++LI
Sbjct: 352 IVSGDTLWDLGNTFGVSVQELMEWNQLTSDLIFVNQELI 390
>gi|452127340|ref|ZP_21939923.1| membrane-bound lytic murein transglycosylase D [Bordetella holmesii
F627]
gi|452130711|ref|ZP_21943283.1| membrane-bound lytic murein transglycosylase D [Bordetella holmesii
H558]
gi|451920636|gb|EMD70782.1| membrane-bound lytic murein transglycosylase D [Bordetella holmesii
H558]
gi|451922435|gb|EMD72580.1| membrane-bound lytic murein transglycosylase D [Bordetella holmesii
F627]
Length = 470
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RT ++ GDTL+ L+++YG ++DA++ N L G+ + G +L +P
Sbjct: 418 NVRTHKVGTGDTLFSLAKRYGTTVDALRALNNLKGNNLKVGSQLRVP 464
>gi|357123040|ref|XP_003563221.1| PREDICTED: uncharacterized protein LOC100832309 [Brachypodium
distachyon]
Length = 339
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDT-IYAGKKLIIP 142
E+ R DTL G++ KYGV I IK ANGL D+ ++A K L+IP
Sbjct: 48 EVSRMDTLAGIAIKYGVEISDIKRANGLVSDSQMFAHKALLIP 90
>gi|424865675|ref|ZP_18289533.1| low molecular weight phosphotyrosine protein phosphatase [SAR86
cluster bacterium SAR86B]
gi|400758530|gb|EJP72736.1| low molecular weight phosphotyrosine protein phosphatase [SAR86
cluster bacterium SAR86B]
Length = 488
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
T EIV GD LW L+RKY + IK+ N L + + G L+IP
Sbjct: 324 THEIVNGDNLWSLARKYDTEVSIIKQVNYLQSNLLKPGSNLLIP 367
>gi|389795620|ref|ZP_10198737.1| N-acetylmuramoyl-L-alanine amidase [Rhodanobacter fulvus Jip2]
gi|388430540|gb|EIL87700.1| N-acetylmuramoyl-L-alanine amidase [Rhodanobacter fulvus Jip2]
Length = 483
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 45/90 (50%)
Query: 53 KNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLS 112
KN E+T P + Q Q Q S + + + ++ RG++L ++
Sbjct: 392 KNYFESTPPPGTWFAAQAAQRSGVQLASADKSTTSSSTRADAGVRDLHKVNRGESLGSIA 451
Query: 113 RKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R+YGVS+ A+K AN ++ DT+ AG L IP
Sbjct: 452 RQYGVSVSALKNANQMNSDTVRAGVMLAIP 481
>gi|293603364|ref|ZP_06685792.1| membrane-bound lytic murein transglycosylase D [Achromobacter
piechaudii ATCC 43553]
gi|292818274|gb|EFF77327.1| membrane-bound lytic murein transglycosylase D [Achromobacter
piechaudii ATCC 43553]
Length = 462
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RT ++ +GDTL+ L+++YG S+DA++ N L G + G L +P
Sbjct: 410 NVRTHKVRQGDTLFSLAKQYGTSVDALRALNNLKGSALKVGTALRVP 456
>gi|414083884|ref|YP_006992592.1| mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein
[Carnobacterium maltaromaticum LMA28]
gi|412997468|emb|CCO11277.1| mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein
[Carnobacterium maltaromaticum LMA28]
Length = 497
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLI 140
IV GDTLW L +GVS+ + E N L+ D I+ ++LI
Sbjct: 352 IVSGDTLWDLGNTFGVSVQELMEWNQLTSDLIFVNQELI 390
>gi|440750405|ref|ZP_20929649.1| Membrane-bound lytic murein transglycosylase D precursor
[Mariniradius saccharolyticus AK6]
gi|436481446|gb|ELP37627.1| Membrane-bound lytic murein transglycosylase D precursor
[Mariniradius saccharolyticus AK6]
Length = 534
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 90 SEPEPASCRTVE-IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S E + R + +V+G+TL+ LS+ YGVS+D IK+ N LS + I G+K+ I
Sbjct: 479 STAERNANRVIHTVVKGETLFRLSQLYGVSVDDIKKWNNLSDNNIRIGQKITI 531
>gi|319650831|ref|ZP_08004968.1| hypothetical protein HMPREF1013_01574 [Bacillus sp. 2_A_57_CT2]
gi|317397429|gb|EFV78130.1| hypothetical protein HMPREF1013_01574 [Bacillus sp. 2_A_57_CT2]
Length = 212
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 26 AAVAKTAGFVVFSGIAISIL--------KALNPLNKNRNETTQPQPIAESTQPIQPPPQQ 77
AAV +AGF V S A ++ L +++ + T + + P Q
Sbjct: 29 AAVIASAGFSVSSKEAQALTGTYKVKHGDTLYKISREHDMTVKELKAVNHLKSDTIHPGQ 88
Query: 78 PIVTKPSICTEKSEPEPASCRT--VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYA 135
+ + TE+ EP + T +V GDTLWG++++Y ++++ +K N L D +
Sbjct: 89 SL----EVRTERHTEEPFNNETAVYTVVPGDTLWGIAKRYRMNVNELKRLNKLKSDMVLI 144
Query: 136 GKKLIIP 142
+KL I
Sbjct: 145 NQKLTIK 151
>gi|398305446|ref|ZP_10509032.1| endopeptidase LytF [Bacillus vallismortis DV1-F-3]
Length = 479
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T +I + PA T+++ GD+LW L++ Y S+ AI AN LS + G+ L
Sbjct: 9 LTASAIVSTTLAVTPAEAATIKVKSGDSLWKLAQNYNTSVAAITSANHLSTTVLSIGQTL 68
Query: 140 IIP 142
IP
Sbjct: 69 TIP 71
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 31/47 (65%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+P++ +T + GD+LW ++ Y +++ I+++N L DT+Y G+ L
Sbjct: 224 QPSATKTYTVKSGDSLWKIANNYNLTVQQIRKSNSLKSDTLYVGQVL 270
Score = 39.3 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LW ++ +Y +++ +K+ NGLS D I AG+KL
Sbjct: 98 GDSLWLIANEYKMTVQELKKLNGLSSDMIRAGQKL 132
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + GD+LW +++K+ V+ I+E N L D + G+KL+I
Sbjct: 299 TYTVKSGDSLWVIAQKFNVTAQQIREKNNLKTDVLQVGQKLVI 341
>gi|255017587|ref|ZP_05289713.1| autolysin [Listeria monocytogenes FSL F2-515]
Length = 366
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 80 VTKPSICTEKSEPEPAS---CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
+KPS T KS+P + + +V+GD+LW ++ V+I +K N L D IY G
Sbjct: 230 TSKPSTGTSKSKPSTGTSTNAKVYTVVKGDSLWRIANNNKVTIANLKAWNNLKSDFIYPG 289
Query: 137 KKLII 141
+KL +
Sbjct: 290 QKLKV 294
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 91 EPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
++ + +V+GD+LW ++ + V++ +K N L D IY G+KL +
Sbjct: 169 NTNTSNAKIYTVVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKV 219
>gi|257888995|ref|ZP_05668648.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium 1,141,733]
gi|293377847|ref|ZP_06624031.1| putative autolysin [Enterococcus faecium PC4.1]
gi|424764601|ref|ZP_18192021.1| muramidase-2 [Enterococcus faecium TX1337RF]
gi|431050758|ref|ZP_19493427.1| muramidase-2 [Enterococcus faecium E1590]
gi|431753579|ref|ZP_19542248.1| muramidase-2 [Enterococcus faecium E2620]
gi|431758747|ref|ZP_19547370.1| muramidase-2 [Enterococcus faecium E3083]
gi|431764071|ref|ZP_19552617.1| muramidase-2 [Enterococcus faecium E3548]
gi|257825058|gb|EEV51981.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium 1,141,733]
gi|292643531|gb|EFF61657.1| putative autolysin [Enterococcus faecium PC4.1]
gi|402418691|gb|EJV50981.1| muramidase-2 [Enterococcus faecium TX1337RF]
gi|430560296|gb|ELA99600.1| muramidase-2 [Enterococcus faecium E1590]
gi|430611612|gb|ELB48689.1| muramidase-2 [Enterococcus faecium E2620]
gi|430616562|gb|ELB53458.1| muramidase-2 [Enterococcus faecium E3083]
gi|430621375|gb|ELB58142.1| muramidase-2 [Enterococcus faecium E3548]
Length = 668
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
P QQ IV K S T ++ PA +T + G+++WG++ +G+++ + E N + + I
Sbjct: 600 PGQQVIVKKGSSQTT-NQQSPAGSKTYTVKSGESVWGVADSHGITMAQLIEWNNIKNNFI 658
Query: 134 YAGKKLII 141
Y G+ LI+
Sbjct: 659 YPGQTLIV 666
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 414 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 450
>gi|403382496|ref|ZP_10924553.1| peptidoglycan-binding LysM [Paenibacillus sp. JC66]
Length = 272
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 4/46 (8%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEAN----GLSGDTIYAGKKLIIP 142
E+ +GD+L+ +SRK+G+S+D + AN GLS D +Y G +L +P
Sbjct: 118 EVEQGDSLYRISRKFGISLDELLNANKERPGLSLDVVYPGFRLAVP 163
>gi|332663044|ref|YP_004445832.1| peptidoglycan-binding lysin domain-containing protein
[Haliscomenobacter hydrossis DSM 1100]
gi|332331858|gb|AEE48959.1| Peptidoglycan-binding lysin domain protein [Haliscomenobacter
hydrossis DSM 1100]
Length = 520
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+ + LKALN L+ + T Q T IQ + P++ T + +S R
Sbjct: 23 VKVRHLKALNGLHSAKLTTGQ-------TLLIQILADEEPEESPALKTRGLLDDSSSVRI 75
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GD+L+ ++R Y +S+ +K+ N LS D I GK+LI+
Sbjct: 76 HTVQAGDSLYRIARLYNLSVAQLKKDNNLSSDQIGIGKQLIV 117
>gi|297544613|ref|YP_003676915.1| spore coat assembly protein SafA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842388|gb|ADH60904.1| spore coat assembly protein SafA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 199
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 93 EPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGD--TIYAGKKLIIP 142
P +C+T+ V+ GDT+W ++ +GVS+DA+ AN D IY G+++ IP
Sbjct: 145 SPETCKTIYTVKPGDTMWSIANMFGVSLDALIRANPQISDPNLIYPGQQICIP 197
Score = 43.9 bits (102), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 95 ASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGD--TIYAGKKLIIP 142
CRT V+ GDT+W ++ K+GVS+D + AN D IY G+++ IP
Sbjct: 29 GHCRTFYTVQPGDTMWSIANKFGVSLDCLIRANPQISDPNLIYPGQRICIP 79
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 94 PASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGD--TIYAGKKLIIP 142
P +C+T+ V+ GDT+W ++ +G+S+D + AN D IY G+++ IP
Sbjct: 87 PETCKTIYTVKPGDTMWSIANMFGISLDCLIRANPQISDPNLIYPGQQICIP 138
>gi|344339454|ref|ZP_08770383.1| HNS-dependent expression A [Thiocapsa marina 5811]
gi|343800758|gb|EGV18703.1| HNS-dependent expression A [Thiocapsa marina 5811]
Length = 195
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T +V GD L+ +S+++ VS+DA+K AN L+ D + G+KL I
Sbjct: 52 TYVVVAGDDLFAISQRFKVSVDALKAANNLTSDVVKTGEKLRI 94
>gi|289578334|ref|YP_003476961.1| spore coat assembly protein SafA [Thermoanaerobacter italicus Ab9]
gi|289528047|gb|ADD02399.1| spore coat assembly protein SafA [Thermoanaerobacter italicus Ab9]
Length = 199
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 93 EPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGD--TIYAGKKLIIP 142
P +C+T+ V+ GDT+W ++ +GVS+DA+ AN D IY G+++ IP
Sbjct: 145 SPETCKTIYTVKPGDTMWSIANMFGVSLDALIRANPQISDPNLIYPGQQICIP 197
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 95 ASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGD--TIYAGKKLIIP 142
CRT V+ GDT+W ++ K+G+S+D + AN D IY G+++ IP
Sbjct: 29 GHCRTFYTVQPGDTMWSIANKFGISLDCLIRANPQISDPNLIYPGQRICIP 79
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 94 PASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGD--TIYAGKKLIIP 142
P +C+T+ V+ GDT+W ++ +G+S+D + AN D IY G+++ IP
Sbjct: 87 PETCKTIYTVKPGDTMWSIANMFGISLDCLIRANPQISDPNLIYPGQQICIP 138
>gi|227550268|ref|ZP_03980317.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Enterococcus faecium TX1330]
gi|257897589|ref|ZP_05677242.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium Com12]
gi|227180593|gb|EEI61565.1| N-acetylmuramoyl-L-alanine amidase precursor (cell wall hydrolase)
(autolysin) [Enterococcus faecium TX1330]
gi|257834154|gb|EEV60575.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium Com12]
Length = 668
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
P QQ IV K S T ++ PA +T + G+++WG++ +G+++ + E N + + I
Sbjct: 600 PGQQVIVKKGSSQTT-NQQSPAGSKTYTVKSGESVWGVADSHGITMAQLIEWNNIKNNFI 658
Query: 134 YAGKKLII 141
Y G+ LI+
Sbjct: 659 YPGQTLIV 666
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 414 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 450
>gi|261419203|ref|YP_003252885.1| cell wall hydrolase SleB [Geobacillus sp. Y412MC61]
gi|297530828|ref|YP_003672103.1| cell wall hydrolase SleB [Geobacillus sp. C56-T3]
gi|319766019|ref|YP_004131520.1| cell wall hydrolase SleB [Geobacillus sp. Y412MC52]
gi|448237152|ref|YP_007401210.1| hypothetical protein GHH_c09200 [Geobacillus sp. GHH01]
gi|261375660|gb|ACX78403.1| cell wall hydrolase SleB [Geobacillus sp. Y412MC61]
gi|297254080|gb|ADI27526.1| cell wall hydrolase SleB [Geobacillus sp. C56-T3]
gi|317110885|gb|ADU93377.1| cell wall hydrolase SleB [Geobacillus sp. Y412MC52]
gi|445205994|gb|AGE21459.1| hypothetical protein GHH_c09200 [Geobacillus sp. GHH01]
Length = 194
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 85 ICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
I + A+ TV+ RGDTLW ++++YGV + +++ N GD +Y G+KL+IP
Sbjct: 15 IFFFAGHADAATIHTVK--RGDTLWKIAKQYGVPLKQLQQTN-RKGDWLYPGEKLVIP 69
>gi|125974304|ref|YP_001038214.1| peptidoglycan-binding LysM [Clostridium thermocellum ATCC 27405]
gi|256003477|ref|ZP_05428467.1| Peptidoglycan-binding LysM [Clostridium thermocellum DSM 2360]
