Query 040242
Match_columns 662
No_of_seqs 423 out of 3668
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 06:29:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040242.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/040242hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 4.9E-57 1.1E-61 478.6 26.4 290 341-635 61-355 (361)
2 cd06899 lectin_legume_LecRK_Ar 100.0 5.6E-55 1.2E-59 436.6 25.6 231 21-272 1-235 (236)
3 PF00139 Lectin_legB: Legume l 100.0 1.5E-53 3.3E-58 427.7 20.9 232 20-270 1-236 (236)
4 KOG0192 Tyrosine kinase specif 100.0 2E-45 4.3E-50 387.3 23.0 250 359-631 45-302 (362)
5 KOG0581 Mitogen-activated prot 100.0 9.6E-45 2.1E-49 364.6 16.9 255 345-628 76-335 (364)
6 KOG0575 Polo-like serine/threo 100.0 4.9E-44 1.1E-48 378.9 23.1 253 355-632 18-275 (592)
7 KOG0197 Tyrosine kinases [Sign 100.0 1.7E-44 3.8E-49 378.9 14.6 251 358-632 209-461 (468)
8 KOG0595 Serine/threonine-prote 100.0 5.4E-43 1.2E-47 354.7 21.3 201 355-565 10-218 (429)
9 KOG0591 NIMA (never in mitosis 100.0 9E-44 1.9E-48 343.0 9.1 262 355-632 19-285 (375)
10 KOG0615 Serine/threonine prote 100.0 6.1E-43 1.3E-47 353.5 12.4 253 355-628 172-437 (475)
11 KOG1026 Nerve growth factor re 100.0 4E-42 8.8E-47 377.5 17.3 260 356-633 487-763 (774)
12 KOG0196 Tyrosine kinase, EPH ( 100.0 2.3E-42 5E-47 371.7 10.3 270 345-637 610-896 (996)
13 KOG0593 Predicted protein kina 100.0 2.4E-41 5.1E-46 329.3 14.2 264 355-627 2-283 (396)
14 KOG0598 Ribosomal protein S6 k 100.0 4.3E-41 9.3E-46 338.3 16.3 243 354-620 24-269 (357)
15 cd01951 lectin_L-type legume l 100.0 6.4E-40 1.4E-44 327.1 23.4 205 30-270 13-222 (223)
16 KOG0600 Cdc2-related protein k 100.0 1.1E-40 2.4E-45 345.0 17.1 279 355-643 117-416 (560)
17 KOG0198 MEKK and related serin 100.0 8.3E-41 1.8E-45 342.0 15.7 257 355-631 17-279 (313)
18 KOG0193 Serine/threonine prote 100.0 8.5E-41 1.8E-45 352.3 15.3 263 353-637 390-659 (678)
19 KOG0659 Cdk activating kinase 100.0 7.2E-40 1.6E-44 314.2 18.8 284 355-647 2-301 (318)
20 PLN00113 leucine-rich repeat r 100.0 2.9E-39 6.3E-44 389.9 28.6 268 345-634 683-953 (968)
21 cd05102 PTKc_VEGFR3 Catalytic 100.0 8.7E-40 1.9E-44 347.8 20.4 262 354-632 6-334 (338)
22 KOG0661 MAPK related serine/th 100.0 8.4E-41 1.8E-45 343.5 11.1 264 355-628 10-291 (538)
23 KOG1094 Discoidin domain recep 100.0 5.8E-39 1.2E-43 335.5 24.6 262 356-632 539-804 (807)
24 KOG3653 Transforming growth fa 100.0 7.2E-40 1.6E-44 336.4 17.5 268 355-637 210-508 (534)
25 cd05631 STKc_GRK4 Catalytic do 100.0 3.4E-39 7.3E-44 334.9 20.0 253 356-628 1-261 (285)
26 KOG0583 Serine/threonine prote 100.0 7.7E-39 1.7E-43 340.3 22.0 251 353-628 15-275 (370)
27 cd05064 PTKc_EphR_A10 Catalyti 100.0 6.5E-39 1.4E-43 329.3 20.3 255 355-631 5-264 (266)
28 KOG0582 Ste20-like serine/thre 100.0 8.3E-39 1.8E-43 326.5 20.6 260 355-627 26-292 (516)
29 KOG1095 Protein tyrosine kinas 100.0 1.9E-39 4.1E-44 368.6 17.5 260 355-632 692-961 (1025)
30 KOG0597 Serine-threonine prote 100.0 7.7E-40 1.7E-44 341.0 13.1 273 355-653 2-281 (808)
31 KOG0592 3-phosphoinositide-dep 100.0 2.3E-39 4.9E-44 337.8 16.4 253 353-629 71-339 (604)
32 KOG4721 Serine/threonine prote 100.0 4.8E-40 1E-44 342.1 10.7 240 359-632 128-368 (904)
33 cd07848 STKc_CDKL5 Catalytic d 100.0 2E-38 4.3E-43 329.0 22.9 266 355-628 1-284 (287)
34 KOG0578 p21-activated serine/t 100.0 2.9E-39 6.4E-44 340.0 16.6 251 355-628 273-523 (550)
35 cd05096 PTKc_DDR1 Catalytic do 100.0 2.5E-38 5.3E-43 331.5 23.6 266 355-631 5-304 (304)
36 PHA02988 hypothetical protein; 100.0 2.4E-38 5.3E-43 328.3 22.2 246 360-632 25-279 (283)
37 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.8E-38 4E-43 337.0 21.2 253 355-628 1-257 (333)
38 cd05052 PTKc_Abl Catalytic dom 100.0 1.8E-38 3.9E-43 325.2 20.3 255 355-631 6-261 (263)
39 KOG0194 Protein tyrosine kinas 100.0 3.1E-39 6.8E-44 344.6 14.9 259 358-639 160-427 (474)
40 cd05048 PTKc_Ror Catalytic Dom 100.0 2.2E-38 4.8E-43 327.9 20.3 259 355-631 5-282 (283)
41 cd05612 STKc_PRKX_like Catalyt 100.0 8.4E-39 1.8E-43 333.1 17.2 246 355-628 1-254 (291)
42 PF07714 Pkinase_Tyr: Protein 100.0 6.9E-39 1.5E-43 327.9 16.2 250 359-629 3-259 (259)
43 cd05571 STKc_PKB Catalytic dom 100.0 1.1E-38 2.4E-43 337.2 18.2 243 361-628 1-251 (323)
44 cd05104 PTKc_Kit Catalytic dom 100.0 2.5E-38 5.4E-43 341.3 20.6 261 355-632 35-374 (375)
45 cd06649 PKc_MEK2 Catalytic dom 100.0 1.2E-37 2.5E-42 330.6 24.8 262 355-629 5-302 (331)
46 PTZ00263 protein kinase A cata 100.0 1.5E-38 3.3E-43 337.1 17.8 246 355-628 18-271 (329)
47 cd05595 STKc_PKB_beta Catalyti 100.0 3.6E-38 7.7E-43 333.4 20.4 243 361-628 1-251 (323)
48 cd05114 PTKc_Tec_Rlk Catalytic 100.0 5E-38 1.1E-42 320.5 20.7 252 355-630 4-256 (256)
49 cd05593 STKc_PKB_gamma Catalyt 100.0 4.4E-38 9.6E-43 333.3 20.6 243 361-628 1-251 (328)
50 KOG0605 NDR and related serine 100.0 5.3E-38 1.2E-42 328.0 20.5 253 353-627 139-444 (550)
51 KOG0616 cAMP-dependent protein 100.0 4.5E-38 9.7E-43 306.0 18.1 237 355-619 44-283 (355)
52 KOG0588 Serine/threonine prote 100.0 1.4E-38 2.9E-43 338.2 15.6 256 357-638 14-275 (786)
53 cd05072 PTKc_Lyn Catalytic dom 100.0 5.2E-38 1.1E-42 321.1 19.5 254 355-631 6-260 (261)
54 cd07871 STKc_PCTAIRE3 Catalyti 100.0 6.6E-38 1.4E-42 325.8 20.4 265 355-628 5-285 (288)
55 PLN00034 mitogen-activated pro 100.0 1.5E-37 3.3E-42 332.7 23.7 248 356-628 75-328 (353)
56 PTZ00426 cAMP-dependent protei 100.0 5.7E-38 1.2E-42 334.0 20.2 246 355-628 30-284 (340)
57 cd05106 PTKc_CSF-1R Catalytic 100.0 3.9E-38 8.4E-43 339.6 18.4 261 355-632 38-372 (374)
58 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.9E-38 1.1E-42 321.2 18.1 256 353-631 4-260 (261)
59 cd05068 PTKc_Frk_like Catalyti 100.0 1.1E-37 2.4E-42 318.9 20.5 255 354-631 5-260 (261)
60 PTZ00267 NIMA-related protein 100.0 1.2E-37 2.6E-42 346.2 22.5 253 356-627 68-322 (478)
61 cd07862 STKc_CDK6 Catalytic do 100.0 1E-37 2.2E-42 324.3 20.4 263 355-627 1-286 (290)
62 cd05605 STKc_GRK4_like Catalyt 100.0 1.1E-37 2.5E-42 323.5 20.6 253 356-628 1-261 (285)
63 cd05033 PTKc_EphR Catalytic do 100.0 1.9E-37 4.1E-42 318.1 21.7 256 355-632 4-265 (266)
64 cd05108 PTKc_EGFR Catalytic do 100.0 1.2E-37 2.7E-42 328.1 20.7 257 355-634 7-270 (316)
65 PHA03212 serine/threonine kina 100.0 3.3E-37 7.1E-42 333.9 24.4 259 355-628 92-376 (391)
66 cd05596 STKc_ROCK Catalytic do 100.0 9.7E-38 2.1E-42 336.2 20.0 256 352-628 40-304 (370)
67 cd05585 STKc_YPK1_like Catalyt 100.0 5.1E-38 1.1E-42 330.5 17.4 241 363-628 1-247 (312)
68 cd05084 PTKc_Fes Catalytic dom 100.0 1.7E-37 3.7E-42 315.6 20.1 248 361-630 1-251 (252)
69 cd08529 STKc_FA2-like Catalyti 100.0 2.9E-37 6.3E-42 314.2 21.6 251 356-628 1-253 (256)
70 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.8E-37 3.9E-42 329.7 20.8 261 356-628 1-290 (338)
71 cd05573 STKc_ROCK_NDR_like Cat 100.0 9.8E-38 2.1E-42 333.5 18.8 253 355-628 1-285 (350)
72 cd05601 STKc_CRIK Catalytic do 100.0 4.6E-38 9.9E-43 333.5 16.1 254 355-628 1-263 (330)
73 cd05049 PTKc_Trk Catalytic dom 100.0 2.2E-37 4.9E-42 319.7 20.8 259 355-631 5-280 (280)
74 KOG0201 Serine/threonine prote 100.0 1.3E-38 2.8E-43 325.1 11.3 250 355-628 13-263 (467)
75 cd05062 PTKc_IGF-1R Catalytic 100.0 2.9E-37 6.2E-42 318.8 21.6 261 353-631 4-277 (277)
76 cd05094 PTKc_TrkC Catalytic do 100.0 2.9E-37 6.2E-42 321.3 21.4 263 355-635 5-285 (291)
77 cd07869 STKc_PFTAIRE1 Catalyti 100.0 3.9E-37 8.5E-42 322.3 22.6 263 354-627 4-287 (303)
78 PTZ00283 serine/threonine prot 100.0 1.8E-37 3.8E-42 345.5 21.0 261 349-628 26-297 (496)
79 cd05589 STKc_PKN Catalytic dom 100.0 2.2E-37 4.7E-42 327.5 20.7 246 357-628 1-257 (324)
80 cd06650 PKc_MEK1 Catalytic dom 100.0 5.8E-37 1.2E-41 325.5 23.8 260 355-628 5-299 (333)
81 KOG0663 Protein kinase PITSLRE 100.0 1.7E-37 3.6E-42 306.3 18.0 273 355-641 76-375 (419)
82 KOG4278 Protein tyrosine kinas 100.0 1.9E-38 4E-43 332.5 11.8 252 357-630 269-521 (1157)
83 cd05599 STKc_NDR_like Catalyti 100.0 2.9E-37 6.4E-42 331.8 21.4 253 355-628 1-296 (364)
84 cd06625 STKc_MEKK3_like Cataly 100.0 6.1E-37 1.3E-41 313.3 22.7 252 355-628 2-260 (263)
85 cd05592 STKc_nPKC_theta_delta 100.0 4.9E-37 1.1E-41 323.7 22.6 242 361-627 1-247 (316)
86 cd07853 STKc_NLK Catalytic dom 100.0 3.3E-37 7.1E-42 332.5 21.7 264 356-628 1-288 (372)
87 cd05608 STKc_GRK1 Catalytic do 100.0 2.5E-37 5.5E-42 320.0 20.0 249 363-628 1-257 (280)
88 KOG0585 Ca2+/calmodulin-depend 100.0 1.8E-37 4E-42 318.4 18.5 260 352-634 94-378 (576)
89 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.4E-37 7.4E-42 314.6 20.5 252 355-630 4-256 (256)
90 cd05626 STKc_LATS2 Catalytic d 100.0 5.6E-37 1.2E-41 331.7 23.4 252 356-628 2-305 (381)
91 cd08228 STKc_Nek6 Catalytic do 100.0 5.7E-37 1.2E-41 314.4 22.2 261 355-632 2-265 (267)
92 cd05105 PTKc_PDGFR_alpha Catal 100.0 3.1E-37 6.7E-42 334.5 21.3 263 354-633 36-398 (400)
93 cd05093 PTKc_TrkB Catalytic do 100.0 4.1E-37 8.9E-42 319.7 21.3 261 355-633 5-280 (288)
94 KOG1989 ARK protein kinase fam 100.0 1.9E-37 4.1E-42 342.4 19.7 262 355-639 37-322 (738)
95 cd05607 STKc_GRK7 Catalytic do 100.0 3.1E-37 6.7E-42 318.9 19.8 254 363-635 1-257 (277)
96 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 2.4E-37 5.3E-42 320.4 19.0 263 355-632 4-283 (284)
97 cd05594 STKc_PKB_alpha Catalyt 100.0 8.8E-38 1.9E-42 330.6 16.0 244 361-628 1-252 (325)
98 cd05111 PTK_HER3 Pseudokinase 100.0 4.3E-37 9.2E-42 318.1 20.7 257 355-634 7-270 (279)
99 cd05621 STKc_ROCK2 Catalytic d 100.0 4.2E-37 9.2E-42 331.0 21.2 259 349-628 37-304 (370)
100 cd05036 PTKc_ALK_LTK Catalytic 100.0 3.8E-37 8.2E-42 318.0 19.7 260 353-630 4-276 (277)
101 KOG0580 Serine/threonine prote 100.0 3.4E-38 7.4E-43 298.6 10.7 250 354-628 21-273 (281)
102 cd06624 STKc_ASK Catalytic dom 100.0 9E-37 2E-41 313.4 22.3 259 349-628 2-265 (268)
103 cd06646 STKc_MAP4K5 Catalytic 100.0 6.2E-37 1.3E-41 314.3 21.0 255 355-629 9-266 (267)
104 PF00069 Pkinase: Protein kina 100.0 7.6E-37 1.6E-41 311.7 21.4 254 357-628 1-257 (260)
105 cd05628 STKc_NDR1 Catalytic do 100.0 1.1E-36 2.5E-41 327.2 23.8 203 355-565 1-240 (363)
106 cd05614 STKc_MSK2_N N-terminal 100.0 2.8E-37 6.1E-42 327.7 18.8 253 356-628 1-267 (332)
107 cd05059 PTKc_Tec_like Catalyti 100.0 4.2E-37 9.2E-42 313.7 19.2 251 356-630 5-256 (256)
108 cd05090 PTKc_Ror1 Catalytic do 100.0 5.5E-37 1.2E-41 317.7 20.3 259 355-631 5-282 (283)
109 cd05063 PTKc_EphR_A2 Catalytic 100.0 6.8E-37 1.5E-41 314.2 20.8 256 355-632 5-267 (268)
110 cd05618 STKc_aPKC_iota Catalyt 100.0 4.7E-37 1E-41 325.6 20.2 250 361-628 1-262 (329)
111 cd05590 STKc_nPKC_eta Catalyti 100.0 2.6E-37 5.7E-42 326.3 18.2 243 361-628 1-253 (320)
112 cd05587 STKc_cPKC Catalytic do 100.0 3.8E-37 8.3E-42 325.6 19.4 247 356-627 1-256 (324)
113 KOG0611 Predicted serine/threo 100.0 7.5E-38 1.6E-42 314.4 13.2 249 355-630 53-305 (668)
114 cd05588 STKc_aPKC Catalytic do 100.0 5.1E-37 1.1E-41 325.4 20.3 250 361-628 1-262 (329)
115 cd08229 STKc_Nek7 Catalytic do 100.0 9E-37 1.9E-41 312.9 21.5 261 355-632 2-265 (267)
116 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6E-37 1.3E-41 313.3 19.9 253 355-631 6-259 (260)
117 cd05054 PTKc_VEGFR Catalytic d 100.0 4.6E-37 1E-41 326.7 19.7 262 355-633 7-334 (337)
118 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.1E-36 4.6E-41 309.8 23.8 261 355-632 2-265 (267)
119 cd05622 STKc_ROCK1 Catalytic d 100.0 6.6E-37 1.4E-41 329.7 21.0 264 345-629 33-305 (371)
120 cd06654 STKc_PAK1 Catalytic do 100.0 1.2E-36 2.5E-41 317.7 21.9 251 355-628 20-270 (296)
121 cd05584 STKc_p70S6K Catalytic 100.0 4.2E-37 9.2E-42 325.2 18.7 243 361-628 2-256 (323)
122 KOG0660 Mitogen-activated prot 100.0 2.9E-37 6.3E-42 309.4 16.4 279 352-639 19-323 (359)
123 cd05591 STKc_nPKC_epsilon Cata 100.0 3.2E-37 6.9E-42 325.8 17.7 243 361-628 1-254 (321)
124 KOG2052 Activin A type IB rece 100.0 6E-37 1.3E-41 312.7 19.0 265 355-636 211-507 (513)
125 cd05619 STKc_nPKC_theta Cataly 100.0 5.4E-37 1.2E-41 323.3 19.4 242 361-627 1-247 (316)
126 cd05045 PTKc_RET Catalytic dom 100.0 8.1E-37 1.7E-41 317.7 20.3 259 356-632 1-286 (290)
127 cd05085 PTKc_Fer Catalytic dom 100.0 1.3E-36 2.7E-41 308.7 21.2 247 361-630 1-249 (250)
128 cd05071 PTKc_Src Catalytic dom 100.0 1E-36 2.2E-41 312.3 20.5 253 355-631 6-259 (262)
129 cd05575 STKc_SGK Catalytic dom 100.0 4.3E-37 9.3E-42 325.1 18.2 238 361-623 1-242 (323)
130 cd05620 STKc_nPKC_delta Cataly 100.0 5E-37 1.1E-41 323.6 18.6 241 361-626 1-246 (316)
131 cd05075 PTKc_Axl Catalytic dom 100.0 1.9E-36 4.1E-41 311.4 22.4 256 358-631 2-270 (272)
132 cd05032 PTKc_InsR_like Catalyt 100.0 1.1E-36 2.3E-41 314.1 20.6 259 355-631 6-277 (277)
133 KOG0694 Serine/threonine prote 100.0 4.5E-37 9.9E-42 329.4 18.3 244 353-622 366-613 (694)
134 cd06637 STKc_TNIK Catalytic do 100.0 8.3E-37 1.8E-41 314.1 19.6 255 352-628 3-269 (272)
135 cd05616 STKc_cPKC_beta Catalyt 100.0 6.3E-37 1.4E-41 323.8 19.1 247 356-627 1-256 (323)
136 cd05035 PTKc_Axl_like Catalyti 100.0 1.9E-36 4.2E-41 311.2 22.1 258 357-632 1-272 (273)
137 KOG0589 Serine/threonine prote 100.0 9.3E-38 2E-42 327.3 12.1 252 355-628 4-258 (426)
138 cd05089 PTKc_Tie1 Catalytic do 100.0 1.1E-36 2.4E-41 318.0 20.3 258 355-632 2-275 (297)
139 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.5E-36 3.3E-41 318.7 21.4 265 355-628 6-286 (309)
140 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.1E-36 2.5E-41 311.2 19.9 253 355-631 6-259 (260)
141 cd05091 PTKc_Ror2 Catalytic do 100.0 1E-36 2.2E-41 315.5 19.6 258 356-631 6-282 (283)
142 cd05570 STKc_PKC Catalytic dom 100.0 7E-37 1.5E-41 322.8 18.7 243 361-628 1-252 (318)
143 cd05051 PTKc_DDR Catalytic dom 100.0 1.9E-36 4E-41 315.6 21.6 266 355-631 5-296 (296)
144 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.1E-36 2.5E-41 315.3 19.7 265 358-632 7-281 (283)
145 cd05598 STKc_LATS Catalytic do 100.0 8.8E-37 1.9E-41 329.6 19.6 252 356-628 2-301 (376)
146 cd05053 PTKc_FGFR Catalytic do 100.0 6.2E-37 1.4E-41 318.8 17.7 262 353-632 10-291 (293)
147 cd05097 PTKc_DDR_like Catalyti 100.0 3.2E-36 6.9E-41 314.1 23.0 266 355-631 5-295 (295)
148 cd07876 STKc_JNK2 Catalytic do 100.0 4.9E-36 1.1E-40 321.8 24.9 263 353-628 19-315 (359)
149 cd05092 PTKc_TrkA Catalytic do 100.0 2E-36 4.3E-41 313.2 21.1 259 355-631 5-280 (280)
150 cd05604 STKc_SGK3 Catalytic do 100.0 4.8E-37 1E-41 325.0 16.9 244 361-629 1-248 (325)
151 cd06612 STKc_MST1_2 Catalytic 100.0 2.6E-36 5.6E-41 307.2 21.4 251 355-628 3-253 (256)
152 cd06619 PKc_MKK5 Catalytic dom 100.0 3.7E-36 8.1E-41 311.0 22.9 251 355-628 1-253 (279)
153 cd05039 PTKc_Csk_like Catalyti 100.0 2.2E-36 4.8E-41 308.2 20.8 249 355-631 6-255 (256)
154 cd05603 STKc_SGK2 Catalytic do 100.0 8.6E-37 1.9E-41 322.5 18.3 238 361-623 1-242 (321)
155 cd05116 PTKc_Syk Catalytic dom 100.0 2E-36 4.3E-41 309.0 20.4 246 362-631 2-254 (257)
156 cd05632 STKc_GRK5 Catalytic do 100.0 2.6E-36 5.6E-41 313.3 21.6 252 357-628 2-261 (285)
157 cd05069 PTKc_Yes Catalytic dom 100.0 3.7E-36 8E-41 307.5 22.4 253 355-631 6-259 (260)
158 cd05629 STKc_NDR_like_fungal C 100.0 8.8E-37 1.9E-41 329.8 18.8 253 355-628 1-305 (377)
159 KOG2345 Serine/threonine prote 100.0 2.3E-37 5E-42 294.2 12.4 264 353-632 19-300 (302)
160 cd05625 STKc_LATS1 Catalytic d 100.0 2.2E-36 4.8E-41 327.2 21.8 252 356-628 2-305 (382)
161 cd05597 STKc_DMPK_like Catalyt 100.0 4.1E-36 9E-41 318.7 23.4 256 355-628 1-266 (331)
162 cd05109 PTKc_HER2 Catalytic do 100.0 2.1E-36 4.6E-41 312.7 20.6 259 355-636 7-272 (279)
163 cd06613 STKc_MAP4K3_like Catal 100.0 3.8E-36 8.2E-41 307.1 22.2 255 355-628 3-260 (262)
164 cd08219 STKc_Nek3 Catalytic do 100.0 2.7E-36 5.9E-41 307.3 20.9 251 356-628 1-252 (255)
165 cd05088 PTKc_Tie2 Catalytic do 100.0 1.1E-36 2.4E-41 318.9 18.5 257 355-631 7-279 (303)
166 cd05055 PTKc_PDGFR Catalytic d 100.0 3.3E-36 7.1E-41 315.3 22.0 257 355-631 35-300 (302)
167 cd05034 PTKc_Src_like Catalyti 100.0 2.1E-36 4.5E-41 309.1 20.0 254 355-631 6-260 (261)
168 cd05582 STKc_RSK_N N-terminal 100.0 1E-36 2.2E-41 321.5 18.1 239 361-624 2-245 (318)
169 cd05630 STKc_GRK6 Catalytic do 100.0 1.8E-36 3.9E-41 314.5 19.6 250 357-627 2-260 (285)
170 cd05065 PTKc_EphR_B Catalytic 100.0 2E-36 4.3E-41 311.0 19.8 255 356-632 5-268 (269)
171 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.1E-36 4.5E-41 320.4 20.4 250 361-628 1-260 (327)
172 cd06655 STKc_PAK2 Catalytic do 100.0 3.2E-36 6.8E-41 314.5 21.5 261 355-638 19-281 (296)
173 cd06656 STKc_PAK3 Catalytic do 100.0 4.3E-36 9.4E-41 313.6 22.5 260 355-637 19-280 (297)
174 cd05066 PTKc_EphR_A Catalytic 100.0 2.4E-36 5.2E-41 310.1 20.2 255 355-631 4-265 (267)
175 cd05061 PTKc_InsR Catalytic do 100.0 3.9E-36 8.4E-41 312.4 21.9 262 353-632 4-278 (288)
176 cd05050 PTKc_Musk Catalytic do 100.0 2.8E-36 6E-41 313.2 20.8 260 354-631 4-288 (288)
177 PTZ00284 protein kinase; Provi 100.0 3.1E-36 6.8E-41 334.5 22.3 286 350-648 124-464 (467)
178 cd05115 PTKc_Zap-70 Catalytic 100.0 3.4E-36 7.5E-41 307.5 20.8 247 362-631 2-254 (257)
179 cd07874 STKc_JNK3 Catalytic do 100.0 3.5E-36 7.6E-41 322.4 21.9 263 353-628 15-311 (355)
180 cd08223 STKc_Nek4 Catalytic do 100.0 5.8E-36 1.2E-40 305.0 22.3 251 356-628 1-254 (257)
181 cd06643 STKc_SLK Catalytic dom 100.0 4.5E-36 9.8E-41 310.7 21.8 252 357-629 7-263 (282)
182 cd06615 PKc_MEK Catalytic doma 100.0 4.7E-36 1E-40 315.0 22.1 260 355-629 1-288 (308)
183 cd05624 STKc_MRCK_beta Catalyt 100.0 2.2E-36 4.8E-41 320.8 19.8 256 355-628 1-266 (331)
184 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.6E-36 5.6E-41 327.2 20.6 261 355-632 37-399 (401)
185 cd05602 STKc_SGK1 Catalytic do 100.0 1.3E-36 2.8E-41 321.7 17.8 247 361-632 1-251 (325)
186 KOG4279 Serine/threonine prote 100.0 4.7E-37 1E-41 325.6 14.1 252 360-632 580-838 (1226)
187 cd06644 STKc_STK10_LOK Catalyt 100.0 7.2E-36 1.6E-40 310.9 22.8 253 355-628 12-269 (292)
188 cd08221 STKc_Nek9 Catalytic do 100.0 6.3E-36 1.4E-40 304.7 21.9 252 356-629 1-254 (256)
189 cd05615 STKc_cPKC_alpha Cataly 100.0 2.2E-36 4.7E-41 319.7 19.1 242 356-622 1-246 (323)
190 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.1E-36 8.8E-41 319.2 21.2 261 355-633 12-294 (334)
191 cd08218 STKc_Nek1 Catalytic do 100.0 4.7E-36 1E-40 305.6 20.7 251 356-628 1-253 (256)
192 cd06645 STKc_MAP4K3 Catalytic 100.0 3.5E-36 7.5E-41 308.7 19.9 254 355-628 9-265 (267)
193 PTZ00036 glycogen synthase kin 100.0 3E-36 6.4E-41 331.5 20.5 262 353-628 64-351 (440)
194 cd05095 PTKc_DDR2 Catalytic do 100.0 4.7E-36 1E-40 313.0 21.0 266 355-631 5-296 (296)
195 cd05060 PTKc_Syk_like Catalyti 100.0 5.4E-36 1.2E-40 305.6 20.9 248 361-632 1-255 (257)
196 cd05047 PTKc_Tie Catalytic dom 100.0 4E-36 8.8E-41 309.1 20.1 252 361-632 1-268 (270)
197 cd07863 STKc_CDK4 Catalytic do 100.0 4.3E-36 9.2E-41 311.6 20.3 264 356-628 1-285 (288)
198 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2E-36 4.4E-41 313.7 17.8 261 355-631 4-282 (284)
199 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.1E-36 6.8E-41 311.0 19.1 248 356-628 5-253 (277)
200 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 8.4E-36 1.8E-40 306.5 22.1 256 361-630 1-268 (269)
201 cd06609 STKc_MST3_like Catalyt 100.0 7E-36 1.5E-40 307.8 21.4 250 355-628 1-251 (274)
202 cd00192 PTKc Catalytic domain 100.0 8.2E-36 1.8E-40 303.7 21.7 252 361-630 1-262 (262)
203 cd05623 STKc_MRCK_alpha Cataly 100.0 3.2E-36 7E-41 319.7 19.4 256 355-628 1-266 (332)
204 cd05073 PTKc_Hck Catalytic dom 100.0 6E-36 1.3E-40 306.0 20.6 253 355-631 6-259 (260)
205 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 8.9E-36 1.9E-40 305.4 21.8 241 361-630 1-262 (262)
206 cd07875 STKc_JNK1 Catalytic do 100.0 5.6E-36 1.2E-40 321.9 21.3 263 353-628 22-318 (364)
207 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.2E-36 1.1E-40 313.4 20.4 262 355-628 6-286 (301)
208 cd06638 STKc_myosinIIIA Cataly 100.0 5.1E-36 1.1E-40 310.7 20.1 266 345-629 8-284 (286)
209 cd05112 PTKc_Itk Catalytic dom 100.0 4.8E-36 1E-40 305.6 19.5 252 355-630 4-256 (256)
210 cd06611 STKc_SLK_like Catalyti 100.0 5.2E-36 1.1E-40 309.8 20.0 254 354-628 4-262 (280)
211 PRK13184 pknD serine/threonine 100.0 6.8E-36 1.5E-40 342.3 22.8 261 355-631 2-289 (932)
212 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.9E-36 1.3E-40 308.9 20.2 240 362-630 2-274 (274)
213 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 8.8E-36 1.9E-40 308.9 21.6 257 355-629 5-267 (284)
214 cd07861 STKc_CDK1_euk Catalyti 100.0 5.9E-36 1.3E-40 309.9 20.2 264 356-628 1-282 (285)
215 cd05101 PTKc_FGFR2 Catalytic d 100.0 5.5E-36 1.2E-40 313.7 20.2 262 355-634 15-298 (304)
216 cd05058 PTKc_Met_Ron Catalytic 100.0 1E-35 2.2E-40 304.2 21.7 250 361-632 1-259 (262)
217 cd05098 PTKc_FGFR1 Catalytic d 100.0 4E-36 8.6E-41 315.3 19.1 260 355-632 18-299 (307)
218 cd05082 PTKc_Csk Catalytic dom 100.0 6.7E-36 1.4E-40 304.8 20.2 248 355-631 6-255 (256)
219 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 6.7E-36 1.4E-40 309.9 20.4 254 356-628 2-262 (286)
220 cd06628 STKc_MAPKKK_Byr2_like 100.0 9.3E-36 2E-40 305.4 21.2 250 356-628 1-264 (267)
221 cd06640 STKc_MST4 Catalytic do 100.0 1.4E-35 3E-40 306.4 22.5 248 356-628 5-253 (277)
222 cd05040 PTKc_Ack_like Catalyti 100.0 9.4E-36 2E-40 303.6 21.0 249 361-630 1-256 (257)
223 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 3.2E-36 7E-41 311.4 17.8 262 355-632 4-283 (284)
224 KOG0658 Glycogen synthase kina 100.0 6.8E-37 1.5E-41 307.3 12.1 263 355-628 24-306 (364)
225 cd06651 STKc_MEKK3 Catalytic d 100.0 1.7E-35 3.7E-40 303.7 22.8 251 355-628 2-261 (266)
226 PHA03209 serine/threonine kina 100.0 1.1E-35 2.5E-40 318.6 22.3 194 353-562 64-257 (357)
227 cd07832 STKc_CCRK Catalytic do 100.0 1E-35 2.2E-40 308.2 21.1 262 356-628 1-282 (286)
228 cd05042 PTKc_Aatyk Catalytic d 100.0 9.8E-36 2.1E-40 305.8 20.9 255 362-630 2-268 (269)
229 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.3E-36 7.2E-41 307.6 17.1 241 361-630 1-258 (258)
230 cd05103 PTKc_VEGFR2 Catalytic 100.0 8.8E-36 1.9E-40 317.8 20.8 261 355-632 7-339 (343)
231 cd06632 STKc_MEKK1_plant Catal 100.0 1.3E-35 2.9E-40 302.1 21.3 249 356-628 1-255 (258)
232 cd05056 PTKc_FAK Catalytic dom 100.0 1.2E-35 2.6E-40 305.4 21.1 255 355-632 6-265 (270)
233 cd06639 STKc_myosinIIIB Cataly 100.0 1E-35 2.2E-40 309.4 20.7 265 345-628 12-287 (291)
234 cd05627 STKc_NDR2 Catalytic do 100.0 3.6E-36 7.7E-41 323.0 17.4 253 355-628 1-293 (360)
235 cd07841 STKc_CDK7 Catalytic do 100.0 1.8E-35 4E-40 308.5 22.3 262 356-628 1-282 (298)
236 cd05043 PTK_Ryk Pseudokinase d 100.0 1E-35 2.2E-40 307.7 20.0 261 354-632 5-276 (280)
237 cd05041 PTKc_Fes_like Catalyti 100.0 1.4E-35 3E-40 301.2 20.6 247 361-630 1-250 (251)
238 cd08217 STKc_Nek2 Catalytic do 100.0 1.3E-35 2.8E-40 303.0 20.5 256 356-628 1-262 (265)
239 KOG0594 Protein kinase PCTAIRE 100.0 4.8E-36 1E-40 301.9 16.6 268 355-628 11-302 (323)
240 cd05057 PTKc_EGFR_like Catalyt 100.0 1.4E-35 3E-40 306.5 20.6 257 355-634 7-270 (279)
241 cd05046 PTK_CCK4 Pseudokinase 100.0 1.5E-35 3.3E-40 305.4 20.8 260 355-631 5-275 (275)
242 cd05574 STKc_phototropin_like 100.0 3.5E-35 7.5E-40 309.3 23.8 252 355-627 1-288 (316)
243 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.4E-35 5.2E-40 310.4 22.5 260 355-632 12-293 (314)
244 cd08220 STKc_Nek8 Catalytic do 100.0 2E-35 4.2E-40 300.7 21.1 250 356-628 1-253 (256)
245 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.2E-35 2.7E-40 302.8 19.6 239 361-630 1-259 (259)
246 cd07833 STKc_CDKL Catalytic do 100.0 1.2E-35 2.5E-40 308.0 19.8 266 355-628 1-285 (288)
247 smart00219 TyrKc Tyrosine kina 100.0 1.6E-35 3.4E-40 301.4 20.3 252 357-629 1-258 (258)
248 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.5E-35 3.2E-40 306.9 20.3 265 355-628 1-283 (286)
249 cd05044 PTKc_c-ros Catalytic d 100.0 9.1E-36 2E-40 305.8 18.5 252 361-630 1-268 (269)
250 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.8E-35 6E-40 301.4 21.9 257 355-628 1-264 (267)
251 cd08528 STKc_Nek10 Catalytic d 100.0 2.4E-35 5.2E-40 302.8 21.4 256 356-630 1-268 (269)
252 cd06626 STKc_MEKK4 Catalytic d 100.0 3.1E-35 6.8E-40 300.6 22.2 252 356-627 1-260 (264)
253 KOG0599 Phosphorylase kinase g 100.0 1.7E-36 3.6E-41 291.2 11.7 252 355-628 17-283 (411)
254 cd05110 PTKc_HER4 Catalytic do 100.0 1.6E-35 3.4E-40 310.2 20.0 256 355-633 7-269 (303)
255 PTZ00266 NIMA-related protein 100.0 1.8E-35 3.9E-40 340.0 22.2 258 352-627 10-294 (1021)
256 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.7E-35 3.7E-40 306.3 19.9 262 345-628 6-279 (282)
257 cd06658 STKc_PAK5 Catalytic do 100.0 1.6E-35 3.5E-40 308.6 19.8 247 359-628 26-272 (292)
258 cd06652 STKc_MEKK2 Catalytic d 100.0 4.8E-35 1E-39 300.0 23.1 251 355-628 2-261 (265)
259 PHA03211 serine/threonine kina 100.0 2.1E-35 4.6E-40 324.2 21.7 261 354-628 168-455 (461)
260 cd07846 STKc_CDKL2_3 Catalytic 100.0 9.7E-36 2.1E-40 308.5 17.9 265 355-628 1-283 (286)
261 cd08227 PK_STRAD_alpha Pseudok 100.0 3E-35 6.5E-40 311.5 22.0 262 359-628 2-307 (327)
262 cd07860 STKc_CDK2_3 Catalytic 100.0 1.6E-35 3.4E-40 306.7 19.2 263 356-628 1-281 (284)
263 cd05609 STKc_MAST Catalytic do 100.0 4.7E-35 1E-39 306.8 22.9 256 355-631 1-273 (305)
264 cd06629 STKc_MAPKKK_Bck1_like 100.0 3.3E-35 7.2E-40 302.3 21.2 255 356-628 2-269 (272)
265 cd07868 STKc_CDK8 Catalytic do 100.0 2.3E-35 4.9E-40 310.8 20.2 199 360-564 6-219 (317)
266 cd06631 STKc_YSK4 Catalytic do 100.0 4.7E-35 1E-39 300.0 21.9 250 356-627 1-261 (265)
267 cd05083 PTKc_Chk Catalytic dom 100.0 2.2E-35 4.7E-40 300.7 19.1 248 355-632 6-254 (254)
268 KOG0032 Ca2+/calmodulin-depend 100.0 4.4E-35 9.5E-40 311.4 22.1 251 354-628 34-293 (382)
269 cd06647 STKc_PAK_I Catalytic d 100.0 5.5E-35 1.2E-39 304.6 22.4 263 355-640 19-283 (293)
270 cd06659 STKc_PAK6 Catalytic do 100.0 2E-35 4.3E-40 308.6 19.1 247 359-628 25-271 (297)
271 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 9.1E-35 2E-39 301.9 23.9 261 355-628 1-266 (287)
272 cd06630 STKc_MEKK1 Catalytic d 100.0 6.6E-35 1.4E-39 299.1 22.6 254 356-628 1-264 (268)
273 cd07870 STKc_PFTAIRE2 Catalyti 100.0 4E-35 8.7E-40 305.0 21.1 265 353-628 3-288 (291)
274 cd05586 STKc_Sck1_like Catalyt 100.0 6.4E-36 1.4E-40 317.1 15.1 241 363-627 1-252 (330)
275 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.2E-35 4.9E-40 314.6 19.3 259 352-628 12-298 (343)
276 cd08225 STKc_Nek5 Catalytic do 100.0 2.4E-35 5.2E-40 300.2 18.7 251 356-628 1-254 (257)
277 cd07867 STKc_CDC2L6 Catalytic 100.0 3.3E-35 7.2E-40 309.3 20.1 199 360-564 6-219 (317)
278 cd07839 STKc_CDK5 Catalytic do 100.0 2.7E-35 5.8E-40 305.0 18.9 262 356-628 1-281 (284)
279 cd06607 STKc_TAO Catalytic dom 100.0 8.3E-35 1.8E-39 305.3 22.9 249 354-629 14-268 (307)
280 cd06608 STKc_myosinIII_like Ca 100.0 3.5E-35 7.5E-40 301.8 19.2 258 352-628 3-272 (275)
281 cd06623 PKc_MAPKK_plant_like C 100.0 1.2E-34 2.7E-39 296.0 22.9 254 355-628 1-256 (264)
282 cd06648 STKc_PAK_II Catalytic 100.0 6E-35 1.3E-39 303.0 20.9 250 356-628 20-269 (285)
283 cd07840 STKc_CDK9_like Catalyt 100.0 5.5E-35 1.2E-39 302.5 20.3 261 357-628 1-284 (287)
284 PHA03207 serine/threonine kina 100.0 4.8E-35 1E-39 317.7 20.8 259 355-628 92-375 (392)
285 cd06605 PKc_MAPKK Catalytic do 100.0 3.4E-35 7.4E-40 300.7 18.5 255 356-628 2-257 (265)
286 cd06641 STKc_MST3 Catalytic do 100.0 9.2E-35 2E-39 300.2 21.8 247 357-628 6-253 (277)
287 cd05580 STKc_PKA Catalytic dom 100.0 5.3E-35 1.2E-39 304.1 20.1 245 355-627 1-253 (290)
288 cd06617 PKc_MKK3_6 Catalytic d 100.0 5.9E-35 1.3E-39 302.1 20.2 254 355-627 1-260 (283)
289 cd07835 STKc_CDK1_like Catalyt 100.0 4.8E-35 1E-39 302.9 19.5 262 357-628 1-280 (283)
290 cd06917 STKc_NAK1_like Catalyt 100.0 1.1E-34 2.3E-39 299.4 21.8 249 356-628 2-255 (277)
291 cd07842 STKc_CDK8_like Catalyt 100.0 6.1E-35 1.3E-39 307.0 20.3 269 356-628 1-313 (316)
292 cd07844 STKc_PCTAIRE_like Cata 100.0 6.8E-35 1.5E-39 303.2 20.4 263 355-628 5-288 (291)
293 cd05577 STKc_GRK Catalytic dom 100.0 5.6E-35 1.2E-39 301.8 19.2 250 363-632 1-254 (277)
294 KOG0199 ACK and related non-re 100.0 7.8E-36 1.7E-40 317.3 12.9 261 358-641 113-382 (1039)
295 cd05122 PKc_STE Catalytic doma 100.0 1.8E-34 3.8E-39 291.8 22.3 251 356-628 1-251 (253)
296 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.5E-34 5.4E-39 295.5 23.5 255 361-630 1-267 (268)
297 KOG0667 Dual-specificity tyros 100.0 3.1E-35 6.8E-40 315.4 17.3 261 356-628 187-502 (586)
298 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.4E-34 3E-39 297.7 21.1 258 357-632 1-272 (273)
299 cd06635 STKc_TAO1 Catalytic do 100.0 2.4E-34 5.3E-39 303.2 23.2 256 357-639 27-288 (317)
300 cd07836 STKc_Pho85 Catalytic d 100.0 9.3E-35 2E-39 300.8 19.7 263 356-628 1-281 (284)
301 KOG0033 Ca2+/calmodulin-depend 100.0 6.3E-37 1.4E-41 290.1 2.8 253 354-628 10-267 (355)
302 cd07849 STKc_ERK1_2_like Catal 100.0 7.8E-35 1.7E-39 309.6 19.1 262 354-628 4-292 (336)
303 cd07843 STKc_CDC2L1 Catalytic 100.0 1.6E-34 3.5E-39 300.7 21.1 265 355-628 5-290 (293)
304 cd06616 PKc_MKK4 Catalytic dom 100.0 9.1E-35 2E-39 301.7 18.9 257 356-628 5-267 (288)
305 cd06606 STKc_MAPKKK Catalytic 100.0 3.3E-34 7.1E-39 291.1 22.6 252 356-628 1-257 (260)
306 cd06614 STKc_PAK Catalytic dom 100.0 2E-34 4.2E-39 299.0 21.4 255 352-628 16-270 (286)
307 KOG4257 Focal adhesion tyrosin 100.0 3.1E-35 6.8E-40 309.1 15.4 251 356-630 390-647 (974)
308 cd07837 STKc_CdkB_plant Cataly 100.0 1.3E-34 2.8E-39 301.5 19.9 266 355-628 1-291 (295)
309 cd05578 STKc_Yank1 Catalytic d 100.0 7.1E-35 1.5E-39 297.4 17.5 248 356-626 1-253 (258)
310 cd07864 STKc_CDK12 Catalytic d 100.0 1.5E-34 3.2E-39 302.2 19.9 265 353-628 5-299 (302)
311 KOG0610 Putative serine/threon 100.0 1.7E-34 3.7E-39 292.9 19.4 266 356-643 78-416 (459)
312 cd07865 STKc_CDK9 Catalytic do 100.0 2.9E-34 6.3E-39 300.8 21.7 266 355-628 12-307 (310)
313 cd07845 STKc_CDK10 Catalytic d 100.0 3.4E-34 7.3E-39 300.9 21.8 278 354-640 6-303 (309)
314 cd07831 STKc_MOK Catalytic dom 100.0 2.7E-34 5.8E-39 296.8 20.5 258 357-628 1-279 (282)
315 cd08530 STKc_CNK2-like Catalyt 100.0 2.8E-34 6.1E-39 292.0 20.0 251 356-628 1-253 (256)
316 cd08215 STKc_Nek Catalytic dom 100.0 4.1E-34 8.9E-39 290.5 21.0 253 356-628 1-255 (258)
317 cd05118 STKc_CMGC Catalytic do 100.0 2.4E-34 5.2E-39 297.2 19.3 260 357-628 1-280 (283)
318 PLN00009 cyclin-dependent kina 100.0 2.6E-34 5.5E-39 299.4 19.5 266 355-628 2-284 (294)
319 cd07879 STKc_p38delta_MAPK13 C 100.0 2.4E-34 5.1E-39 306.7 19.6 273 347-634 3-305 (342)
320 KOG0577 Serine/threonine prote 100.0 2E-35 4.4E-40 308.8 10.8 246 356-628 27-278 (948)
321 cd06657 STKc_PAK4 Catalytic do 100.0 4.6E-34 1E-38 297.6 20.7 246 360-628 25-270 (292)
322 cd07850 STKc_JNK Catalytic dom 100.0 6.1E-34 1.3E-38 304.8 21.9 263 353-628 14-311 (353)
323 cd06627 STKc_Cdc7_like Catalyt 100.0 7E-34 1.5E-38 288.6 21.0 248 356-627 1-250 (254)
324 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.2E-33 2.6E-38 289.6 22.3 251 355-628 2-261 (264)
325 KOG1025 Epidermal growth facto 100.0 4.7E-35 1E-39 316.2 12.1 257 358-637 699-962 (1177)
326 cd07852 STKc_MAPK15 Catalytic 100.0 1.1E-33 2.4E-38 300.9 22.5 264 354-628 6-295 (337)
327 cd05572 STKc_cGK_PKG Catalytic 100.0 6.6E-34 1.4E-38 291.0 20.1 243 363-627 1-251 (262)
328 cd05633 STKc_GRK3 Catalytic do 100.0 7.2E-34 1.6E-38 294.1 20.2 243 362-628 1-255 (279)
329 cd07838 STKc_CDK4_6_like Catal 100.0 1.5E-33 3.3E-38 291.9 22.6 261 357-628 1-284 (287)
330 cd07858 STKc_TEY_MAPK_plant Ca 100.0 4.9E-34 1.1E-38 303.6 18.9 265 354-628 4-291 (337)
331 cd05579 STKc_MAST_like Catalyt 100.0 4.5E-34 9.8E-39 291.6 17.5 246 363-630 1-256 (265)
332 cd06618 PKc_MKK7 Catalytic dom 100.0 1E-33 2.2E-38 295.4 20.2 253 355-628 15-273 (296)
333 KOG0574 STE20-like serine/thre 100.0 6.1E-36 1.3E-40 290.5 3.1 248 357-628 35-283 (502)
334 PHA03210 serine/threonine kina 100.0 4.9E-34 1.1E-38 318.6 18.9 270 354-628 147-454 (501)
335 cd07830 STKc_MAK_like Catalyti 100.0 1.1E-33 2.5E-38 292.5 20.3 263 357-628 1-280 (283)
336 cd07834 STKc_MAPK Catalytic do 100.0 8.4E-34 1.8E-38 300.6 19.0 265 356-632 1-295 (330)
337 cd07866 STKc_BUR1 Catalytic do 100.0 6.4E-34 1.4E-38 298.3 17.8 267 354-628 7-308 (311)
338 KOG4717 Serine/threonine prote 100.0 4.5E-34 9.7E-39 294.6 15.9 249 355-628 18-270 (864)
339 cd05581 STKc_PDK1 Catalytic do 100.0 4.9E-34 1.1E-38 294.3 16.3 249 355-627 1-276 (280)
340 PHA03390 pk1 serine/threonine- 100.0 3E-33 6.5E-38 287.6 21.9 249 349-627 8-261 (267)
341 cd08226 PK_STRAD_beta Pseudoki 100.0 2.6E-33 5.6E-38 296.9 22.0 260 361-628 4-308 (328)
342 cd06634 STKc_TAO2 Catalytic do 100.0 2E-33 4.2E-38 295.1 20.9 248 355-629 15-268 (308)
343 cd07855 STKc_ERK5 Catalytic do 100.0 5.1E-34 1.1E-38 303.0 16.4 266 354-628 4-294 (334)
344 cd05611 STKc_Rim15_like Cataly 100.0 1.8E-33 4E-38 287.3 19.9 244 361-629 2-249 (260)
345 cd05583 STKc_MSK_N N-terminal 100.0 1.7E-33 3.7E-38 292.3 19.0 256 356-631 1-266 (288)
346 cd06633 STKc_TAO3 Catalytic do 100.0 5.2E-33 1.1E-37 292.6 22.9 245 357-628 23-273 (313)
347 cd05613 STKc_MSK1_N N-terminal 100.0 2.3E-33 4.9E-38 291.7 19.9 252 356-627 1-267 (290)
348 KOG0584 Serine/threonine prote 100.0 1.6E-34 3.4E-39 307.2 11.0 249 360-632 45-302 (632)
349 KOG0596 Dual specificity; seri 100.0 1.9E-34 4.1E-39 300.9 11.3 250 355-628 361-627 (677)
350 PHA02882 putative serine/threo 100.0 8.9E-33 1.9E-37 288.2 23.7 256 355-630 12-294 (294)
351 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.4E-33 5.2E-38 299.3 19.8 270 345-628 7-300 (345)
352 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5.2E-33 1.1E-37 294.5 21.7 265 349-628 4-288 (328)
353 KOG0986 G protein-coupled rece 100.0 3.2E-34 6.9E-39 292.7 11.6 249 355-623 185-436 (591)
354 PTZ00024 cyclin-dependent prot 100.0 3E-33 6.6E-38 297.1 19.4 263 355-629 8-314 (335)
355 KOG0579 Ste20-like serine/thre 100.0 1.5E-34 3.3E-39 303.7 9.2 251 357-628 34-289 (1187)
356 cd08216 PK_STRAD Pseudokinase 100.0 6.1E-33 1.3E-37 291.8 21.1 258 361-628 8-295 (314)
357 cd07829 STKc_CDK_like Catalyti 100.0 2.6E-33 5.5E-38 289.4 17.9 263 357-628 1-279 (282)
358 cd05606 STKc_beta_ARK Catalyti 100.0 6.9E-33 1.5E-37 286.5 21.0 243 362-628 1-255 (278)
359 cd08222 STKc_Nek11 Catalytic d 100.0 3E-33 6.5E-38 285.7 17.6 252 356-628 1-257 (260)
360 cd07857 STKc_MPK1 Catalytic do 100.0 1.2E-32 2.6E-37 292.3 22.5 263 356-627 1-291 (332)
361 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.6E-33 5.5E-38 298.7 17.3 262 355-628 5-300 (342)
362 KOG0983 Mitogen-activated prot 100.0 7E-34 1.5E-38 273.4 11.0 250 358-628 95-349 (391)
363 KOG0666 Cyclin C-dependent kin 100.0 7.1E-34 1.5E-38 277.8 11.1 288 355-648 24-358 (438)
364 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.5E-32 3.3E-37 292.8 22.3 262 352-627 12-297 (343)
365 KOG0200 Fibroblast/platelet-de 100.0 5.1E-33 1.1E-37 315.5 19.0 261 355-632 296-579 (609)
366 KOG1035 eIF-2alpha kinase GCN2 100.0 2.8E-33 6.1E-38 315.0 15.0 255 352-627 476-870 (1351)
367 KOG4250 TANK binding protein k 100.0 1.8E-33 3.9E-38 302.5 12.8 257 357-620 15-296 (732)
368 cd07851 STKc_p38 Catalytic dom 100.0 2.7E-33 5.9E-38 298.6 14.2 262 353-628 13-298 (343)
369 KOG0586 Serine/threonine prote 100.0 5.4E-33 1.2E-37 295.3 16.0 250 354-629 55-307 (596)
370 KOG4645 MAPKKK (MAP kinase kin 100.0 2.6E-34 5.6E-39 324.6 5.9 255 353-629 1233-1495(1509)
371 cd05123 STKc_AGC Catalytic dom 100.0 1.3E-32 2.8E-37 278.9 17.9 237 363-624 1-240 (250)
372 KOG0690 Serine/threonine prote 100.0 3.7E-33 8.1E-38 273.8 9.5 248 355-627 168-423 (516)
373 KOG0607 MAP kinase-interacting 100.0 1.3E-32 2.9E-37 269.6 12.3 264 345-627 73-360 (463)
374 KOG1006 Mitogen-activated prot 100.0 4.1E-34 8.8E-39 274.2 1.4 253 359-628 68-327 (361)
375 cd05610 STKc_MASTL Catalytic d 100.0 2E-31 4.4E-36 306.8 21.9 146 355-508 4-152 (669)
376 cd05576 STKc_RPK118_like Catal 100.0 1.1E-31 2.3E-36 270.9 16.9 220 366-622 4-223 (237)
377 smart00220 S_TKc Serine/Threon 100.0 4.4E-31 9.6E-36 264.9 19.1 239 367-627 1-240 (244)
378 KOG0604 MAP kinase-activated p 100.0 2.8E-32 6.1E-37 265.6 9.4 268 353-641 59-337 (400)
379 KOG1024 Receptor-like protein 100.0 1.2E-31 2.6E-36 269.1 14.0 266 347-630 276-553 (563)
380 PLN03225 Serine/threonine-prot 100.0 6.6E-31 1.4E-35 295.5 21.0 266 353-628 130-450 (566)
381 KOG0671 LAMMER dual specificit 100.0 3.8E-32 8.2E-37 273.4 9.5 263 354-628 88-406 (415)
382 KOG0662 Cyclin-dependent kinas 100.0 1E-31 2.3E-36 243.5 11.0 264 356-628 3-283 (292)
383 KOG0612 Rho-associated, coiled 100.0 1.2E-31 2.6E-36 299.7 13.2 219 339-565 59-285 (1317)
384 KOG4236 Serine/threonine prote 100.0 4.6E-32 1E-36 280.3 8.9 245 360-627 569-818 (888)
385 PLN03224 probable serine/threo 100.0 2.9E-30 6.3E-35 283.5 20.2 264 353-628 143-500 (507)
386 KOG0603 Ribosomal protein S6 k 100.0 1.1E-30 2.3E-35 279.2 13.4 241 354-628 321-563 (612)
387 KOG0696 Serine/threonine prote 100.0 5.9E-31 1.3E-35 265.3 9.4 241 355-620 349-593 (683)
388 KOG1151 Tousled-like protein k 100.0 1.7E-30 3.7E-35 263.9 11.6 256 355-626 463-739 (775)
389 KOG0669 Cyclin T-dependent kin 100.0 2E-31 4.2E-36 253.7 3.9 266 356-629 18-316 (376)
390 KOG0587 Traf2- and Nck-interac 100.0 9.4E-30 2E-34 278.7 17.3 262 345-628 9-282 (953)
391 KOG1027 Serine/threonine prote 100.0 3.1E-30 6.6E-35 281.3 8.5 246 357-627 511-766 (903)
392 KOG0664 Nemo-like MAPK-related 100.0 2E-30 4.4E-35 249.2 5.0 263 358-629 56-344 (449)
393 cd00180 PKc Catalytic domain o 100.0 7E-28 1.5E-32 235.5 20.3 212 363-629 1-215 (215)
394 KOG0608 Warts/lats-like serine 100.0 1.2E-28 2.7E-33 259.9 13.6 204 356-567 630-877 (1034)
395 KOG0984 Mitogen-activated prot 100.0 5.3E-29 1.2E-33 231.0 8.6 201 360-566 51-257 (282)
396 KOG0695 Serine/threonine prote 100.0 1.2E-28 2.6E-33 242.9 10.9 248 355-620 250-502 (593)
397 KOG0614 cGMP-dependent protein 100.0 2.5E-29 5.3E-34 259.7 6.1 249 356-628 421-677 (732)
398 smart00221 STYKc Protein kinas 99.9 7.7E-27 1.7E-31 231.9 19.8 200 357-563 1-202 (225)
399 KOG0670 U4/U6-associated splic 99.9 4.2E-28 9.1E-33 251.2 8.5 286 331-628 410-746 (752)
400 KOG1290 Serine/threonine prote 99.9 1.9E-26 4.1E-31 238.1 18.2 144 342-493 66-221 (590)
401 KOG0668 Casein kinase II, alph 99.9 2.5E-27 5.4E-32 222.9 10.1 253 354-628 37-322 (338)
402 KOG0665 Jun-N-terminal kinase 99.9 2.1E-27 4.5E-32 234.1 9.3 261 354-628 16-310 (369)
403 KOG0576 Mitogen-activated prot 99.9 3.3E-27 7.1E-32 251.4 6.1 253 355-627 15-270 (829)
404 KOG1152 Signal transduction se 99.9 1.4E-26 2.9E-31 243.0 8.4 197 355-562 561-770 (772)
405 KOG1345 Serine/threonine kinas 99.9 4.8E-26 1E-30 219.3 9.4 252 355-628 24-284 (378)
406 PLN00181 protein SPA1-RELATED; 99.9 5.7E-26 1.2E-30 267.7 7.8 196 408-628 28-265 (793)
407 KOG1167 Serine/threonine prote 99.9 6.6E-25 1.4E-29 224.3 9.7 263 353-628 34-381 (418)
408 smart00750 KIND kinase non-cat 99.9 7.8E-24 1.7E-28 203.1 14.7 166 437-631 1-168 (176)
409 PRK09188 serine/threonine prot 99.9 1.3E-22 2.7E-27 214.3 15.7 168 351-536 14-195 (365)
410 cd07308 lectin_leg-like legume 99.9 5.5E-21 1.2E-25 189.8 22.7 195 31-270 20-216 (218)
411 KOG1164 Casein kinase (serine/ 99.9 2E-21 4.3E-26 205.2 20.2 275 356-648 19-313 (322)
412 KOG0195 Integrin-linked kinase 99.9 6.2E-23 1.4E-27 197.7 5.9 244 360-632 195-446 (448)
413 COG0515 SPS1 Serine/threonine 99.9 4.7E-20 1E-24 191.9 23.0 259 357-628 2-275 (384)
414 KOG0590 Checkpoint kinase and 99.8 1.1E-21 2.5E-26 220.3 6.9 254 358-627 321-584 (601)
415 KOG1023 Natriuretic peptide re 99.8 3.3E-20 7.2E-25 199.3 11.7 214 406-632 1-224 (484)
416 PF14531 Kinase-like: Kinase-l 99.8 1.9E-19 4.2E-24 182.4 13.5 234 357-619 14-288 (288)
417 cd05147 RIO1_euk RIO kinase fa 99.8 2.1E-19 4.6E-24 174.5 11.8 140 360-511 2-168 (190)
418 PRK10359 lipopolysaccharide co 99.8 7.8E-20 1.7E-24 180.0 8.7 170 354-555 30-216 (232)
419 KOG1240 Protein kinase contain 99.8 4E-20 8.7E-25 207.2 6.8 248 356-631 24-294 (1431)
420 KOG1163 Casein kinase (serine/ 99.8 3.2E-19 7E-24 169.7 11.3 203 355-567 15-227 (341)
421 cd06901 lectin_VIP36_VIPL VIP3 99.8 5.8E-18 1.3E-22 169.1 19.6 200 30-270 19-221 (248)
422 KOG1165 Casein kinase (serine/ 99.8 7.7E-19 1.7E-23 174.3 12.2 199 356-564 29-239 (449)
423 cd05145 RIO1_like RIO kinase f 99.8 3.8E-18 8.2E-23 166.1 15.1 141 360-512 2-169 (190)
424 PRK12274 serine/threonine prot 99.8 8.3E-18 1.8E-22 162.2 13.9 186 358-564 5-210 (218)
425 PRK10345 hypothetical protein; 99.7 1.9E-17 4.2E-22 162.5 13.5 136 358-507 5-156 (210)
426 cd06902 lectin_ERGIC-53_ERGL E 99.7 2.7E-16 5.9E-21 155.1 21.6 199 31-270 22-222 (225)
427 KOG1166 Mitotic checkpoint ser 99.7 1.8E-16 3.9E-21 181.8 15.0 195 353-559 696-901 (974)
428 smart00090 RIO RIO-like kinase 99.7 2.3E-16 5.1E-21 158.4 13.7 143 356-511 29-199 (237)
429 PRK14879 serine/threonine prot 99.7 3E-16 6.5E-21 155.2 12.4 134 361-509 2-143 (211)
430 PRK09605 bifunctional UGMP fam 99.7 4.8E-16 1E-20 175.3 15.3 139 353-510 331-477 (535)
431 KOG4158 BRPK/PTEN-induced prot 99.7 2.3E-16 4.9E-21 160.1 10.9 196 410-629 274-511 (598)
432 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.6E-17 3.5E-22 175.3 2.7 123 426-556 330-457 (516)
433 cd05144 RIO2_C RIO kinase fami 99.7 6.6E-16 1.4E-20 151.4 13.7 145 349-512 9-177 (198)
434 KOG0603 Ribosomal protein S6 k 99.7 1.6E-17 3.5E-22 178.6 2.2 226 362-622 1-232 (612)
435 TIGR03724 arch_bud32 Kae1-asso 99.7 6.6E-16 1.4E-20 151.4 12.6 130 362-509 1-138 (199)
436 cd06903 lectin_EMP46_EMP47 EMP 99.6 9.2E-14 2E-18 136.0 18.3 188 31-269 21-211 (215)
437 cd05120 APH_ChoK_like Aminogly 99.6 2.3E-14 4.9E-19 132.7 13.0 135 359-509 2-138 (155)
438 KOG0606 Microtubule-associated 99.6 2.6E-15 5.6E-20 169.1 7.0 211 355-623 83-307 (1205)
439 PF03388 Lectin_leg-like: Legu 99.6 8.1E-14 1.8E-18 138.8 15.6 198 31-267 22-223 (229)
440 cd05119 RIO RIO kinase family, 99.5 4.2E-14 9.1E-19 137.0 12.0 138 360-511 2-165 (187)
441 PRK01723 3-deoxy-D-manno-octul 99.5 1E-13 2.2E-18 139.6 12.8 135 360-509 36-191 (239)
442 KOG0590 Checkpoint kinase and 99.4 1.4E-14 3.1E-19 163.2 0.6 255 355-627 20-285 (601)
443 KOG1266 Protein kinase [Signal 99.4 3E-13 6.6E-18 134.8 6.7 203 404-629 119-332 (458)
444 TIGR01982 UbiB 2-polyprenylphe 99.4 1.7E-12 3.7E-17 141.9 11.7 142 360-512 122-309 (437)
445 KOG3839 Lectin VIP36, involved 99.4 1.1E-11 2.3E-16 123.4 14.2 198 31-269 72-272 (351)
446 KOG0601 Cyclin-dependent kinas 99.3 2.2E-12 4.8E-17 139.3 6.5 248 356-627 115-378 (524)
447 PRK04750 ubiB putative ubiquin 99.2 1.1E-11 2.5E-16 137.1 7.6 146 355-512 120-316 (537)
448 KOG1243 Protein kinase [Genera 99.2 4E-10 8.6E-15 123.1 16.7 171 373-558 30-200 (690)
449 cd05151 ChoK Choline Kinase (C 99.2 8.4E-11 1.8E-15 111.8 10.3 131 360-509 3-136 (170)
450 KOG3838 Mannose lectin ERGIC-5 99.1 3.1E-09 6.8E-14 107.5 16.9 195 32-268 55-251 (497)
451 KOG3741 Poly(A) ribonuclease s 99.1 3E-09 6.6E-14 112.7 16.1 172 368-560 289-475 (655)
452 KOG0601 Cyclin-dependent kinas 99.1 1.3E-10 2.9E-15 125.6 5.8 248 352-630 262-516 (524)
453 cd05154 ACAD10_11_like Acyl-Co 99.0 1.5E-09 3.3E-14 107.7 12.4 143 360-509 3-206 (223)
454 cd05146 RIO3_euk RIO kinase fa 99.0 4.6E-09 1E-13 101.6 14.4 138 361-512 3-176 (197)
455 COG3642 Mn2+-dependent serine/ 98.9 7.1E-09 1.5E-13 97.0 11.7 131 361-509 2-140 (204)
456 KOG3087 Serine/threonine prote 98.9 1.3E-08 2.7E-13 94.9 11.7 144 359-510 11-166 (229)
457 cd06900 lectin_VcfQ VcfQ bacte 98.8 5.8E-07 1.3E-11 86.9 19.1 202 44-267 31-251 (255)
458 KOG0606 Microtubule-associated 98.8 2.4E-09 5.2E-14 121.7 3.1 250 353-623 802-1084(1205)
459 PRK15123 lipopolysaccharide co 98.7 1.1E-07 2.4E-12 97.0 13.6 141 361-509 28-194 (268)
460 PF01163 RIO1: RIO1 family; I 98.7 9.8E-08 2.1E-12 92.0 12.3 126 370-511 1-157 (188)
461 COG4248 Uncharacterized protei 98.7 7.2E-07 1.6E-11 92.8 16.4 257 359-630 15-298 (637)
462 KOG2137 Protein kinase [Signal 98.5 4.2E-08 9.1E-13 107.9 2.3 150 464-627 106-264 (700)
463 PRK09902 hypothetical protein; 98.4 2.3E-06 5E-11 83.1 12.2 137 363-508 26-178 (216)
464 COG0661 AarF Predicted unusual 98.4 9.2E-07 2E-11 97.7 10.4 141 361-512 131-317 (517)
465 COG0478 RIO-like serine/threon 98.4 3.1E-06 6.8E-11 84.1 11.9 134 358-509 94-251 (304)
466 PF06293 Kdo: Lipopolysacchari 98.3 3.7E-06 8E-11 82.8 10.8 106 396-509 55-170 (206)
467 PF06176 WaaY: Lipopolysacchar 98.2 1.8E-05 3.8E-10 77.3 12.5 137 354-509 30-183 (229)
468 TIGR02172 Fb_sc_TIGR02172 Fibr 98.1 2.3E-05 5E-10 78.3 12.4 141 361-508 7-181 (226)
469 COG1718 RIO1 Serine/threonine 98.0 0.00013 2.7E-09 72.2 14.0 154 345-512 35-218 (268)
470 KOG1235 Predicted unusual prot 98.0 2.7E-05 5.7E-10 86.0 9.7 144 360-513 166-358 (538)
471 PF01636 APH: Phosphotransfera 97.9 8E-05 1.7E-09 74.1 12.0 144 360-508 2-196 (239)
472 PF12260 PIP49_C: Protein-kina 97.9 5.6E-05 1.2E-09 73.1 9.1 104 401-510 8-112 (188)
473 PLN02876 acyl-CoA dehydrogenas 97.9 0.00016 3.4E-09 86.1 14.4 81 360-440 43-132 (822)
474 KOG0576 Mitogen-activated prot 97.9 2.7E-06 5.8E-11 92.9 -0.6 182 360-561 247-430 (829)
475 cd05150 APH Aminoglycoside 3'- 97.8 0.00015 3.3E-09 73.3 12.0 140 363-508 6-192 (244)
476 PRK10593 hypothetical protein; 97.5 0.0011 2.4E-08 69.1 13.3 77 359-439 18-100 (297)
477 KOG1035 eIF-2alpha kinase GCN2 97.5 0.00062 1.3E-08 79.8 12.2 199 397-630 227-436 (1351)
478 cd05155 APH_ChoK_like_1 Unchar 97.5 0.00061 1.3E-08 68.5 11.0 75 361-442 3-84 (235)
479 PF13095 FTA2: Kinetochore Sim 97.4 0.0017 3.6E-08 62.9 11.4 125 355-507 37-206 (207)
480 PRK09550 mtnK methylthioribose 97.4 0.0049 1.1E-07 66.5 16.1 77 360-438 31-117 (401)
481 TIGR02721 ycfN_thiK thiamine k 97.4 0.0012 2.5E-08 67.4 10.8 139 363-509 4-175 (256)
482 cd05157 ETNK_euk Ethanolamine 97.4 0.0019 4E-08 64.8 12.1 76 360-440 3-80 (235)
483 PF10707 YrbL-PhoP_reg: PhoP r 97.3 0.0019 4.1E-08 62.9 10.8 129 359-503 5-165 (199)
484 COG2112 Predicted Ser/Thr prot 97.3 0.0016 3.4E-08 61.1 9.6 128 359-509 26-155 (201)
485 cd05153 HomoserineK_II Homoser 97.1 0.0055 1.2E-07 63.8 12.1 145 360-509 19-205 (296)
486 PRK05231 homoserine kinase; Pr 97.0 0.0099 2.1E-07 62.6 13.7 145 360-509 27-217 (319)
487 TIGR00938 thrB_alt homoserine 96.8 0.012 2.6E-07 61.6 11.9 145 360-508 27-216 (307)
488 cd05152 MPH2' Macrolide 2'-Pho 96.7 0.023 5E-07 58.6 12.8 31 479-509 185-216 (276)
489 cd05156 ChoK_euk Choline Kinas 96.7 0.016 3.5E-07 60.5 11.7 144 361-509 4-213 (302)
490 PF03881 Fructosamin_kin: Fruc 96.3 0.043 9.2E-07 56.8 12.2 75 358-437 20-97 (288)
491 PLN02236 choline kinase 96.2 0.043 9.3E-07 58.5 12.0 144 361-509 42-231 (344)
492 KOG1826 Ras GTPase activating 96.1 0.00091 2E-08 80.1 -1.8 163 398-562 1275-1441(2724)
493 COG3173 Predicted aminoglycosi 96.0 0.071 1.5E-06 55.7 11.9 131 368-510 38-229 (321)
494 KOG2268 Serine/threonine prote 96.0 0.0078 1.7E-07 61.8 4.6 137 357-512 94-254 (465)
495 KOG1093 Predicted protein kina 95.8 0.0085 1.8E-07 64.9 3.9 157 397-624 27-190 (725)
496 PLN02421 phosphotransferase, a 95.7 0.083 1.8E-06 56.0 11.1 144 361-509 20-213 (330)
497 PF01633 Choline_kinase: Choli 95.6 0.047 1E-06 53.8 8.3 31 479-509 143-174 (211)
498 COG5072 ALK1 Serine/threonine 95.4 0.097 2.1E-06 54.8 10.0 106 425-550 299-404 (488)
499 TIGR02904 spore_ysxE spore coa 95.3 0.15 3.2E-06 53.5 11.2 32 478-509 195-226 (309)
500 PRK12396 5-methylribose kinase 95.2 0.048 1E-06 58.5 7.1 82 360-443 34-125 (409)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-57 Score=478.59 Aligned_cols=290 Identities=44% Similarity=0.793 Sum_probs=256.1
Q ss_pred CccccchHHHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeee
Q 040242 341 GACRFRYSELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGW 420 (662)
Q Consensus 341 ~~~~~~~~el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~ 420 (662)
....|+|+|+..||++|...++||+|+||.||+|.+. +|..||||++.....+..++|.+|+.++.+++|||||+|+||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 4667999999999999999999999999999999995 458999998877654325669999999999999999999999
Q ss_pred EeccC-eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCe
Q 040242 421 CRKQD-ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNP 499 (662)
Q Consensus 421 ~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 499 (662)
|.+.+ +.+||||||++|+|+++|+..... .|+|.+|++|+.++|+||+|||+.+.++|+||||||+|||||+++++
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~---~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~a 216 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE---PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNA 216 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCC---CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCE
Confidence 99999 599999999999999999876421 89999999999999999999999998899999999999999999999
Q ss_pred EEeeccccccccC-CCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHH
Q 040242 500 KLGDFGLARAYDH-NINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRE 578 (662)
Q Consensus 500 kL~DfGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~ 578 (662)
||+|||+++.... ........ .||.+|+|||+...+..++|+|||||||+|+||+||+.+.+......+..+.+|++.
