BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040226
(137 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449446618|ref|XP_004141068.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
gi|449488075|ref|XP_004157933.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
Length = 243
Score = 234 bits (596), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/134 (86%), Positives = 122/134 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|449447888|ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
gi|449521735|ref|XP_004167885.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
Length = 236
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/134 (86%), Positives = 122/134 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|224121646|ref|XP_002318635.1| predicted protein [Populus trichocarpa]
gi|222859308|gb|EEE96855.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/118 (97%), Positives = 117/118 (99%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY 118
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY 118
>gi|225444782|ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
gi|297738588|emb|CBI27833.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 233 bits (594), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 122/134 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCA+AQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|359476269|ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [Vitis vinifera]
gi|296081703|emb|CBI20708.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 122/134 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKG+RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGKRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|225442156|ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
gi|297743020|emb|CBI35887.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 232 bits (592), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 122/134 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPEN+VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|224141685|ref|XP_002324195.1| predicted protein [Populus trichocarpa]
gi|118483222|gb|ABK93514.1| unknown [Populus trichocarpa]
gi|118487214|gb|ABK95435.1| unknown [Populus trichocarpa]
gi|222865629|gb|EEF02760.1| predicted protein [Populus trichocarpa]
Length = 234
Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|224088766|ref|XP_002308530.1| predicted protein [Populus trichocarpa]
gi|118483836|gb|ABK93809.1| unknown [Populus trichocarpa]
gi|118485378|gb|ABK94546.1| unknown [Populus trichocarpa]
gi|222854506|gb|EEE92053.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|118488288|gb|ABK95963.1| unknown [Populus trichocarpa]
Length = 232
Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|224135747|ref|XP_002322150.1| predicted protein [Populus trichocarpa]
gi|222869146|gb|EEF06277.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|388494596|gb|AFK35364.1| unknown [Lotus japonicus]
gi|388504726|gb|AFK40429.1| unknown [Lotus japonicus]
Length = 237
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP++TEIIIRATRTQ VLG
Sbjct: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMKTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|356559951|ref|XP_003548259.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 236
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|356534894|ref|XP_003535986.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 236
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|217071088|gb|ACJ83904.1| unknown [Medicago truncatula]
gi|388507820|gb|AFK41976.1| unknown [Medicago truncatula]
Length = 239
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVCY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|356534900|ref|XP_003535989.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 239
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|357439691|ref|XP_003590123.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|217071466|gb|ACJ84093.1| unknown [Medicago truncatula]
gi|355479171|gb|AES60374.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|388518095|gb|AFK47109.1| unknown [Medicago truncatula]
Length = 239
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|351726176|ref|NP_001235326.1| uncharacterized protein LOC100499737 [Glycine max]
gi|255626187|gb|ACU13438.1| unknown [Glycine max]
Length = 236
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACH 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|358348478|ref|XP_003638273.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355504208|gb|AES85411.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 239
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|358248410|ref|NP_001239621.1| uncharacterized protein LOC100808705 [Glycine max]
gi|255641130|gb|ACU20843.1| unknown [Glycine max]
Length = 236
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|255638159|gb|ACU19393.1| unknown [Glycine max]
Length = 236
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVCY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|255637340|gb|ACU19000.1| unknown [Glycine max]
Length = 236
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|192910782|gb|ACF06499.1| ribosomal protein [Elaeis guineensis]
Length = 235
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 114/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFSFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|357498229|ref|XP_003619403.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|357498233|ref|XP_003619405.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355494418|gb|AES75621.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355494420|gb|AES75623.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 235
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGY+GVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYAGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|356559953|ref|XP_003548260.1| PREDICTED: 40S ribosomal protein S3-3-like [Glycine max]
Length = 235
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA+Q+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MASQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|357438107|ref|XP_003589329.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355478377|gb|AES59580.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 239
Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYK+LGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKVLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|255637525|gb|ACU19089.1| unknown [Glycine max]
Length = 239
Score = 229 bits (584), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/134 (85%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|255550145|ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223544609|gb|EEF46125.1| 40S ribosomal protein S3, putative [Ricinus communis]
Length = 234
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/134 (84%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MSTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FP+NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|388495648|gb|AFK35890.1| unknown [Lotus japonicus]
Length = 235
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 114/134 (85%), Positives = 120/134 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPV+TEIIIRATRTQ VLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVKTEIIIRATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVV KRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVSKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|297822907|ref|XP_002879336.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297325175|gb|EFH55595.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 250
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/134 (84%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|15225107|ref|NP_180719.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
gi|75206146|sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S ribosomal protein S3-1
gi|14190419|gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana]
gi|4582468|gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis
thaliana]
gi|15028253|gb|AAK76715.1| putative 40S ribosomal protein; contains C-terminal domain
[Arabidopsis thaliana]
gi|15450571|gb|AAK96463.1| At2g31610/T9H9.13 [Arabidopsis thaliana]
gi|15451084|gb|AAK96813.1| 40S ribosomal protein [Arabidopsis thaliana]
gi|20148377|gb|AAM10079.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis
thaliana]
gi|20258907|gb|AAM14147.1| putative 40S ribosomal protein [Arabidopsis thaliana]
gi|330253473|gb|AEC08567.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
Length = 250
Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 113/134 (84%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|255546003|ref|XP_002514061.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223546517|gb|EEF48015.1| 40S ribosomal protein S3, putative [Ricinus communis]
Length = 233
Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 116/135 (85%), Positives = 122/135 (90%), Gaps = 1/135 (0%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MAT QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVL
Sbjct: 1 MATAQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
GEKGRRIRELTSVVQKRFKFPENSVELYAEKVN+RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRAC 120
Query: 120 LIISQILSNKALRSC 134
+ + + + C
Sbjct: 121 YGVLRFIMESGAKGC 135
>gi|168010087|ref|XP_001757736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168036169|ref|XP_001770580.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066635|ref|XP_001785240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663171|gb|EDQ49951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678101|gb|EDQ64563.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691012|gb|EDQ77376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 228 bits (581), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 112/134 (83%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF+FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|168010855|ref|XP_001758119.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168015431|ref|XP_001760254.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168037634|ref|XP_001771308.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677397|gb|EDQ63868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688634|gb|EDQ75010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690575|gb|EDQ76941.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 230
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 112/134 (83%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF+FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFQFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|15238533|ref|NP_198403.1| 40S ribosomal protein S3-3 [Arabidopsis thaliana]
gi|75170994|sp|Q9FJA6.1|RS33_ARATH RecName: Full=40S ribosomal protein S3-3
gi|9758155|dbj|BAB08712.1| 40S ribosomal protein S3 [Arabidopsis thaliana]
gi|16604318|gb|AAL24165.1| AT5g35530/MOK9_14 [Arabidopsis thaliana]
gi|20466075|gb|AAM19959.1| AT5g35530/MOK9_14 [Arabidopsis thaliana]
gi|332006595|gb|AED93978.1| 40S ribosomal protein S3-3 [Arabidopsis thaliana]
Length = 248
Score = 227 bits (579), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 112/134 (83%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|116786147|gb|ABK23996.1| unknown [Picea sitchensis]
gi|116793880|gb|ABK26916.1| unknown [Picea sitchensis]
Length = 233
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/134 (83%), Positives = 120/134 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKK+KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKKKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|297805098|ref|XP_002870433.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297316269|gb|EFH46692.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 248
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/134 (82%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTS+VQKRF+FP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSLVQKRFRFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|297816692|ref|XP_002876229.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297322067|gb|EFH52488.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/134 (83%), Positives = 120/134 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|115473289|ref|NP_001060243.1| Os07g0608500 [Oryza sativa Japonica Group]
gi|14192875|gb|AAK55780.1|AC079038_14 Putative 40S ribosomal protein; contains C-terminal domain [Oryza
sativa]
gi|34394183|dbj|BAC84635.1| putative 40S ribosomal protein [Oryza sativa Japonica Group]
gi|50509862|dbj|BAD32034.1| putative 40S ribosomal protein [Oryza sativa Japonica Group]
gi|113611779|dbj|BAF22157.1| Os07g0608500 [Oryza sativa Japonica Group]
gi|125559132|gb|EAZ04668.1| hypothetical protein OsI_26820 [Oryza sativa Indica Group]
gi|125601033|gb|EAZ40609.1| hypothetical protein OsJ_25071 [Oryza sativa Japonica Group]
gi|215694983|dbj|BAG90174.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 233
Score = 226 bits (576), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/132 (84%), Positives = 118/132 (89%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
TQISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEK
Sbjct: 5 TQISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEK 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELTSVVQKRF FPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR +
Sbjct: 65 GRRIRELTSVVQKRFNFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGV 124
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 125 LRFVMESGAKGC 136
>gi|15232352|ref|NP_190955.1| 40S ribosomal protein S3-2 [Arabidopsis thaliana]
gi|75183568|sp|Q9M339.1|RS32_ARATH RecName: Full=40S ribosomal protein S3-2
gi|16226458|gb|AAL16173.1|AF428405_1 AT3g53870/F5K20_170 [Arabidopsis thaliana]
gi|7630007|emb|CAB88349.1| ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|14334698|gb|AAK59527.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|16323404|gb|AAL15196.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|21618068|gb|AAM67118.1| ribosomal protein S3a-like protein [Arabidopsis thaliana]
gi|332645631|gb|AEE79152.1| 40S ribosomal protein S3-2 [Arabidopsis thaliana]
Length = 249
Score = 226 bits (575), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 112/134 (83%), Positives = 120/134 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M TQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MTTQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTS+VQKRFKFP +SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|116783944|gb|ABK23152.1| unknown [Picea sitchensis]
gi|116792247|gb|ABK26290.1| unknown [Picea sitchensis]
Length = 233
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 112/134 (83%), Positives = 119/134 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA Q+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MAKQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPE +VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEGTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|302761098|ref|XP_002963971.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii]
gi|302768543|ref|XP_002967691.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii]
gi|302769059|ref|XP_002967949.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii]
gi|300164429|gb|EFJ31038.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii]
gi|300164687|gb|EFJ31296.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii]
gi|300167700|gb|EFJ34304.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii]
Length = 230
Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 111/134 (82%), Positives = 121/134 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ+VLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPE++VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFSFPESTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|222424342|dbj|BAH20127.1| AT5G35530 [Arabidopsis thaliana]
Length = 248
Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 111/134 (82%), Positives = 120/134 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRI ELTS+VQKRFKFP++SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIGELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|226508400|ref|NP_001142180.1| uncharacterized protein LOC100274348 [Zea mays]
gi|194707500|gb|ACF87834.1| unknown [Zea mays]
gi|413921204|gb|AFW61136.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 133
Score = 224 bits (572), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 112/121 (92%), Positives = 117/121 (96%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRY L
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRYNL 120
Query: 121 I 121
I
Sbjct: 121 I 121
>gi|302761842|ref|XP_002964343.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii]
gi|300168072|gb|EFJ34676.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii]
Length = 236
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/122 (90%), Positives = 118/122 (96%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQ+VLG
Sbjct: 1 MATQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPE++VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR +
Sbjct: 61 EKGRRIRELTSVVQKRFSFPESTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVLY 120
Query: 121 II 122
+
Sbjct: 121 FV 122
>gi|82623397|gb|ABB87113.1| unknown [Solanum tuberosum]
Length = 238
Score = 223 bits (569), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/135 (85%), Positives = 120/135 (88%), Gaps = 1/135 (0%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MAT QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVL
Sbjct: 1 MATPQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
GEKGRRIRELTSVVQKRF F ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 GEKGRRIRELTSVVQKRFNFKENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRAC 120
Query: 120 LIISQILSNKALRSC 134
+ + + + C
Sbjct: 121 YGVLRFVMESGAKGC 135
>gi|223947579|gb|ACN27873.1| unknown [Zea mays]
gi|413917292|gb|AFW57224.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 127
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/118 (93%), Positives = 115/118 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY 118
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRRY
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRY 118
>gi|115453877|ref|NP_001050539.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|38093738|gb|AAR10854.1| putative ribosomal protein [Oryza sativa Japonica Group]
gi|108709465|gb|ABF97260.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
gi|113549010|dbj|BAF12453.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|125544608|gb|EAY90747.1| hypothetical protein OsI_12347 [Oryza sativa Indica Group]
gi|125586911|gb|EAZ27575.1| hypothetical protein OsJ_11524 [Oryza sativa Japonica Group]
gi|215686413|dbj|BAG87698.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708682|dbj|BAG93951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 228
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/134 (82%), Positives = 119/134 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|357144865|ref|XP_003573440.1| PREDICTED: 40S ribosomal protein S3-3-like [Brachypodium
distachyon]
Length = 227
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/134 (82%), Positives = 119/134 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|326493582|dbj|BAJ85252.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510059|dbj|BAJ87246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/134 (82%), Positives = 119/134 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|242080689|ref|XP_002445113.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
gi|241941463|gb|EES14608.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
Length = 228
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/134 (82%), Positives = 119/134 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|413921201|gb|AFW61133.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/134 (82%), Positives = 119/134 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|413921202|gb|AFW61134.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 265
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/134 (82%), Positives = 119/134 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|226495937|ref|NP_001149150.1| LOC100282772 [Zea mays]
gi|195625100|gb|ACG34380.1| 40S ribosomal protein S3 [Zea mays]
gi|223947389|gb|ACN27778.1| unknown [Zea mays]
gi|223972753|gb|ACN30564.1| unknown [Zea mays]
gi|413917290|gb|AFW57222.1| 40S ribosomal protein S3 [Zea mays]
Length = 229
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/134 (82%), Positives = 119/134 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRYVMESGAKGC 134
>gi|413917291|gb|AFW57223.1| hypothetical protein ZEAMMB73_370294 [Zea mays]
Length = 196
Score = 221 bits (564), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/134 (82%), Positives = 119/134 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRYVMESGAKGC 134
>gi|83283961|gb|ABC01888.1| 40S ribosomal protein-like protein [Solanum tuberosum]
Length = 240
Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 113/118 (95%), Positives = 114/118 (96%), Gaps = 1/118 (0%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MAT QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVL
Sbjct: 1 MATPQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
GEKGRRIR LTSVVQKRF F ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 GEKGRRIRSLTSVVQKRFNFKENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 118
>gi|195637410|gb|ACG38173.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 221 bits (563), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 109/117 (93%), Positives = 114/117 (97%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRR 117
>gi|223942381|gb|ACN25274.1| unknown [Zea mays]
gi|413921203|gb|AFW61135.1| hypothetical protein ZEAMMB73_998294 [Zea mays]
Length = 148
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 110/134 (82%), Positives = 119/134 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPEN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|74272607|gb|ABA01099.1| 40S ribosomal protein S3 [Chlamydomonas incerta]
Length = 230
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/134 (81%), Positives = 119/134 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FP +SVELYAEKV++RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPPDSVELYAEKVSDRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|242050848|ref|XP_002463168.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor]
gi|241926545|gb|EER99689.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor]
Length = 232
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/130 (83%), Positives = 115/130 (88%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEKGR
Sbjct: 7 ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTSVVQKRF FPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR + +
Sbjct: 67 RIRELTSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 127 FVMESGAKGC 136
>gi|212723988|ref|NP_001132637.1| hypothetical protein [Zea mays]
gi|194694962|gb|ACF81565.1| unknown [Zea mays]
gi|414887551|tpg|DAA63565.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
gi|414887552|tpg|DAA63566.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
Length = 232
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/130 (83%), Positives = 115/130 (88%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEKGR
Sbjct: 7 ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTSVVQKRF FPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR + +
Sbjct: 67 RIRELTSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 127 FVMESGAKGC 136
>gi|414887550|tpg|DAA63564.1| TPA: hypothetical protein ZEAMMB73_179327 [Zea mays]
Length = 198
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/130 (83%), Positives = 115/130 (88%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVFFAELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEKGR
Sbjct: 7 ISKKRKFVADGVFFAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTSVVQKRF FPE VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR + +
Sbjct: 67 RIRELTSVVQKRFNFPEGGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 126
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 127 FVMESGAKGC 136
>gi|384247377|gb|EIE20864.1| putative 40S ribosomal protein S3, partial [Coccomyxa
subellipsoidea C-169]
Length = 217
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/134 (81%), Positives = 117/134 (87%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVF+AELNE+ TRELAE GYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATAISKKRKFVADGVFYAELNELFTRELAEHGYSGVEVRVTPLRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
KGRRIRELT+VVQKRFKFPENSVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 VKGRRIRELTAVVQKRFKFPENSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMENGAKGC 134
>gi|159483497|ref|XP_001699797.1| ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Chlamydomonas reinhardtii]
gi|158281739|gb|EDP07493.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
Length = 230
Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 108/134 (80%), Positives = 118/134 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MAVQISKKRKFVQDGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FP +SVELYAEKV++RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPPDSVELYAEKVSDRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|313103630|pdb|3IZ6|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|22204124|gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum]
Length = 227
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/134 (81%), Positives = 118/134 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK+KFV+DGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQISKKKKFVSDGVFYAELNEMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF F EN VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFLENGVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|12847921|dbj|BAB27761.1| unnamed protein product [Mus musculus]
Length = 243
Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 114/134 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE+LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEILTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|392877392|gb|AFM87528.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 114/134 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + ++ + C
Sbjct: 121 GVLRFITESGAKGC 134
>gi|303276783|ref|XP_003057685.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460342|gb|EEH57636.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 232
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 116/134 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF+AELNE+L RELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MSAQISKKRKFVADGVFYAELNEMLVRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTS+VQKRF F E SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSLVQKRFGFAEGSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMENGAKGC 134
>gi|90991377|dbj|BAE93070.1| ribosomal protein S3 [Lethenteron camtschaticum]
Length = 240
Score = 214 bits (544), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 114/134 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKK+KFVADGVF AE+NE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQMSKKKKFVADGVFKAEMNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSV+QKRF FPE SVELYAEKV NRGLCAIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVIQKRFNFPEGSVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|197632571|gb|ACH71009.1| ribosomal protein S3-2 [Salmo salar]
gi|209732816|gb|ACI67277.1| 40S ribosomal protein S3 [Salmo salar]
gi|223647360|gb|ACN10438.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/134 (80%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + R C
Sbjct: 121 GVLRFIMESGSRGC 134
>gi|392881646|gb|AFM89655.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 108/134 (80%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|28630346|gb|AAN77894.1| ribosomal protein S3 [Petromyzon marinus]
Length = 206
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 114/134 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKK+KFVADGVF AE+NE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQMSKKKKFVADGVFKAEMNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSV+QKRF FPE SVELYAEKV NRGLCAIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVIQKRFNFPEGSVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|148684443|gb|EDL16390.1| ribosomal protein S3, isoform CRA_e [Mus musculus]
Length = 243
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|296217041|ref|XP_002754860.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Callithrix
jacchus]
gi|390470016|ref|XP_003734218.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Callithrix
jacchus]
gi|390470018|ref|XP_003734219.1| PREDICTED: 40S ribosomal protein S3-like isoform 3 [Callithrix
jacchus]
gi|390470020|ref|XP_003734220.1| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Callithrix
jacchus]
Length = 243
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 114/134 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + + C
Sbjct: 121 GVLRFIMESSAKGC 134
>gi|417409029|gb|JAA51041.1| Putative 40s ribosomal protein s3, partial [Desmodus rotundus]
Length = 251
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 9 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 68
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 69 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 128
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 129 GVLRFIMESGAKGC 142
>gi|308802702|ref|XP_003078664.1| Putative 40S ribosomal protein; contains C-terminal domain (ISS)
[Ostreococcus tauri]
gi|116057117|emb|CAL51544.1| Putative 40S ribosomal protein; contains C-terminal domain (ISS)
[Ostreococcus tauri]
Length = 120
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/119 (88%), Positives = 112/119 (94%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVRVTP+RTEIIIRATRT NVLG
Sbjct: 1 MATNISKKRKFVADGVFFAELNEMLVRELAEDGYSGVEVRVTPMRTEIIIRATRTANVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
EKGRRIRELT++VQ+RF F E +VELYAEKVNNRGLCAIAQ ESLRYKLLGGLAVRRY+
Sbjct: 61 EKGRRIRELTTLVQRRFGFAEGTVELYAEKVNNRGLCAIAQCESLRYKLLGGLAVRRYV 119
>gi|348522975|ref|XP_003448999.1| PREDICTED: 40S ribosomal protein S3-like [Oreochromis niloticus]
Length = 245
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|392873614|gb|AFM85639.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|12848978|dbj|BAB28159.1| unnamed protein product [Mus musculus]
Length = 243
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|6755372|ref|NP_036182.1| 40S ribosomal protein S3 [Mus musculus]
gi|57164151|ref|NP_001009239.1| 40S ribosomal protein S3 [Rattus norvegicus]
gi|57102362|ref|XP_534008.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Canis lupus
familiaris]
gi|149719291|ref|XP_001494894.1| PREDICTED: 40S ribosomal protein S3-like [Equus caballus]
gi|291384249|ref|XP_002708735.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus]
gi|301759004|ref|XP_002915347.1| PREDICTED: 40S ribosomal protein S3-like [Ailuropoda melanoleuca]
gi|344296780|ref|XP_003420081.1| PREDICTED: 40S ribosomal protein S3-like [Loxodonta africana]
gi|348555219|ref|XP_003463421.1| PREDICTED: 40S ribosomal protein S3-like [Cavia porcellus]
gi|410972647|ref|XP_003992770.1| PREDICTED: 40S ribosomal protein S3 [Felis catus]
gi|51703302|sp|P62909.1|RS3_RAT RecName: Full=40S ribosomal protein S3
gi|51703309|sp|P62908.1|RS3_MOUSE RecName: Full=40S ribosomal protein S3
gi|325530283|sp|E2RH47.1|RS3_CANFA RecName: Full=40S ribosomal protein S3
gi|57728|emb|CAA35916.1| unnamed protein product [Rattus rattus]
gi|439522|emb|CAA54167.1| ribosomal protein S3 [Mus musculus]
gi|12833687|dbj|BAB22624.1| unnamed protein product [Mus musculus]
gi|12846127|dbj|BAB27042.1| unnamed protein product [Mus musculus]
gi|12848850|dbj|BAB28111.1| unnamed protein product [Mus musculus]
gi|14715107|gb|AAH10721.1| Ribosomal protein S3 [Mus musculus]
gi|15421127|gb|AAK95377.1| ribosomal protein S3 [Mus musculus]
gi|26341816|dbj|BAC34570.1| unnamed protein product [Mus musculus]
gi|56970487|gb|AAH88450.1| Ribosomal protein S3 [Rattus norvegicus]
gi|74137630|dbj|BAE35844.1| unnamed protein product [Mus musculus]
gi|74138495|dbj|BAE38059.1| unnamed protein product [Mus musculus]
gi|74146996|dbj|BAE27438.1| unnamed protein product [Mus musculus]
gi|74177801|dbj|BAE38991.1| unnamed protein product [Mus musculus]
gi|74190989|dbj|BAE39337.1| unnamed protein product [Mus musculus]
gi|74191087|dbj|BAE39379.1| unnamed protein product [Mus musculus]
gi|74195112|dbj|BAE28299.1| unnamed protein product [Mus musculus]
gi|74197190|dbj|BAE35140.1| unnamed protein product [Mus musculus]
gi|74211022|dbj|BAE37615.1| unnamed protein product [Mus musculus]
gi|74223053|dbj|BAE40668.1| unnamed protein product [Mus musculus]
gi|148684445|gb|EDL16392.1| ribosomal protein S3, isoform CRA_g [Mus musculus]
gi|149068850|gb|EDM18402.1| rCG40478, isoform CRA_l [Rattus norvegicus]
gi|327239238|gb|AEA39486.1| ribosomal protein S3 [Ailuropoda melanoleuca]
gi|327239330|gb|AEA39532.1| ribosomal protein S3 [Ailuropoda melanoleuca]
gi|431838442|gb|ELK00374.1| 40S ribosomal protein S3 [Pteropus alecto]
gi|444731541|gb|ELW71894.1| 40S ribosomal protein S3 [Tupaia chinensis]
Length = 243
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|351696964|gb|EHA99882.1| 40S ribosomal protein S3 [Heterocephalus glaber]
Length = 243
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|392873496|gb|AFM85580.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|328683380|emb|CBL52984.1| ribosomal protein S3 [Plecoglossus altivelis]
Length = 245
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 114/134 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGTVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|15718687|ref|NP_000996.2| 40S ribosomal protein S3 isoform 1 [Homo sapiens]
gi|77404290|ref|NP_001029219.1| 40S ribosomal protein S3 [Bos taurus]
gi|113205854|ref|NP_001038066.1| 40S ribosomal protein S3 [Sus scrofa]
gi|293331917|ref|NP_001168943.1| uncharacterized protein LOC100382757 [Zea mays]
gi|354622982|ref|NP_001238928.1| 40S ribosomal protein S3 [Pan troglodytes]
gi|378548190|ref|NP_001243731.1| 40S ribosomal protein S3 isoform 1 [Homo sapiens]
gi|388453034|ref|NP_001253219.1| 40S ribosomal protein S3 [Macaca mulatta]
gi|395814830|ref|XP_003780943.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Otolemur garnettii]
gi|395814832|ref|XP_003780944.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Otolemur garnettii]
gi|395814834|ref|XP_003780945.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Otolemur garnettii]
gi|395814836|ref|XP_003780946.1| PREDICTED: 40S ribosomal protein S3 isoform 4 [Otolemur garnettii]
gi|397487317|ref|XP_003814749.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Pan paniscus]
gi|397487319|ref|XP_003814750.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Pan paniscus]
gi|402894681|ref|XP_003910477.1| PREDICTED: 40S ribosomal protein S3 [Papio anubis]
gi|403262289|ref|XP_003923526.1| PREDICTED: 40S ribosomal protein S3 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403262291|ref|XP_003923527.1| PREDICTED: 40S ribosomal protein S3 isoform 2 [Saimiri boliviensis
boliviensis]
gi|403262293|ref|XP_003923528.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Saimiri boliviensis
boliviensis]
gi|426245151|ref|XP_004016377.1| PREDICTED: 40S ribosomal protein S3 [Ovis aries]
gi|417719|sp|P23396.2|RS3_HUMAN RecName: Full=40S ribosomal protein S3
gi|91207641|sp|Q3T169.1|RS3_BOVIN RecName: Full=40S ribosomal protein S3
gi|115502828|sp|Q0Z8U2.1|RS3_PIG RecName: Full=40S ribosomal protein S3
gi|187609257|pdb|2ZKQ|CC Chain c, Structure Of A Mammalian Ribosomal 40s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
gi|555941|gb|AAB60336.1| ribosomal protein S3 [Homo sapiens]
gi|555943|gb|AAB60337.1| ribosomal protein S3 [Homo sapiens]
gi|555945|gb|AAB60338.1| ribosomal protein S3 [Homo sapiens]
gi|13111933|gb|AAH03137.1| Ribosomal protein S3 [Homo sapiens]
gi|17932970|dbj|BAB79476.1| ribosomal protein S3 [Homo sapiens]
gi|21707655|gb|AAH34149.1| Ribosomal protein S3 [Homo sapiens]
gi|48734761|gb|AAH71917.1| Ribosomal protein S3 [Homo sapiens]
gi|54781367|gb|AAV40835.1| ribosomal protein S3 [Homo sapiens]
gi|72679750|gb|AAI00285.1| Ribosomal protein S3 [Homo sapiens]
gi|74268226|gb|AAI02091.1| Ribosomal protein S3 [Bos taurus]
gi|110006645|gb|ABG48767.1| ribosomal protein S3 [Sus scrofa]
gi|119595369|gb|EAW74963.1| ribosomal protein S3 [Homo sapiens]
gi|123987601|gb|ABM83814.1| ribosomal protein S3 [synthetic construct]
gi|123999104|gb|ABM87135.1| ribosomal protein S3 [synthetic construct]
gi|189053630|dbj|BAG35882.1| unnamed protein product [Homo sapiens]
gi|208967330|dbj|BAG73679.1| ribosomal protein S3 [synthetic construct]
gi|223973891|gb|ACN31133.1| unknown [Zea mays]
gi|296479794|tpg|DAA21909.1| TPA: 40S ribosomal protein S3 [Bos taurus]
gi|387542628|gb|AFJ71941.1| 40S ribosomal protein S3 [Macaca mulatta]
gi|440899677|gb|ELR50946.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 243
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|209733852|gb|ACI67795.1| 40S ribosomal protein S3 [Salmo salar]
Length = 250
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 6 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 65
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 66 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 125
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 126 GVLRFIMESGSKGC 139
>gi|126327841|ref|XP_001362617.1| PREDICTED: 40S ribosomal protein S3-like [Monodelphis domestica]
Length = 243
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|392873570|gb|AFM85617.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392873790|gb|AFM85727.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874028|gb|AFM85846.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874738|gb|AFM86201.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392874910|gb|AFM86287.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392875972|gb|AFM86818.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876244|gb|AFM86954.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876330|gb|AFM86997.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876834|gb|AFM87249.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392879612|gb|AFM88638.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881068|gb|AFM89366.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881436|gb|AFM89550.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392882158|gb|AFM89911.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392882756|gb|AFM90210.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392884244|gb|AFM90954.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|350537143|ref|NP_001232278.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128026|gb|ACH44524.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128027|gb|ACH44525.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128028|gb|ACH44526.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128029|gb|ACH44527.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|449284051|gb|EMC90633.1| 40S ribosomal protein S3 [Columba livia]
Length = 243
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|90080277|dbj|BAE89620.1| unnamed protein product [Macaca fascicularis]
Length = 243
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|327281458|ref|XP_003225465.1| PREDICTED: 40S ribosomal protein S3-like [Anolis carolinensis]
Length = 243
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|392878050|gb|AFM87857.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|71895095|ref|NP_001026007.1| 40S ribosomal protein S3 [Gallus gallus]
gi|53133686|emb|CAG32172.1| hypothetical protein RCJMB04_19g1 [Gallus gallus]
Length = 244
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|392873640|gb|AFM85652.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|60652571|gb|AAX28980.1| ribosomal protein S3 [synthetic construct]
Length = 244
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|392873892|gb|AFM85778.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|392877878|gb|AFM87771.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|223646682|gb|ACN10099.1| 40S ribosomal protein S3 [Salmo salar]
gi|223672531|gb|ACN12447.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGSKGC 134
>gi|392875182|gb|AFM86423.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876076|gb|AFM86870.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392876116|gb|AFM86890.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392877034|gb|AFM87349.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392877852|gb|AFM87758.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878058|gb|AFM87861.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878198|gb|AFM87931.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392878664|gb|AFM88164.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392880050|gb|AFM88857.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392880832|gb|AFM89248.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881218|gb|AFM89441.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881252|gb|AFM89458.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392881368|gb|AFM89516.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
gi|392883684|gb|AFM90674.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|155369251|ref|NP_001094409.1| 40S ribosomal protein S3-A [Xenopus laevis]
gi|133940|sp|P02350.2|RS31_XENLA RecName: Full=40S ribosomal protein S3-A; AltName: Full=S1A
gi|65091|emb|CAA40592.1| ribosomal protein S1a [Xenopus laevis]
gi|27769401|gb|AAH42230.1| Ribosomal protein S1a protein [Xenopus laevis]
Length = 246
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|392876674|gb|AFM87169.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|70909551|emb|CAJ17197.1| ribosomal protein S3e [Scarabaeus laticollis]
Length = 241
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT +SKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATSVSKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPE+SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|27735393|gb|AAH41299.1| Rpls3-b protein [Xenopus laevis]
gi|213626632|gb|AAI69756.1| Rpls3-b protein [Xenopus laevis]
gi|213627669|gb|AAI69758.1| Rpls3-b protein [Xenopus laevis]
Length = 246
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|326531446|dbj|BAJ97727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 230
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/134 (77%), Positives = 115/134 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF AELNE+LTREL EDG++GVE+RVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MALQISKKRKFVADGVFLAELNEMLTRELGEDGFAGVEIRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FP+ VELYAEKV NRGLCA+AQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFPDGGVELYAEKVLNRGLCAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|45360887|ref|NP_989119.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
gi|38512247|gb|AAH61265.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
gi|89271265|emb|CAJ82962.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
Length = 246
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|148684446|gb|EDL16393.1| ribosomal protein S3, isoform CRA_h [Mus musculus]
Length = 223
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|387018380|gb|AFJ51308.1| 40S ribosomal protein S3-like [Crotalus adamanteus]
Length = 243
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEASVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|302829332|ref|XP_002946233.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
gi|300269048|gb|EFJ53228.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
Length = 1596
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 108/134 (80%), Positives = 118/134 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF+AELNE+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1367 MAVQISKKRKFVADGVFYAELNELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 1426
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FP +SVELYAEKV +RGLCA+AQAESLRYKLLGGLAVRR
Sbjct: 1427 EKGRRIRELTSVVQKRFNFPADSVELYAEKVLDRGLCAVAQAESLRYKLLGGLAVRRACY 1486
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 1487 GVLRFVMESGAKGC 1500
>gi|149068848|gb|EDM18400.1| rCG40478, isoform CRA_j [Rattus norvegicus]
Length = 277
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|149068849|gb|EDM18401.1| rCG40478, isoform CRA_k [Rattus norvegicus]
Length = 201
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|392875060|gb|AFM86362.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRARY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|2500399|sp|P79891.1|RS3_AMBME RecName: Full=40S ribosomal protein S3
gi|1836060|gb|AAB46849.1| ribosomal protein S3 [Ambystoma mexicanum]
Length = 253
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGSKGC 134
>gi|148684442|gb|EDL16389.1| ribosomal protein S3, isoform CRA_d [Mus musculus]
Length = 251
Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|225707598|gb|ACO09645.1| 40S ribosomal protein S3 [Osmerus mordax]
Length = 245
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|124300789|dbj|BAF45890.1| ribosomal protein S3 [Solea senegalensis]
Length = 245
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|156408429|ref|XP_001641859.1| predicted protein [Nematostella vectensis]
gi|156228999|gb|EDO49796.1| predicted protein [Nematostella vectensis]
Length = 240
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP+RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGLFKAELNEFLTRELAEDGYSGVEVRVTPIRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFGFPEGSVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|432889332|ref|XP_004075224.1| PREDICTED: 40S ribosomal protein S3-like [Oryzias latipes]
Length = 245
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|295314928|gb|ADF97614.1| ribosomal protein S3B [Hypophthalmichthys molitrix]
Length = 245
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|47211107|emb|CAF94963.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|149068847|gb|EDM18399.1| rCG40478, isoform CRA_i [Rattus norvegicus]
Length = 189
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|7765076|gb|AAB19349.2| S3 ribosomal protein [Homo sapiens]
Length = 243
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISK+RKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKRRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|149068844|gb|EDM18396.1| rCG40478, isoform CRA_f [Rattus norvegicus]
Length = 181
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|308323395|gb|ADO28834.1| 40S ribosomal protein s3 [Ictalurus punctatus]
Length = 245
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|37595356|gb|AAQ94564.1| ribosomal protein S3 [Danio rerio]
Length = 245
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|149068845|gb|EDM18397.1| rCG40478, isoform CRA_g [Rattus norvegicus]
Length = 177
Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|410909578|ref|XP_003968267.1| PREDICTED: 40S ribosomal protein S3-like [Takifugu rubripes]
Length = 245
Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|225714094|gb|ACO12893.1| 40S ribosomal protein S3 [Lepeophtheirus salmonis]
Length = 237
Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 114/134 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+TQISKKRKFV+DGVF AELNE LTRELAEDGYSGVEV V P+RTEIII ATRTQNVLG
Sbjct: 1 MSTQISKKRKFVSDGVFKAELNEFLTRELAEDGYSGVEVHVAPLRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
+KGRRIRELTSVVQKRF FPENSVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 61 DKGRRIRELTSVVQKRFSFPENSVELYAEKVAARGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + R C
Sbjct: 121 GVLRYIMESGARGC 134
>gi|392881092|gb|AFM89378.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRE T+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIREFTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|74219656|dbj|BAE29595.1| unnamed protein product [Mus musculus]
Length = 243
Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQ+RF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQERFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|148684444|gb|EDL16391.1| ribosomal protein S3, isoform CRA_f [Mus musculus]
Length = 168
Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|320163406|gb|EFW40305.1| ribosomal protein S3 [Capsaspora owczarzaki ATCC 30864]
Length = 252
Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 106/115 (92%), Positives = 108/115 (93%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T +SKKRKFV DGVF AELNE LTRELAE+GYSGVEVRVTP RTEIIIRATRTQNVLGEK
Sbjct: 4 TPMSKKRKFVTDGVFRAELNEFLTRELAEEGYSGVEVRVTPTRTEIIIRATRTQNVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
GRRIRELTSVVQKRF FPENSVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 64 GRRIRELTSVVQKRFGFPENSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRR 118
>gi|197101391|ref|NP_001127020.1| 40S ribosomal protein S3 [Pongo abelii]
gi|75061590|sp|Q5R465.1|RS3_PONAB RecName: Full=40S ribosomal protein S3
gi|55733547|emb|CAH93451.1| hypothetical protein [Pongo abelii]
gi|62897657|dbj|BAD96768.1| ribosomal protein S3 variant [Homo sapiens]
Length = 243
Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAE+V RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|209733334|gb|ACI67536.1| 40S ribosomal protein S3 [Salmo salar]
Length = 244
Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGSKGC 134
>gi|392880950|gb|AFM89307.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 211 bits (537), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII A RTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILAARTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|74222288|dbj|BAE26946.1| unnamed protein product [Mus musculus]
Length = 243
Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F ELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKVELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|28189605|dbj|BAC56417.1| similar to ribosomal protein S3 [Bos taurus]
Length = 206
Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 107/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|209732420|gb|ACI67079.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGSKGC 134
>gi|197632569|gb|ACH71008.1| ribosomal protein S3-1 [Salmo salar]
gi|209738348|gb|ACI70043.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGSKGC 134
>gi|32532|emb|CAA39248.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAE LRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|46811251|gb|AAT01919.1| 40S ribosomal protein S3 [Pseudopleuronectes americanus]
Length = 246
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|50344456|emb|CAH04314.1| S3e ribosomal protein [Carabus granulatus]
Length = 239
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MTTTISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPE+SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFSFPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|328767669|gb|EGF77718.1| hypothetical protein BATDEDRAFT_91509 [Batrachochytrium
dendrobatidis JAM81]
Length = 240
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/134 (76%), Positives = 115/134 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T ISKKRKFVADGVF+AELNE L RELAE+GY+GVEVRVTP RTEI+IRATRTQNVLG
Sbjct: 1 MTTIISKKRKFVADGVFYAELNEFLQRELAEEGYAGVEVRVTPARTEIVIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTS+VQKRF +PEN+VELYAEKVNNRGL A+AQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSIVQKRFNYPENTVELYAEKVNNRGLSAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRFVMESGAKGC 134
>gi|149068846|gb|EDM18398.1| rCG40478, isoform CRA_h [Rattus norvegicus]
Length = 151
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/133 (81%), Positives = 114/133 (85%), Gaps = 5/133 (3%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR--- 117
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRVGS 120
Query: 118 --YILIISQILSN 128
+ +SQ L +
Sbjct: 121 QSHPPCLSQCLQH 133
>gi|160550139|gb|ABX44774.1| putative 40S ribosomal protein RPS3 [Flustra foliacea]
Length = 234
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/134 (78%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA Q+SKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MAAQVSKKRKFVNDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE +VELYAEKVNNRGLCAIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFNFPEGTVELYAEKVNNRGLCAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|13097759|gb|AAH03577.1| Unknown (protein for IMAGE:3544292), partial [Homo sapiens]
gi|15341992|gb|AAH13196.1| Unknown (protein for IMAGE:4347401), partial [Homo sapiens]
Length = 242
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/133 (79%), Positives = 112/133 (84%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGE
Sbjct: 1 AVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGE 60
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
KGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 KGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYG 120
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 121 VLRFIMESGAKGC 133
>gi|392875076|gb|AFM86370.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SV LYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVGLYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|392881056|gb|AFM89360.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQK F FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKGFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|392880630|gb|AFM89147.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRK VADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKLVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|147903619|ref|NP_001085315.1| 40S ribosomal protein S3-B [Xenopus laevis]
gi|1350988|sp|P47835.1|RS32_XENLA RecName: Full=40S ribosomal protein S3-B; AltName: Full=S1B
gi|587600|emb|CAA84291.1| ribosomal protein S1 [Xenopus laevis]
gi|587602|emb|CAA84290.1| ribosomal protein [Xenopus laevis]
Length = 246
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/134 (78%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA Q+SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP +TEIII ATRTQNVLG
Sbjct: 1 MAAQMSKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|41056077|ref|NP_957447.1| 40S ribosomal protein S3 [Danio rerio]
gi|28374213|gb|AAH45902.1| Ribosomal protein S3 [Danio rerio]
gi|182891740|gb|AAI65099.1| Rps3 protein [Danio rerio]
Length = 245
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/134 (78%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE VELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGGVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|223646268|gb|ACN09892.1| 40S ribosomal protein S3 [Salmo salar]
gi|223672115|gb|ACN12239.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPECNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGSKGC 134
>gi|402913757|ref|XP_003919330.1| PREDICTED: 40S ribosomal protein S3-like [Papio anubis]
Length = 243
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEV VTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVLVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|225715464|gb|ACO13578.1| 40S ribosomal protein S3 [Esox lucius]
Length = 247
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RG CAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGPCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGSKGC 134
>gi|392873428|gb|AFM85546.1| 40S ribosomal protein S3-like protein [Callorhinchus milii]
Length = 245
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF PE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGSPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|319004942|ref|NP_001187068.1| 40S ribosomal protein S3 [Ictalurus punctatus]
gi|22001962|sp|Q90YS2.1|RS3_ICTPU RecName: Full=40S ribosomal protein S3
gi|15294015|gb|AAK95184.1|AF402810_1 40S ribosomal protein S3 [Ictalurus punctatus]
Length = 245
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/134 (78%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FP SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPRGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|166952343|gb|ABZ04254.1| ribosomal protein rps3 [Lineus viridis]
Length = 213
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/134 (78%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQNVLG
Sbjct: 1 MATPISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATKTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPE++VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFSFPESTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|90076128|dbj|BAE87744.1| unnamed protein product [Macaca fascicularis]
gi|90076700|dbj|BAE88030.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/117 (90%), Positives = 108/117 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRR 117
>gi|260833516|ref|XP_002611703.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae]
gi|229297074|gb|EEN67713.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae]
Length = 226
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/134 (79%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA Q+SKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQVSKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFGFAEGTVELYAEKVAQRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|163658467|gb|ABY28373.1| ribosomal protein S3 [Oncorhynchus masou formosanus]
Length = 245
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/134 (78%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGV VRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVGVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGNVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGSKGC 134
>gi|72058324|ref|XP_798304.1| PREDICTED: 40S ribosomal protein S3-A-like [Strongylocentrotus
purpuratus]
Length = 279
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 105/134 (78%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MATQISKKRKFVADGVFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF F EN+VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFNFAENTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|255081971|ref|XP_002508204.1| predicted protein [Micromonas sp. RCC299]
gi|226523480|gb|ACO69462.1| predicted protein [Micromonas sp. RCC299]
Length = 233
Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 105/116 (90%), Positives = 109/116 (93%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGE
Sbjct: 3 SGNISKKRKFVADGVFFAELNELLIRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGE 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
KGRRIRELTS+VQKRF F E SVELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 63 KGRRIRELTSLVQKRFGFAEGSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRR 118
>gi|338726172|ref|XP_003365268.1| PREDICTED: 40S ribosomal protein S3-like [Equus caballus]
Length = 243
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 105/134 (78%), Positives = 111/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKR+FVA G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRQFVAHGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVAKRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + C
Sbjct: 121 GVLRFTMESGAKGC 134
>gi|121511934|gb|ABM55418.1| 40S ribosomal protein S3 [Xenopsylla cheopis]
Length = 243
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/134 (78%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T ISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MTTAISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF F +NSVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFNFIDNSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|357116410|ref|XP_003559974.1| PREDICTED: 40S ribosomal protein S3-3-like [Brachypodium
distachyon]
Length = 276
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/132 (76%), Positives = 113/132 (85%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
QISKKRKFVADGVF AELNE+LTREL EDG++GVE+RVTP+RTEIIIRATRTQ+VLGEK
Sbjct: 49 AQISKKRKFVADGVFLAELNEMLTRELGEDGFAGVEIRVTPMRTEIIIRATRTQSVLGEK 108
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELTSVVQKRF FP+ VELYAEKV NRGLCA+AQAESLRYKLLGGLAVRR +
Sbjct: 109 GRRIRELTSVVQKRFNFPDGGVELYAEKVLNRGLCAVAQAESLRYKLLGGLAVRRACYGV 168
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 169 LRFVMESGAKGC 180
>gi|443732033|gb|ELU16925.1| hypothetical protein CAPTEDRAFT_171942 [Capitella teleta]
Length = 242
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/134 (78%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKKRKFVA+GVF AELNE TRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MATQISKKRKFVANGVFKAELNEFFTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFNFQEGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|242005202|ref|XP_002423460.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis]
gi|212506548|gb|EEB10722.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis]
Length = 238
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/134 (76%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQ+VLG
Sbjct: 1 MATPISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
+KG+RIRELTSVVQKRF FPE +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 61 DKGKRIRELTSVVQKRFNFPEGTVELYAEKVAARGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|426343098|ref|XP_004038155.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Gorilla gorilla
gorilla]
gi|426343100|ref|XP_004038156.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Gorilla gorilla
gorilla]
gi|426343102|ref|XP_004038157.1| PREDICTED: 40S ribosomal protein S3-like isoform 3 [Gorilla gorilla
gorilla]
gi|426343104|ref|XP_004038158.1| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Gorilla gorilla
gorilla]
gi|426343106|ref|XP_004038159.1| PREDICTED: 40S ribosomal protein S3-like isoform 5 [Gorilla gorilla
gorilla]
gi|426343108|ref|XP_004038160.1| PREDICTED: 40S ribosomal protein S3-like isoform 6 [Gorilla gorilla
gorilla]
gi|426343110|ref|XP_004038161.1| PREDICTED: 40S ribosomal protein S3-like isoform 7 [Gorilla gorilla
gorilla]
Length = 243
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/134 (76%), Positives = 110/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKR FV DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQN+ G
Sbjct: 1 MAVQISKKRMFVTDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNIPG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAIVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|355752470|gb|EHH56590.1| hypothetical protein EGM_06037 [Macaca fascicularis]
Length = 243
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/134 (77%), Positives = 111/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAE+ YSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEECYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRR RELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRTRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|384497979|gb|EIE88470.1| 40S ribosomal protein S3 [Rhizopus delemar RA 99-880]
Length = 241
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 100/134 (74%), Positives = 114/134 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+A QISKKRKFVADGVF+AELNE LTRELAE GY+GVEVRVTP RTEIIIRAT TQNVLG
Sbjct: 4 VAAQISKKRKFVADGVFYAELNEFLTRELAEAGYAGVEVRVTPARTEIIIRATHTQNVLG 63
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRFKFPEN+VELYAE+V NRGLCAIAQ ES+++KLL GLAVRR
Sbjct: 64 EKGRRIRELTTLVQKRFKFPENAVELYAERVQNRGLCAIAQCESVKFKLLNGLAVRRACY 123
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 124 GVIRFVMESGAKGC 137
>gi|188572377|gb|ACD65095.1| putative 40S ribosomal protein RPS3 [Novocrania anomala]
Length = 170
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/134 (77%), Positives = 111/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT+ISKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRT NVLG
Sbjct: 1 MATRISKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTHNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVR+
Sbjct: 61 EKGRRIRELTSVVQKRFSFPEGTVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRQACY 120
Query: 121 IISQILSNKALRSC 134
+ + + C
Sbjct: 121 GVLRFIMESGANGC 134
>gi|28189869|dbj|BAC56549.1| similar to ribosomal protein S3 [Bos taurus]
Length = 147
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/130 (80%), Positives = 110/130 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGR
Sbjct: 1 ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR + +
Sbjct: 61 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 120
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 121 FIMESGAKGC 130
>gi|121543809|gb|ABM55569.1| putative ribosomal protein S3 [Maconellicoccus hirsutus]
Length = 248
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 101/134 (75%), Positives = 111/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +SKKRKFVADGVF AELNE L RELAEDGYSGV++RVTP RTEIII ATRTQNVLG
Sbjct: 1 MTRTVSKKRKFVADGVFKAELNEFLMRELAEDGYSGVQIRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRFKFP+ S+ELYAEKV RGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFKFPDGSIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|145345927|ref|XP_001417450.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
gi|144577677|gb|ABO95743.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
Length = 231
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/117 (86%), Positives = 109/117 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+AT ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVR TP+RTEIIIRATRT NVLG
Sbjct: 2 VATAISKKRKFVADGVFFAELNEMLVRELAEDGYSGVEVRQTPMRTEIIIRATRTANVLG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELT++VQ+RF+ E SVELYAE+VNNRGLCAIAQ ESLRYKLLGGLAVRR
Sbjct: 62 EKGRRIRELTTLVQRRFQMAEGSVELYAERVNNRGLCAIAQCESLRYKLLGGLAVRR 118
>gi|318087144|gb|ADV40164.1| ribosomal protein S3 [Latrodectus hesperus]
Length = 238
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/132 (79%), Positives = 109/132 (82%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISKKRKFVADGVF AELNE L RELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEK
Sbjct: 4 TTISKKRKFVADGVFKAELNEFLRRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKL+GGLAVRR +
Sbjct: 64 GRRIRELTSVVQKRFNFPEGSVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGV 123
Query: 123 SQILSNKALRSC 134
+ + R C
Sbjct: 124 LRFIMESGARGC 135
>gi|149287156|gb|ABR23477.1| 40S ribosomal protein S3 [Ornithodoros parkeri]
Length = 240
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/134 (76%), Positives = 112/134 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +QISKKRKFVADGVF AELNE L RELAEDGYSGVEVRVTP TEIII ATRTQ+VLG
Sbjct: 1 MTSQISKKRKFVADGVFKAELNEFLRRELAEDGYSGVEVRVTPQNTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPEN+VELYAEKV +RGLCAIAQ ESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFSFPENTVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|116488040|gb|ABJ98602.1| 40S ribosomal protein S3 [Scophthalmus maximus]
Length = 147
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/130 (79%), Positives = 110/130 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGR
Sbjct: 5 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGR 64
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR + +
Sbjct: 65 RIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLR 124
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 125 FIMESGAKGC 134
>gi|237862670|gb|ACR24960.1| ribosomal protein S3 [Lepidochitona cinerea]
Length = 156
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/133 (77%), Positives = 111/133 (83%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
ATQ+SKKRKFVADGVF AELNE LTRELAEDGYSGVEVRVT RTEIII AT+TQNVLGE
Sbjct: 1 ATQVSKKRKFVADGVFKAELNEFLTRELAEDGYSGVEVRVTQTRTEIIILATKTQNVLGE 60
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
KGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKL+GGLAVRR
Sbjct: 61 KGRRIRELTAVVQKRFNFPEGSVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYG 120