gi|385779772|ref|YP_005688937.1| Peptidoglycan-binding lysin domain [Clostridium thermocellum DSM
1313]
gi|419722347|ref|ZP_14249491.1| Peptidoglycan-binding lysin domain-containing protein [Clostridium
thermocellum AD2]
gi|419725949|ref|ZP_14252983.1| Peptidoglycan-binding lysin domain-containing protein [Clostridium
thermocellum YS]
gi|125714529|gb|ABN53021.1| Peptidoglycan-binding lysin domain-containing protein [Clostridium
thermocellum ATCC 27405]
gi|255992501|gb|EEU02593.1| Peptidoglycan-binding LysM [Clostridium thermocellum DSM 2360]
gi|316941452|gb|ADU75486.1| Peptidoglycan-binding lysin domain [Clostridium thermocellum DSM
1313]
gi|380770725|gb|EIC04611.1| Peptidoglycan-binding lysin domain-containing protein [Clostridium
thermocellum YS]
gi|380781532|gb|EIC11186.1| Peptidoglycan-binding lysin domain-containing protein [Clostridium
thermocellum AD2]
Length = 503
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD+L+ +S+++GV+I IK AN L+ D IY G++L IP
Sbjct: 8 GDSLYTISQRFGVTIAQIKSANQLTSDIIYVGQRLYIP 45
>gi|403234189|ref|ZP_10912775.1| peptidoglycan hydrolase [Bacillus sp. 10403023]
Length = 368
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 8/87 (9%)
Query: 56 NETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRK 114
N T +P ST P P P + TEK + + A TV V+ GDTL G++
Sbjct: 150 NTTEKPN---NSTSPSTEKPNNP----TNQDTEKPQVDKAPSATVYTVKSGDTLSGIALN 202
Query: 115 YGVSIDAIKEANGLSGDTIYAGKKLII 141
Y VS+ +K+ N LS D IY G+KL I
Sbjct: 203 YKVSVANLKKWNSLSSDIIYIGQKLNI 229
>gi|397169872|ref|ZP_10493299.1| lytic murein transglycosylase [Alishewanella aestuarii B11]
gi|396088400|gb|EJI85983.1| lytic murein transglycosylase [Alishewanella aestuarii B11]
Length = 528
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLII 141
PA+ +I RGDTLW LSRKY V++ I+E N L +G + G++L I
Sbjct: 414 PATAVKHQIQRGDTLWDLSRKYDVTVAQIREWNKLAAGAPLREGQQLTI 462
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 37 FSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPAS 96
+GI+I+ L+ALNP T P+ + P++ + + + +P
Sbjct: 295 LAGISIADLQALNP--GYSQWATAPEGPHQLVLPVEKAEHFSAQLAQTPVEKMMQWQPYQ 352
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ GDTL ++++YG+S+ AI++ N L+ + I G+ L++P
Sbjct: 353 VKS-----GDTLGAIAKRYGISVAAIQKLNNLTNNNIRIGQNLLLP 393
>gi|189220293|ref|YP_001940933.1| LysM domain containing protein [Methylacidiphilum infernorum V4]
gi|189187151|gb|ACD84336.1| LysM domain containing protein [Methylacidiphilum infernorum V4]
Length = 193
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ +GD+LW +SRKY V+++A+ N L D + G++LIIP
Sbjct: 118 VKKGDSLWKISRKYKVTVEALMAINELKDDRLKPGQELIIP 158
>gi|147678934|ref|YP_001213149.1| hypothetical protein PTH_2599 [Pelotomaculum thermopropionicum SI]
gi|146275031|dbj|BAF60780.1| hypothetical membrane protein [Pelotomaculum thermopropionicum SI]
Length = 266
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 29/38 (76%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
G++L+ +SR YGVS+D++ EANG+ IY G++L IP
Sbjct: 34 GESLFTISRAYGVSLDSLMEANGIWDSMIYPGQQLYIP 71
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 92 PEPASCR--TVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
PE + R T VR GD+L+ + +K+G+ I ANGL+G IY G L IP
Sbjct: 71 PESGAKRSSTYYTVRTGDSLYLIGQKFGMGYQEIMWANGLTGPQIYPGMVLYIP 124
>gi|410460790|ref|ZP_11314461.1| spore germination protein [Bacillus azotoformans LMG 9581]
gi|409926580|gb|EKN63740.1| spore germination protein [Bacillus azotoformans LMG 9581]
Length = 471
Score = 45.1 bits (105), Expect = 0.011, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 94 PASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLIIP 142
P S T I G+TLW +++KYGV+ ++I +AN L+ + +Y G KLIIP
Sbjct: 47 PVSGTTHVIKSGETLWSIAQKYGVTTNSIIQANQLTNPNLLYPGTKLIIP 96
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 100 VEIVR-GDTLWGLSRKYGVSIDAIKEANGLS-GDTIYAGKKLIIP 142
+ +VR GDTLW ++ +Y V+I++I E NGL + + G+ LIIP
Sbjct: 3 IHVVRSGDTLWQIASRYNVNINSIVEINGLQFPNQLVIGQSLIIP 47
>gi|293571994|ref|ZP_06683007.1| autolysin [Enterococcus faecium E980]
gi|430842870|ref|ZP_19460777.1| muramidase-2 [Enterococcus faecium E1007]
gi|431064127|ref|ZP_19493474.1| muramidase-2 [Enterococcus faecium E1604]
gi|431131434|ref|ZP_19498985.1| muramidase-2 [Enterococcus faecium E1613]
gi|431739303|ref|ZP_19528238.1| muramidase-2 [Enterococcus faecium E1972]
gi|431742436|ref|ZP_19531329.1| muramidase-2 [Enterococcus faecium E2039]
gi|291607918|gb|EFF37227.1| autolysin [Enterococcus faecium E980]
gi|430492581|gb|ELA68945.1| muramidase-2 [Enterococcus faecium E1007]
gi|430565994|gb|ELB05117.1| muramidase-2 [Enterococcus faecium E1613]
gi|430568768|gb|ELB07798.1| muramidase-2 [Enterococcus faecium E1604]
gi|430596031|gb|ELB33888.1| muramidase-2 [Enterococcus faecium E1972]
gi|430600194|gb|ELB37852.1| muramidase-2 [Enterococcus faecium E2039]
Length = 668
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
P QQ IV K S T + PA +T + G+++WG++ +G+++ + E N + + I
Sbjct: 600 PGQQVIVKKGSSQTTNQQA-PAGSKTYTVKSGESVWGVADSHGITMAQLIEWNNIKNNFI 658
Query: 134 YAGKKLII 141
Y G+ LI+
Sbjct: 659 YPGQTLIV 666
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 414 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 450
>gi|257900326|ref|ZP_05679979.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium Com15]
gi|257838238|gb|EEV63312.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium Com15]
Length = 668
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
P QQ IV K S T + PA +T + G+++WG++ +G+++ + E N + + I
Sbjct: 600 PGQQVIVKKGSSQTTNQQA-PAGSKTYTVKSGESVWGVADSHGITMAQLIEWNNIKNNFI 658
Query: 134 YAGKKLII 141
Y G+ LI+
Sbjct: 659 YPGQTLIV 666
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 414 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 450
>gi|146298737|ref|YP_001193328.1| lytic transglycosylase [Flavobacterium johnsoniae UW101]
gi|146153155|gb|ABQ04009.1| Candidate lytic murein transglycosylase; Glycoside hydrolase family
23 [Flavobacterium johnsoniae UW101]
Length = 610
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 13/136 (9%)
Query: 19 GSGDGREAAVAKTAGFVVFSG-----------IAISILKALNPLNKNRNETTQPQPIAES 67
S D ++ +T +VV +G I+ LK LN L N + +++
Sbjct: 473 ASNDDKDKVSIQTVEYVVAAGDNLGSIAKKFGTTIADLKELNDLTSNNIGLGKTLVVSKI 532
Query: 68 TQPIQPPPQQPIVTKPSICTEKSEPEPASC-RTVEIVRGDTLWGLSRKY-GVSIDAIKEA 125
IQ P I + +K P S + +GD+L+ +S+KY GV+I IK+
Sbjct: 533 VTEIQEPVTTAIASNSVDAFKKKAPSAKSASEDYYVKKGDSLYSISKKYPGVTISDIKKW 592
Query: 126 NGLSGDTIYAGKKLII 141
NG+ + I G KL I
Sbjct: 593 NGIKDEDIKPGMKLKI 608
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 8/111 (7%)
Query: 39 GIAISILKALNPLNKN---RNETTQPQP-IAESTQPIQPPPQQPIVTKPS--ICTEKSEP 92
+ IS LK N L N T + + I S + ++ P P + K + +
Sbjct: 419 NVNISDLKKWNNLKTNAIALGRTLKIKSDIDASAKVVKEPKSIPAIEKNTEEAIASNDDK 478
Query: 93 EPASCRTVEIV--RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ S +TVE V GD L +++K+G +I +KE N L+ + I GK L++
Sbjct: 479 DKVSIQTVEYVVAAGDNLGSIAKKFGTTIADLKELNDLTSNNIGLGKTLVV 529
>gi|163847326|ref|YP_001635370.1| peptidoglycan-binding protein LysM [Chloroflexus aurantiacus
J-10-fl]
gi|222525172|ref|YP_002569643.1| peptidoglycan-binding LysM [Chloroflexus sp. Y-400-fl]
gi|163668615|gb|ABY34981.1| Peptidoglycan-binding LysM [Chloroflexus aurantiacus J-10-fl]
gi|222449051|gb|ACM53317.1| Peptidoglycan-binding LysM [Chloroflexus sp. Y-400-fl]
Length = 189
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 15/107 (14%)
Query: 42 ISILKALNP---LNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCR 98
+ +L L P + T +P P +E T ++P P+ P++ +S P R
Sbjct: 92 LPVLPTLTPRPTVTITATATPEPSPTSEPTPTVEPTPEP----TPTLAPTESGP-----R 142
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLS---GDTIYAGKKLIIP 142
+ GDTL ++ ++GV+I+A+ +AN L+ GD + G++L+IP
Sbjct: 143 RYTVQAGDTLRTIAEQFGVTIEALLQANNLTPAQGDNLQVGQELVIP 189
>gi|346306257|ref|ZP_08848416.1| hypothetical protein HMPREF9457_00125 [Dorea formicigenerans
4_6_53AFAA]
gi|345901987|gb|EGX71780.1| hypothetical protein HMPREF9457_00125 [Dorea formicigenerans
4_6_53AFAA]
Length = 129
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 9/64 (14%)
Query: 88 EKSE-PEPASCRTVEIVRGDTLWGLSRKY-GVSIDAIKEA-------NGLSGDTIYAGKK 138
+KSE PE +++EI GDTLWG++++Y G D+I + NGL+ D I+AG+
Sbjct: 59 DKSEQPEQKFYKSIEIKEGDTLWGIAKEYRGDDYDSIYDYIDEVMSINGLTSDQIHAGQY 118
Query: 139 LIIP 142
L +
Sbjct: 119 LTVA 122
>gi|293627804|gb|ADE58433.1| lipoprotein [Bartonella quintana]
Length = 154
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 84 SICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLII 141
+I + P R IV+ GDTL ++R+ G+S++A+K ANG+ S ++IY G+ L+I
Sbjct: 4 TISRSQMNNTPLFRRNSYIVQSGDTLLSIARQIGISVEALKLANGISSNNSIYIGQVLMI 63
Query: 142 P 142
P
Sbjct: 64 P 64
>gi|69244088|ref|ZP_00602624.1| Peptidoglycan-binding LysM:Mannosyl-glycoprotein
endo-beta-N-acetylglucosamidase [Enterococcus faecium
DO]
gi|257891522|ref|ZP_05671175.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium 1,231,410]
gi|257894537|ref|ZP_05674190.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium 1,231,408]
gi|260562447|ref|ZP_05832957.1| muramidase-2 [Enterococcus faecium C68]
gi|293563983|ref|ZP_06678390.1| autolysin [Enterococcus faecium E1162]
gi|314940362|ref|ZP_07847524.1| LysM domain protein [Enterococcus faecium TX0133a04]
gi|314943341|ref|ZP_07850116.1| LysM domain protein [Enterococcus faecium TX0133C]
gi|314949259|ref|ZP_07852605.1| LysM domain protein [Enterococcus faecium TX0082]
gi|314993193|ref|ZP_07858574.1| LysM domain protein [Enterococcus faecium TX0133B]
gi|314997355|ref|ZP_07862312.1| LysM domain protein [Enterococcus faecium TX0133a01]
gi|383329900|ref|YP_005355784.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus faecium Aus0004]
gi|389869714|ref|YP_006377137.1| muramidase-2 [Enterococcus faecium DO]
gi|415893216|ref|ZP_11550108.1| autolysin [Enterococcus faecium E4453]
gi|424840565|ref|ZP_18265201.1| muramidase-2 [Enterococcus faecium R501]
gi|424978242|ref|ZP_18391186.1| muramidase-2 [Enterococcus faecium P1123]
gi|424988274|ref|ZP_18400604.1| muramidase-2 [Enterococcus faecium ERV38]
gi|425009090|ref|ZP_18420123.1| muramidase-2 [Enterococcus faecium ERV1]
gi|425013888|ref|ZP_18424590.1| muramidase-2 [Enterococcus faecium E417]
gi|425035899|ref|ZP_18440705.1| muramidase-2 [Enterococcus faecium 514]
gi|425043423|ref|ZP_18447663.1| muramidase-2 [Enterococcus faecium 511]
gi|425047347|ref|ZP_18451307.1| muramidase-2 [Enterococcus faecium 509]
gi|430832591|ref|ZP_19450632.1| muramidase-2 [Enterococcus faecium E0333]
gi|430848347|ref|ZP_19466168.1| muramidase-2 [Enterococcus faecium E1133]
gi|430856242|ref|ZP_19473944.1| muramidase-2 [Enterococcus faecium E1392]
gi|431564879|ref|ZP_19519788.1| muramidase-2 [Enterococcus faecium E1731]
gi|431750411|ref|ZP_19539129.1| muramidase-2 [Enterococcus faecium E2297]
gi|431769048|ref|ZP_19557477.1| muramidase-2 [Enterococcus faecium E1321]
gi|431771707|ref|ZP_19560086.1| muramidase-2 [Enterococcus faecium E1644]
gi|431773274|ref|ZP_19561602.1| muramidase-2 [Enterococcus faecium E2369]
gi|431780684|ref|ZP_19568856.1| muramidase-2 [Enterococcus faecium E4389]
gi|68196545|gb|EAN10971.1| Peptidoglycan-binding LysM:Mannosyl-glycoprotein
endo-beta-N-acetylglucosamidase [Enterococcus faecium
DO]
gi|257827882|gb|EEV54508.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium 1,231,410]
gi|257830916|gb|EEV57523.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium 1,231,408]
gi|260073132|gb|EEW61477.1| muramidase-2 [Enterococcus faecium C68]
gi|291604073|gb|EFF33600.1| autolysin [Enterococcus faecium E1162]
gi|313588569|gb|EFR67414.1| LysM domain protein [Enterococcus faecium TX0133a01]
gi|313592307|gb|EFR71152.1| LysM domain protein [Enterococcus faecium TX0133B]
gi|313597953|gb|EFR76798.1| LysM domain protein [Enterococcus faecium TX0133C]
gi|313640402|gb|EFS04982.1| LysM domain protein [Enterococcus faecium TX0133a04]
gi|313644358|gb|EFS08938.1| LysM domain protein [Enterococcus faecium TX0082]
gi|364092848|gb|EHM35175.1| autolysin [Enterococcus faecium E4453]
gi|378939594|gb|AFC64666.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus faecium Aus0004]