T Consensus 217 KlsDFGLa~~~~~~~~~~~~~~-~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~ 295 (361)
T KOG1187|consen 217 KLSDFGLAKLGPEGDTSVSTTV-MGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKP 295 (361)
T ss_pred EccCccCcccCCccccceeeec-CCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHH
Confidence 9999999976544 22111111 799999999999999999999999999999999999999887655555669999999
Q ss_pred HhhcCccccccCCCCC--CCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCC
Q 040242 579 LHSQGQITRAIDPTLD--YFDP-QEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDASL 635 (662)
Q Consensus 579 ~~~~~~~~~~id~~l~--~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~~ 635 (662)
.+.++++.+.+|+.+. .+.. ++..++..++.+|++.+|.+||+|.||+++|+.....
T Consensus 296 ~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~~ 355 (361)
T KOG1187|consen 296 LLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILSL 355 (361)
T ss_pred HHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhccc
Confidence 9999999999999983 4554 6888899999999999999999999999999655433
No 2
>cd06899 lectin_legume_LecRK_Arcelin_ConA legume lectins, lectin-like receptor kinases, arcelin, concanavalinA, and alpha-amylase inhibitor. This alignment model includes the legume lectins (also known as agglutinins), the arcelin (also known as phytohemagglutinin-L) family of lectin-like defense proteins, the LecRK family of lectin-like receptor kinases, concanavalinA (ConA), and an alpha-amylase inhibitor. Arcelin is a major seed glycoprotein discovered in kidney beans (Phaseolus vulgaris) that has insecticidal properties and protects the seeds from predation by larvae of various bruchids. Arcelin is devoid of monosaccharide binding properties and lacks a key metal-binding loop that is present in other members of this family. Phytohaemagglutinin (PHA) is a lectin found in plants, especially beans, that affects cell metabolism by inducing mitosis and by altering the permeability of the cell membrane to various proteins. PHA agglutinates most mammalian red blood cell types by bindin
Probab=100.00 E-value=5.6e-55 Score=436.64 Aligned_cols=231 Identities=46% Similarity=0.766 Sum_probs=208.7
Q ss_pred eeEEeCCCCC--CCeeEecceeeeCCCeEEecCCC--CCeeEEEEcCCceeecccccccccCCCCCceeeeeEEEEEEEE
Q 040242 21 NSFIYNGFIQ--ANLSLDGTAFVRKDGILAVSNDQ--GRILGHAFYPSPLRFKQLSKYNINNNTISHTALTFSTNFVFSI 96 (662)
Q Consensus 21 ~~f~~~~f~~--~~~~l~G~a~~~~~~~~~Lt~~~--~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~~~~~sF~t~F~f~i 96 (662)
++|+|++|.. .+|+|+|+|.+.+++.|+||++. .+++|||+|++||+|| +..++.++||+|+|+|+|
T Consensus 1 ~~f~f~~f~~~~~~l~l~G~A~~~~~~~i~LT~~~~~~~~~G~v~y~~pi~l~---------~~~~~~~~sFst~F~F~i 71 (236)
T cd06899 1 LSFNFNGFSSDQSNLTLQGDATISSNGALQLTNDTSPASSVGRALYSKPVRLW---------DSTTGKVASFSTSFSFSI 71 (236)
T ss_pred CceecCCCCCCCCCEEEecceEcCCCCeEEecCCCCCCcceEEEEeCCCEEee---------cCCCCCceeEEEEEEEEE
Confidence 4799999986 79999999999768999999998 8999999999999999 666778888999999999
Q ss_pred ecCCCCCCCCceeEEEccCCCCCCCCcccccCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCeeEEecCCCcccccc
Q 040242 97 VPKYPQLGGHGLAFVLMSRKQPPSCLANQYLGLPNDTSNAKFSTRILAVEFDAVQNLELQDINDNHVGIDISSLISNISE 176 (662)
Q Consensus 97 ~~~~~~~~gdGlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~ 176 (662)
.+.+...+||||||+|+|....+.+..|++|||++..+.+++.+++|||||||++|.+++||++||||||+|++.|..+.
T Consensus 72 ~~~~~~~~gdGlAF~i~~~~~~~~~~~G~~lG~~~~~~~~~~~~~~vAVEFDT~~n~~~~D~~~nHigIdvn~~~S~~~~ 151 (236)
T cd06899 72 TPPNPSLGGDGLAFFLAPTDSLPPASSGGYLGLFNSSNNGNSSNHIVAVEFDTFQNPEFGDPDDNHVGIDVNSLVSVKAG 151 (236)
T ss_pred EcCCCCCCCCeEEEEEecCCCCCCCCCcceeeeecCCCCCCcccceEEEEeecccCcccCCCCCCeEEEEcCCcccceee
Confidence 98776789999999999987666678999999999887777889999999999999988899999999999999887766
Q ss_pred cccccccCCCCCCCCCcceeecCCCcEEEEEEEeCCCcEEEEEEccCCCCCCCCCeeeeecccccccccceEEeeeccCC
Q 040242 177 PAAYYFSKGSNINDDNISVVLKSGDPIQAWIDYNSQEMLINVTISPLGIPKPHRPLISYPIDLATVLDEYMYVGFSASTG 256 (662)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~V~~~~~~~~~~~~~~ls~~vdL~~~l~~~~~vGFsastG 256 (662)
.+.. ..+.+.+|+.++|||+|++.+++|+|++...+..+|..|++++.+||+.+|+++|||||||+||
T Consensus 152 ~~~~------------~~~~l~~g~~~~v~I~Y~~~~~~L~V~l~~~~~~~~~~~~ls~~vdL~~~l~~~~~vGFSasTG 219 (236)
T cd06899 152 YWDD------------DGGKLKSGKPMQAWIDYDSSSKRLSVTLAYSGVAKPKKPLLSYPVDLSKVLPEEVYVGFSASTG 219 (236)
T ss_pred cccc------------ccccccCCCeEEEEEEEcCCCCEEEEEEEeCCCCCCcCCEEEEeccHHHhCCCceEEEEEeEcC
Confidence 5531 1234789999999999999999999999987777888999999999999999999999999999
Q ss_pred cccceeEEecceeeec
Q 040242 257 LLTAFHNVHGWSFKIG 272 (662)
Q Consensus 257 ~~~~~~~i~sW~f~~~ 272 (662)
...|.|+|++|+|++.
T Consensus 220 ~~~~~h~i~sWsF~s~ 235 (236)
T cd06899 220 LLTELHYILSWSFSSN 235 (236)
T ss_pred CCcceEEEEEEEEEcC
Confidence 9999999999999864
No 3
>PF00139 Lectin_legB: Legume lectin domain; InterPro: IPR001220 Legume lectins are one of the largest lectin families with more than 70 lectins reported. Leguminous plant lectins resemble each other in their physicochemical properties although they differ in their carbohydrate specificities. They consist of two or four subunits with relative molecular mass of 30 kDa and each subunit has one carbohydrate-binding site. The interaction with sugars requires tightly bound calcium and manganese ions. The structural similarities of these lectins are reported by the primary structural analyses and X-ray crystallographic studies. X-ray studies have shown that the folding of the polypeptide chains in the region of the carbohydrate-binding sites is also similar, despite differences in the primary sequences. The carbohydrate-binding sites of these lectins consist of two conserved amino acids on beta pleated sheets. One of these loops contains transition metals, calcium and manganese, which keep the amino acid residues of the sugar-binding site at the required positions. Amino acid sequences of this loop play an important role in the carbohydrate-binding specificities of these lectins. These lectins bind either glucose/mannose or galactose. The exact function of legume lectins is not known but they may be involved in the attachment of nitrogen-fixing bacteria to legumes and in the protection against pathogens. Some legume lectins are proteolytically processed to produce two chains, beta (which corresponds to the N-terminal) and alpha (C-terminal) (IPR000985 from INTERPRO). The lectin concanavalin A (conA) from jack bean is exceptional in that the two chains are transposed and ligated (by formation of a new peptide bond). The N terminus of mature conA thus corresponds to that of the alpha chain and the C terminus to the beta chain.; GO: 0005488 binding; PDB: 1VLN_B 2GDF_C 2JE9_C 2JEC_C 1DGL_B 2P37_B 2CWM_A 2P34_D 2OW4_A 3IPV_B ....
Probab=100.00 E-value=1.5e-53 Score=427.67 Aligned_cols=232 Identities=37% Similarity=0.622 Sum_probs=203.8
Q ss_pred ceeEEeCCC-CCCCeeEecceeeeCCCeEEecCCCC-CeeEEEEcCCceeecccccccccCCCCCceeeeeEEEEEEEEe
Q 040242 20 TNSFIYNGF-IQANLSLDGTAFVRKDGILAVSNDQG-RILGHAFYPSPLRFKQLSKYNINNNTISHTALTFSTNFVFSIV 97 (662)
Q Consensus 20 ~~~f~~~~f-~~~~~~l~G~a~~~~~~~~~Lt~~~~-~~~Gr~~y~~pv~l~~~~~~~~~~~~~~~~~~sF~t~F~f~i~ 97 (662)
+++|+|+.| +..+++|+|+|.+..+|.|+||++.. +++|||||++||+|| +..++.++||+|+|+|+|.
T Consensus 1 ~~~F~~~~F~~~~~~~l~G~A~~~~~~~l~LT~~~~~~~~G~~~y~~pi~l~---------d~~~~~~~sF~t~F~f~i~ 71 (236)
T PF00139_consen 1 SVSFSFPSFSNSSNLTLNGDASISSNGSLQLTPDSTNNQAGRAWYNNPIQLW---------DSTTGNVASFSTSFSFSIT 71 (236)
T ss_dssp EEEEEESSBTTGTTEEEEETEEEETTSEEESSTBETSSEEEEEEESSEEESB---------ETTTTEBEEEEEEEEEEEE
T ss_pred CceEEcCCCCCCCceEEEeeEEeccCCeEEcCCCCCCCcEEEEEECCcEEEe---------CCCCcceeeeeeEEEEEEe
Confidence 478999999 56899999999996689999999988 999999999999999 6667777889999999996
Q ss_pred cC--CCCCCCCceeEEEccCCCCCCCCcccccCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCeeEEecCCCccccc
Q 040242 98 PK--YPQLGGHGLAFVLMSRKQPPSCLANQYLGLPNDTSNAKFSTRILAVEFDAVQNLELQDINDNHVGIDISSLISNIS 175 (662)
Q Consensus 98 ~~--~~~~~gdGlaF~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~ 175 (662)
.. ....+||||||||+|....+.++.|++||+++..+.+.+.+++|||||||++|++++||++||||||+|++.|..+
T Consensus 72 ~~~~~~~~~~dGlAFvi~~~~~~~~~~~g~~lG~~~~~~~~~~~~~~vAVEFDT~~N~~~~d~~~nHIgI~~n~~~s~~~ 151 (236)
T PF00139_consen 72 NGPGSSNNGGDGLAFVIQPDPNLPGGSSGGYLGLFNSSTDGNGINNSVAVEFDTYKNPEYNDPDDNHIGIDVNSVVSNKT 151 (236)
T ss_dssp ESSSSSSS-BEEEEEEEEETTSSTTTSSGGGTTTSSSSSTTGGGGCEEEEEEETSTCGGGTTTSSSEEEEEESSSSESEE
T ss_pred ccCCCCccCCCceEEEEecCcccccCCCCCccCccccccCCCccCcEEEEEEeeeecccccccCCCEEEEECCCCccccc
Confidence 43 4577899999999999866777899999999988777778999999999999999999999999999999999888
Q ss_pred ccccccccCCCCCCCCCcceeecCCCcEEEEEEEeCCCcEEEEEEccCCCCCCCCCeeeeecccccccccceEEeeeccC
Q 040242 176 EPAAYYFSKGSNINDDNISVVLKSGDPIQAWIDYNSQEMLINVTISPLGIPKPHRPLISYPIDLATVLDEYMYVGFSAST 255 (662)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~V~~~~~~~~~~~~~~ls~~vdL~~~l~~~~~vGFsast 255 (662)
.+++++ ......+.+|+.++|||+||+.+++|+|++.... .+|..|++++.+||+.+|+++|||||||||
T Consensus 152 ~~~~~~---------~~~~~~l~~g~~~~v~I~Yd~~~~~L~V~l~~~~-~~~~~~~l~~~vdL~~~l~~~v~vGFsasT 221 (236)
T PF00139_consen 152 ASAGYY---------SSPSFSLSDGKWHTVWIDYDASTKRLSVYLDDNS-SKPSSPVLSVNVDLSAVLPEQVYVGFSAST 221 (236)
T ss_dssp EE-------------EEEEHHHGTTSEEEEEEEEETTTTEEEEEEEETT-TTSEEEEEEEE--HHHHSCSEEEEEEEEEE
T ss_pred cccccc---------ccccccccCCcEEEEEEEEcCCccEEEEEEeccc-CCCcceeEEEEEchHHhcCCCcEEEEEeec
Confidence 766644 2245678999999999999999999999999874 688889999999999999999999999999
Q ss_pred CcccceeEEecceee
Q 040242 256 GLLTAFHNVHGWSFK 270 (662)
Q Consensus 256 G~~~~~~~i~sW~f~ 270 (662)
|...|.|.|++|+|+
T Consensus 222 G~~~~~h~I~sW~F~ 236 (236)
T PF00139_consen 222 GGSYQTHDILSWSFS 236 (236)
T ss_dssp SSSSEEEEEEEEEEE
T ss_pred CCCcceEEEEEEEeC
Confidence 999999999999995
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=2e-45 Score=387.31 Aligned_cols=250 Identities=32% Similarity=0.538 Sum_probs=207.3
Q ss_pred ccceeeeeCceEEEEEEeCCCCcE-EEEEEeeccch--hhHHHHHHHHHHhhccccccceeeeeeEeccC-eeeEEEecc
Q 040242 359 EKNLVGSGGFGKVYRGVIPSTGLE-VAIKRVAHNSR--QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD-ELLLVYDYV 434 (662)
Q Consensus 359 ~~~~LG~G~~g~Vy~~~~~~~g~~-vavK~~~~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~-~~~lV~E~~ 434 (662)
..+.||+|+||+||+|.+. |+. ||||++..... ...++|.+|+.+|.+++|||||+++|+|.+.. .+++|||||
T Consensus 45 ~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~ 122 (362)
T KOG0192|consen 45 IEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYM 122 (362)
T ss_pred hhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeC
Confidence 3456999999999999994 555 99999976532 22679999999999999999999999999887 799999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCC-EEeCCcCCCceEeCCCC-CeEEeeccccccccC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQR-VVHRDVKPSNVLIDADL-NPKLGDFGLARAYDH 512 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-ivH~Dlkp~NIll~~~~-~~kL~DfGla~~~~~ 512 (662)
++|+|.++|+.. ....+++..+++++.|||+||.|||+ .+ ||||||||+||||+.++ ++||+|||+++....
T Consensus 123 ~~GsL~~~l~~~---~~~~l~~~~~l~~aldiArGm~YLH~---~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~ 196 (362)
T KOG0192|consen 123 PGGSLSVLLHKK---RKRKLPLKVRLRIALDIARGMEYLHS---EGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI 196 (362)
T ss_pred CCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence 999999999875 25779999999999999999999999 56 99999999999999997 999999999987654
Q ss_pred CCCCcceecccCCcccCccccc--CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 513 NINPQTTHIVGTLGYLAPELTR--TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~--~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
.. ...+...||+.|||||++. ...++.|+||||||++||||+||+.||..... .+.. ..+. .....
T Consensus 197 ~~-~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~--~~v~--------~~~~R 264 (362)
T KOG0192|consen 197 SK-TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVA--SAVV--------VGGLR 264 (362)
T ss_pred cc-ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHH--HHHH--------hcCCC
Confidence 32 2333368999999999999 56899999999999999999999999987654 1111 1111 01111
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
| ..+......+..|+.+||+.||.+||++.+|+..|+.
T Consensus 265 p---~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~ 302 (362)
T KOG0192|consen 265 P---PIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLES 302 (362)
T ss_pred C---CCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHH
Confidence 2 2233366778888899999999999999999999974
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=9.6e-45 Score=364.64 Aligned_cols=255 Identities=27% Similarity=0.395 Sum_probs=214.4
Q ss_pred cchHHHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEec
Q 040242 345 FRYSELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRK 423 (662)
Q Consensus 345 ~~~~el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~ 423 (662)
++.+||.. .+.||+|..|+|||+.++.+++.+|+|.+... .....+++.+|++++++.+|||||+++|+|..
T Consensus 76 i~~~dle~-------~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLER-------LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhh-------hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 45555543 67899999999999999999999999999655 44556889999999999999999999999999
Q ss_pred cC-eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEe
Q 040242 424 QD-ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLG 502 (662)
Q Consensus 424 ~~-~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 502 (662)
++ +..++||||.+|+|++++... +.+++...-+|+.++++||.|||++ .+||||||||+|||++..|.+|||
T Consensus 149 ~~~~isI~mEYMDgGSLd~~~k~~-----g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKic 221 (364)
T KOG0581|consen 149 NGEEISICMEYMDGGSLDDILKRV-----GRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKIC 221 (364)
T ss_pred CCceEEeehhhcCCCCHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEec
Confidence 99 599999999999999999543 4588999999999999999999964 899999999999999999999999
Q ss_pred eccccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccc--hhhHHHHHHHHHHh
Q 040242 503 DFGLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRT--AMELVLVDWVRELH 580 (662)
Q Consensus 503 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~--~~~~~l~~~~~~~~ 580 (662)
|||.++.+-+. .....+||..|||||.+.+..|+.++||||||+.++|+.+|+.|+....+ .....+..++
T Consensus 222 DFGVS~~lvnS---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~I---- 294 (364)
T KOG0581|consen 222 DFGVSGILVNS---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAI---- 294 (364)
T ss_pred cccccHHhhhh---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHH----
Confidence 99999876544 33457899999999999999999999999999999999999999986421 1222222222
Q ss_pred hcCccccccCCCCCCCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 581 SQGQITRAIDPTLDYFDP-QEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 581 ~~~~~~~~id~~l~~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
++..-...+. ....++..++..||+.||.+||++.|++++
T Consensus 295 --------v~~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 295 --------VDEPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred --------hcCCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 2211122223 367788999999999999999999999974
No 6
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.9e-44 Score=378.88 Aligned_cols=253 Identities=26% Similarity=0.440 Sum_probs=216.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
.+|...+.||+|||+.||++++..+|+.||+|++.+. .....+...+||++.++|+|||||+++++|++.+..|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5688899999999999999999899999999999774 3445677899999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
|+|++++|..++++ ++.+++.+.+.+..||+.||.|||+ .+|+|||||..|+||++++++||+|||||...+
T Consensus 98 ELC~~~sL~el~Kr-----rk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le 169 (592)
T KOG0575|consen 98 ELCHRGSLMELLKR-----RKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGLATQLE 169 (592)
T ss_pred EecCCccHHHHHHh-----cCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccceeeeec
Confidence 99999999999952 5789999999999999999999999 899999999999999999999999999999887
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
.+... ....+|||.|+|||++.....+..+||||+||+||-|++|++||+...-. +.+..-+..+..-
T Consensus 170 ~~~Er-k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vk----------ety~~Ik~~~Y~~- 237 (592)
T KOG0575|consen 170 YDGER-KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVK----------ETYNKIKLNEYSM- 237 (592)
T ss_pred Ccccc-cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHH----------HHHHHHHhcCccc-
Confidence 65433 34469999999999999888999999999999999999999999865322 2222111122221
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhcC
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ--FLLRD 632 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~--~L~~~ 632 (662)
+........+|+.++|++||.+|||+++|+. ++.+.
T Consensus 238 -----P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g 275 (592)
T KOG0575|consen 238 -----PSHLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSG 275 (592)
T ss_pred -----ccccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCC
Confidence 2234455778899999999999999999997 45333
No 7
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-44 Score=378.87 Aligned_cols=251 Identities=29% Similarity=0.436 Sum_probs=213.0
Q ss_pred cccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCC
Q 040242 358 REKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG 437 (662)
Q Consensus 358 ~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 437 (662)
...+.||+|.||.||.|.+. ....||+|.+... ....+.|.+|+++|++|+|+|||+++|+|..++.++||||||+.|
T Consensus 209 ~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~G 286 (468)
T KOG0197|consen 209 KLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKG 286 (468)
T ss_pred HHHHHhcCCccceEEEEEEc-CCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccC
Confidence 34678999999999999994 3458999999765 334578999999999999999999999999999999999999999
Q ss_pred CcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCc
Q 040242 438 SLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQ 517 (662)
Q Consensus 438 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~ 517 (662)
+|.++|.... ...+...+.+.++.|||+||+||++ +++|||||.++||||+++..+||+|||||+....+....
T Consensus 287 sLl~yLr~~~---~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~ 360 (468)
T KOG0197|consen 287 SLLDYLRTRE---GGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA 360 (468)
T ss_pred cHHHHhhhcC---CCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCCceee
Confidence 9999997633 5678999999999999999999999 899999999999999999999999999999666554444
Q ss_pred ceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC-CC
Q 040242 518 TTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL-DY 595 (662)
Q Consensus 518 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l-~~ 595 (662)
.....-+..|.|||.+..+.++.|||||||||+||||+| |+.|+......+. .+.++... -.
T Consensus 361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev----------------~~~le~GyRlp 424 (468)
T KOG0197|consen 361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV----------------LELLERGYRLP 424 (468)
T ss_pred cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHH----------------HHHHhccCcCC
Confidence 444456789999999999999999999999999999999 8888876543221 12222222 23
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 596 FDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 596 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
.+..++..+.+|+..||+.+|++|||++.+...|+..
T Consensus 425 ~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 425 RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence 4567888999999999999999999999988888653
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-43 Score=354.66 Aligned_cols=201 Identities=28% Similarity=0.519 Sum_probs=182.7
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
.+|...+.||+|.|++||+|+++.++..||||.+.+. .....+....|+.+|++++|||||++++++..++.++||||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 5677788899999999999999999999999999776 56666778999999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC------CCeEEeeccc
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD------LNPKLGDFGL 506 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~------~~~kL~DfGl 506 (662)
||.+|+|.++|+.. ..+++.....++.|||.||++||+ ++||||||||+||||+.. -.+||+|||+
T Consensus 90 yC~gGDLs~yi~~~-----~~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRR-----GRLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred eCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 99999999999643 469999999999999999999999 999999999999999875 4589999999
Q ss_pred cccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccc
Q 040242 507 ARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQR 565 (662)
Q Consensus 507 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~ 565 (662)
|+.+... ......+|++.|||||++...+|+.|+|+||+|+||||+++|+.||+...
T Consensus 162 AR~L~~~--~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 162 ARFLQPG--SMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred hhhCCch--hHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 9987643 33445789999999999999999999999999999999999999998543
No 9
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9e-44 Score=342.97 Aligned_cols=262 Identities=27% Similarity=0.438 Sum_probs=214.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeee-EeccCe-eeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGW-CRKQDE-LLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~-~~~~~~-~~lV 430 (662)
.+|++.++||+|.||+|||+....+|..+|.|.++-. .....+++..|+.+|++|+|||||+++++ +.++.+ ++||
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv 98 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV 98 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence 3477889999999999999999999999999998754 45566789999999999999999999994 344444 8999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCC-CEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQ-RVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~-~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
||||..|+|..++...... +..++++..|+++.|++.||..+|+.+.. -|+||||||.||+|+.+|.+||+||||++.
T Consensus 99 mE~c~~GDLsqmIk~~K~q-kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 99 MELCDAGDLSQMIKHFKKQ-KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHhhcccCHHHHHHHHHhc-cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 9999999999999765432 56799999999999999999999985532 499999999999999999999999999998
Q ss_pred ccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcccccc
Q 040242 510 YDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAI 589 (662)
Q Consensus 510 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 589 (662)
+.... ......+|||.||+||.+....++.||||||+||++|||+.-+.||.+..- ..| .+...+++
T Consensus 178 l~s~~-tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~---~~L----~~KI~qgd----- 244 (375)
T KOG0591|consen 178 LSSKT-TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNL---LSL----CKKIEQGD----- 244 (375)
T ss_pred hcchh-HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccH---HHH----HHHHHcCC-----
Confidence 87643 233447899999999999999999999999999999999999999987621 111 12222221
Q ss_pred CCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 590 DPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 590 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
-|.+. +.-....+..|+..|+..||+.||+...+++.+.++
T Consensus 245 ~~~~p--~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~~ 285 (375)
T KOG0591|consen 245 YPPLP--DEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQSE 285 (375)
T ss_pred CCCCc--HHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHHH
Confidence 11121 245678899999999999999999976666665543
No 10
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.1e-43 Score=353.52 Aligned_cols=253 Identities=27% Similarity=0.405 Sum_probs=204.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh-------hHHHHHHHHHHhhccccccceeeeeeEeccCee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ-------GMKEFVAEITSMGRLRHRNLVQLHGWCRKQDEL 427 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~-------~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 427 (662)
+.|...+.||+|+||.|-+|+.+.+|+.||||++.+.... ......+|+++|++|+|||||++++++...+..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 4466789999999999999999999999999999765211 122356999999999999999999999999999
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC---CCeEEeec
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD---LNPKLGDF 504 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kL~Df 504 (662)
|+|||||+||.|.+.+..+ +.+.+..-.-+++|++.|+.|||+ .+|+||||||+|||+..+ ..+||+||
T Consensus 252 YmVlE~v~GGeLfd~vv~n-----k~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e~~llKItDF 323 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVAN-----KYLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAEDCLLKITDF 323 (475)
T ss_pred EEEEEEecCccHHHHHHhc-----cccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCcceEEEeccc
Confidence 9999999999999998654 346666677899999999999999 999999999999999776 67999999
Q ss_pred cccccccCCCCCcceecccCCcccCcccccCCC--C-CcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhh
Q 040242 505 GLARAYDHNINPQTTHIVGTLGYLAPELTRTGK--A-TTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHS 581 (662)
Q Consensus 505 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~-t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~ 581 (662)
|+|+..++. ......+||+.|.|||++.++. + ..+.|+||+||+||-+++|.+||........ + .++..
T Consensus 324 GlAK~~g~~--sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s--l----~eQI~ 395 (475)
T KOG0615|consen 324 GLAKVSGEG--SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS--L----KEQIL 395 (475)
T ss_pred chhhccccc--eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc--H----HHHHh
Confidence 999987643 3445579999999999997653 3 3488999999999999999999985543211 1 11111
Q ss_pred cCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 582 QGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 582 ~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.|+.. +. ........++.+.|+.+||..||++||++.|++++
T Consensus 396 ~G~y~--f~---p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 396 KGRYA--FG---PLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred cCccc--cc---ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 12110 00 12234567788999999999999999999999975
No 11
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4e-42 Score=377.48 Aligned_cols=260 Identities=28% Similarity=0.431 Sum_probs=216.8
Q ss_pred CCcccceeeeeCceEEEEEEeCC-----CCcEEEEEEeeccchh-hHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPS-----TGLEVAIKRVAHNSRQ-GMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~-----~g~~vavK~~~~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
+....+.||+|.||+||+|+..+ ....||||.++..... ..++|.+|++++..++|||||+|+|.|.+++.+++
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~M 566 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCM 566 (774)
T ss_pred heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEE
Confidence 34456789999999999998742 3367999999887555 78899999999999999999999999999999999
Q ss_pred EEeccCCCCcchhcccccccc---------cccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeE
Q 040242 430 VYDYVPNGSLDKLLFDNDQQK---------KKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPK 500 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~---------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 500 (662)
|+|||..|+|.++|....... ..+|+..+.+.||.|||.||.||-+ ..+|||||..+|+||.++..||
T Consensus 567 vFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~---~~FVHRDLATRNCLVge~l~VK 643 (774)
T KOG1026|consen 567 VFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSS---HHFVHRDLATRNCLVGENLVVK 643 (774)
T ss_pred EEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CcccccchhhhhceeccceEEE
Confidence 999999999999997543211 2348999999999999999999999 8999999999999999999999
Q ss_pred Eeeccccccc-cCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHH
Q 040242 501 LGDFGLARAY-DHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRE 578 (662)
Q Consensus 501 L~DfGla~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~ 578 (662)
|+||||++.. ..+.........-+.+||+||.+..+++|.+||||||||+|||+++ |+.|+.+....+.. +.
T Consensus 644 IsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVI---e~--- 717 (774)
T KOG1026|consen 644 ISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVI---EC--- 717 (774)
T ss_pred ecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHHH---HH---
Confidence 9999999853 2222222223345789999999999999999999999999999998 99999876554322 22
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 040242 579 LHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDA 633 (662)
Q Consensus 579 ~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~ 633 (662)
..+|+ +-..++.++.++..|++.||+.+|.+||+++||-..|..-.
T Consensus 718 -i~~g~--------lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~ 763 (774)
T KOG1026|consen 718 -IRAGQ--------LLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWA 763 (774)
T ss_pred -HHcCC--------cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHH
Confidence 22333 23456788899999999999999999999999999997543
No 12
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-42 Score=371.67 Aligned_cols=270 Identities=28% Similarity=0.472 Sum_probs=225.6
Q ss_pred cchHHHHHhccC---------CcccceeeeeCceEEEEEEeCCCC---cEEEEEEeecc-chhhHHHHHHHHHHhhcccc
Q 040242 345 FRYSELYSATKG---------FREKNLVGSGGFGKVYRGVIPSTG---LEVAIKRVAHN-SRQGMKEFVAEITSMGRLRH 411 (662)
Q Consensus 345 ~~~~el~~at~~---------f~~~~~LG~G~~g~Vy~~~~~~~g---~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H 411 (662)
++|+|-..|-.. ..+.++||.|.||.||+|.++..| ..||||.++.. .+....+|+.|+.+|.+..|
T Consensus 610 ~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdH 689 (996)
T KOG0196|consen 610 HTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDH 689 (996)
T ss_pred ccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCC
Confidence 567765555443 345789999999999999997655 56999999876 45567899999999999999
Q ss_pred ccceeeeeeEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCce
Q 040242 412 RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNV 491 (662)
Q Consensus 412 ~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NI 491 (662)
|||++|.|...+.+..++|.|||+||+|+.+|..+. ..+++-++.-++++||.||+||.+ .++|||||.++||
T Consensus 690 PNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~~D----GqftviQLVgMLrGIAsGMkYLsd---m~YVHRDLAARNI 762 (996)
T KOG0196|consen 690 PNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQND----GQFTVIQLVGMLRGIASGMKYLSD---MNYVHRDLAARNI 762 (996)
T ss_pred CcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhhcC----CceEeehHHHHHHHHHHHhHHHhh---cCchhhhhhhhhe
Confidence 999999999999999999999999999999997763 459999999999999999999999 8999999999999
Q ss_pred EeCCCCCeEEeeccccccccCCCCCcceeccc--CCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchh
Q 040242 492 LIDADLNPKLGDFGLARAYDHNINPQTTHIVG--TLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAM 568 (662)
Q Consensus 492 ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~g--t~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~ 568 (662)
|++.+..+|++||||+|.++++.....+..-| +.+|.|||.+...++|.++||||||++|||.++ |.+||......+
T Consensus 763 LVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQd 842 (996)
T KOG0196|consen 763 LVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD 842 (996)
T ss_pred eeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHH
Confidence 99999999999999999887665333332222 579999999999999999999999999999887 999997544322
Q ss_pred hHHHHHHHHHHhhcCccccccCCCC-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCCCC
Q 040242 569 ELVLVDWVRELHSQGQITRAIDPTL-DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDASLPQ 637 (662)
Q Consensus 569 ~~~l~~~~~~~~~~~~~~~~id~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~~p~ 637 (662)
. .+.++... -.-+++++..|.+|++.||+.|..+||++.+|+.+|.+...-|.
T Consensus 843 V----------------IkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~ 896 (996)
T KOG0196|consen 843 V----------------IKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPN 896 (996)
T ss_pred H----------------HHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCch
Confidence 1 12222222 12356788899999999999999999999999999987654443
No 13
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.4e-41 Score=329.31 Aligned_cols=264 Identities=27% Similarity=0.360 Sum_probs=211.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
+.|+...++|+|+||.|||++.+.+|+.||||++.... ....+-.++|+++|++++|+|+|.+++.|..++.++||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 34677889999999999999999999999999996543 3334556899999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
||+..-|+++= .. ...++.....+++.|+++|+.|+|+ ++++||||||+|||++.++.+||||||.|+.+..
T Consensus 82 ~~dhTvL~eLe-~~----p~G~~~~~vk~~l~Q~l~ai~~cHk---~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~ 153 (396)
T KOG0593|consen 82 YCDHTVLHELE-RY----PNGVPSELVKKYLYQLLKAIHFCHK---NNCIHRDIKPENILITQNGVVKLCDFGFARTLSA 153 (396)
T ss_pred ecchHHHHHHH-hc----cCCCCHHHHHHHHHHHHHHhhhhhh---cCeecccCChhheEEecCCcEEeccchhhHhhcC
Confidence 99775555543 32 3457888899999999999999999 8999999999999999999999999999998875
Q ss_pred CCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHH--------HHHhhcC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWV--------RELHSQG 583 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~~~~~~ 583 (662)
. ....+..+.|..|.|||.+-+ .+|....|||+.||++.||++|.+-|.+..+.++..++... .+.+...
T Consensus 154 p-gd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N 232 (396)
T KOG0593|consen 154 P-GDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSN 232 (396)
T ss_pred C-cchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccC
Confidence 3 345566788999999998877 68999999999999999999999999887776665543321 1222222
Q ss_pred ccc-cccCCCC------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 584 QIT-RAIDPTL------DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 584 ~~~-~~id~~l------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
... ...-|.. ....+.....+++++..|++.||++|++-+|++.
T Consensus 233 ~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 233 PFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred CceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111 1111211 1112233456889999999999999999999885
No 14
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-41 Score=338.28 Aligned_cols=243 Identities=26% Similarity=0.368 Sum_probs=203.7
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
.++|+..++||+|+||+||.++.+++++.+|+|++++.. ....+...+|..+|.+++||.||+++-.++..+.+|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 467999999999999999999999999999999997752 33456789999999999999999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
+||+.||.|..+|.+ ...+++....-.+..|+.||.|||+ .+|+||||||+|||||++|.++|+||||++..
T Consensus 104 ld~~~GGeLf~hL~~-----eg~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQR-----EGRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred EeccCCccHHHHHHh-----cCCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 999999999999954 3458888888889999999999999 99999999999999999999999999999964
Q ss_pred cCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
... ...+...+||+.|||||++.+..++..+|.||+|+++|||++|.+||...... .+...... ++
T Consensus 176 ~~~-~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~------~~~~~I~~-~k------ 241 (357)
T KOG0598|consen 176 LKD-GDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK------KMYDKILK-GK------ 241 (357)
T ss_pred ccC-CCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH------HHHHHHhc-Cc------
Confidence 433 23344479999999999999999999999999999999999999999876432 12211111 11
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCC
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRP 620 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP 620 (662)
+...+.-......+++.+.+..||++|-
T Consensus 242 --~~~~p~~ls~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 242 --LPLPPGYLSEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred --CCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence 1222222445567788899999999995
No 15
>cd01951 lectin_L-type legume lectins. The L-type (legume-type) lectins are a highly diverse family of carbohydrate binding proteins that generally display no enzymatic activity toward the sugars they bind. This family includes arcelin, concanavalinA, the lectin-like receptor kinases, the ERGIC-53/VIP36/EMP46 type1 transmembrane proteins, and an alpha-amylase inhibitor. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded sheet and homotetramers occur by a back-to-back association of these homodimers. Though L-type lectins exhibit both sequence and structural similarity to one another, their carbohydrate binding specificities differ widely.
Probab=100.00 E-value=6.4e-40 Score=327.11 Aligned_cols=205 Identities=29% Similarity=0.422 Sum_probs=172.3
Q ss_pred CCCeeEecceeeeC-CCeEEecCCCCCeeEEEEcCCceeecccccccccCCCCCceeeeeEEEEEEEEecCCCCCCCCce
Q 040242 30 QANLSLDGTAFVRK-DGILAVSNDQGRILGHAFYPSPLRFKQLSKYNINNNTISHTALTFSTNFVFSIVPKYPQLGGHGL 108 (662)
Q Consensus 30 ~~~~~l~G~a~~~~-~~~~~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGl 108 (662)
..+++++|+|.+.+ ++.|+||++..+++||+||++||++| ++|+|+|+|+|.+.. ..+||||
T Consensus 13 ~~~~~~~G~A~~~~~~~~l~Lt~~~~~~~G~~~~~~~i~~~----------------~~F~~~F~f~i~~~~-~~~gdG~ 75 (223)
T cd01951 13 QSNWQLNGSATLTTDSGVLRLTPDTGNQAGSAWYKTPIDLS----------------KDFTTTFKFYLGTKG-TNGADGI 75 (223)
T ss_pred hhhcEEcccEEecCCCCEEEECCCCCCcEEEEEECCcEecc----------------CCEEEEEEEEEeCCC-CCCCCcE
Confidence 35899999999975 78999999999999999999999998 469999999998864 5689999
Q ss_pred eEEEccCCCCCCCCcc--cccCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCeeEEecCCCcccc--cccccccccC
Q 040242 109 AFVLMSRKQPPSCLAN--QYLGLPNDTSNAKFSTRILAVEFDAVQNLELQDINDNHVGIDISSLISNI--SEPAAYYFSK 184 (662)
Q Consensus 109 aF~l~~~~~~~~~~~g--~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~--~~~~~~~~~~ 184 (662)
||+|+|....+.+.+| ++||+ ...++.+|||||||+|.+++||+.+|||||+|+..+.. ..+.++.
T Consensus 76 aF~l~~~~~~~~~~~g~~~~lG~-------~~~~~~~aVefDT~~N~~~~dp~~~higi~~n~~~~~~~~~~~~~~~--- 145 (223)
T cd01951 76 AFVLQNDPAGALGGGGGGGGLGY-------GGIGNSVAVEFDTYKNDDNNDPNGNHISIDVNGNGNNTALATSLGSA--- 145 (223)
T ss_pred EEEEecCCCCccccCCCCCccCc-------cccCCeEEEEEeccccCCCCCCCCCEEEEEcCCCCCCccccccccee---
Confidence 9999998755555555 78887 34567899999999999888999999999999997642 1111211
Q ss_pred CCCCCCCCcceeecCCCcEEEEEEEeCCCcEEEEEEccCCCCCCCCCeeeeecccccccccceEEeeeccCCcccceeEE
Q 040242 185 GSNINDDNISVVLKSGDPIQAWIDYNSQEMLINVTISPLGIPKPHRPLISYPIDLATVLDEYMYVGFSASTGLLTAFHNV 264 (662)
Q Consensus 185 ~~~~~~~~~~~~l~~g~~~~~~I~Y~~~~~~l~V~~~~~~~~~~~~~~ls~~vdL~~~l~~~~~vGFsastG~~~~~~~i 264 (662)
..+....+|+.++|||+|++.+++|+|++..... |..+.++.++||+..++++||||||||||...+.|+|
T Consensus 146 -------~~~~~~~~g~~~~v~I~Y~~~~~~L~v~l~~~~~--~~~~~l~~~~~l~~~~~~~~yvGFTAsTG~~~~~h~V 216 (223)
T cd01951 146 -------SLPNGTGLGNEHTVRITYDPTTNTLTVYLDNGST--LTSLDITIPVDLIQLGPTKAYFGFTASTGGLTNLHDI 216 (223)
T ss_pred -------eCCCccCCCCEEEEEEEEeCCCCEEEEEECCCCc--cccccEEEeeeecccCCCcEEEEEEcccCCCcceeEE
Confidence 0111222399999999999999999999986554 6678999999999999999999999999999999999
Q ss_pred ecceee
Q 040242 265 HGWSFK 270 (662)
Q Consensus 265 ~sW~f~ 270 (662)
++|+|+
T Consensus 217 ~~wsf~ 222 (223)
T cd01951 217 LNWSFT 222 (223)
T ss_pred EEEEec
Confidence 999996
No 16
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-40 Score=344.95 Aligned_cols=279 Identities=25% Similarity=0.357 Sum_probs=221.7
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEecc--CeeeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ--DELLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~lV 430 (662)
+.|+..++||+|.||.||||++..+|+.||+|++..+. .....-..+||.+|++|.||||++|.+...+. +.+|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 34666789999999999999999999999999997764 33345557999999999999999999988776 689999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
+|||++ +|.-++... .-.++..++..+++|+++||.|+|+ .+|+|||||.+|||||.+|.+||+|||||+.+
T Consensus 197 FeYMdh-DL~GLl~~p----~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSP----GVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred Eecccc-hhhhhhcCC----CcccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceeec
Confidence 999965 788877543 3568999999999999999999999 99999999999999999999999999999998
Q ss_pred cCCCCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHH-----hhcCc
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVREL-----HSQGQ 584 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~-----~~~~~ 584 (662)
........+..+-|..|.|||.+.+. .|+.+.|+||.||||.||++|++.+.+..+.++...+--+..- |...+
T Consensus 269 ~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 269 TPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred cCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhcccccc
Confidence 87766667777889999999988764 6999999999999999999999999987766655433222211 11111
Q ss_pred cc--cccCCCCCCCC-------HHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhcCCCCCCCCCCCC
Q 040242 585 IT--RAIDPTLDYFD-------PQEAELVLTLGLLCCDPHPDFRPSTRRVVQ--FLLRDASLPQAPLDIH 643 (662)
Q Consensus 585 ~~--~~id~~l~~~~-------~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~--~L~~~~~~p~~p~~~~ 643 (662)
+. ..+.+. ..+. .......++|+..+|..||++|.|+.++++ ++ ...|+|..|...+
T Consensus 349 LP~~~~~kp~-~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF-~t~p~~~~p~~Lp 416 (560)
T KOG0600|consen 349 LPHATIFKPQ-QPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF-TTEPLPCDPSSLP 416 (560)
T ss_pred CCcccccCCC-CcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccc-ccCCCCCCcccCC
Confidence 11 111111 1111 122345788899999999999999999996 34 5666666666644
No 17
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-41 Score=342.04 Aligned_cols=257 Identities=26% Similarity=0.435 Sum_probs=207.6
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccC--eeeEEEe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD--ELLLVYD 432 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~--~~~lV~E 432 (662)
.++...+.||+|.||+||++...++|...|||.+........+.+.+|+.+|++++|||||+++|.....+ .++++||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 34566789999999999999998889999999987764444677899999999999999999999854444 6999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCC-CCCeEEeecccccccc
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDA-DLNPKLGDFGLARAYD 511 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~DfGla~~~~ 511 (662)
|+++|+|.+++.+.. . .|++....+...||++||.|||+ ++|+||||||+||||+. ++.+||+|||+++...
T Consensus 97 y~~~GsL~~~~~~~g---~-~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYG---G-KLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKLE 169 (313)
T ss_pred ccCCCcHHHHHHHcC---C-CCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCccccccc
Confidence 999999999996653 2 69999999999999999999998 99999999999999999 7999999999999776
Q ss_pred C--CCCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccc
Q 040242 512 H--NINPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRA 588 (662)
Q Consensus 512 ~--~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 588 (662)
. ..........||+.|||||++..+ ...+++||||+||++.||+||++||...... .+++-..... .
T Consensus 170 ~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~-----~~~~~~ig~~-----~ 239 (313)
T KOG0198|consen 170 SKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE-----AEALLLIGRE-----D 239 (313)
T ss_pred cccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch-----HHHHHHHhcc-----C
Confidence 4 222234457899999999999854 3446999999999999999999999864111 1111111111 1
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 589 IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 589 id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
.-| .++........+++.+|+..+|.+|||+.+++++.--
T Consensus 240 ~~P---~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 240 SLP---EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred CCC---CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 112 3344466677888999999999999999999997543
No 18
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-41 Score=352.35 Aligned_cols=263 Identities=25% Similarity=0.424 Sum_probs=211.9
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
..+.+...+.||+|+||+||+|.+.+ .||||.+... ..+..+.|++|+..+++-||.||+-+.|||.+... .+|
T Consensus 390 p~~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIi 465 (678)
T KOG0193|consen 390 PPEEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AII 465 (678)
T ss_pred CHHHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eee
Confidence 33455667899999999999999954 4999999765 45577899999999999999999999999988877 999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
+.+|+|-+|..+||.. +..++..+.+.|++|||+|+.|||. ++|||||||+.||+|.++++|||+||||+...
T Consensus 466 TqwCeGsSLY~hlHv~----etkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 466 TQWCEGSSLYTHLHVQ----ETKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred ehhccCchhhhhccch----hhhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccceeee
Confidence 9999999999999876 4668999999999999999999999 99999999999999999999999999999754
Q ss_pred cCC-CCCcceecccCCcccCcccccC---CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccc
Q 040242 511 DHN-INPQTTHIVGTLGYLAPELTRT---GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQIT 586 (662)
Q Consensus 511 ~~~-~~~~~~~~~gt~~y~aPE~~~~---~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 586 (662)
..- .........|...|||||++.. ..+++.+||||||+|+|||+||..||.. ...++.. | .-|+
T Consensus 539 ~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~dqIi---f-----mVGr-- 607 (678)
T KOG0193|consen 539 TRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNRDQII---F-----MVGR-- 607 (678)
T ss_pred eeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CChhheE---E-----Eecc--
Confidence 321 1222333457889999998864 3689999999999999999999999983 3322221 1 0011
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC-CCC
Q 040242 587 RAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDAS-LPQ 637 (662)
Q Consensus 587 ~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~-~p~ 637 (662)
..+-+.+........+.+.+|...||..++++||.+.+|+..|+...+ +|.
T Consensus 608 G~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pk 659 (678)
T KOG0193|consen 608 GYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPK 659 (678)
T ss_pred cccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcccc
Confidence 111233323344567778888899999999999999999998877655 443
No 19
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=7.2e-40 Score=314.20 Aligned_cols=284 Identities=24% Similarity=0.341 Sum_probs=226.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh--hHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ--GMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~--~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
.+|...++||+|.||.||+|++..+|+.||||+++..... .....++|++.|++++|+||+.+++++-..+.+.||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4677789999999999999999999999999999765322 23467899999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|| ..+|+..+++. ...|+-.++..++.++++||+|||+ +.|+||||||.|+|++++|.+||+|||+++.+..
T Consensus 82 fm-~tdLe~vIkd~----~i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~ 153 (318)
T KOG0659|consen 82 FM-PTDLEVVIKDK----NIILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFGS 153 (318)
T ss_pred ec-cccHHHHhccc----ccccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccCC
Confidence 99 56999999766 5678889999999999999999999 8999999999999999999999999999999886
Q ss_pred CCCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhc---------
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQ--------- 582 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~--------- 582 (662)
...... ..+-|..|.|||.+.+. .|+...|+||.|||+.||+.|.+-|.+..+.++...+-.+-.....
T Consensus 154 p~~~~~-~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 154 PNRIQT-HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred CCcccc-cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccc
Confidence 544333 34779999999988664 6899999999999999999998888776665554432211111000
Q ss_pred ---CccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH-hcCCCCCCCCCCCCCCCC
Q 040242 583 ---GQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL-LRDASLPQAPLDIHHEFP 647 (662)
Q Consensus 583 ---~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L-~~~~~~p~~p~~~~~~~~ 647 (662)
.++.+.=.+.+...-.......++|+..++..||.+|+++.|++++= -+..|.|.+|.+.+.+..
T Consensus 233 pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt~~~~lp~p~~ 301 (318)
T KOG0659|consen 233 PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPTPPSKLPIPST 301 (318)
T ss_pred ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCCChhhCcCCcc
Confidence 01111111222223334455669999999999999999999999863 344888888888665554
No 20
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.9e-39 Score=389.90 Aligned_cols=268 Identities=28% Similarity=0.554 Sum_probs=221.2
Q ss_pred cchHHHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEecc
Q 040242 345 FRYSELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ 424 (662)
Q Consensus 345 ~~~~el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~ 424 (662)
++++++. ..|...++||+|+||.||+|+...++..||||++....... ..|++.+++++||||++++++|...
T Consensus 683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~----~~~~~~l~~l~HpnIv~~~~~~~~~ 755 (968)
T PLN00113 683 ITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSIP----SSEIADMGKLQHPNIVKLIGLCRSE 755 (968)
T ss_pred hhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcccc----HHHHHHHhhCCCCCcceEEEEEEcC
Confidence 4444444 45778889999999999999998889999999986543221 3468889999999999999999999
Q ss_pred CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 425 DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 425 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
+..++||||+++|+|.++++ .++|.++.+++.|+|+||+|||+.+.++|+||||||+||+++.++.+++. +
T Consensus 756 ~~~~lv~Ey~~~g~L~~~l~--------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~ 826 (968)
T PLN00113 756 KGAYLIHEYIEGKNLSEVLR--------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-L 826 (968)
T ss_pred CCCEEEEeCCCCCcHHHHHh--------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-e
Confidence 99999999999999999983 38999999999999999999997666899999999999999999988876 6
Q ss_pred cccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCc
Q 040242 505 GLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQ 584 (662)
Q Consensus 505 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 584 (662)
|........ ....++..|+|||++.+..++.++|||||||++|||+||+.|+..... ....+.+|++..+....
T Consensus 827 ~~~~~~~~~-----~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~ 900 (968)
T PLN00113 827 SLPGLLCTD-----TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSDCH 900 (968)
T ss_pred ccccccccC-----CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCccc
Confidence 655433211 223678999999999999999999999999999999999999864322 23346678877766666
Q ss_pred cccccCCCCC---CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 040242 585 ITRAIDPTLD---YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDAS 634 (662)
Q Consensus 585 ~~~~id~~l~---~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~ 634 (662)
....+|+.+. ..+..+..++.+++.+||+.+|++||+|+||++.|++...
T Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 901 LDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred hhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 6667777762 3455677788999999999999999999999999987644
No 21
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=8.7e-40 Score=347.79 Aligned_cols=262 Identities=24% Similarity=0.368 Sum_probs=204.8
Q ss_pred ccCCcccceeeeeCceEEEEEEeC-----CCCcEEEEEEeeccc-hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccC-
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIP-----STGLEVAIKRVAHNS-RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQD- 425 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~-----~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~- 425 (662)
.++|+..++||+|+||.||+|... ..+..||||++.... ....+.+.+|+.++.++ +||||++++++|...+
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG 85 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence 367888999999999999999752 345679999987543 33456789999999999 8999999999887644
Q ss_pred eeeEEEeccCCCCcchhccccccc--------------------------------------------------------
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQQ-------------------------------------------------------- 449 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~~-------------------------------------------------------- 449 (662)
..++||||+++|+|.+++......
T Consensus 86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (338)
T cd05102 86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD 165 (338)
T ss_pred ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence 689999999999999998643210
Q ss_pred -ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC-CcceecccCCcc
Q 040242 450 -KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN-PQTTHIVGTLGY 527 (662)
Q Consensus 450 -~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y 527 (662)
....+++.++..++.||++||.|||+ .+|+||||||+|||++.++.+||+|||+++....... .......++..|
T Consensus 166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y 242 (338)
T cd05102 166 LWKSPLTMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW 242 (338)
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc
Confidence 02358889999999999999999999 8999999999999999999999999999986533221 112223467889
Q ss_pred cCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHH
Q 040242 528 LAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLT 606 (662)
Q Consensus 528 ~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~ 606 (662)
+|||.+.+..++.++|||||||++|||++ |+.||........ + ......+.. .. .+......+.+
T Consensus 243 ~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~--~----~~~~~~~~~-----~~---~~~~~~~~l~~ 308 (338)
T cd05102 243 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEE--F----CQRLKDGTR-----MR---APENATPEIYR 308 (338)
T ss_pred cCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHH--H----HHHHhcCCC-----CC---CCCCCCHHHHH
Confidence 99999988889999999999999999997 9999975432211 1 111111111 11 11233456889
Q ss_pred HHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 607 LGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 607 l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
|+.+||+.||.+||++.|+++.|+..
T Consensus 309 li~~cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 309 IMLACWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHH
Confidence 99999999999999999999999864
No 22
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-41 Score=343.48 Aligned_cols=264 Identities=26% Similarity=0.381 Sum_probs=213.6
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh-hHHHHHHHHHHhhccc-cccceeeeeeEeccC-eeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ-GMKEFVAEITSMGRLR-HRNLVQLHGWCRKQD-ELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~-~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~-~~~lV~ 431 (662)
++|...++||.|.||+||+|+....|..||||++++.-.. ....=++|++.|++|+ ||||++|.+.+.+.+ .+++||
T Consensus 10 ~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVf 89 (538)
T KOG0661|consen 10 DRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVF 89 (538)
T ss_pred HHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeH
Confidence 5677789999999999999999999999999999765322 1223378999999998 999999999998888 999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||| ..+|.+++++. +..+++..+..|+.||++||+|+|. +|+.|||+||+|||+..+..+||+|||+||-..
T Consensus 90 E~M-d~NLYqLmK~R----~r~fse~~irnim~QilqGL~hiHk---~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 90 EFM-DCNLYQLMKDR----NRLFSESDIRNIMYQILQGLAHIHK---HGFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred Hhh-hhhHHHHHhhc----CCcCCHHHHHHHHHHHHHHHHHHHh---cCcccccCChhheEecccceeEecccccccccc
Confidence 999 56999999765 5789999999999999999999999 899999999999999999999999999999764
Q ss_pred CCCCCcceecccCCcccCcccc-cCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHH-----HhhcC-c
Q 040242 512 HNINPQTTHIVGTLGYLAPELT-RTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRE-----LHSQG-Q 584 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~-~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~-----~~~~~-~ 584 (662)
. .+..+..+.|..|.|||++ ..+.|+.+.|+|++|||++|+.+-++-|.+..+.++..-+--+-. -+.++ .
T Consensus 162 S--kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~ 239 (538)
T KOG0661|consen 162 S--KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYN 239 (538)
T ss_pred c--CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHH
Confidence 3 3566778899999999976 567899999999999999999999999988766555432111110 01110 1
Q ss_pred c--------ccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 585 I--------TRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 585 ~--------~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+ .+.....+...-+.......+|+.+|+.+||.+|||+.|++++
T Consensus 240 La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 240 LASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 1 1111122222223366778999999999999999999999985
No 23
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-39 Score=335.53 Aligned_cols=262 Identities=27% Similarity=0.436 Sum_probs=212.3
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
...+.++||+|-||.|.+++.. .+..||||.++... ....++|..|+++|.+++||||++++|.|..++.+++|+|||
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred heehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 4555788999999999999994 46899999998764 445689999999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC-C
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH-N 513 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~-~ 513 (662)
++|+|.++|..+.. ..+.-....+|+.|||.||+||.+ .+++||||.++|+|++.++++||+|||+++.+-. +
T Consensus 618 EnGDLnqFl~ahea---pt~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 618 ENGDLNQFLSAHEL---PTAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred hcCcHHHHHHhccC---cccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCC
Confidence 99999999977642 224556677899999999999999 8999999999999999999999999999994432 2
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHH--cCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVA--CGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ell--tG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
........+-+.+|||||.+..+++|.++|||+||+++||++ |...||.....+ ..++-..+.++.+.....
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e---~vven~~~~~~~~~~~~~--- 765 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE---QVVENAGEFFRDQGRQVV--- 765 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH---HHHHhhhhhcCCCCccee---
Confidence 223333455678999999999999999999999999999985 577888754322 222333333333221111
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
...+.-++..+.++++.||..+-.+||+++++..+|...
T Consensus 766 --l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 766 --LSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred --ccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 223455677888999999999999999999999998764
No 24
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-40 Score=336.38 Aligned_cols=268 Identities=26% Similarity=0.392 Sum_probs=204.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhh--ccccccceeeeeeEeccC----eee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMG--RLRHRNLVQLHGWCRKQD----ELL 428 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~--~l~H~niv~l~~~~~~~~----~~~ 428 (662)
...+..++||+|+||.||||++ .++.||||++.... .+.|.+|-.+.+ .++|+||++++++-.... +++
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~~---kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw 284 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQE---KQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW 284 (534)
T ss_pred CchhhHHHhhcCccceeehhhc--cCceeEEEecCHHH---HHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence 4455578899999999999999 56899999996544 456667766655 468999999999887665 899
Q ss_pred EEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcC------CCCEEeCCcCCCceEeCCCCCeEEe
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEEC------DQRVVHRDVKPSNVLIDADLNPKLG 502 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------~~~ivH~Dlkp~NIll~~~~~~kL~ 502 (662)
||+||.++|+|.++|. ...++|....+|+..+++||+|||++. +++|+|||||++||||..|+++.|+
T Consensus 285 LVt~fh~kGsL~dyL~------~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa 358 (534)
T KOG3653|consen 285 LVTEFHPKGSLCDYLK------ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA 358 (534)
T ss_pred EEeeeccCCcHHHHHH------hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee
Confidence 9999999999999995 457999999999999999999999864 5679999999999999999999999
Q ss_pred eccccccccCCCCC-cceecccCCcccCcccccCCC------CCcchhHHHHHHHHHHHHcCCCCCCc-ccchhhHHH--
Q 040242 503 DFGLARAYDHNINP-QTTHIVGTLGYLAPELTRTGK------ATTSTDVFGFGTLMLEVACGRRPIEP-QRTAMELVL-- 572 (662)
Q Consensus 503 DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~------~t~ksDV~S~Gvvl~elltG~~p~~~-~~~~~~~~l-- 572 (662)
|||||..+...... ..-..+||.+|||||++.+.. .-.+.||||+|.|||||++.....+. ..++.+..+
T Consensus 359 DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~ 438 (534)
T KOG3653|consen 359 DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEA 438 (534)
T ss_pred ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhH
Confidence 99999988765433 223378999999999997642 22468999999999999986654431 111111111
Q ss_pred -------HHHHHHHhhcCccccccCCCCC--CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCCCC
Q 040242 573 -------VDWVRELHSQGQITRAIDPTLD--YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDASLPQ 637 (662)
Q Consensus 573 -------~~~~~~~~~~~~~~~~id~~l~--~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~~p~ 637 (662)
.+-++.... .+...|.+. ......+..+.+.+..||+.||+.|-|+.=|.+++....-+.+
T Consensus 439 evG~hPt~e~mq~~VV----~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~ 508 (534)
T KOG3653|consen 439 EVGNHPTLEEMQELVV----RKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWE 508 (534)
T ss_pred HhcCCCCHHHHHHHHH----hhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCC
Confidence 112222221 122233331 1122567788999999999999999999999988877655544
No 25
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.4e-39 Score=334.95 Aligned_cols=253 Identities=25% Similarity=0.365 Sum_probs=205.0
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
.|+..+.||+|+||+||++....+++.||+|.+.... ......+.+|+.++++++|+||+++++++...+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3677899999999999999998899999999986542 2334567899999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|+++|+|..++.... ...+++..++.++.|++.||.|||+ .+|+||||||+|||+++++.+||+|||++.....
T Consensus 81 ~~~~g~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (285)
T cd05631 81 IMNGGDLKFHIYNMG---NPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPE 154 (285)
T ss_pred ecCCCcHHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCC
Confidence 999999998885432 3468999999999999999999999 8999999999999999999999999999987543
Q ss_pred CCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
.. ......||..|+|||++.+..++.++|||||||++|||++|+.||.......... . +..... ..
T Consensus 155 ~~--~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~--~-~~~~~~---------~~ 220 (285)
T cd05631 155 GE--TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKRE--E-VDRRVK---------ED 220 (285)
T ss_pred CC--eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHH--H-HHHHhh---------cc
Confidence 22 2233568999999999998899999999999999999999999998654321111 0 000000 00
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRPS-----TRRVVQF 628 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~eVl~~ 628 (662)
...+.......+..|+.+||+.||.+||+ +++++++
T Consensus 221 ~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 221 QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 11222334567888999999999999997 7888864
No 26
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-39 Score=340.32 Aligned_cols=251 Identities=26% Similarity=0.381 Sum_probs=207.1
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc----ch-hhHHHHHHHHHHhhccc-cccceeeeeeEeccCe
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN----SR-QGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQDE 426 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~----~~-~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~ 426 (662)
..++|...+.||+|.||+|++|....++..||+|.+... .. ...+.+.+|+.++++++ ||||++++.++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 446788999999999999999999999999999977553 11 23445668999999999 9999999999999999
Q ss_pred eeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC-CCeEEeecc
Q 040242 427 LLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD-LNPKLGDFG 505 (662)
Q Consensus 427 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~DfG 505 (662)
+++||||+.+|+|.+++.+ ...+.+.+...++.|++.|++|+|+ .+|+||||||+|||++.+ +++||+|||
T Consensus 95 ~~ivmEy~~gGdL~~~i~~-----~g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVN-----KGRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred EEEEEEecCCccHHHHHHH-----cCCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 9999999999999999965 3567888999999999999999999 899999999999999999 999999999
Q ss_pred ccccccCCCCCcceecccCCcccCcccccCCC-CC-cchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcC
Q 040242 506 LARAYDHNINPQTTHIVGTLGYLAPELTRTGK-AT-TSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQG 583 (662)
Q Consensus 506 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~t-~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~ 583 (662)
++.... .........+||+.|+|||++.+.. ++ .++||||+||+||.|++|+.||+...... + +..
T Consensus 167 ~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~---l-------~~k- 234 (370)
T KOG0583|consen 167 LSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPN---L-------YRK- 234 (370)
T ss_pred cccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHH---H-------HHH-
Confidence 999874 2223444568999999999998866 64 78999999999999999999999743211 1 111
Q ss_pred ccccccCCCCCCCCHHH-HHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 584 QITRAIDPTLDYFDPQE-AELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 584 ~~~~~id~~l~~~~~~~-~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+...--.++... ...+..|+.+|+..||.+|+++.+|+.+
T Consensus 235 -----i~~~~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 235 -----IRKGEFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred -----HhcCCccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 111111112222 6778899999999999999999999953
No 27
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=6.5e-39 Score=329.26 Aligned_cols=255 Identities=26% Similarity=0.407 Sum_probs=205.5
Q ss_pred cCCcccceeeeeCceEEEEEEeC---CCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIP---STGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~---~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
++|+..+.||+|+||.||+|.+. ..+..||+|.+.... ......|.+|+..+.+++||||+++++++..++..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 56888999999999999999874 346789999987653 33456789999999999999999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
|||+++|+|.+++... ...+++.+++.++.|++.||+|||+ .+++||||||+||+++.++.+|++|||.+...
T Consensus 85 ~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 85 TEYMSNGALDSFLRKH----EGQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred EEeCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 9999999999999643 2468999999999999999999999 89999999999999999999999999987653
Q ss_pred cCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCcccccc
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAI 589 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 589 (662)
............++..|+|||.+.+..++.++|||||||++||+++ |+.||....... +...+ .++.
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~---~~~~~----~~~~----- 225 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQD---VIKAV----EDGF----- 225 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHH----HCCC-----
Confidence 3221111112345678999999988899999999999999999775 999997543221 11111 1111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 590 DPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 590 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
. ...+...+..+.+++.+||+.+|.+||++.+|.+.|.+
T Consensus 226 ~---~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~ 264 (266)
T cd05064 226 R---LPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSK 264 (266)
T ss_pred C---CCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHh
Confidence 0 01123345678889999999999999999999999875
No 28
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-39 Score=326.48 Aligned_cols=260 Identities=27% Similarity=0.379 Sum_probs=209.4
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+.|+..+.||.|..++||+|.....++.||||++..+. ....+.+.+|+..++.++||||++++..|..+..+|+||.|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpf 105 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPF 105 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehh
Confidence 56888999999999999999998889999999997653 33368889999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
|.+||+.++++..- ...+++..+..|++++++||.|||+ ++.||||||+.||||+.+|.+||+|||.+-.+-..
T Consensus 106 Ma~GS~ldIik~~~---~~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 106 MAGGSLLDIIKTYY---PDGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred hcCCcHHHHHHHHc---cccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 99999999997654 4458899999999999999999999 89999999999999999999999999977655443
Q ss_pred CCCcc---eecccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccc
Q 040242 514 INPQT---THIVGTLGYLAPELTRT--GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRA 588 (662)
Q Consensus 514 ~~~~~---~~~~gt~~y~aPE~~~~--~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 588 (662)
..+.. ...+||+.|||||++.. ..|+.|+||||||+...||.+|..||....+- +..+. .+ ++.....
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm-kvLl~----tL--qn~pp~~ 252 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM-KVLLL----TL--QNDPPTL 252 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH-HHHHH----Hh--cCCCCCc
Confidence 32222 34689999999999643 35899999999999999999999999865432 11111 10 1111100
Q ss_pred cCCCC-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 589 IDPTL-DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 589 id~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
.-..+ .+........+.+++..||+.||++|||++++++
T Consensus 253 ~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 253 LTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 00011 1222334457889999999999999999999987
No 29
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=368.64 Aligned_cols=260 Identities=28% Similarity=0.455 Sum_probs=214.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCC-----cEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEeccCeee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTG-----LEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELL 428 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g-----~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 428 (662)
++.+..+.||+|.||.||+|...+.. ..||||.+.+. +.+...+|+.|..+|++++|||||+++|.|......+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 34455788999999999999985432 34999999776 5666789999999999999999999999999999999
Q ss_pred EEEeccCCCCcchhccccccc--ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccc
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQ--KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGL 506 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGl 506 (662)
+++|||++|+|..+|.+.+.. +...|+....+.++.|||+|+.||++ +++|||||.++|+||++...+||+||||
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccch
Confidence 999999999999999876332 24669999999999999999999999 8999999999999999999999999999
Q ss_pred cccc-cCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCc
Q 040242 507 ARAY-DHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQ 584 (662)
Q Consensus 507 a~~~-~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~ 584 (662)
|+.+ ..+.........-+..|||||.+..+.++.|+|||||||+|||++| |..||......+. +..|+. .|
T Consensus 849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v--~~~~~~----gg- 921 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV--LLDVLE----GG- 921 (1025)
T ss_pred hHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH--HHHHHh----CC-
Confidence 9943 3332222222344579999999999999999999999999999999 8889986654321 222221 22
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 585 ITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 585 ~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
+| ..+..+++.+.+|+..||+.+|++||++..+++.+...
T Consensus 922 -------RL-~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i 961 (1025)
T KOG1095|consen 922 -------RL-DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAI 961 (1025)
T ss_pred -------cc-CCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhh
Confidence 22 23456788899999999999999999999999987644
No 30
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=7.7e-40 Score=340.98 Aligned_cols=273 Identities=26% Similarity=0.389 Sum_probs=223.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
++|...+.||+|.||.||||+.+.+.+.||+|.+.+. .+...+.+.+|++++++++||||+.++++++...++++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 4677888999999999999999999999999999765 34456789999999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|+.+ +|..+|.+ ...|++++...++.++..||.|||+ .+|+|||+||+||||+.++.+|+||||+|+.+..
T Consensus 82 ~a~g-~L~~il~~-----d~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ-----DGKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred hhhh-hHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 9966 99999954 4569999999999999999999999 8999999999999999999999999999998876
Q ss_pred CCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
+ ....+.+.||+.|||||...++.++..+|.||+||++||+++|++||.... +.+.++.... ||.
T Consensus 153 ~-t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s------i~~Lv~~I~~--------d~v 217 (808)
T KOG0597|consen 153 N-TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS------ITQLVKSILK--------DPV 217 (808)
T ss_pred C-ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH------HHHHHHHHhc--------CCC
Confidence 4 345566789999999999999999999999999999999999999997432 2222222221 222
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhcCC---CCCCCCCCCCCCCCCCCCCC
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF--LLRDA---SLPQAPLDIHHEFPRAIPEF 653 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~--L~~~~---~~p~~p~~~~~~~~~~~~~~ 653 (662)
. .+......+..+..-.+..||.+|-+-.+++++ .++.. ..|..|.....-....||+.
T Consensus 218 ~--~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~~~~~~~~~~a~~spftn~~Ppe~ 281 (808)
T KOG0597|consen 218 K--PPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKINIAELPAQVAFDSPFTNNTPPEY 281 (808)
T ss_pred C--CcccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhhhhhcccccccccCccccCCChHH
Confidence 1 223555667788889999999999999999974 45443 33444444433344444533
No 31
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-39 Score=337.83 Aligned_cols=253 Identities=25% Similarity=0.384 Sum_probs=211.2
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeee
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELL 428 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~ 428 (662)
..++|...+.||+|+|++|++|+.+.+++.+|||++.+. .+...+-...|-..|.+| .||.|++|+-.+.+...+|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 346788899999999999999999999999999999665 222334567788889999 8999999999999999999
Q ss_pred EEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccc
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLAR 508 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~ 508 (662)
+|+||++||+|.++|+. ...+++...+..+.+|+.||.|||+ .+||||||||+|||||.|+++||+|||.|+
T Consensus 151 FvLe~A~nGdll~~i~K-----~Gsfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK 222 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKK-----YGSFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAK 222 (604)
T ss_pred EEEEecCCCcHHHHHHH-----hCcchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccc
Confidence 99999999999999954 3568888899999999999999999 999999999999999999999999999999
Q ss_pred cccCCCCC----------c--ceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHH
Q 040242 509 AYDHNINP----------Q--TTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWV 576 (662)
Q Consensus 509 ~~~~~~~~----------~--~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~ 576 (662)
.+...... . ....+||..|.+||++..+..++.+|+|+|||+||+|+.|++||.+..+- .+.+-+
T Consensus 223 ~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ney---liFqkI 299 (604)
T KOG0592|consen 223 ILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEY---LIFQKI 299 (604)
T ss_pred cCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHH---HHHHHH
Confidence 87542111 1 13478999999999999999999999999999999999999999876432 111111
Q ss_pred HHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 577 RELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 577 ~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
. .++ -.+++..++.+.+|+.+.|..||.+|++..+|-++.