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 121 VLKFIMESQAKGC 133
>gi|307103536|gb|EFN51795.1| hypothetical protein CHLNCDRAFT_59796 [Chlorella variabilis]
Length = 230
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/134 (74%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA+ +SK RK VADGVF+AELNE+L REL +GYSGVEVRVTP+RTE+IIRATRTQNVLG
Sbjct: 1 MASAVSKTRKAVADGVFYAELNELLMRELGGEGYSGVEVRVTPMRTEVIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
KGRRIRELTSVVQKRFKFPE SVELYAEKV NRGLCA+AQAES+RYKLLGGLAVRR
Sbjct: 61 VKGRRIRELTSVVQKRFKFPEGSVELYAEKVANRGLCAVAQAESMRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|332220518|ref|XP_003259402.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Nomascus
leucogenys]
gi|441635552|ref|XP_003259404.2| PREDICTED: 40S ribosomal protein S3-like isoform 4 [Nomascus
leucogenys]
gi|441635555|ref|XP_004089921.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635558|ref|XP_004089922.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635561|ref|XP_004089923.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635564|ref|XP_004089924.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635567|ref|XP_004089925.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635570|ref|XP_004089926.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
gi|441635573|ref|XP_004089927.1| PREDICTED: 40S ribosomal protein S3-like [Nomascus leucogenys]
Length = 243
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/134 (76%), Positives = 110/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M QISKKRKF+ADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MVVQISKKRKFIADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRI ELT+VVQKRF FPE VELYAEKV RGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIPELTAVVQKRFGFPEGIVELYAEKVATRGLCAIAQAESLRYKLVGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIIESGAKGC 134
>gi|40643020|emb|CAD91437.1| ribosomal protein S3 [Crassostrea gigas]
Length = 187
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/134 (76%), Positives = 110/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA +SKK+KFVADGVF AELN LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 2 MANPVSKKKKFVADGVFKAELNNFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRR
Sbjct: 62 EKGRRIRELTSVVQKRFNFPEGTVELYAEKVAQRGLCAIAQCESLRYKLIGGLAVRRACY 121
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 122 GVLRFIMESGAKGC 135
>gi|386869503|ref|NP_001247435.1| 40S ribosomal protein S3 isoform 2 [Homo sapiens]
gi|397487321|ref|XP_003814751.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Pan paniscus]
Length = 259
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/150 (71%), Positives = 113/150 (75%), Gaps = 16/150 (10%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVE----------------LYAEKVNNRGLCAIAQAES 104
EKGRRIRELT+VVQKRF FPE SVE LYAEKV RGLCAIAQAES
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELKIMVMVTGYPLLPLKLYAEKVATRGLCAIAQAES 120
Query: 105 LRYKLLGGLAVRRYILIISQILSNKALRSC 134
LRYKLLGGLAVRR + + + + C
Sbjct: 121 LRYKLLGGLAVRRACYGVLRFIMESGAKGC 150
>gi|389608265|dbj|BAM17744.1| ribosomal protein S3 [Papilio xuthus]
Length = 244
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 109/130 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR + +
Sbjct: 66 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 125
Query: 125 ILSNKALRSC 134
+ R C
Sbjct: 126 FIMESGARGC 135
>gi|112984112|ref|NP_001037253.1| ribosomal protein S3 [Bombyx mori]
gi|54609285|gb|AAV34858.1| ribosomal protein S3 [Bombyx mori]
Length = 243
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 109/130 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR + +
Sbjct: 66 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 125
Query: 125 ILSNKALRSC 134
+ R C
Sbjct: 126 FIMESGARGC 135
>gi|323450925|gb|EGB06804.1| hypothetical protein AURANDRAFT_60177 [Aureococcus anophagefferens]
Length = 231
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/117 (86%), Positives = 111/117 (94%), Gaps = 1/117 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADG+F+AELNE+LTRELAEDGY+GVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MAT-ISKKRKFVADGLFYAELNELLTRELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLG 59
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKG+RIRELTSVVQKRF F + +VELYAE+V NRGLCA AQAESL+YKLLGGLAVRR
Sbjct: 60 EKGQRIRELTSVVQKRFHFQDGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRR 116
>gi|388507388|gb|AFK41760.1| unknown [Lotus japonicus]
Length = 258
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 115/130 (88%), Gaps = 1/130 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
AT ISKKRK +ADGVF+AELNE+LTREL E+GYSGVEVRVTP+RTEIIIRATRTQNVLGE
Sbjct: 3 ATNISKKRKIIADGVFYAELNELLTRELGEEGYSGVEVRVTPLRTEIIIRATRTQNVLGE 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL- 120
KGRRIRELTS+VQKRF FPE +VELYAE+V+NR L AIAQAESLR+KLLGGLAVRR
Sbjct: 63 KGRRIRELTSLVQKRFNFPEGNVELYAERVSNRALSAIAQAESLRFKLLGGLAVRRACYG 122
Query: 121 IISQILSNKA 130
++ I+ N A
Sbjct: 123 VLRYIMENGA 132
>gi|28189875|dbj|BAC56552.1| similar to S3 ribosomal protein [Bos taurus]
Length = 145
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/128 (79%), Positives = 108/128 (84%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
KKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRI
Sbjct: 1 KKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRI 60
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQIL 126
RELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR + + +
Sbjct: 61 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 120
Query: 127 SNKALRSC 134
+ C
Sbjct: 121 MESGAKGC 128
>gi|389610621|dbj|BAM18922.1| ribosomal protein S3 [Papilio polytes]
Length = 244
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 109/130 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR + +
Sbjct: 66 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 125
Query: 125 ILSNKALRSC 134
+ R C
Sbjct: 126 FIMESGARGC 135
>gi|357611706|gb|EHJ67618.1| 40S ribosomal protein S3 [Danaus plexippus]
Length = 245
Score = 201 bits (512), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 109/130 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTSVVQKRF PE+SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR + +
Sbjct: 66 RIRELTSVVQKRFNIPEHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 125
Query: 125 ILSNKALRSC 134
+ R C
Sbjct: 126 FIMESGARGC 135
>gi|315115341|gb|ADT80643.1| ribosomal protein S3 [Euphydryas aurinia]
Length = 243
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 108/130 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR + +
Sbjct: 66 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 125
Query: 125 ILSNKALRSC 134
+ R C
Sbjct: 126 FIMESGARGC 135
>gi|50284382|emb|CAH04122.1| ribsomal protein S3e [Papilio dardanus]
Length = 220
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 102/132 (77%), Positives = 109/132 (82%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP+R+EIII ATRTQ+VLGEK
Sbjct: 4 NNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR +
Sbjct: 64 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 SQILSNKALRSC 134
+ + R C
Sbjct: 124 LRFIMESGARGC 135
>gi|1350990|sp|P48153.1|RS3_MANSE RecName: Full=40S ribosomal protein S3
gi|527680|gb|AAB05575.1| ribosomal protein S3 [Manduca sexta]
Length = 243
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 108/130 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR + +
Sbjct: 66 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 125
Query: 125 ILSNKALRSC 134
+ R C
Sbjct: 126 FIMESGARGC 135
>gi|61654704|gb|AAX48878.1| S3 [Suberites domuncula]
Length = 246
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/134 (73%), Positives = 110/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA Q SKKRKFVADG+F AELN L+REL+EDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQTSKKRKFVADGIFKAELNNFLSRELSEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FP+ +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPDGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|412989948|emb|CCO20590.1| 40S ribosomal protein S3 [Bathycoccus prasinos]
Length = 233
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/122 (84%), Positives = 108/122 (88%), Gaps = 5/122 (4%)
Query: 1 MATQ-----ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRT 55
M TQ ISKKRKFVADGVFFAELNE+L RELAEDGYSGVEVR TPV+ EIIIRATRT
Sbjct: 1 MTTQASSLNISKKRKFVADGVFFAELNEMLVRELAEDGYSGVEVRSTPVKMEIIIRATRT 60
Query: 56 QNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV 115
QNVLGEKGRRIRELTS+VQKRF F E +VELYAEKV NRGLCAI+Q ESLRYKLLGGLAV
Sbjct: 61 QNVLGEKGRRIRELTSLVQKRFGFAEGAVELYAEKVANRGLCAISQCESLRYKLLGGLAV 120
Query: 116 RR 117
RR
Sbjct: 121 RR 122
>gi|16566719|gb|AAL26578.1|AF429976_1 ribosomal protein S3 [Spodoptera frugiperda]
Length = 243
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 108/130 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR + +
Sbjct: 66 RIRELTSVVQKRFNIPERSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 125
Query: 125 ILSNKALRSC 134
+ R C
Sbjct: 126 FIMESGARGC 135
>gi|198434172|ref|XP_002129244.1| PREDICTED: similar to putative 40S ribosomal protein RPS3 [Ciona
intestinalis]
Length = 260
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/134 (75%), Positives = 111/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV DG+F AELNE+L RELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAAQISKKRKFVNDGLFKAELNELLWRELAEDGYSGVEVRVTPSRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRFKF ++ VELYAEKV NRGLCA AQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAMVQKRFKFKDDGVELYAEKVANRGLCATAQCESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|342356327|gb|AEL28822.1| ribosomal protein S3 [Heliconius melpomene cythera]
Length = 242
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 108/130 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR + +
Sbjct: 66 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 125
Query: 125 ILSNKALRSC 134
+ R C
Sbjct: 126 FIMESGARGC 135
>gi|116090821|gb|ABJ55992.1| ribosomal protein S3 [Ostrinia nubilalis]
Length = 241
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/130 (78%), Positives = 108/130 (83%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR + +
Sbjct: 66 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 125
Query: 125 ILSNKALRSC 134
+ R C
Sbjct: 126 FIMESGARGC 135
>gi|288869512|ref|NP_001165863.1| ribosomal protein S3 [Tribolium castaneum]
gi|270006106|gb|EFA02554.1| hypothetical protein TcasGA2_TC008261 [Tribolium castaneum]
Length = 241
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/117 (86%), Positives = 104/117 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATPISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EK RRIRELTSVVQKRF FPENSV LY EKV NRGLCAIAQAESLR+KL+GGLAVRR
Sbjct: 61 EKNRRIRELTSVVQKRFNFPENSVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRR 117
>gi|358346770|ref|XP_003637438.1| 40S ribosomal protein S3 [Medicago truncatula]
gi|355503373|gb|AES84576.1| 40S ribosomal protein S3 [Medicago truncatula]
Length = 237
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/134 (72%), Positives = 113/134 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRK VADGV AE++E L+R LAEDGYSGVE+RVTP+RTEIII+ATRTQ VLG
Sbjct: 1 MATQMSKKRKVVADGVLNAEMHEFLSRVLAEDGYSGVEIRVTPIRTEIIIKATRTQAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+++ KRF FPENSV+LYAEKV+NRGLCA AQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTTLIHKRFNFPENSVQLYAEKVSNRGLCAAAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|449885323|gb|AGF29412.1| ribosomal protein S3 [Phaedon cochleariae]
Length = 240
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/117 (86%), Positives = 104/117 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATTISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EK RRIRELTSVVQKRF FPENSV LY EKV NRGLCAIAQAESLR+KL+GGLAVRR
Sbjct: 61 EKNRRIRELTSVVQKRFNFPENSVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRR 117
>gi|442755587|gb|JAA69953.1| Putative 40s ribosomal protein s3 [Ixodes ricinus]
Length = 243
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/134 (76%), Positives = 110/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF AELNE L RELAEDGYSGVEVRVTP TEIII ATRTQ+VLG
Sbjct: 1 MANPISKKRKFVADGVFKAELNEFLRRELAEDGYSGVEVRVTPQNTEIIILATRTQSVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPE +VELYAEKV +RGLCAIAQ ESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTSVVQKRFSFPEGTVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|422293192|gb|EKU20492.1| small subunit ribosomal protein S3e [Nannochloropsis gaditana
CCMP526]
Length = 243
Score = 199 bits (507), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/117 (82%), Positives = 108/117 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T ISKKRKF+ADGVF+AELNE+LTRELAEDGY+GVEVRV P+RTEIII ATRTQNVLG
Sbjct: 1 MTTNISKKRKFIADGVFYAELNELLTRELAEDGYAGVEVRVVPLRTEIIISATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKG+RIRELT+V+QKRF FP+ VEL+AEKV +RGLCA AQAESL+YKLLGGLAVRR
Sbjct: 61 EKGQRIRELTTVIQKRFNFPDGVVELFAEKVASRGLCAQAQAESLKYKLLGGLAVRR 117
>gi|291389681|ref|XP_002711316.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus]
Length = 286
Score = 199 bits (507), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/129 (78%), Positives = 107/129 (82%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRR
Sbjct: 49 SKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRR 108
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQI 125
IRELT VVQ RF FPE SVELYAEKV RGLCAIAQAESLRY+LLGGLAVRR + +
Sbjct: 109 IRELTVVVQTRFGFPEGSVELYAEKVAMRGLCAIAQAESLRYQLLGGLAVRRACYGVLRF 168
Query: 126 LSNKALRSC 134
+ + C
Sbjct: 169 IMESGAKGC 177
>gi|332375642|gb|AEE62962.1| unknown [Dendroctonus ponderosae]
Length = 232
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/117 (85%), Positives = 104/117 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATTISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EK RRIRELTSVVQKRF FPENS+ LY EKV NRGLCAIAQAESLR+KL+GGLAVRR
Sbjct: 61 EKNRRIRELTSVVQKRFNFPENSIVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRR 117
>gi|379994413|gb|AFD22833.1| 40S ribosomal protein S3 [Collodictyon triciliatum]
Length = 173
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 94/117 (80%), Positives = 109/117 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ +ISKK+KFVADGVFFAELNE TR+L EDGY+GVEVRVTP RTE+IIRATRTQNVLG
Sbjct: 1 MSLEISKKKKFVADGVFFAELNEFFTRQLGEDGYAGVEVRVTPARTEVIIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+KGRRIRELTS+VQKRF+F E ++EL+AE V++RGLCA+AQAESLRYKLLGGLAVRR
Sbjct: 61 DKGRRIRELTSLVQKRFRFKEGTIELFAENVSSRGLCAVAQAESLRYKLLGGLAVRR 117
>gi|452821888|gb|EME28913.1| 40S ribosomal protein S3e [Galdieria sulphuraria]
Length = 227
Score = 199 bits (505), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/134 (73%), Positives = 114/134 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT +SKKR+ VADGVF AELNE L REL+E+GYSGVEV+ TP+RTEI+IRATRTQNVLG
Sbjct: 1 MATLMSKKRRAVADGVFKAELNEFLMRELSEEGYSGVEVKPTPLRTEIVIRATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRF+FPE +VELYAEKV +RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTALVQKRFRFPEGTVELYAEKVADRGLCAIAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|196012547|ref|XP_002116136.1| ribosomal protein S3e [Trichoplax adhaerens]
gi|190581459|gb|EDV21536.1| ribosomal protein S3e [Trichoplax adhaerens]
Length = 228
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/133 (73%), Positives = 109/133 (81%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISKKRKFVADG+F AELN L+RELAEDGYSGVEVRVTP RTEIII ATRTQNVLGE
Sbjct: 3 AASISKKRKFVADGIFRAELNNFLSRELAEDGYSGVEVRVTPTRTEIIISATRTQNVLGE 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
KGRRIREL S++QKRF FPE+SVE+YAEKV RGLCAIAQ ESLRYKL+GGLAVRR
Sbjct: 63 KGRRIRELMSLIQKRFNFPEDSVEIYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYG 122
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 123 VLRFIMESGAKGC 135
>gi|326533734|dbj|BAK05398.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/133 (73%), Positives = 110/133 (82%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ Q+SK+RKFVADGVF AE+NE TRELAE+GYSG EVRVT RTEIIIRAT TQ VLGE
Sbjct: 5 SAQLSKRRKFVADGVFNAEINEFFTRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
KGRRIRELTS+VQKRFKFPENS+ELYAEKV NRGL A+AQAESLRYKLLGGLAVRR
Sbjct: 65 KGRRIRELTSLVQKRFKFPENSLELYAEKVQNRGLSAVAQAESLRYKLLGGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|62645168|ref|XP_575143.1| PREDICTED: 40S ribosomal protein S3-like [Rattus norvegicus]
gi|109470011|ref|XP_001057158.1| PREDICTED: 40S ribosomal protein S3-like [Rattus norvegicus]
Length = 243
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 102/134 (76%), Positives = 108/134 (80%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYS VEVRVTP RTEIII TRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSRVEVRVTPTRTEIIILGTRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQK+F FPE SVELYAEKV GLCAIAQAESL YKLLGGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKQFVFPEGSVELYAEKVATGGLCAIAQAESLCYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + C
Sbjct: 121 GVLRFIMESGAEGC 134
>gi|390604317|gb|EIN13708.1| ribosomal protein S3 [Punctularia strigosozonata HHB-11173 SS5]
Length = 265
Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/134 (74%), Positives = 110/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M++QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSSQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRFKFPENSVELYAEKV RGL AIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSVELYAEKVTYRGLSAIAQCESLRYKLLGGLAVRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|159145672|gb|ABW90373.1| putative ribosomal protein S3 [Sipunculus nudus]
Length = 126
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 98/117 (83%), Positives = 104/117 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADG+F AELNE TRELAEDGYSGVEVRVTP RTEIII ATRTQ VLG
Sbjct: 1 MATQVSKKRKFVADGLFKAELNEFFTRELAEDGYSGVEVRVTPTRTEIIILATRTQQVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+KGRRIRELTSVVQKRF FPE +VELY +KV NRGLCAI Q ESLRYKL+GGLAV R
Sbjct: 61 DKGRRIRELTSVVQKRFNFPEGTVELYVQKVANRGLCAITQCESLRYKLIGGLAVTR 117
>gi|340379265|ref|XP_003388147.1| PREDICTED: 40S ribosomal protein S3-like [Amphimedon queenslandica]
Length = 236
Score = 197 bits (502), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 98/132 (74%), Positives = 109/132 (82%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+ +SKKRKFVADGVF AELN L++ELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEK
Sbjct: 2 STLSKKRKFVADGVFKAELNAFLSKELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRR +
Sbjct: 62 GRRIRELTAVVQKRFSFPEGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGV 121
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 122 LRFIMESGAKGC 133
>gi|221126927|ref|XP_002162713.1| PREDICTED: 40S ribosomal protein S3-like [Hydra magnipapillata]
Length = 239
Score = 197 bits (502), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/134 (73%), Positives = 108/134 (80%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA I+KK+KFV+DGVF AELNE L RELAEDGYSGVEVRVTP+RTEIII ATRTQNVLG
Sbjct: 1 MAAPITKKKKFVSDGVFKAELNEFLKRELAEDGYSGVEVRVTPLRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKLL G VR+
Sbjct: 61 EKGRRIRELTSVVQKRFNFPEGSVELYAEKVATRGLCAIAQCESLRYKLLAGAPVRKACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRFIMESGAKGC 134
>gi|264667327|gb|ACY71249.1| ribosomal protein S3 [Chrysomela tremula]
Length = 240
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/117 (85%), Positives = 103/117 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEIII ATRT VLG
Sbjct: 1 MATTISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EK RRIRELTSVVQKRF FPE SV LY EKV NRGLCAIAQAESLR+KL+GGLAVRR
Sbjct: 61 EKNRRIRELTSVVQKRFNFPEGSVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRR 117
>gi|340384078|ref|XP_003390542.1| PREDICTED: 40S ribosomal protein S3-like [Amphimedon queenslandica]
Length = 236
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/132 (74%), Positives = 109/132 (82%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+ +SKKRKFVADGVF AELN L++ELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEK
Sbjct: 2 STLSKKRKFVADGVFKAELNAFLSKELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELT+VVQKRF FPE +VELYAEKV RGLCAIAQ ESLRYKL+GGLAVRR +
Sbjct: 62 GRRIRELTAVVQKRFSFPEGTVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGV 121
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 122 LRFIMESGAKGC 133
>gi|393218435|gb|EJD03923.1| ribosomal protein S3 [Fomitiporia mediterranea MF3/22]
Length = 264
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/134 (73%), Positives = 110/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA+QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MASQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL A+AQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAVAQCESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|156553282|ref|XP_001599651.1| PREDICTED: 40S ribosomal protein S3-like [Nasonia vitripennis]
Length = 242
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 109/132 (82%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEK
Sbjct: 4 TTISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPQRTEIILMATHTQSVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELTSVVQKRF F ++SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR +
Sbjct: 64 GRRIRELTSVVQKRFNFKDHSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 123
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 124 LRFIMESGAKGC 135
>gi|299755573|ref|XP_002912114.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130]
gi|298411286|gb|EFI28620.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130]
Length = 258
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/134 (74%), Positives = 110/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA+QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MASQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|19113555|ref|NP_596763.1| 40S ribosomal protein S3 [Schizosaccharomyces pombe 972h-]
gi|6094179|sp|O60128.1|RS3_SCHPO RecName: Full=40S ribosomal protein S3
gi|3133108|emb|CAA19033.1| 40S ribosomal protein S3 (predicted) [Schizosaccharomyces pombe]
gi|110082655|dbj|BAE97279.1| ribosomal protein s3 [Schizosaccharomyces pombe]
Length = 249
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/116 (82%), Positives = 105/116 (90%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISKKRKFVADGVF+AELNE TREL+E+GYSG EVRVTP R+EIIIRAT TQ+VLGE
Sbjct: 4 AFTISKKRKFVADGVFYAELNEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGE 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
KGRRIRELT++VQKRFKF EN+VELYAEKV NRGLCA+AQ ESLRYKLL GLAVRR
Sbjct: 64 KGRRIRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRR 119
>gi|170095049|ref|XP_001878745.1| 40S ribosomal protein S3 [Laccaria bicolor S238N-H82]
gi|164646049|gb|EDR10295.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 262
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/134 (73%), Positives = 110/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M++QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSSQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|302695173|ref|XP_003037265.1| 40S ribosomal protein S3 [Schizophyllum commune H4-8]
gi|300110962|gb|EFJ02363.1| hypothetical protein SCHCODRAFT_84144 [Schizophyllum commune H4-8]
Length = 266
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/134 (74%), Positives = 109/134 (81%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADGVF AELN+ TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MAAQISKKRKFVADGVFRAELNDFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTS+VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSLVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|213410238|ref|XP_002175889.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275]
gi|212003936|gb|EEB09596.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275]
Length = 251
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/116 (82%), Positives = 105/116 (90%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISKKRKFVADGVF+AELNE TREL+E+GYSG EVRVTP R+EIIIRAT TQ+VLGE
Sbjct: 3 ALTISKKRKFVADGVFYAELNEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGE 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
KGRRIRELT++VQKRFKF EN+VELYAEKV NRGLCA+AQ ESLRYKLL GLAVRR
Sbjct: 63 KGRRIRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRR 118
>gi|395521196|ref|XP_003764704.1| PREDICTED: 40S ribosomal protein S3 [Sarcophilus harrisii]
Length = 245
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/125 (78%), Positives = 105/125 (84%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
+FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIREL
Sbjct: 12 QFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIREL 71
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNK 129
T+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR + + +
Sbjct: 72 TAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMES 131
Query: 130 ALRSC 134
+ C
Sbjct: 132 GAKGC 136
>gi|294932119|ref|XP_002780125.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239890023|gb|EER11920.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 261
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/114 (82%), Positives = 107/114 (93%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRR
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRR 122
>gi|294875936|ref|XP_002767474.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239869132|gb|EER00192.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 261
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/114 (82%), Positives = 107/114 (93%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRR
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRR 122
>gi|296423595|ref|XP_002841339.1| 40S ribosomal protein S3 [Tuber melanosporum Mel28]
gi|295637576|emb|CAZ85530.1| unnamed protein product [Tuber melanosporum]
Length = 360
Score = 196 bits (498), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 107/130 (82%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE TRELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 88 ISKRRKFVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 147
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGLCA+AQ ESLRYKLL GLAVRR + +
Sbjct: 148 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLCAVAQCESLRYKLLNGLAVRRACYGVLR 207
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 208 FIMESGAKGC 217
>gi|321464706|gb|EFX75712.1| hypothetical protein DAPPUDRAFT_306633 [Daphnia pulex]
Length = 242
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/135 (76%), Positives = 110/135 (81%), Gaps = 1/135 (0%)
Query: 1 MAT-QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MAT QISKKRKFVA GVF AELN LTRELAEDGYSGVEVR+ P RTEIII ATRTQNVL
Sbjct: 1 MATAQISKKRKFVAGGVFKAELNAFLTRELAEDGYSGVEVRLAPTRTEIIILATRTQNVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
GEKGRRIRELTSVVQKRF F E +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 61 GEKGRRIRELTSVVQKRFGFQEGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 120
Query: 120 LIISQILSNKALRSC 134
+ + + + C
Sbjct: 121 YGVLRFIMESGAKGC 135
>gi|301107834|ref|XP_002902999.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4]
gi|262098117|gb|EEY56169.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4]
Length = 246
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/117 (82%), Positives = 106/117 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF+AELNE+L REL DGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MAANISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPMRTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKG+RIR LTSVVQKRF FP+ +VELYAE+V NRGLC+ AQAESL+Y+LLGGLAVRR
Sbjct: 61 EKGQRIRALTSVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRR 117
>gi|403173943|ref|XP_003332971.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170763|gb|EFP88552.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 265
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/132 (73%), Positives = 108/132 (81%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVFFAEL+E TRELAE+GYSG EVRVT RTE+IIRAT TQ VLG+K
Sbjct: 2 TTISKRRKFVADGVFFAELSEFFTRELAEEGYSGCEVRVTHARTEVIIRATHTQEVLGQK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELTS+VQKRFKFPE SVELYAEKV RGLCA+AQ ESLRYKLLGGLAVRR +
Sbjct: 62 GRRIRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGV 121
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 122 LRFIMESNAKGC 133
>gi|281353139|gb|EFB28723.1| hypothetical protein PANDA_003327 [Ailuropoda melanoleuca]
Length = 233
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/124 (79%), Positives = 104/124 (83%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKA 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR + + +
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 LRSC 134
+ C
Sbjct: 121 AKGC 124
>gi|348670844|gb|EGZ10665.1| hypothetical protein PHYSODRAFT_287105 [Phytophthora sojae]
Length = 249
Score = 196 bits (497), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/117 (82%), Positives = 106/117 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF+AELNE+L REL DGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MAANISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPMRTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKG+RIR LTSVVQKRF FP+ +VELYAE+V NRGLC+ AQAESL+Y+LLGGLAVRR
Sbjct: 61 EKGQRIRALTSVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRR 117
>gi|426202100|gb|EKV52023.1| hypothetical protein AGABI2DRAFT_239505 [Agaricus bisporus var.
bisporus H97]
Length = 265
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/134 (73%), Positives = 109/134 (81%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|37724563|gb|AAO20336.1| ribosomal protein S3 [Hydra vulgaris]
Length = 238
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/133 (73%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A I+KK+KFV+DGVF AELNE L RELAEDGYSGVEVRVTP+RTEIII ATRTQNVLGE
Sbjct: 1 AAPITKKKKFVSDGVFKAELNEFLKRELAEDGYSGVEVRVTPLRTEIIILATRTQNVLGE 60
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
KGRRIRELTSVVQKRF FPE SVELYAEKV RGLCAIAQ ESLRYKLL G VR+
Sbjct: 61 KGRRIRELTSVVQKRFNFPEGSVELYAEKVATRGLCAIAQCESLRYKLLAGAPVRKACYG 120
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 121 VVRFIMESGAKGC 133
>gi|397567805|gb|EJK45790.1| hypothetical protein THAOC_35575 [Thalassiosira oceanica]
Length = 266
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/136 (72%), Positives = 114/136 (83%), Gaps = 2/136 (1%)
Query: 1 MAT--QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNV 58
MAT ++S KRKFVADGVF+AELNE+LTRELAEDGY+GVEVR TP RTEIIIRAT+TQNV
Sbjct: 2 MATRAKMSTKRKFVADGVFYAELNELLTRELAEDGYAGVEVRTTPHRTEIIIRATKTQNV 61
Query: 59 LGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY 118
LGEKG+RIRELTSVVQKRF F E +VELYAE+V NRGLCA AQAESL++KLL GLAVRR
Sbjct: 62 LGEKGQRIRELTSVVQKRFDFAEGAVELYAERVQNRGLCAQAQAESLKFKLLAGLAVRRA 121
Query: 119 ILIISQILSNKALRSC 134
+ + + + + C
Sbjct: 122 CYGVVRFVMEASAKGC 137
>gi|294897613|ref|XP_002776024.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239882489|gb|EER07840.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/114 (82%), Positives = 107/114 (93%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRR
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRR 122
>gi|294886505|ref|XP_002771736.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239875488|gb|EER03552.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 184
Score = 195 bits (496), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/114 (82%), Positives = 107/114 (93%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRR
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRR 122
>gi|325183864|emb|CCA18322.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14]
gi|325183947|emb|CCA18405.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14]
Length = 246
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 98/134 (73%), Positives = 111/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT ISKKRKFVADGVF+AELNE+L REL DGYSGVEVRVTP+RTEIIIRATRTQ VLG
Sbjct: 1 MATNISKKRKFVADGVFYAELNELLQRELYGDGYSGVEVRVTPLRTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKG+RIRELTSVVQKRF F E SVELYAE++ NRGLC+ AQAESL+Y+LL GLAVRR
Sbjct: 61 EKGQRIRELTSVVQKRFNFAEGSVELYAERIANRGLCSQAQAESLKYRLLEGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 SVLRFVMEAGAKGC 134
>gi|294877217|ref|XP_002767926.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239869954|gb|EER00644.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 200
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 94/114 (82%), Positives = 107/114 (93%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL VRR
Sbjct: 69 RRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRR 122
>gi|62083397|gb|AAX62423.1| ribosomal protein S3 [Lysiphlebus testaceipes]
Length = 234
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/130 (75%), Positives = 107/130 (82%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 8 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIILMATHTQSVLGEKGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTSVVQKRF F + +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRR + +
Sbjct: 68 RIRELTSVVQKRFGFKDGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 127
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 128 FIMESGAKGC 137
>gi|357016985|gb|AET50521.1| hypothetical protein [Eimeria tenella]
Length = 233
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/132 (74%), Positives = 110/132 (83%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISKKRKFV DGVF AELNE L+R LAEDGYSGVEVRVTP+RTEIIIRATRT+ VLGEK
Sbjct: 5 TNISKKRKFVNDGVFQAELNEFLSRTLAEDGYSGVEVRVTPIRTEIIIRATRTREVLGEK 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELTS+VQKRF FP +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRR +
Sbjct: 65 GRRIRELTSLVQKRFGFPPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGV 124
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 125 LRHIMESGAKGC 136
>gi|44968137|gb|AAS49584.1| ribosomal protein S3 [Gallus gallus]
Length = 211
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/124 (79%), Positives = 104/124 (83%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKA 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR + + +
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 LRSC 134
+ C
Sbjct: 121 AKGC 124
>gi|336370495|gb|EGN98835.1| hypothetical protein SERLA73DRAFT_181508 [Serpula lacrymans var.
lacrymans S7.3]
gi|336383275|gb|EGO24424.1| hypothetical protein SERLADRAFT_467690 [Serpula lacrymans var.
lacrymans S7.9]
Length = 262
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 99/134 (73%), Positives = 108/134 (80%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MAAHISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQFRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|403178905|ref|XP_003337266.2| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164530|gb|EFP92847.2| small subunit ribosomal protein S3e [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 341
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 96/132 (72%), Positives = 108/132 (81%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AEL+E TRELAE+GYSG EVRVT RTE+IIRAT TQ VLG+K
Sbjct: 78 TTISKRRKFVADGVFYAELSEFFTRELAEEGYSGCEVRVTHARTEVIIRATHTQEVLGQK 137
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELTS+VQKRFKFPE SVELYAEKV RGLCA+AQ ESLRYKLLGGLAVRR +
Sbjct: 138 GRRIRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGV 197
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 198 LRFIMESNAKGC 209
>gi|118793920|ref|XP_321155.3| AGAP001910-PA [Anopheles gambiae str. PEST]
gi|116116043|gb|EAA01737.4| AGAP001910-PA [Anopheles gambiae str. PEST]
Length = 244
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 98/134 (73%), Positives = 109/134 (81%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNTVSKKRRFVANGMFHAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VV+KRF F SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTAVVRKRFGFAPGSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|395833096|ref|XP_003789581.1| PREDICTED: 40S ribosomal protein S3-like isoform 1 [Otolemur
garnettii]
gi|395833098|ref|XP_003789582.1| PREDICTED: 40S ribosomal protein S3-like isoform 2 [Otolemur
garnettii]
Length = 123
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 100/117 (85%), Positives = 104/117 (88%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVAD +F AELNE LTRE+AEDGYSGVEVRVTP RT III ATRT+NVLG
Sbjct: 1 MAVQISKKRKFVADDIFKAELNEFLTREVAEDGYSGVEVRVTPTRTAIIILATRTRNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGR IRELT+VVQKRF FPE SVELYAEK RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRCIRELTAVVQKRFGFPEGSVELYAEKGATRGLCAIAQAESLRYKLLGGLAVRR 117
>gi|449017871|dbj|BAM81273.1| 40S ribosomal protein S3 [Cyanidioschyzon merolae strain 10D]
Length = 262
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 109/131 (83%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+S KRKFVADGVFFAEL+E+LTRELAEDGY+GVEVRVTP E+IIRATRTQ VLGEKG
Sbjct: 7 QVSWKRKFVADGVFFAELSELLTRELAEDGYAGVEVRVTPRGHEVIIRATRTQTVLGEKG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIIS 123
RRIRELT++V+KRF FPEN V L+ E+V NRGLCA+AQAESLRYKLLGGLAVRR +
Sbjct: 67 RRIRELTALVEKRFGFPENQVSLFVERVPNRGLCAMAQAESLRYKLLGGLAVRRAAYGVL 126
Query: 124 QILSNKALRSC 134
+ + + C
Sbjct: 127 RFVMESGAKGC 137
>gi|340959617|gb|EGS20798.1| 40S ribosomal protein S3-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 254
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 96/133 (72%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISKKRKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKKRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|70906311|gb|AAZ14891.1| ribosomal protein S3 [Aedes albopictus]
Length = 243
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/134 (73%), Positives = 109/134 (81%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNAVSKKRRFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|157118129|ref|XP_001659022.1| 40S ribosomal protein S3 [Aedes aegypti]
gi|70906313|gb|AAZ14892.1| ribosomal protein S3 [Aedes aegypti]
gi|108875827|gb|EAT40052.1| AAEL008192-PA [Aedes aegypti]
Length = 243
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/134 (73%), Positives = 109/134 (81%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNAVSKKRRFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|389751372|gb|EIM92445.1| ribosomal protein S3 [Stereum hirsutum FP-91666 SS1]
Length = 267
Score = 194 bits (493), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 109/134 (81%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNEFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL A+AQ ESLRYKLLGGLA+RR
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAVAQCESLRYKLLGGLAIRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|403415257|emb|CCM01957.1| predicted protein [Fibroporia radiculosa]
Length = 260
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/134 (72%), Positives = 110/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +QISKKRKFVADGVF AELN+ TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MTSQISKKRKFVADGVFRAELNDFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV +RGL AIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQSRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESNAKGC 134
>gi|430813642|emb|CCJ29017.1| unnamed protein product [Pneumocystis jirovecii]
Length = 412
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/117 (80%), Positives = 101/117 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+A IS FVADGVFFAELNE TREL+ +GYSG EVRVTP RTEIIIRAT TQ+VLG
Sbjct: 165 LANLISLFAMFVADGVFFAELNEFFTRELSAEGYSGTEVRVTPSRTEIIIRATHTQDVLG 224
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELTS++QKRFKFPE SVELYAEKV NRGLCA+AQ ESLRYKLL GLAVRR
Sbjct: 225 EKGRRIRELTSLIQKRFKFPEGSVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRR 281
>gi|302406170|ref|XP_003000921.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102]
gi|261360179|gb|EEY22607.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102]
gi|346971436|gb|EGY14888.1| 40S ribosomal protein S3 [Verticillium dahliae VdLs.17]
Length = 262
Score = 193 bits (491), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|44967154|gb|AAS49565.1| ribosomal protein S3 [Latimeria chalumnae]
Length = 211
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/124 (78%), Positives = 104/124 (83%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKA 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR + + +
Sbjct: 61 AVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 LRSC 134
+ C
Sbjct: 121 AKGC 124
>gi|392588527|gb|EIW77859.1| 40S ribosomal protein S3 [Coniophora puteana RWD-64-598 SS2]
Length = 267
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 110/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE REL+E+GYSG +VRVT RTEIIIRA+ TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNEFFARELSEEGYSGCDVRVTHARTEIIIRASMTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRFKFPEN++ELYAEKV +RGL A+AQAESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTALVQKRFKFPENALELYAEKVQHRGLSAVAQAESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
I + + + C
Sbjct: 121 GILRFIMESGAKGC 134
>gi|170057463|ref|XP_001864493.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167876891|gb|EDS40274.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 250
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/134 (73%), Positives = 109/134 (81%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M +SKKR+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MYNVVSKKRRFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|116207712|ref|XP_001229665.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51]
gi|88183746|gb|EAQ91214.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51]
Length = 260
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|345570572|gb|EGX53393.1| hypothetical protein AOL_s00006g259 [Arthrobotrys oligospora ATCC
24927]
Length = 270
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/132 (71%), Positives = 107/132 (81%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RK VADGVF+AELNE TRELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 5 TAISKRRKAVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGLCA+AQ ESLRYKLL GLAVRR +
Sbjct: 65 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLCAVAQCESLRYKLLNGLAVRRACYGV 124
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 125 LRFIMESGAKGC 136
>gi|310793027|gb|EFQ28488.1| ribosomal protein S3 [Glomerella graminicola M1.001]
Length = 261
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|367049518|ref|XP_003655138.1| 40S ribosomal protein S3 [Thielavia terrestris NRRL 8126]
gi|347002402|gb|AEO68802.1| hypothetical protein THITE_2155431 [Thielavia terrestris NRRL 8126]
Length = 260
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|402221674|gb|EJU01742.1| 40S ribosomal protein S3 [Dacryopinax sp. DJM-731 SS1]
Length = 259
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/133 (73%), Positives = 108/133 (81%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+T ISKKRKFVADGVF AEL E TRELAE+GYSG EVRVT RTEIIIRAT TQ VLGE
Sbjct: 11 STTISKKRKFVADGVFRAELGEFFTRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLGE 70
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
KGRRIRELT++VQKRFKFPENS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRR
Sbjct: 71 KGRRIRELTALVQKRFKFPENSLELYAEKVQNRGLSAVAQCESLRYKLLGGLAVRRACYG 130
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 131 VLRFVMESEAKGC 143
>gi|380470676|emb|CCF47635.1| 40S ribosomal protein S3 [Colletotrichum higginsianum]
Length = 261
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|242218874|ref|XP_002475223.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
gi|220725609|gb|EED79589.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
Length = 262
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/134 (72%), Positives = 109/134 (81%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELN+ TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELNDFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|429856532|gb|ELA31437.1| 40s ribosomal protein s3 [Colletotrichum gloeosporioides Nara gc5]
Length = 259
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|367027792|ref|XP_003663180.1| hypothetical protein MYCTH_2315249 [Myceliophthora thermophila ATCC
42464]
gi|347010449|gb|AEO57935.1| hypothetical protein MYCTH_2315249 [Myceliophthora thermophila ATCC
42464]
Length = 260
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|328862650|gb|EGG11751.1| hypothetical protein MELLADRAFT_70763 [Melampsora larici-populina
98AG31]
Length = 269
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/132 (71%), Positives = 108/132 (81%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AEL+E TREL+E+GYSG EVRVT RTE+IIRAT TQ VLG+K
Sbjct: 2 TTISKRRKFVADGVFYAELSEFFTRELSEEGYSGCEVRVTHARTEVIIRATHTQEVLGQK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELTS+VQKRFKFPE SVELYAEKV RGLCA+AQ ESLRYKLLGGLAVRR +
Sbjct: 62 GRRIRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGV 121
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 122 LRFIMESNAKGC 133
>gi|171686174|ref|XP_001908028.1| hypothetical protein [Podospora anserina S mat+]
gi|170943048|emb|CAP68701.1| unnamed protein product [Podospora anserina S mat+]
Length = 262
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|336268268|ref|XP_003348899.1| 40S ribosomal protein S3 [Sordaria macrospora k-hell]
gi|380094158|emb|CCC08375.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 262
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|164429154|ref|XP_956174.2| 40S ribosomal protein S3 [Neurospora crassa OR74A]
gi|157072430|gb|EAA26938.2| cytoplasmic ribosomal protein subunit S3 [Neurospora crassa OR74A]
gi|336470035|gb|EGO58197.1| cytoplasmic ribosomal protein subunit S3 [Neurospora tetrasperma
FGSC 2508]
gi|350290273|gb|EGZ71487.1| cytoplasmic ribosomal protein subunit S3 [Neurospora tetrasperma
FGSC 2509]
Length = 262
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
TQISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GTQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|407924047|gb|EKG17107.1| Ribosomal protein S3 [Macrophomina phaseolina MS6]
Length = 265
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 108/133 (81%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 6 GSQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 65
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV+NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 66 QGRRIRELTSLIQKRFKFPENSVSLYAAKVSNRGLSAVAQCESLRYKLLNGLAVRRACYG 125
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 126 VLRFIMESGAKGC 138
>gi|298714483|emb|CBJ27505.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 222
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/113 (82%), Positives = 106/113 (93%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRKFVADGVF+AELNE+LT+ELAE+GY+GVEVRVTP+RTEIII ATR QNVLGEKG+
Sbjct: 1 MSKKRKFVADGVFYAELNELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQ 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RIRELTSVVQKRF FP+++VELYAE+V RGLCA QAESL+YKLLGGLAVRR
Sbjct: 61 RIRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRR 113
>gi|388853822|emb|CCF52543.1| probable 40S ribosomal protein S3 [Ustilago hordei]
Length = 258
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 96/133 (72%), Positives = 108/133 (81%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
KGRRIRELT++VQKRFKFPENS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRR
Sbjct: 63 KGRRIRELTALVQKRFKFPENSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 123 VLRFVMESGAKGC 135
>gi|223999667|ref|XP_002289506.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974714|gb|EED93043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 270
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/132 (71%), Positives = 112/132 (84%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+++S KR+FVADGVF+AELNE+LTRELAEDGY+GVEVR TP RTEIIIRAT+TQNVLGEK
Sbjct: 7 SKMSIKRRFVADGVFYAELNELLTRELAEDGYAGVEVRTTPHRTEIIIRATKTQNVLGEK 66
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
G+RIRELTSVVQKRF F E +VELYAE+V NRGLCA AQAESL++KLL GLAVRR +
Sbjct: 67 GQRIRELTSVVQKRFDFAEGAVELYAERVQNRGLCAQAQAESLKFKLLAGLAVRRACYGV 126
Query: 123 SQILSNKALRSC 134
+ + + + C
Sbjct: 127 VRFVMEASAKGC 138
>gi|342874800|gb|EGU76719.1| hypothetical protein FOXB_12740 [Fusarium oxysporum Fo5176]
Length = 260
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GSQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|408397169|gb|EKJ76319.1| hypothetical protein FPSE_03574 [Fusarium pseudograminearum CS3096]
Length = 260
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GSQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|402086493|gb|EJT81391.1| 40S ribosomal protein S3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 263
Score = 192 bits (488), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/137 (70%), Positives = 109/137 (79%), Gaps = 3/137 (2%)
Query: 1 MAT---QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQN 57
MAT QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ
Sbjct: 1 MATPGAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQE 60
Query: 58 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
VLGE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 61 VLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRR 120
Query: 118 YILIISQILSNKALRSC 134
+ + + + C
Sbjct: 121 ACYGVLRFIMESGAKGC 137
>gi|302904072|ref|XP_003048997.1| 40S ribosomal protein S3 [Nectria haematococca mpVI 77-13-4]
gi|256729931|gb|EEU43284.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 260
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 5 GSQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|392571524|gb|EIW64696.1| 40S ribosomal protein S3 [Trametes versicolor FP-101664 SS1]
Length = 261
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 109/134 (81%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELN+ TREL+E+GYSG +VRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSGQISKKRKFVADGVFRAELNDFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRFKFP+NS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTALVQKRFKFPDNSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|393232568|gb|EJD40148.1| 40S ribosomal protein S3 [Auricularia delicata TFB-10046 SS5]
Length = 264
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/134 (70%), Positives = 110/134 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT T+ VLG
Sbjct: 1 MSGQISKKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTREVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
+KGRRIRELT+++QKRFKFPENS+ELYAEKV +RGL A+AQ ESLRYKLLGGLAVRR
Sbjct: 61 DKGRRIRELTALIQKRFKFPENSLELYAEKVMHRGLSAVAQCESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESGAKGC 134
>gi|358056010|dbj|GAA98355.1| hypothetical protein E5Q_05041 [Mixia osmundae IAM 14324]
Length = 270
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 97/134 (72%), Positives = 108/134 (80%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+T ISK+RKFVADGVF+AEL+E TREL+ +GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSTTISKRRKFVADGVFYAELSEFFTRELSSEGYSGCEVRVTRARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTS+VQKRFKF E SVELYAEKV NRGL AIAQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSLVQKRFKFGEGSVELYAEKVQNRGLSAIAQCESLRYKLLGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|28630189|gb|AAN77883.1| ribosomal protein S3 [Myxine glutinosa]
Length = 211
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/124 (76%), Positives = 104/124 (83%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADGVF AELNE LTRELAEDGYSGVE+RVTP RTE+II ATRTQNVLGE+GRRIRELT
Sbjct: 1 FVADGVFKAELNEFLTRELAEDGYSGVEIRVTPSRTEVIILATRTQNVLGEEGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKA 130
SV+QKRF FPE +VELYAEKV NRGLCAIAQ ESLRYKLLGGLAVRR + + +
Sbjct: 61 SVIQKRFDFPEGNVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMENG 120
Query: 131 LRSC 134
+ C
Sbjct: 121 AKGC 124
>gi|354501651|ref|XP_003512903.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 247
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 96/124 (77%), Positives = 102/124 (82%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 15 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 74
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKA 130
+VVQKRF FPE SVELYAEKV RGLC AQAESLRYKLLGGLAVRR + + +
Sbjct: 75 AVVQKRFGFPEGSVELYAEKVATRGLCGSAQAESLRYKLLGGLAVRRACYGVLRFIMESG 134
Query: 131 LRSC 134
+ C
Sbjct: 135 AKGC 138
>gi|443898722|dbj|GAC76056.1| phosphatidylserine decarboxylase [Pseudozyma antarctica T-34]
Length = 252
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 108/133 (81%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
KGRRIRELT++VQKRFKFP+NS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRR
Sbjct: 63 KGRRIRELTALVQKRFKFPDNSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 123 VLRFVMESGAKGC 135
>gi|343429784|emb|CBQ73356.1| probable 40S ribosomal protein S3 [Sporisorium reilianum SRZ2]
Length = 252
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 108/133 (81%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
KGRRIRELT++VQKRFKFP+NS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRR
Sbjct: 63 KGRRIRELTALVQKRFKFPDNSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 123 VLRFVMESGAKGC 135
>gi|340522228|gb|EGR52461.1| 40s ribosomal protein [Trichoderma reesei QM6a]
Length = 264
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 93/133 (69%), Positives = 106/133 (79%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|44967199|gb|AAS49566.1| ribosomal protein S3 [Protopterus dolloi]
Length = 211
Score = 191 bits (486), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/124 (78%), Positives = 103/124 (83%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG KGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGGKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKA 130
+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR + + +
Sbjct: 61 AVVQKRFGFPEASVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 LRSC 134
+ C
Sbjct: 121 AKGC 124
>gi|71017745|ref|XP_759103.1| hypothetical protein UM02956.1 [Ustilago maydis 521]
gi|46098895|gb|EAK84128.1| hypothetical protein UM02956.1 [Ustilago maydis 521]
Length = 239
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 95/133 (71%), Positives = 108/133 (81%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRKFVADGVF AELNE TREL+E+GYSG EVRVT RTEIIIRAT TQ VLG+
Sbjct: 3 SANISKKRKFVADGVFAAELNEFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
KGRRIRELT++VQKRFKFP+NS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRR
Sbjct: 63 KGRRIRELTALVQKRFKFPDNSLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYG 122
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 123 VLRFVMESGAKGC 135
>gi|322709405|gb|EFZ00981.1| cytoplasmic ribosomal protein subunit S3 [Metarhizium anisopliae
ARSEF 23]
Length = 257
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|378725981|gb|EHY52440.1| 40S ribosomal protein S3 [Exophiala dermatitidis NIH/UT8656]
Length = 262
Score = 191 bits (486), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/137 (70%), Positives = 108/137 (78%), Gaps = 3/137 (2%)
Query: 1 MATQ---ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQN 57
M TQ ISKKRKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ
Sbjct: 1 MTTQPGAISKKRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQE 60
Query: 58 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
VLGE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 61 VLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRR 120
Query: 118 YILIISQILSNKALRSC 134
+ + + + C
Sbjct: 121 ACYGVLRFIMESGAKGC 137
>gi|358383594|gb|EHK21258.1| hypothetical protein TRIVIDRAFT_78477 [Trichoderma virens Gv29-8]
Length = 263
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 93/133 (69%), Positives = 106/133 (79%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|320592132|gb|EFX04571.1| 40S ribosomal protein s3 [Grosmannia clavigera kw1407]
Length = 264
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 94/131 (71%), Positives = 106/131 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+G
Sbjct: 7 QISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIIS 123
RRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR +
Sbjct: 67 RRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVL 126
Query: 124 QILSNKALRSC 134
+ + + C
Sbjct: 127 RFIMESGAKGC 137
>gi|451997970|gb|EMD90435.1| hypothetical protein COCHEDRAFT_1157448 [Cochliobolus
heterostrophus C5]
Length = 265
Score = 191 bits (485), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 94/132 (71%), Positives = 106/132 (80%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 TAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR +
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 126 LRFIMESGAKGC 137
>gi|289743349|gb|ADD20422.1| ribosomal protein S3 [Glossina morsitans morsitans]
Length = 263
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 97/134 (72%), Positives = 107/134 (79%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ ISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 23 MSLTISKKRKFVADGMFKAELNEFLTRELAEDGYSGVEVRVTPARTEIIIMATKTQQVLG 82
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRR
Sbjct: 83 EKGRRIRELTAMVQKRFNFEPGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 142
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 143 GVLRFIMESGAKGC 156
>gi|346319548|gb|EGX89149.1| cytoplasmic ribosomal protein subunit S3 [Cordyceps militaris CM01]
Length = 258
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESDAKGC 137
>gi|189188112|ref|XP_001930395.1| 40S ribosomal protein S3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330936377|ref|XP_003305367.1| 40S ribosomal protein S3 [Pyrenophora teres f. teres 0-1]
gi|187972001|gb|EDU39500.1| 40S ribosomal protein S3-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311317666|gb|EFQ86553.1| hypothetical protein PTT_18182 [Pyrenophora teres f. teres 0-1]
Length = 266
Score = 191 bits (485), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 94/132 (71%), Positives = 106/132 (80%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 TAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR +
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 126 LRFIMESGAKGC 137
>gi|451847106|gb|EMD60414.1| hypothetical protein COCSADRAFT_40058 [Cochliobolus sativus ND90Pr]
Length = 265
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/132 (71%), Positives = 106/132 (80%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 TAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR +
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 126 LRFIMESGAKGC 137
>gi|400595104|gb|EJP62914.1| cytoplasmic ribosomal protein subunit S3 [Beauveria bassiana ARSEF
2860]
Length = 257
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESDAKGC 137
>gi|361124160|gb|EHK96273.1| putative 40S ribosomal protein S3 [Glarea lozoyensis 74030]
Length = 263
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 106/133 (79%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
T ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 7 GTAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 66
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 67 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 126
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 127 VLRFIMESGAKGC 139
>gi|358397895|gb|EHK47263.1| hypothetical protein TRIATDRAFT_298935 [Trichoderma atroviride IMI
206040]
Length = 264
Score = 191 bits (484), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/133 (69%), Positives = 106/133 (79%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE
Sbjct: 5 GAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGE 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 65 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|187233664|gb|ACD01096.1| ribosomal protein S1a [Adineta vaga]
Length = 215
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/136 (69%), Positives = 110/136 (80%), Gaps = 2/136 (1%)
Query: 1 MAT--QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNV 58
MAT ISKKRKF+ +GVF AELNE TRELAEDGYSG+E+RVTP RTEIII AT+TQ V
Sbjct: 1 MATTANISKKRKFIREGVFHAELNEFFTRELAEDGYSGLEIRVTPQRTEIIIMATKTQAV 60
Query: 59 LGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY 118
LGEKGRRIRELTSV+QKRF +PENS+EL+A+KV RGLCAIAQAESLRYKL+GGL VRR
Sbjct: 61 LGEKGRRIRELTSVIQKRFGYPENSIELFAQKVVTRGLCAIAQAESLRYKLMGGLPVRRA 120
Query: 119 ILIISQILSNKALRSC 134
+ + + + C
Sbjct: 121 CYGVLRFIMESGAQGC 136
>gi|326521618|dbj|BAK00385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/136 (68%), Positives = 111/136 (81%), Gaps = 2/136 (1%)
Query: 1 MAT--QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNV 58
MAT +SKKRKF+ +GVF AELNE TRELAEDGYSG+E+RVTP RTEIII AT+TQ V
Sbjct: 1 MATTANVSKKRKFIREGVFHAELNEFFTRELAEDGYSGLEIRVTPQRTEIIIMATKTQAV 60
Query: 59 LGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY 118
LGEKGRRIRELTSV+QKRF +PENS+EL+A+KV +RGLCAIAQAESLRYKL+GG VRR
Sbjct: 61 LGEKGRRIRELTSVIQKRFGYPENSIELFAQKVVSRGLCAIAQAESLRYKLMGGFPVRRA 120
Query: 119 ILIISQILSNKALRSC 134
+ + + + + C
Sbjct: 121 CYGVLRFIMDSGAQGC 136
>gi|353240330|emb|CCA72204.1| probable 40S ribosomal protein S3 [Piriformospora indica DSM 11827]
Length = 268
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/134 (72%), Positives = 107/134 (79%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ QISKKRKFVADGVF AEL E RELAE+GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 1 MSAQISKKRKFVADGVFRAELGEFFMRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELTS+VQKRFKFPE S+ELYAEKV +RGL A+AQ ESLRYKLLGGLAVRR
Sbjct: 61 EKGRRIRELTSLVQKRFKFPEGSLELYAEKVLHRGLSAVAQCESLRYKLLGGLAVRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFVMESNAKGC 134
>gi|242785057|ref|XP_002480514.1| 40S ribosomal protein S3 [Talaromyces stipitatus ATCC 10500]
gi|218720661|gb|EED20080.1| 40S ribosomal protein S3, putative [Talaromyces stipitatus ATCC
10500]
Length = 266
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/135 (71%), Positives = 108/135 (80%), Gaps = 2/135 (1%)
Query: 2 ATQ--ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
ATQ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VL
Sbjct: 3 ATQGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVL 62
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
GE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 63 GEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRAC 122
Query: 120 LIISQILSNKALRSC 134
+ + + + C
Sbjct: 123 YGVLRFIMESGAKGC 137
>gi|28630191|gb|AAN77884.1| ribosomal protein S3 [Scyliorhinus canicula]
Length = 211
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/124 (77%), Positives = 102/124 (82%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADG+F AELNE LTR LAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 1 FVADGIFKAELNEFLTRGLAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 60
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKA 130
+VVQKRF FPE VELYAEKV RGLCAIAQAESLRYKLLGGLAVRR + + +
Sbjct: 61 AVVQKRFGFPEGRVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESG 120
Query: 131 LRSC 134
+ C
Sbjct: 121 AKGC 124
>gi|384494103|gb|EIE84594.1| 40S ribosomal protein [Rhizopus delemar RA 99-880]
Length = 131
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/114 (83%), Positives = 104/114 (91%), Gaps = 1/114 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A QISKKRK VADGVF+AELNE LTRELAE GY+GVEVRVTP RTEIIIRAT TQNVLGE
Sbjct: 3 AVQISKKRK-VADGVFYAELNEFLTRELAEAGYAGVEVRVTPARTEIIIRATHTQNVLGE 61
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV 115
KGRRIRELT++VQKRFKFPEN+VELYAE+V NRGLCAIAQ ES+++KLL GLA
Sbjct: 62 KGRRIRELTTLVQKRFKFPENAVELYAERVQNRGLCAIAQCESVKFKLLNGLAC 115
>gi|154301908|ref|XP_001551365.1| 40S ribosomal protein S3 [Botryotinia fuckeliana B05.10]
gi|347836345|emb|CCD50917.1| similar to 40S ribosomal protein S3 [Botryotinia fuckeliana]
Length = 263
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 10 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 69
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 70 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 129
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 130 FIMESGAKGC 139
>gi|70990926|ref|XP_750312.1| 40S ribosomal protein S3 [Aspergillus fumigatus Af293]
gi|119496667|ref|XP_001265107.1| 40S ribosomal protein S3 [Neosartorya fischeri NRRL 181]
gi|66847944|gb|EAL88274.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus Af293]
gi|119413269|gb|EAW23210.1| 40S ribosomal protein S3, putative [Neosartorya fischeri NRRL 181]
gi|159130785|gb|EDP55898.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus A1163]
Length = 266
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 128 FIMESGAKGC 137
>gi|145254885|ref|XP_001398791.1| 40S ribosomal protein S3 [Aspergillus niger CBS 513.88]
gi|134084376|emb|CAK48715.1| unnamed protein product [Aspergillus niger]
gi|350630615|gb|EHA18987.1| hypothetical protein ASPNIDRAFT_202416 [Aspergillus niger ATCC
1015]
gi|358366728|dbj|GAA83348.1| 40S ribosomal protein S3 [Aspergillus kawachii IFO 4308]
Length = 266
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 128 FIMESGAKGC 137
>gi|121702671|ref|XP_001269600.1| 40S ribosomal protein S3 [Aspergillus clavatus NRRL 1]
gi|119397743|gb|EAW08174.1| 40S ribosomal protein S3, putative [Aspergillus clavatus NRRL 1]
Length = 267
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 128 FIMESGAKGC 137
>gi|269115422|gb|ACZ26288.1| putative ribosomal protein S3 [Mayetiola destructor]
Length = 250
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 107/134 (79%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFV +G+F AELNE LTR+LAEDGYSGVE+RVTP RTEIII AT+T NVLG
Sbjct: 1 MALPISKKRKFVLNGIFKAELNEFLTRQLAEDGYSGVEIRVTPTRTEIIIMATKTLNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL GGLAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|156051430|ref|XP_001591676.1| 40S ribosomal protein S3 [Sclerotinia sclerotiorum 1980 UF-70]
gi|154704900|gb|EDO04639.1| ribosomal protein S3 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 263
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 10 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 69
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 70 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 129
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 130 FIMESGAKGC 139
>gi|396493922|ref|XP_003844188.1| similar to 40S ribosomal protein S3 [Leptosphaeria maculans JN3]
gi|312220768|emb|CBY00709.1| similar to 40S ribosomal protein S3 [Leptosphaeria maculans JN3]
Length = 264
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/132 (70%), Positives = 106/132 (80%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+
Sbjct: 6 SAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQ 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR +
Sbjct: 66 GRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGV 125
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 126 LRFIMESGAKGC 137
>gi|212527956|ref|XP_002144135.1| 40S ribosomal protein S3 [Talaromyces marneffei ATCC 18224]
gi|210073533|gb|EEA27620.1| 40S ribosomal protein S3, putative [Talaromyces marneffei ATCC
18224]
Length = 266
Score = 189 bits (481), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/135 (71%), Positives = 108/135 (80%), Gaps = 2/135 (1%)
Query: 2 ATQ--ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
ATQ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VL
Sbjct: 3 ATQGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVL 62
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
GE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 63 GEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRAC 122
Query: 120 LIISQILSNKALRSC 134
+ + + + C
Sbjct: 123 YGVLRFIMESGAKGC 137
>gi|325087729|gb|EGC41039.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H88]
Length = 1089
Score = 189 bits (481), Expect = 3e-46, Method: Composition-based stats.