gi|388534963|gb|AFK60155.1| muramidase-2 [Enterococcus faecium DO]
gi|402920642|gb|EJX41139.1| muramidase-2 [Enterococcus faecium R501]
gi|402962892|gb|EJX79798.1| muramidase-2 [Enterococcus faecium P1123]
gi|402972543|gb|EJX88741.1| muramidase-2 [Enterococcus faecium ERV38]
gi|402990472|gb|EJY05343.1| muramidase-2 [Enterococcus faecium ERV1]
gi|402999976|gb|EJY14134.1| muramidase-2 [Enterococcus faecium E417]
gi|403016535|gb|EJY29349.1| muramidase-2 [Enterococcus faecium 514]
gi|403020010|gb|EJY32575.1| muramidase-2 [Enterococcus faecium 511]
gi|403034190|gb|EJY45655.1| muramidase-2 [Enterococcus faecium 509]
gi|430479714|gb|ELA56928.1| muramidase-2 [Enterococcus faecium E0333]
gi|430535296|gb|ELA75713.1| muramidase-2 [Enterococcus faecium E1133]
gi|430545126|gb|ELA85113.1| muramidase-2 [Enterococcus faecium E1392]
gi|430589678|gb|ELB27804.1| muramidase-2 [Enterococcus faecium E1731]
gi|430609639|gb|ELB46822.1| muramidase-2 [Enterococcus faecium E2297]
gi|430628133|gb|ELB64587.1| muramidase-2 [Enterococcus faecium E1321]
gi|430632871|gb|ELB69067.1| muramidase-2 [Enterococcus faecium E1644]
gi|430636891|gb|ELB72941.1| muramidase-2 [Enterococcus faecium E2369]
gi|430639072|gb|ELB74957.1| muramidase-2 [Enterococcus faecium E4389]
Length = 672
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
P QQ IV K S + + S +T + G+++W ++ +G+++ + E N + + I
Sbjct: 604 PGQQVIVKKGSSQSTNQQSVTGS-KTYTVKSGESVWSVADSHGITMAQLIEWNNIKNNFI 662
Query: 134 YAGKKLII 141
Y G+ LI+
Sbjct: 663 YPGQTLIV 670
Score = 35.4 bits (80), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + G+++W ++ K G+++D + E N + + IY G++LI+
Sbjct: 489 TYTVKAGESVWSVANKNGITMDQLIEWNNIKNNFIYPGQQLIV 531
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|218887308|ref|YP_002436629.1| lytic transglycosylase [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218758262|gb|ACL09161.1| Lytic transglycosylase catalytic [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 618
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
A R IV+ GDTL+G+++ G S++ +++ANGLSG + G+KL IP
Sbjct: 459 AERRATYIVKQGDTLYGIAKAQGSSVETLQKANGLSGIALQLGQKLYIP 507
>gi|311103917|ref|YP_003976770.1| LysM domain-containing protein 1 [Achromobacter xylosoxidans A8]
gi|310758606|gb|ADP14055.1| LysM domain protein 1 [Achromobacter xylosoxidans A8]
Length = 472
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RT ++ +GDTL+ L+++YG S+DA++ N + G + G +L +P
Sbjct: 420 NVRTHKVRQGDTLFSLAKQYGTSVDALRALNNIKGSALKVGSQLRVP 466
>gi|150391825|ref|YP_001321874.1| peptidoglycan-binding protein LysM [Alkaliphilus metalliredigens
QYMF]
gi|149951687|gb|ABR50215.1| Peptidoglycan-binding LysM [Alkaliphilus metalliredigens QYMF]
Length = 341
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 91 EPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
E P+ TV+ +GDT W +S ++GV+++ + + NGL +GD IY G+++ IP
Sbjct: 78 EKAPSQAHTVQ--KGDTPWTISNQFGVNLNELLQVNGLRAGDEIYPGQRITIP 128
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLS-GDTIYAGKKLIIP 142
+ RT + GD W LS KYG+ + + NG++ T+ G+K+ IP
Sbjct: 148 TTRTHTVASGDNTWSLSIKYGIPFAELLKVNGMTENSTLRIGQKITIP 195
>gi|430821768|ref|ZP_19440356.1| muramidase-2 [Enterococcus faecium E0045]
gi|430438107|gb|ELA48592.1| muramidase-2 [Enterococcus faecium E0045]
Length = 672
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
P QQ IV K S + + S +T + G+++W ++ +G+++ + E N + + I
Sbjct: 604 PGQQVIVKKGSSQSTNQQSVTGS-KTYTVKSGESVWSVADSHGITMAQLIEWNNIKNNFI 662
Query: 134 YAGKKLII 141
Y G+ LI+
Sbjct: 663 YPGQTLIV 670
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + G+++W ++ K G+++D + E N + + IY G++LI+
Sbjct: 489 TYTVKAGESVWSVANKNGITMDQLIEWNNIKNNFIYPGQQLIV 531
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|424687018|ref|ZP_18123673.1| putative gametolysin, partial [Enterococcus faecalis ERV25]
gi|424711881|ref|ZP_18144088.1| putative gametolysin, partial [Enterococcus faecalis ERV65]
gi|402366091|gb|EJV00492.1| putative gametolysin, partial [Enterococcus faecalis ERV25]
gi|402382619|gb|EJV16273.1| putative gametolysin, partial [Enterococcus faecalis ERV65]
Length = 548
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 433 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 472
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 368 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 504 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 540
>gi|293627806|gb|ADE58434.1| lipoprotein [Bartonella quintana]
Length = 154
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 84 SICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLII 141
+I + P R IV+ GDTL ++R+ G+S++A+K ANG+ S ++IY G+ L+I
Sbjct: 4 TISRSQMNNTPLFRRNSYIVQSGDTLLSIARQIGISVEALKLANGISSNNSIYIGQVLMI 63
Query: 142 P 142
P
Sbjct: 64 P 64
>gi|261206893|ref|ZP_05921583.1| muramidase-2 [Enterococcus faecium TC 6]
gi|289567064|ref|ZP_06447461.1| muramidase-2 [Enterococcus faecium D344SRF]
gi|294613888|ref|ZP_06693826.1| autolysin [Enterococcus faecium E1636]
gi|430827388|ref|ZP_19445531.1| muramidase-2 [Enterococcus faecium E0164]
gi|430830030|ref|ZP_19448097.1| muramidase-2 [Enterococcus faecium E0269]
gi|430922056|ref|ZP_19485379.1| muramidase-2 [Enterococcus faecium E1575]
gi|431220406|ref|ZP_19501340.1| muramidase-2 [Enterococcus faecium E1620]
gi|260078871|gb|EEW66572.1| muramidase-2 [Enterococcus faecium TC 6]
gi|289161143|gb|EFD09046.1| muramidase-2 [Enterococcus faecium D344SRF]
gi|291593253|gb|EFF24824.1| autolysin [Enterococcus faecium E1636]
gi|430443996|gb|ELA53908.1| muramidase-2 [Enterococcus faecium E0164]
gi|430479154|gb|ELA56423.1| muramidase-2 [Enterococcus faecium E0269]
gi|430553872|gb|ELA93547.1| muramidase-2 [Enterococcus faecium E1575]
gi|430569501|gb|ELB08502.1| muramidase-2 [Enterococcus faecium E1620]
Length = 672
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
P QQ IV K S + + S +T + G+++W ++ +G+++ + E N + + I
Sbjct: 604 PGQQVIVKKGSSQSTNQQSVTGS-KTYTVKSGESVWSVADSHGITMAQLIEWNNIKNNFI 662
Query: 134 YAGKKLII 141
Y G+ LI+
Sbjct: 663 YPGQTLIV 670
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + G+++W ++ K G+++D + E N + + IY G++LI+
Sbjct: 489 TYTVKAGESVWSVANKNGITMDQLIEWNNIKNNFIYPGQQLIV 531
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|431705100|ref|ZP_19525161.1| muramidase-2 [Enterococcus faecium E1904]
gi|430596702|gb|ELB34524.1| muramidase-2 [Enterococcus faecium E1904]
Length = 672
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
P QQ IV K S + + S +T + G+++W ++ +G+++ + E N + + I
Sbjct: 604 PGQQVIVKKGSSQSTNQQSVTGS-KTYTVKSGESVWSVADSHGITMAQLIEWNNIKNNFI 662
Query: 134 YAGKKLII 141
Y G+ LI+
Sbjct: 663 YPGQTLIV 670
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + G+++W ++ K G+++D + E N + + IY G++LI+
Sbjct: 489 TYTVKAGESVWSVANKNGITMDQLIEWNNIKNNFIYPGQQLIV 531
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|430834139|ref|ZP_19452148.1| muramidase-2 [Enterococcus faecium E0679]
gi|430485662|gb|ELA62562.1| muramidase-2 [Enterococcus faecium E0679]
Length = 672
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
P QQ IV K S + + S +T + G+++W ++ +G+++ + E N + + I
Sbjct: 604 PGQQVIVKKGSSQSTNQQSVTGS-KTYTVKSGESVWSVADSHGITMAQLIEWNNIKNNFI 662
Query: 134 YAGKKLII 141
Y G+ LI+
Sbjct: 663 YPGQTLIV 670
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + G+++W ++ K G+++D + E N + + IY G++LI+
Sbjct: 489 TYTVKAGESVWSVANKNGITMDQLIEWNNIKNNFIYPGQQLIV 531
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|257886336|ref|ZP_05665989.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium 1,231,501]
gi|293553707|ref|ZP_06674330.1| autolysin [Enterococcus faecium E1039]
gi|430850233|ref|ZP_19467996.1| muramidase-2 [Enterococcus faecium E1185]
gi|431388040|ref|ZP_19511646.1| muramidase-2 [Enterococcus faecium E1627]
gi|431470606|ref|ZP_19514444.1| muramidase-2 [Enterococcus faecium E1630]
gi|431520975|ref|ZP_19516689.1| muramidase-2 [Enterococcus faecium E1634]
gi|431761347|ref|ZP_19549921.1| muramidase-2 [Enterococcus faecium E3346]
gi|257822192|gb|EEV49322.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium 1,231,501]
gi|291602133|gb|EFF32362.1| autolysin [Enterococcus faecium E1039]
gi|430535858|gb|ELA76249.1| muramidase-2 [Enterococcus faecium E1185]
gi|430580305|gb|ELB18778.1| muramidase-2 [Enterococcus faecium E1627]
gi|430583577|gb|ELB21936.1| muramidase-2 [Enterococcus faecium E1630]
gi|430585118|gb|ELB23419.1| muramidase-2 [Enterococcus faecium E1634]
gi|430621488|gb|ELB58249.1| muramidase-2 [Enterococcus faecium E3346]
Length = 672
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
P QQ IV K S + + S +T + G+++W ++ +G+++ + E N + + I
Sbjct: 604 PGQQVIVKKGSSQSTNQQSVTGS-KTYTVKSGESVWSVADSHGITMAQLIEWNNIKNNFI 662
Query: 134 YAGKKLII 141
Y G+ LI+
Sbjct: 663 YPGQTLIV 670
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + G+++W ++ K G+++D + E N + + IY G++LI+
Sbjct: 489 TYTVKAGESVWSVANKNGITMDQLIEWNNIKNNFIYPGQQLIV 531
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|257880448|ref|ZP_05660101.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium 1,230,933]
gi|257883261|ref|ZP_05662914.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium 1,231,502]
gi|293569438|ref|ZP_06680734.1| autolysin [Enterococcus faecium E1071]
gi|294619130|ref|ZP_06698622.1| autolysin [Enterococcus faecium E1679]
gi|294622190|ref|ZP_06701255.1| autolysin [Enterococcus faecium U0317]
gi|406586149|ref|ZP_11061085.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus sp. GMD2E]
gi|406590135|ref|ZP_11064531.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus sp. GMD1E]
gi|410936357|ref|ZP_11368224.1| muramidase-2 [Enterococcus sp. GMD5E]
gi|416135164|ref|ZP_11598464.1| autolysin [Enterococcus faecium E4452]
gi|424788992|ref|ZP_18215719.1| muramidase-2 [Enterococcus faecium V689]
gi|424811436|ref|ZP_18236694.1| muramidase-2 [Enterococcus faecium S447]
gi|424860012|ref|ZP_18283982.1| muramidase-2 [Enterococcus faecium R499]
gi|424887116|ref|ZP_18310723.1| muramidase-2 [Enterococcus faecium R497]
gi|424951775|ref|ZP_18366842.1| muramidase-2 [Enterococcus faecium R496]
gi|424954325|ref|ZP_18369228.1| muramidase-2 [Enterococcus faecium R494]
gi|424965803|ref|ZP_18379710.1| muramidase-2 [Enterococcus faecium P1190]
gi|424968016|ref|ZP_18381679.1| muramidase-2 [Enterococcus faecium P1140]
gi|424974247|ref|ZP_18387491.1| muramidase-2 [Enterococcus faecium P1137]
gi|424982543|ref|ZP_18395194.1| muramidase-2 [Enterococcus faecium ERV99]
gi|424995696|ref|ZP_18407561.1| muramidase-2 [Enterococcus faecium ERV168]
gi|425001512|ref|ZP_18413022.1| muramidase-2 [Enterococcus faecium ERV161]
gi|425004400|ref|ZP_18415713.1| muramidase-2 [Enterococcus faecium ERV102]
gi|425021574|ref|ZP_18431817.1| muramidase-2 [Enterococcus faecium C497]
gi|425033804|ref|ZP_18438743.1| muramidase-2 [Enterococcus faecium 515]
gi|425053067|ref|ZP_18456631.1| muramidase-2 [Enterococcus faecium 506]
gi|427397567|ref|ZP_18890049.1| muramidase-2 [Enterococcus durans FB129-CNAB-4]
gi|430845627|ref|ZP_19463510.1| muramidase-2 [Enterococcus faecium E1050]
gi|430861004|ref|ZP_19478598.1| muramidase-2 [Enterococcus faecium E1573]
gi|430969346|ref|ZP_19487911.1| muramidase-2 [Enterococcus faecium E1576]
gi|431016523|ref|ZP_19490374.1| muramidase-2 [Enterococcus faecium E1578]
gi|431242710|ref|ZP_19503798.1| muramidase-2 [Enterococcus faecium E1622]
gi|431261944|ref|ZP_19505774.1| muramidase-2 [Enterococcus faecium E1623]
gi|431322869|ref|ZP_19509081.1| muramidase-2 [Enterococcus faecium E1626]
gi|431747756|ref|ZP_19536526.1| muramidase-2 [Enterococcus faecium E2134]
gi|431755380|ref|ZP_19544030.1| muramidase-2 [Enterococcus faecium E2883]
gi|431777946|ref|ZP_19566186.1| muramidase-2 [Enterococcus faecium E2560]
gi|431783750|ref|ZP_19571842.1| muramidase-2 [Enterococcus faecium E6012]
gi|431786851|ref|ZP_19574847.1| muramidase-2 [Enterococcus faecium E6045]
gi|447913788|ref|YP_007395200.1| Membrane-bound lytic murein transglycosylase D precursor
[Enterococcus faecium NRRL B-2354]
gi|257814676|gb|EEV43434.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium 1,230,933]