T Consensus 300 ~----------~l~---y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 300 Q----------ALD---YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred H----------Hhc---ccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 1 111 123444557788899999999999999999988753
No 32
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-40 Score=342.09 Aligned_cols=240 Identities=24% Similarity=0.427 Sum_probs=202.7
Q ss_pred ccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCC
Q 040242 359 EKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGS 438 (662)
Q Consensus 359 ~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gs 438 (662)
+.+-||+|+.|.||+|++ .++.||||+++... ..+|+.|++|+|+||+.+.|+|.....+|||||||+.|-
T Consensus 128 ELeWlGSGaQGAVF~Grl--~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq 198 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRL--HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ 198 (904)
T ss_pred hhhhhccCcccceeeeec--cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeecccccc
Confidence 367899999999999999 46889999884432 257899999999999999999999999999999999999
Q ss_pred cchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcc
Q 040242 439 LDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQT 518 (662)
Q Consensus 439 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~ 518 (662)
|...|+.. ..+.-.....+.++||.||+|||. +.|||||||+-||||..+..+||+|||.++..... ...
T Consensus 199 L~~VLka~-----~~itp~llv~Wsk~IA~GM~YLH~---hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STk 268 (904)
T KOG4721|consen 199 LYEVLKAG-----RPITPSLLVDWSKGIAGGMNYLHL---HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STK 268 (904)
T ss_pred HHHHHhcc-----CccCHHHHHHHHHHhhhhhHHHHH---hhHhhhccCCCceEeeccceEEeccccchHhhhhh--hhh
Confidence 99999654 456777889999999999999999 89999999999999999999999999999865443 334
Q ss_pred eecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC-CCCC
Q 040242 519 THIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL-DYFD 597 (662)
Q Consensus 519 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l-~~~~ 597 (662)
...+||..|||||++.....++|.||||||||||||+||..||..-+.... +| .+-...| -..+
T Consensus 269 MSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI------Iw---------GVGsNsL~LpvP 333 (904)
T KOG4721|consen 269 MSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI------IW---------GVGSNSLHLPVP 333 (904)
T ss_pred hhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee------EE---------eccCCcccccCc
Confidence 457899999999999999999999999999999999999999975433210 11 1111222 2345
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 598 PQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 598 ~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
..+++-+.-|+++||+..|..||++++|+.+|.--
T Consensus 334 stcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 334 STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA 368 (904)
T ss_pred ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence 56777788889999999999999999999999643
No 33
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2e-38 Score=329.05 Aligned_cols=266 Identities=23% Similarity=0.313 Sum_probs=207.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
++|+..+.||+|+||.||++++..+++.||+|++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46888999999999999999998889999999987542 3345678899999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|++++.|..+... ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 81 YVEKNMLELLEEM-----PNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE 152 (287)
T ss_pred cCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence 9998877655421 3458899999999999999999999 8999999999999999999999999999987654
Q ss_pred CCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHH---------HHHHhhcC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDW---------VRELHSQG 583 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~---------~~~~~~~~ 583 (662)
..........|++.|+|||++.+..++.++|||||||++|||++|+.||.............. ........
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07848 153 GSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNP 232 (287)
T ss_pred cccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccc
Confidence 333333445789999999999888899999999999999999999999976543222111111 11111111
Q ss_pred ccccccCCCCC-------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 584 QITRAIDPTLD-------YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 584 ~~~~~id~~l~-------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.......+... .+.......+.+++.+||+.||++|||++|++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 233 RFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred hhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 11111111110 0111234568999999999999999999999863
No 34
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-39 Score=339.98 Aligned_cols=251 Identities=26% Similarity=0.379 Sum_probs=213.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
..|...++||+|..|.||.+....++..||||++........+-+++|+.+|+..+|+|||++++.+..++++++|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 34666788999999999999999999999999998776666677899999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++|+|.+.+. ...+++.++..|+.++++||+|||. ++|+|||||.+||||+.++++||+|||++..+....
T Consensus 353 ~ggsLTDvVt------~~~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 353 EGGSLTDVVT------KTRMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred CCCchhhhhh------cccccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 9999999984 3458999999999999999999999 999999999999999999999999999998876554
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
. .....+||+.|||||+.....|.+|.||||||++++||+-|.+||-...+.-...++ ...--|.+.
T Consensus 424 ~-KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLI------------a~ng~P~lk 490 (550)
T KOG0578|consen 424 S-KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI------------ATNGTPKLK 490 (550)
T ss_pred C-ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHH------------hhcCCCCcC
Confidence 3 444568999999999999999999999999999999999999999864332111111 111123331
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
........+.++..+||+.|+++||++.|+|++
T Consensus 491 -~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 491 -NPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred -CccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 233455678889999999999999999999984
No 35
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.5e-38 Score=331.49 Aligned_cols=266 Identities=24% Similarity=0.381 Sum_probs=205.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCC----------------CCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPS----------------TGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQL 417 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~----------------~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l 417 (662)
++|...++||+|+||.||++.+.. .+..||+|.+... ......+|.+|+.++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 467888999999999999998632 3447999998764 33445689999999999999999999
Q ss_pred eeeEeccCeeeEEEeccCCCCcchhcccccc--------------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEe
Q 040242 418 HGWCRKQDELLLVYDYVPNGSLDKLLFDNDQ--------------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVH 483 (662)
Q Consensus 418 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~--------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 483 (662)
++++...+..++||||+++|+|.+++..... .....++|.++++++.||+.||.|||+ .+|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCccc
Confidence 9999999999999999999999998854321 112457899999999999999999999 89999
Q ss_pred CCcCCCceEeCCCCCeEEeeccccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc--CCCC
Q 040242 484 RDVKPSNVLIDADLNPKLGDFGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC--GRRP 560 (662)
Q Consensus 484 ~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt--G~~p 560 (662)
|||||+|||++.++.+||+|||+++....... .......++..|+|||++..+.++.++|||||||++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999986543221 11223345789999999988889999999999999999987 5566
Q ss_pred CCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 561 IEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 561 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
|...... .....+...+........ ...++..+..+.+|+.+||+.+|.+||++.+|.+.|+.
T Consensus 242 ~~~~~~~---~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 242 YGELTDE---QVIENAGEFFRDQGRQVY-----LFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCcCCHH---HHHHHHHHHhhhcccccc-----ccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 6643221 122223222221110000 11122345678899999999999999999999999863
No 36
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-38 Score=328.27 Aligned_cols=246 Identities=17% Similarity=0.270 Sum_probs=199.4
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh---hHHHHHHHHHHhhccccccceeeeeeEec----cCeeeEEEe
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ---GMKEFVAEITSMGRLRHRNLVQLHGWCRK----QDELLLVYD 432 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~---~~~~f~~Ei~~l~~l~H~niv~l~~~~~~----~~~~~lV~E 432 (662)
...||+|+++.||+|.+ +|+.||||++...... ..+.|.+|+.++++++||||+++++++.+ ....++|||
T Consensus 25 ~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E 102 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE 102 (283)
T ss_pred CeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence 46899999999999998 6889999999765322 25778899999999999999999999876 346899999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|+++|+|.+++... ..++|...++++.+++.||.|||+. .+++||||||+||++++++.+||+|||+++....
T Consensus 103 y~~~g~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~ 175 (283)
T PHA02988 103 YCTRGYLREVLDKE-----KDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSS 175 (283)
T ss_pred eCCCCcHHHHHhhC-----CCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhcc
Confidence 99999999999543 4688999999999999999999973 4788999999999999999999999999986543
Q ss_pred CCCCcceecccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRT--GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~--~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
.. ....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||....... +...+ ...+ ..
T Consensus 176 ~~----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~---~~~~i---~~~~-----~~ 240 (283)
T PHA02988 176 PP----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE---IYDLI---INKN-----NS 240 (283)
T ss_pred cc----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH---HHHHH---HhcC-----CC
Confidence 21 22457899999999876 678999999999999999999999998553221 11111 1110 01
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
+. .+......+.+++.+||+.||++|||+.|+++.|+..
T Consensus 241 ~~---~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 241 LK---LPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred CC---CCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 11 1223456788999999999999999999999999764
No 37
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.8e-38 Score=337.01 Aligned_cols=253 Identities=26% Similarity=0.369 Sum_probs=207.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|+||.||+|....+++.||||++.... ....+.+..|+.++.+++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 46888999999999999999998889999999997642 234567889999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++|+|.+++.. ...+++.+...++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 81 e~~~g~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~ 152 (333)
T cd05600 81 EYVPGGDFRTLLNN-----LGVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIV 152 (333)
T ss_pred eCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCcccc
Confidence 99999999999953 3458899999999999999999999 899999999999999999999999999998654
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH-HHHHHHHHhhcCccccccC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV-LVDWVRELHSQGQITRAID 590 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~~~~~~~~~~~~~id 590 (662)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......... +..| .... -.
T Consensus 153 ~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~-------~~~~--~~ 219 (333)
T cd05600 153 T----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYW-------KETL--QR 219 (333)
T ss_pred c----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhc-------cccc--cC
Confidence 3 2234578999999999998899999999999999999999999997654322111 1111 0000 01
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+............+.+++.+||..+|.+||++.+++++
T Consensus 220 ~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 220 PVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 11111112345667889999999999999999999976
No 38
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.8e-38 Score=325.21 Aligned_cols=255 Identities=25% Similarity=0.385 Sum_probs=208.4
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
.+|...+.||+|++|.||+|.....+..|++|.+.... ...+++.+|++++++++|+||+++++++...+..+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 34777889999999999999998889999999987543 34567899999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.... ...+++..++.++.|+++||+|||+ .+++||||||+||++++++.+||+|||+++......
T Consensus 85 ~~~~L~~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~ 158 (263)
T cd05052 85 TYGNLLDYLRECN---RQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 158 (263)
T ss_pred CCCcHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence 9999999986442 3568999999999999999999999 899999999999999999999999999998765432
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
........++..|+|||.+.+..++.++|||||||++|||++ |..|+....... .... ...+ ..+
T Consensus 159 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~------~~~~-~~~~-----~~~-- 224 (263)
T cd05052 159 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ------VYEL-LEKG-----YRM-- 224 (263)
T ss_pred eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH------HHHH-HHCC-----CCC--
Confidence 222222334678999999988899999999999999999998 889987543211 1111 1111 111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
..+...+..+.+++.+||+.+|++||++.++++.|+.
T Consensus 225 -~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 225 -ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred -CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 1122344678889999999999999999999999875
No 39
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-39 Score=344.62 Aligned_cols=259 Identities=27% Similarity=0.369 Sum_probs=210.6
Q ss_pred cccceeeeeCceEEEEEEeCCCCc---E-EEEEEeec---cchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 358 REKNLVGSGGFGKVYRGVIPSTGL---E-VAIKRVAH---NSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 358 ~~~~~LG~G~~g~Vy~~~~~~~g~---~-vavK~~~~---~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
...++||+|.||.||+|.+...+. . ||||.... ..+...++|.+|++++++++|||||+++|++.....+++|
T Consensus 160 ~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~iv 239 (474)
T KOG0194|consen 160 ELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLV 239 (474)
T ss_pred cccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEE
Confidence 345899999999999999965422 3 89999875 3477789999999999999999999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
||+|+||+|+++|... ...++..+++.++.+.|+||+|||+ .+++||||-++|+|++.+..+||+||||++.-
T Consensus 240 mEl~~gGsL~~~L~k~----~~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~ 312 (474)
T KOG0194|consen 240 MELCNGGSLDDYLKKN----KKSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSRAG 312 (474)
T ss_pred EEecCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCccccccCC
Confidence 9999999999999655 2369999999999999999999999 89999999999999999999999999998864
Q ss_pred cCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHH-HHHhhcCccccc
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWV-RELHSQGQITRA 588 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~-~~~~~~~~~~~~ 588 (662)
.. .........-+..|+|||.+..+.+++++|||||||++||+++ |..||.+.... .+..++ ...++
T Consensus 313 ~~-~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~---~v~~kI~~~~~r------- 381 (474)
T KOG0194|consen 313 SQ-YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY---EVKAKIVKNGYR------- 381 (474)
T ss_pred cc-eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH---HHHHHHHhcCcc-------
Confidence 31 1111112235689999999999999999999999999999999 88898765432 222222 11111
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCCCCCC
Q 040242 589 IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDASLPQAP 639 (662)
Q Consensus 589 id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~~p~~p 639 (662)
...+...+..+..++.+||..+|++||+|.+|.+.|+........+
T Consensus 382 -----~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~~ 427 (474)
T KOG0194|consen 382 -----MPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEAF 427 (474)
T ss_pred -----CCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccccc
Confidence 1122355666777888999999999999999999998765555543
No 40
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=2.2e-38 Score=327.91 Aligned_cols=259 Identities=28% Similarity=0.459 Sum_probs=209.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCC-----cEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTG-----LEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELL 428 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g-----~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 428 (662)
++|+..+.||+|+||.||+|.....+ ..|++|.+.... .....+|.+|+..+.+++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 45778899999999999999986544 679999986543 344567899999999999999999999999989999
Q ss_pred EEEeccCCCCcchhcccccccc-----------cccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCC
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQK-----------KKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADL 497 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~ 497 (662)
++|||+++++|.+++....... ...+++.+++.++.|++.||.|||+ .+++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCC
Confidence 9999999999999996542111 1568899999999999999999999 8999999999999999999
Q ss_pred CeEEeeccccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHH
Q 040242 498 NPKLGDFGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDW 575 (662)
Q Consensus 498 ~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~ 575 (662)
.+||+|||+++....... .......+++.|+|||.+.++.++.++|||||||++|||++ |..||...... .+...
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~---~~~~~ 238 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ---EVIEM 238 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHH
Confidence 999999999986533221 12233456789999999988889999999999999999998 99998754332 11111
Q ss_pred HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 576 VRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 576 ~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
+. .+. ....+...+..+.+|+.+||+.||.+||++.||+++|++
T Consensus 239 i~----~~~--------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 239 IR----SRQ--------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HH----cCC--------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11 111 112233456778899999999999999999999999975
No 41
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=8.4e-39 Score=333.06 Aligned_cols=246 Identities=24% Similarity=0.282 Sum_probs=203.4
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|+||.||++....+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 36888999999999999999998889999999986542 234566889999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++|+|.+++.. ...+++.....++.|++.||+|||+ .+++||||||+|||++.++.+||+|||+++...
T Consensus 81 e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~ 152 (291)
T cd05612 81 EYVPGGELFSYLRN-----SGRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR 152 (291)
T ss_pred eCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhcc
Confidence 99999999999853 3458889999999999999999999 899999999999999999999999999998654
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
.. .....|++.|+|||.+.+..++.++|||||||++|||++|+.||....... +...+ ..+. .
T Consensus 153 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~---~~~~i----~~~~------~ 215 (291)
T cd05612 153 DR----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG---IYEKI----LAGK------L 215 (291)
T ss_pred CC----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHH----HhCC------c
Confidence 32 223468999999999988889999999999999999999999997653221 11111 1111 0
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPS-----TRRVVQF 628 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~eVl~~ 628 (662)
.++......+.+++.+||+.||.+||+ +++++++
T Consensus 216 ---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 216 ---EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ---CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 112223456788999999999999995 8888765
No 42
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6.9e-39 Score=327.94 Aligned_cols=250 Identities=35% Similarity=0.577 Sum_probs=195.9
Q ss_pred ccceeeeeCceEEEEEEeC----CCCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 359 EKNLVGSGGFGKVYRGVIP----STGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 359 ~~~~LG~G~~g~Vy~~~~~----~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
..+.||.|.||.||+|.+. ..+..|+||.+... ..+..++|.+|++.+++++||||++++|+|...+..++||||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 3578999999999999996 34678999999654 344578999999999999999999999999988889999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++|+|.++|.... ...+++.+++.++.||++||.|||+ .+++|++|+++||+++.++.+||+|||+++.....
T Consensus 83 ~~~g~L~~~L~~~~---~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 83 CPGGSLDDYLKSKN---KEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp -TTEBHHHHHHHTC---TTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred cccccccccccccc---ccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccccc
Confidence 99999999997652 4568999999999999999999999 89999999999999999999999999999876322
Q ss_pred CC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 514 IN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 514 ~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
.. ...........|+|||.+....++.++||||||+++|||++ |+.|+...... . ..... .++..
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~---~---~~~~~-~~~~~------ 223 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE---E---IIEKL-KQGQR------ 223 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH---H---HHHHH-HTTEE------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc---c---ccccc-ccccc------
Confidence 11 11222356789999999988889999999999999999999 67888655321 1 11111 11111
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
...+......+..++.+||+.+|.+||+++++++.|
T Consensus 224 --~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 --LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp --TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred --ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 111223456688999999999999999999999986
No 43
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.1e-38 Score=337.22 Aligned_cols=243 Identities=26% Similarity=0.356 Sum_probs=200.0
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG 437 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 437 (662)
+.||+|+||.||+++...+|+.||+|++.... ......+..|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999998899999999997642 334467889999999999999999999999999999999999999
Q ss_pred CcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCc
Q 040242 438 SLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQ 517 (662)
Q Consensus 438 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~ 517 (662)
+|.+++.. ...+++.+...++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 ~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~ 151 (323)
T cd05571 81 ELFFHLSR-----ERVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GAT 151 (323)
T ss_pred cHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCc
Confidence 99998853 3468899999999999999999999 89999999999999999999999999998753221 122
Q ss_pred ceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCC
Q 040242 518 TTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFD 597 (662)
Q Consensus 518 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 597 (662)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||....... +...+. .+ +. .++
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~---~~~~~~----~~------~~---~~p 215 (323)
T cd05571 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEK---LFELIL----ME------EI---RFP 215 (323)
T ss_pred ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHH---HHHHHH----cC------CC---CCC
Confidence 334579999999999998889999999999999999999999997543211 111110 11 11 112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 040242 598 PQEAELVLTLGLLCCDPHPDFRP-----STRRVVQF 628 (662)
Q Consensus 598 ~~~~~~l~~l~~~Cl~~dP~~RP-----t~~eVl~~ 628 (662)
......+.+++.+||+.||++|| ++.+++++
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 23455678899999999999999 79998863
No 44
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=2.5e-38 Score=341.33 Aligned_cols=261 Identities=23% Similarity=0.361 Sum_probs=205.6
Q ss_pred cCCcccceeeeeCceEEEEEEe-----CCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVI-----PSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDEL 427 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~-----~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~ 427 (662)
++|+..+.||+|+||.||+|.. ..++..||||++.... ....+.+.+|+.++..+ +||||++++++|...+..
T Consensus 35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~ 114 (375)
T cd05104 35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPT 114 (375)
T ss_pred HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcc
Confidence 4688899999999999999974 2456689999986542 33456788999999999 899999999999999999
Q ss_pred eEEEeccCCCCcchhccccccc----------------------------------------------------------
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQ---------------------------------------------------------- 449 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~---------------------------------------------------------- 449 (662)
++||||+++|+|.+++......
T Consensus 115 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (375)
T cd05104 115 LVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSY 194 (375)
T ss_pred eeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccccee
Confidence 9999999999999998643210
Q ss_pred ------------ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCc
Q 040242 450 ------------KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQ 517 (662)
Q Consensus 450 ------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~ 517 (662)
....++|..+++++.||++||.|||+ .+|+||||||+|||++.++.+||+|||+++.........
T Consensus 195 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~ 271 (375)
T cd05104 195 IDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYV 271 (375)
T ss_pred cccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCccccc
Confidence 01258899999999999999999999 899999999999999999999999999998664432211
Q ss_pred -ceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCC
Q 040242 518 -TTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDY 595 (662)
Q Consensus 518 -~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 595 (662)
.....++..|+|||.+.+..++.++|||||||++|||++ |..||....... .+..++.. +. .+.
T Consensus 272 ~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~--~~~~~~~~----~~-----~~~--- 337 (375)
T cd05104 272 VKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS--KFYKMIKE----GY-----RML--- 337 (375)
T ss_pred ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH--HHHHHHHh----Cc-----cCC---
Confidence 122345678999999998899999999999999999998 888886543221 12222211 11 000
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 596 FDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 596 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
.+......+.+|+.+||+.||++||++.||++.|++.
T Consensus 338 ~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 338 SPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 0111235688999999999999999999999999863
No 45
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.2e-37 Score=330.56 Aligned_cols=262 Identities=23% Similarity=0.324 Sum_probs=207.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
++|+..+.||+|+||.||+++...++..+|+|.+.... ....+.+.+|++++++++||||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred ccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 67888999999999999999999899999999987653 34456799999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++... ..+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 85 MDGGSLDQVLKEA-----KRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred CCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 9999999998542 4588999999999999999999982 46999999999999999999999999999865432
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCc--c------
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQ--I------ 585 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~--~------ 585 (662)
......|+..|+|||.+.+..++.++|||||||++|||++|+.||....... +...+......+. .
T Consensus 158 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 231 (331)
T cd06649 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKE---LEAIFGRPVVDGEEGEPHSISP 231 (331)
T ss_pred ---ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHhcccccccccCCccccCc
Confidence 2233468999999999998889999999999999999999999996543211 1111110000000 0
Q ss_pred -------------------------cc-ccCCCC-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 586 -------------------------TR-AIDPTL-DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 586 -------------------------~~-~id~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
.+ .+.... ..........+.+++.+||+.||++|||++|++++-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~ 302 (331)
T cd06649 232 RPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHT 302 (331)
T ss_pred ccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcCh
Confidence 00 000000 000112345688999999999999999999999863
No 46
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=337.09 Aligned_cols=246 Identities=23% Similarity=0.295 Sum_probs=203.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|+||.||+|....+++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 56888999999999999999999899999999997542 234567889999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++|+|.+++... ..+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 98 e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 169 (329)
T PTZ00263 98 EFVVGGELFTHLRKA-----GRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP 169 (329)
T ss_pred cCCCCChHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence 999999999998542 457888889999999999999999 899999999999999999999999999998654
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
.. .....||+.|+|||.+.+..++.++|||||||++|||++|+.||....... .. +....+..
T Consensus 170 ~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---~~----~~i~~~~~------ 232 (329)
T PTZ00263 170 DR----TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFR---IY----EKILAGRL------ 232 (329)
T ss_pred CC----cceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHH---HH----HHHhcCCc------
Confidence 32 223578999999999998889999999999999999999999997543211 11 11111110
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPS-----TRRVVQF 628 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~eVl~~ 628 (662)
. ++......+.+++.+||+.||.+||+ +++++++
T Consensus 233 ~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 233 K---FPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred C---CCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 1 11123355778999999999999997 6888754
No 47
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=3.6e-38 Score=333.36 Aligned_cols=243 Identities=26% Similarity=0.348 Sum_probs=198.8
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG 437 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 437 (662)
+.||+|+||.||++....+|..||+|++.... ......+..|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999998899999999997642 334566788999999999999999999999999999999999999
Q ss_pred CcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCc
Q 040242 438 SLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQ 517 (662)
Q Consensus 438 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~ 517 (662)
+|..++.. ...+++.....++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~ 151 (323)
T cd05595 81 ELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG-AT 151 (323)
T ss_pred cHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCCC-Cc
Confidence 99988843 3458899999999999999999999 899999999999999999999999999987532221 12
Q ss_pred ceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCC
Q 040242 518 TTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFD 597 (662)
Q Consensus 518 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 597 (662)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......... . ... ... .. .+
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~---~---~~~-~~~------~~---~p 215 (323)
T cd05595 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF---E---LIL-MEE------IR---FP 215 (323)
T ss_pred cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHH---H---HHh-cCC------CC---CC
Confidence 23356899999999999889999999999999999999999999754322111 0 000 000 11 12
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 040242 598 PQEAELVLTLGLLCCDPHPDFRP-----STRRVVQF 628 (662)
Q Consensus 598 ~~~~~~l~~l~~~Cl~~dP~~RP-----t~~eVl~~ 628 (662)
......+.+++.+||+.||++|| ++.+++++
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 216 RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 23345678899999999999998 89988763
No 48
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=5e-38 Score=320.45 Aligned_cols=252 Identities=26% Similarity=0.409 Sum_probs=203.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..+.||+|+||.||++... .+..+|+|.+.... ...++|.+|+.++++++||||+++++++...+..++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 45777889999999999999885 45689999886442 33467899999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++|+|.+++... ...++|..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05114 82 ENGCLLNYLRQR----QGKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDE 154 (256)
T ss_pred CCCcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCc
Confidence 999999998643 2358999999999999999999999 899999999999999999999999999998654332
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||...... .....+.+ +. ....
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~---~~~~~i~~----~~--~~~~--- 222 (256)
T cd05114 155 YTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNY---EVVEMISR----GF--RLYR--- 222 (256)
T ss_pred eeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHHC----CC--CCCC---
Confidence 222222345678999999988889999999999999999999 89998754321 11112111 11 0011
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
+......+.+++.+||+.+|++||++.++++.|.
T Consensus 223 ---~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~ 256 (256)
T cd05114 223 ---PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256 (256)
T ss_pred ---CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1123356889999999999999999999999873
No 49
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=4.4e-38 Score=333.35 Aligned_cols=243 Identities=26% Similarity=0.349 Sum_probs=199.7
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG 437 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 437 (662)
++||+|+||.||++....++..||+|++.... ......+.+|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999998899999999997642 334567889999999999999999999999999999999999999
Q ss_pred CcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCc
Q 040242 438 SLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQ 517 (662)
Q Consensus 438 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~ 517 (662)
+|..++.. ...+++.+...++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++..... ...
T Consensus 81 ~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~ 151 (328)
T cd05593 81 ELFFHLSR-----ERVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AAT 151 (328)
T ss_pred CHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCc-ccc
Confidence 99988853 3458899999999999999999999 89999999999999999999999999998753322 112
Q ss_pred ceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCC
Q 040242 518 TTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFD 597 (662)
Q Consensus 518 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 597 (662)
.....||+.|+|||.+.+..++.++|||||||++|||++|+.||........ ..... .. +.. ++
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~------~~~~~-~~------~~~---~p 215 (328)
T cd05593 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL------FELIL-ME------DIK---FP 215 (328)
T ss_pred cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHH------HHHhc-cC------Ccc---CC
Confidence 2335799999999999888899999999999999999999999975432211 11100 00 111 12
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 040242 598 PQEAELVLTLGLLCCDPHPDFRP-----STRRVVQF 628 (662)
Q Consensus 598 ~~~~~~l~~l~~~Cl~~dP~~RP-----t~~eVl~~ 628 (662)
......+.+++.+||+.||++|| ++.+++++
T Consensus 216 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 216 RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 23345678899999999999997 89999875
No 50
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5.3e-38 Score=328.02 Aligned_cols=253 Identities=26% Similarity=0.378 Sum_probs=206.5
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
..++|+..++||+|+||.||+++-+.+|..+|+|++.+.. ..+.+..++|-.+|....+|+||+|+-.|.+.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4578999999999999999999999999999999998763 4455678899999999999999999999999999999
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
||||++||++..+|.. ...|+.......+.+++.|+..||+ .++|||||||+|+|||..|.+||+||||+.-
T Consensus 219 iMEylPGGD~mTLL~~-----~~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~g 290 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMR-----KDTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDFGLSTG 290 (550)
T ss_pred EEEecCCccHHHHHHh-----cCcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccccccch
Confidence 9999999999999954 4678999999999999999999999 9999999999999999999999999999953
Q ss_pred ccC---------------C-------CCC-----c-------------------ceecccCCcccCcccccCCCCCcchh
Q 040242 510 YDH---------------N-------INP-----Q-------------------TTHIVGTLGYLAPELTRTGKATTSTD 543 (662)
Q Consensus 510 ~~~---------------~-------~~~-----~-------------------~~~~~gt~~y~aPE~~~~~~~t~ksD 543 (662)
+.. . ... . ....+|||.|+|||++.+..++..+|
T Consensus 291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cD 370 (550)
T KOG0605|consen 291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECD 370 (550)
T ss_pred hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcccc
Confidence 311 0 000 0 01246999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCcccchhh-HHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCC-
Q 040242 544 VFGFGTLMLEVACGRRPIEPQRTAME-LVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPS- 621 (662)
Q Consensus 544 V~S~Gvvl~elltG~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt- 621 (662)
.||+|||+|||+.|.+||....+... ..+..|...+.. |. ......+..+||.+|+. ||.+|--
T Consensus 371 wWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~f---------P~----~~~~s~eA~DLI~rll~-d~~~RLG~ 436 (550)
T KOG0605|consen 371 WWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKF---------PE----EVDLSDEAKDLITRLLC-DPENRLGS 436 (550)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccC---------CC----cCcccHHHHHHHHHHhc-CHHHhcCc
Confidence 99999999999999999987655432 234444322110 11 11122567788888998 9999976
Q ss_pred --HHHHHH
Q 040242 622 --TRRVVQ 627 (662)
Q Consensus 622 --~~eVl~ 627 (662)
+.||-+
T Consensus 437 ~G~~EIK~ 444 (550)
T KOG0605|consen 437 KGAEEIKK 444 (550)
T ss_pred ccHHHHhc
Confidence 444443
No 51
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-38 Score=306.04 Aligned_cols=237 Identities=24% Similarity=0.346 Sum_probs=200.4
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch---hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR---QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
.+|+..+.||.|+||.|.+.+.+.+|..+|+|++.+... .+.+...+|..+|+.+.||+++++++.|.+.+.+++||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 457788999999999999999999999999999987643 33456789999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||++||.|..+|++. ..++.+..+-.+.||+.||.|||+ ..|++|||||+|||||.+|.+||+|||.|+...
T Consensus 124 eyv~GGElFS~Lrk~-----~rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~ 195 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKS-----GRFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS 195 (355)
T ss_pred eccCCccHHHHHHhc-----CCCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEec
Confidence 999999999999543 468889999999999999999999 899999999999999999999999999999764
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
. .+...+||+.|+|||.+..+.+..++|.|+|||++|||++|.+||....+.. +.+ +++..
T Consensus 196 ~----rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~---iY~------------KI~~~ 256 (355)
T KOG0616|consen 196 G----RTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQ---IYE------------KILEG 256 (355)
T ss_pred C----cEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHH---HHH------------HHHhC
Confidence 3 3667899999999999999999999999999999999999999998765421 110 11111
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCC
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFR 619 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~R 619 (662)
.+ .++.-....+.+|+...++.|-.+|
T Consensus 257 ~v-~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 257 KV-KFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred cc-cCCcccCHHHHHHHHHHHhhhhHhh
Confidence 11 1233334456677778888888888
No 52
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-38 Score=338.23 Aligned_cols=256 Identities=25% Similarity=0.341 Sum_probs=212.2
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
|+..+-||+|+-|.|-.|++..+|+.+|||++.+.. ......+.+|+-+|+.+.|||++++++.++.+.++|+|.||
T Consensus 14 wkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEy 93 (786)
T KOG0588|consen 14 WKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEY 93 (786)
T ss_pred eeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEe
Confidence 555788999999999999999999999999997652 22345678899999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++|.|.++|.. ++.|+..+..+.++||+.|+.|+|. .+|+||||||+|+|||..+++||+|||+|.+--.+
T Consensus 94 v~gGELFdylv~-----kG~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g 165 (786)
T KOG0588|consen 94 VPGGELFDYLVR-----KGPLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG 165 (786)
T ss_pred cCCchhHHHHHh-----hCCCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence 999999999954 4679999999999999999999999 89999999999999999999999999999875433
Q ss_pred CCCcceecccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKA-TTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
......+|.++|.|||++.+..| ..++||||+|||||.|+||+.||+++.- ..|..-|+ ..
T Consensus 166 --klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi---r~LLlKV~-------------~G 227 (786)
T KOG0588|consen 166 --KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI---RVLLLKVQ-------------RG 227 (786)
T ss_pred --ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH---HHHHHHHH-------------cC
Confidence 33445699999999999998775 6799999999999999999999995432 11111111 11
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhcCCCCCCC
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF--LLRDASLPQA 638 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~--L~~~~~~p~~ 638 (662)
.-+.+.....+.+.|+.+|+..||++|-|++||+++ |.+-..+|..
T Consensus 228 ~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~~ 275 (786)
T KOG0588|consen 228 VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPSS 275 (786)
T ss_pred cccCCCcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCChh
Confidence 112334556678889999999999999999999996 4554444443
No 53
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.2e-38 Score=321.14 Aligned_cols=254 Identities=23% Similarity=0.409 Sum_probs=206.9
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..++||+|++|.||+|... ++..||+|.+.... ...+.+.+|+.++++++|+||+++++++...+..+++|||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 56888999999999999999974 56779999886543 33578899999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.... ...+++.+++.++.|+++||+|||+ .+++||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 84 AKGSLLDFLKSDE---GGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred CCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence 9999999996542 3568899999999999999999999 899999999999999999999999999998765433
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
........++..|+|||++..+.++.++|||||||++|||++ |+.||....... ...++.. +. ..+..
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~---~~~~~~~----~~----~~~~~ 226 (261)
T cd05072 158 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSD---VMSALQR----GY----RMPRM 226 (261)
T ss_pred eeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHH---HHHHHHc----CC----CCCCC
Confidence 222223345778999999988889999999999999999998 999987543221 1112111 10 00111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
......+.+++.+|++.+|++||+++++.+.|+.
T Consensus 227 ----~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 227 ----ENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred ----CCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1234568889999999999999999999999874
No 54
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=6.6e-38 Score=325.76 Aligned_cols=265 Identities=24% Similarity=0.343 Sum_probs=202.7
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
++|+..++||+|+||.||+|....++..||+|++.... ......+.+|+.++++++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56888999999999999999998899999999986543 22345678999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
++ ++|.+++... ...+++..+..++.||++||.|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 85 ~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 85 LD-SDLKQYLDNC----GNLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred CC-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 97 5898888543 3457889999999999999999999 89999999999999999999999999999865432
Q ss_pred CCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHH-----HHhhc----C
Q 040242 514 INPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVR-----ELHSQ----G 583 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~-----~~~~~----~ 583 (662)
.. ......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||................ ..+.. .
T Consensus 157 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 157 TK-TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNE 235 (288)
T ss_pred Cc-cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccch
Confidence 21 2233467899999998765 468999999999999999999999997654332221110000 00000 0
Q ss_pred ccccccCCCCC-----CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 584 QITRAIDPTLD-----YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 584 ~~~~~id~~l~-----~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.......+... ...........+++.+||+.||.+|||++|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00111111110 0011223557899999999999999999999864
No 55
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.5e-37 Score=332.71 Aligned_cols=248 Identities=25% Similarity=0.381 Sum_probs=196.4
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
+|+..++||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++|+||+++++++...+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 3455788999999999999998889999999986543 334567899999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.... .+++..+..++.||+.||.|||+ .+|+||||||+|||+++++.+||+|||+++......
T Consensus 155 ~~~~L~~~~---------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 155 DGGSLEGTH---------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred CCCcccccc---------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 999987543 24566778899999999999999 899999999999999999999999999998765432
Q ss_pred CCcceecccCCcccCcccccC-----CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcccccc
Q 040242 515 NPQTTHIVGTLGYLAPELTRT-----GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAI 589 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 589 (662)
. ......||..|+|||++.. ...+.++|||||||++|||++|+.||..........+...+. . ..
T Consensus 223 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~----~-----~~ 292 (353)
T PLN00034 223 D-PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC----M-----SQ 292 (353)
T ss_pred c-cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh----c-----cC
Confidence 2 1233578999999998743 234568999999999999999999997433221111111000 0 00
Q ss_pred CCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 590 DPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 590 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
. ..........+.+|+.+||+.||++||++.|++++
T Consensus 293 ~---~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 293 P---PEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred C---CCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 11122345568899999999999999999999986
No 56
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.7e-38 Score=333.96 Aligned_cols=246 Identities=24% Similarity=0.331 Sum_probs=202.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCC-cEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTG-LEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g-~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
++|+..+.||+|+||.||+|.+...+ ..||+|++.... ....+.+.+|+.+++.++||||+++++++...+..++|
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 56888999999999999999875544 689999986542 23456788999999999999999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
|||+++|+|.+++... ..+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 110 ~Ey~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 110 LEFVIGGEFFTFLRRN-----KRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFGFAKVV 181 (340)
T ss_pred EeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence 9999999999998543 458899999999999999999999 89999999999999999999999999999865
Q ss_pred cCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||....... .. .....+.
T Consensus 182 ~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~---~~----~~i~~~~------ 244 (340)
T PTZ00426 182 DTR----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLL---IY----QKILEGI------ 244 (340)
T ss_pred CCC----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHH---HH----HHHhcCC------
Confidence 432 234578999999999988889999999999999999999999998653321 11 1111111
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRP-----STRRVVQF 628 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~eVl~~ 628 (662)
..++......+.+++.+|++.||.+|+ ++++++++
T Consensus 245 ---~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 245 ---IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred ---CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 011222334577899999999999995 89988875
No 57
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=3.9e-38 Score=339.65 Aligned_cols=261 Identities=24% Similarity=0.394 Sum_probs=204.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCC-----CCcEEEEEEeeccc-hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPS-----TGLEVAIKRVAHNS-RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDEL 427 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~-----~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~ 427 (662)
++|+..+.||+|+||.||+|+... ++..||||++.... ......+.+|+.+++.+ +|+||++++++|...+..
T Consensus 38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 468889999999999999998633 33579999997543 33456788999999999 899999999999999999
Q ss_pred eEEEeccCCCCcchhcccccc-----------------------------------------------------------
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQ----------------------------------------------------------- 448 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~----------------------------------------------------------- 448 (662)
++||||+++|+|.+++.....
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 999999999999998854211
Q ss_pred ------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC-cceec
Q 040242 449 ------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP-QTTHI 521 (662)
Q Consensus 449 ------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~-~~~~~ 521 (662)
.....+++.+.++++.||++||.|||+ .+|+||||||+|||+++++.+||+|||+++........ .....
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~ 274 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence 011347889999999999999999999 89999999999999999999999999999865433211 11123
Q ss_pred ccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHH
Q 040242 522 VGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQE 600 (662)
Q Consensus 522 ~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~ 600 (662)
.++..|+|||++.+..++.++|||||||++|||++ |+.||........ .. .....+ ..+.. +...
T Consensus 275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~--~~----~~~~~~-----~~~~~---~~~~ 340 (374)
T cd05106 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSK--FY----KMVKRG-----YQMSR---PDFA 340 (374)
T ss_pred CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHH--HH----HHHHcc-----cCccC---CCCC
Confidence 35678999999988889999999999999999997 9999975432211 10 111111 01111 1112
Q ss_pred HHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 601 AELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 601 ~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
...+.+++.+||+.||.+||++.+|++.|++.
T Consensus 341 ~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~ 372 (374)
T cd05106 341 PPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372 (374)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 45688899999999999999999999999763
No 58
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.9e-38 Score=321.19 Aligned_cols=256 Identities=27% Similarity=0.443 Sum_probs=211.8
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
+..+|+..++||.|++|.||+|.... +..+++|.+.........++..|+.++++++|+||+++++++...+..++|||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 34568889999999999999999976 88999999987766567789999999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|+++++|.+++.... ...+++.+++.++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++.....
T Consensus 83 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~ 156 (261)
T cd05148 83 LMEKGSLLAFLRSPE---GQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKE 156 (261)
T ss_pred ecccCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCC
Confidence 999999999997543 3568999999999999999999999 8999999999999999999999999999987644
Q ss_pred CCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
.... .....++..|+|||.+....++.++||||||+++++|++ |+.||....... ....+.. + ..
T Consensus 157 ~~~~-~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~---~~~~~~~----~-----~~- 222 (261)
T cd05148 157 DVYL-SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHE---VYDQITA----G-----YR- 222 (261)
T ss_pred cccc-ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHH---HHHHHHh----C-----Cc-
Confidence 3221 123345778999999988889999999999999999998 899987543211 1111111 0 00
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
...+......+.+++.+||+.+|++|||+.++++.|+.
T Consensus 223 --~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 223 --MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred --CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 11122345668899999999999999999999999975
No 59
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.1e-37 Score=318.91 Aligned_cols=255 Identities=28% Similarity=0.415 Sum_probs=206.4
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
.++|+..+.||+|++|.||+|... .+..||+|.+.... ...+++.+|+.++++++|+||+++++++...+..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 356888999999999999999984 45789999986543 3356789999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++.... ...+++.++..++.|++.||.|||+ .+++||||||+||++++++.+||+|||+++.....
T Consensus 83 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~ 156 (261)
T cd05068 83 MKYGSLLEYLQGGA---GRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKED 156 (261)
T ss_pred ccCCcHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCC
Confidence 99999999996542 3468999999999999999999999 89999999999999999999999999999876533
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
..........+..|+|||++.+..++.++||||||+++|||++ |+.||....... +...+ .... .
T Consensus 157 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~----~~~~-----~-- 222 (261)
T cd05068 157 IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAE---VLQQV----DQGY-----R-- 222 (261)
T ss_pred cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHH----HcCC-----C--
Confidence 2222222233468999999988889999999999999999999 999987543211 11111 1110 0
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
..........+.+++.+|++.+|.+||++.++++.|+.
T Consensus 223 -~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 223 -MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred -CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 01122345678899999999999999999999999874
No 60
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.2e-37 Score=346.24 Aligned_cols=253 Identities=22% Similarity=0.330 Sum_probs=206.6
Q ss_pred CCcccceeeeeCceEEEEEEeCCC-CcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPST-GLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~-g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
.|...+.||+|++|.||+|....+ +..||+|.+..........+..|+.+++.++||||+++++++...+..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 378889999999999999998766 7789999876665555667889999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++|+|.++|.+... ....+++.+...++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++.+....
T Consensus 148 ~gg~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 148 SGGDLNKQIKQRLK-EHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 99999998864321 13468889999999999999999999 899999999999999999999999999998765432
Q ss_pred CC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 515 NP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 515 ~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
.. ......||++|+|||++.+..++.++|||||||++|||++|+.||....... .+.... .+. .++
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~------~~~~~~-~~~----~~~-- 290 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQRE------IMQQVL-YGK----YDP-- 290 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH------HHHHHH-hCC----CCC--
Confidence 21 2334569999999999998899999999999999999999999997543211 111111 111 111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
.+......+.+++.+||+.+|++||++.++++
T Consensus 291 --~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 291 --FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred --CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 11223456888999999999999999999875
No 61
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1e-37 Score=324.25 Aligned_cols=263 Identities=27% Similarity=0.378 Sum_probs=196.6
Q ss_pred cCCcccceeeeeCceEEEEEEeCC-CCcEEEEEEeeccc--hhhHHHHHHHHHHhhcc---ccccceeeeeeEec-----
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPS-TGLEVAIKRVAHNS--RQGMKEFVAEITSMGRL---RHRNLVQLHGWCRK----- 423 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~-~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l---~H~niv~l~~~~~~----- 423 (662)
++|+..+.||+|+||.||+|.... ++..||+|++.... ......+.+|+.+++++ +||||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 368889999999999999999854 46889999886542 22234556677666655 69999999999852
Q ss_pred cCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEee
Q 040242 424 QDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGD 503 (662)
Q Consensus 424 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 503 (662)
....++||||++ ++|.+++.... ...+++.++..++.|+++||.|||+ .+|+||||||+|||++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~D 153 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLAD 153 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEcc
Confidence 346899999995 68999886442 3458999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH-HHHHHHHHhhc
Q 040242 504 FGLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV-LVDWVRELHSQ 582 (662)
Q Consensus 504 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~~~~~~~ 582 (662)
||+++..... .......|++.|+|||.+.+..++.++|||||||++|||++|+.||.......... +.+... ....
T Consensus 154 fg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~-~~~~ 230 (290)
T cd07862 154 FGLARIYSFQ--MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIG-LPGE 230 (290)
T ss_pred ccceEeccCC--cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhC-CCCh
Confidence 9999876443 22334568999999999988889999999999999999999999998654322111 111100 0000
Q ss_pred Ccc-------ccccCCCC----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 583 GQI-------TRAIDPTL----DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 583 ~~~-------~~~id~~l----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
... .....+.. ....+.....+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 231 EDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000 00011000 0111223456789999999999999999999985
No 62
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.1e-37 Score=323.49 Aligned_cols=253 Identities=25% Similarity=0.392 Sum_probs=205.2
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
+|+..++||+|+||+||++....+++.||+|++.... ......+.+|+.++++++|+||+++++++..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4778899999999999999998889999999996542 2234567889999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|+++|+|.+++.... ...+++..+..++.|++.||.|||+ .+++||||||+||++++++.++|+|||+++....
T Consensus 81 ~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 154 (285)
T cd05605 81 LMNGGDLKFHIYNMG---NPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPE 154 (285)
T ss_pred ccCCCcHHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecCC
Confidence 999999998885432 3468999999999999999999999 8999999999999999999999999999987543
Q ss_pred CCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
.. ......|+..|+|||.+.+..++.++||||+||++|||++|+.||......... +.+... +...
T Consensus 155 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~---~~~~~~---------~~~~ 220 (285)
T cd05605 155 GE--TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR---EEVERR---------VKED 220 (285)
T ss_pred CC--ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH---HHHHHH---------hhhc
Confidence 22 122346899999999998888999999999999999999999999754322111 011111 1111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRP-----STRRVVQF 628 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~eVl~~ 628 (662)
...+.......+.+|+.+||+.||.+|| ++.+++++
T Consensus 221 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 221 QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 1122334556688999999999999999 88888764
No 63
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.9e-37 Score=318.05 Aligned_cols=256 Identities=30% Similarity=0.463 Sum_probs=207.4
Q ss_pred cCCcccceeeeeCceEEEEEEeCCC---CcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPST---GLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~---g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
++|+..+.||+|+||.||+|.+... ...||||.+.... .....+|.+|+..+++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 5688899999999999999998543 4579999986543 34456789999999999999999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
|||+++++|.+++... ...+++.+++.++.|++.||.|||+ .+|+||||||+||++++++.++|+|||+++..
T Consensus 84 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~ 156 (266)
T cd05033 84 TEYMENGSLDKFLREN----DGKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRRL 156 (266)
T ss_pred EEcCCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECccchhhcc
Confidence 9999999999999654 2468999999999999999999999 89999999999999999999999999999977
Q ss_pred cCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccc
Q 040242 511 DHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRA 588 (662)
Q Consensus 511 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 588 (662)
...... ......++..|+|||.+.+..++.++||||||+++|||++ |..||...... .+.+.+. .+.
T Consensus 157 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~~----~~~---- 225 (266)
T cd05033 157 EDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ---DVIKAVE----DGY---- 225 (266)
T ss_pred cccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH---HHHHHHH----cCC----
Confidence 522211 1112345678999999988889999999999999999998 99998644321 1112211 110
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 589 IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 589 id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
..+ ........+.+++.+|++.+|++||++.+|+++|++.
T Consensus 226 ~~~----~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 226 RLP----PPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCC----CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 001 1123456688999999999999999999999999753
No 64
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.2e-37 Score=328.11 Aligned_cols=257 Identities=25% Similarity=0.385 Sum_probs=204.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCc----EEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGL----EVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~----~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
.+|+..+.||+|+||.||+|++..++. .||+|.+.... ....+++.+|+.+++.++||||++++++|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 468889999999999999999765554 48999986543 34567889999999999999999999999764 5789
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
++||+++|+|.+++... ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 86 v~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 86 ITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred eeecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEcccccccc
Confidence 99999999999999654 3458899999999999999999999 8999999999999999999999999999997
Q ss_pred ccCCCCCcc-eecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCcccc
Q 040242 510 YDHNINPQT-THIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITR 587 (662)
Q Consensus 510 ~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 587 (662)
......... ....++..|+|||++.+..++.++|||||||++|||++ |+.||....... +.. ....+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~---~~~----~~~~~~--- 228 (316)
T cd05108 159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---ISS----ILEKGE--- 228 (316)
T ss_pred ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHH---HHH----HHhCCC---
Confidence 654322211 12234678999999998899999999999999999998 999987543211 111 111111
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 040242 588 AIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDAS 634 (662)
Q Consensus 588 ~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~ 634 (662)
.+ ..+......+.+++.+||+.+|.+||++.+++..|.....
T Consensus 229 ----~~-~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~ 270 (316)
T cd05108 229 ----RL-PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270 (316)
T ss_pred ----CC-CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHc
Confidence 00 0111233567889999999999999999999999876543
No 65
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.3e-37 Score=333.89 Aligned_cols=259 Identities=21% Similarity=0.190 Sum_probs=199.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..+.||+|+||.||++.+..+++.||+|.... ..+.+|+.++++++||||+++++++..+...++|+|++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 579999999999999999999999999999997532 34678999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
.++|..++.. ...+++.+++.++.|+++||.|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 166 -~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 166 -KTDLYCYLAA-----KRNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred -CCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 4788888743 2458899999999999999999999 899999999999999999999999999997543322
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchh-----hHHHHHHHHH-----------
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAM-----ELVLVDWVRE----------- 578 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~-----~~~l~~~~~~----------- 578 (662)
........||+.|+|||++.+..++.++|||||||++|||++|+.|+....... ...+...+..
T Consensus 237 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~ 316 (391)
T PHA03212 237 ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPID 316 (391)
T ss_pred ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcc
Confidence 223334579999999999988889999999999999999999998875322110 0001000000
Q ss_pred -------HhhcCccccccCCCCCC---CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 579 -------LHSQGQITRAIDPTLDY---FDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 579 -------~~~~~~~~~~id~~l~~---~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.+..........+.... ........+..|+.+||+.||.+|||++|++++
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 317 AQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred hhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00000000000000000 001234568899999999999999999999974
No 66
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=9.7e-38 Score=336.15 Aligned_cols=256 Identities=23% Similarity=0.266 Sum_probs=204.5
Q ss_pred HhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeee
Q 040242 352 SATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELL 428 (662)
Q Consensus 352 ~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 428 (662)
...++|+..+.||+|+||.||+++...++..||+|++.... ....+.+..|+.+++.++||||+++++++...+..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34568999999999999999999999899999999996532 233455788999999999999999999999999999
Q ss_pred EEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccc
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLAR 508 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~ 508 (662)
+||||+++|+|.+++.. ..++......++.|+++||.|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 120 lv~Ey~~gg~L~~~l~~------~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~DfG~~~ 190 (370)
T cd05596 120 MVMEYMPGGDLVNLMSN------YDIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCM 190 (370)
T ss_pred EEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEecccee
Confidence 99999999999999843 247778888899999999999999 899999999999999999999999999998
Q ss_pred cccCCCCCcceecccCCcccCcccccCC----CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCc
Q 040242 509 AYDHNINPQTTHIVGTLGYLAPELTRTG----KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQ 584 (662)
Q Consensus 509 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 584 (662)
..............||+.|+|||.+.+. .++.++|||||||++|||++|+.||........ .........
T Consensus 191 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~------~~~i~~~~~ 264 (370)
T cd05596 191 KMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT------YSKIMDHKN 264 (370)
T ss_pred eccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHH------HHHHHcCCC
Confidence 7654332223345799999999988643 478899999999999999999999986543211 111111000
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 040242 585 ITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDF--RPSTRRVVQF 628 (662)
Q Consensus 585 ~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~eVl~~ 628 (662)
. .... ........+.+++.+||+.+|.+ ||++.+++++
T Consensus 265 --~---~~~~-~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 265 --S---LTFP-DDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred --c---CCCC-CcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 0 0010 01123466788899999999988 9999999875
No 67
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.1e-38 Score=330.52 Aligned_cols=241 Identities=25% Similarity=0.301 Sum_probs=196.9
Q ss_pred eeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCc
Q 040242 363 VGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL 439 (662)
Q Consensus 363 LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 439 (662)
||+|+||.||++....+++.||+|++... .......+..|+.++.+++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 79999999999999888999999998653 234456788999999999999999999999999999999999999999
Q ss_pred chhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcce
Q 040242 440 DKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQTT 519 (662)
Q Consensus 440 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~~ 519 (662)
.+++... ..+++..+..++.|+++||.|||+ .+|+||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 ~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~ 151 (312)
T cd05585 81 FHHLQRE-----GRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTN 151 (312)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Cccc
Confidence 9998542 458899999999999999999999 899999999999999999999999999998543221 2233
Q ss_pred ecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHH
Q 040242 520 HIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQ 599 (662)
Q Consensus 520 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 599 (662)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||...... ........ +. . .++..
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~------~~~~~~~~-~~------~---~~~~~ 215 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVN------EMYRKILQ-EP------L---RFPDG 215 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHH------HHHHHHHc-CC------C---CCCCc
Confidence 457899999999999888999999999999999999999999754321 11111111 00 1 11223
Q ss_pred HHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 040242 600 EAELVLTLGLLCCDPHPDFRPS---TRRVVQF 628 (662)
Q Consensus 600 ~~~~l~~l~~~Cl~~dP~~RPt---~~eVl~~ 628 (662)
....+.+++.+||+.||.+||+ +.|++++
T Consensus 216 ~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 216 FDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 3456788899999999999975 5666653
No 68
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.7e-37 Score=315.64 Aligned_cols=248 Identities=25% Similarity=0.398 Sum_probs=199.9
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCc
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL 439 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 439 (662)
+.||+|+||.||+|.+..+++.||+|.+... .......+.+|++++++++||||++++++|...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 4699999999999999888999999988654 344456799999999999999999999999999999999999999999
Q ss_pred chhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcc-
Q 040242 440 DKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQT- 518 (662)
Q Consensus 440 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~- 518 (662)
.+++... ...+++.+++.++.|+++||.|||+ .+++||||||+||+++.++.+||+|||++...........
T Consensus 81 ~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 153 (252)
T cd05084 81 LTFLRTE----GPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTG 153 (252)
T ss_pred HHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccccccC
Confidence 9998543 3458899999999999999999999 8999999999999999999999999999886543211111
Q ss_pred eecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCC
Q 040242 519 THIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFD 597 (662)
Q Consensus 519 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 597 (662)
.....+..|+|||.+.++.++.++|||||||++|||++ |..|+........ ....... .. ...+
T Consensus 154 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~-------~~~~~~~-----~~---~~~~ 218 (252)
T cd05084 154 GMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQT-------REAIEQG-----VR---LPCP 218 (252)
T ss_pred CCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHH-------HHHHHcC-----CC---CCCc
Confidence 11123467999999988889999999999999999998 8888864332111 1111110 00 1112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 598 PQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 598 ~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
......+.+++.+|++.+|++||++.+|++.|.
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 219 ELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 233567889999999999999999999999986
No 69
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.9e-37 Score=314.22 Aligned_cols=251 Identities=27% Similarity=0.425 Sum_probs=208.1
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+|+..+.||+|++|.||++....++..|++|.+... .......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 467788999999999999999889999999998653 344567889999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++.... ...+++.+++.++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||+++.....
T Consensus 81 ~~~~~L~~~l~~~~---~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~ 154 (256)
T cd08529 81 AENGDLHKLLKMQR---GRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN 154 (256)
T ss_pred CCCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence 99999999996542 3568999999999999999999998 89999999999999999999999999999876543
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
... .....|++.|+|||+..+..++.++|||||||+++||++|+.||...... .....+ ..+ ..
T Consensus 155 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~----~~~--------~~ 218 (256)
T cd08529 155 TNF-ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQG---ALILKI----IRG--------VF 218 (256)
T ss_pred cch-hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH---HHHHHH----HcC--------CC
Confidence 222 22346789999999999888999999999999999999999999755421 111111 111 11
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
..........+.+++.+||+.+|++||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 219 PPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 11122345678899999999999999999999875
No 70
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.8e-37 Score=329.67 Aligned_cols=261 Identities=25% Similarity=0.375 Sum_probs=198.7
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccC-----eee
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD-----ELL 428 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~-----~~~ 428 (662)
+|+..++||+|+||.||+|+...++..||||++... ......++.+|+.++++++||||+++++++.... ..+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 477889999999999999999889999999998643 2233457889999999999999999999885432 479
Q ss_pred EEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccc
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLAR 508 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~ 508 (662)
+||||+. ++|.+++.. ...+++..+..++.|+++||.|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 81 lv~e~~~-~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~ 151 (338)
T cd07859 81 VVFELME-SDLHQVIKA-----NDDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred EEEecCC-CCHHHHHHh-----cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCcccc
Confidence 9999995 688888843 2458999999999999999999999 899999999999999999999999999998
Q ss_pred cccCCCC--CcceecccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHh----
Q 040242 509 AYDHNIN--PQTTHIVGTLGYLAPELTRT--GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELH---- 580 (662)
Q Consensus 509 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~--~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~---- 580 (662)
....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... .+....
T Consensus 152 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~---~~~~~~~~~~ 228 (338)
T cd07859 152 VAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLD---LITDLLGTPS 228 (338)
T ss_pred ccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHH---HHHHHhCCCC
Confidence 6533211 12234578999999998865 578999999999999999999999997543221111 110000
Q ss_pred -------hcCc---cccccCCC----CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 581 -------SQGQ---ITRAIDPT----LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 581 -------~~~~---~~~~id~~----l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.... ....+.+. +....+.....+.+++.+||+.||++||+++|++++
T Consensus 229 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 229 PETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000 00000000 000011223557899999999999999999999974
No 71
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=9.8e-38 Score=333.54 Aligned_cols=253 Identities=25% Similarity=0.365 Sum_probs=206.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|...+.||+|+||+||+|....+++.||||++.... ......+..|+.++..++|+||+++++++..++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46888999999999999999998889999999997642 234567889999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++++|.+++... ..+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 152 (350)
T cd05573 81 EYMPGGDLMNLLIRK-----DVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMN 152 (350)
T ss_pred cCCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCc
Confidence 999999999998543 468899999999999999999999 899999999999999999999999999998665
Q ss_pred CCC----------------------------CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 040242 512 HNI----------------------------NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEP 563 (662)
Q Consensus 512 ~~~----------------------------~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~ 563 (662)
... ........||+.|+|||.+.+..++.++|||||||++|||++|+.||..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 232 (350)
T cd05573 153 KAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYS 232 (350)
T ss_pred ccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCC
Confidence 432 1122335689999999999998999999999999999999999999986
Q ss_pred ccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHHH
Q 040242 564 QRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPS-TRRVVQF 628 (662)
Q Consensus 564 ~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~eVl~~ 628 (662)
....... ...... .+.+ .+.. .......+..++.+|++ +|.+||+ +.+++++
T Consensus 233 ~~~~~~~------~~i~~~---~~~~--~~p~-~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 233 DTLQETY------NKIINW---KESL--RFPP-DPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCHHHHH------HHHhcc---CCcc--cCCC-CCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 5422111 111000 0000 0100 11135667788889997 9999999 9999985
No 72
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=4.6e-38 Score=333.48 Aligned_cols=254 Identities=28% Similarity=0.328 Sum_probs=205.0
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|+||+||++....+++.||+|++.... .+..+.+.+|+.+++.++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46888999999999999999999899999999997643 234566889999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++|+|.+++... ...+++.....++.|+++||.|||+ .+|+||||||+|||++.++.+||+|||++....
T Consensus 81 e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~ 153 (330)
T cd05601 81 EYQPGGDLLSLLNRY----EDQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLT 153 (330)
T ss_pred CCCCCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECC
Confidence 999999999999543 2468999999999999999999999 899999999999999999999999999998765
Q ss_pred CCCCCcceecccCCcccCccccc------CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcc
Q 040242 512 HNINPQTTHIVGTLGYLAPELTR------TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQI 585 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~------~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 585 (662)
...........||+.|+|||++. ...++.++|||||||++|||++|+.||........ ..........
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~------~~~i~~~~~~ 227 (330)
T cd05601 154 ANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKT------YNNIMNFQRF 227 (330)
T ss_pred CCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHH------HHHHHcCCCc
Confidence 44333333457899999999886 45678899999999999999999999975433211 1111111110
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 586 TRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 586 ~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
... + ........+..|+..|++ +|.+||++.+++++
T Consensus 228 ~~~--~----~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 228 LKF--P----EDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred cCC--C----CCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 000 0 011234557788889998 99999999999864
No 73
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2.2e-37 Score=319.70 Aligned_cols=259 Identities=27% Similarity=0.434 Sum_probs=208.9
Q ss_pred cCCcccceeeeeCceEEEEEEeCC-----CCcEEEEEEeeccchh-hHHHHHHHHHHhhccccccceeeeeeEeccCeee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPS-----TGLEVAIKRVAHNSRQ-GMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELL 428 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~-----~g~~vavK~~~~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 428 (662)
++|...+.||+|+||.||+|.... ++..||||.+...... ..+.+.+|++++++++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457788999999999999998743 3578999998765443 5678999999999999999999999999999999
Q ss_pred EEEeccCCCCcchhccccc---------ccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCe
Q 040242 429 LVYDYVPNGSLDKLLFDND---------QQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNP 499 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~---------~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 499 (662)
+||||+++++|.+++.... ......+++.++..++.|++.||.|||+ .+++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeE
Confidence 9999999999999996542 1123568999999999999999999999 899999999999999999999
Q ss_pred EEeeccccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHH
Q 040242 500 KLGDFGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVR 577 (662)
Q Consensus 500 kL~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~ 577 (662)
||+|||+++....... .......+++.|+|||++.++.++.++|||||||++|||++ |+.||....... ..+.+.
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~---~~~~~~ 238 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEE---VIECIT 238 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHH---HHHHHH
Confidence 9999999976433211 11223345788999999999999999999999999999998 999987543321 111111
Q ss_pred HHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 578 ELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 578 ~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
.+. ....+......+.+++++||+.||++||++.||++.|++
T Consensus 239 ----~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 239 ----QGR--------LLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred ----cCC--------cCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 111 111122345678899999999999999999999999863
No 74
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=325.12 Aligned_cols=250 Identities=28% Similarity=0.459 Sum_probs=210.9
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
..|+..+.||+|.||.||||.+..+++.||+|++..+ .+...++..+|+.+|.+++++||.++++.+..+..++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 4566778999999999999999999999999999765 345567888999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
|.+|++.+.|... ..+++....-+++++..||.|||. .+.+|||||+.|||+..+|.+||+|||++......
T Consensus 93 ~~gGsv~~lL~~~-----~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~ 164 (467)
T KOG0201|consen 93 CGGGSVLDLLKSG-----NILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNT 164 (467)
T ss_pred hcCcchhhhhccC-----CCCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeech
Confidence 9999999999543 334677777789999999999999 89999999999999999999999999999877655
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
.... ...+||+.|||||+++...|+.|+||||||++.+||++|.+|+..-.+.-... -+.+...|.+
T Consensus 165 ~~rr-~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf------------lIpk~~PP~L 231 (467)
T KOG0201|consen 165 VKRR-KTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF------------LIPKSAPPRL 231 (467)
T ss_pred hhcc-ccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE------------eccCCCCCcc
Confidence 4333 55789999999999998899999999999999999999999987554311100 0112223333
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+......+.+++..||+.||+.||++.+++++
T Consensus 232 ---~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 232 ---DGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ---ccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 22566778899999999999999999999973
No 75
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.9e-37 Score=318.77 Aligned_cols=261 Identities=23% Similarity=0.400 Sum_probs=205.9
Q ss_pred hccCCcccceeeeeCceEEEEEEeCC-----CCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCe
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPS-----TGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDE 426 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~-----~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~ 426 (662)
++++|+..+.||+|++|.||+|.... .+..||+|++.... .....+|.+|+.++++++|+||+++++++.....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 45779999999999999999998642 34679999986432 3345678999999999999999999999999999
Q ss_pred eeEEEeccCCCCcchhccccccc-----ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEE
Q 040242 427 LLLVYDYVPNGSLDKLLFDNDQQ-----KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKL 501 (662)
Q Consensus 427 ~~lV~E~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL 501 (662)
.++||||+++++|.+++...... ....+++..++.++.|+++||.|||+ .+++||||||+||++++++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEEE
Confidence 99999999999999998643211 12346888999999999999999999 89999999999999999999999
Q ss_pred eeccccccccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHH
Q 040242 502 GDFGLARAYDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVREL 579 (662)
Q Consensus 502 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~ 579 (662)
+|||+++........ ......++..|+|||.+.++.++.++|||||||++|||++ |..||....... ..+.+
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~---~~~~~--- 234 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQ---VLRFV--- 234 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHH---
Confidence 999998765432211 1112345778999999988889999999999999999999 688886543221 11111
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 580 HSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 580 ~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
..+. ....+......+.+++.+|++.+|++||++.|+++.|++
T Consensus 235 -~~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 235 -MEGG--------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred -HcCC--------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 1111 111122344578899999999999999999999999863
No 76
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2.9e-37 Score=321.35 Aligned_cols=263 Identities=27% Similarity=0.429 Sum_probs=211.1
Q ss_pred cCCcccceeeeeCceEEEEEEeC-----CCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIP-----STGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~-----~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
++|...+.||+|+||.||+++.. .++..+++|.+........+.+.+|+..+++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 35777889999999999999853 2445699999877766666789999999999999999999999999999999
Q ss_pred EEeccCCCCcchhcccccc-----------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCC
Q 040242 430 VYDYVPNGSLDKLLFDNDQ-----------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLN 498 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 498 (662)
||||+++++|.+++..... .....++|..++.++.|++.||+|||+ .+++||||||+||+++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCc
Confidence 9999999999999965321 112458999999999999999999999 89999999999999999999
Q ss_pred eEEeeccccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHH
Q 040242 499 PKLGDFGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWV 576 (662)
Q Consensus 499 ~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~ 576 (662)
+||+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |+.||....... ..+.
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~- 237 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE---VIEC- 237 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHH-
Confidence 99999999976543221 11223456788999999988889999999999999999998 999986543321 1111
Q ss_pred HHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCC
Q 040242 577 RELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDASL 635 (662)
Q Consensus 577 ~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~~ 635 (662)
...+... ......+..+.+++.+||+.+|.+||++++|+++|+.....
T Consensus 238 ---~~~~~~~--------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 238 ---ITQGRVL--------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred ---HhCCCCC--------CCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 1111111 11122456688999999999999999999999999887443
No 77
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=3.9e-37 Score=322.30 Aligned_cols=263 Identities=23% Similarity=0.350 Sum_probs=200.4
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch-hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR-QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~-~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
.++|+..+.||+|+||.||+|....+++.||||++..... .....+.+|+.++++++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 4679999999999999999999988899999999865432 223467889999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|++ ++|.+++... ...+++..+..++.|+++||.|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 84 ~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 155 (303)
T cd07869 84 YVH-TDLCQYMDKH----PGGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLARAKSV 155 (303)
T ss_pred CCC-cCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcceeccC
Confidence 995 6787777543 3458888999999999999999999 8999999999999999999999999999875433
Q ss_pred CCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcC---c----
Q 040242 513 NINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQG---Q---- 584 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~---~---- 584 (662)
.. .......+++.|+|||.+.+ ..++.++||||+||++|||++|+.||........ . .+.+....... .
T Consensus 156 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd07869 156 PS-HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQD-Q-LERIFLVLGTPNEDTWPGV 232 (303)
T ss_pred CC-ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHH-H-HHHHHHHhCCCChhhccch
Confidence 21 12233468899999998765 4578899999999999999999999986433211 1 11111110000 0
Q ss_pred -cccccCCC-CCCCCH----------HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 585 -ITRAIDPT-LDYFDP----------QEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 585 -~~~~id~~-l~~~~~----------~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
.....++. .....+ .....+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000000 000000 11245778999999999999999999986
No 78
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.8e-37 Score=345.47 Aligned_cols=261 Identities=24% Similarity=0.369 Sum_probs=209.6
Q ss_pred HHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccC-
Q 040242 349 ELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD- 425 (662)
Q Consensus 349 el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~- 425 (662)
+.....++|...+.||+|+||+||++....+++.||||++... .......+.+|+..+..++|+|+++++..+...+
T Consensus 26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 3344557899999999999999999999889999999998654 3445567889999999999999999988765432
Q ss_pred -------eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCC
Q 040242 426 -------ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLN 498 (662)
Q Consensus 426 -------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 498 (662)
.+++||||+++|+|.+++..... ....+++.....++.|++.||.|||+ .+|+||||||+|||++.++.
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~-~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl~~~~~ 181 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRAK-TNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILLCSNGL 181 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEeCCCC
Confidence 36899999999999999865321 13568899999999999999999999 89999999999999999999
Q ss_pred eEEeeccccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHH
Q 040242 499 PKLGDFGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVR 577 (662)
Q Consensus 499 ~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~ 577 (662)
+||+|||+++.+..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +.+.
T Consensus 182 vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~------~~~~ 255 (496)
T PTZ00283 182 VKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME------EVMH 255 (496)
T ss_pred EEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH------HHHH
Confidence 99999999987654322 1223457999999999999889999999999999999999999999754321 1111
Q ss_pred HHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 578 ELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 578 ~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.... +. .+ ..+......+..++.+||+.||.+||++.+++++
T Consensus 256 ~~~~-~~----~~----~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 256 KTLA-GR----YD----PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHhc-CC----CC----CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1111 11 11 1223345668899999999999999999999874
No 79
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.2e-37 Score=327.48 Aligned_cols=246 Identities=25% Similarity=0.358 Sum_probs=196.8
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHH---hhccccccceeeeeeEeccCeeeEE
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITS---MGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~---l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
|+..+.||+|+||.||++....+++.||||++.... ....+.+..|+.+ +++++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 566889999999999999998899999999997542 2233456666554 4677899999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
|||+++++|..++. ...+++.+...++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++..
T Consensus 81 ~E~~~~~~L~~~~~------~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~ 151 (324)
T cd05589 81 MEYAAGGDLMMHIH------TDVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEG 151 (324)
T ss_pred EcCCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCccC
Confidence 99999999998874 2458999999999999999999999 89999999999999999999999999998753
Q ss_pred cCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
... ........|++.|+|||.+.+..++.++|||||||++|||++|+.||........ ...... +.