Identities = 94/133 (70%), Positives = 106/133 (79%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 823 AGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 882
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 883 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 942
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 943 VLRFIMESGAKGC 955
>gi|169764753|ref|XP_001816848.1| 40S ribosomal protein S3 [Aspergillus oryzae RIB40]
gi|238503978|ref|XP_002383221.1| 40S ribosomal protein S3 [Aspergillus flavus NRRL3357]
gi|83764702|dbj|BAE54846.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220690692|gb|EED47041.1| 40S ribosomal protein S3, putative [Aspergillus flavus NRRL3357]
gi|391863281|gb|EIT72592.1| 40S ribosomal protein [Aspergillus oryzae 3.042]
Length = 266
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 128 FIMESGAKGC 137
>gi|119187711|ref|XP_001244462.1| 40S ribosomal protein S3 [Coccidioides immitis RS]
gi|303316826|ref|XP_003068415.1| 40S ribosomal protein S3 [Coccidioides posadasii C735 delta SOWgp]
gi|240108096|gb|EER26270.1| 40S ribosomal protein S3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320038258|gb|EFW20194.1| 40S ribosomal protein S3 [Coccidioides posadasii str. Silveira]
gi|392871183|gb|EAS33062.2| 40S ribosomal protein [Coccidioides immitis RS]
Length = 263
Score = 189 bits (481), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 128 FIMESGAKGC 137
>gi|169616949|ref|XP_001801889.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15]
gi|111059574|gb|EAT80694.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15]
Length = 266
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/137 (70%), Positives = 108/137 (78%), Gaps = 3/137 (2%)
Query: 1 MATQ---ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQN 57
MAT ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ
Sbjct: 1 MATTQGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQE 60
Query: 58 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
VLGE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 61 VLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRR 120
Query: 118 YILIISQILSNKALRSC 134
+ + + + C
Sbjct: 121 ACYGVLRFIMESGAKGC 137
>gi|258576671|ref|XP_002542517.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704]
gi|237902783|gb|EEP77184.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704]
Length = 263
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 128 FIMESGAKGC 137
>gi|226289773|gb|EEH45257.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb18]
Length = 270
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 128 FIMESGAKGC 137
>gi|302508557|ref|XP_003016239.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371]
gi|302657285|ref|XP_003020367.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517]
gi|291179808|gb|EFE35594.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371]
gi|291184196|gb|EFE39749.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517]
Length = 266
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 129 FIMESGAKGC 138
>gi|327307562|ref|XP_003238472.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892]
gi|326458728|gb|EGD84181.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892]
gi|326470843|gb|EGD94852.1| 40S ribosomal protein S3 [Trichophyton tonsurans CBS 112818]
gi|326478407|gb|EGE02417.1| 40S ribosomal protein S3 [Trichophyton equinum CBS 127.97]
Length = 266
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 129 FIMESGAKGC 138
>gi|296825392|ref|XP_002850808.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480]
gi|238838362|gb|EEQ28024.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480]
Length = 266
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 129 FIMESGAKGC 138
>gi|389625837|ref|XP_003710572.1| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15]
gi|351650101|gb|EHA57960.1| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15]
gi|440467710|gb|ELQ36909.1| 40S ribosomal protein S3 [Magnaporthe oryzae Y34]
gi|440480625|gb|ELQ61280.1| 40S ribosomal protein S3 [Magnaporthe oryzae P131]
Length = 262
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/133 (69%), Positives = 106/133 (79%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A QISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 6 AAQISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 65
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFP +SV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 66 QGRRIRELTSLIQKRFKFPADSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 125
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 126 VLRFIMESGAKGC 138
>gi|261197469|ref|XP_002625137.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081]
gi|239595767|gb|EEQ78348.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081]
gi|239606762|gb|EEQ83749.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis ER-3]
gi|327351227|gb|EGE80084.1| hypothetical protein BDDG_03025 [Ajellomyces dermatitidis ATCC
18188]
Length = 270
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 128 FIMESGAKGC 137
>gi|315055209|ref|XP_003176979.1| 40S ribosomal protein S3 [Arthroderma gypseum CBS 118893]
gi|311338825|gb|EFQ98027.1| 30S ribosomal protein S14p/S29e [Arthroderma gypseum CBS 118893]
Length = 266
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 9 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 69 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 128
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 129 FIMESGAKGC 138
>gi|195053458|ref|XP_001993643.1| GH20000 [Drosophila grimshawi]
gi|193895513|gb|EDV94379.1| GH20000 [Drosophila grimshawi]
Length = 246
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 106/134 (79%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 3 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRR
Sbjct: 63 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 122
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 123 GVLRFIMESGAKGC 136
>gi|335345828|gb|AEH41494.1| 40S ribosomal protein S3 [Endocarpon pusillum]
Length = 264
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 128 FIMESGAKGC 137
>gi|46122111|ref|XP_385609.1| hypothetical protein FG05433.1 [Gibberella zeae PH-1]
Length = 255
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 3 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 62
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 63 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 122
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 123 FIMESGAKGC 132
>gi|255942573|ref|XP_002562055.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586788|emb|CAP94435.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 264
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 128 FIMESGAKGC 137
>gi|295670700|ref|XP_002795897.1| 40S ribosomal protein S3 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284030|gb|EEH39596.1| 40S ribosomal protein S3 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 270
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 128 FIMESGAKGC 137
>gi|332016343|gb|EGI57256.1| 40S ribosomal protein S3 [Acromyrmex echinatior]
Length = 242
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 108/132 (81%), Gaps = 3/132 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
RIRELTSVVQKRF F P+N VELYAEKV RGLCAIAQAESLRYKL+GGLAVRR +
Sbjct: 66 RIRELTSVVQKRFNFKEPQN-VELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 124
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 125 LRFIMESGAKGC 136
>gi|195390345|ref|XP_002053829.1| RpS3 [Drosophila virilis]
gi|194151915|gb|EDW67349.1| RpS3 [Drosophila virilis]
Length = 246
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 106/134 (79%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 3 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRR
Sbjct: 63 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 122
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 123 GVLRFIMESGAKGC 136
>gi|225556722|gb|EEH05010.1| 40S ribosomal protein S3 [Ajellomyces capsulatus G186AR]
Length = 271
Score = 189 bits (480), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 128 FIMESGAKGC 137
>gi|307167583|gb|EFN61127.1| 40S ribosomal protein S3 [Camponotus floridanus]
Length = 242
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 108/132 (81%), Gaps = 3/132 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
RIRELTSVVQKRF F P+N VELYAEKV RGLCAIAQAESLRYKL+GGLAVRR +
Sbjct: 66 RIRELTSVVQKRFNFKEPQN-VELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 124
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 125 LRFIMESGAKGC 136
>gi|18496083|emb|CAD12886.1| ribosomal protein S3 [Drosophila virilis]
Length = 244
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 106/134 (79%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 1 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRR
Sbjct: 61 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|293333308|ref|NP_001169131.1| uncharacterized protein LOC100382976 [Zea mays]
gi|223975097|gb|ACN31736.1| unknown [Zea mays]
Length = 266
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/135 (71%), Positives = 107/135 (79%), Gaps = 2/135 (1%)
Query: 2 ATQ--ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
ATQ ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VL
Sbjct: 3 ATQGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVL 62
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
GE GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 63 GENGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRAC 122
Query: 120 LIISQILSNKALRSC 134
+ + + + C
Sbjct: 123 YGVLRFIMESGAKGC 137
>gi|195113493|ref|XP_002001302.1| GI22047 [Drosophila mojavensis]
gi|193917896|gb|EDW16763.1| GI22047 [Drosophila mojavensis]
Length = 246
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 106/134 (79%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 3 MNLNISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRR
Sbjct: 63 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 122
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 123 GVLRFIMESGAKGC 136
>gi|425768995|gb|EKV07505.1| hypothetical protein PDIP_73820 [Penicillium digitatum Pd1]
gi|425770579|gb|EKV09048.1| hypothetical protein PDIG_64480 [Penicillium digitatum PHI26]
Length = 264
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II+RAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 128 FIMESGAKGC 137
>gi|332024589|gb|EGI64787.1| 40S ribosomal protein S3 [Acromyrmex echinatior]
Length = 242
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 108/132 (81%), Gaps = 3/132 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
RIRELTSVVQKRF F P+N VELYAEKV RGLCAIAQAESLRYKL+GGLAVRR +
Sbjct: 66 RIRELTSVVQKRFNFKEPQN-VELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 124
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 125 LRFIMESGAKGC 136
>gi|440639340|gb|ELR09259.1| small subunit ribosomal protein S3e [Geomyces destructans 20631-21]
Length = 262
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKF+ADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 10 ISKRRKFIADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 69
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 70 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 129
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 130 FIMESGAKGC 139
>gi|195452576|ref|XP_002073414.1| GK14111 [Drosophila willistoni]
gi|194169499|gb|EDW84400.1| GK14111 [Drosophila willistoni]
Length = 244
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 106/134 (79%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLG
Sbjct: 1 MNLTISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRR
Sbjct: 61 EKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVLRFIMESGAKGC 134
>gi|154284746|ref|XP_001543168.1| 40S ribosomal protein S3 [Ajellomyces capsulatus NAm1]
gi|150406809|gb|EDN02350.1| hypothetical protein HCAG_00214 [Ajellomyces capsulatus NAm1]
Length = 239
Score = 189 bits (479), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 68 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 127
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 128 FIMESGAKGC 137
>gi|340710430|ref|XP_003393793.1| PREDICTED: 40S ribosomal protein S3-like [Bombus terrestris]
Length = 242
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 97/131 (74%), Positives = 107/131 (81%), Gaps = 1/131 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQNVLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQNVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIIS 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRR +
Sbjct: 66 RIRELTSVVQKRFNFKEAQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 QILSNKALRSC 134
+ + + C
Sbjct: 126 RFIMESGAKGC 136
>gi|322783274|gb|EFZ10858.1| hypothetical protein SINV_09070 [Solenopsis invicta]
Length = 257
Score = 188 bits (478), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 108/132 (81%), Gaps = 3/132 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 21 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 80
Query: 65 RIRELTSVVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
RIRELTSVVQKRF F P+N VELYAEKV RGLCAIAQAESLRYKL+GGLAVRR +
Sbjct: 81 RIRELTSVVQKRFNFKEPQN-VELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 139
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 140 LRFIMESGAKGC 151
>gi|402244315|emb|CBW52775.1| 40S ribosomal protein S3 [Polytomella sp. Pringsheim 198.80]
Length = 225
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/132 (72%), Positives = 112/132 (84%), Gaps = 2/132 (1%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
QISK +KFV DGVF AELNE+LTRELAEDGYSGVEVR++PVRTEIIIRATRTQNVLGE+
Sbjct: 14 AQISKAKKFVRDGVFRAELNELLTRELAEDGYSGVEVRLSPVRTEIIIRATRTQNVLGEQ 73
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
GRRIRELTSV+QKRFK ++V+L+AE+V+ RGLCAIAQAESLRYKLLGGLAVRR +
Sbjct: 74 GRRIRELTSVIQKRFKI--DNVQLFAEEVSARGLCAIAQAESLRYKLLGGLAVRRACYGV 131
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 132 LRYVMESGAKGC 143
>gi|354473311|ref|XP_003498879.1| PREDICTED: 40S ribosomal protein S3-like [Cricetulus griseus]
Length = 240
Score = 188 bits (478), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 99/134 (73%), Positives = 105/134 (78%), Gaps = 3/134 (2%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRE D Y GVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRE---DSYLGVEVRVTPTRTEIIILATRTQNVLG 57
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKG RIRELT+VVQKRF FPE SVELYAEKV R LCAIAQAESLRYKLLGGLAVR
Sbjct: 58 EKGPRIRELTAVVQKRFGFPEGSVELYAEKVATRRLCAIAQAESLRYKLLGGLAVRSACY 117
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 118 GVLRFIMESGAKGC 131
>gi|240281578|gb|EER45081.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H143]
Length = 1054
Score = 188 bits (477), Expect = 7e-46, Method: Composition-based stats.
Identities = 94/133 (70%), Positives = 106/133 (79%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE
Sbjct: 788 AGAISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGE 847
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR
Sbjct: 848 QGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYG 907
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 908 VLRFIMESGAKGC 920
>gi|125772881|ref|XP_001357699.1| GA19858 [Drosophila pseudoobscura pseudoobscura]
gi|194745943|ref|XP_001955444.1| GF16244 [Drosophila ananassae]
gi|195158647|ref|XP_002020197.1| GL13632 [Drosophila persimilis]
gi|54637431|gb|EAL26833.1| GA19858 [Drosophila pseudoobscura pseudoobscura]
gi|190628481|gb|EDV44005.1| GF16244 [Drosophila ananassae]
gi|194116966|gb|EDW39009.1| GL13632 [Drosophila persimilis]
Length = 246
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRR + +
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 127 FIMESGAKGC 136
>gi|409083492|gb|EKM83849.1| hypothetical protein AGABI1DRAFT_32206 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 673
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 95/128 (74%), Positives = 104/128 (81%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
KKRKFVADGVF AELNE TRELAE+GYSG +VRVT RTEIIIRAT TQ VLGEKGRRI
Sbjct: 415 KKRKFVADGVFRAELNEFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLGEKGRRI 474
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQIL 126
RELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRYKLLGGLAVRR + + +
Sbjct: 475 RELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFV 534
Query: 127 SNKALRSC 134
+ C
Sbjct: 535 MESGAKGC 542
>gi|307207014|gb|EFN84837.1| 40S ribosomal protein S3 [Harpegnathos saltator]
Length = 242
Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 108/132 (81%), Gaps = 3/132 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTRELAEDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFRAELNEFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKF--PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
RIRELTSVVQKRF F P+N VELYAEKV RGLCAIAQAESLRYKL+GGLAVRR +
Sbjct: 66 RIRELTSVVQKRFNFKEPQN-VELYAEKVAVRGLCAIAQAESLRYKLIGGLAVRRACYGV 124
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 125 LRFIMESGAKGC 136
>gi|384483178|gb|EIE75358.1| 40S ribosomal protein S3 [Rhizopus delemar RA 99-880]
Length = 231
Score = 188 bits (477), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/123 (73%), Positives = 104/123 (84%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
VADGVF+AELNE LTRELAE GY+GVEVRVTP RTEIIIRAT TQNVLGEKGRRIRELT+
Sbjct: 4 VADGVFYAELNEFLTRELAEAGYAGVEVRVTPARTEIIIRATHTQNVLGEKGRRIRELTT 63
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKAL 131
+VQKRFKFPEN+VELYAE+V NRGLCAIAQ ES+++KLL GLAVRR + + +
Sbjct: 64 LVQKRFKFPENAVELYAERVQNRGLCAIAQCESVKFKLLNGLAVRRACYGVIRFVMESGA 123
Query: 132 RSC 134
+ C
Sbjct: 124 KGC 126
>gi|195331295|ref|XP_002032338.1| GM26502 [Drosophila sechellia]
gi|195573126|ref|XP_002104546.1| GD21014 [Drosophila simulans]
gi|194121281|gb|EDW43324.1| GM26502 [Drosophila sechellia]
gi|194200473|gb|EDX14049.1| GD21014 [Drosophila simulans]
Length = 246
Score = 187 bits (476), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 106/130 (81%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT++VQKRF F +ELYAEKV +RGLCAIAQAESLRYKL GGLAVRR + +
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVASRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 127 YIMESGAKGC 136
>gi|195502880|ref|XP_002098418.1| RpS3 [Drosophila yakuba]
gi|194184519|gb|EDW98130.1| RpS3 [Drosophila yakuba]
Length = 246
Score = 187 bits (476), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRR + +
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 127 YIMESGAKGC 136
>gi|38048231|gb|AAR10018.1| similar to Drosophila melanogaster RpS3, partial [Drosophila
yakuba]
Length = 215
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRR + +
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 127 YIMESGAKGC 136
>gi|183398092|gb|ACC62506.1| ribosomal protein S3 (predicted) [Rhinolophus ferrumequinum]
Length = 163
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/117 (80%), Positives = 101/117 (86%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQISKK KFV DG+F A+ E LTRELAEDGYSGVEVR+T RTEIII ATRTQNVLG
Sbjct: 1 MATQISKKWKFVVDGIFKAQWYEFLTRELAEDGYSGVEVRLTLTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKG+ IRELT+VVQKRF FPE+SVELYAEKV R LCAI QAESL +KLLGGLAVRR
Sbjct: 61 EKGQSIRELTAVVQKRFGFPESSVELYAEKVATRSLCAIGQAESLHHKLLGGLAVRR 117
>gi|312380148|gb|EFR26232.1| hypothetical protein AND_07881 [Anopheles darlingi]
Length = 278
Score = 187 bits (475), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/124 (76%), Positives = 102/124 (82%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 46 FVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELT 105
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKA 130
SVVQKRF F SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRR + + +
Sbjct: 106 SVVQKRFGFAPGSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 165
Query: 131 LRSC 134
+ C
Sbjct: 166 AKGC 169
>gi|17136324|ref|NP_476632.1| ribosomal protein S3 [Drosophila melanogaster]
gi|548856|sp|Q06559.1|RS3_DROME RecName: Full=40S ribosomal protein S3
gi|290275|gb|AAA28875.1| ribosomal protein S3/AP endonuclease DNA repair protein [Drosophila
melanogaster]
gi|7300992|gb|AAF56129.1| ribosomal protein S3 [Drosophila melanogaster]
gi|21430306|gb|AAM50831.1| LD47488p [Drosophila melanogaster]
gi|220950134|gb|ACL87610.1| RpS3-PA [synthetic construct]
gi|220959146|gb|ACL92116.1| RpS3-PA [synthetic construct]
gi|346426335|gb|AEO27696.1| RpS3-PA [Drosophila melanogaster]
Length = 246
Score = 187 bits (474), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRR + +
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 127 YIMESGAKGC 136
>gi|324513448|gb|ADY45526.1| 40S ribosomal protein S3 [Ascaris suum]
Length = 249
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/133 (70%), Positives = 107/133 (80%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A QI+KKRK V DGVF AELN L +ELAEDGYSGVEVR TP R E+II ATRTQ+VLGE
Sbjct: 4 AQQITKKRKAVQDGVFKAELNNFLMKELAEDGYSGVEVRRTPARAEVIIMATRTQSVLGE 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+GRRIRELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRR
Sbjct: 64 RGRRIRELTSVVQKRFGFAEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYG 123
Query: 122 ISQILSNKALRSC 134
+ + + + + C
Sbjct: 124 VLRFIMESSAQGC 136
>gi|340710439|ref|XP_003393797.1| PREDICTED: 40S ribosomal protein S3-like [Bombus terrestris]
Length = 242
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/131 (73%), Positives = 107/131 (81%), Gaps = 1/131 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIIS 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRR +
Sbjct: 66 RIRELTSVVQKRFNFKEAQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 QILSNKALRSC 134
+ + + C
Sbjct: 126 RFIMESGAKGC 136
>gi|85857570|gb|ABC86320.1| IP15838p [Drosophila melanogaster]
Length = 253
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 14 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 73
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRR + +
Sbjct: 74 RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLR 133
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 134 YIMESGAKGC 143
>gi|194910452|ref|XP_001982149.1| GG11202 [Drosophila erecta]
gi|190656787|gb|EDV54019.1| GG11202 [Drosophila erecta]
Length = 246
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/130 (72%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT++VQKRF F +ELYAEKV RG+CAIAQAESLRYKL GGLAVRR + +
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGICAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 127 YIMESGAKGC 136
>gi|350427313|ref|XP_003494719.1| PREDICTED: 40S ribosomal protein S3-like [Bombus impatiens]
Length = 242
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/131 (73%), Positives = 107/131 (81%), Gaps = 1/131 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPE-NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIIS 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRR +
Sbjct: 66 RIRELTSVVQKRFNFKEAQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 QILSNKALRSC 134
+ + + C
Sbjct: 126 RFIMESGAKGC 136
>gi|383851993|ref|XP_003701515.1| PREDICTED: 40S ribosomal protein S3-like [Megachile rotundata]
Length = 242
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/131 (73%), Positives = 107/131 (81%), Gaps = 1/131 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPEN-SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIIS 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRR +
Sbjct: 66 RIRELTSVVQKRFNFKETQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 QILSNKALRSC 134
+ + + C
Sbjct: 126 RFIMESGAKGC 136
>gi|157118131|ref|XP_001659023.1| 40S ribosomal protein S3 [Aedes aegypti]
gi|403182936|gb|EJY57732.1| AAEL008192-PB [Aedes aegypti]
Length = 256
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 104/126 (82%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
R+FVA+G+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRE
Sbjct: 22 RQFVANGMFRAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRE 81
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSN 128
LT+VVQKRF F +VELYAEKV RGLCAIAQAESLRYKL+GGLAVRR + + +
Sbjct: 82 LTAVVQKRFGFAPGTVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 141
Query: 129 KALRSC 134
+ C
Sbjct: 142 SGAKGC 147
>gi|38047525|gb|AAR09665.1| similar to Drosophila melanogaster RpS3, partial [Drosophila
yakuba]
Length = 172
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/130 (72%), Positives = 104/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVR TP RTEIII AT+TQ VLGEKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRATPSRTEIIIMATKTQQVLGEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRR + +
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLR 126
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 127 YIMESGAKGC 136
>gi|66504343|ref|XP_623731.1| PREDICTED: 40S ribosomal protein S3 [Apis mellifera]
gi|380026164|ref|XP_003696828.1| PREDICTED: 40S ribosomal protein S3-like [Apis florea]
Length = 242
Score = 186 bits (473), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/131 (73%), Positives = 107/131 (81%), Gaps = 1/131 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGVF AELNE LTREL+EDGYSGVEVRVTP RTEII+ AT TQ+VLGEKGR
Sbjct: 6 ISKKRKFVGDGVFKAELNEFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGR 65
Query: 65 RIRELTSVVQKRFKFPEN-SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIIS 123
RIRELTSVVQKRF F E ++ELYAEKV RGLCAIAQAESLR+KL+GGLAVRR +
Sbjct: 66 RIRELTSVVQKRFNFKETQNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVL 125
Query: 124 QILSNKALRSC 134
+ + + C
Sbjct: 126 RFIMESGAKGC 136
>gi|219114717|ref|XP_002178154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409889|gb|EEC49819.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 253
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 107/130 (82%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S KRKFVADGVF+AELNE+LT ELAE+GY+GVEVR TP RTE+IIRATRTQNVLGE R
Sbjct: 1 MSVKRKFVADGVFYAELNELLTAELAEEGYAGVEVRTTPHRTELIIRATRTQNVLGENNR 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTSVVQKRF F + +VELYAE+V NRGLCA AQAESL++KLLGGLAVRR + +
Sbjct: 61 RIRELTSVVQKRFNFADGAVELYAERVQNRGLCAQAQAESLKFKLLGGLAVRRACYGVVR 120
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 121 FVMEAQAKGC 130
>gi|359492651|ref|XP_003634450.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-1-like
[Vitis vinifera]
Length = 246
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/122 (77%), Positives = 105/122 (86%), Gaps = 2/122 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M TQ+SKKRKF DGVFFA LNEVLTREL E+GYSG EVRVTP+ TEIIIRAT+T NVLG
Sbjct: 1 MVTQMSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGG--LAVRRY 118
EKG++I+ELTSVVQKRF+F ENSVEL AEKVNNRG AIAQAESLRYKLLGG V R+
Sbjct: 61 EKGKKIKELTSVVQKRFEFLENSVELCAEKVNNRGFYAIAQAESLRYKLLGGXCYGVLRF 120
Query: 119 IL 120
++
Sbjct: 121 VM 122
>gi|401881615|gb|EJT45911.1| ribosomal protein S3 [Trichosporon asahii var. asahii CBS 2479]
gi|406702723|gb|EKD05674.1| ribosomal protein S3 [Trichosporon asahii var. asahii CBS 8904]
Length = 248
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 92/134 (68%), Positives = 107/134 (79%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+A Q+SKKRKFVADGVF AEL E TRELAE+GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 3 VAHQVSKKRKFVADGVFQAELGEFFTRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLG 62
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
+GRRIREL ++V+KRF+FPENS+ELYAEKV RGL A+AQAESLRYKLLGGLA+RR
Sbjct: 63 HQGRRIRELKALVEKRFRFPENSLELYAEKVQYRGLSAVAQAESLRYKLLGGLAMRRACY 122
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 123 GVLRYVMESGAKGC 136
>gi|399216964|emb|CCF73651.1| unnamed protein product [Babesia microti strain RI]
Length = 218
Score = 185 bits (469), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 90/115 (78%), Positives = 102/115 (88%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
QISKK KF+ DG+F AELNE L+R LAEDGYSGVEVR TPV+TE+IIRATRT+ VLGEK
Sbjct: 4 AQISKKCKFINDGIFHAELNEFLSRSLAEDGYSGVEVRATPVKTEVIIRATRTREVLGEK 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
GRRIRELTS+VQKRF F +SVELYAE++ +RGLCA+AQAESLRYKLL GLAVRR
Sbjct: 64 GRRIRELTSLVQKRFGFAPDSVELYAERIEHRGLCAMAQAESLRYKLLKGLAVRR 118
>gi|221488638|gb|EEE26852.1| 40S ribosomal protein S3, putative [Toxoplasma gondii GT1]
Length = 255
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/131 (70%), Positives = 106/131 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q KKRKFV DGVF AELNE L+ L+EDGYSGVEVRVTP+RTEIIIRATRT+ VLG+KG
Sbjct: 26 QTCKKRKFVKDGVFQAELNEFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKG 85
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIIS 123
RRIRELTSVVQKRF F +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRR +
Sbjct: 86 RRIRELTSVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVL 145
Query: 124 QILSNKALRSC 134
+ + + C
Sbjct: 146 RHIMESGAKGC 156
>gi|66362866|ref|XP_628399.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa
II]
gi|46229434|gb|EAK90252.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa
II]
gi|323508759|dbj|BAJ77273.1| cgd7_2250 [Cryptosporidium parvum]
Length = 221
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/135 (68%), Positives = 110/135 (81%), Gaps = 1/135 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MA Q ISKKRKF+ DGVF AELNE L+ LAEDGY+GVEVRVTP++TEIIIRATRT+ VL
Sbjct: 1 MAPQLISKKRKFINDGVFEAELNEFLSCTLAEDGYAGVEVRVTPIKTEIIIRATRTREVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
G KGRRIRELTS++QKRF FPE SVEL+AE++ NRGLCA+AQAESLRYKLL G+AVRR
Sbjct: 61 GVKGRRIRELTSLIQKRFNFPEGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRAC 120
Query: 120 LIISQILSNKALRSC 134
+ + + + C
Sbjct: 121 YGVLRHVMESGAKGC 135
>gi|67614912|ref|XP_667397.1| ribosomal protein [Cryptosporidium hominis TU502]
gi|54658527|gb|EAL37164.1| ribosomal protein [Cryptosporidium hominis]
Length = 221
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/135 (68%), Positives = 110/135 (81%), Gaps = 1/135 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MA Q ISKKRKF+ DGVF AELNE L+ LAEDGY+GVEVRVTP++TEIIIRATRT+ VL
Sbjct: 1 MAPQLISKKRKFINDGVFEAELNEFLSCTLAEDGYAGVEVRVTPIKTEIIIRATRTREVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
G KGRRIRELTS++QKRF FPE SVEL+AE++ NRGLCA+AQAESLRYKLL G+AVRR
Sbjct: 61 GVKGRRIRELTSLIQKRFNFPEGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRAC 120
Query: 120 LIISQILSNKALRSC 134
+ + + + C
Sbjct: 121 YGVLRHVMESGAKGC 135
>gi|209879906|ref|XP_002141393.1| 40S ribosomal protein S3 [Cryptosporidium muris RN66]
gi|209556999|gb|EEA07044.1| 40S ribosomal protein S3, putative [Cryptosporidium muris RN66]
Length = 221
Score = 183 bits (464), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/135 (70%), Positives = 109/135 (80%), Gaps = 1/135 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MA Q ISKKRKFV DGVF AELNE L+ LAEDGY+GVEVRVTP+RTEIIIRATRT+ VL
Sbjct: 1 MAPQVISKKRKFVNDGVFEAELNEFLSCTLAEDGYAGVEVRVTPIRTEIIIRATRTREVL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
G KGRRIRELTS+VQKRF FP SVEL+AE++ NRGLCA+AQAESLRYKLL G+AVRR
Sbjct: 61 GVKGRRIRELTSLVQKRFNFPAGSVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRAC 120
Query: 120 LIISQILSNKALRSC 134
+ + + + C
Sbjct: 121 YGVLRHVMESGAKGC 135
>gi|429329723|gb|AFZ81482.1| 40S ribosomal protein S3, putative [Babesia equi]
Length = 218
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/129 (70%), Positives = 105/129 (81%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SK++KF+ DGVF AELNE L R LAEDGYSGVE+R+TPVRTEIIIRATRT+ VLGEK RR
Sbjct: 8 SKQKKFINDGVFNAELNEFLARTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 67
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQI 125
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLAVRR + +
Sbjct: 68 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAVRRAAYGVLRH 127
Query: 126 LSNKALRSC 134
+ + C
Sbjct: 128 IMESGAKGC 136
>gi|388579652|gb|EIM19973.1| 40S ribosomal protein S3 [Wallemia sebi CBS 633.66]
Length = 244
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/131 (70%), Positives = 104/131 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SK RK V DGVF AEL E TREL+E+G+SG EVRVT RTEIIIRAT TQ VLGEKG
Sbjct: 7 QLSKSRKIVQDGVFQAELIEFFTRELSEEGFSGCEVRVTHARTEIIIRATHTQEVLGEKG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIIS 123
RRIRELT++VQKRFKFPENS+ELYAEKV NRGL A+AQ ESLRYKLLGGLAVRR +
Sbjct: 67 RRIRELTALVQKRFKFPENSLELYAEKVQNRGLSAVAQCESLRYKLLGGLAVRRACYGVV 126
Query: 124 QILSNKALRSC 134
+ + + C
Sbjct: 127 RFIMESGAKGC 137
>gi|349803955|gb|AEQ17450.1| putative ribosomal protein s3 [Hymenochirus curtipes]
Length = 235
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/134 (71%), Positives = 102/134 (76%), Gaps = 11/134 (8%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQ LAVRR
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQ-----------LAVRRACY 109
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 110 GVLRFIMESGAKGC 123
>gi|401408051|ref|XP_003883474.1| SSU ribosomal protein S3P, related [Neospora caninum Liverpool]
gi|325117891|emb|CBZ53442.1| SSU ribosomal protein S3P, related [Neospora caninum Liverpool]
Length = 235
Score = 182 bits (462), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/128 (71%), Positives = 105/128 (82%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
KKRKFV DGVF AELNE L+ L+EDGYSGVEVRVTP+RTEIIIRATRT+ VLG+KGRRI
Sbjct: 9 KKRKFVKDGVFQAELNEFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKGRRI 68
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQIL 126
RELTSVVQKRF F +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRR + + +
Sbjct: 69 RELTSVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHI 128
Query: 127 SNKALRSC 134
+ C
Sbjct: 129 MESGAKGC 136
>gi|237837605|ref|XP_002368100.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49]
gi|211965764|gb|EEB00960.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49]
gi|221509134|gb|EEE34703.1| 40S ribosomal protein S3, putative [Toxoplasma gondii VEG]
Length = 235
Score = 182 bits (461), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/128 (71%), Positives = 105/128 (82%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
KKRKFV DGVF AELNE L+ L+EDGYSGVEVRVTP+RTEIIIRATRT+ VLG+KGRRI
Sbjct: 9 KKRKFVKDGVFQAELNEFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKGRRI 68
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQIL 126
RELTSVVQKRF F +SVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRR + + +
Sbjct: 69 RELTSVVQKRFGFAPDSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHI 128
Query: 127 SNKALRSC 134
+ C
Sbjct: 129 MESGAKGC 136
>gi|393905484|gb|EFO25530.2| 40S ribosomal protein S3 [Loa loa]
Length = 250
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/114 (78%), Positives = 99/114 (86%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 7 QMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRR
Sbjct: 67 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRR 120
>gi|393905485|gb|EJD73988.1| 40S ribosomal protein S3, variant [Loa loa]
Length = 183
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/114 (78%), Positives = 99/114 (86%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 7 QMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRR
Sbjct: 67 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRR 120
>gi|312071288|ref|XP_003138539.1| 40S ribosomal protein S3 [Loa loa]
Length = 249
Score = 181 bits (460), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/114 (78%), Positives = 99/114 (86%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 6 QMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRR
Sbjct: 66 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRR 119
>gi|71028826|ref|XP_764056.1| 40S ribosomal protein S3 [Theileria parva strain Muguga]
gi|68351010|gb|EAN31773.1| 40S ribosomal protein S3, putative [Theileria parva]
Length = 216
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 110/130 (84%), Gaps = 2/130 (1%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SK+++F+ DGVF AELNE L+R LAEDGYSGVE+R+TPVRTEIIIRATRT+ VLGEK RR
Sbjct: 8 SKQKRFINDGVFNAELNEFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 67
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL-IISQ 124
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLA+RR ++ Q
Sbjct: 68 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAIRRAAYGVLRQ 127
Query: 125 ILSNKALRSC 134
I+ + A + C
Sbjct: 128 IMESGA-KGC 136
>gi|84996723|ref|XP_953083.1| 40S ribosomal protein S3 [Theileria annulata strain Ankara]
gi|65304079|emb|CAI76458.1| 40S ribosomal protein S3, putative [Theileria annulata]
Length = 216
Score = 181 bits (459), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 110/130 (84%), Gaps = 2/130 (1%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SK+++F+ DGVF AELNE L+R LAEDGYSGVE+R+TPVRTEIIIRATRT+ VLGEK RR
Sbjct: 7 SKQKRFINDGVFNAELNEFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 66
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL-IISQ 124
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLA+RR ++ Q
Sbjct: 67 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAIRRAAYGVLRQ 126
Query: 125 ILSNKALRSC 134
I+ + A + C
Sbjct: 127 IMESGA-KGC 135
>gi|403223989|dbj|BAM42119.1| 40S ribosomal protein S3 [Theileria orientalis strain Shintoku]
Length = 216
Score = 181 bits (459), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 106/129 (82%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SK+++F+ DGVF AELNE L+R LAEDGYSGVE+R+TPVRTEIIIRATRT+ VLGEK RR
Sbjct: 8 SKQKRFINDGVFNAELNEFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARR 67
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQI 125
IRELTS+VQKRF F +SVELYAE+V NRGLCA+AQAESLRYKLL GLAVRR + +
Sbjct: 68 IRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAVRRAAYGVLRH 127
Query: 126 LSNKALRSC 134
+ + C
Sbjct: 128 IMESGAKGC 136
>gi|70947163|ref|XP_743223.1| ribosomal protein S3 [Plasmodium chabaudi chabaudi]
gi|56522619|emb|CAH84779.1| ribosomal protein S3, putative [Plasmodium chabaudi chabaudi]
Length = 220
Score = 181 bits (458), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/115 (80%), Positives = 102/115 (88%), Gaps = 1/115 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG+KG
Sbjct: 2 QISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKG 61
Query: 64 RRIRELTSVVQKR-FKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTS+VQKR F NSVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRR
Sbjct: 62 RRIRELTSLVQKRFFNKSTNSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRR 116
>gi|58258267|ref|XP_566546.1| ribosomal protein S3 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134106179|ref|XP_778100.1| 40S ribosomal protein S3 [Cryptococcus neoformans var. neoformans
B-3501A]
gi|321251025|ref|XP_003191933.1| ribosomal protein S3 [Cryptococcus gattii WM276]
gi|50260803|gb|EAL23453.1| hypothetical protein CNBA1030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222683|gb|AAW40727.1| ribosomal protein S3, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317458401|gb|ADV20146.1| Ribosomal protein S3, putative [Cryptococcus gattii WM276]
gi|405117477|gb|AFR92252.1| ribosomal protein S3 [Cryptococcus neoformans var. grubii H99]
Length = 252
Score = 180 bits (457), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/130 (68%), Positives = 105/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF AELN+ TRELAE+GY+G EVRVT RTEIIIRAT TQ VLG+KGR
Sbjct: 7 ISKRRKFVADGVFQAELNDFFTRELAEEGYAGCEVRVTHARTEIIIRATHTQEVLGDKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIREL ++++KRFKFPEN++ELYAEKV RGL A AQAESLRYKLLGGLA+RR + +
Sbjct: 67 RIRELKALIEKRFKFPENALELYAEKVQYRGLSATAQAESLRYKLLGGLAMRRACYGVLR 126
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 127 FVMESGAKGC 136
>gi|428179210|gb|EKX48082.1| small subunit ribosomal protein S3e, cytoplasmic [Guillardia theta
CCMP2712]
Length = 249
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/113 (76%), Positives = 101/113 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV DGV +AELNE+L ELAEDGYSGVE+R TP+RTEIIIRATRT+ VLGEKG+
Sbjct: 6 ISKKRKFVQDGVLYAELNEMLMHELAEDGYSGVEIRRTPMRTEIIIRATRTREVLGEKGQ 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RIRELTS VQKRF F E +VE++AE+V+NRGL A+AQAESL++KLLGGL VRR
Sbjct: 66 RIRELTSAVQKRFGFAEGTVEMFAERVHNRGLSAMAQAESLKFKLLGGLQVRR 118
>gi|452988654|gb|EME88409.1| hypothetical protein MYCFIDRAFT_70441 [Pseudocercospora fijiensis
CIRAD86]
Length = 273
Score = 180 bits (456), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/130 (67%), Positives = 102/130 (78%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 15 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 74
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++ RFKFP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 75 RIRELTSLITHRFKFPPDSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 134
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 135 FIMESGAKGC 144
>gi|392572589|gb|EIW65734.1| hypothetical protein TREMEDRAFT_41205 [Tremella mesenterica DSM
1558]
Length = 249
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/133 (67%), Positives = 103/133 (77%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ QISKKRKF+ADGVF AEL E T ELA++GYSG EVRVT RTEIIIRAT TQ VLG
Sbjct: 4 SAQISKKRKFIADGVFQAELGEFFTHELADEGYSGCEVRVTHARTEIIIRATHTQEVLGA 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
GRRIREL S+V KRFKFPENS+ELYAE+V RGL A+AQAESLRYKLLGGLA+RR
Sbjct: 64 NGRRIRELRSLVMKRFKFPENSLELYAERVQYRGLSAVAQAESLRYKLLGGLAMRRACYG 123
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 124 VLRFVMESGAKGC 136
>gi|170577011|ref|XP_001893846.1| 40S ribosomal protein S3 [Brugia malayi]
gi|158599891|gb|EDP37316.1| 40S ribosomal protein S3, putative [Brugia malayi]
Length = 250
Score = 179 bits (455), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/114 (78%), Positives = 99/114 (86%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
++SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+G
Sbjct: 7 EMSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLRYKL+GGLAVRR
Sbjct: 67 RRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRR 120
>gi|167519583|ref|XP_001744131.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777217|gb|EDQ90834.1| predicted protein [Monosiga brevicollis MX1]
Length = 252
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/131 (66%), Positives = 105/131 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF AELNE+ RELAEDGY+GVE++ TP TEI+I ATRTQ+VLGEKG
Sbjct: 5 QMSKKRKFVADGVFKAELNELFMRELAEDGYAGVEIKKTPKSTEIVILATRTQHVLGEKG 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIIS 123
RRIRELT+ +QKRF F ++ VEL+AEKV NRGLCA+AQ E+LRYKL GGLAVRR +
Sbjct: 65 RRIRELTAFIQKRFGFQKDEVELFAEKVANRGLCAVAQCENLRYKLTGGLAVRRACYGVV 124
Query: 124 QILSNKALRSC 134
+ + + C
Sbjct: 125 RFVMESGAKGC 135
>gi|124810210|ref|XP_001348801.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7]
gi|23497701|gb|AAN37240.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7]
Length = 221
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/118 (77%), Positives = 103/118 (87%), Gaps = 1/118 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG
Sbjct: 1 MSAPISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLG 60
Query: 61 EKGRRIRELTSVVQKR-FKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+KGRRIRELTS+VQKR F NSVEL+AE+V +RGLCA+AQAESLRYKLL GLAVRR
Sbjct: 61 DKGRRIRELTSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRR 118
>gi|398398591|ref|XP_003852753.1| hypothetical protein MYCGRDRAFT_42422 [Zymoseptoria tritici IPO323]
gi|339472634|gb|EGP87729.1| hypothetical protein MYCGRDRAFT_42422 [Zymoseptoria tritici IPO323]
Length = 265
Score = 179 bits (455), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/130 (67%), Positives = 102/130 (78%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 6 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++ RFKFP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 66 RIRELTSLITHRFKFPADSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 125
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 126 FIMESGAKGC 135
>gi|209693449|ref|NP_001129413.1| ribosomal protein S3 [Acyrthosiphon pisum]
gi|239790667|dbj|BAH71881.1| ACYPI005949 [Acyrthosiphon pisum]
Length = 245
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/133 (65%), Positives = 105/133 (78%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A S K++FV+DG+ AELNE LTRELAEDGYSGV+VR P RTEI+I ATRTQNVLG+
Sbjct: 3 AKTTSVKKRFVSDGMLRAELNEFLTRELAEDGYSGVDVRAAPSRTEIVISATRTQNVLGD 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
KGRRIRELTS++QKRF F + +VEL+AEKV RGLCA+AQAESLRYKL+GGLAVRR
Sbjct: 63 KGRRIRELTSLIQKRFDFKDKAVELFAEKVAQRGLCAVAQAESLRYKLIGGLAVRRACYG 122
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 123 VLRFIMESGAKGC 135
>gi|156100003|ref|XP_001615729.1| 40S ribosomal protein S3 [Plasmodium vivax Sal-1]
gi|221059123|ref|XP_002260207.1| ribosomal protein S3 [Plasmodium knowlesi strain H]
gi|148804603|gb|EDL46002.1| 40S ribosomal protein S3, putative [Plasmodium vivax]
gi|193810280|emb|CAQ41474.1| ribosomal protein S3, putative [Plasmodium knowlesi strain H]
gi|389585194|dbj|GAB67925.1| 40S ribosomal protein S3 [Plasmodium cynomolgi strain B]
Length = 222
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/118 (77%), Positives = 103/118 (87%), Gaps = 1/118 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M+ ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG
Sbjct: 1 MSAPISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLG 60
Query: 61 EKGRRIRELTSVVQKR-FKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+KGRRIRELTS+VQKR F NSVEL+AE+V +RGLCA+AQAESLRYKLL GLAVRR
Sbjct: 61 DKGRRIRELTSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRR 118
>gi|108709466|gb|ABF97261.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
Length = 205
Score = 179 bits (454), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/111 (81%), Positives = 96/111 (86%)
Query: 24 VLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENS 83
+LTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRF FPEN
Sbjct: 1 MLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENG 60
Query: 84 VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
VELYAEKV NRGLCAIAQAESLRYKLLGGLAVRR + + + + C
Sbjct: 61 VELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGC 111
>gi|296094|emb|CAA51425.1| ribosomal protein S3 [Drosophila melanogaster]
Length = 246
Score = 178 bits (452), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 92/130 (70%), Positives = 102/130 (78%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFV+DG+F AELNE LTRELAEDGYSGVEVRVTP TEIII AT+TQ VL EKGR
Sbjct: 7 ISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPFGTEIIIMATKTQQVLAEKGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL G LAVRR + +
Sbjct: 67 RIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLR 126
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 127 YIMESGAKGC 136
>gi|453089728|gb|EMF17768.1| ribosomal protein S3 [Mycosphaerella populorum SO2202]
Length = 276
Score = 178 bits (451), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 102/130 (78%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 15 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 74
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++ RF+FP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 75 RIRELTSLITHRFRFPPDSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 134
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 135 FIMESGAKGC 144
>gi|452848046|gb|EME49978.1| hypothetical protein DOTSEDRAFT_122074 [Dothistroma septosporum
NZE10]
Length = 266
Score = 178 bits (451), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 102/130 (78%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 6 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++ RF+FP +SV LYA KV +RGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 66 RIRELTSLITHRFRFPPDSVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 125
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 126 FIMESGAKGC 135
>gi|268569106|ref|XP_002648176.1| C. briggsae CBR-RPS-3 protein [Caenorhabditis briggsae]
Length = 247
Score = 177 bits (450), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 87/113 (76%), Positives = 98/113 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRR 119
>gi|449304480|gb|EMD00487.1| hypothetical protein BAUCODRAFT_99745 [Baudoinia compniacensis UAMH
10762]
Length = 282
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/130 (66%), Positives = 101/130 (77%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT TQ VLGE+GR
Sbjct: 16 VSKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGR 75
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++ RF+FP SV LYA KV +RGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 76 RIRELTSLITHRFRFPPESVSLYAAKVQSRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 135
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 136 FIMESGAKGC 145
>gi|341895059|gb|EGT50994.1| CBN-RPS-3 protein [Caenorhabditis brenneri]
Length = 246
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/113 (76%), Positives = 98/113 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRR 119
>gi|17554770|ref|NP_498349.1| Protein RPS-3 [Caenorhabditis elegans]
gi|1350989|sp|P48152.1|RS3_CAEEL RecName: Full=40S ribosomal protein S3
gi|351050702|emb|CCD65297.1| Protein RPS-3 [Caenorhabditis elegans]
Length = 247
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/113 (76%), Positives = 98/113 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRR 119
>gi|68070737|ref|XP_677280.1| ribosomal protein S3 [Plasmodium berghei strain ANKA]
gi|56497334|emb|CAH98166.1| ribosomal protein S3, putative [Plasmodium berghei]
Length = 218
Score = 177 bits (450), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/115 (80%), Positives = 103/115 (89%), Gaps = 3/115 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKF+ DGVF AELNE L R LAEDGYSGVEVRVTP+RTE+IIRATRT+ VLG+KGR
Sbjct: 1 ISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKGR 60
Query: 65 RIRELTSVVQKRFKFPE--NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RIRELTS+VQKRF F + NSVEL+AE+V NRGLCA+AQAESLRYKLL GLAVRR
Sbjct: 61 RIRELTSLVQKRF-FNKLTNSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRR 114
>gi|67527620|ref|XP_661691.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4]
gi|40739785|gb|EAA58975.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4]
gi|259481325|tpe|CBF74736.1| TPA: hypothetical protein similar to 40s ribosomal protein s3
(Eurofung) [Aspergillus nidulans FGSC A4]
Length = 264
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/130 (68%), Positives = 101/130 (77%), Gaps = 2/130 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+I T TQ VLGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDI--STTHTQEVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 66 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 125
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 126 FIMESGAKGC 135
>gi|189308068|gb|ACD86918.1| ribosomal protein S3 [Caenorhabditis brenneri]
Length = 205
Score = 177 bits (448), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/113 (76%), Positives = 98/113 (86%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRR 119
>gi|322693782|gb|EFY85631.1| 40S ribosomal protein S3, putative [Metarhizium acridum CQMa 102]
Length = 255
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/123 (70%), Positives = 99/123 (80%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
VADGVF+AELNE RELAE+GYSGVEVRVTP T+IIIRAT+TQ VLGE+GRRIRELTS
Sbjct: 13 VADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGEQGRRIRELTS 72
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKAL 131
++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + + +
Sbjct: 73 LIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIMESGA 132
Query: 132 RSC 134
+ C
Sbjct: 133 KGC 135
>gi|209489412|gb|ACI49174.1| hypothetical protein Csp3_JD02.002 [Caenorhabditis angaria]
Length = 247
Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/113 (76%), Positives = 99/113 (87%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V +G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 LTKKKKAVQNGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RI+ELTSVVQKRF F E SVEL+AEKV+NRGLCA+AQ ESLRYKL+GGLAVRR
Sbjct: 67 RIKELTSVVQKRFGFEEGSVELFAEKVSNRGLCAVAQCESLRYKLVGGLAVRR 119
>gi|391337612|ref|XP_003743161.1| PREDICTED: 40S ribosomal protein S3-like [Metaseiulus occidentalis]
Length = 239
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/117 (76%), Positives = 100/117 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M QISKKR+FVADGVF AELNE L RELAE+GYSGVEVR +T+III ATRTQ+VLG
Sbjct: 1 MPGQISKKRRFVADGVFNAELNEFLRRELAENGYSGVEVRNGATKTDIIIMATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGR+IRELT+VVQKRF F E +V L+AEKV+ RGLCAI Q ESLRYKL+GGLAVRR
Sbjct: 61 EKGRKIRELTAVVQKRFGFKEGTVNLFAEKVSARGLCAITQCESLRYKLIGGLAVRR 117
>gi|156840842|ref|XP_001643799.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156114424|gb|EDO15941.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 234
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/134 (64%), Positives = 105/134 (78%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ+VLG
Sbjct: 1 MVAFISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFKF ++ LYAE+V +RGL A+AQAES+++KLL GLA+RR
Sbjct: 61 ENGRRINELTLLVQKRFKFKPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRYVMESGAKGC 134
>gi|367007661|ref|XP_003688560.1| 40S ribosomal protein S3 [Tetrapisispora phaffii CBS 4417]
gi|357526869|emb|CCE66126.1| hypothetical protein TPHA_0O01590 [Tetrapisispora phaffii CBS 4417]
Length = 238
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/134 (65%), Positives = 104/134 (77%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ VLG
Sbjct: 1 MVAYISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFKF +V LYAE+V +RGL A+AQAES+++KLL GLA+RR
Sbjct: 61 ENGRRINELTLLVQKRFKFKAGTVVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVIRYVMESGAKGC 134
>gi|410075477|ref|XP_003955321.1| hypothetical protein KAFR_0A07520 [Kazachstania africana CBS 2517]
gi|372461903|emb|CCF56186.1| hypothetical protein KAFR_0A07520 [Kazachstania africana CBS 2517]
Length = 241
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 105/134 (78%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL AIAQAES+++KLL GLA+RR
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAIAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRFVMESGAKGC 134
>gi|366995337|ref|XP_003677432.1| hypothetical protein NCAS_0G01920 [Naumovozyma castellii CBS 4309]
gi|342303301|emb|CCC71079.1| hypothetical protein NCAS_0G01920 [Naumovozyma castellii CBS 4309]
Length = 244
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 105/134 (78%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL AIAQAES+++KLL GLA+RR
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAIAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRYVMESGAKGC 134
>gi|365988130|ref|XP_003670896.1| hypothetical protein NDAI_0F03350 [Naumovozyma dairenensis CBS 421]
gi|343769667|emb|CCD25653.1| hypothetical protein NDAI_0F03350 [Naumovozyma dairenensis CBS 421]
Length = 243
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 105/134 (78%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL AIAQAES+++KLL GLA+RR
Sbjct: 61 ENGRRINELTLLVQKRFKYTPGTIVLYAERVQDRGLSAIAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRYVMESGAKGC 134
>gi|255711614|ref|XP_002552090.1| 40S ribosomal protein S3 [Lachancea thermotolerans]
gi|238933468|emb|CAR21652.1| KLTH0B06974p [Lachancea thermotolerans CBS 6340]
Length = 248
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 105/134 (78%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVAVISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFK+ S+ LYAE+V +RGL A+AQAES+++KLL GLA+RR
Sbjct: 61 ENGRRINELTLLVQKRFKYQAGSIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRYVMESGAKGC 134
>gi|50291535|ref|XP_448200.1| 40S ribosomal protein S3 [Candida glabrata CBS 138]
gi|49527511|emb|CAG61151.1| unnamed protein product [Candida glabrata]
Length = 247
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/134 (63%), Positives = 106/134 (79%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M + ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVSLISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RR
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRYVMESGAKGC 134
>gi|367008326|ref|XP_003678663.1| 40S ribosomal protein S3 [Torulaspora delbrueckii]
gi|359746320|emb|CCE89452.1| hypothetical protein TDEL_0A01200 [Torulaspora delbrueckii]
Length = 245
Score = 176 bits (446), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 105/134 (78%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RR
Sbjct: 61 ENGRRINELTLLVQKRFKYKPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRYVMESGAKGC 134
>gi|398364505|ref|NP_014221.3| ribosomal 40S subunit protein S3 [Saccharomyces cerevisiae S288c]
gi|1173255|sp|P05750.5|RS3_YEAST RecName: Full=40S ribosomal protein S3; AltName: Full=RP13;
AltName: Full=YS3
gi|313103665|pdb|3IZB|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|315113450|pdb|3O2Z|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The First 80s In The Asymmetric Unit.