gi|257818919|gb|EEV46247.1| beta-1,4-N-acetylmuramoylhydrolase [Enterococcus faecium 1,231,502]
gi|291587858|gb|EFF19710.1| autolysin [Enterococcus faecium E1071]
gi|291594616|gb|EFF26001.1| autolysin [Enterococcus faecium E1679]
gi|291598287|gb|EFF29379.1| autolysin [Enterococcus faecium U0317]
gi|364092263|gb|EHM34650.1| autolysin [Enterococcus faecium E4452]
gi|402917086|gb|EJX37902.1| muramidase-2 [Enterococcus faecium S447]
gi|402922854|gb|EJX43199.1| muramidase-2 [Enterococcus faecium V689]
gi|402925997|gb|EJX46072.1| muramidase-2 [Enterococcus faecium R499]
gi|402928896|gb|EJX48704.1| muramidase-2 [Enterococcus faecium R496]
gi|402933389|gb|EJX52827.1| muramidase-2 [Enterococcus faecium R497]
gi|402937078|gb|EJX56218.1| muramidase-2 [Enterococcus faecium R494]
gi|402942547|gb|EJX61123.1| muramidase-2 [Enterococcus faecium P1190]
gi|402953133|gb|EJX70873.1| muramidase-2 [Enterococcus faecium P1140]
gi|402957108|gb|EJX74519.1| muramidase-2 [Enterococcus faecium P1137]
gi|402960598|gb|EJX77724.1| muramidase-2 [Enterococcus faecium ERV99]
gi|402976623|gb|EJX92498.1| muramidase-2 [Enterococcus faecium ERV168]
gi|402986295|gb|EJY01427.1| muramidase-2 [Enterococcus faecium ERV161]
gi|402989488|gb|EJY04412.1| muramidase-2 [Enterococcus faecium ERV102]
gi|403006275|gb|EJY19933.1| muramidase-2 [Enterococcus faecium C497]
gi|403008283|gb|EJY21802.1| muramidase-2 [Enterococcus faecium 515]
gi|403031666|gb|EJY43264.1| muramidase-2 [Enterococcus faecium 506]
gi|404461586|gb|EKA07483.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus sp. GMD2E]
gi|404469797|gb|EKA14516.1| N-acetylmuramoyl-L-alanine amidase [Enterococcus sp. GMD1E]
gi|410735303|gb|EKQ77217.1| muramidase-2 [Enterococcus sp. GMD5E]
gi|425722116|gb|EKU85014.1| muramidase-2 [Enterococcus durans FB129-CNAB-4]
gi|430495366|gb|ELA71545.1| muramidase-2 [Enterococcus faecium E1050]
gi|430550743|gb|ELA90521.1| muramidase-2 [Enterococcus faecium E1573]
gi|430554767|gb|ELA94339.1| muramidase-2 [Enterococcus faecium E1576]
gi|430559387|gb|ELA98743.1| muramidase-2 [Enterococcus faecium E1578]
gi|430571664|gb|ELB10546.1| muramidase-2 [Enterococcus faecium E1622]
gi|430576611|gb|ELB15254.1| muramidase-2 [Enterococcus faecium E1623]
gi|430578189|gb|ELB16762.1| muramidase-2 [Enterococcus faecium E1626]
gi|430604761|gb|ELB42192.1| muramidase-2 [Enterococcus faecium E2134]
gi|430616925|gb|ELB53816.1| muramidase-2 [Enterococcus faecium E2883]
gi|430638440|gb|ELB74376.1| muramidase-2 [Enterococcus faecium E2560]
gi|430644555|gb|ELB80160.1| muramidase-2 [Enterococcus faecium E6012]
gi|430644891|gb|ELB80465.1| muramidase-2 [Enterococcus faecium E6045]
gi|445189497|gb|AGE31139.1| Membrane-bound lytic murein transglycosylase D precursor
[Enterococcus faecium NRRL B-2354]
Length = 672
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
P QQ IV K S + + S +T + G+++W ++ +G+++ + E N + + I
Sbjct: 604 PGQQVIVKKGSSQSTNQQSVTGS-KTYTVKSGESVWSVADSHGITMAQLIEWNNIKNNFI 662
Query: 134 YAGKKLII 141
Y G+ LI+
Sbjct: 663 YPGQTLIV 670
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + G+++W ++ K G+++D + E N + + IY G++LI+
Sbjct: 489 TYTVKAGESVWSVANKNGITMDQLIEWNNIKNNFIYPGQQLIV 531
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|430837607|ref|ZP_19455570.1| muramidase-2 [Enterococcus faecium E0680]
gi|430840286|ref|ZP_19458214.1| muramidase-2 [Enterococcus faecium E0688]
gi|430859230|ref|ZP_19476843.1| muramidase-2 [Enterococcus faecium E1552]
gi|430487186|gb|ELA63953.1| muramidase-2 [Enterococcus faecium E0680]
gi|430489839|gb|ELA66411.1| muramidase-2 [Enterococcus faecium E0688]
gi|430543974|gb|ELA84024.1| muramidase-2 [Enterococcus faecium E1552]
Length = 672
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 54 NRNETTQPQPIAEST--QPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGL 111
N++ T Q I + P QQ IV K S + + S +T + G+++W +
Sbjct: 582 NKHHITMDQLIEWNNIKNNFIYPGQQVIVKKGSSQSTNQQSVTGS-KTYTVKSGESVWSV 640
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ +G+++ + E N + + IY G+ LI+
Sbjct: 641 ADSHGITMAQLIEWNNIKNNFIYPGQTLIV 670
Score = 35.4 bits (80), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + G+++W ++ K G+++D + E N + + IY G++LI+
Sbjct: 489 TYTVKAGESVWSVANKNGITMDQLIEWNNIKNNFIYPGQQLIV 531
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|430824549|ref|ZP_19443104.1| muramidase-2 [Enterococcus faecium E0120]
gi|430868479|ref|ZP_19482809.1| muramidase-2 [Enterococcus faecium E1574]
gi|431744344|ref|ZP_19533214.1| muramidase-2 [Enterococcus faecium E2071]
gi|430440988|gb|ELA51137.1| muramidase-2 [Enterococcus faecium E0120]
gi|430549144|gb|ELA88989.1| muramidase-2 [Enterococcus faecium E1574]
gi|430605511|gb|ELB42908.1| muramidase-2 [Enterococcus faecium E2071]
Length = 672
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 38.9 bits (89), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 54 NRNETTQPQPIAEST--QPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGL 111
N++ T Q I + P QQ IV K S + + S +T + GD++W +
Sbjct: 582 NKHHITMDQLIEWNNIKNNFIYPGQQVIVKKGSSQSTNQQSVTGS-KTYTVKSGDSVWSV 640
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ +G+++ + E N + + IY G+ LI+
Sbjct: 641 ADSHGITMAQLIEWNNIKNNFIYPGQTLIV 670
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + G+++W ++ K G+++D + E N + + IY G++LI+
Sbjct: 489 TYTVKAGESVWSVANKNGITMDQLIEWNNIKNNFIYPGQQLIV 531
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|424957243|ref|ZP_18371980.1| muramidase-2 [Enterococcus faecium R446]
gi|402944040|gb|EJX62488.1| muramidase-2 [Enterococcus faecium R446]
Length = 672
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 74 PPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTI 133
P QQ IV K S K++ +T + G+++W ++ +G+++ + E N + + I
Sbjct: 604 PGQQVIVKKGS-SQSKNQQSVTGSKTYTVKSGESVWSVADSHGITMAQLIEWNNIKNNFI 662
Query: 134 YAGKKLII 141
Y G+ LI+
Sbjct: 663 YPGQTLIV 670
Score = 35.4 bits (80), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + G+++W ++ K G+++D + E N + + IY G++LI+
Sbjct: 489 TYTVKAGESVWSVANKNGITMDQLIEWNNIKNNFIYPGQQLIV 531
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|163759443|ref|ZP_02166528.1| lipoprotein precursor protein [Hoeflea phototrophica DFL-43]
gi|162283040|gb|EDQ33326.1| lipoprotein precursor protein [Hoeflea phototrophica DFL-43]
Length = 635
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ GDTL ++R +GVS+DA+K AN L G I G+ L IP
Sbjct: 411 SVASGDTLTKIARNHGVSVDALKAANDLKGSNIRIGQTLSIP 452
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
Query: 60 QPQPIAESTQPIQPPPQQP-IVTKPSICTEKSEPEPASCRTVEIVR-----GDTLWGLSR 113
+PQ + S QP Q V P S P+ A T R G+T++ LS+
Sbjct: 231 RPQNLTASVQPASVYKQNADQVLAPDPIVTGSAPKGAGWTTAGATRITLGPGETIYNLSK 290
Query: 114 KYGVSIDAIKEANGLS-GDTIYAGKKLIIP 142
+YGV I +AN ++ + AG++L+IP
Sbjct: 291 RYGVPASEIMKANNIADASKVSAGRQLLIP 320
>gi|304391790|ref|ZP_07373732.1| peptidase M23B [Ahrensia sp. R2A130]
gi|303296019|gb|EFL90377.1| peptidase M23B [Ahrensia sp. R2A130]
Length = 523
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
A+ +VE+ RG+TL+ LSR++GV + A+ AN + + D + AG ++ IP
Sbjct: 198 ATAASVELKRGETLYNLSRRFGVPVSALMTANNIKNADDVQAGTRINIP 246
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+V GDTL+ ++ K+G S+ I+ AN ++ + G++L+IP
Sbjct: 318 VVSGDTLYAIALKHGKSVADIQTANNMTTTNVRLGQRLVIP 358
>gi|428160969|gb|AFY97801.1| lipoprotein, partial [Bartonella quintana]
Length = 153
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%), Gaps = 2/51 (3%)
Query: 94 PASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLS-GDTIYAGKKLIIP 142
P R IV+ GDTL ++R+ G+S++A+K ANG+S ++IY G+ L+IP
Sbjct: 13 PLFRRNSYIVQSGDTLLSIARQIGISVEALKLANGISNNNSIYIGQVLMIP 63
>gi|424972884|ref|ZP_18386194.1| gametolysin family protein, partial [Enterococcus faecium P1139]
gi|424984865|ref|ZP_18397379.1| gametolysin family protein, partial [Enterococcus faecium ERV69]
gi|425045155|ref|ZP_18449271.1| gametolysin family protein, partial [Enterococcus faecium 510]
gi|402951987|gb|EJX69849.1| gametolysin family protein, partial [Enterococcus faecium P1139]
gi|402967624|gb|EJX84161.1| gametolysin family protein, partial [Enterococcus faecium ERV69]
gi|403027753|gb|EJY39623.1| gametolysin family protein, partial [Enterococcus faecium 510]
Length = 596
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + G+++W ++ K G+++D + E N + + IY G++LI+
Sbjct: 489 TYTVKAGESVWSVANKNGITMDQLIEWNNIKNNFIYPGQQLIV 531
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|391231142|ref|ZP_10267348.1| LysM domain-containing protein [Opitutaceae bacterium TAV1]
gi|391220803|gb|EIP99223.1| LysM domain-containing protein [Opitutaceae bacterium TAV1]
Length = 264
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 100 VEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ +VR GDTL ++ +YGV++ A+++ N L+GD I G+KL+IP
Sbjct: 34 MHVVRKGDTLSAIAARYGVTVAALRQRNRLTGDVIKVGQKLVIP 77
>gi|372276516|ref|ZP_09512552.1| N-acetylmuramoyl-L-alanine amidase [Pantoea sp. SL1_M5]
Length = 556
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RG+TL G++ KYGVS+ ++E N L D ++ G++L +P
Sbjct: 453 VTRGETLSGIAAKYGVSMATLREMNTLKRDVVWVGQRLKVP 493
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++V GD+L G++ YGVS AI + N L + G+ L IP
Sbjct: 513 KVVVGDSLTGIAAHYGVSPKAIMQTNNLKSTNVMLGQNLKIP 554
>gi|335430280|ref|ZP_08557175.1| stage II sporulation protein D [Haloplasma contractile SSD-17B]
gi|334888696|gb|EGM26993.1| stage II sporulation protein D [Haloplasma contractile SSD-17B]
Length = 674
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 30/43 (69%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T E+ GDTL+ ++R+YG++I+ +K N L D IY G+ LI+
Sbjct: 250 THEVEPGDTLYDIARQYGITINHLKSMNNLERDAIYPGELLIV 292
Score = 40.4 bits (93), Expect = 0.21, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 29/47 (61%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+ + T + GDTL G++ ++G +++ +K N L+GD IY G+ L
Sbjct: 144 QTVTASTYSVRSGDTLSGIANRFGTTVNDLKALNNLTGDRIYIGQTL 190
Score = 36.2 bits (82), Expect = 4.4, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T ++ G+TL G++ +Y +++D + N LS D IY G+ L
Sbjct: 100 THQVQYGETLSGIASRYNLTVDEVMMLNNLSSDRIYEGQSL 140
Score = 36.2 bits (82), Expect = 4.9, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 96 SCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S +T V+ GDTL ++ +Y +S + +K N L GDTIY G+ L
Sbjct: 196 SHKTTHTVKSGDTLSEIALRYEISTNELKRINNLLGDTIYEGQVL 240
>gi|314953917|ref|ZP_07856775.1| LysM domain protein [Enterococcus faecium TX0133A]
gi|313594116|gb|EFR72961.1| LysM domain protein [Enterococcus faecium TX0133A]
Length = 593
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 54 NRNETTQPQPIAEST--QPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGL 111
N+N T Q I + P QQ IV K S + + S +T + G+++W +
Sbjct: 503 NKNGITMDQLIEWNNIKNNFIYPGQQVIVKKGSSQSTNQQSVTGS-KTYTVKSGESVWSV 561
Query: 112 SRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ +G+++ + E N + + IY G+ LI+
Sbjct: 562 ADSHGITMAQLIEWNNIKNNFIYPGQTLIV 591
Score = 35.4 bits (80), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|146299714|ref|YP_001194305.1| NLP/P60 protein [Flavobacterium johnsoniae UW101]
gi|146154132|gb|ABQ04986.1| NLP/P60 protein; peptidase family C40 [Flavobacterium johnsoniae
UW101]
Length = 384
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEAN-GLSGDTIYAGKKLIIP 142
E+++ +TLWG+S+KY VS+D +K+AN L + + G++++IP
Sbjct: 95 EVLQKETLWGISKKYNVSVDDLKKANPALETEGLKIGQQIVIP 137
>gi|431766579|ref|ZP_19555055.1| muramidase-2 [Enterococcus faecium E4215]
gi|430626073|gb|ELB62665.1| muramidase-2 [Enterococcus faecium E4215]
Length = 577
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + G+++W ++ K G+++D + E N + + IY G++LI+
Sbjct: 489 TYTVKAGESVWSVANKNGITMDQLIEWNNIKNNFIYPGQQLIV 531
Score = 35.0 bits (79), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|182414449|ref|YP_001819515.1| peptidoglycan-binding LysM [Opitutus terrae PB90-1]
gi|177841663|gb|ACB75915.1| Peptidoglycan-binding LysM [Opitutus terrae PB90-1]
Length = 302
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
T +VRGD+LW +++K+ S+ I AN L + T+ G+KLIIP
Sbjct: 109 TYTVVRGDSLWTIAKKHHSSVGEIAAANNLRTSATVRVGQKLIIP 153