T Consensus 152 ~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~------~~~i~~-~~------ 217 (324)
T cd05589 152 MGF-GDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEV------FDSIVN-DE------ 217 (324)
T ss_pred CCC-CCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHH------HHHHHh-CC------
Confidence 222 1223345789999999999988899999999999999999999999976533211 111111 10
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRP-----STRRVVQF 628 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~eVl~~ 628 (662)
.. ++......+.+++.+||+.||.+|| ++.+++++
T Consensus 218 ~~---~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 218 VR---YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred CC---CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 11 1222345678899999999999999 57777664
No 80
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=5.8e-37 Score=325.52 Aligned_cols=260 Identities=23% Similarity=0.338 Sum_probs=204.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
++|+..+.||+|+||.||++.+..++..+|+|.+... .......+.+|++++++++|+||++++++|..++..++||||
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEec
Confidence 6788999999999999999999888999999988765 334456789999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++.. ...+++.....++.|++.||.|||+. .+++||||||+|||++.++.+||+|||++......
T Consensus 85 ~~~~~L~~~l~~-----~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 85 MDGGSLDQVLKK-----AGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred CCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 999999999854 24578889999999999999999972 47999999999999999999999999999765332
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcccc------
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITR------ 587 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~------ 587 (662)
......|+..|+|||.+.+..++.++|||||||++|||++|+.||.......... .+ .....+....
T Consensus 158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~ 230 (333)
T cd06650 158 ---MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELEL---MF-GCPVEGDPAESETSPR 230 (333)
T ss_pred ---ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHH---Hh-cCcccCCccccccCcc
Confidence 1223468999999999988889999999999999999999999997543211110 00 0000000000
Q ss_pred -----------------------ccC----CCCCCC-CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 588 -----------------------AID----PTLDYF-DPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 588 -----------------------~id----~~l~~~-~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
..+ ...... .......+.+|+.+||+.||++||++.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 231 PRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred cCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 000 000000 01133567899999999999999999999874
No 81
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.7e-37 Score=306.29 Aligned_cols=273 Identities=26% Similarity=0.341 Sum_probs=212.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh-h-HHHHHHHHHHhhccccccceeeeeeEec--cCeeeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ-G-MKEFVAEITSMGRLRHRNLVQLHGWCRK--QDELLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~-~-~~~f~~Ei~~l~~l~H~niv~l~~~~~~--~~~~~lV 430 (662)
+.|+..+.|++|.||.||+|+++.+++.||+|+++.+.+. + --.-++||.+|.+++|||||.+.....- .+..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 4578889999999999999999999999999999765422 1 1234799999999999999999887653 4579999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
||||+. +|..+|... ...+...+..-+..|+++|++|||. ..|+|||||++|+|++..|.+||+||||||.+
T Consensus 156 Me~~Eh-DLksl~d~m----~q~F~~~evK~L~~QlL~glk~lH~---~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~y 227 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETM----KQPFLPGEVKTLMLQLLRGLKHLHD---NWILHRDLKTSNLLLSHKGILKIADFGLAREY 227 (419)
T ss_pred HHHHHh-hHHHHHHhc----cCCCchHHHHHHHHHHHHHHHHHhh---ceeEecccchhheeeccCCcEEecccchhhhh
Confidence 999965 888888765 3567888888999999999999999 89999999999999999999999999999999
Q ss_pred cCCCCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcccccc
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAI 589 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 589 (662)
+.... ..+..+-|..|.|||.+.+. .++...|+||+|||+.||+++++.|.+..+.++...+-.+. |.-.+.+
T Consensus 228 gsp~k-~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~ll-----GtPte~i 301 (419)
T KOG0663|consen 228 GSPLK-PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLL-----GTPSEAI 301 (419)
T ss_pred cCCcc-cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHh-----CCCcccc
Confidence 87644 34556779999999988764 58999999999999999999999998776655544221111 1111111
Q ss_pred CCCC--------------------CCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHHH-hcCCCCCCCCCC
Q 040242 590 DPTL--------------------DYFDPQ-EAELVLTLGLLCCDPHPDFRPSTRRVVQFL-LRDASLPQAPLD 641 (662)
Q Consensus 590 d~~l--------------------~~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L-~~~~~~p~~p~~ 641 (662)
-|.+ ..+... ..+.-.+|....+..||.+|-|++|.+++= =.+.|.|..|-.
T Consensus 302 wpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~ 375 (419)
T KOG0663|consen 302 WPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPSM 375 (419)
T ss_pred CCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChhh
Confidence 1111 011111 235567888899999999999999999852 344455444433
No 82
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-38 Score=332.49 Aligned_cols=252 Identities=25% Similarity=0.380 Sum_probs=215.1
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCC
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
....++||-|.||.||.|+++.-...||||.++.+. ...++|+.|..+|+.++|||+|+|+|.|..+...|||+|||..
T Consensus 269 ItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt-MeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM~y 347 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFMCY 347 (1157)
T ss_pred eeeeeccCCCcccceeeeeeeccceeeehhhhhhcc-hhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecccC
Confidence 445789999999999999999888899999997654 4568999999999999999999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|+|.++|.+.. +..++--..+.++.||+.||.||.. +++|||||..+|+|+.++-.+|++||||++++..+...
T Consensus 348 GNLLdYLRecn---r~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT 421 (1157)
T KOG4278|consen 348 GNLLDYLRECN---RSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT 421 (1157)
T ss_pred ccHHHHHHHhc---hhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhcCCcee
Confidence 99999998765 5567777789999999999999999 89999999999999999999999999999998765444
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDY 595 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 595 (662)
.......+..|.|||.+....++.|+|||+|||+|||+.| |..||.+-+... +-.+++++- + .+
T Consensus 422 AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSq-------VY~LLEkgy-------R-M~ 486 (1157)
T KOG4278|consen 422 AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ-------VYGLLEKGY-------R-MD 486 (1157)
T ss_pred cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHH-------HHHHHhccc-------c-cc
Confidence 3334455789999999999999999999999999999998 888988654321 122222211 1 23
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 596 FDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 596 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
-+..++..+.+|++.||+++|.+||++.|+-+.++
T Consensus 487 ~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafE 521 (1157)
T KOG4278|consen 487 GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFE 521 (1157)
T ss_pred CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence 45678889999999999999999999999887665
No 83
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.9e-37 Score=331.85 Aligned_cols=253 Identities=22% Similarity=0.317 Sum_probs=201.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|+||+||+++...+++.||||++.... ......+.+|+.++.+++||||+++++++..++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46888999999999999999998899999999997542 334456788999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++|+|.+++... ..+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++..+.
T Consensus 81 E~~~~g~L~~~l~~~-----~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 152 (364)
T cd05599 81 EYLPGGDMMTLLMKK-----DTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK 152 (364)
T ss_pred CCCCCcHHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence 999999999998543 458999999999999999999999 899999999999999999999999999987543
Q ss_pred CCCCC-------------------------------------cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHH
Q 040242 512 HNINP-------------------------------------QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEV 554 (662)
Q Consensus 512 ~~~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el 554 (662)
..... ......||+.|+|||++....++.++|||||||++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 232 (364)
T cd05599 153 KSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEM 232 (364)
T ss_pred ccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHh
Confidence 21100 01124689999999999888899999999999999999
Q ss_pred HcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 040242 555 ACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPS---TRRVVQF 628 (662)
Q Consensus 555 ltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt---~~eVl~~ 628 (662)
++|+.||........ ...+ ..... ....+. .......+.+++.+|+. +|.+|++ +.|++++
T Consensus 233 ~~G~~Pf~~~~~~~~---~~~i---~~~~~--~~~~~~----~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 233 LVGYPPFCSDNPQET---YRKI---INWKE--TLQFPD----EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred hcCCCCCCCCCHHHH---HHHH---HcCCC--ccCCCC----CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 999999976543211 1111 00000 000011 01123456677788886 9999998 9998874
No 84
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=6.1e-37 Score=313.29 Aligned_cols=252 Identities=25% Similarity=0.392 Sum_probs=205.6
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-----hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-----RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-----~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
++|+..+.||+|++|.||++....++..|++|.+.... ....+.+.+|+.++++++||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57888999999999999999998889999999986532 2234578899999999999999999999999999999
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
|+||+++++|.+++.. ...+++.....++.|++.||.|||+ .+++||||+|+||++++++.++|+|||+++.
T Consensus 82 v~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~ 153 (263)
T cd06625 82 FMEYMPGGSVKDQLKA-----YGALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGASKR 153 (263)
T ss_pred EEEECCCCcHHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeccccee
Confidence 9999999999998853 2457888999999999999999999 8999999999999999999999999999986
Q ss_pred ccCCCCCcc--eecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcccc
Q 040242 510 YDHNINPQT--THIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITR 587 (662)
Q Consensus 510 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 587 (662)
......... ....++..|+|||.+.+..++.++||||||+++|||++|+.||......... .... . .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~---~-----~ 222 (263)
T cd06625 154 LQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAI---FKIA---T-----Q 222 (263)
T ss_pred ccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHH---HHHh---c-----c
Confidence 543221111 2345788999999999888999999999999999999999998754322111 0100 0 0
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 588 AIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 588 ~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+.....+......+.+++.+||..+|.+||++.+++++
T Consensus 223 ---~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 223 ---PTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred ---CCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 01112233345668889999999999999999999875
No 85
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.9e-37 Score=323.66 Aligned_cols=242 Identities=23% Similarity=0.338 Sum_probs=193.5
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhc-cccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGR-LRHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~-l~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
++||+|+||.||+|....+++.||+|++.... ....+.+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999998889999999997642 2334455667777665 4899999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|+|..++... ..+++.+...++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 g~L~~~~~~~-----~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~ 151 (316)
T cd05592 81 GDLMFHIQSS-----GRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-G 151 (316)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-C
Confidence 9999988543 358889999999999999999999 899999999999999999999999999998643322 2
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYF 596 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 596 (662)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... + ....... .+ .+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~---~---~~~i~~~-------~~---~~ 215 (316)
T cd05592 152 KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDE---L---FDSILND-------RP---HF 215 (316)
T ss_pred ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHH---H---HHHHHcC-------CC---CC
Confidence 2334578999999999998889999999999999999999999997653211 1 1111100 11 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHH-HHHH
Q 040242 597 DPQEAELVLTLGLLCCDPHPDFRPSTR-RVVQ 627 (662)
Q Consensus 597 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~-eVl~ 627 (662)
+......+.+++.+||+.+|.+||++. ++++
T Consensus 216 ~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 216 PRWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 222345677889999999999999875 5544
No 86
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.3e-37 Score=332.51 Aligned_cols=264 Identities=24% Similarity=0.337 Sum_probs=202.8
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccC-----eee
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD-----ELL 428 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~-----~~~ 428 (662)
+|+..+.||+|+||.||++....+++.||||++... .....+++.+|+.+++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999999889999999998653 2334567889999999999999999999998776 789
Q ss_pred EEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccc
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLAR 508 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~ 508 (662)
+|+||+. ++|.+++.. ...+++..+..++.||+.||.|||+ .+++||||||+|||++.++.+||+|||+++
T Consensus 81 lv~e~~~-~~l~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~ 151 (372)
T cd07853 81 VVTELMQ-SDLHKIIVS-----PQPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLAR 151 (372)
T ss_pred EEeeccc-cCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEecccccee
Confidence 9999996 577777743 3468999999999999999999999 899999999999999999999999999998
Q ss_pred cccCCCCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHH------------
Q 040242 509 AYDHNINPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDW------------ 575 (662)
Q Consensus 509 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~------------ 575 (662)
..............++..|+|||.+.+. .++.++||||+||++|||++|+.||..............
T Consensus 152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 152 VEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRS 231 (372)
T ss_pred ecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence 7654333333345678999999988764 478999999999999999999999976543322111100
Q ss_pred ----HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 576 ----VRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 576 ----~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
...............+.+........+.+.+|+.+||+.||.+|||+.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000000000000000011122235668899999999999999999999975
No 87
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.5e-37 Score=320.05 Aligned_cols=249 Identities=23% Similarity=0.359 Sum_probs=199.6
Q ss_pred eeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCc
Q 040242 363 VGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL 439 (662)
Q Consensus 363 LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 439 (662)
||+|+||+||++....+++.||+|++.... ....+.+..|+.++++++|+||+++.+++..+...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999998899999999986542 22345678899999999999999999999999999999999999999
Q ss_pred chhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcce
Q 040242 440 DKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQTT 519 (662)
Q Consensus 440 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~~ 519 (662)
..++..... ....+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++........ ...
T Consensus 81 ~~~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-~~~ 155 (280)
T cd05608 81 RYHIYNVDE-ENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS-KTK 155 (280)
T ss_pred HHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc-ccc
Confidence 988754321 24568999999999999999999999 8999999999999999999999999999986544322 223
Q ss_pred ecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHH
Q 040242 520 HIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQ 599 (662)
Q Consensus 520 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 599 (662)
...||+.|+|||.+.+..++.++|||||||++|||++|+.||......... ...... ..... ..++..
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~--~~~~~~---------~~~~~-~~~~~~ 223 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVEN--KELKQR---------ILNDS-VTYPDK 223 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhH--HHHHHh---------hcccC-CCCccc
Confidence 357899999999999999999999999999999999999999754322110 000110 01111 112233
Q ss_pred HHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 040242 600 EAELVLTLGLLCCDPHPDFRP-----STRRVVQF 628 (662)
Q Consensus 600 ~~~~l~~l~~~Cl~~dP~~RP-----t~~eVl~~ 628 (662)
....+.+++.+||+.||++|| ++++++++
T Consensus 224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 456688999999999999999 77788764
No 88
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-37 Score=318.41 Aligned_cols=260 Identities=27% Similarity=0.364 Sum_probs=209.9
Q ss_pred HhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh--------------hHHHHHHHHHHhhccccccceee
Q 040242 352 SATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ--------------GMKEFVAEITSMGRLRHRNLVQL 417 (662)
Q Consensus 352 ~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~--------------~~~~f~~Ei~~l~~l~H~niv~l 417 (662)
...++|+..+.||+|.||.|-+|+...+++.||||++.+.... ..++..+||.+|++++|||||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 3447899999999999999999999999999999999664211 13578999999999999999999
Q ss_pred eeeEecc--CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCC
Q 040242 418 HGWCRKQ--DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDA 495 (662)
Q Consensus 418 ~~~~~~~--~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~ 495 (662)
+++..+. +.+|||+|||..|.+...=-. ...|+..+.++++.++..||.|||. ++||||||||+|+||++
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p~d-----~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~ 245 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCPPD-----KPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSS 245 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCCCC-----cccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcC
Confidence 9998764 479999999999888665321 2239999999999999999999999 99999999999999999
Q ss_pred CCCeEEeeccccccccCCCC----CcceecccCCcccCcccccCCC----CCcchhHHHHHHHHHHHHcCCCCCCcccch
Q 040242 496 DLNPKLGDFGLARAYDHNIN----PQTTHIVGTLGYLAPELTRTGK----ATTSTDVFGFGTLMLEVACGRRPIEPQRTA 567 (662)
Q Consensus 496 ~~~~kL~DfGla~~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~----~t~ksDV~S~Gvvl~elltG~~p~~~~~~~ 567 (662)
++++||+|||.+..+..... ......+||+.|+|||...++. .+.+.||||+||+||.|+.|+.||.+....
T Consensus 246 ~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~ 325 (576)
T KOG0585|consen 246 DGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFEL 325 (576)
T ss_pred CCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHH
Confidence 99999999999987643321 2233468999999999887643 466889999999999999999999865321
Q ss_pred hhHHHHHHHHHHhhcCccccccCCCC-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 040242 568 MELVLVDWVRELHSQGQITRAIDPTL-DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDAS 634 (662)
Q Consensus 568 ~~~~l~~~~~~~~~~~~~~~~id~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~ 634 (662)
+++ .+++...| -...+++.+.+.+|++++|+.||++|.+..+|..+.....+
T Consensus 326 ----------~l~-----~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 326 ----------ELF-----DKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred ----------HHH-----HHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 111 12333344 22233567889999999999999999999999998754433
No 89
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.4e-37 Score=314.64 Aligned_cols=252 Identities=29% Similarity=0.409 Sum_probs=202.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|...+.||+|++|.||+|... ++..+|+|.+.... ....+|.+|+.++++++||||+++++++...+..++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 35677889999999999999884 35569999886543 23467899999999999999999999999988999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++... ...+++.+++.++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~l~~~i~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~ 154 (256)
T cd05113 82 SNGCLLNYLREH----GKRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE 154 (256)
T ss_pred CCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCc
Confidence 999999998643 2368999999999999999999999 899999999999999999999999999988654332
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
........++..|+|||.+.+..++.++|||||||++|||++ |+.||....... ..+.+ .++. .+.
T Consensus 155 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~---~~~~~----~~~~-----~~~- 221 (256)
T cd05113 155 YTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSE---TVEKV----SQGL-----RLY- 221 (256)
T ss_pred eeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHH----hcCC-----CCC-
Confidence 222222345678999999988889999999999999999998 999987543221 11111 1111 001
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
........+.+++.+||+.+|.+||++.++++.|+
T Consensus 222 --~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 222 --RPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --CCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 11123467889999999999999999999998774
No 90
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=5.6e-37 Score=331.74 Aligned_cols=252 Identities=24% Similarity=0.347 Sum_probs=198.0
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
.|+..+.||+|+||+||+|+...++..||||++.... ....+.+.+|+.++++++|+||+++++++...+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5778899999999999999999999999999997642 3345678999999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|+++|+|.+++... ..+++.....++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.+..
T Consensus 82 ~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~ 153 (381)
T cd05626 82 YIPGGDMMSLLIRM-----EVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRW 153 (381)
T ss_pred cCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCccccc
Confidence 99999999998543 457888889999999999999999 8999999999999999999999999999764321
Q ss_pred CCC----------------------------------------------CcceecccCCcccCcccccCCCCCcchhHHH
Q 040242 513 NIN----------------------------------------------PQTTHIVGTLGYLAPELTRTGKATTSTDVFG 546 (662)
Q Consensus 513 ~~~----------------------------------------------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S 546 (662)
... .......||+.|+|||.+.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS 233 (381)
T cd05626 154 THNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWS 233 (381)
T ss_pred ccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceee
Confidence 000 0012246999999999998888999999999
Q ss_pred HHHHHHHHHcCCCCCCcccchhhH-HHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHH--ccCCCCCCCCCHH
Q 040242 547 FGTLMLEVACGRRPIEPQRTAMEL-VLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLL--CCDPHPDFRPSTR 623 (662)
Q Consensus 547 ~Gvvl~elltG~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~--Cl~~dP~~RPt~~ 623 (662)
|||++|||++|+.||......... ....| ... ..-+....++ ..+.+++.+ |+..+|..||++.
T Consensus 234 lG~il~elltG~~Pf~~~~~~~~~~~i~~~------~~~---~~~~~~~~~s----~~~~dli~~ll~~~~~~~~R~~~~ 300 (381)
T cd05626 234 VGVILFEMLVGQPPFLAPTPTETQLKVINW------ENT---LHIPPQVKLS----PEAVDLITKLCCSAEERLGRNGAD 300 (381)
T ss_pred hhhHHHHHHhCCCCCcCCCHHHHHHHHHcc------ccc---cCCCCCCCCC----HHHHHHHHHHccCcccccCCCCHH
Confidence 999999999999999765432111 11100 000 0001111223 334455544 6677788899999
Q ss_pred HHHHH
Q 040242 624 RVVQF 628 (662)
Q Consensus 624 eVl~~ 628 (662)
+++++
T Consensus 301 ~~l~h 305 (381)
T cd05626 301 DIKAH 305 (381)
T ss_pred HHhcC
Confidence 99985
No 91
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.7e-37 Score=314.41 Aligned_cols=261 Identities=26% Similarity=0.429 Sum_probs=210.7
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|+||.||+|+...++..||||.+... .......+.+|+.++++++||||+++++++...+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 4688899999999999999999889999999987542 3344567899999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++++|.+++..... +...+++.++..++.|+++||.|||+ .+++|+||||+||+++.++.++|+|||++....
T Consensus 82 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 82 ELADAGDLSQMIKYFKK-QKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCcHHHHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence 99999999998854321 13458889999999999999999999 899999999999999999999999999988764
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
.... ......++..|+|||.+.+..++.++||||||+++|||++|+.|+....... . .+.... . ....+
T Consensus 158 ~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~-~---~~~~~~-~-----~~~~~ 226 (267)
T cd08228 158 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNL-F---SLCQKI-E-----QCDYP 226 (267)
T ss_pred chhH-HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccH-H---HHHHHH-h-----cCCCC
Confidence 3321 1223467889999999988888999999999999999999999986443211 1 111111 1 11111
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
.+ ........+.+++.+||+.+|++||++.+|++.|++.
T Consensus 227 ~~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 227 PL--PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred CC--ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 11 1223456788999999999999999999999999764
No 92
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=3.1e-37 Score=334.53 Aligned_cols=263 Identities=25% Similarity=0.367 Sum_probs=207.1
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCC-----CcEEEEEEeeccc-hhhHHHHHHHHHHhhccc-cccceeeeeeEeccCe
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPST-----GLEVAIKRVAHNS-RQGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQDE 426 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~-----g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~ 426 (662)
.++|...++||+|+||.||+|..... +..||||++.... ....+.+.+|+.+++++. ||||++++++|...+.
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 35788889999999999999986432 3469999997543 334567899999999996 9999999999999999
Q ss_pred eeEEEeccCCCCcchhccccccc---------------------------------------------------------
Q 040242 427 LLLVYDYVPNGSLDKLLFDNDQQ--------------------------------------------------------- 449 (662)
Q Consensus 427 ~~lV~E~~~~gsL~~~l~~~~~~--------------------------------------------------------- 449 (662)
.++|||||++|+|.++|+.....
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 99999999999999988643210
Q ss_pred ----------------------------------ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCC
Q 040242 450 ----------------------------------KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDA 495 (662)
Q Consensus 450 ----------------------------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~ 495 (662)
....+++.+++.++.|+++||.|||+ .+++||||||+|||++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEeC
Confidence 01248889999999999999999999 89999999999999999
Q ss_pred CCCeEEeeccccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHH
Q 040242 496 DLNPKLGDFGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLV 573 (662)
Q Consensus 496 ~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~ 573 (662)
++.+||+|||+++....... .......++..|+|||.+.+..++.++|||||||++|||++ |..||........ +.
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~--~~ 350 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST--FY 350 (400)
T ss_pred CCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH--HH
Confidence 99999999999986543221 12223456788999999988889999999999999999997 8899875422111 11
Q ss_pred HHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 040242 574 DWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDA 633 (662)
Q Consensus 574 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~ 633 (662)
..+ ..+. .. ..+......+.+++.+||+.+|++||++.+|.++|++..
T Consensus 351 ~~~----~~~~-----~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 351 NKI----KSGY-----RM---AKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHH----hcCC-----CC---CCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 111 1110 01 112234567889999999999999999999999998754
No 93
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=4.1e-37 Score=319.67 Aligned_cols=261 Identities=26% Similarity=0.443 Sum_probs=208.6
Q ss_pred cCCcccceeeeeCceEEEEEEeC-----CCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIP-----STGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~-----~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
++|...+.||+|+||+||++... .++..+|+|.+........+.+.+|+.++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 46788899999999999999852 3456799999977666667789999999999999999999999999999999
Q ss_pred EEeccCCCCcchhcccccc--------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEE
Q 040242 430 VYDYVPNGSLDKLLFDNDQ--------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKL 501 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~--------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL 501 (662)
||||+++++|.+++..... .+...+++.+++.++.|++.||.|||+ .+++||||||+||++++++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEe
Confidence 9999999999999864321 123459999999999999999999999 89999999999999999999999
Q ss_pred eeccccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHH
Q 040242 502 GDFGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVREL 579 (662)
Q Consensus 502 ~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~ 579 (662)
+|||+++....... .......++..|+|||.+.+..++.++|||||||+++||++ |..||....... ....+
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~---~~~~i--- 235 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE---VIECI--- 235 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH---
Confidence 99999986543211 11122345778999999988889999999999999999998 888886543221 11111
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 040242 580 HSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDA 633 (662)
Q Consensus 580 ~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~ 633 (662)
..+... .. .......+.+++.+||+.+|.+||++.+|++.|+...
T Consensus 236 -~~~~~~-----~~---~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~ 280 (288)
T cd05093 236 -TQGRVL-----QR---PRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA 280 (288)
T ss_pred -HcCCcC-----CC---CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 111111 11 1123356889999999999999999999999887653
No 94
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-37 Score=342.43 Aligned_cols=262 Identities=25% Similarity=0.347 Sum_probs=212.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccc-cccceeeeeeE-ec------cCe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLR-HRNLVQLHGWC-RK------QDE 426 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~-~~------~~~ 426 (662)
.+.++.++|.+|||+.||.+.+...|..+|+|++-...+...+.+.+|+.+|++|+ |+|||.+++.. .. .-+
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 34566889999999999999998777999999998888888999999999999997 99999999932 11 137
Q ss_pred eeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccc
Q 040242 427 LLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGL 506 (662)
Q Consensus 427 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGl 506 (662)
.+|.||||++|+|-++|.... ...|++.++++|+.++++|+++||. +..+|||||||-+||||..++..||||||.
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rl---q~~lte~eVLkIf~dv~~AVa~mH~-~~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRL---QTRLTEDEVLKIFYDVCEAVAAMHY-LKPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred EEeehhhccCCcHHHHHHHHH---hccCChHHHHHHHHHHHHHHHHHhc-CCCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 899999999999999997554 3449999999999999999999998 457799999999999999999999999998
Q ss_pred cccccCCCC-Cc-------ceecccCCcccCcccc---cCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHH
Q 040242 507 ARAYDHNIN-PQ-------TTHIVGTLGYLAPELT---RTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDW 575 (662)
Q Consensus 507 a~~~~~~~~-~~-------~~~~~gt~~y~aPE~~---~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~ 575 (662)
+.-.-.... .. .-...-|+.|.|||++ .+...++|+|||+|||+||-|+....||+....
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~--------- 263 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK--------- 263 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc---------
Confidence 864322211 00 0112458999999976 456789999999999999999999999986532
Q ss_pred HHHHhhcCccccccCCCCCC-CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc----CCCCCCCC
Q 040242 576 VRELHSQGQITRAIDPTLDY-FDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR----DASLPQAP 639 (662)
Q Consensus 576 ~~~~~~~~~~~~~id~~l~~-~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~----~~~~p~~p 639 (662)
..+++..... -.+.+...+..||+.||++||.+||++.+|++.+.. .-++++.+
T Consensus 264 ----------laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~~~~~~~~ 322 (738)
T KOG1989|consen 264 ----------LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKPCPIPDIY 322 (738)
T ss_pred ----------eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCCCCccccc
Confidence 2333433311 125788899999999999999999999999987743 34444444
No 95
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.1e-37 Score=318.86 Aligned_cols=254 Identities=24% Similarity=0.336 Sum_probs=201.5
Q ss_pred eeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCc
Q 040242 363 VGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL 439 (662)
Q Consensus 363 LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 439 (662)
||+|+||.||++....+|+.||+|++.... ....+.+..|++++++++||||+++++++..+...++||||+++++|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999998899999999986532 12234556799999999999999999999999999999999999999
Q ss_pred chhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcce
Q 040242 440 DKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQTT 519 (662)
Q Consensus 440 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~~ 519 (662)
.+++.... ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++....... ...
T Consensus 81 ~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~ 152 (277)
T cd05607 81 KYHIYNVG---ERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TIT 152 (277)
T ss_pred HHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eee
Confidence 98886442 3458899999999999999999999 899999999999999999999999999998664332 223
Q ss_pred ecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHH
Q 040242 520 HIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQ 599 (662)
Q Consensus 520 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 599 (662)
...|+..|+|||++.+..++.++||||+||++|||++|+.||........ ..+..+.... ..+.. ....
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~-----~~~~~----~~~~ 221 (277)
T cd05607 153 QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVA--KEELKRRTLE-----DEVKF----EHQN 221 (277)
T ss_pred ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhh--HHHHHHHhhc-----ccccc----cccc
Confidence 35689999999999888899999999999999999999999975432111 1111111111 01110 0112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCC
Q 040242 600 EAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDASL 635 (662)
Q Consensus 600 ~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~~ 635 (662)
....+.+|+.+||+.||++||+++|+++.+..+.-+
T Consensus 222 ~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f 257 (277)
T cd05607 222 FTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFF 257 (277)
T ss_pred CCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhh
Confidence 345678999999999999999998877666655444
No 96
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=2.4e-37 Score=320.38 Aligned_cols=263 Identities=24% Similarity=0.373 Sum_probs=204.1
Q ss_pred cCCcccceeeeeCceEEEEEEe----CCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEecc--Ceee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVI----PSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ--DELL 428 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~----~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~ 428 (662)
++|+..+.||+|+||.||++.. ..++..||+|++........+.+.+|++++++++||||+++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 4678889999999999999984 346789999999877777778899999999999999999999987543 4689
Q ss_pred EEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccc
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLAR 508 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~ 508 (662)
+||||+++++|.+++... ...+++..++.++.|++.||.|||+ .+++||||||+||++++++.+||+|||+++
T Consensus 84 lv~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~ 156 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH----RERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTK 156 (284)
T ss_pred EEEEecCCCCHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcccc
Confidence 999999999999998543 3458999999999999999999999 899999999999999999999999999998
Q ss_pred cccCCCCCc--ceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhh---------HHHHHHHH
Q 040242 509 AYDHNINPQ--TTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAME---------LVLVDWVR 577 (662)
Q Consensus 509 ~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~---------~~l~~~~~ 577 (662)
......... .....++..|+|||++.+..++.++|||||||++|||++|..++........ ......+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05081 157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLI 236 (284)
T ss_pred cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHH
Confidence 764432211 1112334569999999888899999999999999999998876543211000 00000000
Q ss_pred HHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 578 ELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 578 ~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
+....+ ............+.+++.+||+.+|++|||+.||++.|+..
T Consensus 237 ~~~~~~--------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 237 ELLKNN--------GRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHhcC--------CcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 100000 00111223446788999999999999999999999999753
No 97
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=8.8e-38 Score=330.64 Aligned_cols=244 Identities=27% Similarity=0.354 Sum_probs=198.6
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG 437 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 437 (662)
+.||+|+||.||++....++..||+|.+.... ......+..|++++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999998899999999997642 334567788999999999999999999999999999999999999
Q ss_pred CcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCc
Q 040242 438 SLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQ 517 (662)
Q Consensus 438 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~ 517 (662)
+|..++.. ...+++..+..++.||+.||.|||+. .+|+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~-~~ 152 (325)
T cd05594 81 ELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG-AT 152 (325)
T ss_pred cHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCC-cc
Confidence 99988843 34589999999999999999999962 689999999999999999999999999987533221 12
Q ss_pred ceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCC
Q 040242 518 TTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFD 597 (662)
Q Consensus 518 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 597 (662)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||......... ..+. .. ... ++
T Consensus 153 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~---~~i~----~~------~~~---~p 216 (325)
T cd05594 153 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF---ELIL----ME------EIR---FP 216 (325)
T ss_pred cccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHH---HHHh----cC------CCC---CC
Confidence 23356899999999999889999999999999999999999999754332111 1110 00 011 12
Q ss_pred HHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 040242 598 PQEAELVLTLGLLCCDPHPDFRP-----STRRVVQF 628 (662)
Q Consensus 598 ~~~~~~l~~l~~~Cl~~dP~~RP-----t~~eVl~~ 628 (662)
......+.+++.+||+.||++|+ ++.+++++
T Consensus 217 ~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 217 RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 22345678899999999999996 89999865
No 98
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4.3e-37 Score=318.11 Aligned_cols=257 Identities=27% Similarity=0.415 Sum_probs=203.0
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCc----EEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGL----EVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~----~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
++|+..+.||+|+||.||+|.+..++. .+++|.+.... .....++..|+..+++++||||+++++++. ....++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence 457778999999999999999876665 47788875443 334567888999999999999999999885 455789
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
++||+++|+|.+++... ...++|..++.++.|++.||.|||+ .+++||||||+||++++++.+||+|||+++.
T Consensus 86 i~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~ 158 (279)
T cd05111 86 VTQLSPLGSLLDHVRQH----RDSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADL 158 (279)
T ss_pred EEEeCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCcccee
Confidence 99999999999999654 3468999999999999999999999 8999999999999999999999999999986
Q ss_pred ccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCcccc
Q 040242 510 YDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITR 587 (662)
Q Consensus 510 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 587 (662)
....... ......++..|+|||.+.++.++.++|||||||++|||++ |+.||....... +.+++ ..+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~---~~~~~----~~~~~~- 230 (279)
T cd05111 159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHE---VPDLL----EKGERL- 230 (279)
T ss_pred ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH---HHHHH----HCCCcC-
Confidence 5433221 2233456789999999988899999999999999999998 999987543221 11111 111111
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 040242 588 AIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDAS 634 (662)
Q Consensus 588 ~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~ 634 (662)
..+. .....+..++.+|+..+|++||++.|+++.|.....
T Consensus 231 -~~~~------~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 231 -AQPQ------ICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred -CCCC------CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 1111 123456778899999999999999999999977543
No 99
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.2e-37 Score=330.97 Aligned_cols=259 Identities=22% Similarity=0.261 Sum_probs=203.7
Q ss_pred HHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccC
Q 040242 349 ELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD 425 (662)
Q Consensus 349 el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~ 425 (662)
++....++|+..+.||+|+||.||++....+++.+|+|.+.+.. ....+.+.+|+.+++.++||||+++++++..++
T Consensus 37 ~~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (370)
T cd05621 37 KLQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK 116 (370)
T ss_pred hcCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 34445678999999999999999999998899999999986532 223456788999999999999999999999999
Q ss_pred eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecc
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFG 505 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 505 (662)
..++||||+++|+|.+++.. ..+++.....++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 117 ~~~lv~Ey~~gg~L~~~l~~------~~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG 187 (370)
T cd05621 117 YLYMVMEYMPGGDLVNLMSN------YDVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFG 187 (370)
T ss_pred EEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecc
Confidence 99999999999999999843 247888899999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCCCcceecccCCcccCcccccCC----CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhh
Q 040242 506 LARAYDHNINPQTTHIVGTLGYLAPELTRTG----KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHS 581 (662)
Q Consensus 506 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~ 581 (662)
++...............||+.|+|||.+.+. .++.++||||+||++|||++|+.||........ ......
T Consensus 188 ~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~------~~~i~~ 261 (370)
T cd05621 188 TCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGT------YSKIMD 261 (370)
T ss_pred cceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHH------HHHHHh
Confidence 9987654322223345799999999988653 378899999999999999999999975532211 111111
Q ss_pred cCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 040242 582 QGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDF--RPSTRRVVQF 628 (662)
Q Consensus 582 ~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~eVl~~ 628 (662)
... .+ .. .........+.+++..|+..++.+ ||++.|++++
T Consensus 262 ~~~---~~--~~-p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 262 HKN---SL--NF-PEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCc---cc--CC-CCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 100 00 01 011123455677788888765544 8999999986
No 100
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=3.8e-37 Score=318.01 Aligned_cols=260 Identities=23% Similarity=0.380 Sum_probs=206.5
Q ss_pred hccCCcccceeeeeCceEEEEEEeCC-----CCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCe
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPS-----TGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDE 426 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~-----~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~ 426 (662)
++++|...+.||+|++|.||+|.+.. .+..|++|.+.... ......|..|+.++++++|+||+++++++...+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 35678889999999999999999976 66789999886543 3445679999999999999999999999999999
Q ss_pred eeEEEeccCCCCcchhcccccc--cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCC---CeEE
Q 040242 427 LLLVYDYVPNGSLDKLLFDNDQ--QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADL---NPKL 501 (662)
Q Consensus 427 ~~lV~E~~~~gsL~~~l~~~~~--~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kL 501 (662)
.++||||+++++|.+++..... .....++|.+++.++.||+.||+|||+ .+++||||||+||+++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcceEe
Confidence 9999999999999999965431 112368999999999999999999999 8999999999999998764 5999
Q ss_pred eeccccccccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHH
Q 040242 502 GDFGLARAYDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVREL 579 (662)
Q Consensus 502 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~ 579 (662)
+|||+++........ .......+..|+|||++.+..++.++|||||||++|||++ |+.||........ .+.+
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~---~~~~--- 234 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV---MEFV--- 234 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHH---HHHH---
Confidence 999999876322111 1112234568999999988899999999999999999997 9999875433211 1111
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 580 HSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 580 ~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
..... ...+...+..+.+++.+|++.+|++||++.+|+++|.
T Consensus 235 ~~~~~---------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 235 TGGGR---------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HcCCc---------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 11100 1112233567889999999999999999999999986
No 101
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.4e-38 Score=298.63 Aligned_cols=250 Identities=27% Similarity=0.383 Sum_probs=212.0
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
.++|++.+.||+|.||.||.|..+.++-.||+|++.+.+ .+...++.+|+++-+.|+||||+++++|+.+....||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 367899999999999999999999999999999997753 33456899999999999999999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
+||.++|+|...|.+.. ...++.......+.|+|.||.|+|. ++|+||||||+|+|++..+..||+|||.+...
T Consensus 101 lEya~~gel~k~L~~~~---~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~ 174 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGR---MKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA 174 (281)
T ss_pred EEecCCchHHHHHHhcc---cccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeec
Confidence 99999999999996543 4557788888999999999999999 99999999999999999999999999988764
Q ss_pred cCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
. .......+||..|++||+..+...+...|+|++|++.||++.|.+||+.....+ ....+. -.+..+
T Consensus 175 p---~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~e---tYkrI~-------k~~~~~ 241 (281)
T KOG0580|consen 175 P---SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSE---TYKRIR-------KVDLKF 241 (281)
T ss_pred C---CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHH---HHHHHH-------HccccC
Confidence 4 223445689999999999999999999999999999999999999998654221 111111 122222
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
| ........+++.+|+..+|.+|.+..||+++
T Consensus 242 p------~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 242 P------STISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred C------cccChhHHHHHHHHhccCccccccHHHHhhh
Confidence 2 3345567788999999999999999999976
No 102
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=9e-37 Score=313.37 Aligned_cols=259 Identities=27% Similarity=0.393 Sum_probs=207.9
Q ss_pred HHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeee
Q 040242 349 ELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELL 428 (662)
Q Consensus 349 el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 428 (662)
|++.+++++.....||+|+||.||+|.+..++..|++|.+........+.+.+|+.++++++|+||+++++++..++..+
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 34556777777889999999999999998888999999998776667778999999999999999999999999999999
Q ss_pred EEEeccCCCCcchhcccccccccccc--cHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCC-CCCeEEeecc
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQKKKIL--NWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDA-DLNPKLGDFG 505 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~DfG 505 (662)
+|+||+++++|.+++... ...+ ++..+..++.|+++||.|||+ .+|+||||||+||+++. ++.++|+|||
T Consensus 82 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~~l~dfg 154 (268)
T cd06624 82 IFMEQVPGGSLSALLRSK----WGPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVVKISDFG 154 (268)
T ss_pred EEEecCCCCCHHHHHHHh----cccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeEEEecch
Confidence 999999999999999643 1234 788888999999999999999 89999999999999986 6789999999
Q ss_pred ccccccCCCCCcceecccCCcccCcccccCCC--CCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcC
Q 040242 506 LARAYDHNINPQTTHIVGTLGYLAPELTRTGK--ATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQG 583 (662)
Q Consensus 506 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~ 583 (662)
++....... .......++..|+|||++.... ++.++||||||+++|||++|+.|+......... .|.....
T Consensus 155 ~~~~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~---~~~~~~~--- 227 (268)
T cd06624 155 TSKRLAGIN-PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAA---MFKVGMF--- 227 (268)
T ss_pred hheecccCC-CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhh---Hhhhhhh---
Confidence 987654322 2222345789999999986543 788999999999999999999998643321111 1110000
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 584 QITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 584 ~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
... ...+......+..++.+||+.+|++||++.|++++
T Consensus 228 ----~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 228 ----KIH---PEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ----ccC---CCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 011 12233345668889999999999999999999864
No 103
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.2e-37 Score=314.27 Aligned_cols=255 Identities=24% Similarity=0.349 Sum_probs=204.7
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..+.||+|+||.||+|+...+++.||+|++..........+.+|+.++++++||||+++++++..++..++||||+
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~ 88 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYC 88 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCC
Confidence 46888999999999999999998889999999997665555567889999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.. ...+++.++..++.|+++||.|||+ .+|+||||||+||+++.++.+||+|||++.......
T Consensus 89 ~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 89 GGGSLQDIYHV-----TGPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred CCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 99999998853 3458899999999999999999999 899999999999999999999999999998664322
Q ss_pred CCcceecccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 515 NPQTTHIVGTLGYLAPELTR---TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
. ......|+..|+|||.+. ...++.++|||||||++|||++|+.|+.......... .+ ... ....+
T Consensus 161 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~--~~-----~~~---~~~~~ 229 (267)
T cd06646 161 A-KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF--LM-----SKS---NFQPP 229 (267)
T ss_pred c-ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhhe--ee-----ecC---CCCCC
Confidence 1 122346889999999874 3457889999999999999999999986432211100 00 000 00111
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
.... .......+.+++.+||+.+|++||++++++++|
T Consensus 230 ~~~~-~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 230 KLKD-KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCcc-ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 1111 112346788999999999999999999999865
No 104
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=7.6e-37 Score=311.68 Aligned_cols=254 Identities=31% Similarity=0.505 Sum_probs=204.7
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhH--HHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGM--KEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~--~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
|+..+.||+|+||+||++....+++.+|+|++........ .....|+..+++++||||+++++++......++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 5678899999999999999999999999999987644332 23456999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++. +...+++..++.++.|+++||.+||+ .+++|+||||+||++++++.++|+|||.+.... ..
T Consensus 81 ~~~~L~~~l~-----~~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-~~ 151 (260)
T PF00069_consen 81 PGGSLQDYLQ-----KNKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-EN 151 (260)
T ss_dssp TTEBHHHHHH-----HHSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEEST-ST
T ss_pred cccccccccc-----cccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc-cc
Confidence 9999999996 24678999999999999999999999 899999999999999999999999999998642 22
Q ss_pred CCcceecccCCcccCccccc-CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTR-TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
........++..|+|||.+. +...+.++||||+|+++++|++|+.|+.................. ..... .
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~---~- 223 (260)
T PF00069_consen 152 NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKR----PLPSS---S- 223 (260)
T ss_dssp TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHT----HHHHH---T-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccc----ccccc---c-
Confidence 23344567899999999998 788999999999999999999999999865222222111111100 00000 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.........+.+++.+||+.||++||++.+++++
T Consensus 224 -~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 224 -QQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp -TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred -cccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 0000112788999999999999999999999863
No 105
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.1e-36 Score=327.17 Aligned_cols=203 Identities=25% Similarity=0.384 Sum_probs=177.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|+||+||++....+++.||||++.... ......+..|+.++.+++|+||+++++.+.....+++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46888999999999999999998889999999997642 233456788999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++|+|.+++.. ...+++.+...++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~ 152 (363)
T cd05628 81 EFLPGGDMMTLLMK-----KDTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK 152 (363)
T ss_pred cCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence 99999999999854 3468899999999999999999999 899999999999999999999999999987543
Q ss_pred CCCC----------------------------------CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcC
Q 040242 512 HNIN----------------------------------PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACG 557 (662)
Q Consensus 512 ~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG 557 (662)
.... .......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G 232 (363)
T cd05628 153 KAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232 (363)
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhC
Confidence 2110 001234799999999999888899999999999999999999
Q ss_pred CCCCCccc
Q 040242 558 RRPIEPQR 565 (662)
Q Consensus 558 ~~p~~~~~ 565 (662)
+.||....
T Consensus 233 ~~Pf~~~~ 240 (363)
T cd05628 233 YPPFCSET 240 (363)
T ss_pred CCCCCCCC
Confidence 99997544
No 106
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.8e-37 Score=327.74 Aligned_cols=253 Identities=23% Similarity=0.315 Sum_probs=201.0
Q ss_pred CCcccceeeeeCceEEEEEEeC---CCCcEEEEEEeeccc----hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCee
Q 040242 356 GFREKNLVGSGGFGKVYRGVIP---STGLEVAIKRVAHNS----RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDEL 427 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~---~~g~~vavK~~~~~~----~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~ 427 (662)
+|+..+.||+|+||.||+++.. .++..||+|++.+.. ....+.+..|+.++.++ +|+||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 4778899999999999998863 467899999986532 23345678899999999 599999999999999999
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccc
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLA 507 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla 507 (662)
++||||+++|+|.+++.. ...+++.+...++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 81 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~~ 152 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ-----RDNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGLS 152 (332)
T ss_pred EEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcCC
Confidence 999999999999999853 3458899999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccc
Q 040242 508 RAYDHNINPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQIT 586 (662)
Q Consensus 508 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 586 (662)
+..............||+.|+|||.+.+. .++.++|||||||++|||++|+.||.......... .+.....
T Consensus 153 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~---~~~~~~~----- 224 (332)
T cd05614 153 KEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQS---EVSRRIL----- 224 (332)
T ss_pred ccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHH---HHHHHHh-----
Confidence 87644433334456799999999998765 47889999999999999999999997432211111 1111111
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 040242 587 RAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRP-----STRRVVQF 628 (662)
Q Consensus 587 ~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~eVl~~ 628 (662)
..++.+ +......+.+++.+||+.||++|| ++++++++
T Consensus 225 -~~~~~~---~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 225 -KCDPPF---PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred -cCCCCC---CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 112222 222345677889999999999999 77788764
No 107
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4.2e-37 Score=313.75 Aligned_cols=251 Identities=29% Similarity=0.421 Sum_probs=201.2
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccC
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVP 435 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 435 (662)
+|+..+.||+|++|.||++.+. .+..+|+|.+..... ...+|.+|++++++++|+||+++++++...+..++||||++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 4677889999999999999985 466799998864332 34578899999999999999999999999999999999999
Q ss_pred CCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC
Q 040242 436 NGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN 515 (662)
Q Consensus 436 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~ 515 (662)
+++|.+++... ...+++..++.++.|+++||+|||+ .+++||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~ 155 (256)
T cd05059 83 NGCLLNYLRER----KGKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY 155 (256)
T ss_pred CCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccccc
Confidence 99999998644 2368999999999999999999999 8999999999999999999999999999986543221
Q ss_pred CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 516 PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 516 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
.......++..|+|||.+.+..++.++||||||+++|||++ |+.||....... ....+. .+ ....
T Consensus 156 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~---~~~~~~----~~-----~~~~-- 221 (256)
T cd05059 156 TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE---VVESVS----AG-----YRLY-- 221 (256)
T ss_pred cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH---HHHHHH----cC-----CcCC--
Confidence 11112234568999999988889999999999999999999 788887543221 111111 11 1111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
.+...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 222 -~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~ 256 (256)
T cd05059 222 -RPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT 256 (256)
T ss_pred -CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence 11234567889999999999999999999999873
No 108
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.5e-37 Score=317.70 Aligned_cols=259 Identities=24% Similarity=0.393 Sum_probs=204.7
Q ss_pred cCCcccceeeeeCceEEEEEEeC----CCCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIP----STGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~----~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
++|+..+.||+|+||.||+|... ..+..|++|.+... ..+....+.+|+.++++++||||+++++++......++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 45777899999999999999852 34578999999643 34445778999999999999999999999999999999
Q ss_pred EEeccCCCCcchhcccccc------------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCC
Q 040242 430 VYDYVPNGSLDKLLFDNDQ------------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADL 497 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~ 497 (662)
||||+++++|.+++..... .....+++.+.+.++.|++.||.|||+ .+++||||||+||++++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCC
Confidence 9999999999999853211 112458899999999999999999999 8999999999999999999
Q ss_pred CeEEeeccccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHH
Q 040242 498 NPKLGDFGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDW 575 (662)
Q Consensus 498 ~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~ 575 (662)
.+||+|||+++....... .......++..|+|||++.+..++.++|||||||++|||++ |..||...... .+.+.
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~---~~~~~ 238 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQ---EVIEM 238 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH---HHHHH
Confidence 999999999986533221 11222345678999999988889999999999999999998 88898654321 11111
Q ss_pred HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 576 VRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 576 ~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
+ ...... ..+......+..++.+|++.+|.+||++.+|.++|..
T Consensus 239 ~----~~~~~~--------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 239 V----RKRQLL--------PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred H----HcCCcC--------CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 1 111110 1122334567889999999999999999999999864
No 109
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=6.8e-37 Score=314.17 Aligned_cols=256 Identities=29% Similarity=0.493 Sum_probs=206.0
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCc---EEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGL---EVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~---~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
++|+..+.||+|++|.||+|..+.++. .+++|.+... .....+++..|++++++++|+|++++++++...+..++|
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII 84 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence 567888999999999999999865544 7999998655 334456789999999999999999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
|||+++++|.+++... ...+++.+++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 85 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 85 TEYMENGALDKYLRDH----DGEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCCccceec
Confidence 9999999999998543 3468999999999999999999999 89999999999999999999999999999866
Q ss_pred cCCCCCcce--ecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCcccc
Q 040242 511 DHNINPQTT--HIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITR 587 (662)
Q Consensus 511 ~~~~~~~~~--~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 587 (662)
......... ....+..|+|||++....++.++|||||||++|||++ |+.||...... ++.... ..+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~------~~~~~i-~~~~--- 227 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNH------EVMKAI-NDGF--- 227 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHH------HHHHHH-hcCC---
Confidence 543222111 1223457999999988889999999999999999997 99999654321 111111 1110
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 588 AIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 588 ~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
..+. .......+.+++.+|++.+|++||++.+|++.|++.
T Consensus 228 -~~~~----~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 228 -RLPA----PMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -CCCC----CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0111 112345688999999999999999999999999764
No 110
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=4.7e-37 Score=325.62 Aligned_cols=250 Identities=24% Similarity=0.314 Sum_probs=198.3
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
++||+|+||.||++....+++.||+|++... .....+.+..|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 4699999999999999989999999999764 233445678888888776 899999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|+|..++.. ...+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 ~~L~~~~~~-----~~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~-~~ 151 (329)
T cd05618 81 GDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GD 151 (329)
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC-CC
Confidence 999888743 3458999999999999999999999 89999999999999999999999999998753222 12
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccch--hhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTA--MELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~--~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
......||..|+|||++.+..++.++|||||||++|||++|+.||...... .......++.+...... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~---------~ 222 (329)
T cd05618 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ---------I 222 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC---------C
Confidence 223457899999999999889999999999999999999999999632111 11111223322222111 1
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCC------HHHHHHH
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPS------TRRVVQF 628 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt------~~eVl~~ 628 (662)
..+......+..++.+||+.||++||+ +.+++++
T Consensus 223 ~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 223 RIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred CCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 122234456788999999999999998 5677654
No 111
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.6e-37 Score=326.31 Aligned_cols=243 Identities=23% Similarity=0.374 Sum_probs=196.4
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
++||+|+||+||+++...+++.||||++.... ....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999998889999999997542 23456677888888876 699999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|+|.+++... ..+++..+..++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~i~~~-----~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~-~ 151 (320)
T cd05590 81 GDLMFHIQKS-----RRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG-K 151 (320)
T ss_pred chHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC-C
Confidence 9999988533 458899999999999999999999 899999999999999999999999999987543221 2
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYF 596 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 596 (662)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||....... +.. .. ..+. . ..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~---~~~---~i-~~~~------~---~~ 215 (320)
T cd05590 152 TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDD---LFE---AI-LNDE------V---VY 215 (320)
T ss_pred cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHH---HHH---HH-hcCC------C---CC
Confidence 2234578999999999998889999999999999999999999997654221 111 11 1111 0 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCH------HHHHHH
Q 040242 597 DPQEAELVLTLGLLCCDPHPDFRPST------RRVVQF 628 (662)
Q Consensus 597 ~~~~~~~l~~l~~~Cl~~dP~~RPt~------~eVl~~ 628 (662)
+......+.+++.+||+.||.+||++ ++++++
T Consensus 216 ~~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 216 PTWLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 11234567889999999999999998 666653
No 112
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.8e-37 Score=325.62 Aligned_cols=247 Identities=23% Similarity=0.332 Sum_probs=198.8
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhcccc-ccceeeeeeEeccCeeeEEE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRH-RNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H-~niv~l~~~~~~~~~~~lV~ 431 (662)
+|+..+.||+|+||.||+|+...+++.||||++.... ....+.+..|..++..++| ++|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4778899999999999999998889999999997642 3345677889999999976 45888999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++|+|.+++.. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~~g~L~~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05587 81 EYVNGGDLMYHIQQ-----VGKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKENI 152 (324)
T ss_pred cCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceecC
Confidence 99999999998853 2457889999999999999999999 899999999999999999999999999987532
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
.. ........||+.|+|||++.+..++.++||||+||++|||++|+.||....... +...+. .. ..
T Consensus 153 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~---~~~~i~----~~------~~ 218 (324)
T cd05587 153 FG-GKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---LFQSIM----EH------NV 218 (324)
T ss_pred CC-CCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH---HHHHHH----cC------CC
Confidence 21 122334578999999999998889999999999999999999999997554221 111111 10 01
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPST-----RRVVQ 627 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~eVl~ 627 (662)
.++......+.+++.+||+.||.+||+. .++.+
T Consensus 219 ---~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 256 (324)
T cd05587 219 ---SYPKSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIRE 256 (324)
T ss_pred ---CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1122234567889999999999999976 56654
No 113
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.5e-38 Score=314.36 Aligned_cols=249 Identities=25% Similarity=0.425 Sum_probs=212.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
.+|++.+.||+|.||+|-++.....|+.||||.+++. .++..-.+.+||++|+.|+||||++++..|+.++.+.+||
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivM 132 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVM 132 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEE
Confidence 4577788999999999999999889999999998765 4455567889999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||..+|.|.+++.+ +..|++.+...++.||..|+.|+|. ++++|||||.+|||||.|+++||+||||+.++.
T Consensus 133 EYaS~GeLYDYiSe-----r~~LsErEaRhfFRQIvSAVhYCHk---nrVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 133 EYASGGELYDYISE-----RGSLSEREARHFFRQIVSAVHYCHK---NRVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EecCCccHHHHHHH-----hccccHHHHHHHHHHHHHHHHHHhh---ccceecccchhheeecCCCCeeeeccchhhhhc
Confidence 99999999999954 4679999999999999999999999 899999999999999999999999999999887
Q ss_pred CCCCCcceecccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKA-TTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
... .....+|++-|.+||++++..| .+..|-||+||+||.|+.|..||++.+-. .+ +++ ...|.
T Consensus 205 ~~k--fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk---~l---vrQ-Is~Ga------ 269 (668)
T KOG0611|consen 205 DKK--FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHK---RL---VRQ-ISRGA------ 269 (668)
T ss_pred ccc--HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHH---HH---HHH-hhccc------
Confidence 543 3445799999999999998876 67899999999999999999999976421 11 222 11121
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
...++.+....-|++|||-.||++|-|+.+|..+..
T Consensus 270 ----YrEP~~PSdA~gLIRwmLmVNP~RRATieDiAsHWW 305 (668)
T KOG0611|consen 270 ----YREPETPSDASGLIRWMLMVNPERRATIEDIASHWW 305 (668)
T ss_pred ----ccCCCCCchHHHHHHHHHhcCcccchhHHHHhhhhe
Confidence 112234445678999999999999999999999873
No 114
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=5.1e-37 Score=325.37 Aligned_cols=250 Identities=24% Similarity=0.317 Sum_probs=199.5
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
++||+|+||.||++....+++.||+|++.... ....+.+..|..++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999999899999999997642 33445678899999888 799999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|+|.+++.. ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 g~L~~~~~~-----~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~ 151 (329)
T cd05588 81 GDLMFHMQR-----QRKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GD 151 (329)
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCccccccccC-CC
Confidence 999988843 3468999999999999999999999 89999999999999999999999999998743221 12
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchh--hHHHHHHHHHHhhcCccccccCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAM--ELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~--~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....++..+....... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~------~-- 223 (329)
T cd05588 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI------R-- 223 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC------C--
Confidence 2234578999999999998889999999999999999999999996322111 11122233332222111 1
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCC------HHHHHHH
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPS------TRRVVQF 628 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt------~~eVl~~ 628 (662)
.+......+.+++.+||+.||.+||+ +++++++
T Consensus 224 -~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 224 -IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred -CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 12223456788999999999999997 7788754
No 115
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=9e-37 Score=312.94 Aligned_cols=261 Identities=27% Similarity=0.454 Sum_probs=210.9
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|++|.||++....++..++||.+... ......++.+|+.+++.++|+||+++++++..++..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4677889999999999999999888999999988653 2334568899999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++++|.+++..... ....+++.+++.++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||++....
T Consensus 82 e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 82 ELADAGDLSRMIKHFKK-QKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 99999999999864321 24568999999999999999999999 899999999999999999999999999988664
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
.... ......++..|+|||.+.+..++.++||||||+++|||++|..||........ . +... +.....+
T Consensus 158 ~~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~---~~~~------~~~~~~~ 226 (267)
T cd08229 158 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLY-S---LCKK------IEQCDYP 226 (267)
T ss_pred cCCc-ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHH-H---Hhhh------hhcCCCC
Confidence 4322 12234688999999999888899999999999999999999999865432211 1 1111 0111111
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
.+ ........+.+++.+||+.+|++||||.+|++.+++.
T Consensus 227 ~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 227 PL--PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CC--CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 11 1123456788999999999999999999999998753
No 116
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6e-37 Score=313.27 Aligned_cols=253 Identities=27% Similarity=0.432 Sum_probs=203.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..+.||+|++|.||+|... .+..+|+|.+..... ..+.+.+|+.++++++|+|++++++++. ....+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 6 ESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred HHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 46778899999999999999885 566799999865433 3467899999999999999999999885 45689999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.... ...+++.+++.++.|++.||.|||+ .+++||||||+||++++++.++|+|||++.......
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05070 83 SKGSLLDFLKDGE---GRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence 9999999996542 3458999999999999999999999 899999999999999999999999999998765433
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
........++..|+|||.+.+..++.++||||||+++|||++ |+.||...... ...+.+. .+ ..
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~---~~~~~~~----~~-----~~--- 221 (260)
T cd05070 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR---EVLEQVE----RG-----YR--- 221 (260)
T ss_pred cccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHH----cC-----CC---
Confidence 222222345678999999988889999999999999999999 88888654322 1111111 11 00
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
...+......+.+++.+|++.+|++|||+.++.+.|+.
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 222 MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11122345668899999999999999999999999864
No 117
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.6e-37 Score=326.69 Aligned_cols=262 Identities=24% Similarity=0.360 Sum_probs=204.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCC-----CCcEEEEEEeeccc-hhhHHHHHHHHHHhhcc-ccccceeeeeeEecc-Ce
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPS-----TGLEVAIKRVAHNS-RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQ-DE 426 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~-----~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~-~~ 426 (662)
++|+..+.||+|+||.||+|...+ +++.||+|++.... ....+.+..|+.++.++ +|+||++++++|... ..
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~ 86 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGP 86 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCC
Confidence 468889999999999999997533 34789999986542 33456788999999999 899999999988654 56
Q ss_pred eeEEEeccCCCCcchhccccccc--------------------------------------------------------c
Q 040242 427 LLLVYDYVPNGSLDKLLFDNDQQ--------------------------------------------------------K 450 (662)
Q Consensus 427 ~~lV~E~~~~gsL~~~l~~~~~~--------------------------------------------------------~ 450 (662)
++++|||+++++|.+++...... .
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 88999999999999988532110 0
Q ss_pred cccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC-CcceecccCCcccC
Q 040242 451 KKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN-PQTTHIVGTLGYLA 529 (662)
Q Consensus 451 ~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~a 529 (662)
...++|..+..++.||++||.|||+ .+|+||||||+|||++.++.+||+|||+++.+..... .......++..|+|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~a 243 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMA 243 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccC
Confidence 2368999999999999999999999 8999999999999999999999999999987543221 11223456778999
Q ss_pred cccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHH
Q 040242 530 PELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLG 608 (662)
Q Consensus 530 PE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~ 608 (662)
||++.+..++.++|||||||++|||++ |+.||......+ .+. .....+.. + ..+......+.+++
T Consensus 244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~--~~~----~~~~~~~~-----~---~~~~~~~~~~~~l~ 309 (337)
T cd05054 244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE--EFC----RRLKEGTR-----M---RAPEYATPEIYSIM 309 (337)
T ss_pred cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH--HHH----HHHhccCC-----C---CCCccCCHHHHHHH
Confidence 999999999999999999999999998 999987533211 111 11111110 0 11122345688999
Q ss_pred HHccCCCCCCCCCHHHHHHHHhcCC
Q 040242 609 LLCCDPHPDFRPSTRRVVQFLLRDA 633 (662)
Q Consensus 609 ~~Cl~~dP~~RPt~~eVl~~L~~~~ 633 (662)
.+||+.+|++||++.||+++|+...
T Consensus 310 ~~cl~~~p~~RPs~~ell~~l~~~~ 334 (337)
T cd05054 310 LDCWHNNPEDRPTFSELVEILGDLL 334 (337)
T ss_pred HHHccCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999999998653
No 118
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.1e-36 Score=309.82 Aligned_cols=261 Identities=26% Similarity=0.435 Sum_probs=211.6
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|++|.||+|....+|..||+|.++.. .....+.+.+|++++++++|+|++++++++...+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 5788899999999999999999888999999988642 2334568899999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++++|.+++..... ....+++.+++.++.++++||.|||+ .+++||||+|+||+++.++.++|+|||+++...
T Consensus 82 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 82 ELADAGDLSRMIKHFKK-QKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred ecCCCCCHHHHHHHhcc-cCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence 99999999999864321 13558999999999999999999999 899999999999999999999999999988654
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
.... ......++..|+|||.+.+..++.++|||||||++|||++|+.||...... +.+.... ...+. .+
T Consensus 158 ~~~~-~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~-~~~~~-----~~ 226 (267)
T cd08224 158 SKTT-AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN----LYSLCKK-IEKCD-----YP 226 (267)
T ss_pred CCCc-ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCcc----HHHHHhh-hhcCC-----CC
Confidence 4322 223346888999999998888999999999999999999999998644321 1111111 11111 01
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
.. ........+.+++.+||+.+|++||++.+|++.|...
T Consensus 227 ~~--~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 227 PL--PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred CC--ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 11 1124456788999999999999999999999999764
No 119
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6.6e-37 Score=329.71 Aligned_cols=264 Identities=22% Similarity=0.244 Sum_probs=207.4
Q ss_pred cchHHHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeE
Q 040242 345 FRYSELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWC 421 (662)
Q Consensus 345 ~~~~el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~ 421 (662)
-.+.++....++|+..+.||+|+||.||++....+++.+|+|++.... ....+.+.+|+.+++.++||||+++++++
T Consensus 33 ~~~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~ 112 (371)
T cd05622 33 NKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF 112 (371)
T ss_pred hHHhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 345566667789999999999999999999999999999999986532 23345678899999999999999999999
Q ss_pred eccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEE
Q 040242 422 RKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKL 501 (662)
Q Consensus 422 ~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL 501 (662)
...+..++||||+++|+|.+++.. ..++...+..++.||+.||.|||+ .+|+||||||+|||++.++.+||
T Consensus 113 ~~~~~~~lv~Ey~~gg~L~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ikL 183 (371)
T cd05622 113 QDDRYLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKL 183 (371)
T ss_pred EcCCEEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEEE
Confidence 999999999999999999999843 347788888999999999999999 89999999999999999999999
Q ss_pred eeccccccccCCCCCcceecccCCcccCcccccCC----CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHH
Q 040242 502 GDFGLARAYDHNINPQTTHIVGTLGYLAPELTRTG----KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVR 577 (662)
Q Consensus 502 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~ 577 (662)
+|||+++..............||+.|+|||++... .++.++|||||||++|||++|+.||........ ..
T Consensus 184 ~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~------~~ 257 (371)
T cd05622 184 ADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGT------YS 257 (371)
T ss_pred EeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHH------HH
Confidence 99999987654332233345799999999998653 378899999999999999999999986432211 11
Q ss_pred HHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHHH
Q 040242 578 ELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDF--RPSTRRVVQFL 629 (662)
Q Consensus 578 ~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~eVl~~L 629 (662)
.......... .. ........+..++.+|+..++.+ ||++.+++++.
T Consensus 258 ~i~~~~~~~~-----~~-~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 258 KIMNHKNSLT-----FP-DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred HHHcCCCccc-----CC-CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 1111100000 00 11133455778888999854443 78999999864
No 120
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-36 Score=317.72 Aligned_cols=251 Identities=25% Similarity=0.389 Sum_probs=207.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..+.||+|++|.||+|+...++..|++|.+........+.+.+|+.++++++|+||+++++++......++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 57888899999999999999998889999999997765555678899999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.. ..+++.++..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 100 ~~~~L~~~~~~------~~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~ 170 (296)
T cd06654 100 AGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (296)
T ss_pred CCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhccccc
Confidence 99999999842 347889999999999999999999 899999999999999999999999999988654322
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
. ......+++.|+|||.+.+..++.++|||||||++|||++|+.||......... ..+. ..+ .+.+
T Consensus 171 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~--~~~~----~~~------~~~~- 236 (296)
T cd06654 171 S-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL--YLIA----TNG------TPEL- 236 (296)
T ss_pred c-ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH--HHHh----cCC------CCCC-
Confidence 1 122346889999999998888899999999999999999999999754332111 1000 000 0111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
..+......+.+++.+||..+|++||++.+++++
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 1122344668889999999999999999999984
No 121
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=4.2e-37 Score=325.15 Aligned_cols=243 Identities=26% Similarity=0.373 Sum_probs=196.2
Q ss_pred ceeeeeCceEEEEEEeC---CCCcEEEEEEeeccc----hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 361 NLVGSGGFGKVYRGVIP---STGLEVAIKRVAHNS----RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~---~~g~~vavK~~~~~~----~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
++||+|+||.||+++.. ..++.||||.+.... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 67999999999999863 467899999997532 22345678899999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++.. ...+.+.....++.|+++||.|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 82 ~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 153 (323)
T cd05584 82 LSGGELFMHLER-----EGIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE 153 (323)
T ss_pred CCCchHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC
Confidence 999999998853 3457788888999999999999999 89999999999999999999999999998754322
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..... .+. .
T Consensus 154 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~------~~~~~-~~~------~-- 217 (323)
T cd05584 154 G-TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKT------IDKIL-KGK------L-- 217 (323)
T ss_pred C-CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHH------HHHHH-cCC------C--
Confidence 1 122335789999999999888899999999999999999999999976543211 11111 111 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRP-----STRRVVQF 628 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~eVl~~ 628 (662)
..+......+.+++.+||+.+|++|| ++.+++++
T Consensus 218 -~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 218 -NLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred -CCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 11222345678999999999999999 78888764
No 122
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-37 Score=309.43 Aligned_cols=279 Identities=25% Similarity=0.357 Sum_probs=216.2
Q ss_pred HhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEee--ccchhhHHHHHHHHHHhhccccccceeeeeeEec-----c
Q 040242 352 SATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVA--HNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRK-----Q 424 (662)
Q Consensus 352 ~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~--~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~-----~ 424 (662)
.....|...+.||+|.||.|+++.++.+|+.||||++. -......++.++|+++|+.++|+||+.+.+.... -
T Consensus 19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f 98 (359)
T KOG0660|consen 19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF 98 (359)
T ss_pred eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence 34456666789999999999999999999999999997 3455567888999999999999999999998755 3
Q ss_pred CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 425 DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 425 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
+..|+|+|+| ..+|...++.+ ..|+......++.|+++||.|+|+ .+|+||||||+|++++.+..+||+||
T Consensus 99 ~DvYiV~elM-etDL~~iik~~-----~~L~d~H~q~f~YQiLrgLKyiHS---AnViHRDLKPsNll~n~~c~lKI~DF 169 (359)
T KOG0660|consen 99 NDVYLVFELM-ETDLHQIIKSQ-----QDLTDDHAQYFLYQILRGLKYIHS---ANVIHRDLKPSNLLLNADCDLKICDF 169 (359)
T ss_pred ceeEEehhHH-hhHHHHHHHcC-----ccccHHHHHHHHHHHHHhcchhhc---ccccccccchhheeeccCCCEEeccc
Confidence 4789999999 77999999543 348889999999999999999999 89999999999999999999999999
Q ss_pred cccccccCC-CCCcceecccCCcccCccccc-CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHH---
Q 040242 505 GLARAYDHN-INPQTTHIVGTLGYLAPELTR-TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVREL--- 579 (662)
Q Consensus 505 Gla~~~~~~-~~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~--- 579 (662)
|||+..... .....+..+.|..|.|||.+. ...++.+.||||.|||+.||++|++-|.+.+...+..+..-+-..