gi|315113478|pdb|3O30|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|364506099|pdb|3U5C|D Chain D, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome A
gi|364506137|pdb|3U5G|D Chain D, The Structure Of The Eukaryotic Ribosome At 3.0 A
Resolution. This Entry Contains Proteins Of The 40s
Subunit, Ribosome B
gi|457164|dbj|BAA04973.1| ribosomal protein YS3 [Saccharomyces cerevisiae]
gi|1302158|emb|CAA96070.1| RPS3 [Saccharomyces cerevisiae]
gi|1463121|gb|AAC49380.1| ribosomal protein S3 [Saccharomyces cerevisiae]
gi|151944361|gb|EDN62639.1| ribosomal protein S3 [Saccharomyces cerevisiae YJM789]
gi|190409159|gb|EDV12424.1| ribosomal protein S3 [Saccharomyces cerevisiae RM11-1a]
gi|207341817|gb|EDZ69765.1| YNL178Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270755|gb|EEU05916.1| Rps3p [Saccharomyces cerevisiae JAY291]
gi|259149181|emb|CAY82423.1| Rps3p [Saccharomyces cerevisiae EC1118]
gi|285814479|tpg|DAA10373.1| TPA: ribosomal 40S subunit protein S3 [Saccharomyces cerevisiae
S288c]
gi|323331906|gb|EGA73318.1| Rps3p [Saccharomyces cerevisiae AWRI796]
gi|323335912|gb|EGA77190.1| Rps3p [Saccharomyces cerevisiae Vin13]
gi|323346843|gb|EGA81122.1| Rps3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352903|gb|EGA85205.1| Rps3p [Saccharomyces cerevisiae VL3]
gi|349580763|dbj|GAA25922.1| K7_Rps3p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763526|gb|EHN05054.1| Rps3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392296815|gb|EIW07916.1| Rps3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 240
Score = 176 bits (445), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/134 (63%), Positives = 105/134 (78%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RR
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRYVMESGAKGC 134
>gi|401623905|gb|EJS41984.1| rps3p [Saccharomyces arboricola H-6]
Length = 240
Score = 176 bits (445), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/134 (63%), Positives = 105/134 (78%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RR
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRYVMESGAKGC 134
>gi|401839576|gb|EJT42741.1| RPS3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 240
Score = 175 bits (444), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 85/134 (63%), Positives = 105/134 (78%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RR
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRYVMESGAKGC 134
>gi|365758790|gb|EHN00617.1| Rps3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 240
Score = 175 bits (444), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/134 (63%), Positives = 105/134 (78%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RR
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRYVMESGAKGC 134
>gi|254564691|ref|XP_002489456.1| 40S ribosomal protein S3 [Komagataella pastoris GS115]
gi|238029252|emb|CAY67175.1| Protein component of the small (40S) ribosomal subunit
[Komagataella pastoris GS115]
gi|328349885|emb|CCA36285.1| 40S ribosomal protein S3 [Komagataella pastoris CBS 7435]
Length = 243
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 87/113 (76%), Positives = 96/113 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAEDGYSGVEVRVTP TEIIIRAT+T +VLGE GR
Sbjct: 6 ISKKRKLVADGVFYAELNEYFTRELAEDGYSGVEVRVTPTTTEIIIRATQTNSVLGENGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RIRELT++VQKRFK E V LYAE+V +RGL A+ Q ESLRYKLL GLA+RR
Sbjct: 66 RIRELTALVQKRFKIDEGKVILYAERVQDRGLSAVTQCESLRYKLLNGLAIRR 118
>gi|444317298|ref|XP_004179306.1| hypothetical protein TBLA_0B09710 [Tetrapisispora blattae CBS 6284]
gi|387512346|emb|CCH59787.1| hypothetical protein TBLA_0B09710 [Tetrapisispora blattae CBS 6284]
Length = 248
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 86/130 (66%), Positives = 103/130 (79%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRATRTQ VLGE GR
Sbjct: 13 ISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQEVLGENGR 72
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RI ELT +VQKRFK+ SV LYAE++ +RGL A+AQAES+++KLL GLA+RR + +
Sbjct: 73 RINELTLLVQKRFKYKAGSVVLYAERIQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVR 132
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 133 YVMESGAKGC 142
>gi|33772509|gb|AAQ54656.1| 40S ribosomal protein S3 [Oikopleura dioica]
gi|313212505|emb|CBY36474.1| unnamed protein product [Oikopleura dioica]
gi|313217134|emb|CBY38302.1| unnamed protein product [Oikopleura dioica]
gi|313233568|emb|CBY09740.1| unnamed protein product [Oikopleura dioica]
Length = 239
Score = 174 bits (442), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 88/133 (66%), Positives = 105/133 (78%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
+ ISKKRK VA+GVF AEL+ L +ELAEDGYSGVEVR+TP RTEIII ATRTQNVLG+
Sbjct: 5 SANISKKRKHVAEGVFRAELDGYLRKELAEDGYSGVEVRITPKRTEIIILATRTQNVLGD 64
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
K +RIRELT++VQKRF+ + +VEL+AEKV NRGLCAIAQ ESLRYKL GGLAVRR
Sbjct: 65 KAKRIRELTALVQKRFQIKDGAVELFAEKVANRGLCAIAQCESLRYKLEGGLAVRRAAYG 124
Query: 122 ISQILSNKALRSC 134
+ + + + C
Sbjct: 125 VLRFIMESGAKGC 137
>gi|49258823|pdb|1S1H|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is
In File 1s1i
Length = 192
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/130 (64%), Positives = 104/130 (80%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLGE GR
Sbjct: 4 ISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RR + +
Sbjct: 64 RINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVR 123
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 124 YVMESGAKGC 133
>gi|363754787|ref|XP_003647609.1| hypothetical protein Ecym_6420 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891246|gb|AET40792.1| hypothetical protein Ecym_6420 [Eremothecium cymbalariae
DBVPG#7215]
Length = 328
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 104/134 (77%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP TE+IIRATRTQ+VLG
Sbjct: 85 MVTVISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTTTEVIIRATRTQDVLG 144
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFK+ ++ L+AE+V RGL A+AQAESL++KLL GLA+RR
Sbjct: 145 ENGRRINELTLLVQKRFKYQPGTIVLFAERVQERGLSAVAQAESLKFKLLNGLAIRRAAY 204
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 205 GVVRYVMESGAKGC 218
>gi|326436207|gb|EGD81777.1| 40S ribosomal protein S3 [Salpingoeca sp. ATCC 50818]
Length = 234
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/131 (68%), Positives = 104/131 (79%), Gaps = 1/131 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKR+FVADGVF +ELNE L R L E GY+GVEVR TP RTEIII ATRTQ VLGEKG
Sbjct: 5 QMSKKRQFVADGVFKSELNEFLQRSLGEQGYAGVEVRKTPNRTEIIILATRTQEVLGEKG 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIIS 123
RRIRELT +V+KRF F +N VEL+AEKV NRGLCA+AQ ESLRYKLLGGLAVRR +
Sbjct: 65 RRIRELTGLVKKRFGFKDN-VELFAEKVANRGLCAMAQCESLRYKLLGGLAVRRACYGVL 123
Query: 124 QILSNKALRSC 134
+++ + C
Sbjct: 124 RLVMESGAKGC 134
>gi|164658119|ref|XP_001730185.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966]
gi|159104080|gb|EDP42971.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966]
Length = 264
Score = 174 bits (440), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/130 (67%), Positives = 102/130 (78%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRKFVADGVF AELNE TRELA +GYSG VRV VRTEIIIRAT TQ VLG+KGR
Sbjct: 6 ISKKRKFVADGVFTAELNEFFTRELAAEGYSGCLVRVNHVRTEIIIRATHTQEVLGDKGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
R+RELT++V++RF+FPE S+ELYAEKV NRGL A+AQ ESLR KLLGGL VRR + +
Sbjct: 66 RLRELTTLVRQRFRFPEGSLELYAEKVANRGLHAVAQCESLRNKLLGGLPVRRAAYGVLR 125
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 126 YVMESGAKGC 135
>gi|405973234|gb|EKC37958.1| 40S ribosomal protein S3 [Crassostrea gigas]
Length = 237
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/124 (72%), Positives = 96/124 (77%), Gaps = 8/124 (6%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FVADGVF AELN LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT
Sbjct: 17 FVADGVFKAELNNFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELT 76
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKA 130
SVVQKRF FPE +VE RGLCAIAQ ESLRYKL+GGLAVRR + + +
Sbjct: 77 SVVQKRFNFPEGTVE--------RGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESG 128
Query: 131 LRSC 134
+ C
Sbjct: 129 AKGC 132
>gi|254580157|ref|XP_002496064.1| 40S ribosomal protein S3 [Zygosaccharomyces rouxii]
gi|238938955|emb|CAR27131.1| ZYRO0C09636p [Zygosaccharomyces rouxii]
Length = 246
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/134 (63%), Positives = 103/134 (76%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSG EVRVTP +TEIIIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGTEVRVTPTKTEIIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFK+ ++ LYAE+V RGL A+AQAES+++KLL GLA+RR
Sbjct: 61 EGGRRINELTLLVQKRFKYKPGTIVLYAERVQERGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRYVMESGAKGC 134
>gi|156084414|ref|XP_001609690.1| 40S ribosomal protein S3 protein [Babesia bovis T2Bo]
gi|154796942|gb|EDO06122.1| 40S ribosomal protein S3 protein, putative [Babesia bovis]
Length = 223
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/132 (65%), Positives = 105/132 (79%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T+ S RKF+ DGVF AELNE L+R LAEDGYSGVE+R+TPVRTEIIIRATR + V+GEK
Sbjct: 5 TRKSMCRKFIGDGVFNAELNEFLSRVLAEDGYSGVELRITPVRTEIIIRATRAREVVGEK 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
RRIRELTS++QKRF F ++VELYAE+V ++GLCA+AQAESLRYKLL GLAVRR +
Sbjct: 65 ARRIRELTSLIQKRFGFSPDTVELYAERVEHKGLCAMAQAESLRYKLLKGLAVRRAAYGV 124
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 125 LRHIMESGAKGC 136
>gi|406603719|emb|CCH44744.1| 40S ribosomal protein [Wickerhamomyces ciferrii]
Length = 246
Score = 173 bits (439), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/117 (72%), Positives = 98/117 (83%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE GY+GVEVRVTP RTE+IIRAT+T VLG
Sbjct: 1 MVNIISKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRVTPTRTEVIIRATQTNAVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
E GRRI ELTS+VQKRFKF ++ LYAE+V +RGL A+AQAESL++KLL GLA+RR
Sbjct: 61 ENGRRIYELTSLVQKRFKFAPGTIVLYAERVQDRGLSAVAQAESLKFKLLNGLAIRR 117
>gi|50553820|ref|XP_504321.1| 40S ribosomal protein S3 [Yarrowia lipolytica]
gi|49650190|emb|CAG79920.1| YALI0E23694p [Yarrowia lipolytica CLIB122]
Length = 246
Score = 173 bits (438), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/113 (72%), Positives = 96/113 (84%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKRK VADGVF+AELNE TRELAE+GYSGVEVR+TP +TEI++RAT T VLGE GR
Sbjct: 7 ISKKRKIVADGVFYAELNEFFTRELAEEGYSGVEVRLTPTKTEIVVRATHTNKVLGENGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RIREL S+VQKRF+ PE SV +YAE+V RGL A+AQ ES++YKLL GLA+RR
Sbjct: 67 RIRELMSLVQKRFRLPEGSVTIYAERVQERGLSAVAQCESVKYKLLNGLAIRR 119
>gi|302306412|ref|NP_982809.2| 40S ribosomal protein S3 [Ashbya gossypii ATCC 10895]
gi|299788504|gb|AAS50633.2| ABL138Wp [Ashbya gossypii ATCC 10895]
gi|374106011|gb|AEY94921.1| FABL138Wp [Ashbya gossypii FDAG1]
Length = 244
Score = 173 bits (438), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/134 (64%), Positives = 103/134 (76%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP TE+IIRATRTQ+VLG
Sbjct: 1 MVAVISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTTTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFK+ ++ L+AE+V RGL A+AQAESLR+KLL GLA+RR
Sbjct: 61 ENGRRINELTLLVQKRFKYQPGTIVLFAERVQERGLSAVAQAESLRFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRYVMESGAKGC 134
>gi|281500809|pdb|3JYV|C Chain C, Structure Of The 40s Rrna And Proteins And PE TRNA FOR
EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces
Lanuginosus Ribosome At 8.9a Resolution
Length = 188
Score = 172 bits (437), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/129 (64%), Positives = 103/129 (79%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
SKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLGE GRR
Sbjct: 1 SKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 60
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQI 125
I ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RR + +
Sbjct: 61 INELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 120
Query: 126 LSNKALRSC 134
+ + C
Sbjct: 121 VMESGAKGC 129
>gi|339240791|ref|XP_003376321.1| 40S ribosomal protein S3-A [Trichinella spiralis]
gi|316974969|gb|EFV58434.1| 40S ribosomal protein S3-A [Trichinella spiralis]
Length = 330
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/129 (69%), Positives = 99/129 (76%), Gaps = 2/129 (1%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
S K+KF+ADGVF AELN RELAEDGYSGVEVR TP +TEIII ATRTQNVLGEKGRR
Sbjct: 100 SIKKKFIADGVFKAELNNFFMRELAEDGYSGVEVRKTPRKTEIIIMATRTQNVLGEKGRR 159
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQI 125
IRELTS+VQKRF PE S LYAEKV RGLCAIAQ ESLR+KL+GGL VRR I +
Sbjct: 160 IRELTSLVQKRFNLPEES--LYAEKVAQRGLCAIAQCESLRFKLIGGLPVRRACYGILRY 217
Query: 126 LSNKALRSC 134
+ + C
Sbjct: 218 IMESQAKGC 226
>gi|403216300|emb|CCK70797.1| hypothetical protein KNAG_0F01290 [Kazachstania naganishii CBS
8797]
Length = 249
Score = 172 bits (436), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 103/134 (76%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ VLG
Sbjct: 1 MVALISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQEVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFK+ ++ L+AE+V RGL A+AQAES+++KLL GLA+RR
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLFAERVQERGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRYVMESGAKGC 134
>gi|468426|gb|AAA35010.1| ribosomal protein S3 [Saccharomyces cerevisiae]
Length = 240
Score = 172 bits (435), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/134 (62%), Positives = 104/134 (77%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGV +AELNE TRELAE+GYSGVEVRVTP +TE+IIRATRTQ+VLG
Sbjct: 1 MVALISKKRKLVADGVNYAELNEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RR
Sbjct: 61 ENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRYVMESGAKGC 134
>gi|268619106|gb|ACZ13329.1| 40S ribosomal protein S3 [Bursaphelenchus xylophilus]
Length = 272
Score = 171 bits (433), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 87/130 (66%), Positives = 100/130 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
I+KK+K V DGVF AELN L +ELAEDGY+GVEVR P RTE+II ATRTQNVLGE+GR
Sbjct: 27 ITKKKKAVQDGVFKAELNNFLMKELAEDGYAGVEVRRAPTRTEVIITATRTQNVLGERGR 86
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+VVQKRF F VELYAEKV NRGLCA+AQ ESLR+KL GGLAVRR + +
Sbjct: 87 RIRELTAVVQKRFGFNVGQVELYAEKVANRGLCAVAQCESLRFKLCGGLAVRRACYGVLR 146
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 147 FIMESQAKGC 156
>gi|346466617|gb|AEO33153.1| hypothetical protein [Amblyomma maculatum]
Length = 254
Score = 171 bits (432), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/116 (75%), Positives = 95/116 (81%)
Query: 19 AELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFK 78
AELNE L RELAEDGYSGVEVRVTP TEIII ATRTQ+VLGEKGRRIRELTSVVQKRF
Sbjct: 31 AELNEFLRRELAEDGYSGVEVRVTPQNTEIIILATRTQSVLGEKGRRIRELTSVVQKRFN 90
Query: 79 FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
FPE +VELYAEKV +RGLCAIAQ ESLRYKL+GGLAVRR + + + + C
Sbjct: 91 FPEGTVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGC 146
>gi|50306913|ref|XP_453432.1| 40S ribosomal protein S3 [Kluyveromyces lactis NRRL Y-1140]
gi|49642566|emb|CAH00528.1| KLLA0D08305p [Kluyveromyces lactis]
Length = 237
Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/134 (60%), Positives = 105/134 (78%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ISKKRK VADGVF+AELNE TRELAE+GYSGVEVRVTP +TEIIIRAT+ Q+V+G
Sbjct: 1 MVAIISKKRKLVADGVFYAELNEFFTRELAEEGYSGVEVRVTPTKTEIIIRATKVQDVVG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
E GRRI ELT +++KRFK+ ++ LYAE+V++RGL A+AQAES+++KLL GLA+RR
Sbjct: 61 ENGRRINELTLLIEKRFKYKRGTIALYAERVHDRGLSAVAQAESMKFKLLNGLAIRRAAY 120
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 121 GVVRYVMESGAKGC 134
>gi|308498826|ref|XP_003111599.1| CRE-RPS-3 protein [Caenorhabditis remanei]
gi|308239508|gb|EFO83460.1| CRE-RPS-3 protein [Caenorhabditis remanei]
Length = 255
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/121 (71%), Positives = 98/121 (80%), Gaps = 8/121 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++KK+K V G+F AELN L +ELAEDGYSGVEVR TP R E+II ATRTQNVLGE+GR
Sbjct: 7 VTKKKKAVIGGIFKAELNNFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGR 66
Query: 65 RIRELTSVVQKRFKFPENSVE--------LYAEKVNNRGLCAIAQAESLRYKLLGGLAVR 116
RI+ELTSVVQKRF F E SVE LYAEKV+NRGLCA+AQ ESLRYKL+GGLAVR
Sbjct: 67 RIKELTSVVQKRFAFEEGSVEVKFSFRNLLYAEKVSNRGLCAVAQCESLRYKLVGGLAVR 126
Query: 117 R 117
R
Sbjct: 127 R 127
>gi|149068843|gb|EDM18395.1| rCG40478, isoform CRA_e [Rattus norvegicus]
Length = 129
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/124 (74%), Positives = 98/124 (79%), Gaps = 1/124 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGL +K +G AVR + L
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLWPAMVCFGSLWK-VGPRAVRLWSL 119
Query: 121 IISQ 124
S+
Sbjct: 120 GSSE 123
>gi|148684440|gb|EDL16387.1| ribosomal protein S3, isoform CRA_b [Mus musculus]
Length = 129
Score = 169 bits (427), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/96 (88%), Positives = 87/96 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGL 96
EKGRRIRELT+VVQKRF FPE SVELYAEKV RGL
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGL 96
>gi|225682378|gb|EEH20662.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb03]
Length = 261
Score = 168 bits (426), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/130 (66%), Positives = 98/130 (75%), Gaps = 9/130 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVF+AELNE RELAE+GYSGVEVRVTP T+II LGE+GR
Sbjct: 8 ISKRRKFVADGVFYAELNEFFQRELAEEGYSGVEVRVTPTVTDII---------LGEQGR 58
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 59 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 118
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 119 FIMESGAKGC 128
>gi|320580879|gb|EFW95101.1| 40S ribosomal protein S3 [Ogataea parapolymorpha DL-1]
Length = 235
Score = 168 bits (425), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 80/117 (68%), Positives = 95/117 (81%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M SKKRK VADGVF+AELNE TREL E+GY+GVEVR+TP +TE+II AT TQ VLG
Sbjct: 1 MVANFSKKRKLVADGVFYAELNEFFTRELPEEGYAGVEVRITPTKTEVIISATNTQRVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRI ELTS++QKRFKF ++ L+AE+V +RGL A+ Q ESL+YKLL GLAVRR
Sbjct: 61 EKGRRINELTSLIQKRFKFAPGTIVLFAERVQDRGLSAVTQCESLKYKLLNGLAVRR 117
>gi|110456370|gb|ABG74703.1| putative ribosomal protein S3 [Diaphorina citri]
Length = 220
Score = 167 bits (424), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/113 (72%), Positives = 93/113 (82%)
Query: 22 NEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPE 81
+E LTRELAEDGYSGVE+R TP RTEIII ATRTQNVLG+KGRRIRELTSVVQKRFKF +
Sbjct: 1 DEFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIRELTSVVQKRFKFAD 60
Query: 82 NSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
++ELYAEKV RGLCAIAQAESLRYKL+GGLAVRR + + + + C
Sbjct: 61 GAIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGC 113
>gi|347527|gb|AAA18095.1| ribosomal protein S3, partial [Homo sapiens]
Length = 95
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/95 (88%), Positives = 86/95 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRG 95
EKGRRIRELT+VVQKRF FPE SVELYAEKV RG
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRG 95
>gi|410040211|ref|XP_003950757.1| PREDICTED: 40S ribosomal protein S3-A-like [Pan troglodytes]
gi|410040213|ref|XP_003950758.1| PREDICTED: 40S ribosomal protein S3-A-like [Pan troglodytes]
gi|410040215|ref|XP_003950759.1| PREDICTED: 40S ribosomal protein S3-A-like [Pan troglodytes]
Length = 122
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/97 (85%), Positives = 87/97 (89%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+NE LT+ELAEDGYSGVE+RVTP RTEIII ATRTQNVLGEKG RIRELT+VVQKRF P
Sbjct: 1 MNEFLTQELAEDGYSGVEMRVTPTRTEIIILATRTQNVLGEKGWRIRELTAVVQKRFGSP 60
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
E SVELYAEKV RGLCAIAQAESL YKLLGGLAVRR
Sbjct: 61 EGSVELYAEKVATRGLCAIAQAESLPYKLLGGLAVRR 97
>gi|263173249|gb|ACY69890.1| S3e ribosomal protein [Cimex lectularius]
Length = 221
Score = 165 bits (417), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 81/120 (67%), Positives = 95/120 (79%)
Query: 15 GVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQ 74
GV AELNE LTRELAE+GYSG+E+R+TP RTEIII AT TQNVLGEKG+RIR LTSV+Q
Sbjct: 1 GVLKAELNEFLTRELAEEGYSGIEMRMTPARTEIIIMATSTQNVLGEKGKRIRALTSVIQ 60
Query: 75 KRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
KRF+F E ++LY EKV RGLCAIAQAESLRYKL+GGLAVRR + + + + C
Sbjct: 61 KRFQFAEGKLDLYTEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMENGAKGC 120
>gi|444731980|gb|ELW72307.1| Calcium-binding protein 39-like protein [Tupaia chinensis]
Length = 518
Score = 163 bits (413), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/112 (75%), Positives = 93/112 (83%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
+ K+KF ADG+F AELNE TRELAED SG+EVRVTP RTEII+ ATRTQNVLGEKG R
Sbjct: 109 TSKKKFDADGIFKAELNEFRTRELAEDRCSGLEVRVTPTRTEIIVLATRTQNVLGEKGPR 168
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
I+E T+V+ KR FPE SVELYAEKV RGLCAIAQAESLRY+LL GLA RR
Sbjct: 169 IQESTAVIPKRSGFPEGSVELYAEKVATRGLCAIAQAESLRYRLLEGLAGRR 220
>gi|385302955|gb|EIF47058.1| 40s ribosomal protein s3 [Dekkera bruxellensis AWRI1499]
Length = 261
Score = 163 bits (412), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/117 (66%), Positives = 96/117 (82%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+A+ ISK RK VADGVF+AELNE TREL E+GY+GVEVR+TP +T++IIRA++T VLG
Sbjct: 2 VASHISKTRKLVADGVFYAELNEFFTRELPEEGYAGVEVRITPTKTDVIIRASQTAMVLG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKGRRIRELT ++QKRF F S+ LYAE+V ++GL A Q ESLR+KLL GLAVRR
Sbjct: 62 EKGRRIRELTMLLQKRFHFAPGSIVLYAERVRDKGLSAATQCESLRFKLLNGLAVRR 118
>gi|432099483|gb|ELK28641.1| 40S ribosomal protein S3 [Myotis davidii]
Length = 165
Score = 162 bits (409), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/139 (58%), Positives = 101/139 (72%), Gaps = 2/139 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA +ISKKRK VADG+F AELN+ LT+ELAEDGYSGVE++VTP +TEIII ATR QNVL
Sbjct: 1 MAVKISKKRKLVADGIFKAELNKFLTQELAEDGYSGVEIQVTPTKTEIIIWATRMQNVLS 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGL--CAIAQAESLRYKLLGGLAVRRY 118
E G+++ ELT++VQKRF E SV+ Y E V +GL CA AQAESL YKLLGGLA+
Sbjct: 61 ETGQQLWELTAMVQKRFGNSEGSVDFYDETVATKGLLVCATAQAESLHYKLLGGLAMLWA 120
Query: 119 ILIISQILSNKALRSCGLM 137
+ Q + + C +M
Sbjct: 121 FYSMLQFIMESRAKGCKVM 139
>gi|406867161|gb|EKD20200.1| ribosomal protein S3 [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 319
Score = 161 bits (408), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/130 (63%), Positives = 93/130 (71%), Gaps = 13/130 (10%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISK+RKFVADGVFFAELNE RELAE+GY IIRAT TQ VLGE+GR
Sbjct: 82 ISKRRKFVADGVFFAELNEFFQRELAEEGY-------------FIIRATHTQEVLGEQGR 128
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + +
Sbjct: 129 RIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLR 188
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 189 FIMESGAKGC 198
>gi|328867452|gb|EGG15834.1| 40S ribosomal protein S3 [Dictyostelium fasciculatum]
Length = 219
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
QISKKRKFVADGVF AELNE+ TRE +D GYSGVE++ P TEI IRA++TQ ++GE
Sbjct: 7 QISKKRKFVADGVFHAELNELFTREFNKDEGYSGVELKQGPASTEITIRASKTQAIVGEN 66
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
RR+ EL S+VQKRF F E +V ++AEKV NRGLCA+AQAESL+ KLL GL VRR I
Sbjct: 67 ARRVHELCSLVQKRFGFKEGAVTIFAEKVQNRGLCAVAQAESLKIKLLAGLPVRRACYAI 126
Query: 123 SQILSNKALRSC 134
+ K + C
Sbjct: 127 LHQVMTKGAKGC 138
>gi|41057930|gb|AAR98922.1| ribosomal protein S3, partial [Ostrinia nubilalis]
gi|441415027|dbj|BAM74497.1| ribosomal protein S3, partial [Ostrinia scapulalis]
Length = 125
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/106 (76%), Positives = 87/106 (82%)
Query: 29 LAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYA 88
LAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEKGRRIRELTSVVQKRF PE SVELYA
Sbjct: 1 LAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYA 60
Query: 89 EKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
EKV RGLCAIAQAESLRYKL+GGLAVRR + + + R C
Sbjct: 61 EKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGC 106
>gi|78190549|gb|ABB29596.1| ribosomal protein 3 small subunit [Platynereis dumerilii]
Length = 188
Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/106 (76%), Positives = 87/106 (82%)
Query: 29 LAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYA 88
LAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELTSVVQKRF F E +VELYA
Sbjct: 1 LAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFQEGTVELYA 60
Query: 89 EKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
EKV RGLCAIAQAESLRYKL+GGLAVRR + + + + C
Sbjct: 61 EKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGC 106
>gi|67467661|ref|XP_649921.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS]
gi|67484576|ref|XP_657508.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS]
gi|56466448|gb|EAL44535.1| 40S ribosomal protein S3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56474761|gb|EAL52118.1| 40S ribosomal protein S3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449702147|gb|EMD42841.1| 40S ribosomal protein S3 [Entamoeba histolytica KU27]
gi|449710680|gb|EMD49710.1| 40S ribosomal protein S3 [Entamoeba histolytica KU27]
Length = 244
Score = 159 bits (401), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 102/134 (76%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL+ DGYSGVEVR + +IIIRATRT N++G
Sbjct: 15 LKTNISRKHKFVADGVFYAELNELLQRELSADGYSGVEVRKNGSKFQIIIRATRTTNIIG 74
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
+KGRRI ELT+++ RF FP++ +ELY EKV RGLC ++QAES++YK+ GL VRR +
Sbjct: 75 DKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLPVRRAVG 134
Query: 121 IISQILSNKALRSC 134
+ +++ + + C
Sbjct: 135 SVMRLIMDSGAKGC 148
>gi|66800843|ref|XP_629347.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4]
gi|74834663|sp|P90526.1|RS3_DICDI RecName: Full=40S ribosomal protein S3
gi|1688320|gb|AAB36959.1| RpgG [Dictyostelium discoideum]
gi|60462650|gb|EAL60852.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4]
Length = 218
Score = 158 bits (400), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/132 (60%), Positives = 99/132 (75%), Gaps = 1/132 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
QISKKRKFVADGVF AELNE+ TRE +D GYSGVE++ +P TEIIIRA++TQ V+G
Sbjct: 6 QISKKRKFVADGVFHAELNELFTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVGPN 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
RRI+EL S+VQKRF F E +V L+AEK+ NRGLCA+AQAESL+ KLL GL VR+ I
Sbjct: 66 ARRIQELCSLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACYAI 125
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 126 VHQIMTRGAKGC 137
>gi|290977385|ref|XP_002671418.1| predicted protein [Naegleria gruberi]
gi|284084987|gb|EFC38674.1| predicted protein [Naegleria gruberi]
Length = 228
Score = 158 bits (399), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 77/113 (68%), Positives = 92/113 (81%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
I+KK+ FV G+ +AELNE L RELAEDGYSGVEVR T RTEIIIRATR Q V+G+ GR
Sbjct: 7 INKKKHFVHQGLLYAELNEFLKRELAEDGYSGVEVRATVARTEIIIRATRPQTVVGDNGR 66
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
R++ELTSV+QKRF F E +ELYAE V N+GL AIAQAESL+ KL+ G+AVR+
Sbjct: 67 RMKELTSVIQKRFGFEEGKIELYAENVKNKGLSAIAQAESLKQKLMEGVAVRK 119
>gi|440906791|gb|ELR57014.1| 40S ribosomal protein S3 [Bos grunniens mutus]
Length = 220
Score = 157 bits (398), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/118 (70%), Positives = 91/118 (77%), Gaps = 1/118 (0%)
Query: 1 MATQISK-KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
MA QISK + F DG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRT+N L
Sbjct: 1 MAVQISKIESVFEEDGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTENAL 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G++G RI+E T VVQKR FPE +V LYAEKV LCAI QAESL Y+L GGL V R
Sbjct: 61 GKEGWRIQEFTVVVQKRCGFPECTVALYAEKVATGNLCAIVQAESLHYRLPGGLTVPR 118
>gi|167394938|ref|XP_001741154.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760]
gi|165894380|gb|EDR22402.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760]
Length = 250
Score = 157 bits (398), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 101/134 (75%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL+ DGYSGVEVR + +IIIRATRT N++G
Sbjct: 21 LKTNISRKHKFVADGVFYAELNELLQRELSADGYSGVEVRKNGSKFQIIIRATRTTNIIG 80
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
+KGRRI ELT+++ RF FP++ +ELY EKV RGLC ++QAES++YK+ GL VRR +
Sbjct: 81 DKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLPVRRAVG 140
Query: 121 IISQILSNKALRSC 134
+ +++ + C
Sbjct: 141 SVMRLIMESGAKGC 154
>gi|167389197|ref|XP_001738857.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760]
gi|165897685|gb|EDR24767.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760]
Length = 244
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/134 (55%), Positives = 101/134 (75%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL+ DGYSGVEVR + +IIIRATRT N++G
Sbjct: 15 LKTNISRKHKFVADGVFYAELNELLQRELSADGYSGVEVRKNGSKFQIIIRATRTTNIIG 74
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
+KGRRI ELT+++ RF FP++ +ELY EKV RGLC ++QAES++YK+ GL VRR +
Sbjct: 75 DKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLPVRRAVG 134
Query: 121 IISQILSNKALRSC 134
+ +++ + C
Sbjct: 135 SVMRLIMESGAKGC 148
>gi|426375157|ref|XP_004054412.1| PREDICTED: 40S ribosomal protein S3-like [Gorilla gorilla
gorilla]
Length = 110
Score = 157 bits (397), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/92 (86%), Positives = 82/92 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAE G SGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEHGCSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVN 92
EKGRRIRELT+VVQKRF FPE SVELYAEK N
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVELYAEKCN 92
>gi|340056073|emb|CCC50402.1| putative 40S ribosomal protein S3 [Trypanosoma vivax Y486]
gi|340057730|emb|CCC52077.1| putative 40S ribosomal protein S3 [Trypanosoma vivax Y486]
Length = 214
Score = 157 bits (396), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 99/130 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
ISKKR V DG+F+AEL E L RELA+DG++GVE RVTP RTEI+IRAT+T+ VLGEK R
Sbjct: 4 ISKKRMMVRDGIFYAELFEFLKRELADDGFAGVEHRVTPQRTEIVIRATKTREVLGEKNR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+ +Q+RF + E V+LYAE+V RGL A+AQAESLR+KLL L VRR + I +
Sbjct: 64 RIRELTACIQQRFNYKEGKVQLYAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 ILSNKALRSC 134
++ + C
Sbjct: 124 LVMESGAKGC 133
>gi|215260017|gb|ACJ64493.1| 40S ribosomal protein S3 [Culex tarsalis]
Length = 221
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/105 (74%), Positives = 85/105 (80%)
Query: 30 AEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAE 89
AEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF F +VELYAE
Sbjct: 1 AEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPGTVELYAE 60
Query: 90 KVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
KV RGLCAIAQAESLRYKL+GGLAVRR + + + + C
Sbjct: 61 KVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGC 105
>gi|330840814|ref|XP_003292404.1| 40S ribosomal protein S3 [Dictyostelium purpureum]
gi|325077360|gb|EGC31078.1| 40S ribosomal protein S3 [Dictyostelium purpureum]
Length = 218
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/132 (59%), Positives = 98/132 (74%), Gaps = 1/132 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
Q+SKKRKFV DGVF AELNE+ TRE +D GYSGVE++ +P TEIIIRA++TQ V+G
Sbjct: 6 QMSKKRKFVLDGVFHAELNELFTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVGPN 65
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILII 122
RRI+EL S+VQKRF F E +V L+AEK+ NRGLCA+AQAESL+ KLL GL VR+ I
Sbjct: 66 ARRIQELCSLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACYAI 125
Query: 123 SQILSNKALRSC 134
+ + + C
Sbjct: 126 VHQIMTRGAKGC 137
>gi|71748612|ref|XP_823361.1| 40S ribosomal protein S3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|449802224|pdb|3ZEY|X Chain X, High-resolution Cryo-electron Microscopy Structure Of The
Trypanosoma Brucei Ribosome
gi|70833029|gb|EAN78533.1| 40S ribosomal protein S3, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
gi|261333299|emb|CBH16294.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 214
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 99/130 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA+DG++GVE RVTP RTEI+IR+T+T+ VLGEKGR
Sbjct: 4 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRR + I +
Sbjct: 64 RIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 124 YVMESGAKGC 133
>gi|160331719|ref|XP_001712566.1| rps3 [Hemiselmis andersenii]
gi|159766015|gb|ABW98241.1| rps3 [Hemiselmis andersenii]
Length = 246
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 65/117 (55%), Positives = 99/117 (84%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M ++SK++KF+ DGVFF+ELNE+L+REL+++GY+ VE+R P++TEII++ T+T ++LG
Sbjct: 30 MNKKLSKQKKFINDGVFFSELNELLSRELSDEGYTNVEIRKAPLKTEIILKMTQTHSILG 89
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+GRRI+E+ +++KRF+F E S+E+Y EK+ N+ LCAI+QAESLRYKLL G+ +RR
Sbjct: 90 SRGRRIKEINGLIKKRFQFDEKSLEIYVEKIINKNLCAISQAESLRYKLLRGMVIRR 146
>gi|261331251|emb|CBH14241.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 266
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 99/130 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA+DG++GVE RVTP RTEI+IR+T+T+ VLGEKGR
Sbjct: 56 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 115
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRR + I +
Sbjct: 116 RIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 175
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 176 YVMESGAKGC 185
>gi|71744718|ref|XP_826989.1| 40S ribosomal protein S3 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70831154|gb|EAN76659.1| 40S ribosomal protein S3, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 266
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 99/130 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA+DG++GVE RVTP RTEI+IR+T+T+ VLGEKGR
Sbjct: 56 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 115
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRR + I +
Sbjct: 116 RIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 175
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 176 YVMESGAKGC 185
>gi|440301734|gb|ELP94120.1| 40S ribosomal protein S3-1, putative [Entamoeba invadens IP1]
Length = 246
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 72/134 (53%), Positives = 99/134 (73%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ T IS+K KFVADGVF+AELNE+L REL DGYSGVE+R + +IIIRATR N++G
Sbjct: 15 LKTNISRKHKFVADGVFYAELNELLQRELCADGYSGVEIRKNANKFQIIIRATRASNIIG 74
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
+KGRRIRELTS++ RF F +N +EL+ EKV +RGLC ++QAES++YK+ G+ VRR +
Sbjct: 75 DKGRRIRELTSLMISRFGFKKNCLELFVEKVASRGLCPVSQAESIKYKIAEGVPVRRAVG 134
Query: 121 IISQILSNKALRSC 134
+ +++ C
Sbjct: 135 SVMKLIMESGALGC 148
>gi|342183330|emb|CCC92810.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 151 bits (382), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 98/130 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA DG++GVE RVTP+RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMMVRDGVFYAELFEFLKRELAVDGFAGVEHRVTPMRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+ +Q+RF + E ++L+ E+V RGL A+AQAESLR+KLL L VRR + I +
Sbjct: 64 RIRELTACLQQRFNYKEGKLQLFVERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 124 YVMESGAKGC 133
>gi|342184715|emb|CCC94197.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 214
Score = 151 bits (382), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 98/130 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELA DG++GVE RVTP+RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMMVRDGVFYAELFEFLKRELAVDGFAGVEHRVTPMRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+ +Q+RF + E ++L+ E+V RGL A+AQAESLR+KLL L VRR + I +
Sbjct: 64 RIRELTACLQQRFNYKEGKLQLFVERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 124 YVMESGAKGC 133
>gi|149068851|gb|EDM18403.1| rCG40478, isoform CRA_m [Rattus norvegicus]
Length = 98
Score = 151 bits (381), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/85 (89%), Positives = 78/85 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVE 85
EKGRRIRELT+VVQKRF FPE SVE
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVE 85
>gi|407844367|gb|EKG01924.1| 40S ribosomal protein S3, putative, partial [Trypanosoma cruzi]
Length = 160
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 98/130 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRR + I +
Sbjct: 64 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 124 HVMESGAKGC 133
>gi|407409823|gb|EKF32505.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi marinkellei]
Length = 253
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 98/130 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 43 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 102
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRR + I +
Sbjct: 103 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 162
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 163 HVMESGAKGC 172
>gi|71406574|ref|XP_805815.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|70869366|gb|EAN83964.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407405323|gb|EKF30377.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi marinkellei]
Length = 214
Score = 150 bits (380), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 98/130 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRR + I +
Sbjct: 64 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 124 HVMESGAKGC 133
>gi|260946855|ref|XP_002617725.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849579|gb|EEQ39043.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 242
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 90/113 (79%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR T +TE+I++A+ TQ VLGE+GR
Sbjct: 9 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTNTKTEVIVKASNTQGVLGEQGR 68
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RI ELTS++ KRFK P++ + +YAE+V R L A QAE+L+ KLL GL +RR
Sbjct: 69 RIHELTSLIVKRFKLPQDGIVIYAERVEERALSAAVQAEALKAKLLSGLPIRR 121
>gi|71408264|ref|XP_806547.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|71653987|ref|XP_815622.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|71656239|ref|XP_816670.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|70870324|gb|EAN84696.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|70880689|gb|EAN93771.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|70881813|gb|EAN94819.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407844360|gb|EKG01918.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407849237|gb|EKG04048.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|407867308|gb|EKG08545.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
Length = 214
Score = 150 bits (379), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/130 (57%), Positives = 98/130 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELA+DG++GVE RVT RTEI+IRAT+T+ VLGEKGR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+ +Q+RF + E ++L+AE+V RGL A+AQAESLR+KLL L VRR + I +
Sbjct: 64 RIRELTACLQQRFHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 124 HVMESGAKGC 133
>gi|444729886|gb|ELW70289.1| 40S ribosomal protein S3-A [Tupaia chinensis]
Length = 174
Score = 149 bits (377), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/100 (76%), Positives = 84/100 (84%)
Query: 6 SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
+K RKFV G+F AELNE LT+ELA+DGYSGVE RVTP RTEIII ATRTQNVLGEKG++
Sbjct: 75 AKNRKFVTYGIFKAELNEFLTQELAKDGYSGVEGRVTPTRTEIIILATRTQNVLGEKGQQ 134
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 105
RELT+V+QKRF FPE SVELYAEKV R L AI QAESL
Sbjct: 135 TRELTAVIQKRFGFPEGSVELYAEKVATRSLFAIVQAESL 174
>gi|448103770|ref|XP_004200121.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
gi|359381543|emb|CCE82002.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 73/113 (64%), Positives = 89/113 (78%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGERGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RI ELTS++ KRFK + V +YAE+V RGL A QAE+L+ KLL GL +RR
Sbjct: 66 RIHELTSLICKRFKISQEGVVIYAERVEERGLSAAVQAEALKAKLLNGLPIRR 118
>gi|290562954|gb|ADD38871.1| 40S ribosomal protein S3-B [Lepeophtheirus salmonis]
Length = 229
Score = 149 bits (375), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 72/131 (54%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT+ + RKF+ G+F AEL+E+L RELAEDGYSG+ VR T +TE+II AT+TQNVLG
Sbjct: 1 MATKETTTRKFIKAGLFKAELDEMLKRELAEDGYSGIMVRGTHPKTEVIISATKTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
++ +RIRELTS+++KRF F + ++ LYA+KV RG+ A+AQAESL+Y+L GG+ VR+
Sbjct: 61 DESKRIRELTSLIEKRFAFEQGTLSLYADKVAVRGISAVAQAESLKYRLTGGMPVRKACY 120
Query: 121 -IISQILSNKA 130
++ QI+ ++A
Sbjct: 121 AVLKQIMESEA 131
>gi|149641402|ref|XP_001506205.1| PREDICTED: 40S ribosomal protein S3-A-like, partial
[Ornithorhynchus anatinus]
Length = 85
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/85 (88%), Positives = 77/85 (90%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA ISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVPISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVE 85
EKGRRIRELT+VVQKRF FPE SVE
Sbjct: 61 EKGRRIRELTAVVQKRFGFPEGSVE 85
>gi|300176595|emb|CBK24260.2| unnamed protein product [Blastocystis hominis]
Length = 239
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 73/114 (64%), Positives = 92/114 (80%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
++SKKR+ VADGVF+AEL+E+L RELAE GYSGV +R + ++TEIIIRA R Q ++GE
Sbjct: 5 RVSKKRQCVADGVFYAELDELLNRELAEVGYSGVSIRKSTMKTEIIIRAPRPQEIIGENS 64
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRI ELT++VQKRF F EN+V LYAE+V R LCA QAE+L+Y+LL GL VRR
Sbjct: 65 RRINELTALVQKRFGFNENNVVLYAERVAERSLCAQTQAEALKYRLLAGLPVRR 118
>gi|50427849|ref|XP_462537.1| 40S ribosomal protein S3 [Debaryomyces hansenii CBS767]
gi|49658207|emb|CAG91047.1| DEHA2G22770p [Debaryomyces hansenii CBS767]
Length = 239
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 89/113 (78%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPTKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RI ELTS++ KRFK + + +YAE+V RGL A QAE+L+ KLL GL +RR
Sbjct: 66 RIHELTSLICKRFKISQEGIVIYAERVEERGLSAAVQAEALKSKLLNGLPLRR 118
>gi|448526764|ref|XP_003869393.1| Rps3 ribosomal protein S3 [Candida orthopsilosis Co 90-125]
gi|380353746|emb|CCG23258.1| Rps3 ribosomal protein S3 [Candida orthopsilosis]
Length = 247
Score = 148 bits (373), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 89/115 (77%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T +SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+
Sbjct: 5 TILSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQ 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
GRRI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RR
Sbjct: 65 GRRIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLNGLPIRR 119
>gi|241958636|ref|XP_002422037.1| 40S ribosomal protein S3 [Candida dubliniensis CD36]
gi|223645382|emb|CAX40038.1| ribosomal protein, small subunit, putative [Candida dubliniensis
CD36]
Length = 254
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 88/113 (77%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRR 118
>gi|126132980|ref|XP_001383015.1| 40S ribosomal protein S3 [Scheffersomyces stipitis CBS 6054]
gi|126094840|gb|ABN64986.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 87/113 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPTKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RI ELTS++ KRFK + +YAE+V RGL A QAE L+ KLL GL +RR
Sbjct: 66 RIHELTSLLVKRFKLSPEGIVIYAERVEERGLSAAVQAEGLKAKLLSGLPIRR 118
>gi|354546036|emb|CCE42765.1| hypothetical protein CPAR2_204080 [Candida parapsilosis]
Length = 247
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 89/115 (77%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
T +SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+
Sbjct: 5 TILSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQ 64
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
GRRI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RR
Sbjct: 65 GRRIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKTKLLNGLPIRR 119
>gi|149238902|ref|XP_001525327.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450820|gb|EDK45076.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239]
Length = 247
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 88/113 (77%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLNGLPIRR 118
>gi|255721609|ref|XP_002545739.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404]
gi|240136228|gb|EER35781.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404]
Length = 248
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 87/113 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RI ELTS++ KRFK + +YAE+V RGL A QAE L+ KLL GL +RR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEGLKAKLLNGLPIRR 118
>gi|68490130|ref|XP_711114.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|68490165|ref|XP_711097.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|46432373|gb|EAK91858.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|46432391|gb|EAK91875.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|238879938|gb|EEQ43576.1| 40S ribosomal protein S3 [Candida albicans WO-1]
Length = 251
Score = 148 bits (373), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 88/113 (77%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RI ELTS++ KRFK + +YAE+V RGL A QAE+L+ KLL GL +RR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRR 118
>gi|448100073|ref|XP_004199265.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
gi|359380687|emb|CCE82928.1| Piso0_002691 [Millerozyma farinosa CBS 7064]
Length = 235
Score = 147 bits (372), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 89/113 (78%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGERGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+I ELTS++ KRFK + + +YAE+V RGL A QAE+L+ KLL GL +RR
Sbjct: 66 KIHELTSLICKRFKISQEGIVIYAERVEERGLSAAVQAEALKAKLLNGLPIRR 118
>gi|241865275|gb|ACS68715.1| 40S RPS3B [Sonneratia alba]
gi|241865508|gb|ACS68786.1| RPS3B [Sonneratia alba]
Length = 156
Score = 147 bits (371), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/91 (80%), Positives = 79/91 (86%)
Query: 44 VRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAE 103
+RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAE
Sbjct: 1 MRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAE 60
Query: 104 SLRYKLLGGLAVRRYILIISQILSNKALRSC 134
SLRYKLLGGLAVRR + + + + + C
Sbjct: 61 SLRYKLLGGLAVRRACYGVLRFVMDSGAKGC 91
>gi|146420499|ref|XP_001486205.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC
6260]
gi|146389620|gb|EDK37778.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC
6260]
Length = 238
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 88/113 (77%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + E+I++A+ TQ VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RI ELTS++ KRFK + +YAE++ RGL A QAE+L+ KLL GL +RR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIVIYAERIEERGLSAAVQAEALKSKLLNGLPMRR 118
>gi|300121261|emb|CBK21641.2| unnamed protein product [Blastocystis hominis]
gi|300176039|emb|CBK23350.2| unnamed protein product [Blastocystis hominis]
Length = 239
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/118 (62%), Positives = 94/118 (79%), Gaps = 1/118 (0%)
Query: 1 MATQ-ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVL 59
M++Q ISKK + VADGVF+AEL+E+L REL+E GYSGV +R + ++TEIIIRA R Q ++
Sbjct: 1 MSSQRISKKHQCVADGVFYAELDELLNRELSEVGYSGVSIRKSTMKTEIIIRAPRPQEII 60
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
GE RRI ELT++VQKRF F EN+V LYAE+V R LCA QAE+L+Y+LL GL VRR
Sbjct: 61 GENSRRINELTALVQKRFGFNENNVVLYAERVAERSLCAQTQAEALKYRLLAGLPVRR 118
>gi|78190655|gb|ABB29649.1| ribosomal protein 3 small subunit [Suberites fuscus]
Length = 176