>gi|110801710|ref|YP_699489.1| lysM domain-containing protein [Clostridium perfringens SM101]
gi|110682211|gb|ABG85581.1| lysM domain protein [Clostridium perfringens SM101]
Length = 520
Score = 44.7 bits (104), Expect = 0.013, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLS-GDTIYAGKKLIIP 142
AS + +GDTLW L++KY +ID + + N + D+IY G K++IP
Sbjct: 467 ASITIYTVQKGDTLWDLAKKYKTTIDTLVKLNDIEDADSIYVGDKIMIP 515
>gi|119385453|ref|YP_916509.1| peptidase M23B [Paracoccus denitrificans PD1222]
gi|119375220|gb|ABL70813.1| peptidase M23B [Paracoccus denitrificans PD1222]
Length = 389
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 75 PQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGD-TI 133
P P + T ++ P + + + G+T W ++RKY VS++ + + NGL+ D T+
Sbjct: 147 PNVPAASGAGAVTSQTLPAASQPKQHVVAAGETAWSIARKYNVSVNDLAQWNGLTQDMTL 206
Query: 134 YAGKKLIIP 142
G++L+IP
Sbjct: 207 RTGQRLLIP 215
>gi|424962311|ref|ZP_18376674.1| gametolysin family protein, partial [Enterococcus faecium P1986]
gi|425017394|ref|ZP_18427899.1| gametolysin family protein, partial [Enterococcus faecium C621]
gi|425023987|ref|ZP_18434079.1| gametolysin family protein, partial [Enterococcus faecium C1904]
gi|425039264|ref|ZP_18443819.1| gametolysin family protein, partial [Enterococcus faecium 513]
gi|425061225|ref|ZP_18464477.1| gametolysin family protein, partial [Enterococcus faecium 503]
gi|402941060|gb|EJX59818.1| gametolysin family protein, partial [Enterococcus faecium P1986]
gi|403004412|gb|EJY18224.1| gametolysin family protein, partial [Enterococcus faecium C621]
gi|403008268|gb|EJY21788.1| gametolysin family protein, partial [Enterococcus faecium C1904]
gi|403016749|gb|EJY29546.1| gametolysin family protein, partial [Enterococcus faecium 513]
gi|403041836|gb|EJY52825.1| gametolysin family protein, partial [Enterococcus faecium 503]
Length = 596
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 35.4 bits (80), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + G+++W ++ K G+++D + E N + + IY G++LI+
Sbjct: 489 TYTVKAGESVWSVANKNGITMDQLIEWNNIKNNFIYPGQQLIV 531
Score = 35.0 bits (79), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|311031083|ref|ZP_07709173.1| cell wall hydrolase SleB [Bacillus sp. m3-13]
Length = 342
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 32/42 (76%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+++ GDTL+ +S K+ V++ +I++ N L+ DTI G++LIIP
Sbjct: 165 KVITGDTLFSISEKFNVTVGSIQKENNLTTDTIRIGQQLIIP 206
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GDTL+ L++KYGVS+ +KE NGL D I G+ L
Sbjct: 64 GDTLFSLAQKYGVSVKELKELNGLKSDIIIVGQIL 98
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 67 STQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEAN 126
+T I+ Q I T EKS+ E + + G+TLWG+++K+ +S+ IK+ N
Sbjct: 193 TTDTIRIGQQLIIPTSNHHEVEKSQ-EKVTKAFYTVAPGETLWGIAKKFNMSVHKIKKDN 251
Query: 127 GLSGDTIYAGKKLII 141
+S + + G++L I
Sbjct: 252 HMSSEFVLIGQELKI 266
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
E+ GDTL+ +++KYG+S+ +K+ N L D I G+ L
Sbjct: 117 EVSSGDTLFSIAKKYGLSVLELKQVNNLKTDLIKVGQVL 155
>gi|229916898|ref|YP_002885544.1| NLP/P60 protein [Exiguobacterium sp. AT1b]
gi|229468327|gb|ACQ70099.1| NLP/P60 protein [Exiguobacterium sp. AT1b]
Length = 590
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T + GDTLW +SR Y VS+ IK N LS D+I G+KL
Sbjct: 31 THTVRSGDTLWSISRYYDVSVATIKSLNNLSSDSIRVGQKL 71
>gi|407797049|ref|ZP_11143997.1| hypothetical protein MJ3_09083 [Salimicrobium sp. MJ3]
gi|407018523|gb|EKE31247.1| hypothetical protein MJ3_09083 [Salimicrobium sp. MJ3]
Length = 269
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
+++S LK+ N L+ N + P Q V+ S ++ S + + T
Sbjct: 44 VSVSQLKSWNNLSSN----------------LIFPNQSLTVSGQSTASDSSSNQASESNT 87
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GDT++ + +K+G S+ IK N LS + I+ G +L +
Sbjct: 88 YTVKSGDTIYSIGKKHGASVSQIKSWNNLSSNLIHPGDQLAV 129
>gi|154090277|emb|CAL25593.1| nlpD protein [Bartonella henselae]
gi|154090279|emb|CAL25594.1| nlpD protein [Bartonella henselae]
Length = 177
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL ++R+ GVS++A+K NG+ ++IY G+ L+IP
Sbjct: 74 GDTLLSIARQRGVSVEALKLVNGIRSNSIYIGQVLMIP 111
>gi|338210197|ref|YP_004654244.1| lytic transglycosylase [Runella slithyformis DSM 19594]
gi|336304010|gb|AEI47112.1| Lytic transglycosylase catalytic [Runella slithyformis DSM 19594]
Length = 724
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 77 QPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAG 136
Q + +P T +P+ + +V+G+T++ +S+KYGV +D IKE NGL + G
Sbjct: 657 QKLTIRPVGNTLSQQPKADEFVSHTVVQGETMFSISKKYGVKMDEIKEWNGLPDTGVKIG 716
Query: 137 KKLII 141
++L I
Sbjct: 717 QQLKI 721
>gi|33867497|gb|AAQ55118.1| NlpD [Bartonella henselae]
Length = 164
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL ++R+ GVS++A+K NG+ ++IY G+ L+IP
Sbjct: 68 GDTLLSIARQRGVSVEALKLVNGIRSNSIYIGQVLMIP 105
>gi|398309999|ref|ZP_10513473.1| gamma-D-glutamate-meso-diaminopimelate muropeptidase, partial
[Bacillus mojavensis RO-H-1]
Length = 238
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+T +I + PA T+++ GD+LW L++ Y S+ AI AN LS + G+ L
Sbjct: 9 LTATAIVSSTLAITPAEAATIKVKSGDSLWKLAQTYNTSVAAISSANHLSTTVLSIGQTL 68
Query: 140 IIP 142
IP
Sbjct: 69 TIP 71
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 104 RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LW ++ +Y +S+ +K+ NGLS D I AG+KL
Sbjct: 97 NGDSLWLIANEYKMSVQELKKLNGLSSDMIRAGQKL 132
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
A T ++ GD+LW ++ K +SI +K N L DTIY + L
Sbjct: 158 AKTGTYKVQLGDSLWKIANKVNMSIAELKVLNNLKSDTIYVNQVL 202
>gi|304316299|ref|YP_003851444.1| peptidoglycan-binding lysin domain [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777801|gb|ADL68360.1| Peptidoglycan-binding lysin domain [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 134
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRK---YGVSIDAIKEANGLSGDTIYAG 136
V K ++ S P+ RT + +GDTLW ++ K G IKE NGL+ DTIY G
Sbjct: 68 VAKENLVIVNSIPDNKGNRTYTVQKGDTLWRIAEKELGRGTRYPEIKELNGLTSDTIYPG 127
Query: 137 KKLIIP 142
+ L +P
Sbjct: 128 QVLKLP 133
>gi|386714485|ref|YP_006180808.1| hypothetical protein HBHAL_3189 [Halobacillus halophilus DSM 2266]
gi|384074041|emb|CCG45534.1| conserved hypothetical protein [Halobacillus halophilus DSM 2266]
Length = 264
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S I +GDTLWG+S+KY VS++ +K N L+ + IY ++L +
Sbjct: 23 SAEEYTIDKGDTLWGISKKYDVSVNQLKSWNDLNSNIIYPNQQLTV 68
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 19/100 (19%)
Query: 40 IAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRT 99
++++ LK+ N LN N I P QQ V+K + + + A T
Sbjct: 44 VSVNQLKSWNDLNSN----------------IIYPNQQLTVSKETSSSSEKSSNDA---T 84
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
+ GDTL+ +S KYG+S+D + + N L I+ G K
Sbjct: 85 YTVKSGDTLYKISNKYGISVDDLMDWNNLDSTLIHPGDKF 124
>gi|406591970|ref|YP_006739150.1| lysM domain-containing protein [Chlamydia psittaci CP3]
gi|406594448|ref|YP_006741303.1| lysM domain-containing protein [Chlamydia psittaci MN]
gi|410858134|ref|YP_006974074.1| putative exported protein [Chlamydia psittaci 01DC12]
gi|405782880|gb|AFS21628.1| lysM domain protein [Chlamydia psittaci MN]
gi|405787842|gb|AFS26585.1| lysM domain protein [Chlamydia psittaci CP3]
gi|410811029|emb|CCO01672.1| putative exported protein [Chlamydia psittaci 01DC12]
Length = 361
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 9/74 (12%)
Query: 77 QPIVTKPSICTEKSEPEPASCRTVE--------IVRGDTLWGLSRKYGVSIDAIKEANGL 128
IV P C K++ + A C T E I GD+LW ++R++GV+I+ I N L
Sbjct: 285 HRIVETPRSCIVKAK-QTAECLTEEKTVYEDYVIQEGDSLWLIARRFGVTIEEIMRVNHL 343
Query: 129 SGDTIYAGKKLIIP 142
S + GK L +P
Sbjct: 344 SHHRLLPGKHLKLP 357
>gi|119953406|ref|YP_945615.1| autolysin [Borrelia turicatae 91E135]
gi|119862177|gb|AAX17945.1| autolysin [Borrelia turicatae 91E135]
Length = 689
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E+V+GDTL+ +S KY + I +K AN L + I G+ L+IP
Sbjct: 50 EVVKGDTLYSISLKYKIPIKELKSANNLKSEHIRVGRILVIP 91
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
G+TL+ ++RKYGV ++ +K N L+G++I+ ++L I
Sbjct: 294 GETLYSIARKYGVLLEDLKSWNNLNGNSIFHNQELKI 330
>gi|433461841|ref|ZP_20419441.1| hypothetical protein D479_09696 [Halobacillus sp. BAB-2008]
gi|432189618|gb|ELK46708.1| hypothetical protein D479_09696 [Halobacillus sp. BAB-2008]
Length = 264
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S V + +GDTLW +S+ GVS++ IK ANGL+ + I+ + L +
Sbjct: 23 SAEEVTVNKGDTLWSISQANGVSVEDIKAANGLTSNLIFPDQNLSV 68
>gi|424997198|ref|ZP_18408964.1| gametolysin family protein, partial [Enterococcus faecium ERV165]
gi|425010445|ref|ZP_18421395.1| gametolysin family protein, partial [Enterococcus faecium E422]
gi|402986663|gb|EJY01776.1| gametolysin family protein, partial [Enterococcus faecium ERV165]
gi|402999962|gb|EJY14122.1| gametolysin family protein, partial [Enterococcus faecium E422]
Length = 517
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|257094606|ref|YP_003168247.1| lytic transglycosylase subunit [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047130|gb|ACV36318.1| Lytic transglycosylase catalytic [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 767
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 59/116 (50%), Gaps = 14/116 (12%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQP------IQPPPQQPIVTKPSICTE---- 88
G+ ++ L+A+N +N R + Q + + Q + P+QP+ + E
Sbjct: 372 GMTLANLRAVNGIN-GRIRVSAGQTLLVAAQEGAEVADLAALPEQPLAAETQRIAETAPR 430
Query: 89 --KSEPEPA-SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
K EP P + RT + +G+TL GL+++YG+++ +K+ N L D + G +L +
Sbjct: 431 LPKVEPTPVVTTRTHTVAKGETLPGLAQRYGMTLAELKQMNKLRADRLAPGLRLTV 486
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 93 EPASC-RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
EPAS R + +G+TL+ ++++YG+S+ +K+ N L D I AG +L +
Sbjct: 598 EPASATRMHTVAKGETLFSVAQRYGMSMSELKQVNRLRVDQINAGTRLAV 647
>gi|218290919|ref|ZP_03494976.1| Peptidoglycan-binding LysM [Alicyclobacillus acidocaldarius LAA1]
gi|218239084|gb|EED06287.1| Peptidoglycan-binding LysM [Alicyclobacillus acidocaldarius LAA1]
Length = 355
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD+LW +S +GVS+ AI+ AN L+ IY G++L+I
Sbjct: 184 GDSLWEISNIFGVSVSAIRSANHLTQTAIYPGERLVI 220
>gi|406661920|ref|ZP_11070029.1| Membrane-bound lytic murein transglycosylase D precursor [Cecembia
lonarensis LW9]
gi|405554179|gb|EKB49292.1| Membrane-bound lytic murein transglycosylase D precursor [Cecembia
lonarensis LW9]
Length = 649
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 48/80 (60%), Gaps = 6/80 (7%)
Query: 66 ESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR----GDTLWGLSRKYGVSIDA 121
ES P++ P +P+ +PS +E+ EP A T +V G+TL+ LS+ YGVS++
Sbjct: 500 ESNPPVRTP--EPVREQPSTRSERPEPVSAPSTTEPLVHRVAPGETLFRLSQNYGVSVEN 557
Query: 122 IKEANGLSGDTIYAGKKLII 141
+++ N L +TI G+++ I
Sbjct: 558 LRKWNNLPDNTIKVGQEIQI 577
Score = 40.4 bits (93), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ G+TL+ LS+ YGVS+D IK N L +TI G+K+ I
Sbjct: 607 VAAGETLFRLSQNYGVSVDDIKRWNNLPDNTIQVGQKIRI 646
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 24/111 (21%)
Query: 22 DGREAAVAKT-AGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIV 80
DG +AA T AGF G+ + + LN LN+N P++
Sbjct: 326 DGIKAATTTTQAGFAEKIGLKTNKFRKLNDLNRN----------------------DPVI 363
Query: 81 TKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGD 131
+K + V ++ G+TLW +S+KYG+ + A+K N + D
Sbjct: 364 AGQYYYLDKKGAKAEVANHV-VMPGETLWSISQKYGIRLAALKAKNRIRTD 413
>gi|414153786|ref|ZP_11410108.1| Cell wall hydrolase SleB [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
gi|411454807|emb|CCO08012.1| Cell wall hydrolase SleB [Desulfotomaculum hydrothermale Lam5 = DSM
18033]
Length = 276
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 81 TKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLI 140
KP++ P++ TV+ GD+L+ +++KY ++A+ AN LSG IY G++LI
Sbjct: 75 VKPAVAALPPAKSPSTAYTVK--PGDSLYLIAQKYNTRVEALMLANSLSGTLIYPGQQLI 132
Query: 141 IP 142
+P
Sbjct: 133 LP 134
Score = 38.5 bits (88), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ GD+L+ +S+K G+ + I+ AN L+GD I+ G+ L +P