T Consensus 170 GLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~ 249 (359)
T KOG0660|consen 170 GLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSE 249 (359)
T ss_pred cceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCH
Confidence 999987643 122346678899999999764 567999999999999999999999999877665554432221110
Q ss_pred -----hhcCccccccC--CCC-----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhcCCCCCCCC
Q 040242 580 -----HSQGQITRAID--PTL-----DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF--LLRDASLPQAP 639 (662)
Q Consensus 580 -----~~~~~~~~~id--~~l-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~--L~~~~~~p~~p 639 (662)
....+....+. |.. ...-+......++|..+||..||.+|+|++|.+++ |+.-..+.+-|
T Consensus 250 e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP 323 (359)
T KOG0660|consen 250 EDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP 323 (359)
T ss_pred HHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence 01000111110 111 01111334567888999999999999999999984 55554444444
No 123
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=3.2e-37 Score=325.81 Aligned_cols=243 Identities=26% Similarity=0.363 Sum_probs=197.0
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
++||+|+||.||+|+...+++.||||++.... ....+.+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999998889999999997642 33445677888888866 799999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|+|..++... ..+++..+..++.|+++||.|||+ .+|+||||||+||+++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~-~ 151 (321)
T cd05591 81 GDLMFQIQRS-----RKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG-V 151 (321)
T ss_pred CcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceecccCC-c
Confidence 9999888533 458899999999999999999999 899999999999999999999999999987543221 2
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYF 596 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 596 (662)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... +.. .... +. . . .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~---~~~---~i~~-~~---~---~---~ 215 (321)
T cd05591 152 TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDD---LFE---SILH-DD---V---L---Y 215 (321)
T ss_pred cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHH---HHH---HHHc-CC---C---C---C
Confidence 2234568999999999988889999999999999999999999998654321 111 1111 11 0 0 1
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCC-------CHHHHHHH
Q 040242 597 DPQEAELVLTLGLLCCDPHPDFRP-------STRRVVQF 628 (662)
Q Consensus 597 ~~~~~~~l~~l~~~Cl~~dP~~RP-------t~~eVl~~ 628 (662)
+......+.+++.+||+.||++|| ++.+++++
T Consensus 216 p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 216 PVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 112335677889999999999999 88888864
No 124
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-37 Score=312.70 Aligned_cols=265 Identities=24% Similarity=0.377 Sum_probs=204.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHh--hccccccceeeeeeEeccC----eee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSM--GRLRHRNLVQLHGWCRKQD----ELL 428 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l--~~l~H~niv~l~~~~~~~~----~~~ 428 (662)
++....+.||+|+||.||+|.+ .|+.||||++....+. .+.+|.++. ..|||+||+.+++.-..+. +++
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srdE~---SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRDER---SWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred heeEEEEEecCccccceeeccc--cCCceEEEEecccchh---hhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 5677789999999999999999 4788999999665443 444555555 4569999999999876554 789
Q ss_pred EEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhc-----CCCCEEeCCcCCCceEeCCCCCeEEee
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEE-----CDQRVVHRDVKPSNVLIDADLNPKLGD 503 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~-----~~~~ivH~Dlkp~NIll~~~~~~kL~D 503 (662)
||.+|.++|||.++|. +..++-...++++..+|.||++||.+ .++.|.|||||++|||+..++.+.|+|
T Consensus 286 LvTdYHe~GSL~DyL~------r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IAD 359 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLN------RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 359 (513)
T ss_pred EeeecccCCcHHHHHh------hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEee
Confidence 9999999999999994 45788999999999999999999975 357799999999999999999999999
Q ss_pred ccccccccCCCC---CcceecccCCcccCcccccCC------CCCcchhHHHHHHHHHHHHcC----------CCCCCcc
Q 040242 504 FGLARAYDHNIN---PQTTHIVGTLGYLAPELTRTG------KATTSTDVFGFGTLMLEVACG----------RRPIEPQ 564 (662)
Q Consensus 504 fGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~------~~t~ksDV~S~Gvvl~elltG----------~~p~~~~ 564 (662)
+|||-......+ ......+||.+|||||++... +.-..+||||||.|+||+... +.||.+-
T Consensus 360 LGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~ 439 (513)
T KOG2052|consen 360 LGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDV 439 (513)
T ss_pred ceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccC
Confidence 999988765532 234456899999999998543 223468999999999999762 2355432
Q ss_pred cchhhHHHHHHHHHHhhcCccccccCCCC--CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCCC
Q 040242 565 RTAMELVLVDWVRELHSQGQITRAIDPTL--DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDASLP 636 (662)
Q Consensus 565 ~~~~~~~l~~~~~~~~~~~~~~~~id~~l--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~~p 636 (662)
.+.+... +-+++ ---.+.+.|.+ ...+.+....+.+|++.||..+|..|-|+-.|-+.|.+....+
T Consensus 440 Vp~DPs~--eeMrk----VVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~~~ 507 (513)
T KOG2052|consen 440 VPSDPSF--EEMRK----VVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSNSD 507 (513)
T ss_pred CCCCCCH--HHHhc----ceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhcCh
Confidence 2211111 01111 11223344444 2345577888999999999999999999999999998776543
No 125
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=5.4e-37 Score=323.29 Aligned_cols=242 Identities=24% Similarity=0.358 Sum_probs=195.0
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
+.||+|+||+||+|....+++.||||++.... ....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999998889999999997642 23345567788888764 899999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|+|.+++.. ...+++.+...++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 g~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~ 151 (316)
T cd05619 81 GDLMFHIQS-----CHKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG-DA 151 (316)
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC-CC
Confidence 999999853 2458899999999999999999999 89999999999999999999999999998753222 12
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYF 596 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 596 (662)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... +...+. .. .+..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~~~~i~----~~------~~~~--- 215 (316)
T cd05619 152 KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE---LFQSIR----MD------NPCY--- 215 (316)
T ss_pred ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHH---HHHHHH----hC------CCCC---
Confidence 2334578999999999988889999999999999999999999997653221 111111 00 1111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHH-HHHH
Q 040242 597 DPQEAELVLTLGLLCCDPHPDFRPSTR-RVVQ 627 (662)
Q Consensus 597 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~-eVl~ 627 (662)
+......+.+++.+||+.||++||++. ++.+
T Consensus 216 ~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 216 PRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred CccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 112345577889999999999999997 6654
No 126
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=8.1e-37 Score=317.71 Aligned_cols=259 Identities=24% Similarity=0.388 Sum_probs=204.5
Q ss_pred CCcccceeeeeCceEEEEEEeCC-----CCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPS-----TGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~-----~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
+|+..+.||+|+||.||+|+... ....+++|.+.... .....++.+|+.+++.++||||+++++.|...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 36778899999999999998742 23568899886543 3345678999999999999999999999999999999
Q ss_pred EEeccCCCCcchhcccccc-------------------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCc
Q 040242 430 VYDYVPNGSLDKLLFDNDQ-------------------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSN 490 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~-------------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N 490 (662)
++||+++++|.+++..... .....+++.+++.++.|++.||.|||+ .+++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhhe
Confidence 9999999999999864211 112458899999999999999999998 899999999999
Q ss_pred eEeCCCCCeEEeeccccccccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchh
Q 040242 491 VLIDADLNPKLGDFGLARAYDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAM 568 (662)
Q Consensus 491 Ill~~~~~~kL~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~ 568 (662)
|++++++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||++++||++ |+.||......
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~- 236 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE- 236 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH-
Confidence 99999999999999999865332211 1222345678999999988889999999999999999998 99998654322
Q ss_pred hHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 569 ELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 569 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
.+.+++ ..+. ... .+......+..++.+|++.+|.+||++.++++.|++.
T Consensus 237 --~~~~~~----~~~~-----~~~---~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 237 --RLFNLL----KTGY-----RME---RPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred --HHHHHH----hCCC-----CCC---CCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 111111 1110 011 1122345688999999999999999999999999764
No 127
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.3e-36 Score=308.71 Aligned_cols=247 Identities=25% Similarity=0.425 Sum_probs=199.7
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCc
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL 439 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 439 (662)
++||+|+||.||+|... ++..+|+|.+.... ......+.+|+.++++++||||++++++|...+..++||||+++++|
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 79 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF 79 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence 46999999999999974 67889999987653 33345789999999999999999999999999999999999999999
Q ss_pred chhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcce
Q 040242 440 DKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQTT 519 (662)
Q Consensus 440 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~~ 519 (662)
.+++... ...+++..++.++.|++.+|.|||+ .+++||||||+||+++.++.+||+|||++............
T Consensus 80 ~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (250)
T cd05085 80 LSFLRKK----KDELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSG 152 (250)
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccccccCC
Confidence 9998543 3458899999999999999999998 89999999999999999999999999999765433222222
Q ss_pred ecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCH
Q 040242 520 HIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDP 598 (662)
Q Consensus 520 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~ 598 (662)
...++..|+|||++.++.++.++||||||+++|||++ |..||....... ....+ ..+. .. ....
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~---~~~~~----~~~~-----~~---~~~~ 217 (250)
T cd05085 153 LKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQ---AREQV----EKGY-----RM---SCPQ 217 (250)
T ss_pred CCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHH---HHHHH----HcCC-----CC---CCCC
Confidence 2344678999999998889999999999999999998 999987543221 11111 1111 00 1122
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 599 QEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 599 ~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
.....+.+++.+|++.+|++||++.|+++.|.
T Consensus 218 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 218 KCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 34567889999999999999999999999885
No 128
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1e-36 Score=312.28 Aligned_cols=253 Identities=28% Similarity=0.428 Sum_probs=203.4
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..++||+|++|.||+|.+..+ ..||+|++.... ...++|.+|+.++++++|+||+++++.+.. ...++||||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 5688899999999999999998654 569999987532 234678999999999999999999998754 5689999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++|+|.+++.... ...+++..+..++.|+++||.|||+ .+++||||||+||++++++.+||+|||+++......
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~ 156 (262)
T cd05071 83 SKGSLLDFLKGEM---GKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 156 (262)
T ss_pred CCCcHHHHHhhcc---ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeeccccc
Confidence 9999999996432 3468999999999999999999999 899999999999999999999999999998765443
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
........++..|+|||+..+..++.++|||||||++|||++ |+.||........ . .. ...+. .
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~---~---~~-~~~~~-----~--- 221 (262)
T cd05071 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV---L---DQ-VERGY-----R--- 221 (262)
T ss_pred cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH---H---HH-HhcCC-----C---
Confidence 222223456778999999988889999999999999999999 7888865432211 0 11 11110 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
..........+.+++.+|++.+|++||++.+++++|+.
T Consensus 222 ~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~ 259 (262)
T cd05071 222 MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLED 259 (262)
T ss_pred CCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 11123455678899999999999999999999999875
No 129
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.3e-37 Score=325.09 Aligned_cols=238 Identities=27% Similarity=0.357 Sum_probs=191.0
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHH-HhhccccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEIT-SMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~-~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
+.||+|+||+||+|....+|+.||+|++.... ....+++..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999999899999999997542 223345555554 56789999999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|+|..++.. ...+++.....++.||++||.|||+ .+|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 81 g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~ 151 (323)
T cd05575 81 GELFFHLQR-----ERSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SK 151 (323)
T ss_pred CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CC
Confidence 999998853 3458889999999999999999999 89999999999999999999999999998753222 12
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYF 596 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 596 (662)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....... + .+ ..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~------~~~~i~~-~--------~~-~~ 215 (323)
T cd05575 152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE------MYDNILN-K--------PL-RL 215 (323)
T ss_pred ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHH------HHHHHHc-C--------CC-CC
Confidence 2334578999999999998889999999999999999999999997543211 1111111 0 01 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHH
Q 040242 597 DPQEAELVLTLGLLCCDPHPDFRPSTR 623 (662)
Q Consensus 597 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 623 (662)
.......+.+++.+||+.||.+||+++
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 216 KPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 122355678899999999999999984
No 130
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5e-37 Score=323.61 Aligned_cols=241 Identities=22% Similarity=0.328 Sum_probs=193.7
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
++||+|+||.||+|+...+|..||+|.+.... ....+.+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999999899999999997642 23345567788777754 899999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|+|..++.. ...+++.+...++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 g~L~~~i~~-----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~ 151 (316)
T cd05620 81 GDLMFHIQD-----KGRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG-DN 151 (316)
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeecccC-CC
Confidence 999998853 2457889999999999999999999 89999999999999999999999999998743221 12
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYF 596 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 596 (662)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+.+.+ ... .+.+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~---~~~~~~----~~~------~~~~--- 215 (316)
T cd05620 152 RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDED---ELFESI----RVD------TPHY--- 215 (316)
T ss_pred ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH---HHHHHH----HhC------CCCC---
Confidence 233457899999999999889999999999999999999999999754322 111111 100 1111
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHH-HHH
Q 040242 597 DPQEAELVLTLGLLCCDPHPDFRPSTR-RVV 626 (662)
Q Consensus 597 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~-eVl 626 (662)
+......+.+++.+||+.||++||++. ++.
T Consensus 216 ~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 216 PRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 112345577899999999999999984 665
No 131
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.9e-36 Score=311.44 Aligned_cols=256 Identities=24% Similarity=0.369 Sum_probs=201.1
Q ss_pred cccceeeeeCceEEEEEEeCCCCc--EEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEecc------Cee
Q 040242 358 REKNLVGSGGFGKVYRGVIPSTGL--EVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ------DEL 427 (662)
Q Consensus 358 ~~~~~LG~G~~g~Vy~~~~~~~g~--~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~------~~~ 427 (662)
...++||+|+||.||+|++...+. .+|+|.+... .....+.+..|+.++++++|+||++++++|... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456889999999999999876664 6899988654 344567889999999999999999999988532 246
Q ss_pred eEEEeccCCCCcchhcccccc-cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccc
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQ-QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGL 506 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGl 506 (662)
+++|||+++|+|.+++..... .+...+++.....++.|++.||+|||+ .+|+||||||+||++++++.+||+|||+
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCCc
Confidence 899999999999998743321 123568999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCc
Q 040242 507 ARAYDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQ 584 (662)
Q Consensus 507 a~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~ 584 (662)
++........ ......+++.|+|||...+..++.++|||||||++|||++ |+.||...... .+.+ ....+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~---~~~~----~~~~~~ 231 (272)
T cd05075 159 SKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS---EIYD----YLRQGN 231 (272)
T ss_pred ccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHH----HHHcCC
Confidence 9876543211 1122345778999999998889999999999999999999 78888654321 1111 111111
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 585 ITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 585 ~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
.. .........+.+++.+||+.+|++||++.++++.|+.
T Consensus 232 ~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 232 RL--------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred CC--------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 11 1112334568899999999999999999999999876
No 132
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.1e-36 Score=314.11 Aligned_cols=259 Identities=25% Similarity=0.401 Sum_probs=207.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCCC-----CcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPST-----GLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELL 428 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~-----g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 428 (662)
++|...+.||+|+||.||+|..... +..||+|.+.... ......+.+|+.++..++|+||+++++++......+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~ 85 (277)
T cd05032 6 EKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTL 85 (277)
T ss_pred HHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcE
Confidence 5678889999999999999998543 3789999986553 344567889999999999999999999999999999
Q ss_pred EEEeccCCCCcchhccccccc-----ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEee
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQ-----KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGD 503 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~-----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 503 (662)
+||||+++++|.+++...... ....++|..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|
T Consensus 86 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 86 VVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred EEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEECC
Confidence 999999999999999654321 12357899999999999999999998 8999999999999999999999999
Q ss_pred ccccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhh
Q 040242 504 FGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHS 581 (662)
Q Consensus 504 fGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~ 581 (662)
||+++....... .......++..|+|||.+.++.++.++|||||||++|||++ |+.||....... +..++.
T Consensus 163 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~---~~~~~~---- 235 (277)
T cd05032 163 FGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEE---VLKFVI---- 235 (277)
T ss_pred cccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHH---HHHHHh----
Confidence 999986543321 12223456789999999988889999999999999999998 888987543221 111111
Q ss_pred cCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 582 QGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 582 ~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
.+. ....+......+.+++.+||+.+|++|||+.++++.|+.
T Consensus 236 ~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 236 DGG--------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred cCC--------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 111 111122235678899999999999999999999998863
No 133
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-37 Score=329.36 Aligned_cols=244 Identities=24% Similarity=0.357 Sum_probs=205.4
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeee
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELL 428 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~ 428 (662)
.-++|...++||+|.||+|+++..+.+++.+|||.+++. .....+....|.+++... +||.|++++.++..+++++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 346799999999999999999999999999999999886 345566777888887777 5999999999999999999
Q ss_pred EEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccc
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLAR 508 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~ 508 (662)
+||||+.||++..+.+ ...++.....-++..|+.||+|||+ ++||+||||.+|||||.+|.+||+||||++
T Consensus 446 fvmey~~Ggdm~~~~~------~~~F~e~rarfyaAev~l~L~fLH~---~~IIYRDlKLdNiLLD~eGh~kiADFGlcK 516 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIH------TDVFSEPRARFYAAEVVLGLQFLHE---NGIIYRDLKLDNLLLDTEGHVKIADFGLCK 516 (694)
T ss_pred EEEEecCCCcEEEEEe------cccccHHHHHHHHHHHHHHHHHHHh---cCceeeecchhheEEcccCcEEeccccccc
Confidence 9999999999655553 3568888889999999999999999 999999999999999999999999999998
Q ss_pred cccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccc
Q 040242 509 AYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRA 588 (662)
Q Consensus 509 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 588 (662)
---. ....+...+||+.|||||++.+..|+...|.|+|||+||||+.|..||.+.++++... -+. .
T Consensus 517 e~m~-~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~Fd---sI~----------~ 582 (694)
T KOG0694|consen 517 EGMG-QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFD---SIV----------N 582 (694)
T ss_pred ccCC-CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH---HHh----------c
Confidence 5322 2335667899999999999999999999999999999999999999999765542211 000 0
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 040242 589 IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPST 622 (662)
Q Consensus 589 id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 622 (662)
.|+ .|+.....+.+.|+++++..+|++|--+
T Consensus 583 d~~---~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 583 DEV---RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CCC---CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 111 2444566777888899999999999876
No 134
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=8.3e-37 Score=314.07 Aligned_cols=255 Identities=26% Similarity=0.398 Sum_probs=203.0
Q ss_pred HhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcc-ccccceeeeeeEecc------
Q 040242 352 SATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQ------ 424 (662)
Q Consensus 352 ~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~------ 424 (662)
.+++.|+..+.||+|+||.||+|....+++.||+|++.... .....+..|+.++.++ +|+||+++++++...
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 46678888999999999999999998899999999986543 3345788999999998 799999999998653
Q ss_pred CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 425 DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 425 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
...++||||+++++|.+++.... ...+++..+..++.|++.||+|||+ .+++|+||||+||++++++.+||+||
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTK---GNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCEEEccC
Confidence 45899999999999999986532 3468999999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCCCcceecccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHH
Q 040242 505 GLARAYDHNINPQTTHIVGTLGYLAPELTR-----TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVREL 579 (662)
Q Consensus 505 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~ 579 (662)
|++....... .......|+..|+|||++. ...++.++|||||||++|||++|+.||.......... .
T Consensus 156 g~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~-----~-- 227 (272)
T cd06637 156 GVSAQLDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALF-----L-- 227 (272)
T ss_pred CCceeccccc-ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHH-----H--
Confidence 9998654322 2223356899999999885 3357889999999999999999999996543221111 0
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 580 HSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 580 ~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.... ..+.+ ........+.+++.+||..+|.+||++.+++++
T Consensus 228 ~~~~-----~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 228 IPRN-----PAPRL--KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred HhcC-----CCCCC--CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 0000 01111 111234567899999999999999999999863
No 135
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6.3e-37 Score=323.82 Aligned_cols=247 Identities=23% Similarity=0.328 Sum_probs=198.9
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEEE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV~ 431 (662)
+|+..+.||+|+||.||+|+...++..||||.+.... ....+.+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4778899999999999999998889999999997642 22344567788888777 5899999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++|+|.+++.. ...+++.++..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~~g~L~~~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~ 152 (323)
T cd05616 81 EYVNGGDLMYQIQQ-----VGRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENM 152 (323)
T ss_pred cCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceecC
Confidence 99999999988843 2458899999999999999999999 899999999999999999999999999997543
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+...+. ...
T Consensus 153 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~---~~~~~i~----~~~------- 217 (323)
T cd05616 153 WDG-VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED---ELFQSIM----EHN------- 217 (323)
T ss_pred CCC-CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH---HHHHHHH----hCC-------
Confidence 221 1223457899999999999989999999999999999999999999765322 1111111 111
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPST-----RRVVQ 627 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~eVl~ 627 (662)
..++......+..++.+|++.+|.+|++. .++.+
T Consensus 218 --~~~p~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~ 256 (323)
T cd05616 218 --VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 256 (323)
T ss_pred --CCCCCcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhc
Confidence 01122344567889999999999999984 66654
No 136
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.9e-36 Score=311.15 Aligned_cols=258 Identities=22% Similarity=0.392 Sum_probs=204.2
Q ss_pred CcccceeeeeCceEEEEEEeCCC---CcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCe-----
Q 040242 357 FREKNLVGSGGFGKVYRGVIPST---GLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDE----- 426 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~---g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~----- 426 (662)
|+..+.||+|+||.||+|....+ +..||+|++... ......++.+|+..++.++|+||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 45678999999999999998543 378999998754 23445689999999999999999999999876554
Q ss_pred -eeEEEeccCCCCcchhccccccc-ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 427 -LLLVYDYVPNGSLDKLLFDNDQQ-KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 427 -~~lV~E~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
.++++||+++|+|..++...... ....+++.....++.|++.||.|||+ .+++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECCc
Confidence 79999999999999998654221 23468999999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhc
Q 040242 505 GLARAYDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQ 582 (662)
Q Consensus 505 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~ 582 (662)
|+++........ ......++..|+|||.+....++.++|||||||++|||++ |..||...... .+.+++..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~---~~~~~~~~---- 230 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH---EIYDYLRH---- 230 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHHc----
Confidence 999866433221 1122335678999999988889999999999999999999 88888654322 11222211
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 583 GQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 583 ~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
+. ....+......+.+++.+||+.||++||++.||++.|+..
T Consensus 231 ~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 231 GN--------RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CC--------CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 1111223456788999999999999999999999998753
No 137
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.3e-38 Score=327.27 Aligned_cols=252 Identities=23% Similarity=0.388 Sum_probs=214.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCe-eeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDE-LLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~-~~lV~ 431 (662)
++|...+++|+|+||.++....+.++..+++|.+... .....+...+|+.++++++|||||.+.+.+.+++. ++|||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 4677889999999999999999889999999988654 33344567899999999999999999999999988 99999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
+||+||+|.+.|...+ ...++.+.+++++.|++.|+.|||+ ..|+|||||+.||+++.+..+||+|||+++.+.
T Consensus 84 ~Y~eGg~l~~~i~~~k---~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~ 157 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK---GVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKILN 157 (426)
T ss_pred eecCCCCHHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhhcC
Confidence 9999999999997653 4678899999999999999999998 899999999999999999999999999999987
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
... .....+.||+.|+.||.+.+.+|..|+|||||||++|||++-+++|...+.. .|+. + +.+..
T Consensus 158 ~~~-~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~---~Li~---k------i~~~~-- 222 (426)
T KOG0589|consen 158 PED-SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS---ELIL---K------INRGL-- 222 (426)
T ss_pred Cch-hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH---HHHH---H------Hhhcc--
Confidence 654 2334578999999999999999999999999999999999999999876432 1111 1 11111
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
....+..+...+..++..|++.+|+.||++.+++.+
T Consensus 223 -~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 -YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 123345566778889999999999999999999974
No 138
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.1e-36 Score=317.96 Aligned_cols=258 Identities=28% Similarity=0.434 Sum_probs=203.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCc--EEEEEEeecc-chhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGL--EVAIKRVAHN-SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~--~vavK~~~~~-~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV 430 (662)
++|+..+.||+|+||.||+|....++. .+++|.+... .....+.|..|+.++.++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 468889999999999999999876654 4788888643 334456789999999999 799999999999999999999
Q ss_pred EeccCCCCcchhccccccc-----------ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCe
Q 040242 431 YDYVPNGSLDKLLFDNDQQ-----------KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNP 499 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 499 (662)
+||+++++|.+++...... ....+++..++.++.|++.||+|||+ .+++||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeE
Confidence 9999999999999643210 12358899999999999999999999 899999999999999999999
Q ss_pred EEeeccccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHH
Q 040242 500 KLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRE 578 (662)
Q Consensus 500 kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~ 578 (662)
||+|||++....... .......+..|+|||+.....++.++|||||||++|||++ |+.||....... ....
T Consensus 159 kl~dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~------~~~~ 230 (297)
T cd05089 159 KIADFGLSRGEEVYV--KKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE------LYEK 230 (297)
T ss_pred EECCcCCCcccccee--ccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH------HHHH
Confidence 999999987432211 1111223567999999988889999999999999999997 999997543221 1111
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 579 LHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 579 ~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
. ..+ ..+ ..+......+.+|+.+||+.+|.+||++.++++.|+..
T Consensus 231 ~-~~~-----~~~---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 275 (297)
T cd05089 231 L-PQG-----YRM---EKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM 275 (297)
T ss_pred H-hcC-----CCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1 111 111 11222345688999999999999999999999987644
No 139
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.5e-36 Score=318.74 Aligned_cols=265 Identities=25% Similarity=0.347 Sum_probs=201.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
++|...+.||+|+||+||+|....++..||+|++.... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56888999999999999999998889999999987543 22344678899999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++ +|.+++... ...+++..+..++.|+++||.|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~~-~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 86 LDK-DLKQYMDDC----GNIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred CCC-CHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 964 888877543 3457889999999999999999999 89999999999999999999999999999865432
Q ss_pred CCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHH--------HHHhhcC-
Q 040242 514 INPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWV--------RELHSQG- 583 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~--------~~~~~~~- 583 (662)
.. ......+++.|+|||.+.+ ..++.++|||||||++|||++|+.||......+........ |......
T Consensus 158 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 158 TK-TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND 236 (309)
T ss_pred cc-ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchh
Confidence 21 1223467899999998764 46789999999999999999999999765433222111110 0000000
Q ss_pred ccccccCCCC-----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 584 QITRAIDPTL-----DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 584 ~~~~~id~~l-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.....-.+.. ..........+.+++.+||+.||.+|||+.|++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 0000000000 00111234567889999999999999999999973
No 140
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.1e-36 Score=311.18 Aligned_cols=253 Identities=26% Similarity=0.420 Sum_probs=204.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..++||+|+||.||+|... +++.||+|.+..... ...++.+|+.++++++|+|++++++++. .+..+++|||+
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred HHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 56788899999999999999974 578899999875433 3467899999999999999999999874 45789999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.... ...+++.+++.++.|++.||+|||+ .+++||||||+||+++.++.++|+|||++.......
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05067 83 ENGSLVDFLKTPE---GIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCC
Confidence 9999999986543 3468999999999999999999998 899999999999999999999999999998765332
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
........++..|+|||++....++.++||||||+++|||++ |+.||....... ....+ ..+. ...
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~----~~~~-----~~~- 223 (260)
T cd05067 157 YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE---VIQNL----ERGY-----RMP- 223 (260)
T ss_pred cccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH---HHHHH----HcCC-----CCC-
Confidence 222223346778999999988889999999999999999999 999997543221 11111 1110 011
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
........+.+++.+|++.+|++||+++++++.|+.
T Consensus 224 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 224 --RPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred --CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 112234568899999999999999999999999864
No 141
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1e-36 Score=315.54 Aligned_cols=258 Identities=25% Similarity=0.370 Sum_probs=204.3
Q ss_pred CCcccceeeeeCceEEEEEEeCC-----CCcEEEEEEeeccch-hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPS-----TGLEVAIKRVAHNSR-QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~-----~g~~vavK~~~~~~~-~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
+|+..+.||+|+||.||+|.... .+..||+|++..... ...+.+..|+.++++++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 35667889999999999998743 247899999976543 334678899999999999999999999999999999
Q ss_pred EEeccCCCCcchhcccccc-----------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCC
Q 040242 430 VYDYVPNGSLDKLLFDNDQ-----------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLN 498 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 498 (662)
++||+++++|.+++..... .....+++..++.++.|+++||.|||+ .+++||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCc
Confidence 9999999999999853210 112458899999999999999999999 89999999999999999999
Q ss_pred eEEeeccccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHH
Q 040242 499 PKLGDFGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWV 576 (662)
Q Consensus 499 ~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~ 576 (662)
+||+|||+++....... .......+++.|+|||.+.++.++.++|||||||++|||++ |..|+...... .+.+.+
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~~~~i 239 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ---DVIEMI 239 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHH
Confidence 99999999886543221 11223345789999999988889999999999999999998 88888654321 111111
Q ss_pred HHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 577 RELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 577 ~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
..+ .....+......+..++..|++.+|.+||++.+|++.|+.
T Consensus 240 ----~~~--------~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 240 ----RNR--------QVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred ----HcC--------CcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111 1112233455668899999999999999999999999864
No 142
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=7e-37 Score=322.75 Aligned_cols=243 Identities=22% Similarity=0.339 Sum_probs=197.7
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
+.||+|+||+||++....++..||||++.... ......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999998889999999997642 23445677888888887 799999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|+|..++... ..+++.+...++.|++.||.|||+ .+++||||||+||++++++.+||+|||+++..... ..
T Consensus 81 ~~L~~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~ 151 (318)
T cd05570 81 GDLMFHIQRS-----GRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG-GV 151 (318)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCcC-CC
Confidence 9999888432 358999999999999999999999 89999999999999999999999999998753222 11
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYF 596 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 596 (662)
......|++.|+|||++.+..++.++|||||||++|||++|+.||....... +. ... .... . .+
T Consensus 152 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~---~~---~~i-~~~~------~---~~ 215 (318)
T cd05570 152 TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDE---LF---QSI-LEDE------V---RY 215 (318)
T ss_pred cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHH---HH---HHH-HcCC------C---CC
Confidence 2233568999999999998899999999999999999999999997543211 11 111 1110 1 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCH-----HHHHHH
Q 040242 597 DPQEAELVLTLGLLCCDPHPDFRPST-----RRVVQF 628 (662)
Q Consensus 597 ~~~~~~~l~~l~~~Cl~~dP~~RPt~-----~eVl~~ 628 (662)
+......+.+++.+||+.||.+||++ .+++++
T Consensus 216 ~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 216 PRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred CCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 22234567899999999999999999 888764
No 143
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.9e-36 Score=315.59 Aligned_cols=266 Identities=23% Similarity=0.354 Sum_probs=208.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCC----------------cEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTG----------------LEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQL 417 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g----------------~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l 417 (662)
++|+..+.||+|+||.||++.....+ ..||+|.+.... ....+++.+|+.++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~ 84 (296)
T cd05051 5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARL 84 (296)
T ss_pred hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 57888999999999999999875433 458999987653 3456788999999999999999999
Q ss_pred eeeEeccCeeeEEEeccCCCCcchhcccccccc------cccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCce
Q 040242 418 HGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQK------KKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNV 491 (662)
Q Consensus 418 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~------~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NI 491 (662)
++++..++..+++|||+++++|.+++....... ...+++..++.++.|+++||.|||+ .+++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~Ni 161 (296)
T cd05051 85 LGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhce
Confidence 999999999999999999999999996543111 2368999999999999999999999 8999999999999
Q ss_pred EeCCCCCeEEeeccccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc--CCCCCCcccchh
Q 040242 492 LIDADLNPKLGDFGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC--GRRPIEPQRTAM 568 (662)
Q Consensus 492 ll~~~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt--G~~p~~~~~~~~ 568 (662)
+++.++.++|+|||+++....... .......++..|+|||++..+.++.++|||||||++|||++ |..|+......
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~- 240 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQ- 240 (296)
T ss_pred eecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChH-
Confidence 999999999999999986543221 12233456789999999988889999999999999999998 66777543221
Q ss_pred hHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 569 ELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 569 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
.....+...+........ ...+...+..+.+++.+|++.||.+||++.||++.|++
T Consensus 241 --~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 241 --QVIENAGHFFRDDGRQIY-----LPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred --HHHHHHHhcccccccccc-----CCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 122222222211111111 11122334678999999999999999999999999863
No 144
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.1e-36 Score=315.33 Aligned_cols=265 Identities=26% Similarity=0.385 Sum_probs=202.3
Q ss_pred cccceeeeeCceEEEEEEe----CCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEecc--CeeeEE
Q 040242 358 REKNLVGSGGFGKVYRGVI----PSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ--DELLLV 430 (662)
Q Consensus 358 ~~~~~LG~G~~g~Vy~~~~----~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~lV 430 (662)
+..+.||+|+||+||++.. ..++..||+|.+.... ......|.+|+.++++++||||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 7789999999999987653 3467889999987643 33456788999999999999999999988654 358999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
|||+++++|.+++.. ..+++.+++.++.|++.||.|||+ .+++||||||+||++++++.+||+|||+++..
T Consensus 87 ~e~~~~~~l~~~~~~------~~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 87 MEYVPLGSLRDYLPK------HKLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred ecCCCCCCHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEeeccccccc
Confidence 999999999999843 348999999999999999999999 89999999999999999999999999999876
Q ss_pred cCCCCC--cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccc
Q 040242 511 DHNINP--QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRA 588 (662)
Q Consensus 511 ~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 588 (662)
...... ......++..|+|||.+.....+.++||||||+++|||++|+.|+........ ....+.........+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 236 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFE-EMIGPKQGQMTVVRLIEL 236 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhh-hhhcccccccchhhhhhh
Confidence 543221 11122456779999999888899999999999999999999999864332111 000000000000111111
Q ss_pred cCCCC-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 589 IDPTL-DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 589 id~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
++... ...+...+..+.+++.+||+.+|++||++++|+++|+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 11111 112334456788999999999999999999999998753
No 145
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=8.8e-37 Score=329.64 Aligned_cols=252 Identities=25% Similarity=0.328 Sum_probs=197.4
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
+|+..+.||+|+||.||+++...+++.||||++.... ......+.+|+.++++++|+||+++++.+..++.+++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6888999999999999999999899999999986542 2334568899999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|+++|+|.+++... ..++......++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..+..
T Consensus 82 ~~~~g~L~~~i~~~-----~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 82 YIPGGDMMSLLIRL-----GIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred CCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 99999999998543 457888888999999999999999 8999999999999999999999999999753310
Q ss_pred CC------------------------------------------CCcceecccCCcccCcccccCCCCCcchhHHHHHHH
Q 040242 513 NI------------------------------------------NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTL 550 (662)
Q Consensus 513 ~~------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvv 550 (662)
.. ........||+.|+|||++.+..++.++|||||||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 00 000113469999999999998889999999999999
Q ss_pred HHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCC---CHHHHHH
Q 040242 551 MLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRP---STRRVVQ 627 (662)
Q Consensus 551 l~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP---t~~eVl~ 627 (662)
+|||++|+.||.......... ..... . .....+.... ....+.+++.+|+ .+|.+|+ ++.++++
T Consensus 234 lyell~G~~Pf~~~~~~~~~~------~i~~~-~-~~~~~~~~~~----~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 234 LYEMLVGQPPFLADTPAETQL------KVINW-E-TTLHIPSQAK----LSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred eeehhhCCCCCCCCCHHHHHH------HHhcc-C-ccccCCCCCC----CCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 999999999998654322111 10000 0 0000111111 2334455566665 4999999 8999997
Q ss_pred H
Q 040242 628 F 628 (662)
Q Consensus 628 ~ 628 (662)
+
T Consensus 301 h 301 (376)
T cd05598 301 H 301 (376)
T ss_pred C
Confidence 5
No 146
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.2e-37 Score=318.80 Aligned_cols=262 Identities=25% Similarity=0.376 Sum_probs=208.1
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCC-----CcEEEEEEeecc-chhhHHHHHHHHHHhhcc-ccccceeeeeeEeccC
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPST-----GLEVAIKRVAHN-SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQD 425 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~-----g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~ 425 (662)
..++|+..+.||+|++|.||++..... ...+|+|.+... ..+...++.+|+.++.++ +|+||+++++++..++
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 346688889999999999999987533 367999998754 334456788999999999 8999999999999999
Q ss_pred eeeEEEeccCCCCcchhcccccc-----------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeC
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQ-----------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLID 494 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 494 (662)
..+++|||+++|+|.+++..... .....+++..++.++.|++.||.|||+ .+|+||||||+||+++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~~ 166 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLVT 166 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEEc
Confidence 99999999999999999864310 123568999999999999999999998 8999999999999999
Q ss_pred CCCCeEEeeccccccccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHH
Q 040242 495 ADLNPKLGDFGLARAYDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVL 572 (662)
Q Consensus 495 ~~~~~kL~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l 572 (662)
.++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..|+........
T Consensus 167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~--- 243 (293)
T cd05053 167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEEL--- 243 (293)
T ss_pred CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHH---
Confidence 9999999999999876543211 1122335678999999988889999999999999999998 8888875432211
Q ss_pred HHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 573 VDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 573 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
.. ....+. ....+......+.+|+.+|++.+|.+|||+.|+++.|+..
T Consensus 244 ~~----~~~~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 244 FK----LLKEGY--------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred HH----HHHcCC--------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 11 111111 0112223456788999999999999999999999998764
No 147
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=3.2e-36 Score=314.08 Aligned_cols=266 Identities=24% Similarity=0.373 Sum_probs=204.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCC--------------CcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPST--------------GLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHG 419 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~--------------g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~ 419 (662)
++|+..+.||+|+||.||++..... ...||+|.+... .......|.+|++++++++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 5788889999999999999987432 235899998764 3344567999999999999999999999
Q ss_pred eEeccCeeeEEEeccCCCCcchhccccccc-------ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceE
Q 040242 420 WCRKQDELLLVYDYVPNGSLDKLLFDNDQQ-------KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVL 492 (662)
Q Consensus 420 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~-------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl 492 (662)
++...+..++||||+++++|.+++...... ....+++..++.++.|++.||+|||+ .+++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhEE
Confidence 999999999999999999999998543210 11347899999999999999999999 89999999999999
Q ss_pred eCCCCCeEEeeccccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc--CCCCCCcccchhh
Q 040242 493 IDADLNPKLGDFGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC--GRRPIEPQRTAME 569 (662)
Q Consensus 493 l~~~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt--G~~p~~~~~~~~~ 569 (662)
++.++.+||+|||++........ .......++..|+|||.+..+.++.++|||||||+++||++ |..||.......
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~- 240 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQ- 240 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHH-
Confidence 99999999999999976533221 11222345778999999988889999999999999999998 556766433211
Q ss_pred HHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 570 LVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 570 ~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
....+.+.+....... ....+...+..+.+|+.+|++.+|++||+|.+|++.|..
T Consensus 241 --~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 241 --VIENTGEFFRNQGRQI-----YLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred --HHHHHHHhhhhccccc-----cCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 1111111111110000 011122234679999999999999999999999999863
No 148
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=4.9e-36 Score=321.78 Aligned_cols=263 Identities=23% Similarity=0.279 Sum_probs=200.5
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccC-----
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD----- 425 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~----- 425 (662)
..++|+..+.||+|+||.||++....+|..||||++... .......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 347899999999999999999999888999999998653 3344567889999999999999999999986543
Q ss_pred -eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 426 -ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 426 -~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
..++||||+++ +|.+.+ ...+++..+..++.|+++||.|||+ .+|+||||||+||+++.++.+||+||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~-------~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~kl~Df 167 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVI-------HMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 167 (359)
T ss_pred ceeEEEEeCCCc-CHHHHH-------hccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEecC
Confidence 47999999964 566665 2347888899999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH------------H
Q 040242 505 GLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV------------L 572 (662)
Q Consensus 505 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~------------l 572 (662)
|+++..... .......||+.|+|||.+.+..++.++|||||||++|||++|+.||...+...... +
T Consensus 168 g~a~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 245 (359)
T cd07876 168 GLARTACTN--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEF 245 (359)
T ss_pred CCccccccC--ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHH
Confidence 999864332 22233578999999999998899999999999999999999999997553221100 0
Q ss_pred ----HHHHHHHhhcCcc------cccc----CCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 573 ----VDWVRELHSQGQI------TRAI----DPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 573 ----~~~~~~~~~~~~~------~~~i----d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
...+......... .+.. .+............+.+|+.+||+.||++|||+.|++++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 246 MNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000100000000 0000 000001111234567899999999999999999999985
No 149
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2e-36 Score=313.19 Aligned_cols=259 Identities=24% Similarity=0.397 Sum_probs=206.3
Q ss_pred cCCcccceeeeeCceEEEEEEeC-----CCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIP-----STGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~-----~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
++|...++||+|+||.||++... .++..+++|.+..........+.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 45677889999999999999742 3466899999887766677889999999999999999999999999999999
Q ss_pred EEeccCCCCcchhccccccc----------ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCe
Q 040242 430 VYDYVPNGSLDKLLFDNDQQ----------KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNP 499 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 499 (662)
+|||+++++|.+++...... ....+++..++.++.|++.||+|||+ .+++||||||+||++++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCE
Confidence 99999999999998654210 11358999999999999999999999 899999999999999999999
Q ss_pred EEeeccccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHH
Q 040242 500 KLGDFGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVR 577 (662)
Q Consensus 500 kL~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~ 577 (662)
||+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||......... ..+
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~---~~~- 237 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAI---ECI- 237 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHH---HHH-
Confidence 9999999976543211 11122345678999999988889999999999999999998 89998654322111 111
Q ss_pred HHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 578 ELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 578 ~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
..+. .. ..+...+..+.+++.+||+.||.+||++.+|++.|+.
T Consensus 238 ---~~~~-----~~---~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 238 ---TQGR-----EL---ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred ---HcCc-----cC---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 1111 00 1112234568899999999999999999999999863
No 150
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.8e-37 Score=325.00 Aligned_cols=244 Identities=26% Similarity=0.337 Sum_probs=193.8
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHH-HhhccccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEIT-SMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~-~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
++||+|+||+||+++...+|+.||+|++.... ....+++..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999998899999999997542 233445566654 56779999999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|+|..++.. ...+++.+...++.||++||.|||+ .+|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 81 ~~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~ 151 (325)
T cd05604 81 GELFFHLQR-----ERSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SD 151 (325)
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CC
Confidence 999988843 3468899999999999999999999 89999999999999999999999999998753222 12
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYF 596 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 596 (662)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... + ...... . .+ ..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~---~---~~~~~~-~--------~~-~~ 215 (325)
T cd05604 152 TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAE---M---YDNILH-K--------PL-VL 215 (325)
T ss_pred CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHH---H---HHHHHc-C--------Cc-cC
Confidence 2334578999999999998889999999999999999999999997643221 1 111111 1 01 01
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 597 DPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 597 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
.+.....+.+++.+|++.+|.+||++++.++.+
T Consensus 216 ~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i 248 (325)
T cd05604 216 RPGASLTAWSILEELLEKDRQRRLGAKEDFLEI 248 (325)
T ss_pred CCCCCHHHHHHHHHHhccCHHhcCCCCCCHHHH
Confidence 112345577889999999999999886444433
No 151
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.6e-36 Score=307.21 Aligned_cols=251 Identities=25% Similarity=0.405 Sum_probs=207.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..+.||+|++|.||+|....++..+++|.+..... .+++.+|++++++++|+||+++++++...+..++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 578889999999999999999988889999999876533 678999999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++... ...+++..+..++.|+++||.|||+ .+++|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~~~~L~~~l~~~----~~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (256)
T cd06612 81 GAGSVSDIMKIT----NKTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM 153 (256)
T ss_pred CCCcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCc
Confidence 999999998543 3568999999999999999999999 899999999999999999999999999998765432
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
. ......++..|+|||++.+..++.++||||||+++|||++|+.|+.......... . ......+. .
T Consensus 154 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~---------~---~~~~~~~~-~ 219 (256)
T cd06612 154 A-KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF---------M---IPNKPPPT-L 219 (256)
T ss_pred c-ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh---------h---hccCCCCC-C
Confidence 1 2233457889999999988889999999999999999999999997543321110 0 00000111 1
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
..+......+.+++.+|++.+|++||++.||+++
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 220 SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 1222344668899999999999999999999863
No 152
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=3.7e-36 Score=311.00 Aligned_cols=251 Identities=23% Similarity=0.349 Sum_probs=201.0
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
++|+..++||+|++|.||+|++..++..||+|.+... .....+++.+|++++.+++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3577789999999999999999889999999998655 334456789999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|..+. .+++.....++.|++.||.|||+ .+|+|+||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~ 148 (279)
T cd06619 81 MDGGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148 (279)
T ss_pred CCCCChHHhh---------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence 9999997543 36778888999999999999999 89999999999999999999999999999865432
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhH-HHHHHHHHHhhcCccccccCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMEL-VLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~-~l~~~~~~~~~~~~~~~~id~~ 592 (662)
......|+..|+|||++.+..++.++|||||||++|||++|+.||......... ....+... ... ...+.
T Consensus 149 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~-----~~~~~ 219 (279)
T cd06619 149 ---IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQC-IVD-----EDPPV 219 (279)
T ss_pred ---cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHH-Hhc-----cCCCC
Confidence 222346899999999998888999999999999999999999999643221110 00011110 000 01111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+. .......+.+++.+|++.+|++||+++|++++
T Consensus 220 ~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 220 LP--VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CC--CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 11 11234567889999999999999999999875
No 153
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=2.2e-36 Score=308.19 Aligned_cols=249 Identities=31% Similarity=0.452 Sum_probs=205.7
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..+.||+|++|.||+|.. .|+.||+|.+..... ..+++.+|+.++++++|+||+++++++......++||||+
T Consensus 6 ~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 6 KELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 5678889999999999999998 478899999976654 5678999999999999999999999999888999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.... ...+++..+..++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 83 AKGSLVDYLRSRG---RAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred CCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEccccccccccccc
Confidence 9999999986442 2368999999999999999999999 899999999999999999999999999998763322
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
. ....+..|+|||.+..+.++.++||||||++++||++ |+.||...... .+...+. .+. ..
T Consensus 157 ~----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~~----~~~-----~~-- 218 (256)
T cd05039 157 D----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPHVE----KGY-----RM-- 218 (256)
T ss_pred c----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHHh----cCC-----CC--
Confidence 1 2334678999999988889999999999999999997 99998754321 1111111 110 00
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
..+...+..+.+++.+||..+|++||++.+++++|.+
T Consensus 219 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 219 -EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred -CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 1122335678899999999999999999999999975
No 154
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=8.6e-37 Score=322.51 Aligned_cols=238 Identities=26% Similarity=0.350 Sum_probs=190.1
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHH-HhhccccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEIT-SMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~-~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
++||+|+||.||+|+...+++.||+|++.... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999998899999999997542 222344555654 67889999999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
++|..++.. ...++..+...++.||++||.|||+ .+|+||||||+||+++.++.+||+|||+++..... ..
T Consensus 81 ~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-~~ 151 (321)
T cd05603 81 GELFFHLQR-----ERCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP-EE 151 (321)
T ss_pred CCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC-CC
Confidence 999888743 3457888888999999999999999 89999999999999999999999999998753222 12
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYF 596 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 596 (662)
......||+.|+|||.+.+..++.++|||||||++|||++|+.||...... .+.+.+ . .. .+ ..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~---~~~~~i---~-~~--------~~-~~ 215 (321)
T cd05603 152 TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVS---QMYDNI---L-HK--------PL-QL 215 (321)
T ss_pred ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHH---HHHHHH---h-cC--------CC-CC
Confidence 233457899999999998888999999999999999999999999765321 111111 0 00 11 12
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHH
Q 040242 597 DPQEAELVLTLGLLCCDPHPDFRPSTR 623 (662)
Q Consensus 597 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 623 (662)
+......+.+++.+||+.+|.+||+..
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 216 PGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 223445688999999999999999753
No 155
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2e-36 Score=309.00 Aligned_cols=246 Identities=27% Similarity=0.385 Sum_probs=197.1
Q ss_pred eeeeeCceEEEEEEe--CCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCC
Q 040242 362 LVGSGGFGKVYRGVI--PSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG 437 (662)
Q Consensus 362 ~LG~G~~g~Vy~~~~--~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 437 (662)
.||+|+||.||+|.+ ..++..+|+|++.... ....+++..|+.++++++|+||+++++++. .+..++||||++++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999965 3567889999986543 344678999999999999999999999885 45678999999999
Q ss_pred CcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCc
Q 040242 438 SLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQ 517 (662)
Q Consensus 438 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~ 517 (662)
+|.+++.. ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++.........
T Consensus 81 ~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~ 152 (257)
T cd05116 81 PLNKFLQK-----NKHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY 152 (257)
T ss_pred cHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence 99999843 2458899999999999999999999 899999999999999999999999999998765432211
Q ss_pred --ceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 518 --TTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 518 --~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
.....++..|+|||.+....++.++|||||||++|||++ |+.||...... .+.+.+ ..+.. +
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~i----~~~~~-----~--- 217 (257)
T cd05116 153 KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGN---EVTQMI----ESGER-----M--- 217 (257)
T ss_pred eecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHH----HCCCC-----C---
Confidence 112234578999999988888999999999999999998 99999754322 111111 11110 1
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
..+......+.+++.+||+.||++||++.+|++.|++
T Consensus 218 ~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 218 ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 1122344668899999999999999999999999975
No 156
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=2.6e-36 Score=313.29 Aligned_cols=252 Identities=24% Similarity=0.374 Sum_probs=202.1
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
|+..+.||+|+||+||++....+++.||+|.+.... ......+.+|+.++++++|+|++++.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 666789999999999999998899999999986542 22335578899999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++.... ...+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05632 82 MNGGDLKFHIYNMG---NPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG 155 (285)
T ss_pred ccCccHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence 99999998886432 3469999999999999999999999 89999999999999999999999999999765432
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||.......... .+.... ... .
T Consensus 156 ~--~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~--~~~~~~-~~~------~--- 221 (285)
T cd05632 156 E--SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKRE--EVDRRV-LET------E--- 221 (285)
T ss_pred C--cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHH--HHHHhh-hcc------c---
Confidence 1 2233468999999999988889999999999999999999999997543321111 111111 100 0
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPS-----TRRVVQF 628 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~eVl~~ 628 (662)
..+.......+.+|+..|++.||++||+ +.+++++
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 222 EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 1112233456788999999999999999 5566653
No 157
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.7e-36 Score=307.52 Aligned_cols=253 Identities=28% Similarity=0.437 Sum_probs=202.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|...+.||+|++|.||++.+... ..+|+|.+.... ...+.+.+|+.++++++|+|++++++++. .+..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 4577788999999999999998544 569999886543 23467889999999999999999999885 45688999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.... ...++|..+..++.|++.||.|||+ .+++|+||||+||++++++.++|+|||+++......
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~ 156 (260)
T cd05069 83 GKGSLLDFLKEGD---GKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNE 156 (260)
T ss_pred CCCCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCc
Confidence 9999999996542 3458999999999999999999999 899999999999999999999999999998764432
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
........++..|+|||...+..++.++||||||+++|||++ |+.||....... ...++.. + ..+
T Consensus 157 ~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~~----~-----~~~-- 222 (260)
T cd05069 157 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE---VLEQVER----G-----YRM-- 222 (260)
T ss_pred ccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHc----C-----CCC--
Confidence 222222346778999999988889999999999999999999 888987543221 1111111 1 001
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
......+..+.+++.+||+.+|++||++.+|+++|+.
T Consensus 223 -~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 -PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred -CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1122345678899999999999999999999999874
No 158
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8.8e-37 Score=329.75 Aligned_cols=253 Identities=22% Similarity=0.316 Sum_probs=198.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|+||+||++....+++.||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 46888999999999999999999999999999986542 334567889999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++|+|.+++... ..+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++.+.
T Consensus 81 E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~ 152 (377)
T cd05629 81 EFLPGGDLMTMLIKY-----DTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFH 152 (377)
T ss_pred eCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeecccccccc
Confidence 999999999998542 457888899999999999999999 899999999999999999999999999996432
Q ss_pred CCCCC----------------------------------------------cceecccCCcccCcccccCCCCCcchhHH
Q 040242 512 HNINP----------------------------------------------QTTHIVGTLGYLAPELTRTGKATTSTDVF 545 (662)
Q Consensus 512 ~~~~~----------------------------------------------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~ 545 (662)
..... ......||+.|+|||++.+..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 232 (377)
T cd05629 153 KQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWW 232 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeE
Confidence 11000 00124699999999999888899999999
Q ss_pred HHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCC---CCCH
Q 040242 546 GFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDF---RPST 622 (662)
Q Consensus 546 S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~---RPt~ 622 (662)
||||++|||++|+.||......... ....... +.+ .+.. .......+.+++.+|+. +|.+ ||++
T Consensus 233 SlGvil~elltG~~Pf~~~~~~~~~------~~i~~~~---~~~--~~p~-~~~~s~~~~dli~~lL~-~~~~r~~r~~~ 299 (377)
T cd05629 233 SLGAIMFECLIGWPPFCSENSHETY------RKIINWR---ETL--YFPD-DIHLSVEAEDLIRRLIT-NAENRLGRGGA 299 (377)
T ss_pred ecchhhhhhhcCCCCCCCCCHHHHH------HHHHccC---Ccc--CCCC-CCCCCHHHHHHHHHHhc-CHhhcCCCCCH
Confidence 9999999999999999754432111 1110000 000 0000 01123457788888997 6665 4699
Q ss_pred HHHHHH
Q 040242 623 RRVVQF 628 (662)
Q Consensus 623 ~eVl~~ 628 (662)
.|++++
T Consensus 300 ~~~l~h 305 (377)
T cd05629 300 HEIKSH 305 (377)
T ss_pred HHHhcC
Confidence 999986
No 159
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-37 Score=294.20 Aligned_cols=264 Identities=25% Similarity=0.318 Sum_probs=214.8
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccC-----ee
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD-----EL 427 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~-----~~ 427 (662)
..++|.+.++||+|||+.||.++...++..+|+|++.....+..+..++|++..++++|||++++++++..+. +.
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 3478999999999999999999988899999999998888888889999999999999999999999986554 48
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccc
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLA 507 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla 507 (662)
||+++|...|+|.+.+..... +...+++.+.+.|+.++.+||++||+. .+++.||||||.|||+.+++.++|.|||.+
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~-kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKI-KGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEeehhccccHHHHHHHHhh-cCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCc
Confidence 999999999999999965532 245799999999999999999999983 245999999999999999999999999998
Q ss_pred ccccCCCCCc--------ceecccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHH
Q 040242 508 RAYDHNINPQ--------TTHIVGTLGYLAPELTR---TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWV 576 (662)
Q Consensus 508 ~~~~~~~~~~--------~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~ 576 (662)
....-..... .....-|..|.|||.+. +...++++|||||||+||+|+.|..||+.....
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~--------- 247 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ--------- 247 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc---------
Confidence 8654322111 11234588999999875 345789999999999999999999999743211
Q ss_pred HHHhhcCcccc-ccCCCC-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 577 RELHSQGQITR-AIDPTL-DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 577 ~~~~~~~~~~~-~id~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
.+.+.- ...+.+ ........+.+.+++.+|++.||.+||++.+++..+...
T Consensus 248 -----GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 248 -----GGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred -----CCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 111221 223333 122233778899999999999999999999999988654
No 160
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=2.2e-36 Score=327.24 Aligned_cols=252 Identities=25% Similarity=0.338 Sum_probs=195.4
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
.|+..++||+|+||+||+|+...+++.||+|++.... ......+.+|+.++++++|+||+++++.+..++..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5788999999999999999999899999999997642 3345678899999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
||++|+|.+++.+. ..+++.....++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.+..
T Consensus 82 ~~~gg~L~~~l~~~-----~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~ 153 (382)
T cd05625 82 YIPGGDMMSLLIRM-----GIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (382)
T ss_pred CCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCccccc
Confidence 99999999998543 357888888999999999999999 8999999999999999999999999999753311
Q ss_pred CC----------------------------------------------CCcceecccCCcccCcccccCCCCCcchhHHH
Q 040242 513 NI----------------------------------------------NPQTTHIVGTLGYLAPELTRTGKATTSTDVFG 546 (662)
Q Consensus 513 ~~----------------------------------------------~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S 546 (662)
.. ........||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwS 233 (382)
T cd05625 154 THDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 233 (382)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEe
Confidence 00 00011246899999999998888999999999
Q ss_pred HHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCC---HH
Q 040242 547 FGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPS---TR 623 (662)
Q Consensus 547 ~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt---~~ 623 (662)
|||++|||++|+.||.......... ...... ...-.+...... ..+.+++.+|+ .+|.+|++ +.
T Consensus 234 lGvil~elltG~~Pf~~~~~~~~~~------~i~~~~--~~~~~p~~~~~s----~~~~~li~~l~-~~p~~R~~~~~~~ 300 (382)
T cd05625 234 VGVILYEMLVGQPPFLAQTPLETQM------KVINWQ--TSLHIPPQAKLS----PEASDLIIKLC-RGPEDRLGKNGAD 300 (382)
T ss_pred chHHHHHHHhCCCCCCCCCHHHHHH------HHHccC--CCcCCCCcccCC----HHHHHHHHHHc-cCHhHcCCCCCHH
Confidence 9999999999999998654321110 000000 000011111222 33444454554 49999997 88
Q ss_pred HHHHH
Q 040242 624 RVVQF 628 (662)
Q Consensus 624 eVl~~ 628 (662)
+++++
T Consensus 301 ei~~h 305 (382)
T cd05625 301 EIKAH 305 (382)
T ss_pred HHhcC
Confidence 88764
No 161
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.1e-36 Score=318.71 Aligned_cols=256 Identities=24% Similarity=0.282 Sum_probs=199.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|+||.||+++...+++.||+|++.+. .....+.+.+|+.++..++|+||+++++++..++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 4688899999999999999999888999999999753 2233456889999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++|+|.+++... ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++....
T Consensus 81 e~~~g~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 153 (331)
T cd05597 81 DYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL 153 (331)
T ss_pred ecCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence 999999999999542 3458889999999999999999999 899999999999999999999999999997665
Q ss_pred CCCCCcceecccCCcccCcccccC-----CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccc
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRT-----GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQIT 586 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 586 (662)
...........||+.|+|||++.. ..++.++|||||||++|||++|+.||....... ............
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~------~~~~i~~~~~~~ 227 (331)
T cd05597 154 ADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHKEHF 227 (331)
T ss_pred CCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHH------HHHHHHcCCCcc
Confidence 433333333568999999999863 457889999999999999999999997543211 111111111101
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHccC--CCCCCCCCHHHHHHH
Q 040242 587 RAIDPTLDYFDPQEAELVLTLGLLCCD--PHPDFRPSTRRVVQF 628 (662)
Q Consensus 587 ~~id~~l~~~~~~~~~~l~~l~~~Cl~--~dP~~RPt~~eVl~~ 628 (662)
. +.+... .....+.+++.+|+. .++..||++++++++
T Consensus 228 ~-~~~~~~----~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 228 Q-FPPDVT----DVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred c-CCCccC----CCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 1 111111 133445666666554 444458999999986
No 162
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.1e-36 Score=312.66 Aligned_cols=259 Identities=27% Similarity=0.406 Sum_probs=206.0
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCc----EEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGL----EVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~----~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
++|+..++||+|+||+||+|.+..++. .||+|.+... .....+++.+|+.++..++|+||++++++|.. ...++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~l 85 (279)
T cd05109 7 TELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQL 85 (279)
T ss_pred hheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcEE
Confidence 568888999999999999999766665 4899998654 33445678999999999999999999999975 45789
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
++||+++|+|.+++... ...+++.+++.++.|+++||.|||+ .+++||||||+||+++.++.+||+|||+++.
T Consensus 86 ~~~~~~~g~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 86 VTQLMPYGCLLDYVREN----KDRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEcCCCCCHHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceee
Confidence 99999999999998653 3458999999999999999999999 8999999999999999999999999999987
Q ss_pred ccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCcccc
Q 040242 510 YDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITR 587 (662)
Q Consensus 510 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 587 (662)
....... ......++..|+|||...+..++.++|||||||++|||++ |..||...... .+..++. .+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~---~~~~~~~----~~~~-- 229 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAR---EIPDLLE----KGER-- 229 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHH----CCCc--
Confidence 6533211 1112234678999999988889999999999999999998 88998654322 1222221 1110
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCCC
Q 040242 588 AIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDASLP 636 (662)
Q Consensus 588 ~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~~p 636 (662)
. .........+.+++.+||+.||++||++.++++.|......|
T Consensus 230 -~-----~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 230 -L-----PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred -C-----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 0 111223456889999999999999999999999997765554
No 163
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.8e-36 Score=307.08 Aligned_cols=255 Identities=25% Similarity=0.366 Sum_probs=209.6
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..+.||+|++|.||++....++..+++|.+........+.+.+|+.++++++||||+++++++...+..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57888999999999999999998888999999998776666788999999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++... ...+++.++..++.|++.||.|||+ .+++|+||+|+||+++.++.+||+|||++.......
T Consensus 83 ~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 155 (262)
T cd06613 83 GGGSLQDIYQVT----RGPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI 155 (262)
T ss_pred CCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence 999999988543 2468899999999999999999999 899999999999999999999999999998655432
Q ss_pred CCcceecccCCcccCcccccCC---CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTG---KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~---~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
. ......++..|+|||.+... .++.++|||||||++|||++|+.|+.......... .. .. ....+
T Consensus 156 ~-~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~--~~-----~~----~~~~~ 223 (262)
T cd06613 156 A-KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALF--LI-----SK----SNFPP 223 (262)
T ss_pred h-ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHH--HH-----Hh----ccCCC
Confidence 1 22234678899999998776 78899999999999999999999997544321111 00 00 00111
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
............+.+++.+||+.+|.+||++.+|+.+
T Consensus 224 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 224 PKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred ccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1111223445678999999999999999999999853
No 164
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.7e-36 Score=307.33 Aligned_cols=251 Identities=21% Similarity=0.340 Sum_probs=205.5
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
+|+..+.||+|+||.||++....++..+|+|.+... .....+.+..|+.++++++|+||+++++.+..++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 467789999999999999999889999999998653 3345567889999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.... ...+++...+.++.|++.||.|||+ .+++|+||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~l~~~~~~~~---~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 154 (255)
T cd08219 81 DGGDLMQKIKLQR---GKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG 154 (255)
T ss_pred CCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeecccc
Confidence 9999999885432 3457889999999999999999999 899999999999999999999999999998664322
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
.......|+..|+|||++.+..++.++||||||+++|+|++|+.||........ .... ..+.. .
T Consensus 155 -~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~------~~~~-~~~~~--------~ 218 (255)
T cd08219 155 -AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNL------ILKV-CQGSY--------K 218 (255)
T ss_pred -cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHH------HHHH-hcCCC--------C
Confidence 122335688999999999888899999999999999999999999975432111 1111 11111 1
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
..+......+.+++.+||+.||++||++.+++..
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1122234567889999999999999999999864
No 165
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.1e-36 Score=318.93 Aligned_cols=257 Identities=28% Similarity=0.458 Sum_probs=202.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCc--EEEEEEeecc-chhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGL--EVAIKRVAHN-SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~--~vavK~~~~~-~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV 430 (662)
++|+..+.||+|+||.||+|.+..++. .+++|++... .....+++.+|+.++.++ +|+||+++++++...+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 567888999999999999999876665 4577777543 344556888999999999 899999999999999999999
Q ss_pred EeccCCCCcchhcccccc-----------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCe
Q 040242 431 YDYVPNGSLDKLLFDNDQ-----------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNP 499 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 499 (662)
|||+++++|.+++..... .....+++.+++.++.|++.||+|||+ .+++||||||+|||++.++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcE
Confidence 999999999999965421 112468999999999999999999999 899999999999999999999
Q ss_pred EEeeccccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHH
Q 040242 500 KLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRE 578 (662)
Q Consensus 500 kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~ 578 (662)
||+|||+++..... .......++..|+|||.+.+..++.++|||||||++|||+| |..||....... ..+ .
T Consensus 164 kl~dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~~---~ 235 (303)
T cd05088 164 KIADFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE---LYE---K 235 (303)
T ss_pred EeCccccCcccchh--hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHH---HHH---H
Confidence 99999998743221 11112234678999999988888999999999999999998 999986543221 111 1
Q ss_pred HhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 579 LHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 579 ~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
. ..+ . .. ..+......+.+|+.+|++.+|++||++.++++.|..
T Consensus 236 ~-~~~-----~--~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~ 279 (303)
T cd05088 236 L-PQG-----Y--RL-EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 279 (303)
T ss_pred H-hcC-----C--cC-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1 100 0 00 1111234567899999999999999999999998864
No 166
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.3e-36 Score=315.30 Aligned_cols=257 Identities=23% Similarity=0.384 Sum_probs=205.5
Q ss_pred cCCcccceeeeeCceEEEEEEe-----CCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVI-----PSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDEL 427 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~-----~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~ 427 (662)
++|...+.||+|+||.||++.. ...+..||||++.... ....+.+.+|+.+++++ +|+||+++++++...+..
T Consensus 35 ~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 114 (302)
T cd05055 35 NNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGPI 114 (302)
T ss_pred HHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCce
Confidence 5688899999999999999975 2345689999987543 33456789999999999 799999999999999999
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccc
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLA 507 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla 507 (662)
++||||+++|+|.+++.... ...+++.++..++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||++
T Consensus 115 ~lv~e~~~~~~L~~~i~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 115 LVITEYCCYGDLLNFLRRKR---ESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred EEEEEcCCCCcHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEECCCccc
Confidence 99999999999999996432 2348999999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCcc
Q 040242 508 RAYDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQI 585 (662)
Q Consensus 508 ~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 585 (662)
+........ ......++..|+|||.+.++.++.++||||+||++|||++ |+.||........ +...+ ..+.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~--~~~~~----~~~~- 261 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSK--FYKLI----KEGY- 261 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHH--HHHHH----HcCC-
Confidence 865433211 1122345778999999988889999999999999999998 9999875432211 11111 1111
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 586 TRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 586 ~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
.+ .........+.+++.+|++.+|++||++.|+++.|++
T Consensus 262 ----~~---~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 262 ----RM---AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred ----cC---CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 00 0111234568899999999999999999999999875
No 167
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.1e-36 Score=309.14 Aligned_cols=254 Identities=28% Similarity=0.473 Sum_probs=206.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|...++||+|++|.||+|... ++..|+||.+.... ...+++.+|+.++++++|+||+++++++......++||||+
T Consensus 6 ~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 6 ESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 57888999999999999999985 56789999987543 33567899999999999999999999999889999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.... ...+++.++..++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~~L~~~i~~~~---~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 84 SKGSLLDFLKSGE---GKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred CCCCHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 9999999996543 3468999999999999999999999 899999999999999999999999999998765432
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
........++..|+|||.+.+..++.++||||||++++||++ |+.||....... ..+.+.. + ...
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~~~~~~----~-----~~~-- 223 (261)
T cd05034 158 YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNRE---VLEQVER----G-----YRM-- 223 (261)
T ss_pred hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHc----C-----CCC--
Confidence 222222334678999999988889999999999999999998 999986543221 1111110 0 000
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
..+...+..+.+++.+|++.+|++||++.++.+.|+.
T Consensus 224 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 224 -PRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred -CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 1111235678899999999999999999999999864
No 168
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1e-36 Score=321.54 Aligned_cols=239 Identities=25% Similarity=0.337 Sum_probs=193.6
Q ss_pred ceeeeeCceEEEEEEe---CCCCcEEEEEEeeccch--hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccC
Q 040242 361 NLVGSGGFGKVYRGVI---PSTGLEVAIKRVAHNSR--QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVP 435 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~---~~~g~~vavK~~~~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 435 (662)
+.||+|+||.||++.. ..+|+.||+|++..... .....+..|++++++++||||+++++++...+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999876 35688999999976432 234567789999999999999999999999999999999999
Q ss_pred CCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC
Q 040242 436 NGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN 515 (662)
Q Consensus 436 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~ 515 (662)
+|+|.+++.. ...+++..+..++.||++||.|||+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~- 152 (318)
T cd05582 82 GGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE- 152 (318)
T ss_pred CCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCC-
Confidence 9999998843 3458999999999999999999999 899999999999999999999999999998654321
Q ss_pred CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCC
Q 040242 516 PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDY 595 (662)
Q Consensus 516 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 595 (662)
.......|++.|+|||.+.+..++.++|||||||++|||++|+.||....... .. ..... .. ..
T Consensus 153 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~---~~---~~i~~-~~---------~~ 216 (318)
T cd05582 153 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE---TM---TMILK-AK---------LG 216 (318)
T ss_pred CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH---HH---HHHHc-CC---------CC
Confidence 22334578999999999988888999999999999999999999997543221 11 11111 10 01
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 040242 596 FDPQEAELVLTLGLLCCDPHPDFRPSTRR 624 (662)
Q Consensus 596 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e 624 (662)
.+......+.+++.+||+.||++||++.+
T Consensus 217 ~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 217 MPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 12223456788999999999999999433
No 169
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.8e-36 Score=314.55 Aligned_cols=250 Identities=25% Similarity=0.393 Sum_probs=202.5
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
|+..++||+|+||.||++....+++.||||.+.... ......+..|+.++++++|+|++++++.+..++..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667889999999999999999999999999986542 22345678899999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++.... ...+++.++..++.|++.||.|||+ .+|+||||||+||+++.++.++|+|||++......
T Consensus 82 ~~g~~L~~~l~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05630 82 MNGGDLKFHIYHMG---EAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 155 (285)
T ss_pred cCCCcHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence 99999999885432 3458899999999999999999999 89999999999999999999999999998765432
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhh-HHHHHHHHHHhhcCccccccCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAME-LVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~-~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
. ......|+..|+|||.+.+..++.++|||||||++|||++|+.||........ ......... ...
T Consensus 156 ~--~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~----------~~~- 222 (285)
T cd05630 156 Q--TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE----------VQE- 222 (285)
T ss_pred c--cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhh----------hhh-
Confidence 2 11234689999999999988899999999999999999999999975432111 111100000 000
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRPS-----TRRVVQ 627 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~eVl~ 627 (662)
.+.......+.+|+.+||+.||++||+ +.|+++
T Consensus 223 --~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 223 --EYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred --hcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 111223455788999999999999999 888887
No 170
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2e-36 Score=310.99 Aligned_cols=255 Identities=27% Similarity=0.450 Sum_probs=204.7
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCc---EEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGL---EVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~---~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
.|+..+.||+|+||.||+|....++. .||||.+... ......+|..|+.++++++||||+++++++..++..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 46778999999999999999876554 6999998764 3445678999999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++++|.+++... ...+++.+++.++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++....
T Consensus 85 e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 157 (269)
T cd05065 85 EFMENGALDSFLRQN----DGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFLE 157 (269)
T ss_pred ecCCCCcHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCccccccc
Confidence 999999999998654 3458999999999999999999999 899999999999999999999999999988654
Q ss_pred CCCCCc-cee-cc--cCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccc
Q 040242 512 HNINPQ-TTH-IV--GTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQIT 586 (662)
Q Consensus 512 ~~~~~~-~~~-~~--gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 586 (662)
...... ... .. .+..|+|||++....++.++|||||||++|||++ |..||...... ....++...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~---~~~~~i~~~------- 227 (269)
T cd05065 158 DDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQ---DVINAIEQD------- 227 (269)
T ss_pred cCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHH---HHHHHHHcC-------
Confidence 432211 111 11 2457999999988899999999999999999886 99998754322 122222110
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 587 RAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 587 ~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
. .+ ....+.+..+.+++.+||+.+|++||++.+|++.|++.