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 73/100 (73%), Positives = 81/100 (81%)
Query: 35 SGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNR 94
SGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FP+ +VELYAEKV R
Sbjct: 1 SGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFSFPDGTVELYAEKVAAR 60
Query: 95 GLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
GLCAIAQ ESLRYKL+GGLAVRR + + + + C
Sbjct: 61 GLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGC 100
>gi|290349642|dbj|BAI77929.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|290349644|dbj|BAI77930.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 165
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 74/101 (73%), Positives = 81/101 (80%)
Query: 34 YSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNN 93
YSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF F +VELYAEKV
Sbjct: 1 YSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPGTVELYAEKVAT 60
Query: 94 RGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
RGLCAIAQAESLRYKL+GGLAVRR + + + + C
Sbjct: 61 RGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGC 101
>gi|344303916|gb|EGW34165.1| hypothetical protein SPAPADRAFT_49231 [Spathaspora passalidarum
NRRL Y-27907]
Length = 246
Score = 146 bits (369), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/113 (61%), Positives = 87/113 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKK+K VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQAVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RI ELTS++ KRFK V +YAE++ R L A QAE+L+ KLL GL +RR
Sbjct: 66 RIHELTSLITKRFKLSPEGVAIYAERIEERALSAAVQAEALKAKLLSGLPIRR 118
>gi|226476712|emb|CAX72248.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 91/114 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRK 119
>gi|226476708|emb|CAX72246.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476710|emb|CAX72247.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476714|emb|CAX72249.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476718|emb|CAX72251.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476722|emb|CAX72253.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476724|emb|CAX72254.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476726|emb|CAX72255.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476728|emb|CAX72256.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476730|emb|CAX72257.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476732|emb|CAX72258.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476734|emb|CAX72259.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482826|emb|CAX79380.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482828|emb|CAX79381.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482830|emb|CAX79382.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482832|emb|CAX79383.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482834|emb|CAX79384.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482838|emb|CAX79386.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482840|emb|CAX79387.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482842|emb|CAX79388.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482844|emb|CAX79389.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482846|emb|CAX79390.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482848|emb|CAX79391.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482850|emb|CAX79392.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482856|emb|CAX79395.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482858|emb|CAX79396.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482860|emb|CAX79397.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482862|emb|CAX79398.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482866|emb|CAX79400.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482868|emb|CAX79401.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 91/114 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRK 119
>gi|226476736|emb|CAX72260.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 91/114 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRK 119
>gi|189502878|gb|ACE06820.1| unknown [Schistosoma japonicum]
Length = 230
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 91/114 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRK 119
>gi|29841430|gb|AAP06462.1| similar to GenBank Accession Number AK010678 ribosomal protein S3
in Mus musculus [Schistosoma japonicum]
Length = 226
Score = 146 bits (368), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 91/114 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRK 119
>gi|226476720|emb|CAX72252.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 145 bits (367), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 91/114 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESLRYKL GL VR+
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTLRGLSAIAQAESLRYKLTYGLPVRK 119
>gi|226482824|emb|CAX79379.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 91/114 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESL+YKL GL VR+
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESLKYKLTYGLPVRK 119
>gi|226482836|emb|CAX79385.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 90/114 (78%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSV+QKRF FP ++ L+AEK+ RGL AIAQAESLRYKL GL VR+
Sbjct: 66 RRIRELTSVLQKRFGFPNGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRK 119
>gi|226482864|emb|CAX79399.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 75/114 (65%), Positives = 90/114 (78%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKFV GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFVKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAE LRYKL GL VR+
Sbjct: 66 RRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAEPLRYKLTYGLPVRK 119
>gi|410039268|ref|XP_003950581.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-like [Pan
troglodytes]
Length = 238
Score = 144 bits (364), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/117 (64%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M QISKKRKFV DG+ EL + TRELAEDGYSGVEV++ RTEIII AT+TQNVLG
Sbjct: 1 MGVQISKKRKFVTDGILKVELKKFXTRELAEDGYSGVEVQIMSTRTEIIILATKTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
EKG +I++L +VVQKR PE SVEL+A KV RG+C A ES Y LLGGLA +R
Sbjct: 61 EKGWQIQKLPAVVQKRSGXPEGSVELFAGKVATRGMCVFAXVESQCY-LLGGLAAQR 116
>gi|344231772|gb|EGV63654.1| ribosomal protein S3 [Candida tenuis ATCC 10573]
gi|344231773|gb|EGV63655.1| hypothetical protein CANTEDRAFT_114699 [Candida tenuis ATCC 10573]
Length = 237
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 86/113 (76%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK VADGVF+AELNE TRELAE GY+GVEVR TP + EII++A+ Q VLGE+GR
Sbjct: 6 LSKKRKLVADGVFYAELNEFFTRELAEHGYAGVEVRRTPTKLEIIVKASNPQGVLGEQGR 65
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+I ELTS++ KRFK + V +YAE+V RGL A QAE L+ KLL GL RR
Sbjct: 66 KIHELTSLICKRFKLAKEGVVIYAERVEIRGLSAAVQAEGLKAKLLSGLPFRR 118
>gi|358336359|dbj|GAA54888.1| small subunit ribosomal protein S3e [Clonorchis sinensis]
Length = 230
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 91/114 (79%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
++S KRKF+ GVF AEL+E L RELAEDGYSGV+VR + TE+II AT+TQ+VLGE
Sbjct: 6 KMSLKRKFIKAGVFKAELDEFLKRELAEDGYSGVQVRESRKYTEVIILATKTQSVLGEGC 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSV++KRF F E ++EL AEK+ RGL AIAQAESLRYKL GL VR+
Sbjct: 66 RRIRELTSVLEKRFGFAEGTLELCAEKMTFRGLSAIAQAESLRYKLTYGLPVRK 119
>gi|78190807|gb|ABB29725.1| ribosomal protein 3 small subunit [Monosiga brevicollis]
Length = 190
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 84/107 (78%)
Query: 28 ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87
ELAEDGY+GVE++ TP TEI+I ATRTQ+VLGEKGRRIRELT+ +QKRF F ++ VEL+
Sbjct: 1 ELAEDGYAGVEIKKTPKSTEIVILATRTQHVLGEKGRRIRELTAFIQKRFGFQKDEVELF 60
Query: 88 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
AEKV NRGLCA+AQ E+LRYKL GGLAVRR + + + + C
Sbjct: 61 AEKVANRGLCAVAQCENLRYKLTGGLAVRRACYGVVRFVMESGAKGC 107
>gi|256075800|ref|XP_002574204.1| 40S ribosomal protein S3 [Schistosoma mansoni]
gi|238659403|emb|CAZ30437.1| 40S ribosomal protein S3, putative [Schistosoma mansoni]
Length = 230
Score = 142 bits (357), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 90/114 (78%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKF+ GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 6 KISLKRKFIKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSV+QKRF F + ++ L+AEK+ RGL AIAQAESLRYKL GL VR+
Sbjct: 66 RRIRELTSVLQKRFGFADGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRK 119
>gi|289724874|gb|ADD18372.1| 40S ribosomal protein S3 [Glossina morsitans morsitans]
Length = 225
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/114 (64%), Positives = 90/114 (78%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+IS KRKF+ GVF AEL+E L RELA+DGYSG +VR + TE+II AT+TQ+VLGE
Sbjct: 1 KISLKRKFIKAGVFKAELDEFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGS 60
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RRIRELTSV+QKRF F + ++ L+AEK+ RGL AIAQAESLRYKL GL VR+
Sbjct: 61 RRIRELTSVLQKRFGFADGTLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRK 114
>gi|28189751|dbj|BAC56490.1| similar to ribosomal protein S3 [Bos taurus]
Length = 77
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 70/77 (90%), Positives = 72/77 (93%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRF 77
EKGRRIRELT+VVQKRF
Sbjct: 61 EKGRRIRELTAVVQKRF 77
>gi|89513159|gb|ABD74442.1| ribosomal protein S3 [Anopheles quadrimaculatus]
Length = 111
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/99 (71%), Positives = 78/99 (78%)
Query: 36 GVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRG 95
GVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF F +VELYAEKV RG
Sbjct: 1 GVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFDFAPGTVELYAEKVATRG 60
Query: 96 LCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
LCAIAQAESLR KL+GGLAVRR + + + + C
Sbjct: 61 LCAIAQAESLRCKLIGGLAVRRACYGVLRFIMESGAKGC 99
>gi|154343872|ref|XP_001567880.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065214|emb|CAM40641.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 219
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 93/130 (71%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELAE+G+SGV +T +RTEI+I+AT+T+ VLG GR
Sbjct: 4 LSKKRMIVRDGVFYAELFEFLKRELAEEGFSGVSYHITTLRTEIVIKATKTREVLGVNGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRR + I +
Sbjct: 64 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 124 YVMESGAKGC 133
>gi|159163349|pdb|1WH9|A Chain A, Solution Structure Of The Kh Domain Of Human Ribosomal
Protein S3
Length = 92
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/79 (88%), Positives = 71/79 (89%)
Query: 17 FFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKR 76
F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKR
Sbjct: 8 FKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKR 67
Query: 77 FKFPENSVELYAEKVNNRG 95
F FPE SVELYAEKV RG
Sbjct: 68 FGFPEGSVELYAEKVATRG 86
>gi|154334600|ref|XP_001563547.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060568|emb|CAM42116.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 219
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 93/130 (71%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR V DGVF+AEL E L RELAE+G+SGV +T +RTEI+I+AT+T+ VLG GR
Sbjct: 4 LSKKRMIVRDGVFYAELFEFLKRELAEEGFSGVSYHITTLRTEIVIKATKTREVLGVNGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRR + I +
Sbjct: 64 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 124 YVMESGAKGC 133
>gi|146082044|ref|XP_001464434.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|146097654|ref|XP_001468174.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|157866908|ref|XP_001682009.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|157874873|ref|XP_001685848.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|401418259|ref|XP_003873621.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|401427716|ref|XP_003878341.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|68125460|emb|CAJ03321.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|68128921|emb|CAJ06157.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|134068526|emb|CAM66821.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|134072541|emb|CAM71255.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|322489852|emb|CBZ25113.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494589|emb|CBZ29891.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 219
Score = 139 bits (349), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 93/130 (71%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELAE+G+SGV VT +RTEI+I+AT+T+ VLG GR
Sbjct: 4 LSKKRMIIRDGVFYAELFEFLKRELAEEGFSGVSYHVTTLRTEIVIKATKTREVLGVNGR 63
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRR + I +
Sbjct: 64 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 123
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 124 YVMESGAKGC 133
>gi|398021515|ref|XP_003863920.1| 40S ribosomal protein S3, putative [Leishmania donovani]
gi|322502154|emb|CBZ37237.1| 40S ribosomal protein S3, putative [Leishmania donovani]
Length = 342
Score = 139 bits (349), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 70/130 (53%), Positives = 93/130 (71%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKR + DGVF+AEL E L RELAE+G+SGV VT +RTEI+I+AT+T+ VLG GR
Sbjct: 127 LSKKRMIIRDGVFYAELFEFLKRELAEEGFSGVSYHVTTLRTEIVIKATKTREVLGVNGR 186
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQ 124
RIRELT+ +Q+RF + E ++LY E+V RGL A+AQ ESLR+KLL L VRR + I +
Sbjct: 187 RIRELTACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIR 246
Query: 125 ILSNKALRSC 134
+ + C
Sbjct: 247 YVMESGAKGC 256
>gi|281206799|gb|EFA80983.1| 40S ribosomal protein S3 [Polysphondylium pallidum PN500]
Length = 221
Score = 138 bits (348), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 79/134 (58%), Positives = 96/134 (71%), Gaps = 3/134 (2%)
Query: 4 QISKKRK--FVADGVFFAELNEVLTRELAED-GYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+I KK + FVADGVF AELNE+ TRE +D GYSGVE++ P TEIIIRA++TQ ++G
Sbjct: 7 KIEKKWRVVFVADGVFHAELNELFTREFNKDEGYSGVELKTGPASTEIIIRASKTQAIVG 66
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
+ RRI EL S+VQKRF F E +V LYAEKV NRGLCAIAQA+SL+ KLL GL VRR
Sbjct: 67 QNARRIHELCSLVQKRFGFAEGTVTLYAEKVQNRGLCAIAQADSLKGKLLLGLPVRRACY 126
Query: 121 IISQILSNKALRSC 134
I + K + C
Sbjct: 127 AIVHQIMTKGAKGC 140
>gi|149068841|gb|EDM18393.1| rCG40478, isoform CRA_c [Rattus norvegicus]
Length = 105
Score = 137 bits (346), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/77 (89%), Positives = 71/77 (92%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRF 77
EKGRRIRELT+VVQKR
Sbjct: 61 EKGRRIRELTAVVQKRH 77
>gi|148684441|gb|EDL16388.1| ribosomal protein S3, isoform CRA_c [Mus musculus]
Length = 97
Score = 135 bits (341), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/98 (73%), Positives = 77/98 (78%), Gaps = 6/98 (6%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEIII ATRTQNVLG
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCA 98
EKGRRIRELT+VVQ P ++ +NR L A
Sbjct: 61 EKGRRIRELTAVVQNHQPCPSQCLQ------HNRVLAA 92
>gi|6540574|gb|AAF16402.1| ribosomal protein RPS3 [Musca domestica]
Length = 165
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/100 (68%), Positives = 76/100 (76%)
Query: 35 SGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNR 94
GVEVRVTP RTEIII AT+TQ VLGEKGRRIRELT++VQKRF F +ELYAEKV R
Sbjct: 2 PGVEVRVTPARTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFSFEPGRIELYAEKVATR 61
Query: 95 GLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
GLCAIAQAESLRYKL GGLAVRR + + + + C
Sbjct: 62 GLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGC 101
>gi|399949695|gb|AFP65353.1| 40S ribosomal protein S3 [Chroomonas mesostigmatica CCMP1168]
Length = 217
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 90/117 (76%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M + +S K+KF+ DGVFF+ELNE L +EL+E+GY+ VE+R TP++ EII++ T++ ++
Sbjct: 1 MKSILSIKKKFIIDGVFFSELNEFLCKELSEEGYANVEIRKTPLKIEIILKMTQSYTIMS 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
KGRRI E++++++KRF F +N + L+ EK+ NRGL A +QAE LRYKL+ G+ R+
Sbjct: 61 YKGRRIGEISAMIKKRFNFGDNFISLFVEKIINRGLSANSQAELLRYKLVKGIITRK 117
>gi|239505101|gb|ACR78696.1| ribosomal protein S3 [Rimicaris exoculata]
Length = 126
Score = 129 bits (323), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/92 (69%), Positives = 73/92 (79%)
Query: 43 PVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQA 102
P RTEIII ATRTQNVLGE+GRRIRELTS+VQKRF F + +VELYAEKV RGLCAIAQA
Sbjct: 1 PARTEIIILATRTQNVLGEEGRRIRELTSLVQKRFGFADGTVELYAEKVAQRGLCAIAQA 60
Query: 103 ESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
ESLRYKL+GGLAVRR + + + + C
Sbjct: 61 ESLRYKLVGGLAVRRACYGVLRFIMESGAKGC 92
>gi|145536261|ref|XP_001453858.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421591|emb|CAK86461.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/131 (48%), Positives = 95/131 (72%), Gaps = 1/131 (0%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A Q++KK+KFVADGVF AEL+ L+R L + GY+G VR TPV+T+I I+A T V G
Sbjct: 4 ARQMNKKKKFVADGVFQAELHSFLSRALTDAGYAGFVVRTTPVQTDIEIKAANTAGVTGP 63
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI-L 120
+GR++RELTS++QKRF + + +++L +V ++GLCA AQAESL+ KLL + VR
Sbjct: 64 EGRKLRELTSLIQKRFGYAKEALQLIVARVQSKGLCAPAQAESLKTKLLAQVPVRTAANA 123
Query: 121 IISQILSNKAL 131
++ QI+++ A+
Sbjct: 124 VLKQIMADGAI 134
>gi|145541820|ref|XP_001456598.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424410|emb|CAK89201.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 94/129 (72%), Gaps = 1/129 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q++KK+KFVADGVF AEL+ L+R L + GY+G VR TPV+T+I I+A T V G +G
Sbjct: 6 QMNKKKKFVADGVFQAELHSFLSRALTDAGYAGFVVRTTPVQTDIEIKAANTAGVTGPEG 65
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI-LII 122
R++RELTS++QKRF + + +++L +V ++GLCA AQAESL+ KLL + VR ++
Sbjct: 66 RKLRELTSLIQKRFGYAKEALQLIVARVQSKGLCAPAQAESLKTKLLAQVPVRTAANAVL 125
Query: 123 SQILSNKAL 131
QI+++ A+
Sbjct: 126 KQIMADGAI 134
>gi|164598968|gb|ABX72228.2| ribosomal protein S3 [Ostrinia furnacalis]
Length = 166
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/87 (73%), Positives = 69/87 (79%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
III ATRTQ+VLGEKGRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRY
Sbjct: 1 IIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRY 60
Query: 108 KLLGGLAVRRYILIISQILSNKALRSC 134
KL+GGLAVRR + + + R C
Sbjct: 61 KLIGGLAVRRACYGVLRFIMESGARGC 87
>gi|340505471|gb|EGR31795.1| hypothetical protein IMG5_102040 [Ichthyophthirius multifiliis]
Length = 676
Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 62/128 (48%), Positives = 93/128 (72%), Gaps = 1/128 (0%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QI+KK+KFVADGVF AEL+ ++ L + GY+G+EVR TP++ EI I+AT+ Q+V+G +G
Sbjct: 7 QINKKKKFVADGVFNAELHCFFSKSLQDAGYAGIEVRRTPMKIEIRIKATKPQHVIGLEG 66
Query: 64 RRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI-LII 122
++ +ELT +QKRF + + +++ AE V N+GLCA AQ E+L YKLL + VR II
Sbjct: 67 KKHKELTYFLQKRFGYANDQLQILAEPVKNKGLCASAQVEALNYKLLKDVPVRLAANYII 126
Query: 123 SQILSNKA 130
Q++++ A
Sbjct: 127 RQVINDGA 134
>gi|229594319|ref|XP_001030083.3| KH domain containing protein [Tetrahymena thermophila]
gi|319443358|pdb|2XZM|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
gi|319443393|pdb|2XZN|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
gi|225566935|gb|EAR82420.3| KH domain containing protein [Tetrahymena thermophila SB210]
gi|315570297|tpg|DAA33967.1| TPA_exp: 40S ribosomal protein rpS3e [Tetrahymena thermophila]
Length = 243
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/112 (49%), Positives = 84/112 (75%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
I+KK+KFVADGVF AEL+ ++ L + GY+G+EVR TP +TEI I+AT+ Q V+G +G+
Sbjct: 8 INKKKKFVADGVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGK 67
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR 116
+ +ELT +QKRF + ++ ++++AE + +GLCA AQ E++ YKLL + VR
Sbjct: 68 KHKELTQFLQKRFGYSDDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVR 119
>gi|355567874|gb|EHH24215.1| hypothetical protein EGK_07837 [Macaca mulatta]
Length = 207
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/134 (52%), Positives = 76/134 (56%), Gaps = 36/134 (26%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA QISKKRKFV DG+F AELNE LT ELAE+ YSGVE
Sbjct: 1 MAVQISKKRKFVTDGMFKAELNEFLTWELAEECYSGVE---------------------- 38
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
KRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 39 --------------KRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACY 84
Query: 121 IISQILSNKALRSC 134
+ Q + + C
Sbjct: 85 GVLQFIMESGAKGC 98
>gi|198456485|ref|XP_002136327.1| GA25150, partial [Drosophila pseudoobscura pseudoobscura]
gi|198142674|gb|EDY71398.1| GA25150, partial [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 63/94 (67%), Positives = 71/94 (75%)
Query: 41 VTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIA 100
VTP RTEIII AT+TQ VLGEKGRRIRELT++VQKRF F +ELYAEKV RGLCAIA
Sbjct: 1 VTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIA 60
Query: 101 QAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
QAESLRYKL GGLAVRR + + + + C
Sbjct: 61 QAESLRYKLTGGLAVRRACYGVLRFIIESGAKGC 94
>gi|95116517|gb|ABF56171.1| 40S ribosomal protein S3 [Theobroma cacao]
Length = 86
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/80 (77%), Positives = 67/80 (83%)
Query: 58 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 1 VLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 60
Query: 118 YILIISQILSNKALRSCGLM 137
+ + + + C +M
Sbjct: 61 ACYGVLRFIMESGAKGCEVM 80
>gi|330040462|ref|XP_003239924.1| 40S ribosomal protein S3 [Cryptomonas paramecium]
gi|327206850|gb|AEA39026.1| 40S ribosomal protein S3 [Cryptomonas paramecium]
Length = 210
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/113 (50%), Positives = 88/113 (77%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S K+K VADGVFF+E+NE+L+REL E+GYSG+E++ + ++TE+I++ RT+ ++ G+
Sbjct: 2 LSGKKKIVADGVFFSEVNELLSRELREEGYSGMELKKSSIKTELILKTVRTKQMIISGGK 61
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RIRE+T +V+KRF ++++ +Y EKV NRGL + QAE LRYKLL G+ R+
Sbjct: 62 RIREITLLVKKRFGLEDSNLNIYVEKVINRGLVSSIQAEFLRYKLLKGITTRK 114
>gi|403340419|gb|EJY69494.1| 40S ribosomal protein S3 [Oxytricha trifallax]
Length = 243
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 97/138 (70%), Gaps = 4/138 (2%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
+I+ K+KFVADGVF AELNE LTR L DGY+G+EVR T + TEI ++AT+T+ +L +
Sbjct: 11 KINTKKKFVADGVFQAELNEFLTRCLGMDGYAGIEVRATSMSTEIRVKATKTREILEKSA 70
Query: 64 RRIRELTSVVQKRFKFP--ENSVELYAEKVN-NRGLCAIAQAESLRYKLLGGLAVRRYI- 119
R++REL S+++KR+ F +N VEL + + ++ LCA AQAE+L+YKLLGG VR
Sbjct: 71 RKVRELKSLIEKRYNFNDVDNKVELAIKPLPYDKNLCAAAQAENLKYKLLGGTPVRLAAN 130
Query: 120 LIISQILSNKALRSCGLM 137
I++Q++ + C ++
Sbjct: 131 NILAQVMKRGGAKGCEII 148
>gi|426369809|ref|XP_004051876.1| PREDICTED: 40S ribosomal protein S3 isoform 3 [Gorilla gorilla
gorilla]
Length = 206
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%)
Query: 54 RTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL 113
RTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGL
Sbjct: 17 RTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGL 76
Query: 114 AVRRYILIISQILSNKALRSC 134
AVRR + + + + C
Sbjct: 77 AVRRACYGVLRFIMESGAKGC 97
>gi|147810849|emb|CAN71792.1| hypothetical protein VITISV_022106 [Vitis vinifera]
Length = 252
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/62 (95%), Positives = 62/62 (100%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MATQ+SKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTP+RTEIIIRATRTQNVLG
Sbjct: 1 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60
Query: 61 EK 62
+K
Sbjct: 61 KK 62
>gi|123444699|ref|XP_001311117.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123456864|ref|XP_001316164.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123476890|ref|XP_001321615.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123483338|ref|XP_001324008.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|154413076|ref|XP_001579569.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|154415577|ref|XP_001580813.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|121892915|gb|EAX98187.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121898863|gb|EAY03941.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121904445|gb|EAY09392.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121906883|gb|EAY11785.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121913777|gb|EAY18583.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121915034|gb|EAY19827.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
Length = 216
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/133 (42%), Positives = 90/133 (67%)
Query: 2 ATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGE 61
A + +K R+ + G+F+AELNE+LTREL ++GY G EVR TP RTEIII+A T+ +
Sbjct: 3 AQRCTKVRRIIETGLFYAELNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFVDN 62
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
GRR++E+ ++QKR++ E+S+E++ +++ +GL A+ Q ESLRYKL+ + RR
Sbjct: 63 HGRRLQEVRMMIQKRWRLKEDSLEIFIDRIQRKGLSALNQLESLRYKLIARIPARRAAYS 122
Query: 122 ISQILSNKALRSC 134
I + + + R C
Sbjct: 123 IIRFVMDAGARGC 135
>gi|402584605|gb|EJW78546.1| hypothetical protein WUBG_10543 [Wuchereria bancrofti]
Length = 103
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRK V DG+F AELN L +ELAEDGYSGVEVR TP R EIII ATRTQ+VLGE+GR
Sbjct: 1 MSKKRKAVQDGIFKAELNNFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERGR 60
Query: 65 RIRELTSVVQKRFKFPENSVEL-YAEKVNNRGLCAIAQAES 104
RIRELTSVVQKRF F + +VE+ Y N + +S
Sbjct: 61 RIRELTSVVQKRFGFADGTVEVCYGHLPPNHSISVEVHTKS 101
>gi|148684439|gb|EDL16386.1| ribosomal protein S3, isoform CRA_a [Mus musculus]
Length = 135
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/81 (74%), Positives = 65/81 (80%)
Query: 54 RTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGL 113
RTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGL
Sbjct: 8 RTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGL 67
Query: 114 AVRRYILIISQILSNKALRSC 134
AVRR + + + + C
Sbjct: 68 AVRRACYGVLRFIMESGAKGC 88
>gi|402586120|gb|EJW80058.1| 30S ribosomal protein S3 [Wuchereria bancrofti]
Length = 202
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 58/71 (81%), Positives = 65/71 (91%)
Query: 47 EIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLR 106
+III ATRTQ+VLGE+GRRIRELTSVVQKRF F + +VELYAEKV NRGLCA+AQ ESLR
Sbjct: 2 QIIILATRTQSVLGERGRRIRELTSVVQKRFGFADGTVELYAEKVTNRGLCAVAQCESLR 61
Query: 107 YKLLGGLAVRR 117
YKL+GGLAVRR
Sbjct: 62 YKLVGGLAVRR 72
>gi|238613775|ref|XP_002398529.1| hypothetical protein MPER_00865 [Moniliophthora perniciosa FA553]
gi|215475235|gb|EEB99459.1| hypothetical protein MPER_00865 [Moniliophthora perniciosa FA553]
Length = 100
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 60/70 (85%), Positives = 63/70 (90%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
IIIRAT TQ VLGEKGRRIRELT++VQKRFKFPENS+ELYAEKV RGL AIAQ ESLRY
Sbjct: 1 IIIRATHTQEVLGEKGRRIRELTALVQKRFKFPENSLELYAEKVQYRGLSAIAQCESLRY 60
Query: 108 KLLGGLAVRR 117
KLL GLAVRR
Sbjct: 61 KLLNGLAVRR 70
>gi|343887316|dbj|BAK61862.1| 40S ribosomal protein S3 [Citrus unshiu]
Length = 184
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/58 (98%), Positives = 57/58 (98%)
Query: 60 GEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
GEKGRRIRELTS VQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR
Sbjct: 3 GEKGRRIRELTSAVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 60
>gi|115389474|ref|XP_001212242.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624]
gi|114194638|gb|EAU36338.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624]
Length = 263
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 57/86 (66%), Positives = 66/86 (76%)
Query: 49 IIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYK 108
+IRAT TQ VLGE+GRRIRELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYK
Sbjct: 49 VIRATHTQEVLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYK 108
Query: 109 LLGGLAVRRYILIISQILSNKALRSC 134
LL GLAVRR + + + + C
Sbjct: 109 LLNGLAVRRACYGVLRFIMESGAKGC 134
>gi|326914668|ref|XP_003203646.1| PREDICTED: 40S ribosomal protein S3-like, partial [Meleagris
gallopavo]
Length = 63
Score = 116 bits (291), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/63 (92%), Positives = 59/63 (93%)
Query: 55 TQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLA 114
TQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLA
Sbjct: 1 TQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLA 60
Query: 115 VRR 117
VRR
Sbjct: 61 VRR 63
>gi|162605846|ref|XP_001713438.1| 40S ribosomal protein S3 [Guillardia theta]
gi|13794370|gb|AAK39747.1|AF083031_104 40S ribosomal protein S3 [Guillardia theta]
Length = 218
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 88/117 (75%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
+ ++S K+KFVADGV ++E+NE L REL E+G+SG++++ + EIII++++ ++G
Sbjct: 2 LGYRLSLKKKFVADGVVYSEINEFLERELKENGFSGIKIKKKIEKVEIIIKSSKAHTIIG 61
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
KG+RIREL +++KRF F EN + LY EK+NNR LC I QAESLRYK+L G +R+
Sbjct: 62 FKGKRIRELNVLLKKRFNFGENKLVLYVEKINNRNLCPINQAESLRYKILRGFVLRK 118
>gi|296083751|emb|CBI23740.3| unnamed protein product [Vitis vinifera]
Length = 458
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 64/73 (87%)
Query: 45 RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAES 104
EIII AT+TQNVLG+KGR+IRELTSVVQKRF+F EN+VELYAEK NNR AIAQAES
Sbjct: 328 HMEIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLENNVELYAEKFNNRVFYAIAQAES 387
Query: 105 LRYKLLGGLAVRR 117
LR+KLLGGL VRR
Sbjct: 388 LRFKLLGGLVVRR 400
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 7/78 (8%)
Query: 46 TEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 105
TEIII AT+TQNVL +KG++IRELTSVVQKRF + E + + LC + A+S+
Sbjct: 110 TEIIIHATQTQNVLCKKGKKIRELTSVVQKRFVMESGTKG--CEVIMSGKLC-VQCAKSI 166
Query: 106 RYK----LLGGLAVRRYI 119
++K + G V+ YI
Sbjct: 167 KFKDGYLIFSGQLVKDYI 184
>gi|224154183|ref|XP_002337443.1| predicted protein [Populus trichocarpa]
gi|222839282|gb|EEE77619.1| predicted protein [Populus trichocarpa]
Length = 73
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/57 (98%), Positives = 56/57 (98%)
Query: 62 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY 118
KGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY
Sbjct: 2 KGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY 58
>gi|390988241|gb|AFM36762.1| ribosomal protein S3, partial [Agrotis ipsilon]
Length = 192
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 57/79 (72%), Positives = 62/79 (78%)
Query: 56 QNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV 115
Q+VLGEKGRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAV
Sbjct: 6 QSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAV 65
Query: 116 RRYILIISQILSNKALRSC 134
RR + + + R C
Sbjct: 66 RRACYGVLRFIMESGARGC 84
>gi|256073701|ref|XP_002573167.1| 40S ribosomal protein S3 [Schistosoma mansoni]
gi|360045524|emb|CCD83072.1| putative 40s ribosomal protein S3 [Schistosoma mansoni]
Length = 152
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 81/118 (68%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
EL+E L RELA+DGYS +VR + TE+II AT+TQ+VLGE RIREL SV+QKRF F
Sbjct: 3 ELDEFLKRELADDGYSASQVRESRKYTEVIILATKTQSVLGEDSLRIRELASVLQKRFGF 62
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSCGLM 137
+ ++ L+ +K+ RGL AIAQAESLRYKL GL VR+ I + + R G++
Sbjct: 63 SDCALGLFVDKMIFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIIESGARGVGVI 120
>gi|302142415|emb|CBI19618.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/69 (76%), Positives = 62/69 (89%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+SKKRKF DGVFFA LNEVLTREL E+GYSG EVRVTP+ TEIIIRAT+T NVLGEKG+
Sbjct: 1 MSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLGEKGK 60
Query: 65 RIRELTSVV 73
+I+ELTS++
Sbjct: 61 KIKELTSLL 69
>gi|238683661|gb|ACR54109.1| ribosomal protein S3 [Palaemonetes varians]
Length = 189
Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 54/80 (67%), Positives = 63/80 (78%)
Query: 55 TQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLA 114
TQNVLGEKGRRIRELTS+VQ+RF F + +VELYAEKV RGLCAIAQAESLRYKL+GGLA
Sbjct: 1 TQNVLGEKGRRIRELTSLVQRRFGFADGTVELYAEKVAQRGLCAIAQAESLRYKLVGGLA 60
Query: 115 VRRYILIISQILSNKALRSC 134
VRR + + + + C
Sbjct: 61 VRRACYGVLRFIMESGAKGC 80
>gi|294880038|ref|XP_002768878.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239871826|gb|EER01596.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 106
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/60 (85%), Positives = 57/60 (95%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
Q+SKKRKFVADGVF+AELNE+LT LAEDGYSGVEVRVTP++TEIIIRATRT+ VLGEKG
Sbjct: 9 QVSKKRKFVADGVFYAELNELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKG 68
>gi|294939314|ref|XP_002782408.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239894014|gb|EER14203.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 244
Score = 105 bits (262), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 57/62 (91%)
Query: 56 QNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAV 115
+ VLGEKGRRIRELT++V++RF FPENSVEL+AE+V+NR LCA AQAESLRYKLLGGL V
Sbjct: 46 RKVLGEKGRRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPV 105
Query: 116 RR 117
RR
Sbjct: 106 RR 107
>gi|9967236|dbj|BAB12320.1| hypothetical protein [Macaca fascicularis]
Length = 83
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 55/73 (75%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
Query: 48 IIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRY 107
+II ATRT+N+LGEKGR IRELT+VVQK F FPE SVELYA+KV RG IAQAESLRY
Sbjct: 1 MIILATRTENILGEKGRWIRELTAVVQKTFGFPEGSVELYADKVATRGR-DIAQAESLRY 59
Query: 108 KLLGGLAVRRYIL 120
K LGGLAVRR L
Sbjct: 60 KFLGGLAVRRAWL 72
>gi|226482822|emb|CAX79378.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 202
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/72 (69%), Positives = 60/72 (83%)
Query: 46 TEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 105
TE+II AT+TQ+VLGE RRIRELTSV+QKRF FP+ ++ L+AEK+ RGL AIAQAESL
Sbjct: 20 TEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDGTLGLFAEKMTFRGLSAIAQAESL 79
Query: 106 RYKLLGGLAVRR 117
RYKL GL VR+
Sbjct: 80 RYKLTYGLPVRK 91
>gi|350588289|ref|XP_003357250.2| PREDICTED: hypothetical protein LOC100627821 [Sus scrofa]
Length = 203
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/57 (84%), Positives = 51/57 (89%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQN 57
MA QISKKRKFVADG+F AELNE LTRELAEDGYSGVEVRVTP RTEII+ ATR Q+
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIMLATRNQS 57
>gi|379072588|gb|AFC92926.1| ribosomal protein S3B, partial [Pipa carvalhoi]
gi|379072590|gb|AFC92927.1| ribosomal protein S3B, partial [Rhinophrynus dorsalis]
Length = 162
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 53/69 (76%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQI 125
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR + +
Sbjct: 1 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 60
Query: 126 LSNKALRSC 134
+ + C
Sbjct: 61 IMESGAKGC 69
>gi|3642663|gb|AAC36521.1| ribosomal protein S3, partial [Mus musculus]
Length = 123
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/69 (69%), Positives = 53/69 (76%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQI 125
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR + +
Sbjct: 1 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 60
Query: 126 LSNKALRSC 134
+ + C
Sbjct: 61 IMESGAKGC 69
>gi|351707112|gb|EHB10031.1| 40S ribosomal protein S3 [Heterocephalus glaber]
Length = 127
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 51/69 (73%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQI 125
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAV R +
Sbjct: 2 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVLRACYGVLWF 61
Query: 126 LSNKALRSC 134
+ + C
Sbjct: 62 IMESGAKGC 70
>gi|152061033|gb|AAI50502.1| RPS3 protein [Homo sapiens]
Length = 133
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/67 (68%), Positives = 51/67 (76%)
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILS 127
ELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRR + + +
Sbjct: 12 ELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 71
Query: 128 NKALRSC 134
+ C
Sbjct: 72 ESGAKGC 78
>gi|149064299|gb|EDM14502.1| rCG46746 [Rattus norvegicus]
Length = 77
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/64 (75%), Positives = 53/64 (82%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QISK RK VA+G+F AELNE LT+ELAEDG+SGVEV VT RTEI I ATRTQ+VLGEKG
Sbjct: 2 QISKNRKSVAEGIFKAELNEFLTQELAEDGHSGVEVWVTLTRTEINISATRTQDVLGEKG 61
Query: 64 RRIR 67
IR
Sbjct: 62 HGIR 65
>gi|326901602|gb|AEA10079.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
Length = 194
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 49/67 (73%)
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILS 127
ELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + + +
Sbjct: 1 ELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIM 60
Query: 128 NKALRSC 134
+ C
Sbjct: 61 ESGAKGC 67
>gi|326901586|gb|AEA10071.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901588|gb|AEA10072.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901590|gb|AEA10073.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901592|gb|AEA10074.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901594|gb|AEA10075.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901596|gb|AEA10076.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901598|gb|AEA10077.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901600|gb|AEA10078.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901604|gb|AEA10080.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901606|gb|AEA10081.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901608|gb|AEA10082.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901610|gb|AEA10083.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901612|gb|AEA10084.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901614|gb|AEA10085.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901616|gb|AEA10086.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901618|gb|AEA10087.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901620|gb|AEA10088.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901622|gb|AEA10089.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901624|gb|AEA10090.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901626|gb|AEA10091.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901628|gb|AEA10092.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901630|gb|AEA10093.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901632|gb|AEA10094.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901634|gb|AEA10095.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901636|gb|AEA10096.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901638|gb|AEA10097.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901640|gb|AEA10098.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901642|gb|AEA10099.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901644|gb|AEA10100.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901646|gb|AEA10101.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901648|gb|AEA10102.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901650|gb|AEA10103.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901652|gb|AEA10104.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901654|gb|AEA10105.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901656|gb|AEA10106.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901658|gb|AEA10107.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901660|gb|AEA10108.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901662|gb|AEA10109.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901664|gb|AEA10110.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901666|gb|AEA10111.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901668|gb|AEA10112.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901670|gb|AEA10113.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901672|gb|AEA10114.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901674|gb|AEA10115.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901676|gb|AEA10116.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901678|gb|AEA10117.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901680|gb|AEA10118.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901682|gb|AEA10119.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901684|gb|AEA10120.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901686|gb|AEA10121.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901688|gb|AEA10122.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901690|gb|AEA10123.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901692|gb|AEA10124.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901694|gb|AEA10125.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901696|gb|AEA10126.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901698|gb|AEA10127.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901700|gb|AEA10128.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901702|gb|AEA10129.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901704|gb|AEA10130.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901706|gb|AEA10131.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901708|gb|AEA10132.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901710|gb|AEA10133.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901712|gb|AEA10134.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901714|gb|AEA10135.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901716|gb|AEA10136.1| 40S ribosomal protein S3 [Leptographium longiclavatum]
gi|326901718|gb|AEA10137.1| 40S ribosomal protein S3 [Leptographium longiclavatum]
gi|326901720|gb|AEA10138.1| 40S ribosomal protein S3 [Leptographium wingfieldii]
gi|326901722|gb|AEA10139.1| 40S ribosomal protein S3 [Leptographium wingfieldii]
gi|326901724|gb|AEA10140.1| 40S ribosomal protein S3 [Grosmannia aurea]
Length = 194
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/67 (62%), Positives = 49/67 (73%)
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILS 127
ELTS++QKRFKFPENSV LYA KV NRGL A+AQ ESLRYKLL GLAVRR + + +
Sbjct: 1 ELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIM 60
Query: 128 NKALRSC 134
+ C
Sbjct: 61 ESGAKGC 67
>gi|303390809|ref|XP_003073635.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506]
gi|303302782|gb|ADM12275.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506]
Length = 227
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 78/129 (60%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
++F+ +G+ AEL E + L +G++ +E+R+ +II++ + +GEK R+++
Sbjct: 19 KRFMKNGLMNAELKEFFEKALVNEGFNTMELRMQETPIKIILKVAKPHEAIGEKKYRLKQ 78
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSN 128
+V +R + P+ +VE+ EKV+ +GLCA+ QA +R K+LGG+ RR + + + + +
Sbjct: 79 FQHLVAQRLEVPDENVEIIVEKVHEKGLCALIQANFIREKMLGGVQYRRSVNMALKAVRH 138
Query: 129 KALRSCGLM 137
+ C ++
Sbjct: 139 SGAQGCQII 147
>gi|401828611|ref|XP_003888019.1| 40S ribosomal protein S3 [Encephalitozoon hellem ATCC 50504]
gi|392999027|gb|AFM99038.1| 40S ribosomal protein S3 [Encephalitozoon hellem ATCC 50504]
Length = 216
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 77/129 (59%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
++F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+++
Sbjct: 8 KRFMKNGLINAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKIRLKQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSN 128
+V +R + P+ +VE+ EKV+ +GLCA+ QA +R K+LGG+ RR + + + +
Sbjct: 68 FQHLVAQRLEVPDENVEIVVEKVHEKGLCALIQANFIREKMLGGVQYRRAVNMALKATRH 127
Query: 129 KALRSCGLM 137
+ C ++
Sbjct: 128 SGAQGCQII 136
>gi|85014361|ref|XP_955676.1| 40S ribosomal protein S3 [Encephalitozoon cuniculi GB-M1]
gi|51701889|sp|Q8SQM3.1|RS3_ENCCU RecName: Full=40S ribosomal protein S3
gi|449330262|gb|AGE96522.1| 40S ribosomal protein S3 [Encephalitozoon cuniculi]
Length = 228
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
+F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+R+
Sbjct: 21 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 80
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
+ +R + P+ SVE+ EKV+ +GLCA+ QA +R K+LGG+ RR +
Sbjct: 81 QHLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAV 130
>gi|392513001|emb|CAD27095.2| 40S RIBOSOMAL PROTEIN S3 [Encephalitozoon cuniculi GB-M1]
Length = 216
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 68/110 (61%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
+F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+R+
Sbjct: 9 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 68
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
+ +R + P+ SVE+ EKV+ +GLCA+ QA +R K+LGG+ RR +
Sbjct: 69 QHLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAV 118
>gi|396082067|gb|AFN83679.1| 40S ribosomal protein S3 [Encephalitozoon romaleae SJ-2008]
Length = 216
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 77/129 (59%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
++F+ +G+ AEL E + L +G+S +E+R+ +II++ + +GEK R+++
Sbjct: 8 KRFMKNGLINAELKEFFEKVLVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKLRLKQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSN 128
+V +R + P+ +VE+ EKV+ +GLCA+ QA +R K+LGG+ RR + + + +
Sbjct: 68 FQHLVAQRLEVPDENVEIIVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKATRH 127
Query: 129 KALRSCGLM 137
+ C ++
Sbjct: 128 SGAQGCQII 136
>gi|395539389|ref|XP_003771653.1| PREDICTED: LOW QUALITY PROTEIN: 40S ribosomal protein S3-like
[Sarcophilus harrisii]
Length = 361
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/117 (50%), Positives = 67/117 (57%), Gaps = 27/117 (23%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M QI+KKR F ADG+F E E LTR++AEDGYSGV P RTEII+ ATRT +LG
Sbjct: 1 MVVQIAKKRNFAADGIFKPEX-EFLTRKVAEDGYSGVRY---PTRTEIILLATRT--LLG 54
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+ LT VVQK F FPE + A SL YKLLGGLAV R
Sbjct: 55 HX--KFVNLTPVVQK-FGFPE------------------SNATSLCYKLLGGLAVCR 90
>gi|310771967|emb|CBH28921.1| 40S ribosomal protein S3 [Anncaliia algerae]
Length = 216
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 71/123 (57%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
+ G+ AEL+E + EL E+GY G+++++ + +I IR + ++V+G+K R+ +
Sbjct: 12 IQKGLMHAELDEFFSIELKEEGYGGMDIKLHEMPVQITIRVNKPEDVMGDKKSRLNLIKH 71
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKAL 131
++ +RF + VE+ E + N+GLC + QA+ +R KL G+ RR + + + +
Sbjct: 72 LLMQRFPLLSSGVEINVEMIKNKGLCPMTQADFIRVKLFSGIPFRRAVHAAMKSIKDGGA 131
Query: 132 RSC 134
+ C
Sbjct: 132 QGC 134
>gi|300708361|ref|XP_002996361.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01]
gi|239605657|gb|EEQ82690.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01]
Length = 214
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 68/109 (62%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+KF+ADG+ FAEL E+ + L +G+S +E+R+ ++I++ + Q ++G+K +I +
Sbjct: 8 KKFIADGMIFAELKELFEKCLINEGFSSLELRLEESPVKVILKVVKPQELIGDKKWKIVQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+ +V R P+++V + +KV +GLC + QA +R K+L + +R
Sbjct: 68 IQHLVASRLSLPDSNVVVIIDKVVEKGLCPVYQANLIREKMLANIPHKR 116
>gi|440493994|gb|ELQ76410.1| 40S ribosomal protein S3 [Trachipleistophora hominis]
Length = 214
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 71/122 (58%), Gaps = 11/122 (9%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
+A G+ +AELNE +EL E GYS ++ V +IIIR +T +++ E R++++TS
Sbjct: 14 IATGIAYAELNEFFGKELMESGYSSMKFLAHEVPLKIIIRVLKTDDLINENRYRLKQITS 73
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKAL 131
+V+KR K V + E V ++GLC QAE +R K+ GLA RR + N AL
Sbjct: 74 LVKKRLK---KDVTILVEMVKDKGLCPNVQAEYIRKKMSEGLAYRRAV--------NGAL 122
Query: 132 RS 133
R+
Sbjct: 123 RT 124
>gi|443917610|gb|ELU38287.1| 40S ribosomal protein S3 [Rhizoctonia solani AG-1 IA]
Length = 592
Score = 78.6 bits (192), Expect = 9e-13, Method: Composition-based stats.