Sbjct: 33 VAAGDSLYLISQKTGIPVSKIRAANNLTGDLIFPGQVLSLP 73
>gi|403235757|ref|ZP_10914343.1| Endopeptidase [Bacillus sp. 10403023]
Length = 439
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S T + GDTL+G++++Y +++ +K+ N L+GD IY G+ L+I
Sbjct: 91 SVATHTVANGDTLYGIAKQYNLTVSQLKQLNHLTGDMIYPGQTLVI 136
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 92 PEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
P P + T + RGDTL+ ++ Y +S+D +K+ N L+ +TI G+ L
Sbjct: 140 PPPQTTATYTVTRGDTLYSIANSYNMSVDQLKQLNNLTSNTIQVGQTL 187
Score = 37.0 bits (84), Expect = 2.4, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
T + + + T + GDTL+G++R Y +S+ +K AN L+ +T+ G+ L
Sbjct: 248 TPSTPQQNVASATYTVKAGDTLYGIARTYNMSVTDLKNANNLTSNTLSVGQVL 300
>gi|303256780|ref|ZP_07342794.1| transglycosylase SLT/LysM domain protein [Burkholderiales bacterium
1_1_47]
gi|302860271|gb|EFL83348.1| transglycosylase SLT/LysM domain protein [Burkholderiales bacterium
1_1_47]
Length = 568
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS + + +GDTL+ ++ +YG++ A++ AN +SG+ I G++L I
Sbjct: 444 ASTKFYVVRKGDTLYSIANRYGITASALRNANNISGNNISVGQRLTI 490
>gi|158520711|ref|YP_001528581.1| lytic transglycosylase catalytic subunit [Desulfococcus oleovorans
Hxd3]
gi|158509537|gb|ABW66504.1| Lytic transglycosylase catalytic [Desulfococcus oleovorans Hxd3]
Length = 595
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 88 EKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
EK+ PAS R + G++LW L+ +Y +++AI+ NGLSG ++ G+ L IP
Sbjct: 485 EKASEIPASHR---VRSGESLWILANRYSTTVNAIQRLNGLSGTSLRVGQVLKIP 536
>gi|430854245|ref|ZP_19471963.1| muramidase-2, partial [Enterococcus faecium E1258]
gi|430539263|gb|ELA79521.1| muramidase-2, partial [Enterococcus faecium E1258]
Length = 537
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 35.0 bits (79), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 28/43 (65%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + G+++W ++ K G+++D + E N + + IY G++LI+
Sbjct: 489 TYTVKAGESVWSVANKNGITMDQLIEWNNIKNNFIYPGQQLIV 531
>gi|424733106|ref|ZP_18161675.1| putative gametolysin, partial [Enterococcus faecalis ERV81]
gi|424760897|ref|ZP_18188485.1| putative gametolysin, partial [Enterococcus faecalis R508]
gi|402392214|gb|EJV25480.1| putative gametolysin, partial [Enterococcus faecalis ERV81]
gi|402402748|gb|EJV35447.1| putative gametolysin, partial [Enterococcus faecalis R508]
Length = 519
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 472
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 368 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
>gi|329895361|ref|ZP_08270986.1| N-acetylmuramoyl-L-alanine amidase [gamma proteobacterium IMCC3088]
gi|328922374|gb|EGG29718.1| N-acetylmuramoyl-L-alanine amidase [gamma proteobacterium IMCC3088]
Length = 433
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 98 RTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+T I RGDTL G+++K+ VS+++++ N ++G I G+ L+IP
Sbjct: 387 QTYTIARGDTLSGIAQKFKVSVESLRSHNNINGSRILVGQTLVIP 431
>gi|89096968|ref|ZP_01169859.1| hypothetical protein B14911_18725 [Bacillus sp. NRRL B-14911]
gi|89088348|gb|EAR67458.1| hypothetical protein B14911_18725 [Bacillus sp. NRRL B-14911]
Length = 304
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
E+ GDTLW LS+ + AIK+ N L+ D IY G+KL IP
Sbjct: 48 EVKSGDTLWKLSQSFSSDAAAIKKVNRLATDRIYTGQKLRIP 89
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ RGDTLW +S Y + + +K+ NGL + G+KL +P
Sbjct: 3 DVKRGDTLWRISEIYKTTTEELKKINGLQTSLLLPGQKLRVP 44
>gi|425058870|ref|ZP_18462234.1| gametolysin family protein, partial [Enterococcus faecium 504]
gi|403037202|gb|EJY48508.1| gametolysin family protein, partial [Enterococcus faecium 504]
Length = 516
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD++W +S KYG+++ + + N + + IY G++L +
Sbjct: 418 GDSVWSVSNKYGITMAQLIQWNNIQNNFIYPGQQLTV 454
>gi|262163597|ref|ZP_06031340.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Vibrio mimicus
VM223]
gi|262027964|gb|EEY46626.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Vibrio mimicus
VM223]
Length = 584
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R ++ RG+ L ++ +Y VSID+I++AN L D + G++LIIP
Sbjct: 537 LRKHKVQRGEHLSKIAEQYNVSIDSIRQANQLRSDQLAVGQQLIIP 582
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 58/142 (40%), Gaps = 15/142 (10%)
Query: 1 MQSPEDSVPTPRVPAENDGSGDGREAAVAKTAGFVVFS-GIAISILKALNPLNKNRNETT 59
+Q ED+ P + A N G + ++ G + G+++ L +N L +
Sbjct: 401 VQYFEDNPPEGTLFA-NRGKAQKHKVQRGESVGLIANQYGVSVDALMKVNKLKSSTLAIG 459
Query: 60 QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSI 119
Q I S PI P E + P T + GD L L+ Y VS+
Sbjct: 460 QLLTIPASQAPIPVP-------------EVTNPVETETVTHVVKSGDFLGKLASTYKVSV 506
Query: 120 DAIKEANGLSGDTIYAGKKLII 141
AIK+ N L DT+ G+KL I
Sbjct: 507 AAIKKENNLKSDTLVLGQKLKI 528
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ RG+++ ++ +YGVS+DA+ + N L T+ G+ L IP
Sbjct: 424 KVQRGESVGLIANQYGVSVDALMKVNKLKSSTLAIGQLLTIP 465
>gi|258625639|ref|ZP_05720520.1| N-acetylmuramoyl-L-alanine amidase [Vibrio mimicus VM603]
gi|258582094|gb|EEW06962.1| N-acetylmuramoyl-L-alanine amidase [Vibrio mimicus VM603]
Length = 584
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R ++ RG+ L ++ +Y VSID+I++AN L D + G++LIIP
Sbjct: 537 LRKHKVQRGEHLSKIAEQYNVSIDSIRQANQLRSDQLAVGQQLIIP 582
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 58/142 (40%), Gaps = 15/142 (10%)
Query: 1 MQSPEDSVPTPRVPAENDGSGDGREAAVAKTAGFVVFS-GIAISILKALNPLNKNRNETT 59
+Q ED+ P + A N G + ++ G + G+++ L +N L +
Sbjct: 401 VQYFEDNPPEGTLFA-NRGKAQKHKVQRGESVGLIANQYGVSVDALMKVNKLKSSTLAIG 459
Query: 60 QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSI 119
Q I S PI P E + P T + GD L L+ Y VS+
Sbjct: 460 QLLTIPASQAPIPVP-------------EVTNPVETETVTHVVKSGDFLGKLASTYKVSV 506
Query: 120 DAIKEANGLSGDTIYAGKKLII 141
AIK+ N L DT+ G+KL I
Sbjct: 507 AAIKKENNLKSDTLMLGQKLKI 528
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ RG+++ ++ +YGVS+DA+ + N L T+ G+ L IP
Sbjct: 424 KVQRGESVGLIANQYGVSVDALMKVNKLKSSTLAIGQLLTIP 465
>gi|424991115|ref|ZP_18403287.1| putative muramidase-2, partial [Enterococcus faecium ERV26]
gi|402977607|gb|EJX93409.1| putative muramidase-2, partial [Enterococcus faecium ERV26]
Length = 442
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
A+ T + GD++WG+S K+G+++D + + N + + IY G+KL I
Sbjct: 252 ATSTTYTVQSGDSVWGISNKFGITMDQLIQWNNIQNNFIYPGQKLTI 298
>gi|427394138|ref|ZP_18887640.1| hypothetical protein HMPREF9698_01275, partial [Alloiococcus otitis
ATCC 51267]
gi|425730126|gb|EKU92969.1| hypothetical protein HMPREF9698_01275, partial [Alloiococcus otitis
ATCC 51267]
Length = 278
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 33/51 (64%)
Query: 91 EPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+P+ A+ T + GDTL+ ++R++G S+ +K NGL+ D I G++L +
Sbjct: 227 KPQKANRSTYTVKAGDTLYHIARQHGTSVANLKALNGLTSDLILVGQELRV 277
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+PAS +T + GDTL+ + +++ +S+ +K+ N L+GD I+ G+ L +
Sbjct: 96 QPAS-QTYTVKPGDTLYKIGQEHNLSVAQLKDLNQLTGDLIHPGQVLRV 143
>gi|312904999|ref|ZP_07764134.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis TX0635]
gi|310631695|gb|EFQ14978.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Enterococcus faecalis TX0635]
Length = 512
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 433 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 368 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
>gi|422694327|ref|ZP_16752319.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis TX4244]
gi|315148155|gb|EFT92171.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Enterococcus faecalis TX4244]
Length = 517
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
I GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 433 IKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 368 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
>gi|254478688|ref|ZP_05092059.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
gi|214035375|gb|EEB76078.1| LysM domain protein [Carboxydibrachium pacificum DSM 12653]
Length = 155
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 97 CRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGD--TIYAGKKLIIP 142
CRT+ VR GD+LW ++ +GVS+D + +AN D IY G+++ IP
Sbjct: 48 CRTIYTVRPGDSLWSIANMFGVSLDCLIKANPQISDPNLIYPGQQICIP 96
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 92 PEPASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLSGD--TIYAGKKLIIP 142
P P +CRT+ + GD+LW ++ +GVS++A+ +AN D IY G+++ IP
Sbjct: 102 PSPQTCRTIYTAKAGDSLWSIANMFGVSLEALIKANPQIPDPNLIYPGQQICIP 155
>gi|307296178|ref|ZP_07576007.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis TX0411]
gi|306496109|gb|EFM65690.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Enterococcus faecalis TX0411]
Length = 433
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 368 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
>gi|258623496|ref|ZP_05718498.1| N-acetylmuramoyl-L-alanine amidase [Vibrio mimicus VM573]
gi|258584208|gb|EEW08955.1| N-acetylmuramoyl-L-alanine amidase [Vibrio mimicus VM573]
Length = 584
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R ++ RG+ L ++ +Y VSID+I++AN L D + G++LIIP
Sbjct: 537 LRKHKVQRGEHLSKIAEQYNVSIDSIRQANQLRSDQLAVGQQLIIP 582
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 58/142 (40%), Gaps = 15/142 (10%)
Query: 1 MQSPEDSVPTPRVPAENDGSGDGREAAVAKTAGFVVFS-GIAISILKALNPLNKNRNETT 59
+Q ED+ P + A N G + ++ G + G+++ L +N L +
Sbjct: 401 VQYFEDNPPEGTLFA-NRGKAQKHKVQRGESVGLIANQYGVSVDALMKVNKLKSSTLAIG 459
Query: 60 QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSI 119
Q I S PI P E + P T + GD L L+ Y VS+
Sbjct: 460 QLLTIPASQAPIPVP-------------EVTNPVETETVTHVVKSGDFLGKLASTYKVSV 506
Query: 120 DAIKEANGLSGDTIYAGKKLII 141
AIK+ N L DT+ G+KL I
Sbjct: 507 AAIKKENNLKSDTLVLGQKLKI 528
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ RG+++ ++ +YGVS+DA+ + N L T+ G+ L IP
Sbjct: 424 KVQRGESVGLIANQYGVSVDALMKVNKLKSSTLAIGQLLTIP 465
>gi|256617684|ref|ZP_05474530.1| LOW QUALITY PROTEIN: cell wall hydrolase, partial [Enterococcus
faecalis ATCC 4200]
gi|256597211|gb|EEU16387.1| LOW QUALITY PROTEIN: cell wall hydrolase [Enterococcus faecalis
ATCC 4200]
Length = 405
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 365 VKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
>gi|414084590|ref|YP_006993298.1| lysM domain-containing protein [Carnobacterium maltaromaticum
LMA28]
gi|412998174|emb|CCO11983.1| lysM domain protein [Carnobacterium maltaromaticum LMA28]
Length = 330
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 32/47 (68%)
Query: 91 EPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGK 137
+ + + T ++ +G+T+W +++ YG++I +KE N + DT+YAG+
Sbjct: 5 DAQAENSETHKVQKGETVWRIAKSYGITIAELKEWNDMESDTVYAGQ 51
>gi|262172558|ref|ZP_06040236.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Vibrio mimicus
MB-451]
gi|449143467|ref|ZP_21774293.1| N-acetylmuramoyl-L-alanine amidase [Vibrio mimicus CAIM 602]
gi|261893634|gb|EEY39620.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Vibrio mimicus
MB-451]
gi|449080868|gb|EMB51776.1| N-acetylmuramoyl-L-alanine amidase [Vibrio mimicus CAIM 602]
Length = 575
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R ++ RG+ L ++ +Y VSID+I++AN L D + G++LIIP
Sbjct: 528 LRKHKVQRGEHLSKIAEQYNVSIDSIRQANQLRSDQLAVGQQLIIP 573
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 58/142 (40%), Gaps = 15/142 (10%)
Query: 1 MQSPEDSVPTPRVPAENDGSGDGREAAVAKTAGFVVFS-GIAISILKALNPLNKNRNETT 59
+Q ED+ P + A N G + ++ G + G+++ L +N L +
Sbjct: 392 VQYFEDNPPEGTLFA-NRGKAQKHKVQRGESVGLIANQYGVSVDALMKVNKLKSSTLAIG 450
Query: 60 QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSI 119
Q I S PI P E + P T + GD L L+ Y VS+
Sbjct: 451 QLLTIPASQAPIPVP-------------EVTNPVETETVTHVVKSGDFLGKLASTYKVSV 497
Query: 120 DAIKEANGLSGDTIYAGKKLII 141
AIK+ N L DT+ G+KL I
Sbjct: 498 AAIKKENNLKSDTLVLGQKLKI 519
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ RG+++ ++ +YGVS+DA+ + N L T+ G+ L IP
Sbjct: 415 KVQRGESVGLIANQYGVSVDALMKVNKLKSSTLAIGQLLTIP 456
>gi|262401564|ref|ZP_06078131.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Vibrio sp.