T Consensus 228 --~--~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 --Y--RL-PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --C--cC-CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 00 01123345678899999999999999999999998753
No 171
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.1e-36 Score=320.44 Aligned_cols=250 Identities=23% Similarity=0.301 Sum_probs=198.4
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
++||+|+||+||++....+++.||+|++.... ....+.+..|+.++.++ +||||+++++++...+.+++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999999899999999997642 23456688899999888 699999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|+|..++.. ...+++..+..++.|+++||+|||+ .+|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 81 ~~L~~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~ 151 (327)
T cd05617 81 GDLMFHMQR-----QRKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP-GD 151 (327)
T ss_pred CcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccCC-CC
Confidence 999988743 2458999999999999999999999 89999999999999999999999999998753221 12
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYF 596 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 596 (662)
......||+.|+|||++.+..++.++|||||||++|||++|+.||............+++.+...... . ..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--------~-~~ 222 (327)
T cd05617 152 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKP--------I-RI 222 (327)
T ss_pred ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCC--------C-CC
Confidence 22345789999999999988999999999999999999999999964322111111222222221110 0 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCC------HHHHHHH
Q 040242 597 DPQEAELVLTLGLLCCDPHPDFRPS------TRRVVQF 628 (662)
Q Consensus 597 ~~~~~~~l~~l~~~Cl~~dP~~RPt------~~eVl~~ 628 (662)
+......+.+++.+||+.||.+||+ +.+++++
T Consensus 223 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 223 PRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 2223455778999999999999998 4577653
No 172
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.2e-36 Score=314.49 Aligned_cols=261 Identities=25% Similarity=0.390 Sum_probs=211.9
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..+.||.|++|.||+|....+++.|++|.+........+.+.+|+.+++.++|+|++++++++...+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 46888999999999999999998899999999997665555678899999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|..++. ...+++.++..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~L~~~~~------~~~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~ 169 (296)
T cd06655 99 AGGSLTDVVT------ETCMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ 169 (296)
T ss_pred CCCcHHHHHH------hcCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhccccc
Confidence 9999999884 2358999999999999999999999 899999999999999999999999999988654332
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
. ......++..|+|||.+.+..++.++|||||||++|||++|+.||.......... .+. . .. .+.+
T Consensus 170 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~---~~~---~-~~-----~~~~- 235 (296)
T cd06655 170 S-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---LIA---T-NG-----TPEL- 235 (296)
T ss_pred c-cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHH---h-cC-----Cccc-
Confidence 1 2223468899999999988889999999999999999999999997654322111 010 0 00 0111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhcCCCCCCC
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF--LLRDASLPQA 638 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~--L~~~~~~p~~ 638 (662)
..+......+.+++.+||..+|++||++.+++++ +....+...+
T Consensus 236 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~~~~~ 281 (296)
T cd06655 236 QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPLSSL 281 (296)
T ss_pred CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhccccccC
Confidence 1122234567789999999999999999999973 4444444433
No 173
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.3e-36 Score=313.58 Aligned_cols=260 Identities=26% Similarity=0.383 Sum_probs=211.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..+.||+|++|.||+++...++..||+|.+........+.+.+|+.+++.++|+||+++++++...+..++||||+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 98 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 98 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeeccc
Confidence 67888999999999999999998889999999997765555677889999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.+ ..+++.++..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++.......
T Consensus 99 ~~~~L~~~~~~------~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 99 AGGSLTDVVTE------TCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred CCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 99999999842 347889999999999999999999 899999999999999999999999999998654332
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
. ......+++.|+|||.+.+..++.++|||||||++|+|++|+.||.......... . ....-.+.+
T Consensus 170 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~---------~---~~~~~~~~~- 235 (297)
T cd06656 170 S-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY---------L---IATNGTPEL- 235 (297)
T ss_pred c-CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee---------e---eccCCCCCC-
Confidence 1 2223468899999999988889999999999999999999999997543221100 0 000000111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhcCCCCCC
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ--FLLRDASLPQ 637 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~--~L~~~~~~p~ 637 (662)
..+......+.+++.+||+.+|++||++.++++ .+....+.+.
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~ 280 (297)
T cd06656 236 QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSS 280 (297)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccccccc
Confidence 112234456788999999999999999999998 4444444443
No 174
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.4e-36 Score=310.14 Aligned_cols=255 Identities=27% Similarity=0.459 Sum_probs=204.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCC---cEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTG---LEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g---~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
.+|+..+.||+|+||.||+|....++ ..+|+|.+.... ....+.+.+|+.++.+++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46788899999999999999885433 379999986543 33456889999999999999999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
|||+++++|.+++... ...+++.+++.++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++...
T Consensus 84 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 84 TEYMENGSLDAFLRKH----DGQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred EEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 9999999999999643 2458999999999999999999999 89999999999999999999999999999876
Q ss_pred cCCCCCcce--ecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCcccc
Q 040242 511 DHNINPQTT--HIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITR 587 (662)
Q Consensus 511 ~~~~~~~~~--~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 587 (662)
......... ...++..|+|||.+.+..++.++||||||+++||+++ |+.||....... ...++. ++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~---~~~~~~----~~~--- 226 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQD---VIKAIE----EGY--- 226 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHH---HHHHHh----CCC---
Confidence 543221111 1223568999999988889999999999999999886 999987543221 111211 110
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 588 AIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 588 ~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
... .....+..+.+++.+|++.+|.+||+|.++++.|.+
T Consensus 227 --~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 227 --RLP---APMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred --cCC---CCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 000 112234567899999999999999999999999875
No 175
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.9e-36 Score=312.36 Aligned_cols=262 Identities=24% Similarity=0.396 Sum_probs=205.8
Q ss_pred hccCCcccceeeeeCceEEEEEEeCC-----CCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCe
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPS-----TGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDE 426 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~-----~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~ 426 (662)
.+++|+..++||+|+||.||+|..+. .+..||+|.+.... ......+.+|+..+++++|+||+++++++.....
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 45778899999999999999997642 34579999886543 2334568899999999999999999999999999
Q ss_pred eeEEEeccCCCCcchhcccccc-----cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEE
Q 040242 427 LLLVYDYVPNGSLDKLLFDNDQ-----QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKL 501 (662)
Q Consensus 427 ~~lV~E~~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL 501 (662)
.++||||+++|+|.+++..... .....+++..+..++.|++.||.|||+ ++++||||||+||+++.++.+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEE
Confidence 9999999999999999964321 112446778889999999999999999 89999999999999999999999
Q ss_pred eeccccccccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHH
Q 040242 502 GDFGLARAYDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVREL 579 (662)
Q Consensus 502 ~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~ 579 (662)
+|||+++........ ......++..|+|||.+.++.++.++|||||||++|||++ |..||....... ..+.+
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~---~~~~~--- 234 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ---VLKFV--- 234 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHH---
Confidence 999999865432211 1122345678999999988889999999999999999998 788886543221 11111
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 580 HSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 580 ~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
. .+ .....+......+.+++.+|++.+|++||++.++++.|.+.
T Consensus 235 ~-~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 235 M-DG--------GYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred H-cC--------CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1 11 11111223346789999999999999999999999999875
No 176
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.8e-36 Score=313.23 Aligned_cols=260 Identities=24% Similarity=0.375 Sum_probs=206.5
Q ss_pred ccCCcccceeeeeCceEEEEEEeCC-----CCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCee
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPS-----TGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDEL 427 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~-----~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~ 427 (662)
.++|+..+.||+|+||.||++.... ++..||+|.+.... ....+++.+|+.++++++||||++++++|...+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 3678889999999999999998743 56789999987643 34456799999999999999999999999999999
Q ss_pred eEEEeccCCCCcchhcccccc-----------------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCc
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQ-----------------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSN 490 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~-----------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N 490 (662)
++||||+++|+|.+++..... .....+++.+++.++.|++.||.|||+ .+++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhh
Confidence 999999999999999964321 112357899999999999999999999 899999999999
Q ss_pred eEeCCCCCeEEeeccccccccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchh
Q 040242 491 VLIDADLNPKLGDFGLARAYDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAM 568 (662)
Q Consensus 491 Ill~~~~~~kL~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~ 568 (662)
|+++.++.++|+|||+++........ .......+..|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~ 240 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEE 240 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 99999999999999998765332211 1122234678999999988889999999999999999998 888886443221
Q ss_pred hHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 569 ELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 569 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
+... ...++. ...+......+.+++.+|++.+|++||++.|+++.|++
T Consensus 241 ------~~~~-~~~~~~--------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 241 ------VIYY-VRDGNV--------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred ------HHHH-HhcCCC--------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 1111 111111 11122345678899999999999999999999999874
No 177
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=3.1e-36 Score=334.46 Aligned_cols=286 Identities=22% Similarity=0.309 Sum_probs=207.5
Q ss_pred HHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcccc------ccceeeeeeEec
Q 040242 350 LYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRH------RNLVQLHGWCRK 423 (662)
Q Consensus 350 l~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H------~niv~l~~~~~~ 423 (662)
+...+++|++.++||+|+||+||+|.+...++.||||++.... ...+++..|+.++++++| .+++++++++..
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3445688999999999999999999998889999999996532 223345566666666654 458889998876
Q ss_pred c-CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCC-----
Q 040242 424 Q-DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADL----- 497 (662)
Q Consensus 424 ~-~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----- 497 (662)
. ...++|||++ +++|.+++.. ...+++..+..++.||+.||.|||+. .+|+||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~-----~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMK-----HGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCccccc
Confidence 5 4789999998 7888888853 24689999999999999999999972 4899999999999998765
Q ss_pred -----------CeEEeeccccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccc
Q 040242 498 -----------NPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRT 566 (662)
Q Consensus 498 -----------~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~ 566 (662)
.+||+|||++..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~ 350 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDN 350 (467)
T ss_pred ccccccCCCCceEEECCCCccccCcc----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 499999998764322 23346799999999999998999999999999999999999999986544
Q ss_pred hhhHHHHH---------HHHH--------Hhhc-CccccccCCCC-----C---CCCHHHHHHHHHHHHHccCCCCCCCC
Q 040242 567 AMELVLVD---------WVRE--------LHSQ-GQITRAIDPTL-----D---YFDPQEAELVLTLGLLCCDPHPDFRP 620 (662)
Q Consensus 567 ~~~~~l~~---------~~~~--------~~~~-~~~~~~id~~l-----~---~~~~~~~~~l~~l~~~Cl~~dP~~RP 620 (662)
.....+.. |... .+.. +.+....++.. . .........+.+|+.+||+.||.+||
T Consensus 351 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ 430 (467)
T PTZ00284 351 LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL 430 (467)
T ss_pred HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC
Confidence 32222111 1100 0000 00000111100 0 00011235578999999999999999
Q ss_pred CHHHHHHH--Hhc----CCCCCCCCCCCCCCCCC
Q 040242 621 STRRVVQF--LLR----DASLPQAPLDIHHEFPR 648 (662)
Q Consensus 621 t~~eVl~~--L~~----~~~~p~~p~~~~~~~~~ 648 (662)
|++|++++ +.+ +...|..|..++...+.
T Consensus 431 ta~e~L~Hp~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (467)
T PTZ00284 431 NARQMTTHPYVLKYYPECRQHPNYPDNRSMLRPT 464 (467)
T ss_pred CHHHHhcCccccccCCccccCCCCCCccccCCCC
Confidence 99999983 433 44567776665554443
No 178
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.4e-36 Score=307.48 Aligned_cols=247 Identities=25% Similarity=0.385 Sum_probs=196.8
Q ss_pred eeeeeCceEEEEEEeC--CCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCC
Q 040242 362 LVGSGGFGKVYRGVIP--STGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGS 438 (662)
Q Consensus 362 ~LG~G~~g~Vy~~~~~--~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gs 438 (662)
.||+|+||.||+|.+. ..+..||+|.+.... ....+.+.+|+.++++++|+||++++++|. .+..++||||+++++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence 3899999999999874 345679999986653 334567899999999999999999999885 457899999999999
Q ss_pred cchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCc-
Q 040242 439 LDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQ- 517 (662)
Q Consensus 439 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~- 517 (662)
|.+++... ...+++..+++++.|+++||.|||+ .+++||||||+||+++.++.+||+|||+++.........
T Consensus 81 L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 153 (257)
T cd05115 81 LNKFLSGK----KDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYK 153 (257)
T ss_pred HHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCcccee
Confidence 99998543 3468999999999999999999999 899999999999999999999999999998654432211
Q ss_pred -ceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCC
Q 040242 518 -TTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDY 595 (662)
Q Consensus 518 -~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 595 (662)
.....++..|+|||.+....++.++|||||||++|||++ |+.||....... ....+ ..+.. ..
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~----~~~~~--------~~ 218 (257)
T cd05115 154 ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPE---VMSFI----EQGKR--------LD 218 (257)
T ss_pred ccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHH---HHHHH----HCCCC--------CC
Confidence 111233578999999988889999999999999999996 999997543321 11111 11110 11
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 596 FDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 596 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
.+......+.+++.+||..+|++||++.+|.+.|+.
T Consensus 219 ~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 219 CPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 223345678889999999999999999999999875
No 179
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=3.5e-36 Score=322.38 Aligned_cols=263 Identities=23% Similarity=0.268 Sum_probs=201.4
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEecc------
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ------ 424 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~------ 424 (662)
..++|+..+.||+|+||.||++.....++.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 457899999999999999999999888999999998654 233456788999999999999999999988543
Q ss_pred CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 425 DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 425 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
...++||||++ ++|.+.+ ...+++..+..++.|+++||.|||+ .+|+||||||+||+++.++.+||+||
T Consensus 95 ~~~~lv~e~~~-~~l~~~~-------~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~kl~Df 163 (355)
T cd07874 95 QDVYLVMELMD-ANLCQVI-------QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 163 (355)
T ss_pred ceeEEEhhhhc-ccHHHHH-------hhcCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCEEEeeC
Confidence 35799999995 4676666 2347888999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHH------------
Q 040242 505 GLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVL------------ 572 (662)
Q Consensus 505 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l------------ 572 (662)
|+++...... ......||..|+|||.+.+..++.++|||||||++|||++|+.||..........-
T Consensus 164 g~~~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (355)
T cd07874 164 GLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 241 (355)
T ss_pred cccccCCCcc--ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 9998654321 22335689999999999888899999999999999999999999976542211100
Q ss_pred ----HHHHHHHhhcC-ccccccCC-----CC----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 573 ----VDWVRELHSQG-QITRAIDP-----TL----DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 573 ----~~~~~~~~~~~-~~~~~id~-----~l----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
...+....... .......+ .+ ..........+.+++.+||+.||++|||+.|++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00001100000 00000000 00 11112234567899999999999999999999986
No 180
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=5.8e-36 Score=305.00 Aligned_cols=251 Identities=24% Similarity=0.381 Sum_probs=205.0
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEec-cCeeeEEEe
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRK-QDELLLVYD 432 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~-~~~~~lV~E 432 (662)
+|+..+.||+|++|.||++....+++.||+|++.... ....+.+.+|++++++++|+|++++++.+.. ....+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788899999999999999998889999999986542 3445678899999999999999999998764 446899999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|+++++|.+++.... ...+++.++..++.+++.||.|||+ .+++|+||||+||+++.++.++|+|||++.....
T Consensus 81 ~~~~~~l~~~l~~~~---~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~ 154 (257)
T cd08223 81 FCEGGDLYHKLKEQK---GKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLEN 154 (257)
T ss_pred ccCCCcHHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEecc
Confidence 999999999996532 3468999999999999999999999 8999999999999999999999999999987644
Q ss_pred CCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
... ......+++.|+|||.+.+..++.++||||||++++||++|+.||....... ..... ..+.
T Consensus 155 ~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~------~~~~~-~~~~-------- 218 (257)
T cd08223 155 QCD-MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS------LVYRI-IEGK-------- 218 (257)
T ss_pred cCC-ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH------HHHHH-HhcC--------
Confidence 322 2233468899999999998889999999999999999999999987543211 11111 1111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+...+......+.+++.+|++.+|++||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 219 LPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 111223445678899999999999999999999864
No 181
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4.5e-36 Score=310.69 Aligned_cols=252 Identities=25% Similarity=0.397 Sum_probs=203.9
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCC
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
|+..+.||+|+||.||+|....++..+++|.+........+.+.+|+++++.++|||++++++++...+..++||||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 45678899999999999999888999999999776666678899999999999999999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
++|..++... ...+++..+..++.|+++||.|||+ .+++||||||+||+++.++.+||+|||++....... .
T Consensus 87 ~~l~~~~~~~----~~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~-~ 158 (282)
T cd06643 87 GAVDAVMLEL----ERPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI-Q 158 (282)
T ss_pred CcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccccccccc-c
Confidence 9999987543 3468999999999999999999999 899999999999999999999999999987654321 1
Q ss_pred cceecccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 517 QTTHIVGTLGYLAPELTR-----TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
......++..|+|||++. ...++.++|||||||++|||++|+.||....... ....... . ..+
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~--~~~~~~~-----~-----~~~ 226 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR--VLLKIAK-----S-----EPP 226 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH--HHHHHhh-----c-----CCC
Confidence 223346889999999873 3457789999999999999999999987543211 1111110 0 011
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
.+ ..+......+.+++.+||+.+|.+||++.+++++-
T Consensus 227 ~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 263 (282)
T cd06643 227 TL-AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHP 263 (282)
T ss_pred CC-CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCC
Confidence 11 11122345678899999999999999999998753
No 182
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=4.7e-36 Score=314.95 Aligned_cols=260 Identities=25% Similarity=0.363 Sum_probs=204.9
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
++|+..+.||+|+||.||++....++..+|+|.+... ......++.+|++++.+++||||+++++++..++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 3688899999999999999999888999999998754 333456788999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++... ..+++..+..++.|+++||.|||+. .+++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 81 MDGGSLDQVLKKA-----GRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred cCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 9999999999543 4578899999999999999999972 58999999999999999999999999998765332
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcc--------
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQI-------- 585 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~-------- 585 (662)
......++..|+|||.+.+..++.++|||||||++|||++|+.||....... +..+..........
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 227 (308)
T cd06615 154 ---MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKE---LEAMFGRPVSEGEAKESHRPVS 227 (308)
T ss_pred ---ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhh---HHHhhcCccccccccCCccccc
Confidence 1223468899999999988889999999999999999999999986443211 11111100000000
Q ss_pred -------------------ccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 586 -------------------TRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 586 -------------------~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
.....+.+. .......+.+++.+||+.+|++||++.+|+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~ 288 (308)
T cd06615 228 GHPPDSPRPMAIFELLDYIVNEPPPKLP--SGAFSDEFQDFVDKCLKKNPKERADLKELTKHP 288 (308)
T ss_pred CCCCCccchhhHHHHHHHHhcCCCccCc--CcccCHHHHHHHHHHccCChhhCcCHHHHhcCh
Confidence 000001110 011344688999999999999999999999863
No 183
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.2e-36 Score=320.75 Aligned_cols=256 Identities=23% Similarity=0.277 Sum_probs=200.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|+||+||+++...+++.||+|.+.+.. ......+.+|+.++..++|+||+++++++...+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999998899999999986532 233455788999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++|+|.+++... ...+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 Ey~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 153 (331)
T cd05624 81 DYYVGGDLLTLLSKF----EDRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMN 153 (331)
T ss_pred eCCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeecc
Confidence 999999999999643 2458888999999999999999999 899999999999999999999999999998765
Q ss_pred CCCCCcceecccCCcccCcccccC-----CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccc
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRT-----GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQIT 586 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 586 (662)
...........||+.|+|||++.+ +.++.++|||||||++|||++|+.||........ ......... .
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~------~~~i~~~~~-~ 226 (331)
T cd05624 154 QDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET------YGKIMNHEE-R 226 (331)
T ss_pred CCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHH------HHHHHcCCC-c
Confidence 433223333579999999998865 4678899999999999999999999975432211 111111100 0
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHccCCCCCC--CCCHHHHHHH
Q 040242 587 RAIDPTLDYFDPQEAELVLTLGLLCCDPHPDF--RPSTRRVVQF 628 (662)
Q Consensus 587 ~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~--RPt~~eVl~~ 628 (662)
-.+.+.. ....+.+.+++.+|++.++++ |+++++++++
T Consensus 227 ~~~p~~~----~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 227 FQFPSHI----TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ccCCCcc----ccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 0011111 123456777788888765544 5688888765
No 184
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.6e-36 Score=327.21 Aligned_cols=261 Identities=24% Similarity=0.368 Sum_probs=205.2
Q ss_pred cCCcccceeeeeCceEEEEEEeC-----CCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccc-cccceeeeeeEeccCee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIP-----STGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQDEL 427 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~-----~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~~ 427 (662)
++|...+.||+|+||.||+|.+. ..++.||||++.... ....+.+..|+.++.++. ||||++++++|...+..
T Consensus 37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~ 116 (401)
T cd05107 37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPI 116 (401)
T ss_pred HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCc
Confidence 45777899999999999999863 245689999997653 233457889999999997 99999999999999999
Q ss_pred eEEEeccCCCCcchhcccccc-----------------------------------------------------------
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQ----------------------------------------------------------- 448 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~----------------------------------------------------------- 448 (662)
++||||+++|+|.++++....
T Consensus 117 ~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (401)
T cd05107 117 YIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMK 196 (401)
T ss_pred EEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcch
Confidence 999999999999999965321
Q ss_pred ----------------------------------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeC
Q 040242 449 ----------------------------------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLID 494 (662)
Q Consensus 449 ----------------------------------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 494 (662)
.....++|..++.++.|++.||.|||+ .+++||||||+|||++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiLl~ 273 (401)
T cd05107 197 GTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVLIC 273 (401)
T ss_pred hhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceEEEe
Confidence 011347888899999999999999998 8999999999999999
Q ss_pred CCCCeEEeeccccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHH
Q 040242 495 ADLNPKLGDFGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVL 572 (662)
Q Consensus 495 ~~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l 572 (662)
+++.+||+|||+++....... .......++..|+|||.+....++.++|||||||++|||++ |+.||........ +
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~--~ 351 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ--F 351 (401)
T ss_pred CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH--H
Confidence 999999999999986543221 11223456789999999988889999999999999999998 8889865432211 1
Q ss_pred HHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 573 VDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 573 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
......+. .+. .+......+.+|+.+||+.+|.+||++++|++.|++.
T Consensus 352 ----~~~~~~~~-----~~~---~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~ 399 (401)
T cd05107 352 ----YNAIKRGY-----RMA---KPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDL 399 (401)
T ss_pred ----HHHHHcCC-----CCC---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 11111110 001 1122346788999999999999999999999999764
No 185
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.3e-36 Score=321.71 Aligned_cols=247 Identities=26% Similarity=0.328 Sum_probs=194.1
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHH-HHhhccccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEI-TSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei-~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
+.||+|+||+||+++...++..||+|++.... ......+..|. .+++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999998889999999997542 22233444454 456788999999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|+|.+++... ..++......++.||++||.|||+ .+|+||||||+|||++.++.+||+|||+++..... ..
T Consensus 81 ~~L~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~-~~ 151 (325)
T cd05602 81 GELFYHLQRE-----RCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-NG 151 (325)
T ss_pred CcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCcccccC-CC
Confidence 9999988542 346778888899999999999999 89999999999999999999999999999754322 12
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYF 596 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 596 (662)
......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ....+ .. . .+ ..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i---~~-~--------~~-~~ 215 (325)
T cd05602 152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE---MYDNI---LN-K--------PL-QL 215 (325)
T ss_pred CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHH---HHHHH---Hh-C--------Cc-CC
Confidence 2334579999999999998899999999999999999999999997543221 11111 11 0 00 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 597 DPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 597 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
.......+.+++.+|++.+|.+||++.+.+..+.++
T Consensus 216 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~ 251 (325)
T cd05602 216 KPNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNH 251 (325)
T ss_pred CCCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcC
Confidence 123345678889999999999999987555444443
No 186
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-37 Score=325.63 Aligned_cols=252 Identities=30% Similarity=0.483 Sum_probs=210.2
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCc
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL 439 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 439 (662)
.-+||+|.||+||.|++..+...+|||.+.....+..+-+..||...++|+|+|||+++|.|.+++..-+.||.+|||+|
T Consensus 580 rvVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 580 RVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred eEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 34799999999999999999999999999887777777889999999999999999999999999999999999999999
Q ss_pred chhcccccccccccc--cHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeC-CCCCeEEeeccccccccCCCCC
Q 040242 440 DKLLFDNDQQKKKIL--NWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLID-ADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 440 ~~~l~~~~~~~~~~l--~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~-~~~~~kL~DfGla~~~~~~~~~ 516 (662)
.++|... -.+| ++...-...+||++||.|||+ +.|||||||-+|||++ -.|.+||+|||.++.+. +.++
T Consensus 660 SsLLrsk----WGPlKDNEstm~fYtkQILeGLkYLHe---n~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA-ginP 731 (1226)
T KOG4279|consen 660 SSLLRSK----WGPLKDNESTMNFYTKQILEGLKYLHE---NKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA-GINP 731 (1226)
T ss_pred HHHHHhc----cCCCccchhHHHHHHHHHHHHhhhhhh---cceeeccccCCcEEEeeccceEEecccccchhhc-cCCc
Confidence 9999654 3455 566667788999999999999 8999999999999996 57889999999998765 3567
Q ss_pred cceecccCCcccCcccccCC--CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTG--KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~--~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
.+...-||..|||||++..+ .|..++|||||||.+.||.||++||..-.... .. ++.-| .-.+. .
T Consensus 732 ~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq-AA-------MFkVG--myKvH---P 798 (1226)
T KOG4279|consen 732 CTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ-AA-------MFKVG--MYKVH---P 798 (1226)
T ss_pred cccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh-Hh-------hhhhc--ceecC---C
Confidence 77778899999999999776 48899999999999999999999997433211 00 00001 01112 3
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhcC
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ--FLLRD 632 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~--~L~~~ 632 (662)
..+.+...+...++++|+.+||..||++.++++ +|.-.
T Consensus 799 ~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 799 PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 346677888899999999999999999999997 56433
No 187
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=7.2e-36 Score=310.89 Aligned_cols=253 Identities=25% Similarity=0.414 Sum_probs=205.6
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
+.|+..+.||+|+||.||+|....++..+++|.+........+.+..|+.++++++|+||+++++++..++..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 56788899999999999999998889999999998777777788999999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|..++.+. ...+++..+..++.|++.+|.|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 164 (292)
T cd06644 92 PGGAVDAIMLEL----DRGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL 164 (292)
T ss_pred CCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceeccccc
Confidence 999998887543 3458999999999999999999998 899999999999999999999999999987643321
Q ss_pred CCcceecccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcccccc
Q 040242 515 NPQTTHIVGTLGYLAPELTR-----TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAI 589 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 589 (662)
.......++..|+|||++. ...++.++|||||||++|||++|+.|+....... ... ... +..
T Consensus 165 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~--~~~----~~~------~~~ 231 (292)
T cd06644 165 -QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR--VLL----KIA------KSE 231 (292)
T ss_pred -cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHH--HHH----HHh------cCC
Confidence 1223346788999999884 3446789999999999999999999987543211 111 110 011
Q ss_pred CCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 590 DPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 590 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.+.+ ..+......+.+++.+||+.+|++||++.+++++
T Consensus 232 ~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 232 PPTL-SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CccC-CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 1111 1122334567889999999999999999999874
No 188
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=6.3e-36 Score=304.70 Aligned_cols=252 Identities=21% Similarity=0.348 Sum_probs=208.4
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+|+..+.||.|+||.||.+....++..+++|.+... .....+++.+|+.++++++|+||+++++++...+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 477889999999999999999889999999998654 345567889999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++.... ...+++.++..++.|++++|.|||+ .+++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~ 154 (256)
T cd08221 81 ANGGTLYDKIVRQK---GQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSE 154 (256)
T ss_pred cCCCcHHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEcccc
Confidence 99999999986542 3468999999999999999999999 89999999999999999999999999999876543
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
.. ......+++.|+|||.+.+...+.++||||||+++|||++|+.||....... ..... ..+..
T Consensus 155 ~~-~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------~~~~~-~~~~~-------- 218 (256)
T cd08221 155 YS-MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLN------LVVKI-VQGNY-------- 218 (256)
T ss_pred cc-cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHH------HHHHH-HcCCC--------
Confidence 32 2233568999999999988888999999999999999999999997543221 11111 11111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
..........+.+++.+||+.+|++||++.++++++
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 219 TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 111223455688899999999999999999999763
No 189
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=2.2e-36 Score=319.73 Aligned_cols=242 Identities=23% Similarity=0.314 Sum_probs=195.3
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccc-cccceeeeeeEeccCeeeEEE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lV~ 431 (662)
+|+..+.||+|+||+||++....+++.||+|++.... ....+.+..|..++..+. |++|+++++++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677899999999999999998899999999997642 233456788888888885 577888999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++|+|.+++.. ...+++.++..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 Ey~~~g~L~~~i~~-----~~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~ 152 (323)
T cd05615 81 EYVNGGDLMYHIQQ-----VGKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHM 152 (323)
T ss_pred cCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeccccccccC
Confidence 99999999998843 2458999999999999999999999 899999999999999999999999999987543
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... .+...+. . .. .
T Consensus 153 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~---~~~~~i~---~-~~------~ 218 (323)
T cd05615 153 VDG-VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDED---ELFQSIM---E-HN------V 218 (323)
T ss_pred CCC-ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHH---HHHHHHH---h-CC------C
Confidence 221 1223356899999999998888999999999999999999999999765321 1111111 1 11 0
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPST 622 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 622 (662)
.++......+.+++.+||+.+|.+|++.
T Consensus 219 ---~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 219 ---SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ---CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 1122234567889999999999999974
No 190
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.1e-36 Score=319.15 Aligned_cols=261 Identities=25% Similarity=0.372 Sum_probs=205.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCC-------CCcEEEEEEeecc-chhhHHHHHHHHHHhhcc-ccccceeeeeeEeccC
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPS-------TGLEVAIKRVAHN-SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQD 425 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~-------~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~ 425 (662)
.+|+..+.||+|+||.||++.... .+..||+|.+... .....+++.+|+.+++++ +||||++++++|...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 357888999999999999998632 2236899988754 334467899999999999 7999999999999999
Q ss_pred eeeEEEeccCCCCcchhcccccc-----------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeC
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQ-----------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLID 494 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 494 (662)
..+++|||+++|+|.+++..... .....++|.+++.++.|+++||.|||+ .+++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill~ 168 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVT 168 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEc
Confidence 99999999999999999865321 113458999999999999999999999 8999999999999999
Q ss_pred CCCCeEEeeccccccccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHH
Q 040242 495 ADLNPKLGDFGLARAYDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVL 572 (662)
Q Consensus 495 ~~~~~kL~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l 572 (662)
.++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||.......
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---- 244 (334)
T cd05100 169 EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEE---- 244 (334)
T ss_pred CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHH----
Confidence 9999999999999865432211 1122234568999999988889999999999999999998 888886543211
Q ss_pred HHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 040242 573 VDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDA 633 (662)
Q Consensus 573 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~ 633 (662)
+..... .+. ....+......+.+++.+|++.+|.+||++.|+++.|.+..
T Consensus 245 --~~~~~~-~~~--------~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 245 --LFKLLK-EGH--------RMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred --HHHHHH-cCC--------CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 111111 110 01112233456889999999999999999999999997654
No 191
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.7e-36 Score=305.59 Aligned_cols=251 Identities=23% Similarity=0.383 Sum_probs=206.4
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+|+..+.||+|+||.+|++....++..|++|++... .....+++.+|+.++++++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 477889999999999999999888999999998653 234456889999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++.... ...+++.+++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~ 154 (256)
T cd08218 81 CEGGDLYKKINAQR---GVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNST 154 (256)
T ss_pred CCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCcc
Confidence 99999999886432 2357899999999999999999999 89999999999999999999999999999866443
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
.. ......|++.|+|||.+.+...+.++|||||||+++||++|+.|+....... .+.... .+. .
T Consensus 155 ~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~------~~~~~~-~~~--------~ 218 (256)
T cd08218 155 VE-LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKN------LVLKII-RGS--------Y 218 (256)
T ss_pred hh-hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHH------HHHHHh-cCC--------C
Confidence 21 1223467889999999988889999999999999999999999987543221 111111 111 1
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
...+......+.+++.+||+.+|.+||+|.+|+++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 219 PPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 11122345668899999999999999999999974
No 192
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.5e-36 Score=308.72 Aligned_cols=254 Identities=24% Similarity=0.369 Sum_probs=204.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..+.||+|+||.||+|....+++.||+|.+..........+.+|+.+++.++||||+++++.+...+..++||||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46777889999999999999998889999999997765555667889999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.. ...+++.+.+.++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++.......
T Consensus 89 ~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06645 89 GGGSLQDIYHV-----TGPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI 160 (267)
T ss_pred CCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc
Confidence 99999999853 3458899999999999999999999 899999999999999999999999999987654322
Q ss_pred CCcceecccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 515 NPQTTHIVGTLGYLAPELTR---TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
.......|+..|+|||.+. ...++.++|||||||++|||++|+.|+.......... . ...... ..+
T Consensus 161 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~------~-~~~~~~---~~~ 229 (267)
T cd06645 161 -AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF------L-MTKSNF---QPP 229 (267)
T ss_pred -cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHH------h-hhccCC---CCC
Confidence 1223356899999999874 4557889999999999999999999986543221111 0 000110 011
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.... .......+.+++.+|++.+|++||++.+|+++
T Consensus 230 ~~~~-~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 230 KLKD-KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred cccc-cCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 1110 01123457889999999999999999999864
No 193
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=3e-36 Score=331.47 Aligned_cols=262 Identities=24% Similarity=0.332 Sum_probs=196.1
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEecc--------
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ-------- 424 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~-------- 424 (662)
..++|+..++||+|+||.||+|....+++.||||++..... ...+|+.++++++||||+++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~----~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQ----YKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 34679999999999999999999988899999998855422 234699999999999999999876432
Q ss_pred CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCC-CeEEee
Q 040242 425 DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADL-NPKLGD 503 (662)
Q Consensus 425 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~D 503 (662)
..+++||||++ ++|.+++..... ....+++.....++.||+.||.|||+ .+|+||||||+|||++.++ .+||+|
T Consensus 140 ~~l~lvmE~~~-~~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 140 IFLNVVMEFIP-QTVHKYMKHYAR-NNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred eEEEEEEecCC-ccHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeec
Confidence 24679999997 477776643211 14568999999999999999999999 8999999999999999765 699999
Q ss_pred ccccccccCCCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhc
Q 040242 504 FGLARAYDHNINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQ 582 (662)
Q Consensus 504 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 582 (662)
||+++.+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.......... ..+. ....
T Consensus 215 FGla~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~--~i~~-~~~~ 289 (440)
T PTZ00036 215 FGSAKNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLV--RIIQ-VLGT 289 (440)
T ss_pred cccchhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH--HHHH-HhCC
Confidence 99998764332 2223568999999998765 468999999999999999999999997654332211 1111 0000
Q ss_pred ----------CccccccCCC-----C-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 583 ----------GQITRAIDPT-----L-DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 583 ----------~~~~~~id~~-----l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
....+..-+. + ..++......+.+|+.+||+.||.+|||+.|++++
T Consensus 290 p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 290 PTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred CCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0000000011 1 11122234678899999999999999999999964
No 194
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=4.7e-36 Score=312.97 Aligned_cols=266 Identities=24% Similarity=0.379 Sum_probs=204.9
Q ss_pred cCCcccceeeeeCceEEEEEEeC----------------CCCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIP----------------STGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQL 417 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~----------------~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l 417 (662)
++|+..++||+|+||.||++... .++..||+|.+... ......+|.+|+.++++++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56888999999999999998542 23456999999754 33445789999999999999999999
Q ss_pred eeeEeccCeeeEEEeccCCCCcchhccccccc------ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCce
Q 040242 418 HGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQ------KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNV 491 (662)
Q Consensus 418 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NI 491 (662)
++++...+..++||||+++++|.+++...... ....+++.+.+.++.|++.||.|||+ .+++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChheE
Confidence 99999999999999999999999998654311 12358889999999999999999999 8999999999999
Q ss_pred EeCCCCCeEEeeccccccccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc--CCCCCCcccchh
Q 040242 492 LIDADLNPKLGDFGLARAYDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC--GRRPIEPQRTAM 568 (662)
Q Consensus 492 ll~~~~~~kL~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt--G~~p~~~~~~~~ 568 (662)
+++.++.++|+|||+++.+...... ......++..|++||....+.++.++|||||||++|||++ |..||.......
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~ 241 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQ 241 (296)
T ss_pred EEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHH
Confidence 9999999999999999865432211 1222344678999998888889999999999999999998 667876443221
Q ss_pred hHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 569 ELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 569 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
........+..... ....+. +..+...+.+++.+||+.||.+||++.+|++.|++
T Consensus 242 ---~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 242 ---VIENTGEFFRDQGR-QVYLPK----PALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred ---HHHHHHHHHhhccc-cccCCC----CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 11111111111110 011111 12234678899999999999999999999998863
No 195
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=5.4e-36 Score=305.63 Aligned_cols=248 Identities=28% Similarity=0.447 Sum_probs=199.5
Q ss_pred ceeeeeCceEEEEEEeCCCC---cEEEEEEeeccch-hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTG---LEVAIKRVAHNSR-QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g---~~vavK~~~~~~~-~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
++||+|+||.||+|+....+ ..+|+|.+..... ...+++.+|+.+++++.|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46999999999999875544 7899999876543 34567899999999999999999999876 4568999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
++|.+++... ..+++..++.++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~ 151 (257)
T cd05060 80 GPLLKYLKKR-----REIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY 151 (257)
T ss_pred CcHHHHHHhC-----CCCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecCCcc
Confidence 9999999543 368999999999999999999998 89999999999999999999999999999876543322
Q ss_pred cc--eecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 517 QT--THIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 517 ~~--~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
.. ....++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .+..++.+ +..
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~---~~~~~~~~----~~~-------- 216 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGA---EVIAMLES----GER-------- 216 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHH---HHHHHHHc----CCc--------
Confidence 11 11223568999999988889999999999999999998 99998754321 22222221 110
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
...+...+..+.+++.+||..+|++||++.++++.|++.
T Consensus 217 ~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 217 LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 011223346788999999999999999999999999875
No 196
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4e-36 Score=309.11 Aligned_cols=252 Identities=28% Similarity=0.450 Sum_probs=198.3
Q ss_pred ceeeeeCceEEEEEEeCCCCc--EEEEEEeecc-chhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGL--EVAIKRVAHN-SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~--~vavK~~~~~-~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
++||+|+||.||+|.+.+++. .+++|.+... .....+.+..|++++.++ +||||++++++|...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 469999999999999977665 4688888653 344556789999999999 799999999999999999999999999
Q ss_pred CCcchhcccccc-----------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecc
Q 040242 437 GSLDKLLFDNDQ-----------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFG 505 (662)
Q Consensus 437 gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 505 (662)
|+|.+++..... .....+++.+++.++.|++.||+|||+ .+++||||||+||++++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCC
Confidence 999999865321 112358899999999999999999998 899999999999999999999999999
Q ss_pred ccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCc
Q 040242 506 LARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQ 584 (662)
Q Consensus 506 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~ 584 (662)
++...... ........+..|+|||++....++.++|||||||++|||++ |+.||....... ..... ..+.
T Consensus 158 l~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~------~~~~~-~~~~ 228 (270)
T cd05047 158 LSRGQEVY--VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE------LYEKL-PQGY 228 (270)
T ss_pred Cccccchh--hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH------HHHHH-hCCC
Confidence 98643221 11111234567999999988889999999999999999997 999986543211 11111 1110
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 585 ITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 585 ~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
.. .........+.+++.+|++.+|.+||++.++++.|.+.
T Consensus 229 -------~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~ 268 (270)
T cd05047 229 -------RL-EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268 (270)
T ss_pred -------CC-CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHh
Confidence 00 11122345678999999999999999999999998754
No 197
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.3e-36 Score=311.60 Aligned_cols=264 Identities=27% Similarity=0.362 Sum_probs=196.9
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhcc---ccccceeeeeeEecc-----C
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRL---RHRNLVQLHGWCRKQ-----D 425 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l---~H~niv~l~~~~~~~-----~ 425 (662)
+|+..+.||+|+||+||+|....+++.||+|.+.... ......+.+|+.+++++ +||||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4778899999999999999999899999999986532 12223455676666655 799999999988642 3
Q ss_pred eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecc
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFG 505 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 505 (662)
..++||||++ ++|.+++.... ...+++.++..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVP---PPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccC
Confidence 5799999997 58888885432 3458999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH-HHHHHH----HHh
Q 040242 506 LARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV-LVDWVR----ELH 580 (662)
Q Consensus 506 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~~----~~~ 580 (662)
+++...... ......|+..|+|||.+.+..++.++||||+||++|||++|++||.......... +..+.. ..+
T Consensus 154 ~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 154 LARIYSCQM--ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 231 (288)
T ss_pred ccccccCcc--cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhC
Confidence 998764322 2233568899999999988889999999999999999999999997543322111 111100 000
Q ss_pred hc-Ccc-ccccCCC----CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 581 SQ-GQI-TRAIDPT----LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 581 ~~-~~~-~~~id~~----l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.. ... .....+. +....+...+.+.+++.+||+.||++||++.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 232 PRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred cccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 000 0001110 011122345667899999999999999999999864
No 198
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2e-36 Score=313.71 Aligned_cols=261 Identities=25% Similarity=0.400 Sum_probs=203.4
Q ss_pred cCCcccceeeeeCceEEEEEEe----CCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEecc--Cee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVI----PSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ--DEL 427 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~----~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~--~~~ 427 (662)
+-|+..+.||+|+||.||++.. ..++..||+|.+.... ......+.+|+.++++++||||+++.+++... ...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3467789999999999999974 3467889999987553 34456789999999999999999999998775 568
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccc
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLA 507 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla 507 (662)
++||||+++++|.+++... ...++|.+++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 84 ~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~dfg~~ 156 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPRN----KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFGLT 156 (284)
T ss_pred EEEEEccCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEECCCccc
Confidence 9999999999999998543 2358999999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCC--cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccch---------hhHHHHHHH
Q 040242 508 RAYDHNINP--QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTA---------MELVLVDWV 576 (662)
Q Consensus 508 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~---------~~~~l~~~~ 576 (662)
+........ ......++..|+|||.+.+..++.++|||||||++|||++++.|....... .+.....++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05079 157 KAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLV 236 (284)
T ss_pred cccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHH
Confidence 876543221 112345677899999998888999999999999999999987765321110 000111111
Q ss_pred HHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 577 RELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 577 ~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
.....+.. ..........+.+|+.+||+.+|++||++.++++.|+.
T Consensus 237 -~~~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 237 -RVLEEGKR--------LPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred -HHHHcCcc--------CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 11111110 11122345678999999999999999999999999875
No 199
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.1e-36 Score=311.04 Aligned_cols=248 Identities=26% Similarity=0.409 Sum_probs=203.8
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
.|+..+.||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+.++++++||||+++++++..+...++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3566788999999999999998888999999987543 344567899999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.. ..+++..+..++.|+++||.|||+ .+++|+||+|+||++++++.++|+|||++.......
T Consensus 85 ~~~~L~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06642 85 GGGSALDLLKP------GPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEccccccccccCcc
Confidence 99999998842 358899999999999999999999 899999999999999999999999999998654332
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
.......++..|+|||++.+..++.++|||||||++|||++|+.|+........ ..+ .. +...+.
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~---~~~----~~-----~~~~~~-- 220 (277)
T cd06642 156 -IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV---LFL----IP-----KNSPPT-- 220 (277)
T ss_pred -hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH---Hhh----hh-----cCCCCC--
Confidence 122234678899999999888899999999999999999999999864432111 000 00 111111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
........+.+++.+|++.+|++||+|.+|+++
T Consensus 221 -~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 221 -LEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred -CCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 222345668899999999999999999999985
No 200
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=8.4e-36 Score=306.46 Aligned_cols=256 Identities=26% Similarity=0.393 Sum_probs=194.3
Q ss_pred ceeeeeCceEEEEEEeCC--CCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCC
Q 040242 361 NLVGSGGFGKVYRGVIPS--TGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG 437 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~--~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 437 (662)
+.||+|+||.||+|.... ++..+++|.+.... ......+.+|+.++++++||||+++++++......++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998643 34679999886643 334457889999999999999999999999999999999999999
Q ss_pred CcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC-C
Q 040242 438 SLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN-P 516 (662)
Q Consensus 438 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~-~ 516 (662)
+|.+++..........+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++....... .
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999965432223456778888999999999999999 8999999999999999999999999999875433211 1
Q ss_pred cceecccCCcccCcccccCC-------CCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccc
Q 040242 517 QTTHIVGTLGYLAPELTRTG-------KATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRA 588 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~-------~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 588 (662)
......++..|+|||++... .++.++||||||+++|||++ |+.||.......... .. ..+.....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~---~~----~~~~~~~~ 230 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLT---YT----VREQQLKL 230 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHH---HH----hhcccCCC
Confidence 12234577889999988532 35789999999999999996 999997543322111 10 01111122
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 589 IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 589 id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
.++.+. ....+.+.+++..|+ .+|++||++.||++.|+
T Consensus 231 ~~~~~~---~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRLK---LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCccC---CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 222221 122344677888998 68999999999999875
No 201
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=7e-36 Score=307.81 Aligned_cols=250 Identities=25% Similarity=0.393 Sum_probs=206.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
++|+..+.||.|++|.||+|....++..||+|.+.... ......+.+|+.++++++|+|++++++++......++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 35778899999999999999998889999999987653 34456788999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++.. ..+++..++.++.|++.||.|||+ .+++|+||+|+||++++++.++|+|||+++.....
T Consensus 81 ~~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~ 151 (274)
T cd06609 81 CGGGSCLDLLKP------GKLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTST 151 (274)
T ss_pred eCCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeeccc
Confidence 999999999853 268999999999999999999999 89999999999999999999999999999876543
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
. .......++..|+|||++.+..++.++|||||||++|||++|+.||........ ... .. ....+.+
T Consensus 152 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~------~~~-~~-----~~~~~~~ 218 (274)
T cd06609 152 M-SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRV------LFL-IP-----KNNPPSL 218 (274)
T ss_pred c-cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHH------HHH-hh-----hcCCCCC
Confidence 2 222334678899999999888899999999999999999999999975432110 111 00 1111222
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
... .....+.+++.+||+.+|++||++++++++
T Consensus 219 ~~~--~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 219 EGN--KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred ccc--ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 111 144567889999999999999999999874
No 202
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=8.2e-36 Score=303.75 Aligned_cols=252 Identities=29% Similarity=0.475 Sum_probs=205.5
Q ss_pred ceeeeeCceEEEEEEeCCC---CcEEEEEEeeccchh-hHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPST---GLEVAIKRVAHNSRQ-GMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~---g~~vavK~~~~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
+.||+|+||.||+|..... +..|++|.+...... ..+.+.+|++.+++++|+|++++++++......++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 4699999999999999765 889999999765433 367889999999999999999999999999999999999999
Q ss_pred CCcchhccccccc----ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 437 GSLDKLLFDNDQQ----KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 437 gsL~~~l~~~~~~----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
++|.+++...... ....+++.+++.++.|+++||.|||+ .+++|+||||+||+++.++.+||+|||.+.....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999654211 02568999999999999999999999 8999999999999999999999999999987654
Q ss_pred CCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 513 NIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 513 ~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
... .......++..|+|||.+....++.++||||+|++++||++ |+.||...... .+.+.+ ..+
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~---~~~~~~----~~~------- 223 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNE---EVLEYL----RKG------- 223 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHH---HHHHHH----HcC-------
Confidence 321 12233457889999999988889999999999999999999 68998765321 111111 111
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
.....+......+.+++.+|++.+|++||++.|++++|+
T Consensus 224 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 224 -YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred -CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 011112233567889999999999999999999999874
No 203
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3.2e-36 Score=319.68 Aligned_cols=256 Identities=23% Similarity=0.263 Sum_probs=198.9
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..++||+|+||.||+++...+++.+|+|.+.+.. ......+..|+.++..++|+||+++++++...+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46888999999999999999998889999999986532 223445788999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++|+|.+++.+. ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++....
T Consensus 81 ey~~~g~L~~~l~~~----~~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~ 153 (332)
T cd05623 81 DYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 153 (332)
T ss_pred eccCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecc
Confidence 999999999999643 3458899999999999999999999 899999999999999999999999999997654
Q ss_pred CCCCCcceecccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccc
Q 040242 512 HNINPQTTHIVGTLGYLAPELTR-----TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQIT 586 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 586 (662)
...........||+.|+|||++. ...++.++|||||||++|||++|+.||....... .......... .
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~------~~~~i~~~~~-~ 226 (332)
T cd05623 154 EDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE------TYGKIMNHKE-R 226 (332)
T ss_pred cCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHH------HHHHHhCCCc-c
Confidence 33222333457999999999885 3467889999999999999999999997543221 1111111100 0
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHccCC--CCCCCCCHHHHHHH
Q 040242 587 RAIDPTLDYFDPQEAELVLTLGLLCCDP--HPDFRPSTRRVVQF 628 (662)
Q Consensus 587 ~~id~~l~~~~~~~~~~l~~l~~~Cl~~--dP~~RPt~~eVl~~ 628 (662)
..+... .......+.+++.+|+.. ++..||++.|++++
T Consensus 227 ~~~p~~----~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 227 FQFPAQ----VTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ccCCCc----cccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 001111 112344566677777754 44447899999876
No 204
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=6e-36 Score=305.99 Aligned_cols=253 Identities=25% Similarity=0.437 Sum_probs=204.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..+.||+|+||.||++... .+..+++|.+.... ...+.+.+|+.++++++|+||+++.+.+.. ...+++|||+
T Consensus 6 ~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 6 ESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred cceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 56888999999999999999874 45679999886543 345678999999999999999999999887 7789999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.... ...+++.+++.++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 83 AKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred CCCcHHHHHHhCC---ccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence 9999999996532 3468899999999999999999998 899999999999999999999999999998665432
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
........++..|+|||++..+.++.++|||||||++||+++ |+.||...... .+..++ ..+... +
T Consensus 157 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~---~~~~~~----~~~~~~----~-- 223 (260)
T cd05073 157 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP---EVIRAL----ERGYRM----P-- 223 (260)
T ss_pred cccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHH---HHHHHH----hCCCCC----C--
Confidence 222223345678999999988889999999999999999999 89998754322 111111 111100 1
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
........+.+++.+|++.+|++||++.++.+.|+.
T Consensus 224 --~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 224 --RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred --CcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 112334568899999999999999999999999874
No 205
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=8.9e-36 Score=305.41 Aligned_cols=241 Identities=24% Similarity=0.395 Sum_probs=191.3
Q ss_pred ceeeeeCceEEEEEEeCCC------------CcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeee
Q 040242 361 NLVGSGGFGKVYRGVIPST------------GLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELL 428 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~------------g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 428 (662)
+.||+|+||.||+|+.... ...|++|.+..........|.+|+.+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 4689999999999986322 2358999887665556678899999999999999999999999999999
Q ss_pred EEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCC-------eEE
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLN-------PKL 501 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-------~kL 501 (662)
+||||+++++|..++... ...+++..++.++.||++||.|||+ .+|+||||||+|||++.++. +++
T Consensus 81 lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRK----SDVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEEecccCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCceeEe
Confidence 999999999999988543 3458999999999999999999999 89999999999999987664 899
Q ss_pred eeccccccccCCCCCcceecccCCcccCccccc-CCCCCcchhHHHHHHHHHHHH-cCCCCCCcccchhhHHHHHHHHHH
Q 040242 502 GDFGLARAYDHNINPQTTHIVGTLGYLAPELTR-TGKATTSTDVFGFGTLMLEVA-CGRRPIEPQRTAMELVLVDWVREL 579 (662)
Q Consensus 502 ~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDV~S~Gvvl~ell-tG~~p~~~~~~~~~~~l~~~~~~~ 579 (662)
+|||++...... ....++..|+|||.+. +..++.++|||||||++|||+ +|+.|+.......... .
T Consensus 154 ~d~g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~-------~ 221 (262)
T cd05077 154 SDPGIPITVLSR-----QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKER-------F 221 (262)
T ss_pred CCCCCCccccCc-----ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHH-------H
Confidence 999998754322 2245788999999886 456889999999999999998 5888876432211110 0
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 580 HSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 580 ~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
. .+.. .. .......+.+|+.+||+.||.+||++.+|++.|+
T Consensus 222 ~-~~~~------~~---~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~~ 262 (262)
T cd05077 222 Y-EGQC------ML---VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDIN 262 (262)
T ss_pred H-hcCc------cC---CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhcC
Confidence 0 1100 01 1112356789999999999999999999998763
No 206
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.6e-36 Score=321.92 Aligned_cols=263 Identities=22% Similarity=0.277 Sum_probs=201.2
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEecc------
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ------ 424 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~------ 424 (662)
..++|+..+.||+|+||.||+++....++.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 357899999999999999999999888999999998653 234456788999999999999999999987543
Q ss_pred CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 425 DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 425 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
...++||||++ ++|.+.+ ...+++..+..++.|+++||.|||+ .+|+||||||+||+++.++.+||+||
T Consensus 102 ~~~~lv~e~~~-~~l~~~~-------~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Df 170 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVI-------QMELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 170 (364)
T ss_pred CeEEEEEeCCC-CCHHHHH-------HhcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcEEEEeC
Confidence 35799999996 4777766 2347888999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHH---------HH
Q 040242 505 GLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLV---------DW 575 (662)
Q Consensus 505 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~---------~~ 575 (662)
|+++...... ......+|..|+|||++.+..++.++|||||||++|||++|+.||..........-. ++
T Consensus 171 G~a~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 248 (364)
T cd07875 171 GLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 248 (364)
T ss_pred CCccccCCCC--cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 9998654322 223356899999999999889999999999999999999999999765432211100 00
Q ss_pred H-------HHHhhcC-ccc----cccCCCC-----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 576 V-------RELHSQG-QIT----RAIDPTL-----DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 576 ~-------~~~~~~~-~~~----~~id~~l-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
. ....... ... +.+.+.. ..........+.+++.+|++.||.+|||+.|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 249 MKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 0000000 000 0000000 01111234567899999999999999999999985
No 207
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=5.2e-36 Score=313.41 Aligned_cols=262 Identities=25% Similarity=0.352 Sum_probs=201.6
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
++|...+.||+|+||.||+|....++..||+|.+.... ......+.+|+.++++++|+||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46888999999999999999998889999999986543 23345678899999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
++ ++|.+++... ...+++.....++.|+++||.|||+ .+++|+||||+||+++.++.+||+|||++......
T Consensus 86 ~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 86 LD-KDLKQYLDDC----GNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred cc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 96 6888888543 3457899999999999999999999 89999999999999999999999999999865432
Q ss_pred CCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHh------------
Q 040242 514 INPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELH------------ 580 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~------------ 580 (662)
.. ......+++.|+|||.+.+. .++.++|||||||++|||++|+.||.......... .+....
T Consensus 158 ~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 233 (301)
T cd07873 158 TK-TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLH---FIFRILGTPTEETWPGIL 233 (301)
T ss_pred CC-cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HHHHHcCCCChhhchhhh
Confidence 21 12223568899999987653 57889999999999999999999997654322211 111110
Q ss_pred hcCccccccCCCC-----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 581 SQGQITRAIDPTL-----DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 581 ~~~~~~~~id~~l-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
........-.+.. ..........+.+|+.+|++.||.+|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000000000110 00111234567889999999999999999999973
No 208
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5.1e-36 Score=310.68 Aligned_cols=266 Identities=23% Similarity=0.312 Sum_probs=208.4
Q ss_pred cchHHHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcc-ccccceeeeeeEe-
Q 040242 345 FRYSELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRL-RHRNLVQLHGWCR- 422 (662)
Q Consensus 345 ~~~~el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~- 422 (662)
+.++.+..++++|+..+.||+|+||.||++....+++.+|+|.+.... ....++.+|+.+++++ +|+||+++++++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 455677788899999999999999999999998889999999886532 2235678899999999 6999999999884
Q ss_pred ----ccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCC
Q 040242 423 ----KQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLN 498 (662)
Q Consensus 423 ----~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 498 (662)
.++..++||||+++++|.+++..... ....+++..+..++.|+++||.|||+ .+++||||||+||+++.++.
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~ 162 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLK-RGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILLTTEGG 162 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhc-cCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEECCCCC
Confidence 34568999999999999998754321 13568899999999999999999999 89999999999999999999
Q ss_pred eEEeeccccccccCCCCCcceecccCCcccCcccccC-----CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHH
Q 040242 499 PKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRT-----GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLV 573 (662)
Q Consensus 499 ~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~ 573 (662)
+||+|||+++...... .......|+..|+|||++.. ..++.++||||+||++|||++|+.|+......... .
T Consensus 163 ~kl~dfg~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~--~ 239 (286)
T cd06638 163 VKLVDFGVSAQLTSTR-LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRAL--F 239 (286)
T ss_pred EEEccCCceeecccCC-CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHH--h
Confidence 9999999998664322 22233468999999998753 34788999999999999999999998754321110 0
Q ss_pred HHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 574 DWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 574 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
.. .....+.+. .+......+..++.+||+.+|++||++.|+++++
T Consensus 240 ~~----------~~~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 240 KI----------PRNPPPTLH-QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred hc----------cccCCCccc-CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 00 000111110 1111234688899999999999999999999864
No 209
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=4.8e-36 Score=305.58 Aligned_cols=252 Identities=27% Similarity=0.448 Sum_probs=202.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
.+|+..+.||+|++|.||++.+. .+..+|+|.+..... ...+|.+|++++++++|||++++++++......++||||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 45777899999999999999885 467899998865432 3457899999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++... ...+++..++.++.|++.+|.|||+ .+++|+||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 154 (256)
T cd05112 82 EHGCLSDYLRAQ----RGKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQ 154 (256)
T ss_pred CCCcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCc
Confidence 999999998543 3458899999999999999999999 899999999999999999999999999998654332
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
........++.+|+|||.+.++.++.++||||||+++|||++ |+.||...... . .+... .++ .....+.
T Consensus 155 ~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~---~~~~~-~~~--~~~~~~~- 224 (256)
T cd05112 155 YTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS---E---VVETI-NAG--FRLYKPR- 224 (256)
T ss_pred ccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH---H---HHHHH-hCC--CCCCCCC-
Confidence 211222335678999999988889999999999999999998 89998754321 1 11111 111 0111121
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
.....+.+|+.+||+.+|++||++.+|+++|.
T Consensus 225 -----~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 225 -----LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred -----CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 13467889999999999999999999999874
No 210
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=5.2e-36 Score=309.80 Aligned_cols=254 Identities=25% Similarity=0.400 Sum_probs=207.1
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
.++|+..+.||.|++|.||++....++..+|+|.+........+.|..|++++++++|+||+++++.+..+...++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 45688899999999999999999888999999999877666778899999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++... ...+++.....++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||++......
T Consensus 84 ~~~~~L~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 156 (280)
T cd06611 84 CDGGALDSIMLEL----ERGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKST 156 (280)
T ss_pred cCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhccc
Confidence 9999999998543 3468999999999999999999999 89999999999999999999999999988765432
Q ss_pred CCCcceecccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccc
Q 040242 514 INPQTTHIVGTLGYLAPELTR-----TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRA 588 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 588 (662)
. .......++..|+|||.+. ...++.++||||||+++|||++|+.||....... .+..+ ..+
T Consensus 157 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~--~~~~~-----~~~----- 223 (280)
T cd06611 157 L-QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMR--VLLKI-----LKS----- 223 (280)
T ss_pred c-cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHH--HHHHH-----hcC-----
Confidence 2 2223356899999999874 3346789999999999999999999997543221 11111 011
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 589 IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 589 id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
..+.+ ..+......+.+++.+||+.+|++||++.+|+++
T Consensus 224 ~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 224 EPPTL-DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CCCCc-CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 01111 1122334567889999999999999999999875
No 211
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=6.8e-36 Score=342.27 Aligned_cols=261 Identities=23% Similarity=0.299 Sum_probs=205.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..++||+|+||.||+|.+..+++.||+|++... .....++|.+|++++++++||||+++++++..++..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 5788899999999999999999888999999998653 2334567999999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccc------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecc
Q 040242 432 DYVPNGSLDKLLFDNDQ------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFG 505 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 505 (662)
||+++++|.+++..... .....+++..+++++.||++||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecC
Confidence 99999999999864211 112346788889999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCC-----------------CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchh
Q 040242 506 LARAYDHNIN-----------------PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAM 568 (662)
Q Consensus 506 la~~~~~~~~-----------------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~ 568 (662)
+++....... .......||+.|+|||.+.+..++.++|||||||++|||+||+.||.......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k 238 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK 238 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh
Confidence 9986621110 01122469999999999998899999999999999999999999997533211
Q ss_pred hHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCC-CHHHHHHHHhc
Q 040242 569 ELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRP-STRRVVQFLLR 631 (662)
Q Consensus 569 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-t~~eVl~~L~~ 631 (662)
. .. . .. ..++.-.......+..+.+++.+|++.||++|| +++++++.|+.
T Consensus 239 i-~~----~-----~~---i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~ 289 (932)
T PRK13184 239 I-SY----R-----DV---ILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEP 289 (932)
T ss_pred h-hh----h-----hh---ccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 0 00 0 00 011110000123345678899999999999996 56666666654
No 212
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.9e-36 Score=308.86 Aligned_cols=240 Identities=25% Similarity=0.365 Sum_probs=189.9
Q ss_pred eeeeeCceEEEEEEeCC------------------------CCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceee
Q 040242 362 LVGSGGFGKVYRGVIPS------------------------TGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQL 417 (662)
Q Consensus 362 ~LG~G~~g~Vy~~~~~~------------------------~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l 417 (662)
.||+|+||.||+|.... ....|++|.+..........|.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 59999999999998532 124589999876655556788999999999999999999
Q ss_pred eeeEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCC
Q 040242 418 HGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADL 497 (662)
Q Consensus 418 ~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~ 497 (662)
+++|......++||||+++|+|..++... ...+++..++.++.|+++||+|||+ .+|+||||||+||+++..+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE----KGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNILLARLG 154 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEEEeccC
Confidence 99999999999999999999999998543 3468899999999999999999998 8999999999999997654
Q ss_pred -------CeEEeeccccccccCCCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHH-cCCCCCCcccchh
Q 040242 498 -------NPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVA-CGRRPIEPQRTAM 568 (662)
Q Consensus 498 -------~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~ell-tG~~p~~~~~~~~ 568 (662)
.+|++|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||.......
T Consensus 155 ~~~~~~~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 155 LAEGTSPFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred cccCccceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 3799999988643221 12356788999998865 56899999999999999995 6899987543321
Q ss_pred hHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 569 ELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 569 ~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
.. .+.. .. ..+ +......+.+++.+||+.+|++||++.+|++.|.
T Consensus 230 ~~---~~~~----~~-------~~~---~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~ 274 (274)
T cd05076 230 KE---RFYE----KK-------HRL---PEPSCKELATLISQCLTYEPTQRPSFRTILRDLT 274 (274)
T ss_pred HH---HHHH----hc-------cCC---CCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence 11 1111 00 011 0111235788999999999999999999999874
No 213
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.8e-36 Score=308.92 Aligned_cols=257 Identities=25% Similarity=0.382 Sum_probs=207.6
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
++|+..+.||+|++|+||++....++..||+|++.... ....+.+.+|+++++.++||||+++++++......++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 45777899999999999999998889999999886543 34467889999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++.. ...+++.....++.+++.+|.|||+. .+++||||||+||+++.++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 85 MDCGSLDRIYKK-----GGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred CCCCCHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 999999998843 24589999999999999999999973 57999999999999999999999999998754322
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccch-----hhHHHHHHHHHHhhcCccccc
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTA-----MELVLVDWVRELHSQGQITRA 588 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~-----~~~~l~~~~~~~~~~~~~~~~ 588 (662)
. .....|+..|+|||++.++.++.++|||||||++|||++|+.||...... ....+.+++.......
T Consensus 158 ~---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 229 (284)
T cd06620 158 I---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP----- 229 (284)
T ss_pred c---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-----
Confidence 1 22346899999999998888999999999999999999999999754331 1111222322221110
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 589 IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 589 id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
.+.+. .......+.+++.+|++.||++||++.|++++.
T Consensus 230 -~~~~~--~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 230 -PPRLP--SSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred -CCCCC--chhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 11111 112445688999999999999999999999864
No 214
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=5.9e-36 Score=309.93 Aligned_cols=264 Identities=28% Similarity=0.374 Sum_probs=201.0
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+|+..+.||+|++|.||+|+...++..||+|++.... ....+.+.+|+.++++++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4777899999999999999998889999999986542 22346788999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
++ ++|.+++..... ...+++.++..++.|+++||.|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~-~~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 81 LS-MDLKKYLDSLPK--GQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP 154 (285)
T ss_pred CC-CCHHHHHhcCCC--CCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCC
Confidence 96 688888754321 3568999999999999999999999 89999999999999999999999999999865433
Q ss_pred CCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHH-------hhc---
Q 040242 514 INPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVREL-------HSQ--- 582 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~-------~~~--- 582 (662)
.. ......+++.|+|||.+.+. .++.++|||||||+++||+||+.||.......... ...... +..
T Consensus 155 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd07861 155 VR-VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLF--RIFRILGTPTEDVWPGVTS 231 (285)
T ss_pred cc-cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH--HHHHHhCCCChhhhhcchh
Confidence 21 12233568899999987654 47889999999999999999999997553321111 000000 000
Q ss_pred -Ccccccc----CCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 583 -GQITRAI----DPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 583 -~~~~~~i----d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
....... ...+..........+.+++.+||+.||++|||+.+|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 232 LPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred hHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000000 000111111234567789999999999999999999864
No 215
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.5e-36 Score=313.69 Aligned_cols=262 Identities=24% Similarity=0.384 Sum_probs=206.6
Q ss_pred cCCcccceeeeeCceEEEEEEeC-------CCCcEEEEEEeecc-chhhHHHHHHHHHHhhcc-ccccceeeeeeEeccC
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIP-------STGLEVAIKRVAHN-SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQD 425 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~-------~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~ 425 (662)
.+|...+.||+|+||.||+++.. ..+..||+|.+... .....+++.+|+.+++.+ +||||+++++++...+
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 94 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 94 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC
Confidence 56778899999999999999752 23457999988654 234557889999999999 8999999999999999
Q ss_pred eeeEEEeccCCCCcchhccccccc-----------ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeC
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQQ-----------KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLID 494 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 494 (662)
..++||||+++|+|.+++...... ....++|.+++.++.|+++||.|||+ .+++||||||+||+++
T Consensus 95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nili~ 171 (304)
T cd05101 95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVLVT 171 (304)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEEEc
Confidence 999999999999999999754211 12458899999999999999999999 8999999999999999
Q ss_pred CCCCeEEeeccccccccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHH
Q 040242 495 ADLNPKLGDFGLARAYDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVL 572 (662)
Q Consensus 495 ~~~~~kL~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l 572 (662)
.++.+||+|||+++........ ......++..|+|||.+.+..++.++||||||+++|||++ |..|+......
T Consensus 172 ~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----- 246 (304)
T cd05101 172 ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE----- 246 (304)
T ss_pred CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-----
Confidence 9999999999999876543221 1222345678999999988889999999999999999998 77887643221
Q ss_pred HHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 040242 573 VDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDAS 634 (662)
Q Consensus 573 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~ 634 (662)
++.... ..+.. ...+......+.+++.+||+.+|++||++.||++.|.+...
T Consensus 247 -~~~~~~-~~~~~--------~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~ 298 (304)
T cd05101 247 -ELFKLL-KEGHR--------MDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILT 298 (304)
T ss_pred -HHHHHH-HcCCc--------CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHH
Confidence 111111 11110 01122345668889999999999999999999999977543
No 216
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1e-35 Score=304.21 Aligned_cols=250 Identities=25% Similarity=0.403 Sum_probs=193.6
Q ss_pred ceeeeeCceEEEEEEeCC---CCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEe-ccCeeeEEEeccC
Q 040242 361 NLVGSGGFGKVYRGVIPS---TGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCR-KQDELLLVYDYVP 435 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~---~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~-~~~~~~lV~E~~~ 435 (662)
+.||+|+||.||+|++.. .+..||+|++... .....+.+..|+.+++.++||||++++++|. .++..++|+||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 468999999999998743 3457999998543 3445678899999999999999999999876 4556899999999
Q ss_pred CCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC
Q 040242 436 NGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN 515 (662)
Q Consensus 436 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~ 515 (662)
+++|.+++... ...+++..++.++.|+++||.|||+ .+++||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~ 153 (262)
T cd05058 81 HGDLRNFIRSE----THNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEY 153 (262)
T ss_pred CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCccccccccCCcc
Confidence 99999999643 2346778889999999999999999 8999999999999999999999999999986533211
Q ss_pred ---CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCC-CCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 516 ---PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGR-RPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 516 ---~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~-~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
.......++..|+|||.+.+..++.++|||||||++|||++|+ .|+...... .+...+. .+. .+
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~---~~~~~~~----~~~-----~~ 221 (262)
T cd05058 154 YSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF---DITVYLL----QGR-----RL 221 (262)
T ss_pred eeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH---HHHHHHh----cCC-----CC
Confidence 1112234577899999998888999999999999999999964 555433211 1111111 110 01
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
. .+...+..+.+++.+||+.+|++||++.+|++.|++.
T Consensus 222 ~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 222 L---QPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred C---CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 1 1112345688999999999999999999999998753
No 217
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4e-36 Score=315.29 Aligned_cols=260 Identities=24% Similarity=0.373 Sum_probs=204.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCC-------CCcEEEEEEeecc-chhhHHHHHHHHHHhhcc-ccccceeeeeeEeccC
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPS-------TGLEVAIKRVAHN-SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQD 425 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~-------~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~ 425 (662)
++|...+.||+|+||.||++.... ....+|+|.+... ......++..|+.++.++ +|+||++++++|...+
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 97 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 568889999999999999998643 2346999999754 234456788999999999 7999999999999999
Q ss_pred eeeEEEeccCCCCcchhccccccc-----------ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeC
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQQ-----------KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLID 494 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 494 (662)
..++||||+++|+|.+++...... ....++|.++++++.|++.||+|||+ .+++||||||+||+++
T Consensus 98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~ 174 (307)
T cd05098 98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVT 174 (307)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEEc
Confidence 999999999999999999654210 12358999999999999999999998 8999999999999999
Q ss_pred CCCCeEEeeccccccccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHH
Q 040242 495 ADLNPKLGDFGLARAYDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVL 572 (662)
Q Consensus 495 ~~~~~kL~DfGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l 572 (662)
.++.+||+|||+++........ ......++..|+|||.+.+..++.++|||||||++|||++ |..||....... +
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~---~ 251 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE---L 251 (307)
T ss_pred CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHH---H
Confidence 9999999999998865432111 1111234568999999988889999999999999999998 888886543211 1
Q ss_pred HHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 573 VDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 573 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
... ...+.. ...+......+.+++.+|++.+|++||+|.+|++.|...