Identities = 38/48 (79%), Positives = 41/48 (85%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEI 48
MA+QISKKRKFVADGVF AEL E TRELAE+GYSG EVRVT RTE+
Sbjct: 285 MASQISKKRKFVADGVFRAELGEFFTRELAEEGYSGCEVRVTHARTEV 332
>gi|323307522|gb|EGA60793.1| Rps3p [Saccharomyces cerevisiae FostersO]
Length = 184
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 52/74 (70%)
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
+ GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RR
Sbjct: 5 KNGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAY 64
Query: 121 IISQILSNKALRSC 134
+ + + + C
Sbjct: 65 GVVRYVMESGAKGC 78
>gi|387594476|gb|EIJ89500.1| hypothetical protein NEQG_00270 [Nematocida parisii ERTm3]
gi|387596684|gb|EIJ94305.1| hypothetical protein NEPG_00972 [Nematocida parisii ERTm1]
Length = 244
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 65/109 (59%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
V G+ + ELNE+ ++ + DGY+G++ + EI ++ + +L + RI++L
Sbjct: 20 IVNQGLIYTELNEMFSKFMENDGYAGMDYKPYTSPIEITLKLGKPSGMLEDNKLRIKQLI 79
Query: 71 SVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
S++Q RF+ E SV ++ E+V NR L A QA+ ++ KL GL VRR +
Sbjct: 80 SLIQMRFRLEEGSVSIFIEQVKNRALNAQIQADLIKEKLGAGLPVRRVV 128
>gi|218117273|emb|CAQ37764.1| 40S ribosomal protein S3 [Echinorhynchus truttae]
Length = 71
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 46/61 (75%)
Query: 57 NVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVR 116
V+G+KGRRIREL+SVV KRF + L + KV RGLCA+ QAESLRYKL+ G+AVR
Sbjct: 1 QVVGDKGRRIRELSSVVAKRFNLKPEKLVLLSSKVEQRGLCAMTQAESLRYKLIEGVAVR 60
Query: 117 R 117
R
Sbjct: 61 R 61
>gi|429965063|gb|ELA47060.1| ribosomal protein S3 [Vavraia culicis 'floridensis']
Length = 214
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 11/122 (9%)
Query: 12 VADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTS 71
+A G+ +AELNE +EL E GYS ++ V +IIIR + +++ E R++++TS
Sbjct: 14 IATGIAYAELNEFFAKELMESGYSSMKFLAHEVPLKIIIRVLKADDLINENRYRLKQITS 73
Query: 72 VVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKAL 131
+V+KR V + E V ++GLC QAE +R K+ GL RR + N AL
Sbjct: 74 LVKKRL---NKDVTILVEMVKDKGLCPNVQAEYIRKKMSEGLTYRRAV--------NGAL 122
Query: 132 RS 133
R+
Sbjct: 123 RT 124
>gi|402466373|gb|EJW01879.1| ribosomal protein S3 [Edhazardia aedis USNM 41457]
Length = 227
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 65/111 (58%), Gaps = 1/111 (0%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATR-TQNVLGEKGRRIRE 68
+F+ +G+ +AELNE T+E DGY+G E+ + I ++ ++ T V+G RI++
Sbjct: 15 RFIKNGLIYAELNEYFTKEFYADGYAGCEIFHNSIPMRIYLKVSKPTAEVIGTNKCRIKQ 74
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
+ S++ KR +N V++ E + +GLC QA ++ +LL +VRR +
Sbjct: 75 VRSLIAKRLGMADNDVDILVEMIKKKGLCPFTQAVNIAQRLLVNASVRRAV 125
>gi|147827332|emb|CAN62175.1| hypothetical protein VITISV_001516 [Vitis vinifera]
Length = 1989
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/63 (63%), Positives = 48/63 (76%), Gaps = 2/63 (3%)
Query: 13 ADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSV 72
+D FA LNE+L R LA+DG SGVEVRV P+ TEIII AT+TQNVL ++GR REL +
Sbjct: 547 SDVSIFAGLNEMLVRRLAKDGGSGVEVRVIPMLTEIIIHATQTQNVLCKQGR--RELAAR 604
Query: 73 VQK 75
VQK
Sbjct: 605 VQK 607
>gi|296083024|emb|CBI22428.3| unnamed protein product [Vitis vinifera]
Length = 116
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/60 (65%), Positives = 47/60 (78%), Gaps = 2/60 (3%)
Query: 16 VFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQK 75
+ FA LNE+L R LA+DG SGVEVRV P+ TEIII AT+TQNVL ++GR REL + VQK
Sbjct: 11 IIFAGLNEMLVRRLAKDGGSGVEVRVIPMLTEIIIHATQTQNVLCKQGR--RELAARVQK 68
>gi|237861296|gb|ACR24221.1| 40S ribosomal protein S3 [Nosema bombycis]
gi|326562626|gb|ADZ95643.1| 40S ribosomal protein S3 [Nosema bombycis]
Length = 214
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 63/109 (57%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K +A+G+ +AE+ E + L +G+S V++R +I+++ + + GEK ++++
Sbjct: 8 KKVIANGILYAEIKEFCEKALIPEGFSSVDIRFDENPIKIVLKVVKPHELTGEKKFKLKQ 67
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
L + R PE ++ + +KV +GLC + QA ++ K+L G+ +R
Sbjct: 68 LQHLFASRLNVPEMNINIIIDKVVEKGLCPVFQANLIKEKMLAGVQYKR 116
>gi|379072592|gb|AFC92928.1| ribosomal protein S3B, partial [Hymenochirus curtipes]
Length = 152
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 42/55 (76%), Gaps = 3/55 (5%)
Query: 66 IRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
IRELT+VVQKRF FPE SVELYAEKV RGLCAIAQA ++R G V R+I+
Sbjct: 1 IRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQALAVRRACYG---VLRFIM 52
>gi|147838004|emb|CAN69383.1| hypothetical protein VITISV_017964 [Vitis vinifera]
Length = 286
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/46 (71%), Positives = 39/46 (84%)
Query: 28 ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
++ EDGYS V+VRVTP+ EII+RATRTQN L EKGRRIRELT V+
Sbjct: 139 DILEDGYSNVKVRVTPMGMEIIVRATRTQNALSEKGRRIRELTLVM 184
>gi|378756656|gb|EHY66680.1| hypothetical protein NERG_00320 [Nematocida sp. 1 ERTm2]
Length = 243
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 66/119 (55%), Gaps = 4/119 (3%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA +S V+ G+ + ELNE+ ++ + D Y+G++ + EI ++ + +L
Sbjct: 14 MADDLS----IVSQGMVYTELNEMFSKFMINDEYAGMDYKPYSSPIEITLKLGKPAGMLE 69
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
RI++L +++Q RF+ E SV ++ E+V N+ L A QA +R K+ L VRR +
Sbjct: 70 NNKLRIKQLITLIQMRFRLEEGSVSIFIEQVKNKALNAQIQANQIREKIGASLPVRRAV 128
>gi|154281921|ref|XP_001541773.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411952|gb|EDN07340.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 151
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 36/46 (78%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEII 49
ISK+RKFV GVF+A LN RELAE+GYSGVEVRVTP T+II
Sbjct: 84 DISKRRKFVVGGVFYAGLNGFFLRELAEEGYSGVEVRVTPTGTDII 129
>gi|170066762|ref|XP_001868214.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167862957|gb|EDS26340.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 222
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 41/59 (69%), Gaps = 6/59 (10%)
Query: 52 ATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLL 110
RTQNVLGE IREL +VV+KRF +EL AEKV R LCAIAQAESL YKL+
Sbjct: 41 GPRTQNVLGESDHHIRELNAVVKKRF------IELNAEKVATRSLCAIAQAESLCYKLI 93
>gi|441645490|ref|XP_003254540.2| PREDICTED: 40S ribosomal protein S3 [Nomascus leucogenys]
Length = 181
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 39/56 (69%)
Query: 79 FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
+P ++LYAEKV RGLCAIAQAESLRYKLLGGLAVRR + + + + C
Sbjct: 17 YPLLPLKLYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 72
>gi|429961737|gb|ELA41282.1| hypothetical protein VICG_01655 [Vittaforma corneae ATCC 50505]
Length = 215
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
RK++ +G+ AELNE+ + Y+G ++ +I I+ Q +GE ++ +
Sbjct: 7 RKYIQNGLIDAELNELFGKYFQAQIYAGSTIKHNQTPIKISIKVYNPQEAIGENKFKLLQ 66
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSN 128
L +++ +RF P N++++ EK+ +RGL AE LR L +R +I S I S+
Sbjct: 67 LQNMIGQRFDIPPNNIDIVFEKIADRGLEPAYHAEQLRLAFLQNKPYKR--VINSIIKSS 124
Query: 129 KALRSCGLM 137
+A + G+M
Sbjct: 125 RAAGAQGVM 133
>gi|240104054|ref|YP_002960363.1| 30S ribosomal protein S3P [Thermococcus gammatolerans EJ3]
gi|259495259|sp|C5A280.1|RS3_THEGJ RecName: Full=30S ribosomal protein S3
gi|239911608|gb|ACS34499.1| SSU ribosomal protein S3P (rps3P) [Thermococcus gammatolerans EJ3]
Length = 209
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
ELT +++++F +E+ E++ N L A QA L L G+ RR
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRR 111
>gi|223477921|ref|YP_002582383.1| 30S ribosomal protein S3e (S3p) [Thermococcus sp. AM4]
gi|214033147|gb|EEB73975.1| SSU ribosomal protein S3e (S3p) [Thermococcus sp. AM4]
Length = 209
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
ELT +++++F +E+ E++ N L A QA L L G+ RR
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRR 111
>gi|170052166|ref|XP_001862098.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167873123|gb|EDS36506.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 181
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 41/66 (62%), Gaps = 13/66 (19%)
Query: 52 ATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLG 111
RTQNVLGE RIREL ++ L+AEKV R LCAI QAESL YKL+G
Sbjct: 25 GPRTQNVLGESDHRIRELNAI-------------LFAEKVATRSLCAIVQAESLCYKLIG 71
Query: 112 GLAVRR 117
GLAV R
Sbjct: 72 GLAVCR 77
>gi|170061554|ref|XP_001866283.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167879747|gb|EDS43130.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 271
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 34/41 (82%)
Query: 15 GVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRT 55
G+F AELNE LTR+L +GYSGVEVRVTP RTEIII AT T
Sbjct: 228 GMFLAELNEFLTRQLVANGYSGVEVRVTPTRTEIIIMATCT 268
>gi|57641471|ref|YP_183949.1| 30S ribosomal protein S3 [Thermococcus kodakarensis KOD1]
gi|73918002|sp|Q5JDH5.1|RS3_PYRKO RecName: Full=30S ribosomal protein S3
gi|57159795|dbj|BAD85725.1| SSU ribosomal protein S3P [Thermococcus kodakarensis KOD1]
Length = 209
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++ I A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVTIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
ELT +++K+F +E+ E++ N L A QA L L G+ RR
Sbjct: 64 ELTRILEKQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRR 111
>gi|9022435|gb|AAF82383.1|AF281313_1 ribosomal protein S3 [Homo sapiens]
Length = 158
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 35/49 (71%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
LYAEKV RGLCAIAQAESLRYKLLGGLAVRR + + + + C
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 49
>gi|409096178|ref|ZP_11216202.1| 30S ribosomal protein S3P [Thermococcus zilligii AN1]
Length = 209
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GR+IR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAADPGYVIGRGGRKIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL-IISQIL 126
+LT V++++F +E+ E++ N L A QA L L G+ RR I I+
Sbjct: 64 DLTRVLERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIGAIM 121
Query: 127 SNKA 130
N A
Sbjct: 122 RNGA 125
>gi|170036208|ref|XP_001845957.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167878755|gb|EDS42138.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 281
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 35/46 (76%)
Query: 30 AEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQK 75
A D + VEV VT +RTEIII TRTQ VLGEKG IRELT+VVQK
Sbjct: 16 AADDFLSVEVHVTSIRTEIIIMTTRTQKVLGEKGHHIRELTAVVQK 61
>gi|390960788|ref|YP_006424622.1| 30S ribosomal protein S3 [Thermococcus sp. CL1]
gi|390519096|gb|AFL94828.1| 30S ribosomal protein S3P [Thermococcus sp. CL1]
Length = 210
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++ I A V+G GRRIR
Sbjct: 4 ERYFIKEGVKEMLIDEYLEKELRRAGYGGIDIKKTPLGTKVTIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
ELT +++++F +E+ E++ N L A QA L L G+ RR
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRR 111
>gi|332105493|gb|AEE01378.1| ribosomal protein S3 [Bubalus bubalis]
Length = 34
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/34 (88%), Positives = 31/34 (91%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGY 34
MA QISKKRKFVADG+F AELNE LTRELAEDGY
Sbjct: 1 MAVQISKKRKFVADGIFKAELNEFLTRELAEDGY 34
>gi|212223217|ref|YP_002306453.1| 30S ribosomal protein S3 [Thermococcus onnurineus NA1]
gi|254764554|sp|B6YSL9.1|RS3_THEON RecName: Full=30S ribosomal protein S3
gi|212008174|gb|ACJ15556.1| SSU ribosomal protein S3P; (rps3P) [Thermococcus onnurineus NA1]
Length = 208
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +GV ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIKEGVREMLIDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQA 102
ELT +++++F +E+ E++ N L A QA
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQA 96
>gi|170055465|ref|XP_001863594.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167875417|gb|EDS38800.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 278
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 35/46 (76%)
Query: 30 AEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQK 75
A D + VEV VT +RTEIII TRTQ VLGEKG IRELT++VQK
Sbjct: 73 AADDFLSVEVHVTSIRTEIIIMTTRTQKVLGEKGHHIRELTAIVQK 118
>gi|448475304|ref|ZP_21603022.1| 30S ribosomal protein S3P [Halorubrum aidingense JCM 13560]
gi|445816775|gb|EMA66662.1| 30S ribosomal protein S3P [Halorubrum aidingense JCM 13560]
Length = 313
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++TS ++ RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITSELEDRFGMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|359416222|ref|ZP_09208574.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
gi|358033425|gb|EHK01978.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
Length = 351
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 62/111 (55%), Gaps = 2/111 (1%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
++++F+ G +LNE L EL GYSG +++ TP T+I++ A R V+G G RI
Sbjct: 2 QEKQFIEKGAQKVKLNEFLQDELEGAGYSGFDLQRTPTSTKIVVEAQRPGLVIGRGGSRI 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
RELTS +++ F F +E+ ++ + A A+S+ L G V+R
Sbjct: 62 RELTSALEEEFDFENPQIEVN--EIEDADGDAQVVADSIADWLEKGGHVKR 110
>gi|448426501|ref|ZP_21583350.1| 30S ribosomal protein S3P [Halorubrum terrestre JCM 10247]
gi|448452129|ref|ZP_21593149.1| 30S ribosomal protein S3P [Halorubrum litoreum JCM 13561]
gi|448484340|ref|ZP_21606047.1| 30S ribosomal protein S3P [Halorubrum arcis JCM 13916]
gi|445679381|gb|ELZ31848.1| 30S ribosomal protein S3P [Halorubrum terrestre JCM 10247]
gi|445809773|gb|EMA59811.1| 30S ribosomal protein S3P [Halorubrum litoreum JCM 13561]
gi|445820115|gb|EMA69944.1| 30S ribosomal protein S3P [Halorubrum arcis JCM 13916]
Length = 314
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448508622|ref|ZP_21615573.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 9100]
gi|448517695|ref|ZP_21617269.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 10118]
gi|445697248|gb|ELZ49318.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 9100]
gi|445705910|gb|ELZ57798.1| 30S ribosomal protein S3P [Halorubrum distributum JCM 10118]
Length = 314
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|341582057|ref|YP_004762549.1| 30S ribosomal protein S3P [Thermococcus sp. 4557]
gi|340809715|gb|AEK72872.1| 30S ribosomal protein S3P [Thermococcus sp. 4557]
Length = 210
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++ I A V+G GRRIR
Sbjct: 4 ERYFIKENVRDMLIDEYLEKELRRAGYGGIDIKKTPLGTKVTIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
ELT +++++F +E+ E++ N L A QA L L G+ RR
Sbjct: 64 ELTRILERKFNLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGVHFRR 111
>gi|448535702|ref|ZP_21622222.1| 30S ribosomal protein S3P [Halorubrum hochstenium ATCC 700873]
gi|445703203|gb|ELZ55138.1| 30S ribosomal protein S3P [Halorubrum hochstenium ATCC 700873]
Length = 312
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448489446|ref|ZP_21607669.1| 30S ribosomal protein S3P [Halorubrum californiensis DSM 19288]
gi|445694818|gb|ELZ46936.1| 30S ribosomal protein S3P [Halorubrum californiensis DSM 19288]
Length = 313
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448436258|ref|ZP_21587059.1| 30S ribosomal protein S3P [Halorubrum tebenquichense DSM 14210]
gi|445682926|gb|ELZ35336.1| 30S ribosomal protein S3P [Halorubrum tebenquichense DSM 14210]
Length = 312
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448503706|ref|ZP_21613335.1| 30S ribosomal protein S3P [Halorubrum coriense DSM 10284]
gi|445691907|gb|ELZ44090.1| 30S ribosomal protein S3P [Halorubrum coriense DSM 10284]
Length = 312
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEERFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448460071|ref|ZP_21596991.1| 30S ribosomal protein S3P [Halorubrum lipolyticum DSM 21995]
gi|445807789|gb|EMA57870.1| 30S ribosomal protein S3P [Halorubrum lipolyticum DSM 21995]
Length = 314
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448463236|ref|ZP_21598014.1| 30S ribosomal protein S3P [Halorubrum kocurii JCM 14978]
gi|445817231|gb|EMA67107.1| 30S ribosomal protein S3P [Halorubrum kocurii JCM 14978]
Length = 312
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|291238325|ref|XP_002739080.1| PREDICTED: ribosomal protein S3-like [Saccoglossus kowalevskii]
Length = 250
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 34/49 (69%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
LYAEKV RGLCAIAQ ESLRYKLLGGLAVRR + + + + C
Sbjct: 71 LYAEKVAARGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 119
>gi|15668638|ref|NP_247436.1| 30S ribosomal protein S3 [Methanocaldococcus jannaschii DSM 2661]
gi|1710763|sp|P54034.1|RS3_METJA RecName: Full=30S ribosomal protein S3
gi|1591163|gb|AAB98450.1| SSU ribosomal protein S3P (rpsC) [Methanocaldococcus jannaschii DSM
2661]
Length = 208
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 18/146 (12%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +EL++ GYS ++R TP+ T+III A + V+G +G RIR
Sbjct: 3 ERTFVKENVKRLLIDEYFKKELSKAGYSHCDIRKTPIGTKIIIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCA------IAQA--ESLRYKLLGGLAVRR-- 117
ELT + K F + +++ + V N L A +AQ+ L ++ +G AVRR
Sbjct: 63 ELTETLAKEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVM 120
Query: 118 ------YILIISQILSNKALRSCGLM 137
I+IIS L+ + R+ M
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFM 146
>gi|424812835|ref|ZP_18238075.1| ribosomal protein S3, eukaryotic/archaeal type [Candidatus
Nanosalinarum sp. J07AB56]
gi|339757057|gb|EGQ40640.1| ribosomal protein S3, eukaryotic/archaeal type [Candidatus
Nanosalinarum sp. J07AB56]
Length = 366
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 5/115 (4%)
Query: 4 QISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
QI ++++FV G+ L++ L +EL GY+G + TP T+I+I A + ++G G
Sbjct: 17 QIVQEKQFVQQGIRRVNLDDFLAKELEGSGYAGSTIERTPTSTKIVITAEKPGLIIGRGG 76
Query: 64 RRIRELTSVVQKRFKFPENSVELY--AEKVNNRGLCAIAQAESLRYKLLGGLAVR 116
RIRELTS V+ F F + +E+ E +N + A AE L GG A R
Sbjct: 77 SRIRELTSDVEDEFGFEDPQIEVNEIEEPDSNAQVVANNMAEWLEK---GGSAKR 128
>gi|222480851|ref|YP_002567088.1| 30S ribosomal protein S3P [Halorubrum lacusprofundi ATCC 49239]
gi|222453753|gb|ACM58018.1| ribosomal protein S3 [Halorubrum lacusprofundi ATCC 49239]
Length = 312
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448441443|ref|ZP_21589106.1| 30S ribosomal protein S3P [Halorubrum saccharovorum DSM 1137]
gi|445688852|gb|ELZ41099.1| 30S ribosomal protein S3P [Halorubrum saccharovorum DSM 1137]
Length = 312
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++NE EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLRRSQINEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEDRFDMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|76803063|ref|YP_331158.1| 30S ribosomal protein S3P [Natronomonas pharaonis DSM 2160]
gi|91207821|sp|Q3IMY2.1|RS3_NATPD RecName: Full=30S ribosomal protein S3
gi|76558928|emb|CAI50524.1| 30S ribosomal protein S3 [Natronomonas pharaonis DSM 2160]
Length = 305
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 74/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E + EL+ GY G+EV TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIHDGLQRTQIDEFFSEELSRAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ +++ F + V++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIMESGAL 126
>gi|70909549|emb|CAJ17196.1| ribosomal protein S3e [Mycetophagus quadripustulatus]
Length = 158
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/32 (87%), Positives = 30/32 (93%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
LY EKV NRGLCAIAQAESLR+KL+GGLAVRR
Sbjct: 2 LYGEKVANRGLCAIAQAESLRFKLIGGLAVRR 33
>gi|242398285|ref|YP_002993709.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739]
gi|259495260|sp|C6A165.1|RS3_THESM RecName: Full=30S ribosomal protein S3
gi|242264678|gb|ACS89360.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739]
Length = 207
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ +G+ ++E L +EL GY G++++ TP+ T+++I R V+G GR+IR
Sbjct: 4 ERYFIKEGIKEMLIDEYLEKELRRAGYGGLDIKKTPLGTKVVIFVERPGFVIGRGGRKIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 105
ELT ++++RF +E+ E++ N A QA L
Sbjct: 64 ELTRILERRFNLENPQIEV--EEIKNSYFNAKVQATRL 99
>gi|18978191|ref|NP_579548.1| 30S ribosomal protein S3 [Pyrococcus furiosus DSM 3638]
gi|397652533|ref|YP_006493114.1| 30S ribosomal protein S3 [Pyrococcus furiosus COM1]
gi|27734507|sp|Q8U004.1|RS3_PYRFU RecName: Full=30S ribosomal protein S3
gi|428697931|pdb|3J20|C Chain C, Promiscuous Behavior Of Proteins In Archaeal Ribosomes
Revealed By Cryo-em: Implications For Evolution Of
Eukaryotic Ribosomes (30s Ribosomal Subunit)
gi|18894000|gb|AAL81943.1| SSU ribosomal protein S3P [Pyrococcus furiosus DSM 3638]
gi|393190124|gb|AFN04822.1| 30S ribosomal protein S3P [Pyrococcus furiosus COM1]
Length = 210
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQA 102
ELT +++K+F +E+ E++ N L A QA
Sbjct: 64 ELTRILEKQFGLENPQIEV--EEIKNPYLNAKVQA 96
>gi|448726788|ref|ZP_21709180.1| 30S ribosomal protein S3P [Halococcus morrhuae DSM 1307]
gi|445793834|gb|EMA44405.1| 30S ribosomal protein S3P [Halococcus morrhuae DSM 1307]
Length = 370
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E ELA GY G+++ TP+ T+I++RA + V+G+ G+
Sbjct: 1 MATEQQFIEDGMQRTQIDEFFADELARAGYGGMDLAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
IR++TS +++RF + +++ ++V+ L A A+ L L G R+
Sbjct: 61 NIRKITSELEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRK 111
>gi|344212407|ref|YP_004796727.1| 30S ribosomal protein S3P [Haloarcula hispanica ATCC 33960]
gi|343783762|gb|AEM57739.1| 30S ribosomal protein S3P [Haloarcula hispanica ATCC 33960]
Length = 304
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIMESGAL 126
>gi|148807|gb|AAA86865.1| ribosomal protein S3 [Haloarcula marismortui]
Length = 304
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIMESGAL 126
>gi|448630844|ref|ZP_21673299.1| 30S ribosomal protein S3P [Haloarcula vallismortis ATCC 29715]
gi|445755218|gb|EMA06608.1| 30S ribosomal protein S3P [Haloarcula vallismortis ATCC 29715]
Length = 304
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIMESGAL 126
>gi|307354329|ref|YP_003895380.1| 30S ribosomal protein S3 [Methanoplanus petrolearius DSM 11571]
gi|307157562|gb|ADN36942.1| ribosomal protein S3 [Methanoplanus petrolearius DSM 11571]
Length = 241
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R+FV DGV A + + L +EL GY G E+ TP+ T+I I A + V+G+ G+ +R
Sbjct: 4 ERRFVEDGVRAARVEKYLRKELKRAGYGGTEIVRTPLGTQITIYAEKPGIVIGKGGKVVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIISQIL 126
E+TS +Q + +E+ ++V N A AE L L G R+ II +I+
Sbjct: 64 EITSNLQNDYGIESPQIEV--QQVENPAFNAQIMAERLANSLERGWYFRKAGTSIIRRIM 121
Query: 127 SNKAL 131
+ AL
Sbjct: 122 ESGAL 126
>gi|448681469|ref|ZP_21691560.1| 30S ribosomal protein S3P [Haloarcula argentinensis DSM 12282]
gi|445767339|gb|EMA18442.1| 30S ribosomal protein S3P [Haloarcula argentinensis DSM 12282]
Length = 305
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIMESGAL 126
>gi|448671521|ref|ZP_21687426.1| 30S ribosomal protein S3P [Haloarcula amylolytica JCM 13557]
gi|445764983|gb|EMA16123.1| 30S ribosomal protein S3P [Haloarcula amylolytica JCM 13557]
Length = 305
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIMESGAL 126
>gi|170033439|ref|XP_001844585.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|167874323|gb|EDS37706.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 258
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 29 LAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQK 75
LA GY GVE VTP R+EIII TRTQN+LGEK IRELT++VQK
Sbjct: 101 LAAVGYFGVEFHVTPNRSEIII-TTRTQNMLGEKRHSIRELTAIVQK 146
>gi|55378378|ref|YP_136228.1| 30S ribosomal protein S3 [Haloarcula marismortui ATCC 43049]
gi|448636981|ref|ZP_21675429.1| 30S ribosomal protein S3P [Haloarcula sinaiiensis ATCC 33800]
gi|448648015|ref|ZP_21679493.1| 30S ribosomal protein S3P [Haloarcula californiae ATCC 33799]
gi|57015336|sp|P20281.2|RS3_HALMA RecName: Full=30S ribosomal protein S3; AltName: Full=HS1; AltName:
Full=HmaS3
gi|55231103|gb|AAV46522.1| 30S ribosomal protein S3P [Haloarcula marismortui ATCC 43049]
gi|445765287|gb|EMA16426.1| 30S ribosomal protein S3P [Haloarcula sinaiiensis ATCC 33800]
gi|445775885|gb|EMA26880.1| 30S ribosomal protein S3P [Haloarcula californiae ATCC 33799]
Length = 304
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIMESGAL 126
>gi|215260015|gb|ACJ64492.1| 40S ribosomal protein S3 [Culex tarsalis]
Length = 165
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 86 LYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
+YAEKV RGLCA AQAESLRYKL+GGLAVRR + + + + C
Sbjct: 1 MYAEKVATRGLCATAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGC 49
>gi|312137081|ref|YP_004004418.1| 30S ribosomal protein S3 [Methanothermus fervidus DSM 2088]
gi|311224800|gb|ADP77656.1| SSU ribosomal protein S3P [Methanothermus fervidus DSM 2088]
Length = 217
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 52/79 (65%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+++F+A+ + AE++E L +EL GY G+++++TP+ T I I A R V+G GR +R
Sbjct: 3 EKEFIAESLKRAEIDEFLEKELERAGYGGMDIQLTPLGTMITIYAERPGLVIGRGGRTVR 62
Query: 68 ELTSVVQKRFKFPENSVEL 86
LT++++KRF +E+
Sbjct: 63 RLTNILRKRFGLDNPQIEV 81
>gi|399577352|ref|ZP_10771105.1| rps3 protein [Halogranum salarium B-1]
gi|399237735|gb|EJN58666.1| rps3 protein [Halogranum salarium B-1]
Length = 309
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQKSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T +Q+RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITRELQERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448685266|ref|ZP_21693258.1| 30S ribosomal protein S3P [Haloarcula japonica DSM 6131]
gi|445781877|gb|EMA32728.1| 30S ribosomal protein S3P [Haloarcula japonica DSM 6131]
Length = 310
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++ RF + V++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIMESGAL 126
>gi|289193197|ref|YP_003459138.1| 30S ribosomal protein S3 [Methanocaldococcus sp. FS406-22]
gi|288939647|gb|ADC70402.1| ribosomal protein S3 [Methanocaldococcus sp. FS406-22]
Length = 207
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 76/146 (52%), Gaps = 18/146 (12%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +EL+ GYS ++R TP+ T+III A + V+G +G RIR
Sbjct: 3 ERTFVKENVKRLLIDEYFKKELSRAGYSHCDIRKTPIGTKIIIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCA------IAQA--ESLRYKLLGGLAVRR-- 117
ELT + K F + +++ + V N L A +AQ+ L ++ +G AVRR
Sbjct: 63 ELTEKLAKEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVM 120
Query: 118 ------YILIISQILSNKALRSCGLM 137
I+IIS L+ + R+ M
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFM 146
>gi|448737868|ref|ZP_21719901.1| 30S ribosomal protein S3P [Halococcus thailandensis JCM 13552]
gi|445802830|gb|EMA53131.1| 30S ribosomal protein S3P [Halococcus thailandensis JCM 13552]
Length = 383
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MAT+ ++F+ DG+ +++E ELA GY G+++ TP+ T+I++RA + V+G
Sbjct: 1 MATE----QEFIEDGMQRTQIDEFFADELARAGYGGMDLAKTPMGTQIVLRAEKPGMVIG 56
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+ G+ IR++TS +++RF + +++ ++V+ L A A+ L L G R+
Sbjct: 57 KGGKNIRKITSELEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRK 111
>gi|452206442|ref|YP_007486564.1| 30S ribosomal protein S3 [Natronomonas moolapensis 8.8.11]
gi|452082542|emb|CCQ35800.1| 30S ribosomal protein S3 [Natronomonas moolapensis 8.8.11]
Length = 301
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E EL+ GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQRTQIDEFFAEELSRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ +++ F + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITTTLEEDFDLDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIMDSGAL 126
>gi|337283650|ref|YP_004623124.1| 30S ribosomal protein S3P [Pyrococcus yayanosii CH1]
gi|334899584|gb|AEH23852.1| 30S ribosomal protein S3P [Pyrococcus yayanosii CH1]
Length = 210
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEYLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQA 102
ELT V++++F +E+ E++ N L A QA
Sbjct: 64 ELTRVLERQFGLENPQIEV--EEIKNPYLNAKVQA 96
>gi|315229862|ref|YP_004070298.1| 30S ribosomal protein S3e (S3p) [Thermococcus barophilus MP]
gi|315182890|gb|ADT83075.1| SSU ribosomal protein S3e (S3p) [Thermococcus barophilus MP]
Length = 207
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVKEMLIDEYLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQA 102
ELT +++++F +E+ E++ N L A QA
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYLNAKVQA 96
>gi|345005649|ref|YP_004808502.1| 30S ribosomal protein S3 [halophilic archaeon DL31]
gi|344321275|gb|AEN06129.1| ribosomal protein S3 [halophilic archaeon DL31]
Length = 312
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ ++KF+ DG+ ++++E EL GY G+++ TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQKFIEDGLQRSQIDEFFADELGRAGYGGMDIAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
IR+++S +++RF + +++ ++V+ L A A+ L L G R+
Sbjct: 61 NIRKVSSELEERFGMDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRK 111
>gi|296109315|ref|YP_003616264.1| 30S ribosomal protein S3 [methanocaldococcus infernus ME]
gi|295434129|gb|ADG13300.1| ribosomal protein S3 [Methanocaldococcus infernus ME]
Length = 211
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 18/146 (12%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E +EL + GYS E++ TP+ T++ I A R V+G +G RI+
Sbjct: 3 ERIFIKENVKKVLIDEFFKKELFKAGYSHCEIKKTPIGTKVTIYAERPGFVIGRRGSRIK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAE--------SLRYKLLGGLAVRR-- 117
ELT ++ K FK +++ + V N L A AE + ++ +G AVRR
Sbjct: 63 ELTEILAKEFKLDRPQIDV--KPVENPDLDAQVVAEKIARALERGMHFRRVGHTAVRRVM 120
Query: 118 ------YILIISQILSNKALRSCGLM 137
++IIS L+ + R+ M
Sbjct: 121 NAGAKGVVVIISGKLTGERARTEKFM 146
>gi|374630584|ref|ZP_09702969.1| SSU ribosomal protein S3P [Methanoplanus limicola DSM 2279]
gi|373908697|gb|EHQ36801.1| SSU ribosomal protein S3P [Methanoplanus limicola DSM 2279]
Length = 242
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S +++FV DGV A + + L +EL GY G E+ TP+ T++ I A + V+G+ G+
Sbjct: 1 MSVEKRFVEDGVRAARVEKFLVKELKRAGYGGTEIIRTPLGTQVTIFAEKPGIVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
+RELTS +Q + S ++ ++V N A AE L L G R+ I+
Sbjct: 61 VVRELTSTLQNDYGI--ESPQIEVQQVENPSFNAQIMAERLANSLERGWYFRKAGSSIMR 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIMESGAL 126
>gi|448411351|ref|ZP_21575816.1| 30S ribosomal protein S3P [Halosimplex carlsbadense 2-9-1]
gi|445670539|gb|ELZ23138.1| 30S ribosomal protein S3P [Halosimplex carlsbadense 2-9-1]
Length = 319
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G+EV TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFADELGRAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
IR++T+ +++RF + V++ ++V+ L A A+ L L G R+
Sbjct: 61 NIRKVTTELEERFDLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRK 111
>gi|14591528|ref|NP_143610.1| 30S ribosomal protein S3 [Pyrococcus horikoshii OT3]
gi|6647791|sp|O59424.1|RS3_PYRHO RecName: Full=30S ribosomal protein S3
gi|3258205|dbj|BAA30888.1| 210aa long hypothetical 30S ribosomal protein S3 [Pyrococcus
horikoshii OT3]
Length = 210
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 67/127 (52%), Gaps = 2/127 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILS 127
ELT +++++F +++ +++ N L A QA + L G+ RR + +
Sbjct: 64 ELTRILERQFGLENPQIDV--QEIKNPYLNAKVQAVRIAQALERGIHFRRAAYSAMRAIM 121
Query: 128 NKALRSC 134
N R
Sbjct: 122 NNGARGV 128
>gi|336477155|ref|YP_004616296.1| 30S ribosomal protein S3 [Methanosalsum zhilinae DSM 4017]
gi|335930536|gb|AEH61077.1| ribosomal protein S3 [Methanosalsum zhilinae DSM 4017]
Length = 311
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A +NE ++L+ GY G+++ TP+ T+I I A + V+G+ G+ IR
Sbjct: 4 EKKFVQDGYVKASMNEYFAKQLSRAGYGGMDLNRTPMGTQITIYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+LT V + + ++ ++ A++V N L A A L + G R+
Sbjct: 64 KLTREVDRMYNL--DNPQIDAQEVKNPALNAQIMASRLASSIERGWYFRK 111
>gi|409731018|ref|ZP_11272568.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
gi|448724776|ref|ZP_21707281.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
gi|445784985|gb|EMA35781.1| 30S ribosomal protein S3P [Halococcus hamelinensis 100A6]
Length = 366
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G+E+ TP+ T+I++RA + V+G+ G+
Sbjct: 1 MATEQQFIEDGMQRTQIDEFFAEELGRAGYGGMELAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+
Sbjct: 61 NIRKVTTELEERFDLDDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRK 111
>gi|322372162|ref|ZP_08046703.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253]
gi|320548171|gb|EFW89844.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253]
Length = 320
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T + +RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKITRELGERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIMDSGAL 126
>gi|448578195|ref|ZP_21643630.1| 30S ribosomal protein S3P [Haloferax larsenii JCM 13917]
gi|445726736|gb|ELZ78352.1| 30S ribosomal protein S3P [Haloferax larsenii JCM 13917]
Length = 298
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQKSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448592785|ref|ZP_21651832.1| 30S ribosomal protein S3P [Haloferax elongans ATCC BAA-1513]
gi|445730811|gb|ELZ82398.1| 30S ribosomal protein S3P [Haloferax elongans ATCC BAA-1513]
Length = 300
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIEDGLQKSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|332158018|ref|YP_004423297.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2]
gi|331033481|gb|AEC51293.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2]
Length = 210
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQA 102
ELT +++K+F +++ +++ N L A QA
Sbjct: 64 ELTRILEKQFGLENPQIDV--QEIKNPYLNAKVQA 96
>gi|261402351|ref|YP_003246575.1| 30S ribosomal protein S3 [Methanocaldococcus vulcanius M7]
gi|261369344|gb|ACX72093.1| ribosomal protein S3 [Methanocaldococcus vulcanius M7]
Length = 206
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 18/146 (12%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + + ++E +EL+ GYS +R TP+ T+III A + V+G +G RIR
Sbjct: 3 ERTFVKEHIKEFLIDEYFKKELSRAGYSHCYIRKTPIGTKIIIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCA--IAQ--AESL----RYKLLGGLAVRR-- 117
ELT + K F + +++ + V N L A +AQ A+SL ++ +G AVRR
Sbjct: 63 ELTETLAKEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGMHFRRVGHTAVRRVM 120
Query: 118 ------YILIISQILSNKALRSCGLM 137
I+IIS L+ + R+ M
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFM 146
>gi|333910788|ref|YP_004484521.1| 30S ribosomal protein S3 [Methanotorris igneus Kol 5]
gi|333751377|gb|AEF96456.1| ribosomal protein S3 [Methanotorris igneus Kol 5]
Length = 209
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 76/144 (52%), Gaps = 14/144 (9%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + + ++E + LA+ GYS +E+R TP+ T+I I A + V+G KG+R++
Sbjct: 3 ERVFVEESIKEMLIDEYFKKTLAKAGYSHMEIRKTPIGTKITIYAEKPGFVIGRKGKRVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQ--AESL----RYKLLGGLAVRR---- 117
ELT ++K +K + +E+ + N +AQ A SL ++ + AVRR
Sbjct: 63 ELTETLEKTYKVNKPQIEVKPIEDPNLDPEVVAQKIATSLERGMHFRRVAHAAVRRVMNA 122
Query: 118 ----YILIISQILSNKALRSCGLM 137
++IIS L+ + R+ M
Sbjct: 123 GAKGVVVIISGKLTGERARTEKFM 146
>gi|255710087|gb|ACU30863.1| 40S ribosomal protein S3 [Ochlerotatus triseriatus]
Length = 157
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 33/47 (70%)
Query: 88 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
AEKV RGLCAIAQAESLRYKL+GGLAVRR + + + + C
Sbjct: 1 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGC 47
>gi|374635645|ref|ZP_09707239.1| ribosomal protein S3 [Methanotorris formicicus Mc-S-70]
gi|373561498|gb|EHP87731.1| ribosomal protein S3 [Methanotorris formicicus Mc-S-70]
Length = 208
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 14/144 (9%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV D + ++E + LA+ GYS +E+R TP+ T+I I A + V+G +G+R++
Sbjct: 3 ERIFVDDNIKEMLIDEYFKKALAKAGYSHMEIRKTPIGTKITIYAEKPGFVIGRRGKRVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQ--AESL----RYKLLGGLAVRR---- 117
ELT ++ +K + +E+ + N +AQ A SL ++ + AVRR
Sbjct: 63 ELTETLENTYKVDKPQIEVKSIDDPNLDPEVVAQKIASSLERGMHFRRVAHAAVRRVMNA 122
Query: 118 ----YILIISQILSNKALRSCGLM 137
++IIS L+ + R+ M
Sbjct: 123 GAKGVVVIISGKLTGERARTEKFM 146
>gi|375083288|ref|ZP_09730314.1| 30S ribosomal protein S3P [Thermococcus litoralis DSM 5473]
gi|374742019|gb|EHR78431.1| 30S ribosomal protein S3P [Thermococcus litoralis DSM 5473]
Length = 207
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + + ++E L +EL GY G++++ TP+ T+++I A R V+G GR+IR
Sbjct: 4 ERYFIKESIKEMLIDEYLEKELRRAGYGGLDIKKTPLGTKVVIFAERPGFVIGRGGRKIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL 105
ELT +++++F +E+ E++ N A QA L
Sbjct: 64 ELTRILERQFGLENPQIEV--EEIKNPYFNAKVQATRL 99
>gi|147795005|emb|CAN71930.1| hypothetical protein VITISV_040426 [Vitis vinifera]
Length = 414
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/47 (57%), Positives = 37/47 (78%)
Query: 28 ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQ 74
++ EDGYS ++V+VT + EIIIRAT+TQN L E GR++RELT V +
Sbjct: 238 DIPEDGYSDIKVKVTGMCMEIIIRATQTQNALIENGRKMRELTLVTR 284
>gi|389853111|ref|YP_006355345.1| 30S ribosomal protein S3 [Pyrococcus sp. ST04]
gi|388250417|gb|AFK23270.1| rpsC, small subunit ribosomal protein S3 [Pyrococcus sp. ST04]
Length = 210
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQA 102
+LT +++ +F +E+ E++ N L A QA
Sbjct: 64 QLTRILESQFGLENPQIEV--EEIKNPYLNAKVQA 96
>gi|429190338|ref|YP_007176016.1| ribosomal protein S3, eukaryotic/archaeal type [Natronobacterium
gregoryi SP2]
gi|448326250|ref|ZP_21515617.1| 30S ribosomal protein S3P [Natronobacterium gregoryi SP2]
gi|429134556|gb|AFZ71567.1| ribosomal protein S3, eukaryotic/archaeal type [Natronobacterium
gregoryi SP2]
gi|445612907|gb|ELY66624.1| 30S ribosomal protein S3P [Natronobacterium gregoryi SP2]
Length = 317
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ +++RF + V++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEERFDLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMEAGAL 126
>gi|14520552|ref|NP_126027.1| 30S ribosomal protein S3P [Pyrococcus abyssi GE5]
gi|17367830|sp|Q9V1U1.1|RS3_PYRAB RecName: Full=30S ribosomal protein S3
gi|5457768|emb|CAB49258.1| rps3P SSU ribosomal protein S3P [Pyrococcus abyssi GE5]