RC586]
gi|262352279|gb|EEZ01408.1| N-acetylmuramoyl-L-alanine amidase AmiB precursor [Vibrio sp.
RC586]
Length = 469
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R ++ RG+ L ++ +Y VSID+I++AN L D + G++LIIP
Sbjct: 422 LRKHKVQRGEYLSKIADQYNVSIDSIRQANQLRSDQLLVGQQLIIP 467
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ RG+++ ++ +YGVS+DA+K+AN L TI G+ L IP
Sbjct: 309 KVQRGESIGLIANQYGVSVDALKQANQLKSSTITVGQWLTIP 350
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
S P T + GD L LS Y VS+ +IK+ N L DT+ G+KL I
Sbjct: 362 SNPVETETITHVVKSGDFLGKLSSTYKVSVASIKKENNLKSDTLVLGQKLKI 413
>gi|381187523|ref|ZP_09895086.1| hemagglutinin [Flavobacterium frigoris PS1]
gi|379650269|gb|EIA08841.1| hemagglutinin [Flavobacterium frigoris PS1]
Length = 294
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 29/38 (76%)
Query: 104 RGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+GDTL+ +SRK+ + +D +K+ N LS +T+ G+KLI+
Sbjct: 256 KGDTLYSISRKFNLVVDQLKQKNKLSANTLSIGQKLIV 293
>gi|424811016|ref|ZP_18236347.1| N-acetylmuramoyl-L-alanine amidase [Vibrio mimicus SX-4]
gi|342321898|gb|EGU17695.1| N-acetylmuramoyl-L-alanine amidase [Vibrio mimicus SX-4]
Length = 575
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R ++ RG+ L ++ +Y VSID+I++AN L D + G++LIIP
Sbjct: 528 LRKHKVQRGEHLSKIAEQYNVSIDSIRQANQLRSDQLAVGQQLIIP 573
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 58/142 (40%), Gaps = 15/142 (10%)
Query: 1 MQSPEDSVPTPRVPAENDGSGDGREAAVAKTAGFVVFS-GIAISILKALNPLNKNRNETT 59
+Q ED+ P + A N G + ++ G + G+++ L +N L +
Sbjct: 392 VQYFEDNPPEGTLFA-NRGKAQKHKVQRGESVGLIANQYGVSVDALMKVNKLKSSTLAIG 450
Query: 60 QPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSI 119
Q I S PI P E + P T + GD L L+ Y VS+
Sbjct: 451 QLLTIPASQAPIPVP-------------EVTNPVETETVTHVVKSGDFLGKLASTYKVSV 497
Query: 120 DAIKEANGLSGDTIYAGKKLII 141
AIK+ N L DT+ G+KL I
Sbjct: 498 AAIKKENNLKSDTLVLGQKLKI 519
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ RG+++ ++ +YGVS+DA+ + N L T+ G+ L IP
Sbjct: 415 KVQRGESVGLIANQYGVSVDALMKVNKLKSSTLAIGQLLTIP 456
>gi|251798856|ref|YP_003013587.1| hypothetical protein Pjdr2_4889 [Paenibacillus sp. JDR-2]
gi|247546482|gb|ACT03501.1| 3D domain protein [Paenibacillus sp. JDR-2]
Length = 218
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANG-LSGDTIYAGKKLIIP 142
A+ ++ V GDT W LS+KY VS+D + +AN + IYAG K++IP
Sbjct: 25 AASKSHTAVEGDTFWKLSQKYSVSVDKLMKANAKIDPMNIYAGLKIVIP 73
>gi|320334825|ref|YP_004171536.1| peptidase M23 [Deinococcus maricopensis DSM 21211]
gi|319756114|gb|ADV67871.1| Peptidase M23 [Deinococcus maricopensis DSM 21211]
Length = 363
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
A+ T + GDTL+ ++ + GVS+DA++ AN L GDTI G+ L +P
Sbjct: 18 AAAGTYTVQPGDTLYRIATRAGVSVDALRAANDLPGDTISVGQTLKLP 65
>gi|88801421|ref|ZP_01116949.1| hemagglutinin [Polaribacter irgensii 23-P]
gi|88782079|gb|EAR13256.1| hemagglutinin [Polaribacter irgensii 23-P]
Length = 278
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
EI +GDTL+ +S+K+ +S+ A+K N LS +TI G++L I
Sbjct: 235 YEIRKGDTLYAISKKFKISVAALKATNNLSDNTIEIGQRLFI 276
>gi|378581307|ref|ZP_09829955.1| N-acetylmuramoyl-l-alanine amidase II [Pantoea stewartii subsp.
stewartii DC283]
gi|377816042|gb|EHT99149.1| N-acetylmuramoyl-l-alanine amidase II [Pantoea stewartii subsp.
stewartii DC283]
Length = 558
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 66 ESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEA 125
E +P+ P + + P T +++ A R + RG+TL G++ KYGVS+ +++
Sbjct: 420 EENRPLGSSPAVSVASNP--ATGETQYTGAVQRHT-VTRGETLSGIAAKYGVSMATLRQM 476
Query: 126 NGLSGDTIYAGKKLIIP 142
N L D ++ G++L +P
Sbjct: 477 NTLKRDVVWVGQRLKVP 493
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 24/116 (20%)
Query: 32 AGFVVFSGIAISILKALNPLNKNRNETTQ-----PQPIAESTQPIQPPPQQPIVTKPSIC 86
+G G++++ L+ +N L ++ Q +A T P P++PI K
Sbjct: 460 SGIAAKYGVSMATLRQMNTLKRDVVWVGQRLKVPASAVASRTTPAATTPRRPIRHK---- 515
Query: 87 TEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+VRGD+L ++ YGVS +I +AN L + G+ L IP
Sbjct: 516 ---------------VVRGDSLSSIAAHYGVSPKSILQANNLKSTNVMLGQNLKIP 556
>gi|331700878|ref|YP_004397837.1| peptidoglycan-binding lysin domain-containing protein
[Lactobacillus buchneri NRRL B-30929]
gi|406026391|ref|YP_006725223.1| peptidoglycan-binding protein [Lactobacillus buchneri CD034]
gi|329128221|gb|AEB72774.1| Peptidoglycan-binding lysin domain protein [Lactobacillus buchneri
NRRL B-30929]
gi|405124880|gb|AFR99640.1| peptidoglycan-binding protein [Lactobacillus buchneri CD034]
Length = 204
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 95 ASCRTVEIVR-GDTLWGLSRKYGVSIDAIKEANGLS-GDTIYAGKKLIIP 142
AS TV V+ GDT+WG+S++Y S+ AI+ AN L + I G++L IP
Sbjct: 26 ASASTVVTVKSGDTVWGISQQYNSSVKAIESANNLQDANVIQVGQQLTIP 75
>gi|326803838|ref|YP_004321656.1| gametolysin [Aerococcus urinae ACS-120-V-Col10a]
gi|326651366|gb|AEA01549.1| gametolysin [Aerococcus urinae ACS-120-V-Col10a]
Length = 573
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 90 SEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++P ++ ++ + GD LW +++ G +I+A+K ANGL+ + IY G+ L P
Sbjct: 291 AKPAQSAKQSYRVQAGDGLWTVAKNLGTTIEAVKAANGLTSNFIYPGQVLYAP 343
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Query: 64 IAESTQPIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVR-GDTLWGLSRKYGVSIDAI 122
IA++ P + K + ++ S P +VR GD LW ++R+ G SI+A+
Sbjct: 190 IAKNNLSQYDTPGKTFSNKQTNSSQVSTPTAQPGGRSYVVRPGDGLWTVARQLGTSIEAV 249
Query: 123 KEANGLSGDTIYAGKKLI 140
K ANGLS + IY G+ L
Sbjct: 250 KLANGLSSNLIYPGQVLY 267
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 76 QQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYA 135
+P PS + + ++ GDTL+ ++R G++++ +KE NGL+ + IY
Sbjct: 420 HKPSNNSPSANNPRPSHNGSQAGVYQVQAGDTLYRIARNQGLTVNQLKEMNGLTSNAIYV 479
Query: 136 GKKL 139
G+KL
Sbjct: 480 GQKL 483
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 43/102 (42%), Gaps = 12/102 (11%)
Query: 39 GIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPE---PA 95
G I +KA N L N Q + P Q+ P + + + A
Sbjct: 317 GTTIEAVKAANGLTSN---------FIYPGQVLYAPGQKQNSASPVVTNTNKQSQGQSNA 367
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGK 137
++ + GD LW ++R G+++D +K GL+ + IY G+
Sbjct: 368 GYKSYTVQAGDGLWTVARHLGMTVDTLKAKYGLTSNFIYPGQ 409
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 65/139 (46%), Gaps = 17/139 (12%)
Query: 20 SGDGREAAVAKT-AGFVVF-----SGIAISILKALNPLNKNRNETTQPQPIAESTQPIQP 73
S +G +A V + AG ++ G+ ++ LK +N L N Q +A QP
Sbjct: 435 SHNGSQAGVYQVQAGDTLYRIARNQGLTVNQLKEMNGLTSNAIYVGQKLNLAAKA-AYQP 493
Query: 74 PPQQPI-----VTKPSICTEKSEPEPAS----CRTVEIVRGDTLWGLSRKYGVSIDAIKE 124
+ + + P+ + P+P S T +I GD L+ ++ +GVS++ +
Sbjct: 494 TAKSGVSASQATSAPTPSQRPASPKPVSQVQAANTYQIKAGDNLYRIALNHGVSLNQLLA 553
Query: 125 ANGLSGDT-IYAGKKLIIP 142
AN L ++ I G++L+IP
Sbjct: 554 ANQLKANSLILPGQQLVIP 572
>gi|386712599|ref|YP_006178921.1| hypothetical protein HBHAL_1267 [Halobacillus halophilus DSM 2266]
gi|386712600|ref|YP_006178922.1| hypothetical protein HBHAL_1268 [Halobacillus halophilus DSM 2266]
gi|384072154|emb|CCG43644.1| conserved hypothetical protein [Halobacillus halophilus DSM 2266]
gi|384072155|emb|CCG43645.1| conserved hypothetical protein [Halobacillus halophilus DSM 2266]
Length = 196
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 95 ASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
AS V + RGDTLWG+ ++ GVS++ +K AN LS + I+ + L I
Sbjct: 22 ASASEVVVDRGDTLWGIGQEKGVSVEQLKAANDLSSNLIFPDQTLTI 68
>gi|291297388|ref|YP_003508786.1| NLP/P60 protein [Meiothermus ruber DSM 1279]
gi|290472347|gb|ADD29766.1| NLP/P60 protein [Meiothermus ruber DSM 1279]
Length = 289
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%), Gaps = 2/47 (4%)
Query: 98 RTVE--IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
RTV+ + RGDTL+ ++R+YG ++ AI++ NGL G ++ G+ L IP
Sbjct: 66 RTVQHTVQRGDTLFSIARRYGSTVQAIQQENGLEGTSLSPGQVLRIP 112
>gi|187479407|ref|YP_787432.1| membrane-bound lytic murein transglycosylase D [Bordetella avium
197N]
gi|115423994|emb|CAJ50547.1| membrane-bound lytic murein transglycosylase D [Bordetella avium
197N]
Length = 466
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 96 SCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+ RT ++ GDTL+ L+++YG S+DA++ N L G+++ G L +P
Sbjct: 414 NVRTHKVGAGDTLFSLAKRYGTSVDALRALNNLKGNSLKIGTPLRVP 460
>gi|424678101|ref|ZP_18114945.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis ERV103]
gi|402352250|gb|EJU87102.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis ERV103]
Length = 412
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 365 VKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
>gi|424681115|ref|ZP_18117909.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis ERV116]
gi|424701349|ref|ZP_18137523.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis ERV62]
gi|402352166|gb|EJU87025.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis ERV116]
gi|402371971|gb|EJV06110.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis ERV62]
Length = 451
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 368 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
>gi|323483398|ref|ZP_08088786.1| hypothetical protein HMPREF9474_00535 [Clostridium symbiosum
WAL-14163]
gi|323691103|ref|ZP_08105383.1| peptidoglycan-binding LysM [Clostridium symbiosum WAL-14673]
gi|355627139|ref|ZP_09049075.1| hypothetical protein HMPREF1020_03154 [Clostridium sp. 7_3_54FAA]
gi|323403252|gb|EGA95562.1| hypothetical protein HMPREF9474_00535 [Clostridium symbiosum
WAL-14163]
gi|323504800|gb|EGB20582.1| peptidoglycan-binding LysM [Clostridium symbiosum WAL-14673]
gi|354820384|gb|EHF04800.1| hypothetical protein HMPREF1020_03154 [Clostridium sp. 7_3_54FAA]
Length = 517
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 15/83 (18%)
Query: 62 QPIAESTQ---PIQPPPQQPIVTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVS 118
QPI E ++P Q + P I +P GD+LW +++K+ +
Sbjct: 443 QPIREQVVTGVKVEPLDMQKLQQMPGIVGYIVQP------------GDSLWKIAKKFHTT 490
Query: 119 IDAIKEANGLSGDTIYAGKKLII 141
+D IKE NGL+ D I G KL++
Sbjct: 491 VDNIKETNGLTEDEIRPGDKLVL 513
>gi|257089226|ref|ZP_05583587.1| autolysin, partial [Enterococcus faecalis CH188]
gi|256998038|gb|EEU84558.1| autolysin [Enterococcus faecalis CH188]
Length = 436
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 365 VKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