T Consensus 252 ---~~~-~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~ 299 (307)
T cd05098 252 ---FKL-LKEGHR--------MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299 (307)
T ss_pred ---HHH-HHcCCC--------CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 111 111110 111223456788899999999999999999999999764
No 218
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6.7e-36 Score=304.79 Aligned_cols=248 Identities=30% Similarity=0.424 Sum_probs=199.9
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEe-ccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCR-KQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~-~~~~~~lV~E~ 433 (662)
++|+..+.||+|++|.||++.. .|..|++|.+.... ..+.+.+|+.++++++|+|++++++++. .++..+++|||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 4677889999999999999987 47789999986543 3467899999999999999999999764 45678999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++.... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 155 (256)
T cd05082 82 MAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 155 (256)
T ss_pred CCCCcHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceecccc
Confidence 99999999986542 3458899999999999999999999 89999999999999999999999999998854332
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
. ....++..|+|||++....++.++|||||||++|||++ |+.||...... .+..++.. +. .+
T Consensus 156 ~----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~---~~~~~~~~----~~-----~~- 218 (256)
T cd05082 156 Q----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK---DVVPRVEK----GY-----KM- 218 (256)
T ss_pred C----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHhc----CC-----CC-
Confidence 1 22344678999999988889999999999999999997 99998643221 11111111 10 01
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
......+..+.+++.+|++.+|++||++.++++.|..
T Consensus 219 --~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 219 --DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred --CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 1122345678889999999999999999999999874
No 219
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.7e-36 Score=309.94 Aligned_cols=254 Identities=25% Similarity=0.425 Sum_probs=204.0
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
+|+..+.||+|+||.||++....++..||+|.+... ......++.+|+.++++++|+||+++++++...+..++||||+
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYM 81 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeec
Confidence 577789999999999999999888999999988654 3344578899999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|..++..... ...+++..+..++.|+++||.|||+. .+++|+||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 82 DAGSLDKLYAGGVA--TEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred CCCCHHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 99999998854321 24689999999999999999999963 589999999999999999999999999997653321
Q ss_pred CCcceecccCCcccCcccccCCC------CCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccc
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGK------ATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRA 588 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~------~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 588 (662)
.....++..|+|||.+.+.. ++.++|||||||++|||++|+.||......... .-+. ..
T Consensus 158 ---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---~~~~---------~~ 222 (286)
T cd06622 158 ---AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF---AQLS---------AI 222 (286)
T ss_pred ---cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH---HHHH---------HH
Confidence 22245788999999885543 478999999999999999999999754321111 0000 11
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 589 IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 589 id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.+......+......+.+++.+|++.+|++||++.+++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 223 VDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred hhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 1111112233456778899999999999999999999974
No 220
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=9.3e-36 Score=305.42 Aligned_cols=250 Identities=25% Similarity=0.439 Sum_probs=202.5
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch---------hhHHHHHHHHHHhhccccccceeeeeeEeccCe
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR---------QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDE 426 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~---------~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~ 426 (662)
+|.....||+|++|.||+|....++..+|+|.+..... ...+.+..|+.++++++||||+++++++...+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 36677899999999999999988889999998865321 223568899999999999999999999999999
Q ss_pred eeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccc
Q 040242 427 LLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGL 506 (662)
Q Consensus 427 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGl 506 (662)
.++||||+++++|.+++.. ...+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||+
T Consensus 81 ~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~ 152 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNN-----YGAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGI 152 (267)
T ss_pred cEEEEEecCCCCHHHHHHh-----ccCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCC
Confidence 9999999999999999943 2458889999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCCC-----cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhh
Q 040242 507 ARAYDHNINP-----QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHS 581 (662)
Q Consensus 507 a~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~ 581 (662)
++........ ......|+..|+|||.+.+..++.++|||||||++|||++|+.||......... ...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~------~~~-- 224 (267)
T cd06628 153 SKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAI------FKI-- 224 (267)
T ss_pred CcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHH------HHH--
Confidence 9876532111 112235788999999998888999999999999999999999999754321110 000
Q ss_pred cCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 582 QGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 582 ~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.....+. .+......+..++.+||+.+|.+||++.+|+++
T Consensus 225 ----~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 225 ----GENASPE---IPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred ----hccCCCc---CCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 0111112 222345677889999999999999999999863
No 221
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.4e-35 Score=306.37 Aligned_cols=248 Identities=25% Similarity=0.390 Sum_probs=206.1
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
.|+..+.||+|+||.||+|.+..++..||+|.+.... ......+.+|+.++++++|+||+++++++......++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4667788999999999999998889999999987543 455678899999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.. ..+++.+...++.|+++||.|||+ .+++|+||+|+||+++.++.++|+|||++.......
T Consensus 85 ~~~~L~~~i~~------~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06640 85 GGGSALDLLRA------GPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ 155 (277)
T ss_pred CCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceeccCCc
Confidence 99999998843 347888999999999999999999 899999999999999999999999999998664432
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
.......++..|+|||.+.+..++.++|||||||++|||++|+.|+.......... .... .. ..
T Consensus 156 -~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~-------~~~~-----~~---~~ 219 (277)
T cd06640 156 -IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLF-------LIPK-----NN---PP 219 (277)
T ss_pred -cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhh-------hhhc-----CC---CC
Confidence 12233467889999999988889999999999999999999999987543221110 0000 00 12
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.........+.+++.+||+.+|++||++.+++++
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 220 TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 2334566778899999999999999999999875
No 222
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=9.4e-36 Score=303.58 Aligned_cols=249 Identities=28% Similarity=0.436 Sum_probs=201.7
Q ss_pred ceeeeeCceEEEEEEeCC-CC--cEEEEEEeeccch-hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPS-TG--LEVAIKRVAHNSR-QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~-~g--~~vavK~~~~~~~-~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
++||+|++|.||+|.+.. .+ ..||+|.+..... ...+.+..|+..+++++|+||+++++.+.. ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999999854 33 3699999987655 667789999999999999999999999988 889999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
++|.+++.+.. ...++|...+.++.|+++||+|||+ .+++|+||||+||+++.++.+||+|||+++........
T Consensus 80 ~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~ 153 (257)
T cd05040 80 GSLLDRLRKDA---LGHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDH 153 (257)
T ss_pred CcHHHHHHhcc---cccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEeccccccccccccccc
Confidence 99999996542 1468999999999999999999999 89999999999999999999999999999876543221
Q ss_pred --cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 517 --QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 517 --~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
......++..|+|||++.+..++.++|||||||++|||++ |+.||....... +...+.. .. ...
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~---~~~~~~~---~~-------~~~ 220 (257)
T cd05040 154 YVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQ---ILKKIDK---EG-------ERL 220 (257)
T ss_pred eecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHH---HHHHHHh---cC-------CcC
Confidence 1112456789999999988889999999999999999998 999986443221 1111110 00 011
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
..+...+..+.+++.+|++.+|++||++.++++.|.
T Consensus 221 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 221 -ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 112234567889999999999999999999999885
No 223
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=3.2e-36 Score=311.37 Aligned_cols=262 Identities=27% Similarity=0.432 Sum_probs=205.7
Q ss_pred cCCcccceeeeeCceEEEEEEeCC----CCcEEEEEEeeccchh-hHHHHHHHHHHhhccccccceeeeeeEec--cCee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPS----TGLEVAIKRVAHNSRQ-GMKEFVAEITSMGRLRHRNLVQLHGWCRK--QDEL 427 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~----~g~~vavK~~~~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~~~~~~--~~~~ 427 (662)
+.|+..+.||+|+||.||++.... ++..+|||.+...... ..++|.+|++.+++++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 346677899999999999998743 3788999999766443 56789999999999999999999999987 5578
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccc
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLA 507 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla 507 (662)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+ .+++|+||||+||+++.++.++|+|||++
T Consensus 84 ~lv~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~ 156 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH----RDQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLA 156 (284)
T ss_pred EEEEecCCCCCHHHHHHhC----ccccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccccc
Confidence 9999999999999999654 2359999999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCC--cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhh---------HHHHHHH
Q 040242 508 RAYDHNINP--QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAME---------LVLVDWV 576 (662)
Q Consensus 508 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~---------~~l~~~~ 576 (662)
......... ......++..|++||.+.+..++.++||||||++++||++|+.|+........ .....+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05038 157 KVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLL 236 (284)
T ss_pred cccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHH
Confidence 876533221 11123455679999999888899999999999999999999999764322110 0011111
Q ss_pred HHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 577 RELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 577 ~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
. ....+. . ...+......+.+++.+||+.+|++||+|.||+++|++.
T Consensus 237 ~-~~~~~~-------~-~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 237 E-LLKEGE-------R-LPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred H-HHHcCC-------c-CCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 1 111100 0 011223346788999999999999999999999999764
No 224
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.8e-37 Score=307.30 Aligned_cols=263 Identities=27% Similarity=0.335 Sum_probs=201.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccC-----eeeE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD-----ELLL 429 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~-----~~~l 429 (662)
-.|...+++|.|+||.||+|+...+++.||||+.-.+.+.. -.|+++|+++.|||||+++-++.... ...+
T Consensus 24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k----nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl 99 (364)
T KOG0658|consen 24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK----NRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL 99 (364)
T ss_pred EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC----cHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence 34666899999999999999999899999999986554322 36899999999999999998885432 3578
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC-CCeEEeeccccc
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD-LNPKLGDFGLAR 508 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~DfGla~ 508 (662)
||||||. +|.+.++.... .+..++.-.+.-...||.+||.|||+ .+|+||||||+|+|+|.+ +.+||||||.|+
T Consensus 100 VleymP~-tL~~~~r~~~~-~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 100 VLEYMPE-TLYRVIRHYTR-ANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHHhchH-HHHHHHHHHhh-cCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 9999965 88888864211 13456667777889999999999999 899999999999999987 899999999999
Q ss_pred cccCCCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhc-----
Q 040242 509 AYDHNINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQ----- 582 (662)
Q Consensus 509 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~----- 582 (662)
....+... ....-|..|.|||.+.+ ..|+.+.||||.|||+.||+-|++-|.+.....+..++--+-.....
T Consensus 175 ~L~~~epn--iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~ 252 (364)
T KOG0658|consen 175 VLVKGEPN--ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKS 252 (364)
T ss_pred eeccCCCc--eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhh
Confidence 88765433 23345889999998765 46999999999999999999999999886655554432222111111
Q ss_pred --CccccccCCCCC------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 583 --GQITRAIDPTLD------YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 583 --~~~~~~id~~l~------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.+..+...|.+. -.......+.++++.+++..+|.+|.++.|++.+
T Consensus 253 mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 253 MNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred cCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 111122223331 1334456778899999999999999999999974
No 225
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.7e-35 Score=303.71 Aligned_cols=251 Identities=26% Similarity=0.420 Sum_probs=198.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc-----chhhHHHHHHHHHHhhccccccceeeeeeEecc--Cee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-----SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ--DEL 427 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-----~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~--~~~ 427 (662)
.+|+..+.||+|+||.||++....++..|++|++... ..+..+.+.+|+.++++++||||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 4688899999999999999999888999999988643 223456788999999999999999999988653 568
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccc
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLA 507 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla 507 (662)
++++||+++++|.+++... ..+++...+.++.|+++||.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 82 ~l~~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~dfg~~ 153 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAY-----GALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGAS 153 (266)
T ss_pred EEEEeCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccCCCc
Confidence 8999999999999998532 347899999999999999999998 89999999999999999999999999999
Q ss_pred ccccCCC--CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcc
Q 040242 508 RAYDHNI--NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQI 585 (662)
Q Consensus 508 ~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 585 (662)
+...... ........++..|+|||.+.+..++.++|||||||++|||++|+.||........ +....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~------~~~~~----- 222 (266)
T cd06651 154 KRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAA------IFKIA----- 222 (266)
T ss_pred cccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHH------HHHHh-----
Confidence 8654321 1112234578999999999888899999999999999999999999975432211 11110
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 586 TRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 586 ~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.....+.+ +....+.+..++ .||..+|++||+++||+++
T Consensus 223 ~~~~~~~~---~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 223 TQPTNPQL---PSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred cCCCCCCC---chhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 01112222 222334455555 6888999999999999863
No 226
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-35 Score=318.64 Aligned_cols=194 Identities=23% Similarity=0.309 Sum_probs=168.0
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
...+|+..+.||+|+||.||+|....++..||+|..... ....|+.++++++|+||+++++++...+..++|+|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 446799999999999999999999888899999975433 23568999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|+ .++|.+++... ...+++.+++.++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 138 ~~-~~~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 209 (357)
T PHA03209 138 HY-SSDLYTYLTKR----SRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVV 209 (357)
T ss_pred cc-CCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCcccccccc
Confidence 99 56888887543 3568999999999999999999999 8999999999999999999999999999975332
Q ss_pred CCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIE 562 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~ 562 (662)
. .......||..|+|||++.+..++.++|||||||++|||+++..|+.
T Consensus 210 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f 257 (357)
T PHA03209 210 A--PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIF 257 (357)
T ss_pred C--cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccc
Confidence 1 22234568999999999998899999999999999999998666553
No 227
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1e-35 Score=308.21 Aligned_cols=262 Identities=25% Similarity=0.325 Sum_probs=206.0
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+|+..+.||+|++|.||+|.+..+|..|++|++.... ....+.+.+|+.++++++|+||+++++++......++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4777899999999999999998889999999987653 33456789999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+ +++|.+++... ...+++.+++.++.|+++||.|||+ .+++|+||||+||+++.++.++|+|||++......
T Consensus 81 ~-~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (286)
T cd07832 81 M-PSDLSEVLRDE----ERPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEE 152 (286)
T ss_pred c-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence 9 99999998644 2568999999999999999999999 89999999999999999999999999999876544
Q ss_pred CCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcC---------
Q 040242 514 INPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQG--------- 583 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~--------- 583 (662)
.........++..|+|||.+.+. .++.++||||+||+++||++|+.||........ ..++.......
T Consensus 153 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 153 EPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ---LAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred CCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH---HHHHHHHcCCCChHHHhhcc
Confidence 32223345789999999988654 468999999999999999999877765432211 11111111100
Q ss_pred ---ccccccCCC-----CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 584 ---QITRAIDPT-----LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 584 ---~~~~~id~~-----l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+......+. +....++....+.+++.+|++.+|.+||++++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000 011112334778999999999999999999999875
No 228
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=9.8e-36 Score=305.85 Aligned_cols=255 Identities=26% Similarity=0.393 Sum_probs=191.8
Q ss_pred eeeeeCceEEEEEEeCC--CCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCC
Q 040242 362 LVGSGGFGKVYRGVIPS--TGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGS 438 (662)
Q Consensus 362 ~LG~G~~g~Vy~~~~~~--~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gs 438 (662)
.||+|+||.||+|.... ....+++|.+.... ......|.+|+..++.++|+||++++++|......++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997532 34578899876543 3445678999999999999999999999999999999999999999
Q ss_pred cchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC-Cc
Q 040242 439 LDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN-PQ 517 (662)
Q Consensus 439 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~-~~ 517 (662)
|.+++...........++.....++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 9999976543223446788889999999999999999 8999999999999999999999999999875432211 11
Q ss_pred ceecccCCcccCcccccC-------CCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCcccccc
Q 040242 518 TTHIVGTLGYLAPELTRT-------GKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAI 589 (662)
Q Consensus 518 ~~~~~gt~~y~aPE~~~~-------~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 589 (662)
.....++..|+|||++.. ...+.++|||||||++|||++ |..||....... .+. .....+ .....
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~----~~~~~~-~~~~~ 231 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ--VLK----QVVREQ-DIKLP 231 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH--HHH----HHhhcc-CccCC
Confidence 122345778999998642 356889999999999999999 778886543221 111 111111 11111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 590 DPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 590 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
++.+ .......+..++..|+ .||++||++++|++.|.
T Consensus 232 ~~~~---~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 232 KPQL---DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCcc---cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 2222 2234455666777888 59999999999999874
No 229
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=3.3e-36 Score=307.63 Aligned_cols=241 Identities=27% Similarity=0.433 Sum_probs=192.3
Q ss_pred ceeeeeCceEEEEEEeCCCCc-------EEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 361 NLVGSGGFGKVYRGVIPSTGL-------EVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~-------~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+.||+|+||.||+|.....+. .|++|.+........+.+.+|+.+++.++|||++++++++...+..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 469999999999998855443 4888988766556667889999999999999999999999998999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCC--------eEEeecc
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLN--------PKLGDFG 505 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--------~kL~DfG 505 (662)
+++|+|.+++... ...+++..++.++.||+.||.|||+ .+|+||||||+||+++.++. ++++|||
T Consensus 81 ~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 81 VKFGSLDTYLKKN----KNLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred CCCCcHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEecccc
Confidence 9999999999654 2368899999999999999999999 89999999999999988765 5899999
Q ss_pred ccccccCCCCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCC-CCCCcccchhhHHHHHHHHHHhhcC
Q 040242 506 LARAYDHNINPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGR-RPIEPQRTAMELVLVDWVRELHSQG 583 (662)
Q Consensus 506 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~-~p~~~~~~~~~~~l~~~~~~~~~~~ 583 (662)
++..... .....++..|+|||++.+. .++.++|||||||++|||++|. .|+.......... ....
T Consensus 154 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-------~~~~- 220 (258)
T cd05078 154 ISITVLP-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-------FYED- 220 (258)
T ss_pred cccccCC-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-------HHHc-
Confidence 8875432 1224578899999998764 5789999999999999999995 5554332221111 0110
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 584 QITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 584 ~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
... .+......+.+++.+||+.+|++||+++++++.|+
T Consensus 221 ------~~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 ------RHQ---LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ------ccc---CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 011 11122356889999999999999999999999874
No 230
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=8.8e-36 Score=317.78 Aligned_cols=261 Identities=23% Similarity=0.365 Sum_probs=201.4
Q ss_pred cCCcccceeeeeCceEEEEEEe-----CCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhcc-ccccceeeeeeEecc-Ce
Q 040242 355 KGFREKNLVGSGGFGKVYRGVI-----PSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQ-DE 426 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~-----~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~-~~ 426 (662)
++|+..+.||+|+||.||+|.. ..+++.||||++.... ......+.+|+.++.++ +|+||++++++|... ..
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~ 86 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGP 86 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCc
Confidence 5788899999999999999984 2356789999997543 33456788999999999 689999999988654 46
Q ss_pred eeEEEeccCCCCcchhccccccc---------------------------------------------------------
Q 040242 427 LLLVYDYVPNGSLDKLLFDNDQQ--------------------------------------------------------- 449 (662)
Q Consensus 427 ~~lV~E~~~~gsL~~~l~~~~~~--------------------------------------------------------- 449 (662)
.++||||+++|+|.+++......
T Consensus 87 ~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
T cd05103 87 LMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEA 166 (343)
T ss_pred eEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhh
Confidence 79999999999999998642100
Q ss_pred -----ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC-Ccceeccc
Q 040242 450 -----KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN-PQTTHIVG 523 (662)
Q Consensus 450 -----~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~-~~~~~~~g 523 (662)
....++|.++..++.|+++||.|||+ .+|+||||||+||+++.++.+||+|||+++....... .......+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~ 243 (343)
T cd05103 167 EQEDLYKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARL 243 (343)
T ss_pred hhhhhhhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCC
Confidence 01347889999999999999999999 8999999999999999999999999999986532211 11122345
Q ss_pred CCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHH
Q 040242 524 TLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAE 602 (662)
Q Consensus 524 t~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~ 602 (662)
+..|+|||.+.+..++.++||||||+++|||++ |..|+........ +. .....+.. .... .....
T Consensus 244 ~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~--~~----~~~~~~~~-----~~~~---~~~~~ 309 (343)
T cd05103 244 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE--FC----RRLKEGTR-----MRAP---DYTTP 309 (343)
T ss_pred CcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH--HH----HHHhccCC-----CCCC---CCCCH
Confidence 678999999988889999999999999999997 8889865432211 11 11111111 0111 11234
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 603 LVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 603 ~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
.+.+++..||+.+|++||++.||+++|+..
T Consensus 310 ~~~~~~~~cl~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 310 EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 578899999999999999999999999764
No 231
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1.3e-35 Score=302.12 Aligned_cols=249 Identities=28% Similarity=0.438 Sum_probs=203.5
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-----hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-----RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-----~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
+|+..+.||+|++|.||+|....++..|++|.+.... .+..+.+.+|+.++++++|+||+++++++...+..+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4667889999999999999998789999999986543 33567889999999999999999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
|||+++++|.+++... ..+++..++.++.|+++||.|||+ .+++|+||+|+||+++.++.+||+|||++...
T Consensus 81 ~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~ 152 (258)
T cd06632 81 LELVPGGSLAKLLKKY-----GSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQV 152 (258)
T ss_pred EEecCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceec
Confidence 9999999999998532 358899999999999999999999 89999999999999999999999999998865
Q ss_pred cCCCCCcceecccCCcccCcccccCCC-CCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcccccc
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTGK-ATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAI 589 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 589 (662)
.... ......++..|++||.+.... ++.++|+|||||++|+|++|+.||....... .........
T Consensus 153 ~~~~--~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~------~~~~~~~~~------ 218 (258)
T cd06632 153 VEFS--FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA------AVFKIGRSK------ 218 (258)
T ss_pred cccc--cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH------HHHHHHhcc------
Confidence 4332 223456889999999987766 8999999999999999999999997543211 111110000
Q ss_pred CCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 590 DPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 590 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.....+......+.+++++||+.+|.+||++.+++++
T Consensus 219 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 219 --ELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred --cCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 1111222345667889999999999999999999863
No 232
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.2e-35 Score=305.38 Aligned_cols=255 Identities=26% Similarity=0.396 Sum_probs=203.4
Q ss_pred cCCcccceeeeeCceEEEEEEeCCC---CcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPST---GLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~---g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
++|...+.||+|+||.||+|..... ...|+||...... ....+.+.+|+.++++++||||+++++++.. +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 4577789999999999999987543 3468999887654 4556789999999999999999999999875 557899
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
|||+++++|.+++... ...+++.+++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+++..
T Consensus 85 ~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 85 MELAPLGELRSYLQVN----KYSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEcCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeec
Confidence 9999999999999543 2358999999999999999999998 89999999999999999999999999999866
Q ss_pred cCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCcccccc
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAI 589 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 589 (662)
............++..|+|||.+....++.++||||||+++|||++ |..||........ ..++. .+...
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~---~~~~~----~~~~~--- 227 (270)
T cd05056 158 EDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDV---IGRIE----NGERL--- 227 (270)
T ss_pred ccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHH---HHHHH----cCCcC---
Confidence 5432222222334578999999988889999999999999999986 9999975543211 11111 11100
Q ss_pred CCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 590 DPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 590 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
. .....+..+.+++.+|+..+|++||++.++++.|...
T Consensus 228 --~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~ 265 (270)
T cd05056 228 --P---MPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDI 265 (270)
T ss_pred --C---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 1 1123345788899999999999999999999998753
No 233
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=1e-35 Score=309.42 Aligned_cols=265 Identities=25% Similarity=0.315 Sum_probs=209.1
Q ss_pred cchHHHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcc-ccccceeeeeeEec
Q 040242 345 FRYSELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRK 423 (662)
Q Consensus 345 ~~~~el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~ 423 (662)
+.+.++..++++|+..+.||+|+||.||++....+++.+|+|++.... ....++.+|+.++.++ +|||++++++++..
T Consensus 12 ~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 556777788999999999999999999999998899999999986542 2245677899999998 89999999999865
Q ss_pred c-----CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCC
Q 040242 424 Q-----DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLN 498 (662)
Q Consensus 424 ~-----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 498 (662)
. +..++||||+++++|.+++..... ....+++..++.++.|++.||.|||+ .+++||||||+||+++.++.
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLI-CGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILLTTEGG 166 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhh-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCC
Confidence 4 358999999999999998864321 13568999999999999999999999 89999999999999999999
Q ss_pred eEEeeccccccccCCCCCcceecccCCcccCcccccCC-----CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHH
Q 040242 499 PKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRTG-----KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLV 573 (662)
Q Consensus 499 ~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~ 573 (662)
+||+|||++........ ......|+..|+|||.+... .++.++|||||||++|||++|+.||........ +.
T Consensus 167 ~kl~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~--~~ 243 (291)
T cd06639 167 VKLVDFGVSAQLTSTRL-RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKT--LF 243 (291)
T ss_pred EEEeecccchhcccccc-cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHH--HH
Confidence 99999999886543221 12234688999999987543 368899999999999999999999975432211 11
Q ss_pred HHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 574 DWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 574 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.+. .+. .+.+. ........+..++.+|++.+|++||++.|++++
T Consensus 244 ~~~-----~~~-----~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 244 KIP-----RNP-----PPTLL-HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHh-----cCC-----CCCCC-cccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 111 011 01111 112234568899999999999999999999875
No 234
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.6e-36 Score=322.98 Aligned_cols=253 Identities=23% Similarity=0.334 Sum_probs=197.6
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|+||+||++....+++.||||++.... ......+..|+.++.+++|+||+++++++...+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 36888999999999999999998899999999997542 334567888999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++|+|.+++... ..+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++...
T Consensus 81 E~~~gg~L~~~l~~~-----~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~ 152 (360)
T cd05627 81 EFLPGGDMMTLLMKK-----DTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK 152 (360)
T ss_pred eCCCCccHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence 999999999998543 458899999999999999999999 899999999999999999999999999987543
Q ss_pred CCCC----------------------------------CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcC
Q 040242 512 HNIN----------------------------------PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACG 557 (662)
Q Consensus 512 ~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG 557 (662)
.... .......||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG 232 (360)
T cd05627 153 KAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232 (360)
T ss_pred cccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccC
Confidence 2100 001234699999999999988999999999999999999999
Q ss_pred CCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCC---HHHHHHH
Q 040242 558 RRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPS---TRRVVQF 628 (662)
Q Consensus 558 ~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt---~~eVl~~ 628 (662)
+.||......... ...... ...-.+.+. .. ....+.+++.+|+ .+|.+|++ +.|++++
T Consensus 233 ~~Pf~~~~~~~~~------~~i~~~-~~~~~~p~~-~~----~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 233 YPPFCSETPQETY------RKVMNW-KETLVFPPE-VP----ISEKAKDLILRFC-TDSENRIGSNGVEEIKSH 293 (360)
T ss_pred CCCCCCCCHHHHH------HHHHcC-CCceecCCC-CC----CCHHHHHHHHHhc-cChhhcCCCCCHHHHhcC
Confidence 9999765432111 111100 000001111 11 2334555666665 49999985 6777764
No 235
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1.8e-35 Score=308.51 Aligned_cols=262 Identities=25% Similarity=0.350 Sum_probs=202.5
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh-----hHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ-----GMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~-----~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
+|+..+.||+|++|.||+|....+++.|+||++...... ....+..|++++++++|+||+++++++...+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 477788999999999999999888999999999765322 345677899999999999999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
|||+ +++|.+++... ...+++..++.++.|+++||.|||+ .+++|+||||+||+++.++.++|+|||+++..
T Consensus 81 ~e~~-~~~L~~~i~~~----~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~ 152 (298)
T cd07841 81 FEFM-ETDLEKVIKDK----SIVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSF 152 (298)
T ss_pred Eccc-CCCHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeec
Confidence 9999 99999999543 2368999999999999999999999 89999999999999999999999999999876
Q ss_pred cCCCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHH-------hh-
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVREL-------HS- 581 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~-------~~- 581 (662)
..... ......++..|+|||.+.+ ..++.++|||||||+++||++|..||.......... ...... +.
T Consensus 153 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 229 (298)
T cd07841 153 GSPNR-KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLG--KIFEALGTPTEENWPG 229 (298)
T ss_pred cCCCc-cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHH--HHHHHcCCCchhhhhh
Confidence 54321 2223356788999998854 457899999999999999999987776543321111 000000 00
Q ss_pred cCcccccc------CCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 582 QGQITRAI------DPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 582 ~~~~~~~i------d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
........ ...+..........+.+++.+||+.+|++||++.|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00000000 011111122345678899999999999999999999985
No 236
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1e-35 Score=307.65 Aligned_cols=261 Identities=22% Similarity=0.352 Sum_probs=206.7
Q ss_pred ccCCcccceeeeeCceEEEEEEeCC----CCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEec-cCee
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPS----TGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRK-QDEL 427 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~----~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~-~~~~ 427 (662)
.++|+..++||+|+||.||+|.... .+..|++|++... .....+.+.+|+.++++++|+||+++++++.. ....
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 4678889999999999999999864 2578999988654 33446778999999999999999999999876 4678
Q ss_pred eEEEeccCCCCcchhccccccc---ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQ---KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~---~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
++++||+++++|.+++...... ....+++.+++.++.|++.||.|||+ .+++||||||+||++++++.+||+||
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~d~ 161 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKITDN 161 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEECCC
Confidence 9999999999999998654321 12568999999999999999999998 89999999999999999999999999
Q ss_pred cccccccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhc
Q 040242 505 GLARAYDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQ 582 (662)
Q Consensus 505 Gla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~ 582 (662)
|+++.+...... ......++..|+|||++.+..++.++|||||||++||+++ |+.||...... .+..++..
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~---~~~~~~~~---- 234 (280)
T cd05043 162 ALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPF---EMAAYLKD---- 234 (280)
T ss_pred CCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHH---HHHHHHHc----
Confidence 999865432211 1112345678999999988889999999999999999999 99999754321 12222211
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 583 GQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 583 ~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
+. .+. .....+..+.+++.+||+.+|++||++.++++.|+..
T Consensus 235 ~~-------~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 235 GY-------RLA-QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred CC-------CCC-CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 10 010 1112345688999999999999999999999998753
No 237
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.4e-35 Score=301.21 Aligned_cols=247 Identities=26% Similarity=0.439 Sum_probs=199.7
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccch-hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCc
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR-QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL 439 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~-~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 439 (662)
++||+|++|.||++.+.. ++.|++|.+..... ...+.+.+|++++++++|+||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l 79 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL 79 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence 469999999999999976 89999999876533 3567899999999999999999999999999999999999999999
Q ss_pred chhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcc-
Q 040242 440 DKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQT- 518 (662)
Q Consensus 440 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~- 518 (662)
.+++... ...+++..++.++.+++++|.|||+ .+++||||||+||+++.++.+||+|||++...........
T Consensus 80 ~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~ 152 (251)
T cd05041 80 LTFLRKK----KNRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSD 152 (251)
T ss_pred HHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceecc
Confidence 9998543 2357899999999999999999999 8999999999999999999999999999986543221111
Q ss_pred eecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCC
Q 040242 519 THIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFD 597 (662)
Q Consensus 519 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~ 597 (662)
.....+..|+|||.+.++.++.++|||||||++|||++ |..||....... ....+. .+. .+ ..+
T Consensus 153 ~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~---~~~~~~----~~~-------~~-~~~ 217 (251)
T cd05041 153 GLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQ---TRERIE----SGY-------RM-PAP 217 (251)
T ss_pred ccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHH---HHHHHh----cCC-------CC-CCC
Confidence 11234567999999988889999999999999999999 888886543221 111111 100 00 112
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 598 PQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 598 ~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
......+.+++.+|++.+|++||++.|+++.|.
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 234567889999999999999999999999885
No 238
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.3e-35 Score=303.04 Aligned_cols=256 Identities=25% Similarity=0.428 Sum_probs=207.4
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEec--cCeeeEEE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRK--QDELLLVY 431 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~--~~~~~lV~ 431 (662)
+|+..+.||.|++|.||++....++..+|+|++... .....+++..|+.++++++|+||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477789999999999999999888999999998653 33445678899999999999999999998754 34689999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcC--CCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEEC--DQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
||+++++|.+++..... ....+++.+++.++.|+++||.|||..+ ..+++|+||+|+||+++.++.+||+|||++..
T Consensus 81 e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 81 EYCEGGDLAQLIQKCKK-ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred hhccCCCHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 99999999999965321 2456899999999999999999999322 28999999999999999999999999999987
Q ss_pred ccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcccccc
Q 040242 510 YDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAI 589 (662)
Q Consensus 510 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 589 (662)
...... ......+++.|+|||.+....++.++||||||+++++|++|+.||...... .+.+.+. .+
T Consensus 160 ~~~~~~-~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~----~~------ 225 (265)
T cd08217 160 LGHDSS-FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQL---QLASKIK----EG------ 225 (265)
T ss_pred ccCCcc-cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHH---HHHHHHh----cC------
Confidence 654332 122346899999999998888999999999999999999999999865421 1111111 11
Q ss_pred CCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 590 DPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 590 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.....+......+.+++.+|++.+|++||++.+|+++
T Consensus 226 --~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 226 --KFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred --CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 1122333455778899999999999999999999975
No 239
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.8e-36 Score=301.86 Aligned_cols=268 Identities=24% Similarity=0.315 Sum_probs=206.7
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh--hHHHHHHHHHHhhcccccc-ceeeeeeEeccC------
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ--GMKEFVAEITSMGRLRHRN-LVQLHGWCRKQD------ 425 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~--~~~~f~~Ei~~l~~l~H~n-iv~l~~~~~~~~------ 425 (662)
..|...++||+|.||+||+|+.+.+|+.||+|++....++ ......+|+.++++++|+| ||++.+++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 3456677899999999999999999999999999776442 3345689999999999999 999999998877
Q ss_pred eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecc
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFG 505 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 505 (662)
.+++|+||+ .-+|..++....... ..++...+..++.||++||.|||+ ++|+||||||+|||++++|.+||+|||
T Consensus 91 ~l~lvfe~~-d~DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 91 KLYLVFEFL-DRDLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred eEEEEEEee-cccHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccc
Confidence 789999999 669999996654211 356668899999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCc
Q 040242 506 LARAYDHNINPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQ 584 (662)
Q Consensus 506 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 584 (662)
+|+.+.-... ..+..++|..|.|||++.+. .++...||||+|||+.||++++..|.+..+..+...+-.+.....+..
T Consensus 166 lAra~~ip~~-~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~ 244 (323)
T KOG0594|consen 166 LARAFSIPMR-TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKD 244 (323)
T ss_pred hHHHhcCCcc-cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccC
Confidence 9997764432 24456789999999988766 689999999999999999999999987765433322111111111110
Q ss_pred ccc---ccCC--CC------CCCCHH---HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 585 ITR---AIDP--TL------DYFDPQ---EAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 585 ~~~---~id~--~l------~~~~~~---~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.-. .-+- .. ...... ......+++.+|++.+|.+|.+++.++++
T Consensus 245 Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 245 WPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 000 0010 01 011111 11367889999999999999999999985
No 240
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.4e-35 Score=306.55 Aligned_cols=257 Identities=25% Similarity=0.383 Sum_probs=205.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCc----EEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGL----EVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~----~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
.+|+..+.||+|+||.||+|..+.+|. .+|+|.+.... .....++.+|+..+++++|+||++++++|.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 457778999999999999999866554 58999886653 3455788999999999999999999999987 78899
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++.
T Consensus 86 v~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~ 158 (279)
T cd05057 86 ITQLMPLGCLLDYVRNH----KDNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (279)
T ss_pred EEecCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCccccc
Confidence 99999999999999654 3458999999999999999999999 8999999999999999999999999999987
Q ss_pred ccCCCCCcc-eecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCcccc
Q 040242 510 YDHNINPQT-THIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITR 587 (662)
Q Consensus 510 ~~~~~~~~~-~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 587 (662)
......... ....++..|+|||.+....++.++||||||+++||+++ |+.||....... +...+ ..+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~~~~~----~~~~~-- 229 (279)
T cd05057 159 LDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVE---IPDLL----EKGER-- 229 (279)
T ss_pred ccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHH---HHHHH----hCCCC--
Confidence 653322111 11223568999999988889999999999999999998 999987543221 11111 11110
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCC
Q 040242 588 AIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDAS 634 (662)
Q Consensus 588 ~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~ 634 (662)
...+......+.+++.+||..+|.+||++.++++.|.....
T Consensus 230 ------~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05057 230 ------LPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270 (279)
T ss_pred ------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 01111233467888999999999999999999999987533
No 241
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.5e-35 Score=305.37 Aligned_cols=260 Identities=23% Similarity=0.362 Sum_probs=206.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCC-----CCcEEEEEEeeccchh-hHHHHHHHHHHhhccccccceeeeeeEeccCeee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPS-----TGLEVAIKRVAHNSRQ-GMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELL 428 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~-----~g~~vavK~~~~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~ 428 (662)
++|+..+.||+|+||.||+|..+. ....|++|.+...... ..+++.+|++++++++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 568888999999999999999743 3467999988665443 5678999999999999999999999999989999
Q ss_pred EEEeccCCCCcchhcccccccc----cccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQK----KKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~----~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
+||||+++++|.+++....... ...+++..++.++.|+++||+|||+ .+++||||||+||+++.++.++|+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999996543110 1268999999999999999999998 89999999999999999999999999
Q ss_pred cccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcC
Q 040242 505 GLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQG 583 (662)
Q Consensus 505 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~ 583 (662)
|+++..............++..|+|||.+.+...+.++||||||+++|||++ |..||...... ...... ..+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~---~~~~~~----~~~ 234 (275)
T cd05046 162 SLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE---EVLNRL----QAG 234 (275)
T ss_pred ccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchH---HHHHHH----HcC
Confidence 9987543322222333456788999999988888999999999999999999 77888643221 111111 111
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 584 QITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 584 ~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
.... ......+..+.+++.+||+.+|++||++.|+++.|.+
T Consensus 235 ~~~~-------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 235 KLEL-------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred CcCC-------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 1110 1112344678899999999999999999999998863
No 242
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=3.5e-35 Score=309.28 Aligned_cols=252 Identities=26% Similarity=0.345 Sum_probs=203.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch---hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR---QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|++|.||++....++..||+|.+..... ...+.+..|++++++++|+||+++++.+......++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 368888999999999999999988899999999976532 34567899999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++++|.+++.... ...+++..+..++.|+++||.|||+ .+++|+||||+||+++.++.++|+|||++....
T Consensus 81 e~~~~~~L~~~~~~~~---~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 154 (316)
T cd05574 81 DYCPGGELFRLLQRQP---GKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSD 154 (316)
T ss_pred EecCCCCHHHHHHhCC---CCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhccc
Confidence 9999999999986432 3568999999999999999999999 899999999999999999999999999987653
Q ss_pred CCCCC----------------------------cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 040242 512 HNINP----------------------------QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEP 563 (662)
Q Consensus 512 ~~~~~----------------------------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~ 563 (662)
..... ......|+..|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~ 234 (316)
T cd05574 155 VEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKG 234 (316)
T ss_pred ccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCC
Confidence 32110 11123678899999999888899999999999999999999999975
Q ss_pred ccchhhHHHHHHHHHHhhcCccccccCCCC-CCCCHHHHHHHHHHHHHccCCCCCCCCC----HHHHHH
Q 040242 564 QRTAMELVLVDWVRELHSQGQITRAIDPTL-DYFDPQEAELVLTLGLLCCDPHPDFRPS----TRRVVQ 627 (662)
Q Consensus 564 ~~~~~~~~l~~~~~~~~~~~~~~~~id~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt----~~eVl~ 627 (662)
...... +. . ...... ..........+.+++.+|++.+|++||+ +.|+++
T Consensus 235 ~~~~~~--~~----~---------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 235 SNRDET--FS----N---------ILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred CchHHH--HH----H---------HhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 433211 10 0 011111 0011125677899999999999999999 555554
No 243
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.4e-35 Score=310.41 Aligned_cols=260 Identities=25% Similarity=0.396 Sum_probs=204.4
Q ss_pred cCCcccceeeeeCceEEEEEEeC-------CCCcEEEEEEeecc-chhhHHHHHHHHHHhhcc-ccccceeeeeeEeccC
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIP-------STGLEVAIKRVAHN-SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQD 425 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~-------~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~ 425 (662)
.+|...+.||+|+||.||++... .....+|+|.+... ......++..|+.+++++ +||||++++++|...+
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG 91 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC
Confidence 56778899999999999999753 23457999998754 334456789999999999 6999999999999999
Q ss_pred eeeEEEeccCCCCcchhcccccc-----------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeC
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQ-----------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLID 494 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 494 (662)
..+++|||+++|+|.+++..... .....++|.++.+++.|++.||.|||+ .+++||||||+||+++
T Consensus 92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~ 168 (314)
T cd05099 92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLVT 168 (314)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEEc
Confidence 99999999999999999965321 112458999999999999999999998 8999999999999999
Q ss_pred CCCCeEEeeccccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHH
Q 040242 495 ADLNPKLGDFGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVL 572 (662)
Q Consensus 495 ~~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l 572 (662)
.++.+||+|||+++....... .......++..|+|||.+.++.++.++|||||||++|||++ |..||....... +
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~---~ 245 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEE---L 245 (314)
T ss_pred CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHH---H
Confidence 999999999999986543211 11112234567999999988889999999999999999999 888886543211 1
Q ss_pred HHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 573 VDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 573 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
...+ ..+.. ...+......+.+++.+|++.+|++||++.++++.|.+.
T Consensus 246 ~~~~----~~~~~--------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 246 FKLL----REGHR--------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred HHHH----HcCCC--------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 1111 11110 011223345677899999999999999999999998765
No 244
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=2e-35 Score=300.72 Aligned_cols=250 Identities=23% Similarity=0.378 Sum_probs=204.6
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+|+..+.||+|++|.||++....++..+|+|++... .....+.+.+|+.++++++|||++++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 477889999999999999999889999999998654 234467889999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCC-CeEEeeccccccccC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADL-NPKLGDFGLARAYDH 512 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~DfGla~~~~~ 512 (662)
+++++|.+++.... ...+++..+..++.+++++|.|||+ .+++|+||+|+||+++++. .+||+|||++.....
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (256)
T cd08220 81 APGGTLAEYIQKRC---NSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILSS 154 (256)
T ss_pred CCCCCHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecCC
Confidence 99999999996532 3458999999999999999999999 8999999999999998654 589999999987654
Q ss_pred CCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
.. ......++..|+|||.+.+...+.++||||||+++|+|++|+.||....... ....+ .. +.
T Consensus 155 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~---~~~~~---~~-~~-------- 217 (256)
T cd08220 155 KS--KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPA---LVLKI---MS-GT-------- 217 (256)
T ss_pred Cc--cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHH---HHHHH---Hh-cC--------
Confidence 32 2223467899999999988889999999999999999999999997543321 11111 10 00
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
...........+..++.+||+.+|++||+++|++++
T Consensus 218 ~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 218 FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 111122245568899999999999999999999874
No 245
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.2e-35 Score=302.75 Aligned_cols=239 Identities=27% Similarity=0.452 Sum_probs=191.9
Q ss_pred ceeeeeCceEEEEEEeCCCC----------cEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 361 NLVGSGGFGKVYRGVIPSTG----------LEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g----------~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
+.||+|+||.||+|.+...+ ..+++|.+...... ...|.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46999999999999997655 35888887655433 6788999999999999999999999988 778999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCC-------CeEEee
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADL-------NPKLGD 503 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-------~~kL~D 503 (662)
|||+++|+|.+++.... ..+++..++.++.|++.||.|||+ .+++||||||+||+++.++ .+||+|
T Consensus 79 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 79 EEYVKFGPLDVFLHREK----NNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred EEcCCCCcHHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEeCC
Confidence 99999999999996542 268899999999999999999998 8999999999999999888 799999
Q ss_pred ccccccccCCCCCcceecccCCcccCcccccCC--CCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHh
Q 040242 504 FGLARAYDHNINPQTTHIVGTLGYLAPELTRTG--KATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELH 580 (662)
Q Consensus 504 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~ 580 (662)
||++..... .....++..|+|||++... .++.++|||||||++|||++ |..|+......... .+.
T Consensus 152 fg~a~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~---~~~---- 219 (259)
T cd05037 152 PGIPITVLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE---RFY---- 219 (259)
T ss_pred CCccccccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHH---HHH----
Confidence 999986543 2223567789999998776 78999999999999999999 56777544321111 111
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 581 SQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 581 ~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
.... ... ......+.+++.+||..+|++||++.+|++.|.
T Consensus 220 ~~~~-------~~~---~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 220 QDQH-------RLP---MPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred hcCC-------CCC---CCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 0000 010 011167889999999999999999999999874
No 246
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.2e-35 Score=307.99 Aligned_cols=266 Identities=27% Similarity=0.369 Sum_probs=206.3
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
++|+..+.||+|++|.||+|.+..+++.|++|++... .....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 3688899999999999999999888999999988653 23345778999999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|++++.|..++.. ...+++.+++.++.|++.||.|||+ .+++|+||+|+||++++++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~ 152 (288)
T cd07833 81 YVERTLLELLEAS-----PGGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRA 152 (288)
T ss_pred cCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCC
Confidence 9998777766532 3458899999999999999999999 8999999999999999999999999999987665
Q ss_pred CCCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHH--------Hhh-c
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRE--------LHS-Q 582 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~--------~~~-~ 582 (662)
..........++..|+|||++.+. .++.++||||||+++|||++|+.||................. .+. .
T Consensus 153 ~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07833 153 RPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSN 232 (288)
T ss_pred CccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccC
Confidence 433233345678899999999887 789999999999999999999999875433221111100000 000 0
Q ss_pred Ccc-----ccccCCCC--CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 583 GQI-----TRAIDPTL--DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 583 ~~~-----~~~id~~l--~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
... .+..++.. ..++......+.+++++||+.+|++||++++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 233 PRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred ccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 000 00000000 01122236778999999999999999999999863
No 247
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.6e-35 Score=301.43 Aligned_cols=252 Identities=27% Similarity=0.499 Sum_probs=203.7
Q ss_pred CcccceeeeeCceEEEEEEeCCCC----cEEEEEEeeccchh-hHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTG----LEVAIKRVAHNSRQ-GMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g----~~vavK~~~~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
|+..+.||.|+||.||++.....+ ..||+|.+...... ..+.+..|+..+.+++|+||+++++++...+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 345688999999999999997655 88999999765433 5678999999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++++|.+++.... ...+++.+++.++.|++.||+|||+ .+++|+||||+||+++.++.++|+|||+++...
T Consensus 81 e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~ 154 (258)
T smart00219 81 EYMEGGDLLDYLRKNR---PKELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDLY 154 (258)
T ss_pred eccCCCCHHHHHHhhh---hccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceecc
Confidence 9999999999996542 2228999999999999999999999 899999999999999999999999999998765
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
...........++..|+|||.+....++.++||||+|++++||++ |+.||...... .+...+. .+..
T Consensus 155 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~---~~~~~~~----~~~~----- 222 (258)
T smart00219 155 DDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE---EVLEYLK----KGYR----- 222 (258)
T ss_pred cccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHh----cCCC-----
Confidence 442222212346789999999988889999999999999999998 77887653221 1111111 1110
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
..........+.+++.+|+..+|++|||+.|+++.|
T Consensus 223 ---~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 223 ---LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ---CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 011122456688899999999999999999999865
No 248
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.5e-35 Score=306.89 Aligned_cols=265 Identities=27% Similarity=0.338 Sum_probs=203.6
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
++|+..+.||+|++|.||+|++..+++.||+|++.... ....+.+.+|+.++++++|+|++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888899999999999999998889999999986542 2234567899999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|++++.|..++.. ...+++.++..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07847 81 YCDHTVLNELEKN-----PRGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTG 152 (286)
T ss_pred ccCccHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCC
Confidence 9999988887643 2358999999999999999999999 8999999999999999999999999999987654
Q ss_pred CCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHH-HHHH----H---HHhhcC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVL-VDWV----R---ELHSQG 583 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l-~~~~----~---~~~~~~ 583 (662)
... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||......+.... .... . ..+...
T Consensus 153 ~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07847 153 PGD-DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTN 231 (286)
T ss_pred Ccc-cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccc
Confidence 321 2223457889999998865 4578999999999999999999999975543222111 0000 0 000000
Q ss_pred ccc-cccCCCCC-CC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 584 QIT-RAIDPTLD-YF-----DPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 584 ~~~-~~id~~l~-~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
... ....+... .. .......+.+++.+||+.+|++||++.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 232 QFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred cccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 000 00001110 00 11234668899999999999999999999864
No 249
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=9.1e-36 Score=305.81 Aligned_cols=252 Identities=29% Similarity=0.461 Sum_probs=200.0
Q ss_pred ceeeeeCceEEEEEEeCCCC------cEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 361 NLVGSGGFGKVYRGVIPSTG------LEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g------~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+.||+|+||.||+|+..... ..+++|.+.... .....++.+|+.++++++||||++++++|...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 46999999999999985433 679999886543 34467889999999999999999999999999999999999
Q ss_pred cCCCCcchhccccccc--ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCC-----CeEEeeccc
Q 040242 434 VPNGSLDKLLFDNDQQ--KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADL-----NPKLGDFGL 506 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-----~~kL~DfGl 506 (662)
+++++|.+++...... ....+++.+++.++.|++.||.|||+ .+++|+||||+||+++.+. .++|+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCccc
Confidence 9999999999654321 13458899999999999999999998 8999999999999999887 899999999
Q ss_pred cccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCc
Q 040242 507 ARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQ 584 (662)
Q Consensus 507 a~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~ 584 (662)
++....... .......++..|+|||.+.++.++.++|||||||++|||++ |+.||...... .....+. .+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~---~~~~~~~----~~~ 230 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQ---EVLQHVT----AGG 230 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHH---HHHHHHh----cCC
Confidence 976533211 11122345688999999998999999999999999999998 99998644321 1111111 000
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 585 ITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 585 ~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
. .......+..+.+++.+||..+|++||++.+|++.|.
T Consensus 231 -------~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 231 -------R-LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred -------c-cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 0 1112234567889999999999999999999999986
No 250
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.8e-35 Score=301.39 Aligned_cols=257 Identities=25% Similarity=0.378 Sum_probs=208.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
++|+..+.||.|++|+||+|....++..+++|++.... ....+.+.+|++.++.++|+|++++++.+...+..++|+|+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888999999999999999998889999999986542 33567889999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++..... ...+++.....++.|++.||.|||+ .+++|+||+|+||++++++.++|+|||++..+...
T Consensus 81 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~ 155 (267)
T cd06610 81 LSGGSLLDIMKSSYP--RGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADG 155 (267)
T ss_pred cCCCcHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccC
Confidence 999999999965321 2468999999999999999999998 89999999999999999999999999999876543
Q ss_pred CCC---cceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcccccc
Q 040242 514 INP---QTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAI 589 (662)
Q Consensus 514 ~~~---~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 589 (662)
... ......|+..|+|||++... .++.++|+|||||++|||++|+.||....... .+..... ..
T Consensus 156 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~--~~~~~~~----------~~ 223 (267)
T cd06610 156 GDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK--VLMLTLQ----------ND 223 (267)
T ss_pred ccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh--hHHHHhc----------CC
Confidence 222 12334688999999998776 78999999999999999999999997543221 1111111 11
Q ss_pred CCCCCCC--CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 590 DPTLDYF--DPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 590 d~~l~~~--~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.+.+... .......+.+++.+|++.||++||++.+++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 224 PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 1122111 12445678899999999999999999999874
No 251
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.4e-35 Score=302.81 Aligned_cols=256 Identities=25% Similarity=0.429 Sum_probs=203.9
Q ss_pred CCcccceeeeeCceEEEEEEeCC-CCcEEEEEEeecc----------chhhHHHHHHHHHHhhc-cccccceeeeeeEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPS-TGLEVAIKRVAHN----------SRQGMKEFVAEITSMGR-LRHRNLVQLHGWCRK 423 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~-~g~~vavK~~~~~----------~~~~~~~f~~Ei~~l~~-l~H~niv~l~~~~~~ 423 (662)
+|+..+.||+|+||.||+|.... .+..+|+|.+... ......++..|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778899999999999999976 6788999987532 22334567889988875 799999999999999
Q ss_pred cCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEee
Q 040242 424 QDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGD 503 (662)
Q Consensus 424 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 503 (662)
++..+++|||+++++|.+++..... ....+++..++.++.|++.||.|||+. .+++|+||+|+||+++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKE-KKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999999998854221 135688999999999999999999962 6799999999999999999999999
Q ss_pred ccccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcC
Q 040242 504 FGLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQG 583 (662)
Q Consensus 504 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~ 583 (662)
||++....... ......|+..|+|||.+.++.++.++||||||+++|||++|+.||........ .... .++
T Consensus 158 fg~~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~------~~~~-~~~ 228 (269)
T cd08528 158 FGLAKQKQPES--KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSL------ATKI-VEA 228 (269)
T ss_pred ccceeeccccc--ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHH------HHHH-hhc
Confidence 99998765432 33345688999999999988899999999999999999999999865432211 1111 111
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 584 QITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 584 ~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
.. .+.. .......+.+++.+||+.||++||++.||..+++
T Consensus 229 ~~----~~~~---~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 229 VY----EPLP---EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred cC----CcCC---cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 11 0111 1123456888999999999999999999999875
No 252
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=3.1e-35 Score=300.64 Aligned_cols=252 Identities=29% Similarity=0.497 Sum_probs=204.3
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch--hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR--QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+|+..+.||+|++|.||+|....++..|++|.+..... ...+.+.+|+.++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 47788999999999999999988899999999876544 3677899999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++... ..+++..+..++.+++.||.|||+ .+++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~ 152 (264)
T cd06626 81 CSGGTLEELLEHG-----RILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN 152 (264)
T ss_pred CCCCcHHHHHhhc-----CCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCC
Confidence 9999999998542 347889999999999999999999 89999999999999999999999999999876543
Q ss_pred CCCcc---eecccCCcccCcccccCCC---CCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcccc
Q 040242 514 INPQT---THIVGTLGYLAPELTRTGK---ATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITR 587 (662)
Q Consensus 514 ~~~~~---~~~~gt~~y~aPE~~~~~~---~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 587 (662)
..... ....++..|+|||++.... .+.++||||||++++||++|+.||.......... ..+. .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~--~~~~---------~ 221 (264)
T cd06626 153 TTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIM--FHVG---------A 221 (264)
T ss_pred CCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHH--HHHh---------c
Confidence 22211 1346788999999988766 8899999999999999999999997543221110 0000 0
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 588 AIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 588 ~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
...+.+.. .......+.+++.+||+.+|.+||++.++++
T Consensus 222 ~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 222 GHKPPIPD-SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred CCCCCCCc-ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11111211 1122556778999999999999999999875
No 253
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-36 Score=291.19 Aligned_cols=252 Identities=24% Similarity=0.365 Sum_probs=207.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--------hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccC
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--------RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQD 425 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--------~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~ 425 (662)
+.|...+.||.|..+.|-++..+.+|...|+|++.... .+-.+.-..|+.+|+++ -||+|+++.+.++.+.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s 96 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA 96 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc
Confidence 45777889999999999999999999999999985431 22244567899999998 6999999999999999
Q ss_pred eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecc
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFG 505 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 505 (662)
..++|+|.|+.|.|.++|.. .-.++++...+|++|+.+|+.|||. ..|+||||||+|||++++.++||+|||
T Consensus 97 F~FlVFdl~prGELFDyLts-----~VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFG 168 (411)
T KOG0599|consen 97 FVFLVFDLMPRGELFDYLTS-----KVTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFG 168 (411)
T ss_pred hhhhhhhhcccchHHHHhhh-----heeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccc
Confidence 99999999999999999943 4579999999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCCCcceecccCCcccCcccccC------CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHH
Q 040242 506 LARAYDHNINPQTTHIVGTLGYLAPELTRT------GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVREL 579 (662)
Q Consensus 506 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~ 579 (662)
.++.+..+. .....+||++|+|||.+.. ..|+...|+|++||++|.|+.|.+||........ -.+
T Consensus 169 Fa~~l~~Ge--kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlM-------LR~ 239 (411)
T KOG0599|consen 169 FACQLEPGE--KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLM-------LRM 239 (411)
T ss_pred eeeccCCch--hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHH-------HHH
Confidence 999877653 4556799999999998753 3578899999999999999999999986543211 111
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 580 HSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 580 ~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
..+|+. +.-. ..-.+......+|+.+||+.||.+|-|.+|++.+
T Consensus 240 ImeGky-qF~s----peWadis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 240 IMEGKY-QFRS----PEWADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred HHhccc-ccCC----cchhhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 122221 1111 1123445667899999999999999999999973
No 254
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.6e-35 Score=310.21 Aligned_cols=256 Identities=27% Similarity=0.433 Sum_probs=202.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCc----EEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGL----EVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~----~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
++|+..+.||+|+||.||+|.+..++. .||+|.+.... .....++.+|+.++++++||||++++++|... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 457778999999999999999866665 47889886543 23345788999999999999999999999754 4679
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
++||+++|+|.+++... ...+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 86 v~e~~~~g~l~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 86 VTQLMPHGCLLDYVHEH----KDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred eehhcCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEcccccccc
Confidence 99999999999998643 3458899999999999999999999 8999999999999999999999999999987
Q ss_pred ccCCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCcccc
Q 040242 510 YDHNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITR 587 (662)
Q Consensus 510 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 587 (662)
....... ......++..|+|||.+.+..++.++|||||||++|||++ |+.||...... ...+++. .+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~---~~~~~~~----~~~--- 228 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTR---EIPDLLE----KGE--- 228 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHH---HHHHHHH----CCC---
Confidence 6533221 1222345678999999988889999999999999999997 88998654321 1222221 111
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCC
Q 040242 588 AIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDA 633 (662)
Q Consensus 588 ~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~ 633 (662)
.+ .........+..++..||..+|++||++.++++.|....
T Consensus 229 ----~~-~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 229 ----RL-PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA 269 (303)
T ss_pred ----CC-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 01 001123356788999999999999999999999987643
No 255
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.8e-35 Score=339.99 Aligned_cols=258 Identities=22% Similarity=0.352 Sum_probs=202.3
Q ss_pred HhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEec--cCee
Q 040242 352 SATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRK--QDEL 427 (662)
Q Consensus 352 ~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~--~~~~ 427 (662)
...++|.+.+.||+|+||+||++.+..++..||+|.+... .......|..|+.++.+|+||||+++++++.. ...+
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 3456899999999999999999999989999999998653 33445678999999999999999999998754 3568
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcC----CCCEEeCCcCCCceEeCCC-------
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEEC----DQRVVHRDVKPSNVLIDAD------- 496 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~----~~~ivH~Dlkp~NIll~~~------- 496 (662)
++||||+++|+|.++|..... ....+++..++.|+.||+.||.|||+.. ..+|+||||||+||||+.+
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~-~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYK-MFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 999999999999999964321 1346999999999999999999999842 1459999999999999643
Q ss_pred ----------CCeEEeeccccccccCCCCCcceecccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 040242 497 ----------LNPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRT--GKATTSTDVFGFGTLMLEVACGRRPIEPQ 564 (662)
Q Consensus 497 ----------~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~t~ksDV~S~Gvvl~elltG~~p~~~~ 564 (662)
..+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||+||||++|+.||...
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s--~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~ 246 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIES--MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA 246 (1021)
T ss_pred cccccccCCCCceEEccCCccccccccc--cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 348999999998654321 2234578999999998854 45889999999999999999999999754
Q ss_pred cchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 565 RTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 565 ~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
..... .+... ..+ +.+. .......+.+|+..||+.+|.+||++.|+++
T Consensus 247 ~~~~q-----li~~l-k~~-------p~lp--i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 247 NNFSQ-----LISEL-KRG-------PDLP--IKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CcHHH-----HHHHH-hcC-------CCCC--cCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 33211 11111 111 1110 0122456888999999999999999999995
No 256
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.7e-35 Score=306.28 Aligned_cols=262 Identities=27% Similarity=0.396 Sum_probs=208.1
Q ss_pred cchHHHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcc-ccccceeeeeeEec
Q 040242 345 FRYSELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRK 423 (662)
Q Consensus 345 ~~~~el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~ 423 (662)
.++.++..+.+.|+..+.||+|+||.||+|....+++.+|+|.+.... ....++..|+.++.++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 466777778899999999999999999999998889999999986553 3345688899999998 69999999999853
Q ss_pred ------cCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCC
Q 040242 424 ------QDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADL 497 (662)
Q Consensus 424 ------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~ 497 (662)
....+++|||+++|+|.+++.... ...+++..+..++.|+++||.|||+ .+++|+||+|+||++++++
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK---GNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVLLTENA 158 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCC
Confidence 457899999999999999986432 3457888899999999999999999 8999999999999999999
Q ss_pred CeEEeeccccccccCCCCCcceecccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHH
Q 040242 498 NPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTR-----TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVL 572 (662)
Q Consensus 498 ~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l 572 (662)
.++|+|||++........ ......|+..|+|||.+. ...++.++|||||||++|||++|+.||..........
T Consensus 159 ~~~l~dfg~~~~~~~~~~-~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~- 236 (282)
T cd06636 159 EVKLVDFGVSAQLDRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF- 236 (282)
T ss_pred CEEEeeCcchhhhhcccc-CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh-
Confidence 999999999886543221 223356889999999875 3457889999999999999999999996543221111
Q ss_pred HHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 573 VDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 573 ~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
. ......+.+ ........+.+++.+||+.||.+||++.|++++
T Consensus 237 -----~------~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 237 -----L------IPRNPPPKL--KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred -----h------HhhCCCCCC--cccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 0 001111111 112244578899999999999999999999753
No 257
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.6e-35 Score=308.57 Aligned_cols=247 Identities=24% Similarity=0.391 Sum_probs=202.6
Q ss_pred ccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCC
Q 040242 359 EKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGS 438 (662)
Q Consensus 359 ~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gs 438 (662)
....||+|+||.||++....++..||||++........+.+.+|+..+++++|+||+++++.+...+..++||||+++++
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 105 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA 105 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence 34679999999999999988899999999977666666788999999999999999999999999999999999999999
Q ss_pred cchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcc
Q 040242 439 LDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQT 518 (662)
Q Consensus 439 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~ 518 (662)
|.+++.. ..+++.++..++.||+.||.|||+ .+++||||||+||++++++.++|+|||++....... ...
T Consensus 106 L~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-~~~ 175 (292)
T cd06658 106 LTDIVTH------TRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-PKR 175 (292)
T ss_pred HHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc-ccC
Confidence 9998842 347899999999999999999999 899999999999999999999999999987654322 222
Q ss_pred eecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCH
Q 040242 519 THIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDP 598 (662)
Q Consensus 519 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~ 598 (662)
....|+..|+|||.+.+..++.++||||||+++|||++|+.||.......... -+ ...+.+.+.. ..
T Consensus 176 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~---~~---------~~~~~~~~~~-~~ 242 (292)
T cd06658 176 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMR---RI---------RDNLPPRVKD-SH 242 (292)
T ss_pred ceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH---HH---------HhcCCCcccc-cc
Confidence 33568899999999988889999999999999999999999997543221110 01 1111222211 11
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 599 QEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 599 ~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.....+..++.+|++.||.+||++++++++
T Consensus 243 ~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 243 KVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 234467788899999999999999999985
No 258
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.8e-35 Score=300.05 Aligned_cols=251 Identities=24% Similarity=0.384 Sum_probs=199.9
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc-----chhhHHHHHHHHHHhhccccccceeeeeeEecc--Cee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-----SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ--DEL 427 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-----~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~--~~~ 427 (662)
++|+..++||+|+||.||+|....++..||||.+... .....+.+.+|+.++++++|+||+++++++... ..+
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4688899999999999999999888999999988542 123456788999999999999999999988664 467
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccc
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLA 507 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla 507 (662)
+++|||+++++|.+++... ..+++...++++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||++
T Consensus 82 ~~v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~Dfg~~ 153 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSY-----GALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLGDFGAS 153 (265)
T ss_pred EEEEEecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEECcCccc
Confidence 8999999999999998532 347888899999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCC--CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcc
Q 040242 508 RAYDHNIN--PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQI 585 (662)
Q Consensus 508 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 585 (662)
+....... .......++..|+|||.+.+..++.++|||||||++|||++|+.||......... ....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~------~~~~----- 222 (265)
T cd06652 154 KRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAI------FKIA----- 222 (265)
T ss_pred cccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHH------HHHh-----
Confidence 86543211 1122345889999999998888999999999999999999999999754322111 0100
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 586 TRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 586 ~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
..+.....+......+..++.+|+. +|++||++++|+++
T Consensus 223 ---~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 223 ---TQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred ---cCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 0111112234455667788888984 99999999999864
No 259
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.1e-35 Score=324.23 Aligned_cols=261 Identities=21% Similarity=0.221 Sum_probs=198.5
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
..+|...+.||+|+||.||++.+...++.||||.... ..+.+|+.++++++|+||+++++++...+..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 3578889999999999999999998899999996432 3456899999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+ .++|..++... ...++|.+++.++.|+++||.|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 242 ~-~~~L~~~l~~~----~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~ 313 (461)
T PHA03211 242 Y-RSDLYTYLGAR----LRPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFARGS 313 (461)
T ss_pred c-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecccc
Confidence 9 57888887543 3469999999999999999999999 89999999999999999999999999999865433
Q ss_pred CCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccch-----hhHHHHHHHHHHhhc-Cccc
Q 040242 514 INP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTA-----MELVLVDWVRELHSQ-GQIT 586 (662)
Q Consensus 514 ~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~-----~~~~l~~~~~~~~~~-~~~~ 586 (662)
... ......||..|+|||++.+..++.++|||||||+||||++|..|+...... ....+...+...-.. ....
T Consensus 314 ~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~ 393 (461)
T PHA03211 314 WSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFP 393 (461)
T ss_pred cccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCC
Confidence 211 222356999999999999889999999999999999999988765422110 111111111111000 0000
Q ss_pred cc----------------cCCCC-C-CC--CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 587 RA----------------IDPTL-D-YF--DPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 587 ~~----------------id~~l-~-~~--~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.. ..+.. . .. .......+.+|+.+||+.||.+|||+.|++++
T Consensus 394 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 394 QHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 00 00000 0 00 00122357789999999999999999999975
No 260
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=9.7e-36 Score=308.45 Aligned_cols=265 Identities=29% Similarity=0.408 Sum_probs=203.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
++|+..++||+|++|.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46788899999999999999998889999999886542 2235678899999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|+++++|..+... ...++|.++..++.|+++||.|||+ .+++|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 81 FVDHTVLDDLEKY-----PNGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 152 (286)
T ss_pred cCCccHHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence 9999999887643 2348999999999999999999999 8999999999999999999999999999987644
Q ss_pred CCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH-HHHHHH-------HHhhcC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV-LVDWVR-------ELHSQG 583 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~~-------~~~~~~ 583 (662)
.. .......++..|+|||++.+ ..++.++||||||+++|||++|+.||.......... +..+.. ..+...
T Consensus 153 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07846 153 PG-EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKN 231 (286)
T ss_pred Cc-cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccc
Confidence 32 22233457899999998865 347889999999999999999999987543221111 111100 000000
Q ss_pred ccc-cccCCCCC------CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 584 QIT-RAIDPTLD------YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 584 ~~~-~~id~~l~------~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
... ....+... ...+.....+.+++.+||+.+|++||++.+++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 232 PLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 000 00011110 0112335678899999999999999999999864
No 261
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=3e-35 Score=311.52 Aligned_cols=262 Identities=21% Similarity=0.263 Sum_probs=196.6
Q ss_pred ccceeeee--CceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 359 EKNLVGSG--GFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 359 ~~~~LG~G--~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
..++||+| +|++||++....+|+.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35789999 78999999999999999999996542 333456778999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++|+|.+++.... ...+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.++++||+.........
T Consensus 82 ~~~~l~~~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~ 155 (327)
T cd08227 82 AYGSAKDLICTHF---MDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHG 155 (327)
T ss_pred CCCcHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhcccccc
Confidence 9999999985432 3458999999999999999999999 899999999999999999999999998654332111
Q ss_pred C------CcceecccCCcccCcccccC--CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhh-----
Q 040242 515 N------PQTTHIVGTLGYLAPELTRT--GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHS----- 581 (662)
Q Consensus 515 ~------~~~~~~~gt~~y~aPE~~~~--~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~----- 581 (662)
. .......++..|+|||++.+ ..++.++|||||||++|||++|+.||....... ...........
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~ 233 (327)
T cd08227 156 QRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKLNGTVPCLLDT 233 (327)
T ss_pred ccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhH--HHHHHhcCCccccccc
Confidence 0 01112346778999999875 358899999999999999999999997532211 11000000000
Q ss_pred ---------cCccccccCCCC------------------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 582 ---------QGQITRAIDPTL------------------DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 582 ---------~~~~~~~id~~l------------------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
........+... ..........+.+++.+||+.||++|||+.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 234 TTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred cchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 000000000000 01122334578899999999999999999999973
No 262
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.6e-35 Score=306.67 Aligned_cols=263 Identities=27% Similarity=0.371 Sum_probs=201.1
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+|+..+.||+|++|.||+|+...++..||||++.... ......+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999998889999999886542 22345788999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+. ++|.+++.... ...+++.++..++.|+++||+|||+ .+++|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~~-~~l~~~~~~~~---~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~ 153 (284)
T cd07860 81 LH-QDLKKFMDASP---LSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 153 (284)
T ss_pred cc-cCHHHHHHhCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 95 68888886543 3568999999999999999999999 89999999999999999999999999998865433
Q ss_pred CCCcceecccCCcccCcccccCCC-CCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhc----------
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGK-ATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQ---------- 582 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~-~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---------- 582 (662)
.. ......++..|+|||.+.+.. ++.++|||||||++|||+||+.||........ +.......-..
T Consensus 154 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07860 154 VR-TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ--LFRIFRTLGTPDEVVWPGVTS 230 (284)
T ss_pred cc-ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHHHHhCCCChhhhhhhhH
Confidence 21 122335688999999876544 68899999999999999999999975432211 11111100000
Q ss_pred -----CccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 583 -----GQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 583 -----~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
....+.....+....+.....+.+++.+|++.||++||++++++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 231 LPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred HHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0000000001101111223456789999999999999999999864
No 263
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4.7e-35 Score=306.84 Aligned_cols=256 Identities=23% Similarity=0.277 Sum_probs=203.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|+||.||++.....++.|++|.+.... ....+.+.+|+.+++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999999889999999987653 234567889999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++++|.+++... ..+++..+..++.|+++||.|||+ .+++||||||+||+++.++.+||+|||+++...
T Consensus 81 e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~ 152 (305)
T cd05609 81 EYVEGGDCATLLKNI-----GALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGL 152 (305)
T ss_pred ecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccC
Confidence 999999999999542 458899999999999999999999 899999999999999999999999999987421
Q ss_pred CCCC--------------CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHH
Q 040242 512 HNIN--------------PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVR 577 (662)
Q Consensus 512 ~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~ 577 (662)
.... .......++..|+|||.+.+..++.++|||||||++|||++|+.||....... +..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~------~~~ 226 (305)
T cd05609 153 MSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEE------LFG 226 (305)
T ss_pred cCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH------HHH
Confidence 1100 01112357889999999988889999999999999999999999997543221 111
Q ss_pred HHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 578 ELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 578 ~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
.... + ....+.. .......+.+++.+||+.+|++||++.++.+.|+.