gi|380741079|tpe|CCE69713.1| TPA: 30S ribosomal protein S3P [Pyrococcus abyssi GE5]
Length = 210
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +EL GY G++++ TP+ T++II A V+G GRRIR
Sbjct: 4 ERYFIREAVKEMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQA 102
ELT +++++F +++ +++ N L A QA
Sbjct: 64 ELTRILERQFGLENPQIDV--QEIKNPYLNAKVQA 96
>gi|433638927|ref|YP_007284687.1| ribosomal protein S3, eukaryotic/archaeal type [Halovivax ruber
XH-70]
gi|433290731|gb|AGB16554.1| ribosomal protein S3, eukaryotic/archaeal type [Halovivax ruber
XH-70]
Length = 314
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLRRSQIDEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEERFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448350187|ref|ZP_21539006.1| 30S ribosomal protein S3P [Natrialba taiwanensis DSM 12281]
gi|445637694|gb|ELY90842.1| 30S ribosomal protein S3P [Natrialba taiwanensis DSM 12281]
Length = 328
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEERFDLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMEAGAL 126
>gi|395644922|ref|ZP_10432782.1| ribosomal protein S3 [Methanofollis liminatans DSM 4140]
gi|395441662|gb|EJG06419.1| ribosomal protein S3 [Methanofollis liminatans DSM 4140]
Length = 236
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV++GV + E L+REL GY G+++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVSEGVTRVRVEEYLSRELKRAGYGGMDIVRTPMGTQVTIFAEKPGIVIGKGGKLVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+LT + F VE+ ++V N + A AE L L G R+
Sbjct: 64 QLTQDLSTNFNLESPQVEV--QQVANPSVNAQIMAERLATALERGWYFRK 111
>gi|448323157|ref|ZP_21512621.1| 30S ribosomal protein S3P [Natronococcus amylolyticus DSM 10524]
gi|445600343|gb|ELY54356.1| 30S ribosomal protein S3P [Natronococcus amylolyticus DSM 10524]
Length = 313
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFEEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIMDSGAL 126
>gi|336252434|ref|YP_004595541.1| 30S ribosomal protein S3 [Halopiger xanaduensis SH-6]
gi|335336423|gb|AEH35662.1| ribosomal protein S3 [Halopiger xanaduensis SH-6]
Length = 320
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G+EV TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++++F + V++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEEKFNLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMEAGAL 126
>gi|448730383|ref|ZP_21712691.1| 30S ribosomal protein S3P [Halococcus saccharolyticus DSM 5350]
gi|445793551|gb|EMA44123.1| 30S ribosomal protein S3P [Halococcus saccharolyticus DSM 5350]
Length = 372
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+ ++ F+ DG+ +++E EL GY G+E+ TP+ T+I++RA + V+G+ G+
Sbjct: 1 MGSEQTFIEDGMQRTQIDEFFGDELERAGYGGMELAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+
Sbjct: 61 NIRKITTQLEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRK 111
>gi|448362298|ref|ZP_21550909.1| 30S ribosomal protein S3P [Natrialba asiatica DSM 12278]
gi|445648819|gb|ELZ01767.1| 30S ribosomal protein S3P [Natrialba asiatica DSM 12278]
Length = 326
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEERFDLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMEAGAL 126
>gi|257387882|ref|YP_003177655.1| 30S ribosomal protein S3 [Halomicrobium mukohataei DSM 12286]
gi|257170189|gb|ACV47948.1| ribosomal protein S3 [Halomicrobium mukohataei DSM 12286]
Length = 317
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
IR++T+ +++ F + V++ ++V+ L A A+ L L G R+
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV--QEVDEPDLNARIVADRLGNALERGWYFRK 111
>gi|313125796|ref|YP_004036066.1| 30S ribosomal protein S3 [Halogeometricum borinquense DSM 11551]
gi|448285635|ref|ZP_21476876.1| 30S ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
gi|312292161|gb|ADQ66621.1| SSU ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
gi|445576271|gb|ELY30728.1| 30S ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
Length = 310
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T ++ RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTKALETRFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448369933|ref|ZP_21556386.1| 30S ribosomal protein S3P [Natrialba aegyptia DSM 13077]
gi|445650373|gb|ELZ03297.1| 30S ribosomal protein S3P [Natrialba aegyptia DSM 13077]
Length = 328
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEERFDLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMEAGAL 126
>gi|397780850|ref|YP_006545323.1| 30S ribosomal protein S3P [Methanoculleus bourgensis MS2]
gi|396939352|emb|CCJ36607.1| 30S ribosomal protein S3P [Methanoculleus bourgensis MS2]
Length = 234
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KF+++GV + + LT+EL GY G+++ TP+ T+I I A + V+G+ G+++R
Sbjct: 4 EKKFISEGVRNVRVEKFLTKELKRAGYGGMDITRTPLGTQITIFAEKPGIVIGKGGKQVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+LT + F VE+ ++V N A AE L L G R+
Sbjct: 64 QLTQDLATHFGIESPQVEV--QQVQNPNFSAQIMAERLANALERGWYFRK 111
>gi|256810641|ref|YP_003128010.1| 30S ribosomal protein S3 [Methanocaldococcus fervens AG86]
gi|256793841|gb|ACV24510.1| ribosomal protein S3 [Methanocaldococcus fervens AG86]
Length = 207
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 74/146 (50%), Gaps = 18/146 (12%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + ++E +EL+ GYS ++R TP+ T+I I A + V+G +G RIR
Sbjct: 3 ERTFVKENTTKLLIDEYFKKELSRAGYSHCDIRKTPIGTKITIYAEKPGFVIGRRGSRIR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCA------IAQA--ESLRYKLLGGLAVRR-- 117
ELT + + F + +++ + V N L A +AQ+ L ++ +G AVRR
Sbjct: 63 ELTKTLAEEFGVEKPQIDV--KPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVM 120
Query: 118 ------YILIISQILSNKALRSCGLM 137
I+IIS L+ + R+ M
Sbjct: 121 NAGAKGVIVIISGKLTGERARTEKFM 146
>gi|253746539|gb|EET01746.1| Ribosomal protein S3 [Giardia intestinalis ATCC 50581]
Length = 217
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
K++ D + AEL+E +REL + GY+ + T +II+ + V+G+ R+ ++
Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTADSICVIIQCAEPEIVMGDNHYRLHKI 75
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
++ RF + ++ +K+ RGL A ++LR KL + +RR
Sbjct: 76 EYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRR 123
>gi|330508492|ref|YP_004384920.1| 30S ribosomal protein S3P [Methanosaeta concilii GP6]
gi|328929300|gb|AEB69102.1| ribosomal protein S3P [Methanosaeta concilii GP6]
Length = 278
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 51/82 (62%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S ++KFVA+G+ A +NE L EL GY G+++ TP+ T+I + A + V+G+ G+
Sbjct: 1 MSVEKKFVAEGITKALVNEYLADELERAGYGGMQMNRTPMGTQITVYAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T + +RF +++
Sbjct: 61 LIRKITRDLDRRFHLDNPQIDV 82
>gi|124484916|ref|YP_001029532.1| 30S ribosomal protein S3P [Methanocorpusculum labreanum Z]
gi|152060873|sp|A2SPK9.1|RS3_METLZ RecName: Full=30S ribosomal protein S3
gi|124362457|gb|ABN06265.1| SSU ribosomal protein S3P [Methanocorpusculum labreanum Z]
Length = 231
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 3/125 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFVADGV + + L +EL GY G+++ TPV T++ I A + V+G+ G+ +R
Sbjct: 4 EKKFVADGVRKVRVEQYLNKELKRAGYGGMDIVRTPVGTQVTIFAEKPGIVIGKGGKLVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIISQIL 126
+LT+ + + VE+ ++V N L A AE L L G R+ +I +++
Sbjct: 64 QLTTDLSTVYGIESPQVEV--QQVANPNLNAQIMAERLANALERGWYFRKAGTSVIRRVM 121
Query: 127 SNKAL 131
+ AL
Sbjct: 122 DSGAL 126
>gi|300710381|ref|YP_003736195.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|448294705|ref|ZP_21484784.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|299124064|gb|ADJ14403.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|445586382|gb|ELY40664.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
Length = 302
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G+EV TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGMQRSQIDEFFATELERAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTRQLEERFDLEDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448704122|ref|ZP_21700603.1| 30S ribosomal protein S3P [Halobiforma nitratireducens JCM 10879]
gi|445796511|gb|EMA47015.1| 30S ribosomal protein S3P [Halobiforma nitratireducens JCM 10879]
Length = 320
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 54/82 (65%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ +++RF + V++
Sbjct: 61 NIRKVTTALEERFDLEDPQVDV 82
>gi|435848742|ref|YP_007310992.1| SSU ribosomal protein S3P [Natronococcus occultus SP4]
gi|433675010|gb|AGB39202.1| SSU ribosomal protein S3P [Natronococcus occultus SP4]
Length = 326
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFEEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIMESGAL 126
>gi|448611741|ref|ZP_21662171.1| 30S ribosomal protein S3P [Haloferax mucosum ATCC BAA-1512]
gi|445742502|gb|ELZ93996.1| 30S ribosomal protein S3P [Haloferax mucosum ATCC BAA-1512]
Length = 299
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448569076|ref|ZP_21638488.1| 30S ribosomal protein S3P [Haloferax lucentense DSM 14919]
gi|448600505|ref|ZP_21656001.1| 30S ribosomal protein S3P [Haloferax alexandrinus JCM 10717]
gi|445725226|gb|ELZ76851.1| 30S ribosomal protein S3P [Haloferax lucentense DSM 14919]
gi|445735222|gb|ELZ86774.1| 30S ribosomal protein S3P [Haloferax alexandrinus JCM 10717]
Length = 303
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448545980|ref|ZP_21626307.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-646]
gi|448548054|ref|ZP_21627398.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-645]
gi|448557077|ref|ZP_21632512.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-644]
gi|445703326|gb|ELZ55257.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-646]
gi|445714756|gb|ELZ66514.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-645]
gi|445714946|gb|ELZ66703.1| 30S ribosomal protein S3P [Haloferax sp. ATCC BAA-644]
Length = 302
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|292656679|ref|YP_003536576.1| 30S ribosomal protein S3 [Haloferax volcanii DS2]
gi|448290683|ref|ZP_21481829.1| 30S ribosomal protein S3P [Haloferax volcanii DS2]
gi|291370935|gb|ADE03162.1| ribosomal protein S3 [Haloferax volcanii DS2]
gi|445578054|gb|ELY32469.1| 30S ribosomal protein S3P [Haloferax volcanii DS2]
Length = 304
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448377812|ref|ZP_21560508.1| 30S ribosomal protein S3P [Halovivax asiaticus JCM 14624]
gi|445655756|gb|ELZ08601.1| 30S ribosomal protein S3P [Halovivax asiaticus JCM 14624]
Length = 314
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLRRSQIDEFFADELGRAGYGGMDVAQTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++ RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448606201|ref|ZP_21658780.1| 30S ribosomal protein S3P [Haloferax sulfurifontis ATCC BAA-897]
gi|445739618|gb|ELZ91125.1| 30S ribosomal protein S3P [Haloferax sulfurifontis ATCC BAA-897]
Length = 302
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448623086|ref|ZP_21669735.1| 30S ribosomal protein S3P [Haloferax denitrificans ATCC 35960]
gi|445753594|gb|EMA05011.1| 30S ribosomal protein S3P [Haloferax denitrificans ATCC 35960]
Length = 303
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|433420031|ref|ZP_20405417.1| 30S ribosomal protein S3P [Haloferax sp. BAB2207]
gi|432199288|gb|ELK55479.1| 30S ribosomal protein S3P [Haloferax sp. BAB2207]
Length = 303
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|255513430|gb|EET89696.1| ribosomal protein S3- domain protein [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 207
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 67/125 (53%), Gaps = 3/125 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R+F+ D + +++ L EL++ G+S VE++ TP+ T I + V+G G+ I
Sbjct: 4 ERRFIDDAIIKLNISKFLGTELSKAGFSRVEIQKTPIITRITVYVLNPGRVIGRGGKAID 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI-LIISQIL 126
+LT ++ RF N+ + +V N+ + + A+ + +KL G+ R+ I + I+
Sbjct: 64 DLTETIKSRFNV--NNPRISVVEVQNKMIEPLLVAKDIAFKLERGINPRKIIQFTLKSIM 121
Query: 127 SNKAL 131
N AL
Sbjct: 122 ENGAL 126
>gi|448399316|ref|ZP_21570618.1| 30S ribosomal protein S3P [Haloterrigena limicola JCM 13563]
gi|445669223|gb|ELZ21836.1| 30S ribosomal protein S3P [Haloterrigena limicola JCM 13563]
Length = 310
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 53/82 (64%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ +++RF + +++
Sbjct: 61 NIRKVTTALEERFNLEDPQIDV 82
>gi|432332005|ref|YP_007250148.1| ribosomal protein S3, eukaryotic/archaeal type [Methanoregula
formicicum SMSP]
gi|432138714|gb|AGB03641.1| ribosomal protein S3, eukaryotic/archaeal type [Methanoregula
formicicum SMSP]
Length = 231
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 69/125 (55%), Gaps = 3/125 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+A+GV A + + L++EL GY G+++ TP+ T++ I A + V+G+ G+ +
Sbjct: 4 ERKFIAEGVRKARVEKYLSKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKLVH 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIISQIL 126
+LT + + + +E+ ++VNN A AE L L G R+ I+ +++
Sbjct: 64 QLTQDLAQNYGVESPQIEV--QQVNNPSFNAQIMAERLANALERGWYFRKAGTSILRRVM 121
Query: 127 SNKAL 131
+ AL
Sbjct: 122 DSGAL 126
>gi|448583476|ref|ZP_21646832.1| 30S ribosomal protein S3P [Haloferax gibbonsii ATCC 33959]
gi|445729705|gb|ELZ81300.1| 30S ribosomal protein S3P [Haloferax gibbonsii ATCC 33959]
Length = 302
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448565521|ref|ZP_21636388.1| 30S ribosomal protein S3P [Haloferax prahovense DSM 18310]
gi|445715265|gb|ELZ67021.1| 30S ribosomal protein S3P [Haloferax prahovense DSM 18310]
Length = 303
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|389848011|ref|YP_006350250.1| 30S ribosomal protein S3 [Haloferax mediterranei ATCC 33500]
gi|448618108|ref|ZP_21666453.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
gi|388245317|gb|AFK20263.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
gi|445747663|gb|ELZ99118.1| 30S ribosomal protein S3P [Haloferax mediterranei ATCC 33500]
Length = 300
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T +++RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTRELEERFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|327243123|gb|AEA41162.1| ribosomal protein S3 [Metacarcinus magister]
Length = 31
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/31 (87%), Positives = 28/31 (90%)
Query: 33 GYSGVEVRVTPVRTEIIIRATRTQNVLGEKG 63
GYSGV+VR TP RTEIII ATRTQNVLGEKG
Sbjct: 1 GYSGVQVRHTPARTEIIILATRTQNVLGEKG 31
>gi|383625039|ref|ZP_09949445.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
gi|448697495|ref|ZP_21698535.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
gi|445781448|gb|EMA32304.1| 30S ribosomal protein S3P [Halobiforma lacisalsi AJ5]
Length = 318
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++++F + V++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEEKFDLEDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMEAGAL 126
>gi|159117007|ref|XP_001708724.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803]
gi|157436837|gb|EDO81050.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803]
gi|308158393|gb|EFO61089.1| Ribosomal protein S3 [Giardia lamblia P15]
Length = 217
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 57/108 (52%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
K++ D + AEL+E +REL + GY+ + T +II+ + V+G+ R+ ++
Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLHKI 75
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
++ RF + ++ +K+ RGL A ++LR KL + +RR
Sbjct: 76 EYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRR 123
>gi|448298471|ref|ZP_21488500.1| 30S ribosomal protein S3P [Natronorubrum tibetense GA33]
gi|445591667|gb|ELY45868.1| 30S ribosomal protein S3P [Natronorubrum tibetense GA33]
Length = 323
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|448386095|ref|ZP_21564303.1| 30S ribosomal protein S3P [Haloterrigena thermotolerans DSM
11522]
gi|445655993|gb|ELZ08835.1| 30S ribosomal protein S3P [Haloterrigena thermotolerans DSM
11522]
Length = 312
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 53/82 (64%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ +++RF + +++
Sbjct: 61 NIRKVTTTLEERFNLEDPQIDV 82
>gi|433590200|ref|YP_007279696.1| ribosomal protein S3, eukaryotic/archaeal type [Natrinema
pellirubrum DSM 15624]
gi|448332394|ref|ZP_21521638.1| 30S ribosomal protein S3P [Natrinema pellirubrum DSM 15624]
gi|433304980|gb|AGB30792.1| ribosomal protein S3, eukaryotic/archaeal type [Natrinema
pellirubrum DSM 15624]
gi|445627498|gb|ELY80822.1| 30S ribosomal protein S3P [Natrinema pellirubrum DSM 15624]
Length = 316
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 53/82 (64%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ +++RF + +++
Sbjct: 61 NIRKVTTTLEERFNLEDPQIDV 82
>gi|257053365|ref|YP_003131198.1| 30S ribosomal protein S3P [Halorhabdus utahensis DSM 12940]
gi|256692128|gb|ACV12465.1| ribosomal protein S3 [Halorhabdus utahensis DSM 12940]
Length = 326
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 52/82 (63%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADELQFIQDGIQRTQIDEFFEDELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ +++ F + V++
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV 82
>gi|448315118|ref|ZP_21504771.1| 30S ribosomal protein S3P [Natronococcus jeotgali DSM 18795]
gi|445612377|gb|ELY66103.1| 30S ribosomal protein S3P [Natronococcus jeotgali DSM 18795]
Length = 295
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFEEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++++F + +++ ++V L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVEEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIMDSGAL 126
>gi|298674796|ref|YP_003726546.1| 30S ribosomal protein S3 [Methanohalobium evestigatum Z-7303]
gi|298287784|gb|ADI73750.1| ribosomal protein S3 [Methanohalobium evestigatum Z-7303]
Length = 307
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+ KFV DG A L+E ++L GY G+E+ TP+ T+I I A + V+G+ G+ IR
Sbjct: 4 ENKFVTDGYVKASLDEYFAKQLNRAGYGGMEINRTPMGTQITIYAEKPGMVIGKGGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+LT V K + ++ ++ A++V L A A L + G R+
Sbjct: 64 KLTRDVDKLYNM--DNPQIDAQEVKTPELNAQMMATRLAASIERGWYFRK 111
>gi|448352603|ref|ZP_21541385.1| 30S ribosomal protein S3P [Natrialba hulunbeirensis JCM 10989]
gi|445642165|gb|ELY95235.1| 30S ribosomal protein S3P [Natrialba hulunbeirensis JCM 10989]
Length = 330
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 73/128 (57%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ +++F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEQQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMEAGAL 126
>gi|448329365|ref|ZP_21518665.1| 30S ribosomal protein S3P [Natrinema versiforme JCM 10478]
gi|445614104|gb|ELY67785.1| 30S ribosomal protein S3P [Natrinema versiforme JCM 10478]
Length = 322
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 53/82 (64%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ +++RF + +++
Sbjct: 61 NIRKVTTALEERFNLEDPQIDV 82
>gi|448358810|ref|ZP_21547484.1| 30S ribosomal protein S3P [Natrialba chahannaoensis JCM 10990]
gi|445644490|gb|ELY97503.1| 30S ribosomal protein S3P [Natrialba chahannaoensis JCM 10990]
Length = 329
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMEAGAL 126
>gi|448338128|ref|ZP_21527180.1| 30S ribosomal protein S3P [Natrinema pallidum DSM 3751]
gi|445623303|gb|ELY76725.1| 30S ribosomal protein S3P [Natrinema pallidum DSM 3751]
Length = 314
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 52/82 (63%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ ++ RF + +++
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV 82
>gi|289579904|ref|YP_003478370.1| 30S ribosomal protein S3 [Natrialba magadii ATCC 43099]
gi|448281144|ref|ZP_21472452.1| 30S ribosomal protein S3P [Natrialba magadii ATCC 43099]
gi|289529457|gb|ADD03808.1| ribosomal protein S3 [Natrialba magadii ATCC 43099]
gi|445579468|gb|ELY33862.1| 30S ribosomal protein S3P [Natrialba magadii ATCC 43099]
Length = 335
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMEAGAL 126
>gi|448345591|ref|ZP_21534480.1| 30S ribosomal protein S3P [Natrinema altunense JCM 12890]
gi|445633524|gb|ELY86711.1| 30S ribosomal protein S3P [Natrinema altunense JCM 12890]
Length = 312
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 52/82 (63%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ ++ RF + +++
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV 82
>gi|397773837|ref|YP_006541383.1| ribosomal protein S3 [Natrinema sp. J7-2]
gi|448341384|ref|ZP_21530345.1| 30S ribosomal protein S3P [Natrinema gari JCM 14663]
gi|397682930|gb|AFO57307.1| ribosomal protein S3 [Natrinema sp. J7-2]
gi|445628066|gb|ELY81377.1| 30S ribosomal protein S3P [Natrinema gari JCM 14663]
Length = 312
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 52/82 (63%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ ++ RF + +++
Sbjct: 61 NIRKVTTALEDRFNLEDPQIDV 82
>gi|448735129|ref|ZP_21717346.1| 30S ribosomal protein S3P [Halococcus salifodinae DSM 8989]
gi|445798742|gb|EMA49133.1| 30S ribosomal protein S3P [Halococcus salifodinae DSM 8989]
Length = 372
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+ ++ F+ DG+ +++E EL GY G+++ TP+ T+I++RA + V+G+ G+
Sbjct: 1 MGSEQTFIEDGMQRTQIDEFFGDELERAGYGGMDLAKTPMGTQIVLRAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+
Sbjct: 61 NIRKITTQLEERFDLDDPQIDV--QEVDEPDLNAQIVADRLGNALERGWYFRK 111
>gi|170060068|ref|XP_001865639.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167878646|gb|EDS42029.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 179
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 35/63 (55%)
Query: 17 FFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKR 76
FF + LAEDG SGVEVRVTP RTE II A+ + RIREL +V+
Sbjct: 20 FFLRSGSSFSAWLAEDGLSGVEVRVTPTRTEFIIMASAPRTCSARSDHRIRELNAVIYGV 79
Query: 77 FKF 79
+F
Sbjct: 80 LRF 82
>gi|448415413|ref|ZP_21578213.1| 30S ribosomal protein S3P [Halosarcina pallida JCM 14848]
gi|445681071|gb|ELZ33512.1| 30S ribosomal protein S3P [Halosarcina pallida JCM 14848]
Length = 343
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T ++ RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTKELENRFDLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMDAGAL 126
>gi|126178520|ref|YP_001046485.1| 30S ribosomal protein S3P [Methanoculleus marisnigri JR1]
gi|152060874|sp|A3CT03.1|RS3_METMJ RecName: Full=30S ribosomal protein S3
gi|125861314|gb|ABN56503.1| SSU ribosomal protein S3P [Methanoculleus marisnigri JR1]
Length = 234
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KF+ DGV + + LT+EL GY G+++ TP+ T++ I A + V+G+ G+++R
Sbjct: 4 EKKFITDGVRNVRVEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+LT + + VE+ ++V N A AE L L G R+
Sbjct: 64 QLTQDLATDYDIESPQVEV--QQVQNPNFNAQIMAERLANALERGWYFRK 111
>gi|284165498|ref|YP_003403777.1| 30S ribosomal protein S3 [Haloterrigena turkmenica DSM 5511]
gi|284015153|gb|ADB61104.1| ribosomal protein S3 [Haloterrigena turkmenica DSM 5511]
Length = 317
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMEAGAL 126
>gi|73667656|ref|YP_303671.1| 30S ribosomal protein S3 [Methanosarcina barkeri str. Fusaro]
gi|91207819|sp|Q46GA1.1|RS3_METBF RecName: Full=30S ribosomal protein S3
gi|72394818|gb|AAZ69091.1| SSU ribosomal protein S3P [Methanosarcina barkeri str. Fusaro]
Length = 311
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV DG A ++E +L GY G+E+ TP+ T+I+I + + V+G+ G+ IR
Sbjct: 4 ERKFVNDGFVKASMDEYFAEQLNRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+LT V R+ EN ++ A++V L A A L + G R+
Sbjct: 64 KLTRDVAARYNL-ENP-QIDAQEVKKPELNAQMMASRLAASIERGWYFRK 111
>gi|432328995|ref|YP_007247139.1| ribosomal protein S3, eukaryotic/archaeal type [Aciduliprofundum
sp. MAR08-339]
gi|432135704|gb|AGB04973.1| ribosomal protein S3, eukaryotic/archaeal type [Aciduliprofundum
sp. MAR08-339]
Length = 239
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV + V + E L +E A G+ G+E++ TP+ T I++ R V+G KG +I+
Sbjct: 3 ERKFVKESVNRLLMKEYLMKETAMAGFGGLEIQRTPLGTRIVLEVERPGMVIGRKGAKIK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
ELT +Q+ F ++E+ ++ +N L A A+ L L G RR
Sbjct: 63 ELTDRLQQDFGVENPTIEV--KESDNPYLNAQIMAQKLAMALERGWHFRR 110
>gi|354610531|ref|ZP_09028487.1| ribosomal protein S3 [Halobacterium sp. DL1]
gi|353195351|gb|EHB60853.1| ribosomal protein S3 [Halobacterium sp. DL1]
Length = 323
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ G+ ++++E ELA GY G+E+ TP+ +I+++A + V+G+ G+
Sbjct: 1 MADEMQFIEQGLQRSQIDEFFATELARAGYGGMELAPTPMGMQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
IR++T+ +++RF + +++ ++V+ L A A+ L L G R+
Sbjct: 61 NIRKITTQLEERFDLEDPQIDV--QEVDEPDLNAQIVADRLANALERGWYFRK 111
>gi|335437506|ref|ZP_08560282.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|335438903|ref|ZP_08561634.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|334890174|gb|EGM28448.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
gi|334895854|gb|EGM34017.1| 30S ribosomal protein S3P [Halorhabdus tiamatea SARL4B]
Length = 326
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 51/82 (62%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ DG+ +++E EL GY G+EV TP+ T+I++ A + V+G+ G+
Sbjct: 1 MADELQFIEDGLQRTQIDEFFEDELGRAGYGGMEVAKTPMGTQIVLEAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ +++ F + V++
Sbjct: 61 NIRKITTTLEEEFGLEDPQVDV 82
>gi|448311974|ref|ZP_21501727.1| 30S ribosomal protein S3P [Natronolimnobius innermongolicus JCM
12255]
gi|445603595|gb|ELY57557.1| 30S ribosomal protein S3P [Natronolimnobius innermongolicus JCM
12255]
Length = 315
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ ++++F + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTTALEEQFNLEDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ AL
Sbjct: 119 RIMEAGAL 126
>gi|289597187|ref|YP_003483883.1| 30S ribosomal protein S3 [Aciduliprofundum boonei T469]
gi|289534974|gb|ADD09321.1| ribosomal protein S3 [Aciduliprofundum boonei T469]
Length = 237
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV + V + E L +E A G+ G+E++ TP+ T II+ R V+G KG +I+
Sbjct: 3 ERKFVKENVNRLLMKEYLMKETAMAGFGGLEIQRTPLGTRIILEVERPGMVIGRKGAKIK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
ELT +Q+ F ++E+ ++ N L A A+ L L G RR
Sbjct: 63 ELTDKLQQDFGVENPTIEV--KESPNPYLNAQIMAQKLAMALERGWHFRR 110
>gi|448309700|ref|ZP_21499556.1| 30S ribosomal protein S3P [Natronorubrum bangense JCM 10635]
gi|445589557|gb|ELY43787.1| 30S ribosomal protein S3P [Natronorubrum bangense JCM 10635]
Length = 308
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 53/82 (64%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ ++++F + +++
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV 82
>gi|288560114|ref|YP_003423600.1| 30S ribosomal protein S3 [Methanobrevibacter ruminantium M1]
gi|288542824|gb|ADC46708.1| ribosomal protein S3P Rps3p [Methanobrevibacter ruminantium M1]
Length = 251
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G+E++VTP+ T +I+ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLRRTRIDEYLEKELERAGYGGMEIQVTPLGTMVIVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVEL 86
+T ++ +F VE+
Sbjct: 63 AITQSLKTKFDLDNPQVEV 81
>gi|110668735|ref|YP_658546.1| 30S ribosomal protein S3P [Haloquadratum walsbyi DSM 16790]
gi|385804235|ref|YP_005840635.1| 30S ribosomal protein S3 [Haloquadratum walsbyi C23]
gi|121689634|sp|Q18GF5.1|RS3_HALWD RecName: Full=30S ribosomal protein S3
gi|109626482|emb|CAJ52943.1| 30S ribosomal protein S3 [Haloquadratum walsbyi DSM 16790]
gi|339729727|emb|CCC41005.1| 30S ribosomal protein S3 [Haloquadratum walsbyi C23]
Length = 323
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G+
Sbjct: 1 MADEHQFIENGLQRSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T ++ RF + +++ ++V+ L A A+ L L G R+ I
Sbjct: 61 NIRKVTRELEDRFNLDDPQIDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIIESGAL 126
>gi|448302872|ref|ZP_21492822.1| 30S ribosomal protein S3P [Natronorubrum sulfidifaciens JCM
14089]
gi|445593879|gb|ELY48046.1| 30S ribosomal protein S3P [Natronorubrum sulfidifaciens JCM
14089]
Length = 313
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 52/82 (63%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ ++ +F + +++
Sbjct: 61 NIRKVTTALEDKFNLEDPQIDV 82
>gi|15790638|ref|NP_280462.1| 30S ribosomal protein S3 [Halobacterium sp. NRC-1]
gi|169236377|ref|YP_001689577.1| 30S ribosomal protein S3P [Halobacterium salinarum R1]
gi|21264507|sp|P15009.3|RS3_HALSA RecName: Full=30S ribosomal protein S3; AltName: Full=HHAS3;
AltName: Full=HS4
gi|2425182|dbj|BAA22276.1| ribosomal protein S3 [Halobacterium salinarum]
gi|10581165|gb|AAG19942.1| 30S ribosomal protein S3P [Halobacterium sp. NRC-1]
gi|167727443|emb|CAP14231.1| 30S ribosomal protein S3 [Halobacterium salinarum R1]
Length = 302
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ G+ ++++E ELA GY G+E+ TP+ +I+++A + V+G+ G+
Sbjct: 1 MADELEFIEQGLQRSQIDEFFAEELARAGYGGMELAPTPMGMQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIIS 123
IR++T+ +++RF + +++ ++V L A A+ L L G R+ I
Sbjct: 61 NIRKITTQLEERFDLEDPQIDV--QEVEEPDLNAQIVADRLANALERGWYFRKAGHTTID 118
Query: 124 QILSNKAL 131
+I+ + AL
Sbjct: 119 RIMESGAL 126
>gi|448392355|ref|ZP_21567129.1| 30S ribosomal protein S3P [Haloterrigena salina JCM 13891]
gi|445664445|gb|ELZ17154.1| 30S ribosomal protein S3P [Haloterrigena salina JCM 13891]
Length = 318
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 53/82 (64%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ +G+ ++++E EL GY G++V TP+ T+I+++A + V+G+ G
Sbjct: 1 MADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGE 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ ++++F + +++
Sbjct: 61 NIRKVTTALEEKFNLEDPQIDV 82
>gi|408404342|ref|YP_006862325.1| 30S ribosomal protein S3p [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408364938|gb|AFU58668.1| 30S ribosomal protein S3p [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 222
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 3/81 (3%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
ELNE L L + GY GVEV+ TPV I I TR V+G KG I++L + ++++F
Sbjct: 2 ELNEFLADALKDAGYGGVEVQKTPVGARITIYVTRPGLVIGRKGTGIKDLMTKIEQKFGL 61
Query: 80 --PENSV-ELYAEKVNNRGLC 97
P+ SV E+ ++N +C
Sbjct: 62 QNPQISVLEVTNPELNPHIMC 82
>gi|300521570|gb|ADK25996.1| r-protein S3p [Candidatus Nitrososphaera gargensis]
Length = 236
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
ELNE L L + GY GVEV+ TPV I I TR V+G KG I++L + ++++F
Sbjct: 16 ELNEFLADALKDAGYGGVEVQKTPVGARITIYVTRPGLVIGRKGTGIKDLMTKIEQKFGL 75
Query: 80 --PENSV-ELYAEKVNNRGLCA-IAQ 101
P+ SV E+ ++N +C IAQ
Sbjct: 76 QNPQISVLEVTNPELNPHIMCNRIAQ 101
>gi|20089948|ref|NP_616023.1| 30S ribosomal protein S3 [Methanosarcina acetivorans C2A]
gi|27734505|sp|Q8TRU1.1|RS3_METAC RecName: Full=30S ribosomal protein S3
gi|19914909|gb|AAM04503.1| ribosomal protein S3p [Methanosarcina acetivorans C2A]
Length = 318
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L+ GY G+E+ TP+ T+I+I + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVE 85
+LT V ++ ++
Sbjct: 64 KLTRDVANKYSLENPQID 81
>gi|91772089|ref|YP_564781.1| 30S ribosomal protein S3P [Methanococcoides burtonii DSM 6242]
gi|121687004|sp|Q12ZU5.1|RS3_METBU RecName: Full=30S ribosomal protein S3
gi|91711104|gb|ABE51031.1| SSU ribosomal protein S3P [Methanococcoides burtonii DSM 6242]
Length = 304
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E ++L+ GY G+++ TP+ T+I + A + V+G+ G+ IR
Sbjct: 4 EKKFVQDGYVKASMDEYFAKQLSRAGYGGMDINRTPMGTQITVYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+LT V + + ++ ++ A++V L A A L + G R+
Sbjct: 64 KLTRDVDRLYDL--DNPQIDAQEVKRPELNAQMMASRLASSIERGWYFRK 111
>gi|297619583|ref|YP_003707688.1| 30S ribosomal protein S3 [Methanococcus voltae A3]
gi|297378560|gb|ADI36715.1| ribosomal protein S3 [Methanococcus voltae A3]
Length = 218
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V A +NE ++L + GYS ++V+ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVTNNVSEALINEYFCKKLVKAGYSHIDVKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
ELT ++ +K +E+ +++ N L + L G+ R+
Sbjct: 63 ELTETLRTVYKIENPQIEV--KQIENADLDPAVVGHKIAASLEKGMHFRK 110
>gi|452210667|ref|YP_007490781.1| SSU ribosomal protein S3e (S3p) [Methanosarcina mazei Tuc01]
gi|452100569|gb|AGF97509.1| SSU ribosomal protein S3e (S3p) [Methanosarcina mazei Tuc01]
Length = 307
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L GY G+E+ TP+ T+III + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLNRAGYGGMELNRTPMGTQIIIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+LT V ++ EN ++ A++V L A A L + G R+
Sbjct: 64 KLTRDVATKYNL-ENP-QIDAQEVKKPELNAQMMASRLAASIERGWYFRK 111
>gi|21228232|ref|NP_634154.1| 30S ribosomal protein S3 [Methanosarcina mazei Go1]
gi|27734502|sp|Q8PV44.1|RS3_METMA RecName: Full=30S ribosomal protein S3
gi|20906688|gb|AAM31826.1| SSU ribosomal protein S3P [Methanosarcina mazei Go1]
Length = 307
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L GY G+E+ TP+ T+III + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLNRAGYGGMELNRTPMGTQIIIYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+LT V ++ EN ++ A++V L A A L + G R+
Sbjct: 64 KLTRDVATKYNL-ENP-QIDAQEVKKPELNAQMMASRLAASIERGWYFRK 111
>gi|282164896|ref|YP_003357281.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE]
gi|282157210|dbj|BAI62298.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE]
Length = 292
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+KFV DG A ++E +L GY G+++ TP+ T+I IRA + ++G+ G+ IR+
Sbjct: 5 KKFVQDGFKKAMIDEFFLEKLERAGYGGMDINRTPMGTQITIRAEKPGMIIGKSGKMIRK 64
Query: 69 LTSVVQKRFKFPENSVEL 86
T + RFK +++
Sbjct: 65 FTKDLDVRFKMDNPQIDV 82
>gi|383319759|ref|YP_005380600.1| 30S ribosomal protein S3 [Methanocella conradii HZ254]
gi|379321129|gb|AFD00082.1| SSU ribosomal protein S3P [Methanocella conradii HZ254]
Length = 280
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E +L GY G+E+ TP+ T+I I+A + ++G+ G+ IR
Sbjct: 4 EKKFVQDGFKKAMIDEFFLEKLERAGYGGMEINRTPMGTQITIKAEKPGMIIGKSGKMIR 63
Query: 68 ELTSVVQKRFKFPENSVEL 86
+ T + RFK +++
Sbjct: 64 KFTRDLDVRFKMDNPQIDV 82
>gi|294496011|ref|YP_003542504.1| 30S ribosomal protein S3P [Methanohalophilus mahii DSM 5219]
gi|292667010|gb|ADE36859.1| SSU ribosomal protein S3P [Methanohalophilus mahii DSM 5219]
Length = 314
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A L+E +L+ GY G+E+ TP+ T+I++ + + V+G+ G+ IR
Sbjct: 4 EKKFVEDGFVKASLDEYFANQLSRAGYGGMEINRTPMGTQIVVYSEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+LT V + + ++ ++ A++V L A A L + G R+
Sbjct: 64 KLTRDVGRLYNL--DNPQIDAQEVKRPELNAQMMATRLASSIERGWYFRK 111
>gi|148642816|ref|YP_001273329.1| 30S ribosomal protein S3P [Methanobrevibacter smithii ATCC 35061]
gi|222445047|ref|ZP_03607562.1| hypothetical protein METSMIALI_00664 [Methanobrevibacter smithii
DSM 2375]
gi|261350384|ref|ZP_05975801.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374]
gi|172048064|sp|A5UL83.1|RS3_METS3 RecName: Full=30S ribosomal protein S3
gi|148551833|gb|ABQ86961.1| ribosomal protein S3p [Methanobrevibacter smithii ATCC 35061]
gi|222434612|gb|EEE41777.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2375]
gi|288861167|gb|EFC93465.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374]
Length = 250
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 47/79 (59%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G++V++TP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLEKELERAGYGGMDVQITPLGTMVVVYAERPGMVIGRGGKNVR 62
Query: 68 ELTSVVQKRFKFPENSVEL 86
+T+ ++ F +E+
Sbjct: 63 AITNTLKNDFGLDNPQIEV 81
>gi|15678039|ref|NP_275153.1| 30S ribosomal protein S3 [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6094177|sp|O26116.1|RS3_METTH RecName: Full=30S ribosomal protein S3
gi|2621055|gb|AAB84528.1| ribosomal protein S3 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 258
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G++V+VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVEL 86
+T ++ +F VE+
Sbjct: 63 AITQKLKNKFDLENPQVEV 81
>gi|116755010|ref|YP_844128.1| 30S ribosomal protein S3P [Methanosaeta thermophila PT]
gi|121694870|sp|A0B9W4.1|RS3_METTP RecName: Full=30S ribosomal protein S3
gi|116666461|gb|ABK15488.1| SSU ribosomal protein S3P [Methanosaeta thermophila PT]
Length = 276
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A ++E L +EL GY G+ + TP+ T+I + A + V+G+ G+ IR
Sbjct: 4 EKKFVQEGFTKALVDEYLAKELDRAGYGGMVMNRTPMGTQITVYAEKPGMVIGKGGKLIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+LT +++RF+ ++ ++ + V L A A L L G R+
Sbjct: 64 KLTRDLERRFRL--DNPQIDVQDVGKSDLNARVVANRLASSLEHGWYFRK 111
>gi|435852132|ref|YP_007313718.1| ribosomal protein S3, eukaryotic/archaeal type
[Methanomethylovorans hollandica DSM 15978]
gi|433662762|gb|AGB50188.1| ribosomal protein S3, eukaryotic/archaeal type
[Methanomethylovorans hollandica DSM 15978]
Length = 304
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A L+E ++L GY G+EV TP+ T+I + A + V+G+ G+ IR
Sbjct: 4 EKKFVHEGYVKASLDEYFAKQLNRAGYGGMEVNRTPMGTQITVYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+LT + + + ++ ++ A++V L A A L + G R+
Sbjct: 64 KLTRDIDRMYDL--DNPQIDAQEVRRPELNAQMMATRLASSIERGWYFRK 111
>gi|14600662|ref|NP_147181.1| 30S ribosomal protein S3 [Aeropyrum pernix K1]
gi|6685919|sp|Q9YF78.1|RS3_AERPE RecName: Full=30S ribosomal protein S3
gi|5104002|dbj|BAA79318.1| 30S ribosomal protein S3P [Aeropyrum pernix K1]
Length = 246
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M T++ K F+ G+ +++E L + E GYS V+V T + T I I A R ++G
Sbjct: 1 MPTKVVKH--FLNQGLLRTKIDEWLAQNFYEAGYSRVKVVQTSLGTNITIWAERPALIIG 58
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
+G IR L V Q F P + + E+ N L A QA + + G+ RR
Sbjct: 59 RRGATIRRLQEVFQTVFGLPNPRIRV--EQPENPMLDARVQAFRIARSIERGIHFRRVAF 116
Query: 121 -IISQILSNKAL 131
I++I+SN AL
Sbjct: 117 AAINRIMSNGAL 128
>gi|355571377|ref|ZP_09042629.1| ribosomal protein S3 [Methanolinea tarda NOBI-1]
gi|354825765|gb|EHF09987.1| ribosomal protein S3 [Methanolinea tarda NOBI-1]
Length = 239
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 66/125 (52%), Gaps = 3/125 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFVA+G A + + L +EL GY G++++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVAEGARRARVEKHLKKELKRAGYGGMDLQRTPLGTQVTIFAEKPGIVIGKGGKLVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRY-ILIISQIL 126
+LT + F +E+ ++V N A AE L L G R+ II +++
Sbjct: 64 QLTQDLATDFAVESPQIEV--QQVPNPNFNAQIMAERLANALERGWYFRKAGQSIIRRVM 121
Query: 127 SNKAL 131
AL
Sbjct: 122 DAGAL 126
>gi|304314259|ref|YP_003849406.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str.
Marburg]
gi|302587718|gb|ADL58093.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str.