>gi|121729704|ref|ZP_01682146.1| N-acetylmuramoyl-L-alanine amidase [Vibrio cholerae V52]
gi|121628555|gb|EAX61037.1| N-acetylmuramoyl-L-alanine amidase [Vibrio cholerae V52]
Length = 231
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
R ++ RG+ L ++ +Y VS+D+I++AN L D + G++LIIP
Sbjct: 184 LRKHKVQRGEFLSKIADQYNVSVDSIRQANQLRSDQLLVGQQLIIP 229
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ RG+++ ++ +YGVS+DA+K+AN L TI G+ L IP
Sbjct: 69 KVQRGESIGLIANQYGVSVDALKKANNLKSSTISVGQLLTIP 110
Score = 35.8 bits (81), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GD L L+ Y VS+ +IK+ N L DT+ G+KL I
Sbjct: 139 GDFLGKLATTYKVSVASIKKENNLKSDTLVLGQKLKI 175
>gi|423328070|ref|ZP_17305878.1| hypothetical protein HMPREF9711_01452 [Myroides odoratimimus CCUG
3837]
gi|404605602|gb|EKB05186.1| hypothetical protein HMPREF9711_01452 [Myroides odoratimimus CCUG
3837]
Length = 476
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+I RG++L ++ KY +I IK+AN + +TI+AGK+L IP
Sbjct: 206 QIKRGESLGAIANKYNTTITEIKKANNMKTNTIHAGKRLSIP 247
>gi|424717994|ref|ZP_18147264.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis ERV68]
gi|424755189|ref|ZP_18183075.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis ERV93]
gi|402383138|gb|EJV16754.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis ERV68]
gi|402401281|gb|EJV34064.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis ERV93]
Length = 413
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 365 VKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
>gi|373109998|ref|ZP_09524271.1| hypothetical protein HMPREF9712_01864 [Myroides odoratimimus CCUG
10230]
gi|371643811|gb|EHO09357.1| hypothetical protein HMPREF9712_01864 [Myroides odoratimimus CCUG
10230]
Length = 476
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+I RG++L ++ KY +I IK+AN + +TI+AGK+L IP
Sbjct: 206 QIKRGESLGAIANKYNTTITEIKKANNMKTNTIHAGKRLSIP 247
>gi|423131648|ref|ZP_17119323.1| hypothetical protein HMPREF9714_02723 [Myroides odoratimimus CCUG
12901]
gi|423135420|ref|ZP_17123066.1| hypothetical protein HMPREF9715_02841 [Myroides odoratimimus CIP
101113]
gi|371641585|gb|EHO07167.1| hypothetical protein HMPREF9714_02723 [Myroides odoratimimus CCUG
12901]
gi|371642409|gb|EHO07975.1| hypothetical protein HMPREF9715_02841 [Myroides odoratimimus CIP
101113]
Length = 476
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 101 EIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+I RG++L ++ KY +I IK+AN + +TI+AGK+L IP
Sbjct: 206 QIKRGESLGAIANKYNTTITEIKKANNMKTNTIHAGKRLSIP 247
>gi|312907129|ref|ZP_07766121.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis DAPTO 512]
gi|312979292|ref|ZP_07790991.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis DAPTO 516]
gi|310626840|gb|EFQ10123.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Enterococcus faecalis DAPTO 512]
gi|311287950|gb|EFQ66506.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Enterococcus faecalis DAPTO 516]
Length = 433
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 368 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
>gi|432910526|ref|XP_004078399.1| PREDICTED: lysM and putative peptidoglycan-binding
domain-containing protein 1-like [Oryzias latipes]
Length = 212
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 94 PASCRTVE--IVRGDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKLIIP 142
P R VE + GDTL GL+ KYGVS++ IK AN L + D+I+ K L IP
Sbjct: 35 PVRQRHVEHTVQSGDTLQGLALKYGVSMEQIKRANRLYTNDSIFLKKSLSIP 86
>gi|49475356|ref|YP_033397.1| lipoptrotein [Bartonella henselae str. Houston-1]
gi|19526703|gb|AAL89761.1|AF484425_2 NlpD [Bartonella henselae str. Houston-1]
gi|49238162|emb|CAF27371.1| Antigen (virulence determinant) (lipoptrotein) [Bartonella henselae
str. Houston-1]
Length = 392
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GDTL ++R+ GVS++A+K NG+ ++IY G+ L+IP
Sbjct: 139 GDTLLSIARQRGVSVEALKLVNGIRSNSIYIGQVLMIP 176
>gi|366053378|ref|ZP_09451100.1| hypothetical protein LsueK3_07646 [Lactobacillus suebicus KCTC
3549]
Length = 446
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 36/56 (64%), Gaps = 6/56 (10%)
Query: 93 EPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEAN------GLSGDTIYAGKKLIIP 142
+ A TV++ GDT+WGLS+KYGV+++ ++ +N + D IYAG+ L +P
Sbjct: 36 QTAHADTVKVKNGDTIWGLSQKYGVTVNDLETSNQNVKKISSTVDLIYAGQTLNLP 91
>gi|365925469|ref|ZP_09448232.1| Autolysin, partial [Lactobacillus mali KCTC 3596 = DSM 20444]
Length = 131
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 27/35 (77%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
GD+LW ++ KYG++++ +KE N L+ +TIY G+ L
Sbjct: 28 GDSLWAIATKYGLTVNKLKELNSLNTNTIYIGQSL 62
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 18/122 (14%)
Query: 20 SGDGREAAVAKTAGFVVFSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPI 79
SGD A K G+ ++ LK LN LN N Q I+
Sbjct: 27 SGDSLWAIATK-------YGLTVNKLKELNSLNTNTIYIGQSLKISNKATTTSSTTNSS- 78
Query: 80 VTKPSICTEKSEPEPASCRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKL 139
S TV+ GD+LW L+ KY ++ IK AN LS D IY G+ L
Sbjct: 79 --------SSSASSAKKSYTVK--SGDSLWQLAVKYNTTVTQIKSANHLSSDIIYVGQIL 128
Query: 140 II 141
I
Sbjct: 129 TI 130
>gi|424685663|ref|ZP_18122355.1| putative gametolysin, partial [Enterococcus faecalis ERV129]
gi|424722414|ref|ZP_18151474.1| putative gametolysin, partial [Enterococcus faecalis ERV72]
gi|402358125|gb|EJU92810.1| putative gametolysin, partial [Enterococcus faecalis ERV129]
gi|402388920|gb|EJV22344.1| putative gametolysin, partial [Enterococcus faecalis ERV72]
Length = 587
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+AG+K+I+
Sbjct: 504 GDTLNKIAAQYGVSVANLRSWNGISGDLIFAGQKIIV 540
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 368 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 436 GDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 472
>gi|415886745|ref|ZP_11548525.1| hypothetical protein MGA3_15426 [Bacillus methanolicus MGA3]
gi|387587432|gb|EIJ79755.1| hypothetical protein MGA3_15426 [Bacillus methanolicus MGA3]
Length = 262
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 32/43 (74%)
Query: 99 TVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
T + G++LW ++RK+G+++ +K+ N LS DTI+ G+KL+I
Sbjct: 89 TYTVKSGESLWTIARKFGMTVSELKKINKLSRDTIHPGQKLLI 131
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
G++LW +S+KY VS+ +++ N LSG IY G+KL +
Sbjct: 35 GESLWEISKKYNVSVSNLQKWNHLSGSKIYPGQKLTL 71
>gi|317051077|ref|YP_004112193.1| lytic transglycosylase catalytic [Desulfurispirillum indicum S5]
gi|316946161|gb|ADU65637.1| Lytic transglycosylase catalytic [Desulfurispirillum indicum S5]
Length = 719
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 37 FSGIAISILKALNPLNKNRNETTQPQPIAESTQPIQPPPQQPIVTKPSICTEKSEPEPAS 96
+GI+I +KALNP N P P + + P P+ T E + + S
Sbjct: 319 ITGISIDRIKALNP---ELNGYVTP-PSSSYRLKLFPGYGAPVETA---LREIPKGQRVS 371
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
++ G++L+ LSR+Y +SI+ I+ AN LSG+ + + L+IP
Sbjct: 372 WIKHQVRSGESLYVLSRRYNISIEEIRRANQLSGNLLRVNQVLLIP 417
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 27/38 (71%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
G++L LS +Y V I I++ANGL GD + AG+ LIIP
Sbjct: 627 GESLSVLSDRYNVPIRDIRQANGLRGDLLRAGQVLIIP 664
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
G++L +S +Y VS++ I+ N +SGDTI AG+ L+IP
Sbjct: 442 GESLSVISERYRVSMNEIRRNNNISGDTIRAGQTLLIP 479
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 101 EIVR-GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
+VR G++L +S +Y V+I +++AN + GD I AG+ L IP
Sbjct: 501 HVVRNGESLSTISSRYNVTIAQLRQANNIRGDIIQAGQTLNIP 543
>gi|374299532|ref|YP_005051171.1| Lytic transglycosylase catalytic [Desulfovibrio africanus str.
Walvis Bay]
gi|332552468|gb|EGJ49512.1| Lytic transglycosylase catalytic [Desulfovibrio africanus str.
Walvis Bay]
Length = 551
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
Query: 90 SEPEPASCRTVEIVR---------GDTLWGLSRKYGVSIDAIKEANGL-SGDTIYAGKKL 139
SEP PA +T I + GDTLW +++ + VS++ ++ ANGL SG + G++L
Sbjct: 423 SEPTPARAKTQAIAQKRANYVVQTGDTLWDIAQHHNVSLNTLRRANGLSSGKNLSVGQRL 482
Query: 140 IIP 142
IP
Sbjct: 483 YIP 485
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 25/38 (65%)
Query: 105 GDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
GD+ W LSR++ I +K+ N +S +T+ G+ L+IP
Sbjct: 373 GDSWWALSRRFDTPIAVLKKLNNISSNTLRPGEHLMIP 410
>gi|422732076|ref|ZP_16788422.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase, partial
[Enterococcus faecalis TX0645]
gi|315161918|gb|EFU05935.1| mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
[Enterococcus faecalis TX0645]
Length = 432
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 29/40 (72%)
Query: 102 IVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLII 141
+ GDTL ++ +YGVS+ ++ NG+SGD I+ G+KLI+
Sbjct: 365 VKSGDTLNKIAAQYGVSVANLRSWNGISGDLIFVGQKLIV 404
>gi|302343861|ref|YP_003808390.1| Lytic transglycosylase catalytic [Desulfarculus baarsii DSM 2075]
gi|301640474|gb|ADK85796.1| Lytic transglycosylase catalytic [Desulfarculus baarsii DSM 2075]
Length = 376
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 97 CRTVEIVRGDTLWGLSRKYGVSIDAIKEANGLSGDTIYAGKKLIIP 142
CR + RGD+L ++++ GVS A++ AN + GD I G++L++P
Sbjct: 329 CRYWVVKRGDSLSLIAKRLGVSAAALRRANNIHGDKIKLGQRLVVP 374
>gi|194467264|ref|ZP_03073251.1| NLP/P60 protein [Lactobacillus reuteri 100-23]
gi|194454300|gb|EDX43197.1| NLP/P60 protein [Lactobacillus reuteri 100-23]
Length = 343
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 100 VEIVRGDTLWGLSRKYGVSIDAIKEANGLSG-DTIYAGKKLI 140
V++ GDT+WG +++Y ++D+I AN L+ + IY G++L+
Sbjct: 27 VQVQSGDTVWGFAQQYATTVDSISTANQLADPNVIYVGQQLV 68
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.310 0.130 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,562,286,859
Number of Sequences: 23463169
Number of extensions: 109929894
Number of successful extensions: 434189
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2974
Number of HSP's successfully gapped in prelim test: 1465
Number of HSP's that attempted gapping in prelim test: 427089
Number of HSP's gapped (non-prelim): 8338
length of query: 142
length of database: 8,064,228,071
effective HSP length: 106
effective length of query: 36
effective length of database: 9,872,099,453
effective search space: 355395580308
effective search space used: 355395580308
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 71 (32.0 bits)