Marburg]
Length = 275
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G++V+VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVEL 86
+T ++ +F VE+
Sbjct: 63 AITQKLKSKFNLENPQVEV 81
>gi|225948|prf||1404256A ribosomal protein HS4
Length = 83
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 52/82 (63%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ + +F+ G+ ++++E ELA GY +E+ TP+ +I+++A + V+G+ G+
Sbjct: 1 MADELEFIEQGLQRSQIDEFFAEELARAGYGSMELAPTPMGMQIVLKAEKPGMVIGKGGK 60
Query: 65 RIRELTSVVQKRFKFPENSVEL 86
IR++T+ +++RF + +++
Sbjct: 61 NIRKITTQLEERFDLEDPQIDV 82
>gi|88603493|ref|YP_503671.1| 30S ribosomal protein S3 [Methanospirillum hungatei JF-1]
gi|121731027|sp|Q2FT39.1|RS3_METHJ RecName: Full=30S ribosomal protein S3
gi|88188955|gb|ABD41952.1| SSU ribosomal protein S3P [Methanospirillum hungatei JF-1]
Length = 237
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFVADGV + L EL GY G+++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVADGVRKVRVERHLGHELKRAGYGGMDLIRTPLGTQVTIFAEKPGIVIGKGGKVVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
LT + + +E+ ++V+N L A AE L L G R+
Sbjct: 64 TLTQDLATTYGVESPQIEV--QQVDNPNLNAQIMAERLASALERGWYFRK 111
>gi|359417826|ref|ZP_09209890.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
gi|358031816|gb|EHK00656.1| 30S ribosomal protein S3P [Candidatus Haloredivivus sp. G17]
Length = 73
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSG-VEVRVTPVRTEIIIRATRTQNVLGEKGRR 65
++++F+ G +LNE L EL GYSG +++ TP T+I++ A R V+G G R
Sbjct: 2 QEKQFIEKGAQKVKLNEFLQDELEGAGYSGNFDLQRTPTSTKIVVEAQRPGLVIGRGGSR 61
Query: 66 IRELTSVVQKR 76
IRELTS +R
Sbjct: 62 IRELTSAPGRR 72
>gi|410722176|ref|ZP_11361485.1| ribosomal protein S3, eukaryotic/archaeal type, partial
[Methanobacterium sp. Maddingley MBC34]
gi|410597412|gb|EKQ52031.1| ribosomal protein S3, eukaryotic/archaeal type, partial
[Methanobacterium sp. Maddingley MBC34]
Length = 274
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLEKELDRAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVEL 86
+T ++ ++ VE+
Sbjct: 63 AITQNLKNNYELENPQVEV 81
>gi|336121751|ref|YP_004576526.1| 30S ribosomal protein S3 [Methanothermococcus okinawensis IH1]
gi|334856272|gb|AEH06748.1| ribosomal protein S3 [Methanothermococcus okinawensis IH1]
Length = 219
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E L +L GYS ++++ TPV T I + A + V+G KGR ++
Sbjct: 3 ERAFVKENVVETLVDEYLKNKLPRAGYSHMDIKKTPVGTRITVFAEKPGFVIGRKGRMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
ELT + ++ +E+ +++ N L A+ + L G+ RR
Sbjct: 63 ELTETIANKYGVENPQIEV--KQIQNPDLDPEVVAQKIASSLERGMHFRR 110
>gi|154150081|ref|YP_001403699.1| 30S ribosomal protein S3 [Methanoregula boonei 6A8]
gi|171769709|sp|A7I5P5.1|RS3_METB6 RecName: Full=30S ribosomal protein S3
gi|153998633|gb|ABS55056.1| ribosomal protein S3 [Methanoregula boonei 6A8]
Length = 231
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+A+G A + + LT+EL G+ G+++ TP+ T++ I A + V+G+ G+ +
Sbjct: 4 ERKFIAEGARKARVEKYLTKELKRAGFGGMDIARTPLGTQVTIFAEKPGIVIGKGGKLVH 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+LT + + + +E+ ++V N A AE L L G R+
Sbjct: 64 QLTQDLAQNYGVESPQIEV--QQVQNPSFNAQIMAERLANALERGWYFRK 111
>gi|386001179|ref|YP_005919478.1| 30S ribosomal protein S3 [Methanosaeta harundinacea 6Ac]
gi|357209235|gb|AET63855.1| 30S ribosomal protein S3P [Methanosaeta harundinacea 6Ac]
Length = 302
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV DG A ++E L++EL+ GY G+ + TP+ +I + A + V+G+ G+ IR
Sbjct: 4 EKKFVEDGFTKALVHEYLSKELSRAGYGGMTMNRTPMGIQITVYAEKPGMVIGKGGKLIR 63
Query: 68 ELTSVVQKRFKF--PENSV------ELYAEKVNNR 94
+LT + + F+ P+ V EL A+ V NR
Sbjct: 64 KLTRDLDRNFRLDNPQIDVQDVGKAELNAQVVANR 98
>gi|426369813|ref|XP_004051878.1| PREDICTED: 40S ribosomal protein S3 isoform 5 [Gorilla gorilla
gorilla]
Length = 154
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 28/40 (70%)
Query: 95 GLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
GLCAIAQAESLRYKLLGGLAVRR + + + + C
Sbjct: 6 GLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGC 45
>gi|410670345|ref|YP_006922716.1| 30S ribosomal protein S3P [Methanolobus psychrophilus R15]
gi|409169473|gb|AFV23348.1| 30S ribosomal protein S3P [Methanolobus psychrophilus R15]
Length = 310
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A ++E ++L + GY G+E+ TP+ T+I I A + V+G+ G+ IR
Sbjct: 4 EKKFVQEGYVKASMDEYFAKQLNKAGYGGMELNRTPMGTQITIYAEKPGMVIGKAGKVIR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+LT + + + ++ ++ A++V L A A L + G R+
Sbjct: 64 KLTRDIDRMYDI--DNPQIDAQEVRRPELNAQMMATRLASSIERGWYFRK 111
>gi|219851113|ref|YP_002465545.1| 30S ribosomal protein S3 [Methanosphaerula palustris E1-9c]
gi|219545372|gb|ACL15822.1| ribosomal protein S3 [Methanosphaerula palustris E1-9c]
Length = 234
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFVA+GV + L R+L GY G+++ TP+ T++ I A + V+G+ G+ +R
Sbjct: 4 ERKFVAEGVRKVRVERFLLRDLKRAGYGGMDIARTPLGTQVTIYAEKPGIVIGKGGKVVR 63
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+LT + + +E+ ++V N A AE L L G R+
Sbjct: 64 QLTQDLATTYGIESPQIEV--QQVQNPNYNAQIMAERLANALERGWYFRK 111
>gi|15897617|ref|NP_342222.1| 30S ribosomal protein S3 [Sulfolobus solfataricus P2]
gi|284174942|ref|ZP_06388911.1| 30S ribosomal protein S3P [Sulfolobus solfataricus 98/2]
gi|384434231|ref|YP_005643589.1| 30S ribosomal protein S3 [Sulfolobus solfataricus 98/2]
gi|11134364|sp|Q9UXA0.1|RS3_SULSO RecName: Full=30S ribosomal protein S3
gi|6015765|emb|CAB57592.1| ribosomal protein S3 (HMAS3) [Sulfolobus solfataricus P2]
gi|13813882|gb|AAK41012.1| SSU ribosomal protein S3AB (rps3AB) [Sulfolobus solfataricus P2]
gi|261602385|gb|ACX91988.1| ribosomal protein S3 [Sulfolobus solfataricus 98/2]
Length = 229
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 2/114 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
KR F+ + +++E L ++ Y+GVEV TP+ T +II A R ++G GR I+
Sbjct: 5 KRYFLEKSIVKVKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+L + +K F EN ++ V N L A A L L G RR I
Sbjct: 65 QLAQIFEKVFGL-ENP-QITITNVENPELNARVMAFRLAIALEKGYHFRRAAFI 116
>gi|150401811|ref|YP_001325577.1| 30S ribosomal protein S3 [Methanococcus aeolicus Nankai-3]
gi|171460867|sp|A6UWU3.1|RS3_META3 RecName: Full=30S ribosomal protein S3
gi|150014514|gb|ABR56965.1| ribosomal protein S3 [Methanococcus aeolicus Nankai-3]
Length = 208
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 58/110 (52%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+ + V ++E L +L GYS ++V+ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFIKENVMETLVDEYLKNKLPRAGYSHMDVKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
ELT + ++ N ++ +++ + L A A+ + L G+ RR
Sbjct: 63 ELTETIATKYGV--NKPQIEVKQIESPDLDAGVVAQKIASSLERGMHFRR 110
>gi|147919328|ref|YP_686936.1| 30S ribosomal protein S3P [Methanocella arvoryzae MRE50]
gi|121687826|sp|Q0W1Y3.1|RS3_UNCMA RecName: Full=30S ribosomal protein S3
gi|110622332|emb|CAJ37610.1| 30S ribosomal protein S3P [Methanocella arvoryzae MRE50]
Length = 279
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++KFV +G A ++E +L GY G+E+ TP+ T+I ++A + ++G+ G+ IR
Sbjct: 4 EKKFVQEGFKKAMVDEYFLEKLERAGYGGMEINRTPMGTQITLKAEKPGMIIGKAGKSIR 63
Query: 68 ELTSVVQKRFKFPENSVEL 86
T + RFK +++
Sbjct: 64 RYTKEMDMRFKMDNPQIDV 82
>gi|408381916|ref|ZP_11179463.1| 30S ribosomal protein S3P [Methanobacterium formicicum DSM 3637]
gi|407815364|gb|EKF85949.1| 30S ribosomal protein S3P [Methanobacterium formicicum DSM 3637]
Length = 426
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 47/79 (59%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +EL GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLEKELDRAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVEL 86
+T ++ ++ VE+
Sbjct: 63 AITQNLKNSYELENPQVEV 81
>gi|385805558|ref|YP_005841956.1| 30S ribosomal protein S3 [Fervidicoccus fontis Kam940]
gi|383795421|gb|AFH42504.1| 30S ribosomal protein S3P [Fervidicoccus fontis Kam940]
Length = 251
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
KR F+ + +++E L ++ GY+GV+V TP+ T ++IRA R ++G +G+ I+
Sbjct: 5 KRYFIEKNMSVVKVDEYLAKQFYRAGYAGVDVYRTPLGTRVVIRAERPAFIIGRRGQTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
L++V + F EN ++ V N L A A L L G R+
Sbjct: 65 TLSNVFENYFGL-ENP-QITVMPVENPDLNARVVAFRLAVSLERGFHFRK 112
>gi|48477718|ref|YP_023424.1| 30S ribosomal protein S3 [Picrophilus torridus DSM 9790]
gi|61215562|sp|Q6L1C1.1|RS3_PICTO RecName: Full=30S ribosomal protein S3
gi|48430366|gb|AAT43231.1| small subunit ribosomal protein S3P [Picrophilus torridus DSM 9790]
Length = 217
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
K+++FV D + ++E L +E G+ G+E++ TP T I + R V+G G +I
Sbjct: 2 KEKRFVNDNIKRLLVSEYLRKENDNAGFGGMEMKRTPYGTNITLYVNRPGLVIGRHGTKI 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGL--------CAIAQAESLRYKLLGGLAVRRY 118
+E+T ++KRF +E+ ++VN L A++ + Y+ G ++R+
Sbjct: 62 KEMTETLEKRFAIESPQIEV--KEVNTPDLNPQIASKKIALSLEKGWNYRKAGNTSLRKM 119
Query: 119 I 119
I
Sbjct: 120 I 120
>gi|52550170|gb|AAU84019.1| SSU ribosomal protein S3p [uncultured archaeon GZfos35D7]
Length = 359
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 42/64 (65%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV G+ A ++E +++L GY+G+++ TP+ T+I I A + V+G+ G+ +R
Sbjct: 4 ERKFVQQGLNRARMSEYFSKQLERAGYAGMQINRTPMGTQITIFAEKPGMVIGKGGKSVR 63
Query: 68 ELTS 71
LTS
Sbjct: 64 NLTS 67
>gi|268323281|emb|CBH36869.1| putative 30S ribosomal protein S3P [uncultured archaeon]
Length = 234
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 52/92 (56%), Gaps = 8/92 (8%)
Query: 11 FVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELT 70
FV +G+ ++E +EL GY G++++ TP+ T+I + + ++G+ G+RI+++T
Sbjct: 6 FVEEGIKKVRMDEYFQKELERAGYGGMDIKRTPMGTQITVHVEKPGMIIGKNGKRIKKVT 65
Query: 71 SVVQKRFKF--------PENSVELYAEKVNNR 94
+ K+ + P + EL A+ ++NR
Sbjct: 66 DEITKKQELDNPQIDVQPIAAPELSAQLMSNR 97
>gi|325968787|ref|YP_004244979.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28]
gi|323707990|gb|ADY01477.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28]
Length = 228
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 10/117 (8%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K + D V + E L LA+ GY +V TP+ T III A R ++G KG ++E
Sbjct: 12 KKILQDKVKEWMIKEFLNYRLAKQGYVDSDVLKTPLGTRIIIYAERPNRIIGRKGVIVKE 71
Query: 69 LTSVVQKRFKF--------PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
LT ++ ++ P S EL + + NR A A + ++++ G +A+R+
Sbjct: 72 LTDLLSRKLDVENPIIDVTPIQSPELNPKIIANR--IAWAMTKGVKFRRAGMIAIRQ 126
>gi|70606406|ref|YP_255276.1| 30S ribosomal protein S3 [Sulfolobus acidocaldarius DSM 639]
gi|449066618|ref|YP_007433700.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius N8]
gi|449068892|ref|YP_007435973.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius Ron12/I]
gi|76363394|sp|Q4JB46.1|RS3_SULAC RecName: Full=30S ribosomal protein S3
gi|68567054|gb|AAY79983.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius DSM 639]
gi|449035126|gb|AGE70552.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius N8]
gi|449037400|gb|AGE72825.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius Ron12/I]
Length = 231
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
KR F+ ++E L ++ Y+GVE+ TP+ T +II A R ++G+ G+ I+
Sbjct: 5 KRHFLQKAAIKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI-ISQIL 126
+L V++K F + + A N L A A L L G RR I I +I+
Sbjct: 65 QLAQVLEKFFGLENPQITVTA--AENPELNARVMAFRLAIALEKGYHFRRAAFITIRRIM 122
Query: 127 SNKAL 131
S+ A+
Sbjct: 123 SSGAV 127
>gi|118576057|ref|YP_875800.1| ribosomal protein S3 [Cenarchaeum symbiosum A]
gi|152060854|sp|A0RVX9.1|RS3_CENSY RecName: Full=30S ribosomal protein S3
gi|118194578|gb|ABK77496.1| ribosomal protein S3 [Cenarchaeum symbiosum A]
Length = 261
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 54/117 (46%), Gaps = 17/117 (14%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRF--K 78
L E L + + G+SGVEV P T+I + TR V+G KG IRELT ++K F K
Sbjct: 17 LREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFDLK 76
Query: 79 FPENSV------ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNK 129
P+ V ELY + NR I + + R R + I QI+ K
Sbjct: 77 SPQVDVKEIETPELYPGVMCNRMASHIERGTAFR---------RATMWTIQQIMEKK 124
>gi|84489702|ref|YP_447934.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091]
gi|121729293|sp|Q2NFW2.1|RS3_METST RecName: Full=30S ribosomal protein S3
gi|84373021|gb|ABC57291.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091]
Length = 252
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 3/124 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +L GY G++++VTPV T +I+ A + V+G G+ +R
Sbjct: 3 EKDFVKEGLKRTRIDEYLETKLERAGYGGMDIQVTPVGTMVIVYAEKPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL-IISQIL 126
+T ++ F VE+ ++V+ L A + L G+ RR II +I+
Sbjct: 63 AITKTLKNNFDLENPQVEV--KEVDVPELNPRIMAHKVVAMLQRGMQFRRVAYSIIRRIM 120
Query: 127 SNKA 130
S A
Sbjct: 121 SAGA 124
>gi|332796534|ref|YP_004458034.1| 30S ribosomal protein S3 [Acidianus hospitalis W1]
gi|332694269|gb|AEE93736.1| ribosomal protein S3 [Acidianus hospitalis W1]
Length = 227
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
L+E L ++ Y+GV++ TP+ T III A R ++G+ G+ I++L V +K F
Sbjct: 18 LDEYLAKQFYNAEYAGVDIIKTPMGTRIIIYAGRPAMIIGKGGKTIKQLAQVFEKFFNL- 76
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI-ISQILSNKAL 131
EN ++ V+N L A A L L G RR I I +I++ AL
Sbjct: 77 ENP-QITVTNVDNPELNARVMAFRLAVALEKGYHFRRAAFITIRRIMNAGAL 127
>gi|156937383|ref|YP_001435179.1| 30S ribosomal protein S3 [Ignicoccus hospitalis KIN4/I]
gi|172044464|sp|A8AA20.1|RS3_IGNH4 RecName: Full=30S ribosomal protein S3
gi|156566367|gb|ABU81772.1| SSU ribosomal protein S3P [Ignicoccus hospitalis KIN4/I]
Length = 241
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + +++E L + GYS VE++ TP+ T +II A R+ ++G +G+ I+
Sbjct: 9 KKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAIIGRRGQTIK 68
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
++T V+++ F P V + KV L A A L L G RR
Sbjct: 69 QITKVLEEWFGIPNPQVTVV--KVEEPELDARVMAFRLANALQRGFHFRR 116
>gi|325958537|ref|YP_004290003.1| 30S ribosomal protein S3 [Methanobacterium sp. AL-21]
gi|325329969|gb|ADZ09031.1| ribosomal protein S3 [Methanobacterium sp. AL-21]
Length = 299
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L EL GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLENELERAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRFKFPENSVEL 86
+T ++ + VE+
Sbjct: 63 SITQNLKTGYGLENPQVEV 81
>gi|307594499|ref|YP_003900816.1| 30S ribosomal protein S3 [Vulcanisaeta distributa DSM 14429]
gi|307549700|gb|ADN49765.1| ribosomal protein S3 [Vulcanisaeta distributa DSM 14429]
Length = 228
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 10/117 (8%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K + D + + E L LA+ GY +V TP+ T II+ A R ++G KG ++E
Sbjct: 12 KKILQDKIKEWMIKEFLNYRLAKQGYVDSDVLKTPLGTRIIVYAERPNRIIGRKGVIVKE 71
Query: 69 LTSVVQKRFKF--------PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
LT ++ K+ + P + EL + + NR A A + ++++ G +A+R+
Sbjct: 72 LTELLSKKLEVENPIIDVTPIQNPELNPKIIANR--IAWAMTKGVKFRRAGMIAIRQ 126
>gi|134045220|ref|YP_001096706.1| 30S ribosomal protein S3P [Methanococcus maripaludis C5]
gi|189045017|sp|A4FWB6.1|RS3_METM5 RecName: Full=30S ribosomal protein S3
gi|132662845|gb|ABO34491.1| SSU ribosomal protein S3P [Methanococcus maripaludis C5]
Length = 211
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
ELT + K + +E+ ++V N L + L G+ RR
Sbjct: 63 ELTETLAKEYAVKNPQIEV--KQVENPDLDPAIVGHKIASSLERGMHFRR 110
>gi|257076565|ref|ZP_05570926.1| 30S ribosomal protein S3P [Ferroplasma acidarmanus fer1]
Length = 228
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 62/125 (49%), Gaps = 10/125 (8%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+ + K++KFV+D + + E L E G+ G++++ TP T I + R V+G
Sbjct: 4 SDMMKEKKFVSDNIKKLLVTEYLQSENDSAGFGGMDMKRTPFGTNITLYVNRPGLVIGRH 63
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGL--------CAIAQAESLRYKLLGGLA 114
G +I+ +TS+++ ++ +E+ ++V N L A++ + Y+ G
Sbjct: 64 GSKIKAMTSILETKYGLESPQIEV--KEVENADLNPQVISKKIALSLEKGWNYRKAGNTT 121
Query: 115 VRRYI 119
+RR I
Sbjct: 122 LRRII 126
>gi|150399466|ref|YP_001323233.1| 30S ribosomal protein S3P [Methanococcus vannielii SB]
gi|171460840|sp|A6UQ49.1|RS3_METVS RecName: Full=30S ribosomal protein S3
gi|150012169|gb|ABR54621.1| ribosomal protein S3 [Methanococcus vannielii SB]
Length = 211
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 45/79 (56%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R F+A+ V ++E +L GYS +E++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFIAENVSETLIDEYFKGKLVRAGYSHLELKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVEL 86
ELT + + +K +E+
Sbjct: 63 ELTDTLTEVYKVENPQIEV 81
>gi|124028161|ref|YP_001013481.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456]
gi|152060866|sp|A2BMC5.1|RS3_HYPBU RecName: Full=30S ribosomal protein S3
gi|123978855|gb|ABM81136.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456]
Length = 247
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
KR F+ + +++E L + GY+GV++ P+ T +II A R ++G +G IR
Sbjct: 5 KRYFIKKAMVQTQIDEYLAKRFYRAGYAGVQIIQFPLGTRVIIYAERPAMIIGRRGETIR 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCA 98
+L ++ + F ++ ++ +V N L A
Sbjct: 65 QLAAIFEHEFGL--SNPQITVRRVENPDLNA 93
>gi|152060913|sp|A1RXG6.2|RS3_THEPD RecName: Full=30S ribosomal protein S3
Length = 202
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
RK ++ G+ + LNE L R+L Y + TP+ T++I+ A V+G KG I+
Sbjct: 6 RKVISQGLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKA 65
Query: 69 LTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+ V+++ F +++ +V N+ L A A + L+ G+ RR L+
Sbjct: 66 IAEVLEREFGIENPQIDVV--EVPNQDLNAKIMAYRVARALVRGVRFRRAALV 116
>gi|227827697|ref|YP_002829477.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.14.25]
gi|227830393|ref|YP_002832173.1| 30S ribosomal protein S3 [Sulfolobus islandicus L.S.2.15]
gi|229579212|ref|YP_002837610.1| 30S ribosomal protein S3 [Sulfolobus islandicus Y.G.57.14]
gi|229582036|ref|YP_002840435.1| 30S ribosomal protein S3 [Sulfolobus islandicus Y.N.15.51]
gi|229584901|ref|YP_002843403.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.16.27]
gi|238619868|ref|YP_002914694.1| 30S ribosomal protein S3 [Sulfolobus islandicus M.16.4]
gi|284997900|ref|YP_003419667.1| 30S ribosomal protein S3 [Sulfolobus islandicus L.D.8.5]
gi|385773369|ref|YP_005645935.1| 30S ribosomal protein S3 [Sulfolobus islandicus HVE10/4]
gi|385776007|ref|YP_005648575.1| 30S ribosomal protein S3 [Sulfolobus islandicus REY15A]
gi|227456841|gb|ACP35528.1| ribosomal protein S3 [Sulfolobus islandicus L.S.2.15]
gi|227459493|gb|ACP38179.1| ribosomal protein S3 [Sulfolobus islandicus M.14.25]
gi|228009926|gb|ACP45688.1| ribosomal protein S3 [Sulfolobus islandicus Y.G.57.14]
gi|228012752|gb|ACP48513.1| ribosomal protein S3 [Sulfolobus islandicus Y.N.15.51]
gi|228019951|gb|ACP55358.1| ribosomal protein S3 [Sulfolobus islandicus M.16.27]
gi|238380938|gb|ACR42026.1| ribosomal protein S3 [Sulfolobus islandicus M.16.4]
gi|284445795|gb|ADB87297.1| ribosomal protein S3 [Sulfolobus islandicus L.D.8.5]
gi|323474755|gb|ADX85361.1| ribosomal protein S3 [Sulfolobus islandicus REY15A]
gi|323477483|gb|ADX82721.1| ribosomal protein S3 [Sulfolobus islandicus HVE10/4]
Length = 216
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 2/102 (1%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
+++E L ++ Y+GVEV TP+ T +II A R ++G GR I++L + +K F
Sbjct: 4 KIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIKQLAQIFEKVFGL 63
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
EN ++ V N L A A L L G RR I
Sbjct: 64 -ENP-QITITNVENPELNARVMAFRLAIALEKGYHFRRAAFI 103
>gi|305662597|ref|YP_003858885.1| 30S ribosomal protein S3 [Ignisphaera aggregans DSM 17230]
gi|304377166|gb|ADM27005.1| SSU ribosomal protein S3P [Ignisphaera aggregans DSM 17230]
Length = 209
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 8/120 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
++ K F+ G+ ++E L + GY+GV++ TP+ T +II A R ++G +G+
Sbjct: 2 VNIKNYFIEQGIKKVAVDEYLASKFWRAGYAGVDLIRTPLGTRVIIYAARPGLIIGRRGQ 61
Query: 65 RIRELTSVVQKRFKFPENS----VELYAEKVNNRGLC---AIAQAESLRYKLLGGLAVRR 117
+R + V++K F EN VE +N R + A+A + ++ G +A+RR
Sbjct: 62 TLRTIQLVIEKLFGI-ENPQITVVEAENPDLNARIVAFNIALALERGIHFRRAGFIALRR 120
>gi|333987673|ref|YP_004520280.1| 30S ribosomal protein S3 [Methanobacterium sp. SWAN-1]
gi|333825817|gb|AEG18479.1| ribosomal protein S3 [Methanobacterium sp. SWAN-1]
Length = 315
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
++ FV +G+ ++E L +L GY G+E++VTP+ T +++ A R V+G G+ +R
Sbjct: 3 EKDFVTEGLKRTRIDEYLETQLERAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVR 62
Query: 68 ELTSVVQKRF 77
+T ++ +
Sbjct: 63 SITQNLKNDY 72
>gi|15920635|ref|NP_376304.1| 30S ribosomal protein S3P [Sulfolobus tokodaii str. 7]
gi|27734524|sp|Q975I7.1|RS3_SULTO RecName: Full=30S ribosomal protein S3
gi|15621418|dbj|BAB65413.1| 30S ribosomal protein S3P [Sulfolobus tokodaii str. 7]
Length = 225
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
++E L ++ Y+GVE+ TP+ T +II A R ++G+ G+ I++L ++++ F
Sbjct: 18 VDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPALIIGKGGKTIKQLAQMLERYFGL- 76
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI-ISQILSNKAL 131
++ ++ V N L A A L L G RR I I +I++ AL
Sbjct: 77 -DNPQITVTSVENPELNARVMAFRLAIALEKGYHFRRAAFITIRRIMNAGAL 127
>gi|315425856|dbj|BAJ47509.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
gi|315427714|dbj|BAJ49310.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
gi|343484671|dbj|BAJ50325.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
Length = 203
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 19 AELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFK 78
A++ E L +L + GV + TP+ T + I A R V+G KG+ I+E+T ++K+F
Sbjct: 15 ADIEEYLREKLKNAFFGGVSISFTPLGTRVTIYAMRPSRVIGPKGKVIKEITEALEKQFG 74
Query: 79 FPENSVELYAEKVNNRGLCAIAQ------AESLRYKLLGGLAVRR 117
V + +V +A+ A LRY+ +G AV+R
Sbjct: 75 VENPVVTVVEVEVPELNPYVMAERIAQDLARGLRYRRVGFWAVKR 119
>gi|45358967|ref|NP_988524.1| 30S ribosomal protein S3P [Methanococcus maripaludis S2]
gi|340624714|ref|YP_004743167.1| 30S ribosomal protein S3 [Methanococcus maripaludis X1]
gi|61215571|sp|Q6LXE7.1|RS3_METMP RecName: Full=30S ribosomal protein S3
gi|45047833|emb|CAF30960.1| SSU ribosomal protein S3P [Methanococcus maripaludis S2]
gi|339904982|gb|AEK20424.1| 30S ribosomal protein S3P [Methanococcus maripaludis X1]
Length = 211
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++ + TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
ELT + + +E+ ++V N L + L G+ R+
Sbjct: 63 ELTETLATEYSVKNPQIEV--KQVENPDLDPAVVGHKIASSLERGMHFRK 110
>gi|429217541|ref|YP_007175531.1| ribosomal protein S3, eukaryotic/archaeal type [Caldisphaera
lagunensis DSM 15908]
gi|429134070|gb|AFZ71082.1| ribosomal protein S3, eukaryotic/archaeal type [Caldisphaera
lagunensis DSM 15908]
Length = 247
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + A+++E L + GYSGV + + + T I I A R ++G KG IR
Sbjct: 5 KKYFLDQAMLRAKIDEYLAQNFYTAGYSGVHIIQSGLGTRIHIYAERPALIIGRKGATIR 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
L V QK F +V++ + +N L A QA + L G RR
Sbjct: 65 RLQGVFQKVFGL--ENVQVTVSQPDNTELDARIQAFRVARSLEMGYHFRR 112
>gi|340344786|ref|ZP_08667918.1| Ribosomal protein S3 [Candidatus Nitrosoarchaeum koreensis MY1]
gi|339519927|gb|EGP93650.1| Ribosomal protein S3 [Candidatus Nitrosoarchaeum koreensis MY1]
Length = 251
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 9/131 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + + G+S E+ TP+ T + + TR V+G KG
Sbjct: 1 MSAVKNVIKDNYNMMLLKDYLRVAIKDAGFSHAEISKTPMGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRFKF--PENS-VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL- 120
IRELT + FK P+ S VE+ +++ +C + L G A RR +
Sbjct: 61 GIRELTDKLATDFKLKNPQISVVEIAKPELSPSVMC-----NRMASHLERGTAFRRATMW 115
Query: 121 IISQILSNKAL 131
+ QI+ N A+
Sbjct: 116 TLKQIMDNGAM 126
>gi|150402573|ref|YP_001329867.1| 30S ribosomal protein S3P [Methanococcus maripaludis C7]
gi|189045018|sp|A6VGZ0.1|RS3_METM7 RecName: Full=30S ribosomal protein S3
gi|150033603|gb|ABR65716.1| ribosomal protein S3 [Methanococcus maripaludis C7]
Length = 211
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
ELT + + N+ ++ ++V + L + L G+ R+
Sbjct: 63 ELTETLSTEYAV--NNPQIEVKQVESPDLDPAIVGHKIASSLERGMHFRK 110
>gi|407462398|ref|YP_006773715.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus koreensis AR1]
gi|407046020|gb|AFS80773.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus koreensis AR1]
Length = 251
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + E G+S E+ TP T + + TR V+G KG
Sbjct: 1 MSSVKNVIKDNYNMMLLKDYLREAIKEAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENS-VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL- 120
IR+LT + F K P+ S VE+ +++ +C + L G A RR +
Sbjct: 61 GIRDLTDKLATDFGLKNPQISVVEIEKPELSPSVMC-----NRMASHLERGTAFRRATMW 115
Query: 121 IISQILSNKAL 131
+ QI+ N A+
Sbjct: 116 TLKQIMENGAM 126
>gi|159905652|ref|YP_001549314.1| 30S ribosomal protein S3P [Methanococcus maripaludis C6]
gi|226697730|sp|A9A9Q9.1|RS3_METM6 RecName: Full=30S ribosomal protein S3
gi|159887145|gb|ABX02082.1| ribosomal protein S3 [Methanococcus maripaludis C6]
Length = 211
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+R FV + V ++E +L GYS ++++ TP+ T I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 68 ELTSVVQKRFKFPENSVEL 86
ELT + + +E+
Sbjct: 63 ELTETLSTEYAVNNPQIEV 81
>gi|327400866|ref|YP_004341705.1| 30S ribosomal protein S3 [Archaeoglobus veneficus SNP6]
gi|327316374|gb|AEA46990.1| ribosomal protein S3 [Archaeoglobus veneficus SNP6]
Length = 246
Score = 43.1 bits (100), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV D + ++ E + +E+ G+ GV++ TP+ T++ + R V+G+ GRRIR
Sbjct: 4 ERKFVEDRIKKLKVKEWMIQEVRNAGFGGVDITRTPLGTQVTLFVERPGLVIGKGGRRIR 63
Query: 68 ELT 70
LT
Sbjct: 64 ALT 66
>gi|161528312|ref|YP_001582138.1| 30S ribosomal protein S3 [Nitrosopumilus maritimus SCM1]
gi|160339613|gb|ABX12700.1| ribosomal protein S3 [Nitrosopumilus maritimus SCM1]
Length = 251
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + E G+S E+ TP T + + TR V+G KG
Sbjct: 1 MSSVKNVIKDNYNMMLLKDYLRDAIKEAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENS-VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL- 120
IR+LT + F K P+ S VE+ +++ +C + L G A RR +
Sbjct: 61 GIRDLTDKLATDFGLKNPQISVVEIEKPELSPSVMC-----NRMASHLERGTAFRRATMW 115
Query: 121 IISQILSNKAL 131
+ QI+ N A+
Sbjct: 116 TLKQIMENGAM 126
>gi|347524202|ref|YP_004781772.1| 30S ribosomal protein S3 [Pyrolobus fumarii 1A]
gi|343461084|gb|AEM39520.1| ribosomal protein S3 [Pyrolobus fumarii 1A]
Length = 242
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ FV + A+++E L + GY+GV + P+ + I A R ++G G+ IR
Sbjct: 5 KKYFVQKALREAKIDEYLAKRFYRAGYAGVRIIELPIGHRVYIYAERPGMIIGRGGQTIR 64
Query: 68 ELTSVVQKRFKF--PENSV 84
EL + +K F P+ SV
Sbjct: 65 ELQYIFEKHFGLNNPQVSV 83
>gi|329765063|ref|ZP_08256647.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1]
gi|393796604|ref|ZP_10379968.1| 30S ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia BG20]
gi|329138440|gb|EGG42692.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 251
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 9/131 (6%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + + G+S E+ TP T + + TR V+G KG
Sbjct: 1 MSAVKNVIKDNYNMMLLKDYLRVAIKDAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENS-VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL- 120
IRELT + F K P+ S VE+ +++ +C A R G A RR +
Sbjct: 61 GIRELTDKLATDFGLKNPQISVVEIDKPELSPSVMCNRMAAHLER-----GTAFRRATMW 115
Query: 121 IISQILSNKAL 131
+ QI+ N A+
Sbjct: 116 TLKQIMENGAM 126
>gi|167043045|gb|ABZ07757.1| putative ribosomal protein S3, C-terminal domain protein
[uncultured marine microorganism HF4000_ANIW141A21]
Length = 214
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
++E L + + GY G E+ +PV T I I T+ V+G +G IRELT ++K F+
Sbjct: 11 IDEYLEKNIESAGYGGFEIITSPVGTRITIYVTKPGLVIGRRGIGIRELTENLEKIFELQ 70
Query: 81 ENSVELYAEKV---NNRGLC 97
+ ++ ++ N R +C
Sbjct: 71 NLQISVFEVEIPEQNARIMC 90
>gi|296242591|ref|YP_003650078.1| 30S ribosomal protein S3 [Thermosphaera aggregans DSM 11486]
gi|296095175|gb|ADG91126.1| SSU ribosomal protein S3P [Thermosphaera aggregans DSM 11486]
Length = 229
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K F++ G+ ++E L + GY+GVEV TP ++I A ++G G I+
Sbjct: 7 KSYFLSYGLKKLMIDEFLANYFKDAGYAGVEVFRTPTGHRVVIYAEYPGRLIGRGGSVIK 66
Query: 68 ELTSVVQKRF 77
+LT+++Q RF
Sbjct: 67 KLTTILQTRF 76
>gi|389860655|ref|YP_006362895.1| 30S ribosomal protein S3 [Thermogladius cellulolyticus 1633]
gi|388525559|gb|AFK50757.1| ribosomal protein S3 [Thermogladius cellulolyticus 1633]
Length = 228
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ G+ +++ L + GY+GVE+ TP ++I A ++G G IR
Sbjct: 7 KQYFINLGLKKTMIDQFLASYFVDAGYAGVELYKTPTGHRVVIYAEYPGRLIGRGGSVIR 66
Query: 68 ELTSVVQKRF 77
+LT++ Q RF
Sbjct: 67 KLTAIFQTRF 76
>gi|352682734|ref|YP_004893258.1| 30S ribosomal protein S3p [Thermoproteus tenax Kra 1]
gi|350275533|emb|CCC82180.1| 30S ribosomal protein S3p [Thermoproteus tenax Kra 1]
Length = 216
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 13/120 (10%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+K + D V + E L +LA GY EV TP+ T I+I A R ++G+KG ++E
Sbjct: 12 KKILQDNVKRWMIKEFLEYKLARLGYIYSEVLKTPLGTRIVIYAERPSRIIGKKGAVVKE 71
Query: 69 LTSVVQKRFKF--PENSV---------ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
L+ ++ + P+ V E++ + + R A A A+ +R++ + +AVR+
Sbjct: 72 LSQILSAKMGVDNPQIDVIDISKVDVPEMFPKVIAYR--IANAMAKGIRFRRVAFVAVRQ 129
>gi|77024944|gb|ABA61371.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 269
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
Query: 3 TQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEK 62
+Q S RKF+ V + E L + + G+ G++ + TP T++ + A R V+G K
Sbjct: 2 SQNSTIRKFIDRNVERLLVREFLLSKTEKAGFGGLDFQRTPEGTKVTLSAERVGMVIGRK 61
Query: 63 GRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
G+ I EL +Q F +E+ +++N L A A L L G RR
Sbjct: 62 GKIINELQRRLQNDFNLENPRLEVA--EIDNPALNAQVMASKLASALERGWYFRR 114
>gi|374724270|gb|EHR76350.1| 30S ribosomal protein S3 / S3P [uncultured marine group II
euryarchaeote]
Length = 232
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
MA + S R V V + E L + G+ +++R TP TE+ + A R V+G
Sbjct: 1 MAGKKSTLRTIVNRNVERHLVKEFLMQNTKRSGFGALDIRRTPQGTEVTVHAERPGMVIG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
KG+ I EL + + F EN +L E++ L A AE + L G RR
Sbjct: 61 RKGKIINELQKRLNEEFDL-ENP-KLKVEEIEKATLNAQVMAEKIASALERGWYHRR 115
>gi|327311857|ref|YP_004338754.1| 30S ribosomal protein S3 [Thermoproteus uzoniensis 768-20]
gi|326948336|gb|AEA13442.1| 30S ribosomal protein S3P [Thermoproteus uzoniensis 768-20]
Length = 194
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF- 79
+ E L +LA GY E+ TP+ T I+I A R ++G+KG ++EL+ ++ +
Sbjct: 2 IKEFLEYKLARLGYVDSEILKTPLGTRIVIYAERPSRIIGKKGAVVKELSQILGSKLGVE 61
Query: 80 -PENSV---------ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
P+ V E++ + V R A A A+ +R++ + +A+R+
Sbjct: 62 NPQIDVIDISKVDVPEMFPKVVAYR--IANAMAKGIRFRRVAFIAIRQ 107
>gi|13541161|ref|NP_110849.1| 30S ribosomal protein S3P [Thermoplasma volcanium GSS1]
gi|27734525|sp|Q97BX1.1|RS3_THEVO RecName: Full=30S ribosomal protein S3
gi|14324549|dbj|BAB59476.1| ribosomal protein small subunit S3 [Thermoplasma volcanium GSS1]
Length = 225
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 6/119 (5%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
K+RKFV + V + E L +E G+ + ++ TP T I + R V+G +G ++
Sbjct: 2 KERKFVNEAVKRLLVYEYLVKETENAGFGKMSMKRTPFGTNITLYVNRPGLVIGRRGSKV 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESL------RYKLLGGLAVRRYI 119
+++T ++K++ +E+ K + IA+ +L Y+ G +++R I
Sbjct: 62 QQMTETLEKKYAIETPQIEVKDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLKRTI 120
>gi|47079410|gb|AAT10153.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 307
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Query: 1 MATQISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLG 60
M Q + R F+ V + E L RE G+ G+E TP T++ + A + V+G
Sbjct: 1 MKRQSNTIRTFINRNVERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIG 60
Query: 61 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL 120
+G+ I EL ++ FK EN L ++ L A A L L G RR
Sbjct: 61 RRGKVIHELQYRLKSDFKL-ENP-RLEVNEIEEPRLNAQVMASRLASSLERGWFFRRAGH 118
Query: 121 IISQILSNKALRSC 134
+Q + + R C
Sbjct: 119 STAQNIMDAGARGC 132
>gi|119719404|ref|YP_919899.1| ribosomal protein S3 [Thermofilum pendens Hrk 5]
gi|119524524|gb|ABL77896.1| SSU ribosomal protein S3P [Thermofilum pendens Hrk 5]
Length = 187
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
LNE L R+L Y + TP+ T++I+ A V+G KG I+ + V+++ F
Sbjct: 3 LNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKAIAEVLEREFGIE 62
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI 121
+++ +V N+ L A A + L+ G+ RR L+
Sbjct: 63 NPQIDVV--EVPNQDLNAKIMAYRVARALVRGVRFRRAALV 101
>gi|269861307|ref|XP_002650365.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348]
gi|220066196|gb|EED43690.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348]
Length = 214
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 53/110 (48%)
Query: 10 KFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
+ + +G AEL+E+ + ++ Y+G+E+++ +I I+ +L +K ++L
Sbjct: 8 QIIKEGKIKAELDELFGKLFQKETYAGIELKMNQTPIQIFIKVLNPAELLEKKPMIQKQL 67
Query: 70 TSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
+++ +R + + EK+ ++ L AE LR + +R I
Sbjct: 68 QNMIAQRLNMIPEHIRIVFEKIIDKALEPAYHAELLRQAFINVQPYKRTI 117
>gi|302348032|ref|YP_003815670.1| 30S ribosomal protein S3 [Acidilobus saccharovorans 345-15]
gi|302328444|gb|ADL18639.1| 30S ribosomal protein S3P [Acidilobus saccharovorans 345-15]
Length = 238
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 2/110 (1%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K F+ G+ +++E L + GY+GV++ + + T + I A R V+G +G IR
Sbjct: 5 KSYFLRQGLTRVKVDEYLAQNFYTAGYAGVQIVQSGLGTRVHIFAERPALVIGRRGATIR 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+L +V++K F V++ + +N L A QA + L G RR
Sbjct: 65 KLQAVLEKVFGL--EGVQVTVSQPDNMELNARVQAFRIARALEMGYHFRR 112
>gi|193083860|gb|ACF09541.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-85-F5]
Length = 231
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Query: 23 EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
E L +E G+ G+ TP T++ + A + V+G +G+ I EL +Q+ FK
Sbjct: 21 EYLLKETERAGFGGLHFNRTPEGTKVTLSAEQVGRVIGRRGKVIHELQRRLQEDFKL--T 78
Query: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
+ +L E++ + + A A L L G RR Q + + R C
Sbjct: 79 NPQLEVEEIEDSRINAQVMASRLASSLERGWFFRRAGHSTVQNIMDAGARGC 130
>gi|170516818|gb|ACB15220.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 258
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E L RE G+ G+ TP T+I +RA + V+G +G+ I EL++ ++ F
Sbjct: 20 VREYLLRETERAGFGGLTFNRTPDGTKISLRAEQVGRVIGRRGKVIHELSARLKNDFFL- 78
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
+ L E+V L A A + L G RR +Q + + R C
Sbjct: 79 -DRPHLDVEEVTEPRLNAQIMASRMSSSLERGWFFRRAGHGTAQQIMDAGARGC 131
>gi|146302882|ref|YP_001190198.1| 30S ribosomal protein S3 [Metallosphaera sedula DSM 5348]
gi|172046893|sp|A4YCX2.1|RS3_METS5 RecName: Full=30S ribosomal protein S3
gi|145701132|gb|ABP94274.1| SSU ribosomal protein S3P [Metallosphaera sedula DSM 5348]
Length = 240
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + ++E L +E Y+G E+ TP+ T + I A R ++G+ G+ I+
Sbjct: 5 KKYFLQKSMTRVMVDEFLAKEYYNAEYAGSEISKTPMGTRVTIYAGRPAIIIGKDGKTIK 64
Query: 68 ELTSVVQKRFKF 79
L +++K F
Sbjct: 65 RLAQILEKYFNL 76
>gi|297527401|ref|YP_003669425.1| 30S ribosomal protein S3 [Staphylothermus hellenicus DSM 12710]
gi|297256317|gb|ADI32526.1| ribosomal protein S3 [Staphylothermus hellenicus DSM 12710]
Length = 225
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRF 77
L+E L + GY+G+E+ TP +II A V+G G IR+L +++Q F
Sbjct: 20 LDEFLANYFKDAGYAGMELYKTPTGYRVIIYAEYPGRVIGRGGSIIRKLMTIMQTHF 76
>gi|284162454|ref|YP_003401077.1| 30S ribosomal protein S3 [Archaeoglobus profundus DSM 5631]
gi|284012451|gb|ADB58404.1| ribosomal protein S3 [Archaeoglobus profundus DSM 5631]
Length = 219
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+ D + ++ E L E+ G+ GV++ TP+ T++ + R V+G GRRI+
Sbjct: 4 ERKFIRDRLIKLKVKEWLKEEVKNAGFGGVDIVRTPLGTQVSLFVERPGLVIGRGGRRIK 63
Query: 68 ELTSVVQKRFK-FPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
++Q++ K F ++ +L ++V A A L L G RR
Sbjct: 64 ----ILQEKLKEFGLDNPQLSVDEVKRPEFNAQLMATLLARALERGWYFRR 110
>gi|374633062|ref|ZP_09705429.1| ribosomal protein S3, eukaryotic/archaeal type [Metallosphaera
yellowstonensis MK1]
gi|373524546|gb|EHP69423.1| ribosomal protein S3, eukaryotic/archaeal type [Metallosphaera
yellowstonensis MK1]
Length = 231
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + ++E L ++ Y+G E+ TP+ T +II A R ++G+ G+ I+
Sbjct: 5 KKYFLQKSLTRVMVDEYLAKQYYNAEYAGSEIIKTPMGTRVIIYAGRPAMIIGKGGKTIK 64
Query: 68 ELTSVVQKRFKF 79
+L ++++ F
Sbjct: 65 QLHQILERYFNL 76
>gi|288931516|ref|YP_003435576.1| 30S ribosomal protein S3 [Ferroglobus placidus DSM 10642]
gi|288893764|gb|ADC65301.1| ribosomal protein S3 [Ferroglobus placidus DSM 10642]
Length = 223
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKF+ D V + E + E+ G+ G+++ TP+ T++ + R V+G GRRI+
Sbjct: 4 ERKFIEDKVKKLMVKEWIVEEVRNAGFGGLDIVRTPLGTQVTLFVERPGLVIGRGGRRIK 63
Query: 68 ELTS 71
LT
Sbjct: 64 ALTE 67
>gi|226482852|emb|CAX79393.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482854|emb|CAX79394.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 138
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/24 (79%), Positives = 20/24 (83%)
Query: 94 RGLCAIAQAESLRYKLLGGLAVRR 117
RGL AIAQAESLRYKL GL VR+
Sbjct: 4 RGLSAIAQAESLRYKLTYGLPVRK 27
>gi|126459168|ref|YP_001055446.1| 30S ribosomal protein S3 [Pyrobaculum calidifontis JCM 11548]
gi|126248889|gb|ABO07980.1| SSU ribosomal protein S3P [Pyrobaculum calidifontis JCM 11548]
Length = 220
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF- 79
+ E L LA+ GY E+ TP+ T I+I A R ++G KG ++E++S++ +
Sbjct: 28 IKEFLEYRLAKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSSILANKLGVE 87
Query: 80 -PENSV---------ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
P+ V EL+ + V R A A A +R++ + +AVR+
Sbjct: 88 NPQIDVIDVSKIEAPELFPKVVAYR--IANAMARGVRFRRVMFVAVRQ 133
>gi|152060898|sp|A3MTL3.2|RS3_PYRCJ RecName: Full=30S ribosomal protein S3
Length = 216
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 13/108 (12%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF- 79
+ E L LA+ GY E+ TP+ T I+I A R ++G KG ++E++S++ +
Sbjct: 24 IKEFLEYRLAKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSSILANKLGVE 83
Query: 80 -PENSV---------ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
P+ V EL+ + V R A A A +R++ + +AVR+
Sbjct: 84 NPQIDVIDVSKIEAPELFPKVVAYR--IANAMARGVRFRRVMFVAVRQ 129
>gi|407464758|ref|YP_006775640.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus sp. AR2]
gi|407047946|gb|AFS82698.1| 30S ribosomal protein S3 [Candidatus Nitrosopumilus sp. AR2]
Length = 262
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + + G+S E+ TPV T + + TR V+G KG
Sbjct: 1 MSAVKNVIKDNYNMMLLKDYLREAIKDAGFSHAEISKTPVGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSV 84
IR LT + F K P+ SV
Sbjct: 61 GIRALTDKLASDFGLKNPQISV 82
>gi|386876664|ref|ZP_10118757.1| ribosomal protein S3 [Candidatus Nitrosopumilus salaria BD31]
gi|386805532|gb|EIJ65058.1| ribosomal protein S3 [Candidatus Nitrosopumilus salaria BD31]
Length = 251
Score = 38.5 bits (88), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 7/130 (5%)
Query: 5 ISKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGR 64
+S + + D L + L + + G+S E+ TPV T + + TR V+G KG
Sbjct: 1 MSAVKNVIKDNYNMMLLRDYLREAIKDAGFSHAEISKTPVGTRVALHVTRPGIVIGRKGS 60
Query: 65 RIRELTSVVQKRF--KFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYIL-I 121
IR LT + F K P+ SV +++ L + L G A RR +
Sbjct: 61 GIRSLTEKLATDFGLKNPQISV----VEIDKPELAPSVMCNRMASHLERGTAFRRATMWT 116
Query: 122 ISQILSNKAL 131
+ QI+ A+
Sbjct: 117 LKQIMEGGAM 126
>gi|330835819|ref|YP_004410547.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4]
gi|329567958|gb|AEB96063.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4]
Length = 239
Score = 38.5 bits (88), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
K+ F+ + ++E L +E Y+G E+ TP+ T + I A R ++G+ G+ I+
Sbjct: 5 KKYFLQKSMTRVMVDEFLAKEYYNAEYAGSEISKTPMGTRVTIYAGRPAIIIGKDGKTIK 64
Query: 68 ELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILI-ISQIL 126
L ++++ F S ++ + L A A L L G RR I I +I+
Sbjct: 65 RLAQILERYFNL--ESPQITVAQPEKPELNARVMAFRLAVTLEKGYHFRRAAFITIRKIM 122
Query: 127 SNKAL 131
+ AL
Sbjct: 123 NAGAL 127
>gi|126465922|ref|YP_001041031.1| 30S ribosomal protein S3 [Staphylothermus marinus F1]
gi|152060907|sp|A3DNB3.1|RS3_STAMF RecName: Full=30S ribosomal protein S3
gi|126014745|gb|ABN70123.1| SSU ribosomal protein S3P [Staphylothermus marinus F1]
Length = 224
Score = 38.5 bits (88), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRF 77
L+E L + GY+G+E+ TP ++I A ++G G IR+L +++Q F
Sbjct: 20 LDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIRKLMTIMQTHF 76
>gi|320101360|ref|YP_004176952.1| 30S ribosomal protein S3 [Desulfurococcus mucosus DSM 2162]
gi|319753712|gb|ADV65470.1| SSU ribosomal protein S3P [Desulfurococcus mucosus DSM 2162]
Length = 222
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRF 77
++E L + GY+ VE+ TP ++I A ++G G I++L++++Q RF
Sbjct: 20 IDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIKKLSTILQTRF 76
>gi|328951230|ref|YP_004368565.1| 30S ribosomal protein S3 [Marinithermus hydrothermalis DSM 14884]
gi|328451554|gb|AEB12455.1| ribosomal protein S3 [Marinithermus hydrothermalis DSM 14884]
Length = 247
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFP 80
+ E++TRE+ G + +++ + + A + ++G G I+ + + +QKR FP
Sbjct: 39 IRELITREVYHGGIARIDIERAADNVSVTVHAAKPGVIIGRGGETIKRMRAELQKR--FP 96
Query: 81 ENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
++ L ++V N L A A+ + ++ AVRR I
Sbjct: 97 NRTISLNVQEVPNPNLSAPLVAQRVAEQIERRFAVRRAI 135
>gi|291333640|gb|ADD93331.1| ribosomal protein S3 [uncultured archaeon MedDCM-OCT-S11-C441]
Length = 218
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 2/112 (1%)
Query: 23 EVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
E L +E G+ G+ TP T++ +RA + V+G +G+ I +L +Q+ F +
Sbjct: 21 EFLLKETERAGFGGLNFNRTPEGTKVTLRAEQVGRVIGRRGKVIHDLQRRLQEDFDL--D 78
Query: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKALRSC 134
+ +L E++ A A L L G RR Q + + R C
Sbjct: 79 NPQLEVEEIEESRTNAQVMASRLASSLERGWFFRRAGHSTVQNIMDAGARGC 130
>gi|171185213|ref|YP_001794132.1| 30S ribosomal protein S3 [Pyrobaculum neutrophilum V24Sta]
gi|170934425|gb|ACB39686.1| ribosomal protein S3- domain protein [Pyrobaculum neutrophilum
V24Sta]
Length = 224
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 13/108 (12%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF- 79
+ E L L++ GY E+ TP+ T I+I A R ++G+KG ++E+++++ +
Sbjct: 31 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGKKGAIVKEISNILMNKLGVE 90
Query: 80 -PENSV---------ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
P+ V E++ + V R A A A+ +R++ + +AVR+
Sbjct: 91 NPQIDVIDVSKIEAPEMFPKVVAYR--IANAMAKGVRFRRVMFVAVRQ 136
>gi|16082264|ref|NP_394722.1| 30S ribosomal protein S3P [Thermoplasma acidophilum DSM 1728]
gi|27734534|sp|Q9HIR5.1|RS3_THEAC RecName: Full=30S ribosomal protein S3
gi|10640611|emb|CAC12389.1| probable 30S ribosomal protein S3 [Thermoplasma acidophilum]
Length = 225
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Query: 7 KKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRI 66
K+RKF+ + V + E + +E G+ + ++ TP T I + R V+G +G ++
Sbjct: 2 KERKFINEAVKRLLVCEYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKV 61
Query: 67 RELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
+++T ++K++ +E+ + V + L A+ + L G + R+
Sbjct: 62 QQMTDTLEKKYGIETPQIEV--KDVKDPDLNPSVIAKKIALSLEKGWSYRK 110
>gi|218884480|ref|YP_002428862.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n]
gi|218766096|gb|ACL11495.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n]
Length = 223
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRF 77
++E L + GY+ VE+ TP ++I A ++G G I++L++++Q +F
Sbjct: 20 IDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIKKLSTILQNKF 76
>gi|294882949|ref|XP_002769895.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239873720|gb|EER02613.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 157
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/18 (94%), Positives = 17/18 (94%)
Query: 100 AQAESLRYKLLGGLAVRR 117
AQAESLRYKLLGGL VRR
Sbjct: 1 AQAESLRYKLLGGLPVRR 18
>gi|291228787|ref|XP_002734359.1| PREDICTED: high density lipoprotein binding protein-like
[Saccoglossus kowalevskii]
Length = 594
Score = 37.0 bits (84), Expect = 2.8, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Query: 22 NEVLTRELAEDGYSGVEVRV--------TPVRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
N+ +T + A+D G + R+ + V E II + V+G KG +++ +TS
Sbjct: 165 NDKVTVKGAKDCVEGAKNRILEIVQDLESQVTVECIIDQKNHRTVMGAKGSKVQAITSEY 224
Query: 74 QKRFKFPENSVELYAEKVNNRG 95
+ KFP+ ++ + AE N G
Sbjct: 225 EVGIKFPDRNMNMNAESNGNNG 246
>gi|119873216|ref|YP_931223.1| 30S ribosomal protein S3 [Pyrobaculum islandicum DSM 4184]
gi|152060899|sp|A1RV98.1|RS3_PYRIL RecName: Full=30S ribosomal protein S3
gi|119674624|gb|ABL88880.1| SSU ribosomal protein S3P [Pyrobaculum islandicum DSM 4184]
Length = 217
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 34/53 (64%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
+ E L +L++ GY E+ TP+ T I+I A R ++G+KG ++E+++++
Sbjct: 24 IKEFLEYKLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGKKGVIVKEISNIL 76
>gi|11499503|ref|NP_070744.1| 30S ribosomal protein S3P [Archaeoglobus fulgidus DSM 4304]
gi|6094176|sp|O28360.1|RS3_ARCFU RecName: Full=30S ribosomal protein S3
gi|2648625|gb|AAB89335.1| SSU ribosomal protein S3P (rps3P) [Archaeoglobus fulgidus DSM
4304]
Length = 229
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 8 KRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIR 67
+RKFV + + + E + E+ G+ GV++ TP+ T++ + R V+G+ GRRI+
Sbjct: 4 ERKFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIK 63
Query: 68 ELT 70
LT
Sbjct: 64 ALT 66
>gi|303233154|ref|ZP_07319827.1| ribosomal protein S3 [Atopobium vaginae PB189-T1-4]
gi|302480739|gb|EFL43826.1| ribosomal protein S3 [Atopobium vaginae PB189-T1-4]
Length = 236
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%)
Query: 20 ELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF 79
E+ + L + LA+ S VE+ + ++ I +R V+G+KG I +L + VQ+
Sbjct: 38 EIRKYLKKRLAKAALSRVEIERAGDKVKVSILTSRPGIVIGKKGGEIDDLRNDVQRIAGL 97
Query: 80 PENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRYI 119
P+ SV + ++ L A A+ + +L G +A RR +
Sbjct: 98 PKGSVHVEVVEIKQPDLDAQLTADRIAEQLEGRVAFRRAV 137
>gi|379004535|ref|YP_005260207.1| 30S ribosomal protein S3, eukaryotic/archaeal type [Pyrobaculum
oguniense TE7]
gi|375159988|gb|AFA39600.1| ribosomal protein S3, eukaryotic/archaeal type [Pyrobaculum
oguniense TE7]
Length = 220
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
+ E L +L++ GY E+ TP+ T I+I A R ++G KG ++E+++++
Sbjct: 24 IKEFLEYKLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSNIL 76
>gi|18312873|ref|NP_559540.1| 30S ribosomal protein S3 [Pyrobaculum aerophilum str. IM2]
gi|18160363|gb|AAL63722.1| ribosomal protein S3 [Pyrobaculum aerophilum str. IM2]
Length = 196
Score = 35.8 bits (81), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 13/108 (12%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKF- 79
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++ +
Sbjct: 2 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNILTTKLGVE 61
Query: 80 -PENSV---------ELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
P+ V E++ + V R A A A+ +R++ + +A+R+
Sbjct: 62 NPQIDVIDISKIEAPEMFPKVVAYR--IANAMAKGVRFRRVMFVAIRQ 107
>gi|153953503|ref|YP_001394268.1| penicillin-binding protein 2 [Clostridium kluyveri DSM 555]
gi|146346384|gb|EDK32920.1| Predicted penicillin-binding protein 2 [Clostridium kluyveri DSM
555]
Length = 896
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Query: 13 ADGVFFAELNEVLTRELAEDGYS---GVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
+D FFA +++V + L E+G S E++V P R E T+N L K +R R L
Sbjct: 93 SDSTFFATMDKVF-KILDENGESQQDDFELKVNPFRFEFRSDDENTRNTLEVKFKRDRGL 151
Query: 70 TSVVQKRFKFPENSVELYAEKVN-NRGLCAIAQAESLR-----YKLLGGLAV---RRYIL 120
++K+ K + K NR L I+ ++ + Y++ G ++ RR+++
Sbjct: 152 NEAIEKKIKSKNEDISDDDLKTQVNRELLKISAEDTFKALLKEYEIPNGYSLEEQRRFMI 211
Query: 121 I 121
I
Sbjct: 212 I 212
>gi|219854125|ref|YP_002471247.1| hypothetical protein CKR_0782 [Clostridium kluyveri NBRC 12016]
gi|219567849|dbj|BAH05833.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 901
Score = 35.8 bits (81), Expect = 5.2, Method: Composition-based stats.
Identities = 33/121 (27%), Positives = 58/121 (47%), Gaps = 13/121 (10%)
Query: 13 ADGVFFAELNEVLTRELAEDGYS---GVEVRVTPVRTEIIIRATRTQNVLGEKGRRIREL 69
+D FFA +++V + L E+G S E++V P R E T+N L K +R R L
Sbjct: 98 SDSTFFATMDKVF-KILDENGESQQDDFELKVNPFRFEFRSDDENTRNTLEVKFKRDRGL 156
Query: 70 TSVVQKRFKFPENSVELYAEKVN-NRGLCAIAQAESLR-----YKLLGGLAV---RRYIL 120
++K+ K + K NR L I+ ++ + Y++ G ++ RR+++
Sbjct: 157 NEAIEKKIKSKNEDISDDDLKTQVNRELLKISAEDTFKALLKEYEIPNGYSLEEQRRFMI 216
Query: 121 I 121
I
Sbjct: 217 I 217
>gi|27734520|sp|Q8ZWI0.2|RS3_PYRAE RecName: Full=30S ribosomal protein S3
Length = 218
Score = 35.8 bits (81), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++
Sbjct: 24 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNIL 76
>gi|124009903|ref|ZP_01694569.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
gi|123984054|gb|EAY24427.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
Length = 604
Score = 35.8 bits (81), Expect = 5.3, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 67 RELTSVVQKRFKF-PENSVELYAEKVNNRGLCAIAQAESLRYKLLG 111
R++ ++QKR+ F EN++E+Y E+ N+ + + Q SLR KL G
Sbjct: 397 RKVAKILQKRYGFTKENTIEVYDEQATNKNI--LKQLSSLREKLTG 440
>gi|170290796|ref|YP_001737612.1| 30S ribosomal protein S3 [Candidatus Korarchaeum cryptofilum
OPF8]
gi|170174876|gb|ACB07929.1| ribosomal protein S3 [Candidatus Korarchaeum cryptofilum OPF8]
Length = 251
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 38/67 (56%)
Query: 9 RKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRE 68
+KFV +G+ +L+E + + + G+ GVE+ TP+R I + ++G GR +
Sbjct: 11 KKFVQEGIVKYKLHEFMEKISDKAGFHGVEISSTPIRDIITVYVESPGVMIGRGGRTSKR 70
Query: 69 LTSVVQK 75
++ ++++
Sbjct: 71 ISDILKE 77
>gi|390938985|ref|YP_006402723.1| 30S ribosomal protein S3 [Desulfurococcus fermentans DSM 16532]
gi|390192092|gb|AFL67148.1| ribosomal protein S3 [Desulfurococcus fermentans DSM 16532]
Length = 223
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRF 77
++E L + GY+ VE+ TP ++I A ++G G I++L++++Q R
Sbjct: 20 IDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIKKLSTILQNRL 76
>gi|114566687|ref|YP_753841.1| hypothetical protein Swol_1161 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|123027115|sp|Q0AXT4.1|Y1161_SYNWW RecName: Full=UPF0182 protein Swol_1161
gi|114337622|gb|ABI68470.1| protein of unknown function UPF0182 [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 914
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 28 ELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELY 87
E+AE+G+ V+ P R ++ R + GEK + + QK F +P +Y
Sbjct: 441 EVAEEGFPQFFVKDIPPRFSTDLKIERPEIYFGEKTDNY-VIVNTSQKEFDYPAGEKNVY 499
Query: 88 AEKVNNRGLCAIAQAESLRYKLLGGLAVRRYILIISQILSNKA 130
G+ + +S +LL G ++ Y +++S ++N++
Sbjct: 500 TRYEGKDGI----KIKSFARRLLFGWVLKDYKMLLSSDITNES 538
>gi|145591005|ref|YP_001153007.1| 30S ribosomal protein S3 [Pyrobaculum arsenaticum DSM 13514]
gi|145282773|gb|ABP50355.1| SSU ribosomal protein S3P [Pyrobaculum arsenaticum DSM 13514]
Length = 222
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++
Sbjct: 26 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSNIL 78
>gi|172046048|sp|A4WIY8.2|RS3_PYRAR RecName: Full=30S ribosomal protein S3
Length = 220
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
+ E L L++ GY E+ TP+ T I+I A R ++G KG ++E+++++
Sbjct: 24 IKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEVSNIL 76
>gi|374325617|ref|YP_005083814.1| 30S ribosomal protein S3 [Pyrobaculum sp. 1860]
gi|356640883|gb|AET31562.1| 30S ribosomal protein S3P [Pyrobaculum sp. 1860]
Length = 218
Score = 35.4 bits (80), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 21 LNEVLTRELAEDGYSGVEVRVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
+ E L L+ GY E+ TP+ T I+I A R ++G KG ++E+++++
Sbjct: 24 IKEFLEYRLSRYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNIL 76
>gi|291232032|ref|XP_002735964.1| PREDICTED: high density lipoprotein binding protein-like, partial
[Saccoglossus kowalevskii]
Length = 747
Score = 35.4 bits (80), Expect = 8.1, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 40 RVTPVRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRG 95
R + V E II + V+G KG +++ +TS + KFP+ ++ + AE N G
Sbjct: 611 RESQVTVECIIDQKNHRTVMGAKGSKVQAITSEYEVGIKFPDRNMNMNAESNGNNG 666
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.137 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,671,963,047
Number of Sequences: 23463169
Number of extensions: 55026144
Number of successful extensions: 147737
Number of sequences better than 100.0: 910
Number of HSP's better than 100.0 without gapping: 847
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 146830
Number of HSP's gapped (non-prelim): 923
length of query: 137
length of database: 8,064,228,071
effective HSP length: 102
effective length of query: 35
effective length of database: 9,965,952,129
effective search space: 348808324515
effective search space used: 348808324515
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 71 (32.0 bits)