T Consensus 227 ~~~~-~---~~~~~~~---~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 227 QVIS-D---DIEWPEG---DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHHh-c---ccCCCCc---cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 1110 0 0011111 11244567899999999999999997666665554
No 264
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=3.3e-35 Score=302.30 Aligned_cols=255 Identities=27% Similarity=0.463 Sum_probs=201.8
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch----------hhHHHHHHHHHHhhccccccceeeeeeEeccC
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR----------QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD 425 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~----------~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~ 425 (662)
+|...+.||+|++|.||+|....+++.||+|.+..... ...+.+..|+.++++++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 35667899999999999999988899999998854211 12346788999999999999999999999999
Q ss_pred eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecc
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFG 505 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 505 (662)
..++||||+++++|.+++... ..+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.++|+|||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~ 153 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY-----GRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFG 153 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeecc
Confidence 999999999999999998543 458899999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCCC-cceecccCCcccCcccccCCC--CCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhc
Q 040242 506 LARAYDHNINP-QTTHIVGTLGYLAPELTRTGK--ATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQ 582 (662)
Q Consensus 506 la~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~--~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 582 (662)
+++........ ......++..|+|||.+.... ++.++||||||+++|||++|+.|+........ ..+....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~------~~~~~~~ 227 (272)
T cd06629 154 ISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAA------MFKLGNK 227 (272)
T ss_pred ccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHH------HHHhhcc
Confidence 99865432211 123346889999999887654 78999999999999999999999864332111 1111111
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 583 GQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 583 ~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.....+.+ .........+.+++.+|++.+|++||++.+|+++
T Consensus 228 -~~~~~~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 228 -RSAPPIPP---DVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred -ccCCcCCc---cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 11111111 1222345678889999999999999999999875
No 265
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=2.3e-35 Score=310.82 Aligned_cols=199 Identities=25% Similarity=0.403 Sum_probs=161.9
Q ss_pred cceeeeeCceEEEEEEeC--CCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEec--cCeeeEEEeccC
Q 040242 360 KNLVGSGGFGKVYRGVIP--STGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRK--QDELLLVYDYVP 435 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~--~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~--~~~~~lV~E~~~ 435 (662)
.++||+|+||+||+|+.. .++..||+|.+.... ....+.+|+.++++++||||+++++++.. ....+++|||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999975 356889999986542 23456789999999999999999998854 456899999995
Q ss_pred CCCcchhcccccc----cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEe----CCCCCeEEeecccc
Q 040242 436 NGSLDKLLFDNDQ----QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLI----DADLNPKLGDFGLA 507 (662)
Q Consensus 436 ~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kL~DfGla 507 (662)
++|.+++..... .+...+++.....++.|++.||.|||+ .+|+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 588877753221 112358899999999999999999999 899999999999999 45678999999999
Q ss_pred ccccCCCCC--cceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 040242 508 RAYDHNINP--QTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQ 564 (662)
Q Consensus 508 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~ 564 (662)
+........ ......||+.|+|||++.+. .++.++||||+||++|||++|+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 876543221 22345789999999988764 5889999999999999999999999643
No 266
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=4.7e-35 Score=299.96 Aligned_cols=250 Identities=24% Similarity=0.427 Sum_probs=200.6
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc------hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS------RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~------~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
+|...+.||+|+||+||+|.. .++..+|+|.+.... ....+.+.+|+.++++++|+||++++++|...+..++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l 79 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI 79 (265)
T ss_pred CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence 467788999999999999987 468899999886432 2334568899999999999999999999999999999
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
||||+++++|.+++.+. ..+++..+..++.|++.||.|||+ .+++|+||+|+||++++++.++|+|||++..
T Consensus 80 v~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~ 151 (265)
T cd06631 80 FMEFVPGGSISSILNRF-----GPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARR 151 (265)
T ss_pred EEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHh
Confidence 99999999999999532 357899999999999999999998 8999999999999999999999999999886
Q ss_pred ccCCC-----CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCc
Q 040242 510 YDHNI-----NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQ 584 (662)
Q Consensus 510 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 584 (662)
..... ........++..|+|||.+.+..++.++|||||||++|||++|+.||.......... ... .
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~---~~~---~--- 222 (265)
T cd06631 152 LAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMF---YIG---A--- 222 (265)
T ss_pred hhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHH---Hhh---h---
Confidence 53211 111223468899999999988889999999999999999999999997543221110 000 0
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 585 ITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 585 ~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
.....+.+ +......+..++++||+.+|++||++.++++
T Consensus 223 -~~~~~~~~---~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 223 -HRGLMPRL---PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred -ccCCCCCC---CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00111122 2234566788999999999999999999985
No 267
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.2e-35 Score=300.65 Aligned_cols=248 Identities=27% Similarity=0.451 Sum_probs=199.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|+..+.||+|+||.||++.. +++.||+|.+.... ....+.+|+.++++++|||++++++++..+ ..++||||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 4578889999999999999976 67789999986543 345788999999999999999999998664 479999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.... ...+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 81 ~~~~L~~~l~~~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~ 154 (254)
T cd05083 81 SKGNLVNFLRTRG---RALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV 154 (254)
T ss_pred CCCCHHHHHHhcC---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccC
Confidence 9999999996542 3458899999999999999999998 899999999999999999999999999987643221
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
.....+..|+|||.+.++.++.++|||||||++|||++ |+.||....... +.. ....+. ..+
T Consensus 155 ----~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~---~~~----~~~~~~---~~~--- 217 (254)
T cd05083 155 ----DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKE---VKE----CVEKGY---RME--- 217 (254)
T ss_pred ----CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHH---HHH----HHhCCC---CCC---
Confidence 12234578999999988889999999999999999997 999987543221 111 111111 011
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
.....+..+.+++.+||+.+|++||++.++++.|+++
T Consensus 218 --~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 254 (254)
T cd05083 218 --PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEKE 254 (254)
T ss_pred --CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHccC
Confidence 1123346678999999999999999999999998753
No 268
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-35 Score=311.42 Aligned_cols=251 Identities=25% Similarity=0.326 Sum_probs=212.4
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh---hHHHHHHHHHHhhccc-cccceeeeeeEeccCeeeE
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ---GMKEFVAEITSMGRLR-HRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~---~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~l 429 (662)
...|+..+.||+|.||.||+++.+.+|+.+|+|.+.+.... ....+.+|+.+|+++. |||||++.+.++....+++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 35677789999999999999999999999999999776432 3468899999999998 9999999999999999999
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC----CCeEEeecc
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD----LNPKLGDFG 505 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~----~~~kL~DfG 505 (662)
|||++.||.|.+.+... .++......++.|++.++.|||+ .+|+||||||+|+|+... +.+|++|||
T Consensus 114 vmEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 99999999999999543 28899999999999999999999 999999999999999643 479999999
Q ss_pred ccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcc
Q 040242 506 LARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQI 585 (662)
Q Consensus 506 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 585 (662)
++..... .......+||+.|+|||++....++.++||||+||++|.|++|..||.......... ....++.
T Consensus 185 la~~~~~--~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~-------~i~~~~~ 255 (382)
T KOG0032|consen 185 LAKFIKP--GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL-------AILRGDF 255 (382)
T ss_pred CceEccC--CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------HHHcCCC
Confidence 9998776 345566899999999999998999999999999999999999999998765432211 1111221
Q ss_pred ccccCCCC-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 586 TRAIDPTL-DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 586 ~~~id~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.. ...-......+.+++..|+..||.+|+|+.+++++
T Consensus 256 ------~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 256 ------DFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ------CCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11 22333456778889999999999999999999994
No 269
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=5.5e-35 Score=304.63 Aligned_cols=263 Identities=25% Similarity=0.386 Sum_probs=212.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
++|...+.||+|+||.||++....++..|++|.+........+.+.+|+.++++++|||++++++.+...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 57888899999999999999988888999999987655555677899999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++.+ ..+++.++..++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++.......
T Consensus 99 ~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~ 169 (293)
T cd06647 99 AGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (293)
T ss_pred CCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCcceecccccc
Confidence 99999999843 347889999999999999999999 899999999999999999999999999887654332
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
. ......+++.|+|||.+..+.++.++|||||||++||+++|+.||.......... .....+ .+..
T Consensus 170 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~------~~~~~~------~~~~- 235 (293)
T cd06647 170 S-KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY------LIATNG------TPEL- 235 (293)
T ss_pred c-ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhee------ehhcCC------CCCC-
Confidence 2 2223468889999999988889999999999999999999999997543321110 000000 0111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhcCCCCCCCCC
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF--LLRDASLPQAPL 640 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~--L~~~~~~p~~p~ 640 (662)
.........+.+++.+||+.+|++||++.+++++ +....++...|+
T Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~~~ 283 (293)
T cd06647 236 QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSLTP 283 (293)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcccccccc
Confidence 1122345568889999999999999999999985 455555544443
No 270
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2e-35 Score=308.58 Aligned_cols=247 Identities=24% Similarity=0.381 Sum_probs=201.8
Q ss_pred ccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCC
Q 040242 359 EKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGS 438 (662)
Q Consensus 359 ~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gs 438 (662)
....||+|+||.||++....++..||+|++........+.+.+|+.++..++||||+++++++..++..++||||+++++
T Consensus 25 ~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 25 NYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 34579999999999999988899999999976555556778899999999999999999999999999999999999999
Q ss_pred cchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcc
Q 040242 439 LDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQT 518 (662)
Q Consensus 439 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~ 518 (662)
|..++. ...+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++....... ...
T Consensus 105 L~~~~~------~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~ 174 (297)
T cd06659 105 LTDIVS------QTRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKR 174 (297)
T ss_pred HHHHHh------hcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhccccc-ccc
Confidence 999873 2458899999999999999999999 899999999999999999999999999987654332 122
Q ss_pred eecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCH
Q 040242 519 THIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDP 598 (662)
Q Consensus 519 ~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~ 598 (662)
....|+..|+|||++.+..++.++|||||||+++||++|+.||......... ..+. .. ..+.. ....
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~---~~~~----~~-----~~~~~-~~~~ 241 (297)
T cd06659 175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAM---KRLR----DS-----PPPKL-KNAH 241 (297)
T ss_pred cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHh----cc-----CCCCc-cccC
Confidence 3356889999999998888999999999999999999999999754332111 1111 00 00111 1111
Q ss_pred HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 599 QEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 599 ~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.....+.+++.+|++.+|.+||++.+++++
T Consensus 242 ~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 242 KISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 234557889999999999999999999984
No 271
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.1e-35 Score=301.90 Aligned_cols=261 Identities=23% Similarity=0.355 Sum_probs=205.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEecc--CeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ--DELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~lV~ 431 (662)
++|...+.||.|++|.||++.+..++..+|+|.+.... .....++.+|++++++++||||++++++|... +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 36788899999999999999998889999999987543 34457789999999999999999999988654 3689999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++++|.+++..... ....+++.....++.|+++||.|||+ .+++|+||+|+||+++.++.++|+|||++....
T Consensus 81 e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 81 EYCEGGSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EecCCCCHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 99999999998754321 24568889999999999999999999 899999999999999999999999999987543
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccc--hhhHHHHHHHHHHhhcCcccccc
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRT--AMELVLVDWVRELHSQGQITRAI 589 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~--~~~~~l~~~~~~~~~~~~~~~~i 589 (662)
... .....++..|+|||.+.+..++.++|||||||++|||++|+.||..... .....+..|+... . ...+
T Consensus 157 ~~~---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~-~~~~ 228 (287)
T cd06621 157 NSL---AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM----P-NPEL 228 (287)
T ss_pred ccc---cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC----C-chhh
Confidence 322 1234578899999999888899999999999999999999999975532 1112222222210 0 0011
Q ss_pred CCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 590 DPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 590 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.... .........+.+++.+||+.+|++|||+.||+++
T Consensus 229 ~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 229 KDEP-GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred ccCC-CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 1111 1112245678899999999999999999999983
No 272
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=6.6e-35 Score=299.09 Aligned_cols=254 Identities=24% Similarity=0.410 Sum_probs=205.0
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc------hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS------RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~------~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
+|+..+.||+|++|.||++....++..||+|.+.... ....+.+..|+.++++++|+||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4777899999999999999998899999999986532 2245788999999999999999999999999999999
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCC-CeEEeeccccc
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADL-NPKLGDFGLAR 508 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~DfGla~ 508 (662)
||||+++++|.+++.+ ...+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++ .+||+|||++.
T Consensus 81 v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~ 152 (268)
T cd06630 81 FVEWMAGGSVSHLLSK-----YGAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAA 152 (268)
T ss_pred EEeccCCCcHHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccccccc
Confidence 9999999999999853 3468899999999999999999999 8999999999999998776 59999999998
Q ss_pred cccCCCCC---cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcc
Q 040242 509 AYDHNINP---QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQI 585 (662)
Q Consensus 509 ~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 585 (662)
........ ......++..|+|||.+.+..++.++||||+|+++++|++|+.||.......... .......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~---~~~~~~~---- 225 (268)
T cd06630 153 RLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA---LIFKIAS---- 225 (268)
T ss_pred ccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH---HHHHHhc----
Confidence 76543211 1223467899999999988888999999999999999999999997443221111 1111000
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 586 TRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 586 ~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.. .....+......+.+++.+|++.+|++||++.+++++
T Consensus 226 -~~---~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 226 -AT---TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred -cC---CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 00 0122334456778899999999999999999999853
No 273
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=4e-35 Score=305.02 Aligned_cols=265 Identities=23% Similarity=0.327 Sum_probs=200.6
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch-hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR-QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~-~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++++|...+.||+|+||.||+|....++..|++|++..... .....+.+|+.++++++|+||+++.+++..++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 56889999999999999999999988899999999865432 22346788999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+. ++|.+++... ...+++.++..++.|+++||.|||+ .+++|+||||+||+++.++.+||+|||+++...
T Consensus 83 e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 154 (291)
T cd07870 83 EYMH-TDLAQYMIQH----PGGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGLARAKS 154 (291)
T ss_pred eccc-CCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEeccccccccC
Confidence 9995 6777766433 2457888889999999999999999 899999999999999999999999999998643
Q ss_pred CCCCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhc--------
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQ-------- 582 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~-------- 582 (662)
.... ......+++.|+|||.+.+. .++.++|||||||++|||++|+.||.......+.....| .....
T Consensus 155 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 231 (291)
T cd07870 155 IPSQ-TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIW--TVLGVPTEDTWPG 231 (291)
T ss_pred CCCC-CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHH--HHcCCCChhhhhh
Confidence 3211 12233578999999988654 578899999999999999999999975543222111111 10000
Q ss_pred ----Ccccccc-----CCCCCCC--CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 583 ----GQITRAI-----DPTLDYF--DPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 583 ----~~~~~~i-----d~~l~~~--~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.+..... .+.+... .......+.+++.+|+..||.+|||+.|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 232 VSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000000 0000000 00124567789999999999999999998853
No 274
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=6.4e-36 Score=317.08 Aligned_cols=241 Identities=26% Similarity=0.338 Sum_probs=188.8
Q ss_pred eeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhcc---ccccceeeeeeEeccCeeeEEEeccCC
Q 040242 363 VGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRL---RHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 363 LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l---~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
||+|+||+||+|+...++..||||++.... ......+..|..++.+. +||||+++++++......++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999998899999999996542 22234455677776665 699999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|+|.+++.. ...+++.....++.||++||+|||+ .+|+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~l~~-----~~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~ 151 (330)
T cd05586 81 GELFWHLQK-----EGRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-K 151 (330)
T ss_pred ChHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-C
Confidence 999988853 3458899999999999999999999 899999999999999999999999999987543221 2
Q ss_pred cceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDY 595 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 595 (662)
......||..|+|||.+.+. .++.++|||||||++|||++|+.||....... .... ...+. ..+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~------~~~~-i~~~~------~~~~- 217 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ------MYRN-IAFGK------VRFP- 217 (330)
T ss_pred CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH------HHHH-HHcCC------CCCC-
Confidence 22345789999999988654 47899999999999999999999997543211 1111 11111 1111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCC----CHHHHHH
Q 040242 596 FDPQEAELVLTLGLLCCDPHPDFRP----STRRVVQ 627 (662)
Q Consensus 596 ~~~~~~~~l~~l~~~Cl~~dP~~RP----t~~eVl~ 627 (662)
.......+.+++.+||+.||.+|| ++.++++
T Consensus 218 -~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 218 -KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred -CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 112345567889999999999998 4666655
No 275
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.2e-35 Score=314.60 Aligned_cols=259 Identities=22% Similarity=0.318 Sum_probs=198.8
Q ss_pred HhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEecc-----
Q 040242 352 SATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ----- 424 (662)
Q Consensus 352 ~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~----- 424 (662)
...++|+..+.||+|+||.||+|....++..||||++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN 91 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence 34578899999999999999999998889999999986542 23345678999999999999999999987543
Q ss_pred -CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEee
Q 040242 425 -DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGD 503 (662)
Q Consensus 425 -~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 503 (662)
...++++|++ +++|.+++. ...+++..+..++.|+++||.|||+ .+|+||||||+||+++.++.+||+|
T Consensus 92 ~~~~~~~~~~~-~~~l~~~~~------~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~D 161 (343)
T cd07878 92 FNEVYLVTNLM-GADLNNIVK------CQKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILD 161 (343)
T ss_pred cCcEEEEeecC-CCCHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcC
Confidence 3578999998 889988873 2358999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccCCCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhc
Q 040242 504 FGLARAYDHNINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQ 582 (662)
Q Consensus 504 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~ 582 (662)
||+++..... .....||+.|+|||.+.+ ..++.++|||||||++|||++|+.||......... ..+. .....
T Consensus 162 fg~~~~~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~--~~~~-~~~~~ 234 (343)
T cd07878 162 FGLARQADDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQL--KRIM-EVVGT 234 (343)
T ss_pred CccceecCCC----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHH--HHHH-HHhCC
Confidence 9999865432 233468999999998876 46889999999999999999999999754322111 1110 00000
Q ss_pred -----------CccccccCCCCCCCC--------HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 583 -----------GQITRAIDPTLDYFD--------PQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 583 -----------~~~~~~id~~l~~~~--------~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
......+ ..+...+ ......+.+|+.+|++.||.+|||+.|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 235 PSPEVLKKISSEHARKYI-QSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CCHHHHHhcchhhHHHHh-hccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0000000 0000000 1122346789999999999999999999975
No 276
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.4e-35 Score=300.24 Aligned_cols=251 Identities=23% Similarity=0.406 Sum_probs=204.5
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+|+..+.||+|++|.||++....+|..+|+|.+.... ....+.+.+|+.++++++|+||+++++++...+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999999889999999986542 23446788999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCC-eEEeeccccccccC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLN-PKLGDFGLARAYDH 512 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~-~kL~DfGla~~~~~ 512 (662)
+++++|.+++.... ...+++..+..++.|+++||.|||+ .+++|+||||+||++++++. +||+|||.+.....
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 81 CDGGDLMKRINRQR---GVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND 154 (257)
T ss_pred CCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence 99999999986432 3457999999999999999999999 89999999999999998864 69999999987654
Q ss_pred CCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
... ......|++.|+|||...+..++.++||||||++++||++|+.|+...... +++.+... + .
T Consensus 155 ~~~-~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~------~~~~~~~~-~--------~ 218 (257)
T cd08225 155 SME-LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH------QLVLKICQ-G--------Y 218 (257)
T ss_pred Ccc-cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHhc-c--------c
Confidence 322 222346889999999998888999999999999999999999998754321 12222111 1 1
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
...........+.+++.+|++.+|++||++.+++++
T Consensus 219 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 219 FAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 111122334568899999999999999999999864
No 277
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.3e-35 Score=309.35 Aligned_cols=199 Identities=25% Similarity=0.402 Sum_probs=161.6
Q ss_pred cceeeeeCceEEEEEEeCC--CCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEec--cCeeeEEEeccC
Q 040242 360 KNLVGSGGFGKVYRGVIPS--TGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRK--QDELLLVYDYVP 435 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~--~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~--~~~~~lV~E~~~ 435 (662)
.++||+|+||+||+|+... ++..||+|.+.... ....+.+|+.++++++||||+++++++.. +...++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 4689999999999999753 55789999986543 23457789999999999999999998854 457899999996
Q ss_pred CCCcchhcccccc----cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEe----CCCCCeEEeecccc
Q 040242 436 NGSLDKLLFDNDQ----QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLI----DADLNPKLGDFGLA 507 (662)
Q Consensus 436 ~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll----~~~~~~kL~DfGla 507 (662)
++|.+++..... .....+++..+..++.|++.||.|||+ .+|+||||||+||++ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 577777643211 113458899999999999999999999 899999999999999 56678999999999
Q ss_pred ccccCCCCC--cceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 040242 508 RAYDHNINP--QTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQ 564 (662)
Q Consensus 508 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~ 564 (662)
+........ ......||+.|+|||.+.+ ..++.++|||||||++|||+||+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 876543221 2234568999999998876 45789999999999999999999999743
No 278
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.7e-35 Score=304.96 Aligned_cols=262 Identities=25% Similarity=0.344 Sum_probs=199.2
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+|+..+.||+|++|.||+|....+|..||+|++.... ......+.+|+.++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4777899999999999999999899999999986542 22235678899999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
++ ++|.+++... ...+++...+.++.||++||.|||+ .+++||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 152 (284)
T cd07839 81 CD-QDLKKYFDSC----NGDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 152 (284)
T ss_pred CC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCC
Confidence 96 5787777543 3458999999999999999999999 89999999999999999999999999999866443
Q ss_pred CCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcC------ccc
Q 040242 514 INPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQG------QIT 586 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~------~~~ 586 (662)
.. ......++..|+|||.+.+. .++.++|||||||++|||++|+.|+......... ...+....... .+.
T Consensus 153 ~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07839 153 VR-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ--LKRIFRLLGTPTEESWPGVS 229 (284)
T ss_pred CC-CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHH--HHHHHHHhCCCChHHhHHhh
Confidence 22 12234578899999988664 4689999999999999999999986543322111 01111100000 000
Q ss_pred cccC----CCC------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 587 RAID----PTL------DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 587 ~~id----~~l------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+..+ +.. ....+.....+.+++.+||+.||.+|||+.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 230 KLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred hcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0000 000 01112234667889999999999999999999864
No 279
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=8.3e-35 Score=305.26 Aligned_cols=249 Identities=29% Similarity=0.409 Sum_probs=201.0
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
.+.|+..+.||+|++|+||+|....+++.||+|++... ..+..+++.+|++++++++||||++++++|...+..++|
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 35688889999999999999999888999999998643 233446788999999999999999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
|||++ |+|.+++... ...+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||++...
T Consensus 94 ~e~~~-g~l~~~~~~~----~~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~ 165 (307)
T cd06607 94 MEYCL-GSASDILEVH----KKPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLV 165 (307)
T ss_pred HHhhC-CCHHHHHHHc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceec
Confidence 99996 6777766433 3458999999999999999999999 89999999999999999999999999998765
Q ss_pred cCCCCCcceecccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcccc
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTR---TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITR 587 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 587 (662)
... ....++..|+|||.+. ...++.++||||||+++|||++|+.|+.......... .. ...
T Consensus 166 ~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~------~~-~~~---- 229 (307)
T cd06607 166 SPA-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY------HI-AQN---- 229 (307)
T ss_pred CCC-----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHH------HH-hcC----
Confidence 332 2246788999999874 4568899999999999999999999987543221110 00 000
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 588 AIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 588 ~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
..+.+ ........+.+++.+||+.+|++||++.+|+++.
T Consensus 230 -~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 268 (307)
T cd06607 230 -DSPTL--SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHR 268 (307)
T ss_pred -CCCCC--CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcCh
Confidence 01111 1223456789999999999999999999999753
No 280
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=3.5e-35 Score=301.82 Aligned_cols=258 Identities=27% Similarity=0.378 Sum_probs=204.8
Q ss_pred HhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcc-ccccceeeeeeEeccC-----
Q 040242 352 SATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQD----- 425 (662)
Q Consensus 352 ~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~----- 425 (662)
.++++|+..+.||+|++|.||+|....++..+++|++..... ..+++.+|+.+++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 467899999999999999999999988889999999876543 346789999999999 6999999999997644
Q ss_pred -eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 426 -ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 426 -~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
..++||||+++++|.+++..... ....+++..+..++.|+++||.|||+ .+++|+||+|+||++++++.+||+||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~l~d~ 157 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRK-KGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVKLVDF 157 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEEECCC
Confidence 48999999999999999854321 13568999999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCCCcceecccCCcccCcccccC-----CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHH
Q 040242 505 GLARAYDHNINPQTTHIVGTLGYLAPELTRT-----GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVREL 579 (662)
Q Consensus 505 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~ 579 (662)
|++....... .......++..|+|||.+.. ..++.++|||||||+++||++|+.||....... .+...
T Consensus 158 ~~~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~---- 230 (275)
T cd06608 158 GVSAQLDSTL-GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR--ALFKI---- 230 (275)
T ss_pred ccceecccch-hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH--HHHHh----
Confidence 9987654322 22233568899999998753 346789999999999999999999997432211 11110
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 580 HSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 580 ~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.....+.+ .........+.+++.+||..||++|||+.+++++
T Consensus 231 ------~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 231 ------PRNPPPTL-KSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred ------hccCCCCC-CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 00111111 1122345678899999999999999999999863
No 281
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.2e-34 Score=296.04 Aligned_cols=254 Identities=24% Similarity=0.400 Sum_probs=210.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch-hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR-QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~-~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
++|+..+.||+|++|.||++....+++.|+||++..... ...+.+.+|+..+.+++|+|++++++++...+..++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 367888999999999999999988899999999876643 4567899999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++... ..+++..++.++.|+++||.|||+. .+++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~~~L~~~l~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~--~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 81 MDGGSLADLLKKV-----GKIPEPVLAYIARQILKGLDYLHTK--RHIIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred cCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHhcc--CCCccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 9999999999543 5689999999999999999999973 68999999999999999999999999999876543
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
... .....++..|+|||.+.+..++.++||||||+++|||++|+.|+..........+..++. ....
T Consensus 154 ~~~-~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~------------~~~~ 220 (264)
T cd06623 154 LDQ-CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC------------DGPP 220 (264)
T ss_pred CCc-ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh------------cCCC
Confidence 322 223467899999999998889999999999999999999999997654211122222221 1111
Q ss_pred CCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 594 DYFDPQ-EAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 594 ~~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
...+.. ....+..++.+|++.+|++||++.+++++
T Consensus 221 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111222 45678899999999999999999999974
No 282
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=6e-35 Score=303.04 Aligned_cols=250 Identities=23% Similarity=0.360 Sum_probs=204.8
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccC
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVP 435 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 435 (662)
.|...+.||+|++|.||++....++..+++|++........+.+.+|+.++++++|+||+++++++...+..++++||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 35556899999999999999988899999999876655566778999999999999999999999999999999999999
Q ss_pred CCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC
Q 040242 436 NGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN 515 (662)
Q Consensus 436 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~ 515 (662)
+++|.+++.. ..+++.++..++.|++.||.|||+ .+++||||+|+||+++.++.++|+|||++........
T Consensus 100 ~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~ 170 (285)
T cd06648 100 GGALTDIVTH------TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP 170 (285)
T ss_pred CCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc
Confidence 9999999853 348899999999999999999999 8999999999999999999999999998876543321
Q ss_pred CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCC
Q 040242 516 PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDY 595 (662)
Q Consensus 516 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 595 (662)
......|+..|+|||.+.+..++.++|||||||++|||++|+.||....... ...... .. ..+.+.
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~------~~~~~~-~~-----~~~~~~- 236 (285)
T cd06648 171 -RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQ------AMKRIR-DN-----LPPKLK- 236 (285)
T ss_pred -ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHH------HHHHHH-hc-----CCCCCc-
Confidence 2233468899999999988889999999999999999999999987543211 111111 11 111111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 596 FDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 596 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
........+.+++.+||+.+|++||++.+++++
T Consensus 237 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 237 NLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred ccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 112244678999999999999999999999963
No 283
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=5.5e-35 Score=302.46 Aligned_cols=261 Identities=26% Similarity=0.369 Sum_probs=202.5
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEecc--CeeeEEEe
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ--DELLLVYD 432 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~lV~E 432 (662)
|+..+.||+|++|.||+|....++..+|+|++.... ......+.+|+.++++++|+|++++++++... +..++|||
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 566789999999999999998889999999997653 33456788999999999999999999999888 78999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|++ ++|.+++... ...+++.+++.++.|+++||+|||+ .+++|+||+|+||++++++.+||+|||++.....
T Consensus 81 ~~~-~~l~~~~~~~----~~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~ 152 (287)
T cd07840 81 YMD-HDLTGLLDSP----EVKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPYTK 152 (287)
T ss_pred ccc-ccHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeeccC
Confidence 997 4888888543 2468999999999999999999999 8999999999999999999999999999987765
Q ss_pred CCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhc---Cc---c
Q 040242 513 NINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQ---GQ---I 585 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~---~ 585 (662)
..........++..|+|||.+.+ ..++.++||||||+++|||++|+.||.......... .+...... .. .
T Consensus 153 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 229 (287)
T cd07840 153 RNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLE---KIFELCGSPTDENWPGV 229 (287)
T ss_pred CCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH---HHHHHhCCCchhhcccc
Confidence 43323334467889999997654 457899999999999999999999997654322111 11110000 00 0
Q ss_pred -----cc------ccCCCC-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 586 -----TR------AIDPTL-DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 586 -----~~------~id~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.+ .....+ ..+...+...+.+++.+||+.+|++||++++++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 230 SKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred ccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 00 000000 00111125678999999999999999999999864
No 284
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.8e-35 Score=317.73 Aligned_cols=259 Identities=23% Similarity=0.258 Sum_probs=198.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCC--CCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPS--TGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~--~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
.+|...+.||+|+||.||++...+ .+..||+|.+... +...+|+.++++++||||+++++++......++|||
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e 166 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMP 166 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEeh
Confidence 468889999999999999997643 4578999988543 234679999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
++. ++|.+++.. ...+++.+++.++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 167 ~~~-~~l~~~l~~-----~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 167 KYK-CDLFTYVDR-----SGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDA 237 (392)
T ss_pred hcC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence 995 688888732 3568999999999999999999999 8999999999999999999999999999986654
Q ss_pred CCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhh-HHHHHHHHHHhhcCc------
Q 040242 513 NIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAME-LVLVDWVRELHSQGQ------ 584 (662)
Q Consensus 513 ~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~-~~l~~~~~~~~~~~~------ 584 (662)
... .......||+.|+|||++....++.++|||||||++|||++|+.||........ ..+..-++ ......
T Consensus 238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~-~~~~~~~~~~~~ 316 (392)
T PHA03207 238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIR-CMQVHPLEFPQN 316 (392)
T ss_pred ccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHH-HhccCccccCCc
Confidence 322 222345799999999999988899999999999999999999999975432211 11111111 000000
Q ss_pred -----------cccccCCCC--CC--CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 585 -----------ITRAIDPTL--DY--FDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 585 -----------~~~~id~~l--~~--~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
......+.. .. ........+..++.+||+.||++||++.|++.+
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 317 GSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred cchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 000000000 00 001223457788999999999999999999986
No 285
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=3.4e-35 Score=300.72 Aligned_cols=255 Identities=25% Similarity=0.411 Sum_probs=205.8
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
+|+..+.||+|++|.||++.+..+++.+++|++.... ....+++.+|++++++++||||+++++++...+..++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5777889999999999999998889999999987653 345577899999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++++|.+++... ...+++.....++.|+++||.|||+. .+++|+||||+||+++.++.++|+|||.+.......
T Consensus 82 ~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 82 DGGSLDKILKEV----QGRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred CCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 999999998643 25688899999999999999999983 689999999999999999999999999987654321
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
.. ...++..|+|||.+.+..++.++||||||+++++|++|+.|+........ ...+.+...... ..+.+.
T Consensus 156 ~~---~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~------~~~~~~ 225 (265)
T cd06605 156 AK---TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPD-GIFELLQYIVNE------PPPRLP 225 (265)
T ss_pred hh---cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccc-cHHHHHHHHhcC------CCCCCC
Confidence 11 15688899999999888999999999999999999999999975422111 111122111111 011111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.......+.+++.+||..+|++||++.+++++
T Consensus 226 --~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 226 --SGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred --hhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 11145668899999999999999999999864
No 286
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=9.2e-35 Score=300.18 Aligned_cols=247 Identities=25% Similarity=0.412 Sum_probs=202.9
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccC
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVP 435 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 435 (662)
|+..+.||+|+||.||+|....++..||+|.+.... ....+.+.+|+..+++++|+||+++++++..+...++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 566788999999999999998889999999886542 3445678899999999999999999999999999999999999
Q ss_pred CCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC
Q 040242 436 NGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN 515 (662)
Q Consensus 436 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~ 515 (662)
+++|.+++.. ..+++.....++.|++.+|.|||+ .+++|+||+|+||+++.++.++|+|||++.......
T Consensus 86 ~~~l~~~i~~------~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06641 86 GGSALDLLEP------GPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred CCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecccch-
Confidence 9999999842 358899999999999999999999 899999999999999999999999999987654321
Q ss_pred CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCC
Q 040242 516 PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDY 595 (662)
Q Consensus 516 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 595 (662)
.......++..|+|||.+.+..++.++|||||||++|||++|..|+....... +.... ..+. ...
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~------~~~~~-~~~~--------~~~ 220 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMK------VLFLI-PKNN--------PPT 220 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHH------HHHHH-hcCC--------CCC
Confidence 12223467889999999988889999999999999999999999987543211 11111 0110 111
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 596 FDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 596 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
........+.+++.+|++.+|.+||++.+++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 221 LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 222345667889999999999999999999985
No 287
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=5.3e-35 Score=304.12 Aligned_cols=245 Identities=26% Similarity=0.324 Sum_probs=202.6
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|+..+.||+|++|.||++....+++.||+|.+.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36888899999999999999998889999999986542 234567889999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++++|.+++... ..+++..+..++.|+++||.|||+ .+++|+||+|+||+++.++.+||+|||++....
T Consensus 81 e~~~~~~L~~~~~~~-----~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 152 (290)
T cd05580 81 EYVPGGELFSHLRKS-----GRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVK 152 (290)
T ss_pred ecCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence 999999999998543 468899999999999999999999 899999999999999999999999999998765
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
.. .....+++.|+|||.+.+...+.++||||||+++|||++|+.||...... ... +....+. .
T Consensus 153 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~----~~~~~~~------~ 215 (290)
T cd05580 153 GR----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPI---QIY----EKILEGK------V 215 (290)
T ss_pred CC----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH---HHH----HHHhcCC------c
Confidence 43 23346889999999998888899999999999999999999999754421 111 1111111 1
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRP-----STRRVVQ 627 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~eVl~ 627 (662)
. .+......+.+++.+||+.+|.+|| +++|+++
T Consensus 216 ~---~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 216 R---FPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred c---CCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 1 1222356778899999999999999 6666664
No 288
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=5.9e-35 Score=302.11 Aligned_cols=254 Identities=26% Similarity=0.366 Sum_probs=197.0
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHH-hhccccccceeeeeeEeccCeeeEEEe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITS-MGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~-l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
++|+..+.||+|+||.||+++...+|+.||+|++.... .....++..|+.. ++.++||||+++++++..++..+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 36888899999999999999998899999999987642 2333456666665 566789999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|++ |+|.+++..... ....+++..++.++.|++.||.|||+. .+++||||||+||+++.++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~l~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYD-KGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 995 788888754322 135689999999999999999999982 2899999999999999999999999999986543
Q ss_pred CCCCcceecccCCcccCcccccC----CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccc
Q 040242 513 NINPQTTHIVGTLGYLAPELTRT----GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRA 588 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~----~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 588 (662)
.. ......++..|+|||.+.+ ..++.++|+|||||++|||++|+.||.......+ .+ .... +.
T Consensus 157 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~-~~----~~~~------~~ 223 (283)
T cd06617 157 SV--AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQ-QL----KQVV------EE 223 (283)
T ss_pred cc--ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHH-HH----HHHH------hc
Confidence 21 1223467889999998754 3468899999999999999999999964322111 11 1110 11
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 589 IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 589 id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
..+.+. .......+.+++.+||..+|++||++.++++
T Consensus 224 ~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 224 PSPQLP--AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred CCCCCC--ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 111111 1123456889999999999999999999997
No 289
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=4.8e-35 Score=302.94 Aligned_cols=262 Identities=28% Similarity=0.374 Sum_probs=201.4
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
|+..+.||.|++|.||+|....+|..|++|++.... ....+.+.+|+.++++++|+|++++++++...+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 566789999999999999998899999999987543 223457889999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
+++|.+++.... ...+++..++.++.|+++||.|||+ .+++||||+|+||+++.++.++|+|||+++......
T Consensus 81 -~~~l~~~~~~~~---~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~ 153 (283)
T cd07835 81 -DLDLKKYMDSSP---LTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV 153 (283)
T ss_pred -CcCHHHHHhhCC---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc
Confidence 578999885442 2468999999999999999999999 899999999999999999999999999998654332
Q ss_pred CCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcC----------
Q 040242 515 NPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQG---------- 583 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~---------- 583 (662)
. ......++..|+|||++.+. .++.++||||||+++|||++|+.||........ +...........
T Consensus 154 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07835 154 R-TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQ--LFRIFRTLGTPDEDVWPGVTSL 230 (283)
T ss_pred c-ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHhCCCChHHhhhhhhc
Confidence 1 11223568899999987654 568899999999999999999999975433211 111111100000
Q ss_pred -c----cccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 584 -Q----ITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 584 -~----~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
. ......+............+.+++.+|++.+|++||+++|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 231 PDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred hhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 00000011111122334668899999999999999999999864
No 290
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.1e-34 Score=299.39 Aligned_cols=249 Identities=27% Similarity=0.435 Sum_probs=202.2
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc-chhhHHHHHHHHHHhhccc---cccceeeeeeEeccCeeeEEE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLR---HRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~---H~niv~l~~~~~~~~~~~lV~ 431 (662)
.|+..+.||+|+||.||+|.+..++..|++|.+... .....+++.+|+.++++++ |||++++++++..+...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 467788999999999999999888999999998654 3344567889999999987 999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++++|.+++.. ..+++...+.++.|+++||.|||+ .+++|+||+|+||+++.++.++|+|||++....
T Consensus 82 e~~~~~~L~~~~~~------~~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06917 82 EYAEGGSVRTLMKA------GPIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALLN 152 (277)
T ss_pred ecCCCCcHHHHHHc------cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeecC
Confidence 99999999998842 368899999999999999999999 899999999999999999999999999998765
Q ss_pred CCCCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
... .......|+..|+|||.+.++ .++.++|||||||++|+|++|+.||........ ... ......
T Consensus 153 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~------~~~------~~~~~~ 219 (277)
T cd06917 153 QNS-SKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRA------MML------IPKSKP 219 (277)
T ss_pred CCc-cccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhh------hhc------cccCCC
Confidence 443 222334688999999988654 468899999999999999999999975432111 100 001111
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+.+.. ......+.+++.+||+.||++||++.+++++
T Consensus 220 ~~~~~--~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 220 PRLED--NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCCc--ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 22211 1144568889999999999999999999873
No 291
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=6.1e-35 Score=306.97 Aligned_cols=269 Identities=22% Similarity=0.322 Sum_probs=200.8
Q ss_pred CCcccceeeeeCceEEEEEEeCC--CCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEecc--Ceee
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPS--TGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ--DELL 428 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~--~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~ 428 (662)
+|+..+.||+|++|.||+|+... .+..||+|.+.... ....+.+.+|+.++++++||||+++++++... ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 47778899999999999999987 78999999997633 33446678899999999999999999999888 7899
Q ss_pred EEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCC----CCCeEEeec
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDA----DLNPKLGDF 504 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~----~~~~kL~Df 504 (662)
+||||+++ +|.+++..........++....+.++.|++.||.|||+ .+++||||||+||+++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999964 67666644332223468899999999999999999999 89999999999999999 899999999
Q ss_pred cccccccCCCC--CcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchh-------hHHHHH
Q 040242 505 GLARAYDHNIN--PQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAM-------ELVLVD 574 (662)
Q Consensus 505 Gla~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~-------~~~l~~ 574 (662)
|++........ .......++..|+|||.+.+. .++.++|||||||+++||++|+.||....... ...+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99987654322 122234678899999987654 57899999999999999999999997543321 001111
Q ss_pred HHHHHh-----------hcCccccccCC-CCCCCC---------H--HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 575 WVRELH-----------SQGQITRAIDP-TLDYFD---------P--QEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 575 ~~~~~~-----------~~~~~~~~id~-~l~~~~---------~--~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.+..+- .........+. ....++ . .....+.+++.+||+.||++|||+.|++++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 111000 00000000000 000011 0 234568899999999999999999999864
No 292
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.8e-35 Score=303.16 Aligned_cols=263 Identities=25% Similarity=0.348 Sum_probs=198.7
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch-hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR-QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~-~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
++|+..+.||+|++|.||+|....+++.||+|.+..... .....+.+|++++++++|+||+++++++..++..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 578889999999999999999988899999999865432 2234567899999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
++ ++|.+++... ...+++.....++.|+++||.|||+ .+++||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~-~~L~~~~~~~----~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 85 LD-TDLKQYMDDC----GGGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred CC-CCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 97 4899888644 2368899999999999999999999 89999999999999999999999999998754322
Q ss_pred CCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhc---Ccc----
Q 040242 514 INPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQ---GQI---- 585 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~---~~~---- 585 (662)
... .....++..|+|||.+.+ ..++.++||||+|+++|||++|+.||.......+.. .-+...... ...
T Consensus 157 ~~~-~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 157 SKT-YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQL--HKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred Ccc-ccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHH--HHHHHhcCCCChhhhhhhh
Confidence 111 122346789999998865 457899999999999999999999996543211110 001110000 000
Q ss_pred -----cc----cc-CCCCCCC--CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 586 -----TR----AI-DPTLDYF--DPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 586 -----~~----~i-d~~l~~~--~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.. .. ...+... .......+.+++.+||+.+|++||++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 00 00 0000000 00112567789999999999999999998863
No 293
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=5.6e-35 Score=301.79 Aligned_cols=250 Identities=24% Similarity=0.326 Sum_probs=197.1
Q ss_pred eeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCc
Q 040242 363 VGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL 439 (662)
Q Consensus 363 LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 439 (662)
||+|+||+||++....+|+.||+|.+.... ......+..|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999998889999999986542 22345678899999999999999999999999999999999999999
Q ss_pred chhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcce
Q 040242 440 DKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQTT 519 (662)
Q Consensus 440 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~~ 519 (662)
.+++.... ...+++.+++.++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||++....... ...
T Consensus 81 ~~~l~~~~---~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~--~~~ 152 (277)
T cd05577 81 KYHIYNVG---EPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK--KIK 152 (277)
T ss_pred HHHHHHcC---cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC--ccc
Confidence 99986542 2468999999999999999999999 899999999999999999999999999988654321 222
Q ss_pred ecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHH
Q 040242 520 HIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQ 599 (662)
Q Consensus 520 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 599 (662)
...++..|+|||.+.+..++.++|||||||++++|++|+.||.......... .+.. . ........+..
T Consensus 153 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~---~~~~----~-----~~~~~~~~~~~ 220 (277)
T cd05577 153 GRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKE---ELKR----R-----TLEMAVEYPDK 220 (277)
T ss_pred cccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHH---HHHh----c-----cccccccCCcc
Confidence 3467889999999988889999999999999999999999997543311100 0000 0 00011112223
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHH-HHHHHhcC
Q 040242 600 EAELVLTLGLLCCDPHPDFRPSTRR-VVQFLLRD 632 (662)
Q Consensus 600 ~~~~l~~l~~~Cl~~dP~~RPt~~e-Vl~~L~~~ 632 (662)
....+.+++.+||+.+|.+||+.++ .++.|..+
T Consensus 221 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 221 FSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred CCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 4566889999999999999995444 34434333
No 294
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-36 Score=317.29 Aligned_cols=261 Identities=29% Similarity=0.403 Sum_probs=214.2
Q ss_pred cccceeeeeCceEEEEEEeCCC-C--cEEEEEEeeccchh-hHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 358 REKNLVGSGGFGKVYRGVIPST-G--LEVAIKRVAHNSRQ-GMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 358 ~~~~~LG~G~~g~Vy~~~~~~~-g--~~vavK~~~~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
...++||+|.||.|++|.+..- | ..||||++...... ...+|++|+.+|-+|+|+|+++|+|.... ....+|+|.
T Consensus 113 ~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~EL 191 (1039)
T KOG0199|consen 113 KLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFEL 191 (1039)
T ss_pred HHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhh
Confidence 3467899999999999999642 2 45999999877544 67899999999999999999999999987 778999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
++.|+|.+.|++. .+..|-.......+.|||.||.||.. +++|||||..+|+||-....+||+||||.+.+..+
T Consensus 192 aplGSLldrLrka---~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 192 APLGSLLDRLRKA---KKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred cccchHHHHHhhc---cccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 9999999999773 26778888999999999999999999 89999999999999999999999999999988765
Q ss_pred CCCcce--ecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 514 INPQTT--HIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 514 ~~~~~~--~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
...... ...-...|+|||.+...+++.++|||+|||++|||++ |..||.+-... .+++.+|
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~----------------qIL~~iD 329 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI----------------QILKNID 329 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH----------------HHHHhcc
Confidence 443211 1234678999999999999999999999999999999 77888754322 1233344
Q ss_pred CCC-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHH-HHHhcCCCCCCCCCC
Q 040242 591 PTL-DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVV-QFLLRDASLPQAPLD 641 (662)
Q Consensus 591 ~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl-~~L~~~~~~p~~p~~ 641 (662)
..- -..+..+.+.++++++.||..+|++|||+..+. +.+..++...++-..
T Consensus 330 ~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~eaqp~~a~~~ 382 (1039)
T KOG0199|consen 330 AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQPAVARET 382 (1039)
T ss_pred ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcCCceeeee
Confidence 222 334567889999999999999999999999998 445555554444333
No 295
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.8e-34 Score=291.83 Aligned_cols=251 Identities=28% Similarity=0.451 Sum_probs=207.3
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccC
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVP 435 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 435 (662)
.|+..+.||+|++|.||++....++..+++|++........+.+.+|+..+++++|+|++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 36678899999999999999988899999999977665567789999999999999999999999999999999999999
Q ss_pred CCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC
Q 040242 436 NGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN 515 (662)
Q Consensus 436 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~ 515 (662)
+++|.+++... ...+++..+..++.|++++|.|||+ .+++|+||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 81 GGSLKDLLKST----NQTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred CCcHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccc
Confidence 99999998543 2468999999999999999999999 8999999999999999999999999999987654322
Q ss_pred CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCC
Q 040242 516 PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDY 595 (662)
Q Consensus 516 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 595 (662)
.....++..|++||.+.....+.++||||||+++++|++|+.|+.......... ... ... -+.+.
T Consensus 154 --~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~---~~~----~~~-----~~~~~- 218 (253)
T cd05122 154 --RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALF---KIA----TNG-----PPGLR- 218 (253)
T ss_pred --ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHH---HHH----hcC-----CCCcC-
Confidence 334568899999999988889999999999999999999999987543211111 000 000 01110
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 596 FDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 596 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
........+.+++.+|++.||++||++.+++++
T Consensus 219 ~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 219 NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111124668899999999999999999999864
No 296
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.5e-34 Score=295.54 Aligned_cols=255 Identities=22% Similarity=0.349 Sum_probs=190.8
Q ss_pred ceeeeeCceEEEEEEeCCC--CcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCC
Q 040242 361 NLVGSGGFGKVYRGVIPST--GLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG 437 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~--g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 437 (662)
+.||+|+||.||+|..... ...+++|.+.... ....+.|.+|+.+++.++||||++++++|......++||||+++|
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 80 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG 80 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence 3599999999999976432 2356677766543 345678999999999999999999999999999999999999999
Q ss_pred CcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC-CC
Q 040242 438 SLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI-NP 516 (662)
Q Consensus 438 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~-~~ 516 (662)
+|.+++.+.... ...+++.....++.|+++||.|||+ .+++||||||+|||++.++.+||+|||++....... ..
T Consensus 81 ~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~ 156 (268)
T cd05086 81 DLKSYLSQEQWH-RRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIE 156 (268)
T ss_pred cHHHHHHhhhcc-cccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcchhhh
Confidence 999999654221 2346777788999999999999999 899999999999999999999999999986432211 11
Q ss_pred cceecccCCcccCcccccC-------CCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccc
Q 040242 517 QTTHIVGTLGYLAPELTRT-------GKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRA 588 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~-------~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 588 (662)
......++..|+|||++.. ...+.++|||||||++|||++ |..||....... ....... +.....
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~------~~~~~~~-~~~~~~ 229 (268)
T cd05086 157 TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE------VLNHVIK-DQQVKL 229 (268)
T ss_pred cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH------HHHHHHh-hccccc
Confidence 1223467889999998743 245789999999999999997 566775433211 1111111 122233
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 589 IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 589 id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
.++.+.. .....+.+++..|| .+|++||++++|++.|.
T Consensus 230 ~~~~~~~---~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 230 FKPQLEL---PYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCCccCC---CCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 3444421 13345667888899 67999999999999874
No 297
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=3.1e-35 Score=315.41 Aligned_cols=261 Identities=22% Similarity=0.303 Sum_probs=207.9
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccc-c-----ccceeeeeeEeccCeeeE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLR-H-----RNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-H-----~niv~l~~~~~~~~~~~l 429 (662)
+|.+.+.||+|.||.|-+|.+..+++.||||+++... .-..+-..|+.+|..|+ | -|+|++++++...+++||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 7888999999999999999999999999999997653 34566688999999997 4 589999999999999999
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCC--CeEEeecccc
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADL--NPKLGDFGLA 507 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~--~~kL~DfGla 507 (662)
|+|.+ .-||.++|+.+. ...++......++.||+.||..||+ .+|||+||||+||||.+-. .+||+|||.+
T Consensus 266 VfELL-~~NLYellK~n~---f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDFGSS 338 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNK---FRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDFGSS 338 (586)
T ss_pred eehhh-hhhHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEecccc
Confidence 99999 679999998765 5669999999999999999999998 9999999999999997544 5999999999
Q ss_pred ccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHH-----Hhh-
Q 040242 508 RAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRE-----LHS- 581 (662)
Q Consensus 508 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~-----~~~- 581 (662)
+...... .....+..|.|||++.+.+++.+.||||||||+.||++|.+.|.+..+.++...+.-+.. +++
T Consensus 339 c~~~q~v----ytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~ 414 (586)
T KOG0667|consen 339 CFESQRV----YTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDT 414 (586)
T ss_pred cccCCcc----eeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 8754432 245678899999999999999999999999999999999888877665544432111100 000
Q ss_pred ---------c-C---------c-----------------cccccCC-CC---C-CCCHHHHHHHHHHHHHccCCCCCCCC
Q 040242 582 ---------Q-G---------Q-----------------ITRAIDP-TL---D-YFDPQEAELVLTLGLLCCDPHPDFRP 620 (662)
Q Consensus 582 ---------~-~---------~-----------------~~~~id~-~l---~-~~~~~~~~~l~~l~~~Cl~~dP~~RP 620 (662)
. . . ..+..-| .. . .........+++++++|++.||.+|+
T Consensus 415 ~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~ 494 (586)
T KOG0667|consen 415 AKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI 494 (586)
T ss_pred ccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence 0 0 0 0000011 00 0 11124456789999999999999999
Q ss_pred CHHHHHHH
Q 040242 621 STRRVVQF 628 (662)
Q Consensus 621 t~~eVl~~ 628 (662)
|..|.+++
T Consensus 495 tp~qal~H 502 (586)
T KOG0667|consen 495 TPAQALNH 502 (586)
T ss_pred CHHHHhcC
Confidence 99999985
No 298
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=1.4e-34 Score=297.73 Aligned_cols=258 Identities=24% Similarity=0.390 Sum_probs=201.1
Q ss_pred CcccceeeeeCceEEEEEEeCC---CCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccC------
Q 040242 357 FREKNLVGSGGFGKVYRGVIPS---TGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD------ 425 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~---~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~------ 425 (662)
|...+.||+|+||.||+|.+.. ++..||||++... .....+++.+|+.++++++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 4567889999999999998643 4688999998654 3345677899999999999999999999886532
Q ss_pred eeeEEEeccCCCCcchhccccccc-ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQQ-KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
..++++||+++|+|..++...... ....+++...+.++.|++.||+|||+ .+|+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcc
Confidence 247899999999999887543211 12358899999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCC-CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhc
Q 040242 505 GLARAYDHNIN-PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQ 582 (662)
Q Consensus 505 Gla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~ 582 (662)
|+++....... .......+++.|++||.+....++.++|||||||++|||++ |+.||...... .+..++..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~---~~~~~~~~---- 230 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS---EIYNYLIK---- 230 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH---HHHHHHHc----
Confidence 99986543221 11222345678999999988889999999999999999999 88888654321 12222211
Q ss_pred CccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 583 GQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 583 ~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
+. .+ .........+.+++.+|++.+|++||++.++++.|++.
T Consensus 231 ~~-------~~-~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 GN-------RL-KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CC-------cC-CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 10 00 01123446788999999999999999999999999753
No 299
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.4e-34 Score=303.22 Aligned_cols=256 Identities=27% Similarity=0.409 Sum_probs=204.2
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
|+..+.||+|+||.||+++...++..||+|++... .....+++..|+.++++++|+|++++++++......++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 66678899999999999999888999999998643 233456788999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
++ |+|.+++... ...++|.++..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||++......
T Consensus 107 ~~-g~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (317)
T cd06635 107 CL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA 178 (317)
T ss_pred CC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccCCc
Confidence 96 5777776433 3458999999999999999999999 89999999999999999999999999998754332
Q ss_pred CCCcceecccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 514 INPQTTHIVGTLGYLAPELTR---TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
....++..|+|||++. .+..+.++|||||||++|||++|+.||........ +..+.. .+ .
T Consensus 179 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~--~~~~~~----~~------~ 241 (317)
T cd06635 179 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYHIAQ----NE------S 241 (317)
T ss_pred -----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH--HHHHHh----cc------C
Confidence 2346788999999873 45688999999999999999999999875432111 111111 00 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCCCCCC
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDASLPQAP 639 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~~p~~p 639 (662)
+.. ........+.+++.+|++.+|.+||++.+|++++......+..+
T Consensus 242 ~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~ 288 (317)
T cd06635 242 PTL--QSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERPETV 288 (317)
T ss_pred CCC--CCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCcccc
Confidence 111 12234456889999999999999999999999776554444443
No 300
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=9.3e-35 Score=300.77 Aligned_cols=263 Identities=29% Similarity=0.442 Sum_probs=202.7
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch-hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR-QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~-~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
+|+..+.||.|++|.||+|+...+|..||||++..... .....+.+|+.++++++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 47888999999999999999988899999999876532 23456788999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++ +|.+++..... ...+++.++..++.|+++||.|||+ .+++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~-~l~~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 81 DK-DLKKYMDTHGV--RGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred Cc-cHHHHHHhcCC--CCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 74 88888754321 3468999999999999999999998 899999999999999999999999999998654332
Q ss_pred CCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH-HHHHH-------HHHhhcCcc
Q 040242 515 NPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV-LVDWV-------RELHSQGQI 585 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~-------~~~~~~~~~ 585 (662)
. ......++..|++||.+.+. .++.++|||||||++|||++|+.||.......... ..... ++.+..
T Consensus 155 ~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 230 (284)
T cd07836 155 N-TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQ--- 230 (284)
T ss_pred c-ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhc---
Confidence 2 12234568899999987654 56889999999999999999999997654322111 00000 000000
Q ss_pred ccccCCCC--------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 586 TRAIDPTL--------DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 586 ~~~id~~l--------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
........ ....+.....+.+++.+|++.||.+||++.+++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000111 11112234567899999999999999999999864
No 301
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-37 Score=290.10 Aligned_cols=253 Identities=25% Similarity=0.359 Sum_probs=204.1
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++.|+..+.||+|.|+.||++....+|+.+|+|.+... .....+++.+|+.+.+.|+||||++|.....+.+..++|+
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 35677788999999999999999999999999987443 3446778899999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC---CCeEEeeccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD---LNPKLGDFGLAR 508 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kL~DfGla~ 508 (662)
|+|.|+.|..-+.. +...++...-..+.||+++|.|+|. ++|+|||+||+|++|-.. --+||+|||++.
T Consensus 90 e~m~G~dl~~eIV~-----R~~ySEa~aSH~~rQiLeal~yCH~---n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi 161 (355)
T KOG0033|consen 90 DLVTGGELFEDIVA-----REFYSEADASHCIQQILEALAYCHS---NGIVHRDLKPENLLLASKAKGAAVKLADFGLAI 161 (355)
T ss_pred ecccchHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeeeeccCCCceeecccceEE
Confidence 99999999776632 3456777788899999999999999 899999999999999543 349999999999
Q ss_pred cccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccc
Q 040242 509 AYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRA 588 (662)
Q Consensus 509 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 588 (662)
... ........+|||+|||||++...+++..+|||+.||+||-|+.|+.||.+.... .+. +....+.. -
T Consensus 162 ~l~--~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~---rly----e~I~~g~y--d 230 (355)
T KOG0033|consen 162 EVN--DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH---RLY----EQIKAGAY--D 230 (355)
T ss_pred EeC--CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHH---HHH----HHHhcccc--C
Confidence 876 234455578999999999999999999999999999999999999999874332 111 11111110 1
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 589 IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 589 id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+++. +-....+....|+++||..||.+|.|+.|.+++
T Consensus 231 ~~~~---~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 231 YPSP---EWDTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred CCCc---ccCcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 1111 122344566788899999999999999988753
No 302
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=7.8e-35 Score=309.57 Aligned_cols=262 Identities=24% Similarity=0.369 Sum_probs=199.4
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEecc-----Cee
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ-----DEL 427 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~-----~~~ 427 (662)
+++|+..+.||+|++|.||+|....+|..||+|++... .......+..|+.++++++|+||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 47899999999999999999999889999999998643 233456788999999999999999999987544 357
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccc
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLA 507 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla 507 (662)
++|+||++ ++|.+++. ...+++..+..++.|+++||.|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 84 ~lv~e~~~-~~l~~~~~------~~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 84 YIVQELME-TDLYKLIK------TQHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred EEEehhcc-cCHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEECcccce
Confidence 99999996 57777763 3458999999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCC--cceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcC-
Q 040242 508 RAYDHNINP--QTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQG- 583 (662)
Q Consensus 508 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~- 583 (662)
+........ ......|+..|+|||.+.+ ..++.++||||+||++|||++|+.||......... .++...+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~---~~~~~~~~~~~ 230 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQL---NLILGVLGTPS 230 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHHHcCCCC
Confidence 865432211 1123468899999998654 46889999999999999999999999754322111 1111111100
Q ss_pred --ccccccC-------------CCCC--CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 584 --QITRAID-------------PTLD--YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 584 --~~~~~id-------------~~l~--~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
......+ +... ...+.....+.+++.+||+.+|.+||++.|++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 231 QEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000000 0000 0011234568899999999999999999999986
No 303
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.6e-34 Score=300.71 Aligned_cols=265 Identities=24% Similarity=0.306 Sum_probs=201.9
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch--hhHHHHHHHHHHhhccccccceeeeeeEecc--CeeeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR--QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ--DELLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~lV 430 (662)
++|+..+.||+|++|.||+|....+++.+++|.+..... .....+.+|+.++.+++||||+++++++... ...++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 468888999999999999999988899999999965432 2234577899999999999999999998877 789999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
|||++ ++|.+++... ...+++.+++.++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++...
T Consensus 85 ~e~~~-~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~ 156 (293)
T cd07843 85 MEYVE-HDLKSLMETM----KQPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFGLAREY 156 (293)
T ss_pred ehhcC-cCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecCceeec
Confidence 99996 5898888543 2368999999999999999999999 89999999999999999999999999999876
Q ss_pred cCCCCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH-HHHH-------HHHHhh
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV-LVDW-------VRELHS 581 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l~~~-------~~~~~~ 581 (662)
..... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||.......... +... .|..+.
T Consensus 157 ~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 157 GSPLK-PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred cCCcc-ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhh
Confidence 54321 22234578899999988654 46889999999999999999999997543321111 0000 010000
Q ss_pred c------CccccccCCCC-CCCCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 582 Q------GQITRAIDPTL-DYFDPQ-EAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 582 ~------~~~~~~id~~l-~~~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
. ..........+ ..++.. ..+.+.+++.+||+.+|++||++.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 00001111111 111111 35668899999999999999999999864
No 304
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=9.1e-35 Score=301.73 Aligned_cols=257 Identities=25% Similarity=0.381 Sum_probs=198.6
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccc-cccceeeeeeEeccCeeeEEEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+|...+.||+|+||.||++....++..||+|++.... ......+.+|+.++.++. |+||+++++++...+..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4555778999999999999999899999999986543 344567889999999996 99999999999998899999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
++ ++|.++...........+++.....++.++++||.|||+. .+++||||||+||+++.++.+||+|||+++.....
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 85 4655543211111135689999999999999999999973 58999999999999999999999999999765432
Q ss_pred CCCcceecccCCcccCcccccCC---CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTG---KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~---~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
. ......|+..|+|||.+.+. .++.++|||||||++|||++|+.||...... .+-+.+. .....
T Consensus 162 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~------~~~~~ 228 (288)
T cd06616 162 I--AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSV-----FDQLTQV------VKGDP 228 (288)
T ss_pred C--ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchH-----HHHHhhh------cCCCC
Confidence 2 11223578899999998765 6889999999999999999999998754311 1111111 11111
Q ss_pred CCC-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 591 PTL-DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 591 ~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+.+ ..........+.+++.+|++.+|++||++.+|+++
T Consensus 229 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 229 PILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 222 11223355678899999999999999999999974
No 305
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=3.3e-34 Score=291.12 Aligned_cols=252 Identities=28% Similarity=0.414 Sum_probs=208.5
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEecc--CeeeEEE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ--DELLLVY 431 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~lV~ 431 (662)
+|+..+.||+|++|.||+|....++..|++|++.... ....+.+.+|+..+++++|+||+++++++... ...++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677899999999999999998889999999987654 25567889999999999999999999999988 8899999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++++|.+++... ..+++.+++.++.|++++|.|||+ .+++|+||+|+||+++.++.++|+|||.+....
T Consensus 81 e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 152 (260)
T cd06606 81 EYVSGGSLSSLLKKF-----GKLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLG 152 (260)
T ss_pred EecCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEecc
Confidence 999999999998543 378999999999999999999999 899999999999999999999999999998766
Q ss_pred CCCCC-cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 512 HNINP-QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 512 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
..... ......++..|+|||.+.....+.++||||||+++++|++|+.||......... +..... .
T Consensus 153 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-----~~~~~~--------~ 219 (260)
T cd06606 153 DIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAA-----LYKIGS--------S 219 (260)
T ss_pred cccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH-----HHhccc--------c
Confidence 54321 123356889999999998888999999999999999999999999765421111 111000 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
......+......+.+++.+|++.+|++||++.+++++
T Consensus 220 ~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 220 GEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred CCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 11122233346778999999999999999999999864
No 306
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2e-34 Score=299.05 Aligned_cols=255 Identities=28% Similarity=0.410 Sum_probs=208.5
Q ss_pred HhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 352 SATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 352 ~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
..++.|+..+.||+|++|.||++.+..++..+++|++..... ..+.+.+|++.+++++|+|++++++++...+..++|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 456778888999999999999999987889999999976544 5677899999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+++++|.+++... ...+++.+++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++....
T Consensus 95 e~~~~~~L~~~l~~~----~~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 167 (286)
T cd06614 95 EYMDGGSLTDIITQN----FVRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLT 167 (286)
T ss_pred eccCCCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchhhhhc
Confidence 999999999999643 1379999999999999999999999 899999999999999999999999999887654
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
.... ......++..|++||.+.+..++.++|||||||++|+|++|+.|+......... ..+ ..... +
T Consensus 168 ~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~--~~~-----~~~~~-----~ 234 (286)
T cd06614 168 KEKS-KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRAL--FLI-----TTKGI-----P 234 (286)
T ss_pred cchh-hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHH--HHH-----HhcCC-----C
Confidence 3221 222345788999999998888999999999999999999999998754332111 100 00000 0
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.+ .........+..++.+|++.+|.+||++.+|+++
T Consensus 235 ~~-~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 235 PL-KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred CC-cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 11 1111234668899999999999999999999963
No 307
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-35 Score=309.08 Aligned_cols=251 Identities=27% Similarity=0.439 Sum_probs=211.0
Q ss_pred CCcccceeeeeCceEEEEEEeCC----CCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPS----TGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~----~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
.....++||.|-||.||+|+... ....||||..+.+ .....+.|+.|..++++++||||++++|.|.+. ..++|
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~Wiv 468 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIV 468 (974)
T ss_pred hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEE
Confidence 34446789999999999998742 2346899998774 455578899999999999999999999999764 68999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
||.++-|.|..+|..+ +..|+.......+.||..||.|||+ ...|||||..+|||+...-.+||+||||++.+
T Consensus 469 mEL~~~GELr~yLq~n----k~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 469 MELAPLGELREYLQQN----KDSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred EecccchhHHHHHHhc----cccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhc
Confidence 9999999999999765 5678899999999999999999999 89999999999999999999999999999998
Q ss_pred cCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCcccccc
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAI 589 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 589 (662)
+.+.....+...-+..|||||.++-.+++.++|||-|||++||++. |..||.+-...+ ....+
T Consensus 542 ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD----------------VI~~i 605 (974)
T KOG4257|consen 542 EDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD----------------VIGHI 605 (974)
T ss_pred cccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc----------------eEEEe
Confidence 8765555555566789999999999999999999999999999987 999998654321 11112
Q ss_pred CCC-CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 590 DPT-LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 590 d~~-l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
... -...++.++..|..|+.+||..+|.+||.+.|+...|.
T Consensus 606 EnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~ls 647 (974)
T KOG4257|consen 606 ENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILS 647 (974)
T ss_pred cCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHH
Confidence 111 12356678888999999999999999999999887664
No 308
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.3e-34 Score=301.54 Aligned_cols=266 Identities=23% Similarity=0.313 Sum_probs=199.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccc-cccceeeeeeEeccCe-----
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQDE----- 426 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~----- 426 (662)
++|+..+.||+|+||.||+|.+..+++.||+|.+.... ......+.+|+.++++++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888999999999999999998899999999886542 223457888999999995 6999999999877665
Q ss_pred eeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCC-CCCeEEeecc
Q 040242 427 LLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDA-DLNPKLGDFG 505 (662)
Q Consensus 427 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~DfG 505 (662)
.++||||+++ +|.+++..........+++..++.++.||++||.|||+ .+++||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEEEeecc
Confidence 8999999975 88888865432223468999999999999999999999 89999999999999998 8899999999
Q ss_pred ccccccCCCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCc
Q 040242 506 LARAYDHNINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQ 584 (662)
Q Consensus 506 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 584 (662)
+++.+..... ......+++.|+|||++.+ ..++.++||||||+++|||++|..||......... ..... ......
T Consensus 157 ~~~~~~~~~~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~--~~~~~-~~~~~~ 232 (295)
T cd07837 157 LGRAFSIPVK-SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQL--LHIFK-LLGTPT 232 (295)
T ss_pred cceecCCCcc-ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHH--HHHHH-HhCCCC
Confidence 9986543221 1222356889999998765 45789999999999999999999999754332211 11110 000000
Q ss_pred --cc-cc------c-CCC-----CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 585 --IT-RA------I-DPT-----LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 585 --~~-~~------i-d~~-----l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.. .. . -+. +....+.....+.+++.+||+.||.+||++.|++.+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 233 EQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred hhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 00 00 0 000 001112345668899999999999999999999864
No 309
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=7.1e-35 Score=297.42 Aligned_cols=248 Identities=23% Similarity=0.333 Sum_probs=204.5
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
+|+..++||.|+||.||++....++..||+|.+.... ....+.+.+|++++++++||||+++++++......++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999998889999999997542 2456789999999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|+++++|.+++... ..+++.+...++.|+++||.|||+ .+++|+||+|+||++++++.++|+|||++.....
T Consensus 81 ~~~~~~L~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 152 (258)
T cd05578 81 LLLGGDLRYHLSQK-----VKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVTP 152 (258)
T ss_pred CCCCCCHHHHHHhc-----CCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccCC
Confidence 99999999998432 468899999999999999999999 8999999999999999999999999999887644
Q ss_pred CCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
.. ......|+..|+|||.+.+...+.++|+||||+++|+|++|+.||........ ++....... .
T Consensus 153 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~----~~~~~~~~~---------~ 217 (258)
T cd05578 153 DT--LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIR----DQIRAKQET---------A 217 (258)
T ss_pred Cc--cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHH----HHHHHHhcc---------c
Confidence 32 22335688899999999888899999999999999999999999986543211 111111110 1
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCH--HHHH
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRPST--RRVV 626 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~--~eVl 626 (662)
....+......+.+++.+||+.||.+||++ +|++
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 218 DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 111222344778899999999999999999 6654
No 310
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.5e-34 Score=302.15 Aligned_cols=265 Identities=25% Similarity=0.317 Sum_probs=201.4
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccC-----
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD----- 425 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~----- 425 (662)
+.++|+..+.||+|++|.||+|....+++.||+|++.... ......+.+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 4578899999999999999999998889999999997543 223456788999999999999999999987654
Q ss_pred -----eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeE
Q 040242 426 -----ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPK 500 (662)
Q Consensus 426 -----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~k 500 (662)
..++|+||+++ +|...+... ...+++.+++.++.|++.||+|||+ .+|+|+||||+||++++++.+|
T Consensus 85 ~~~~~~~~lv~e~~~~-~l~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 85 KKDKGAFYLVFEYMDH-DLMGLLESG----LVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred cccCCcEEEEEcccCc-cHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCcEE
Confidence 78999999975 676766433 3468999999999999999999999 8999999999999999999999
Q ss_pred EeeccccccccCCCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHH
Q 040242 501 LGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVREL 579 (662)
Q Consensus 501 L~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~ 579 (662)
|+|||++...............++..|+|||.+.+ ...+.++|||||||+++||++|+.||.......... . +.+.
T Consensus 157 l~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~--~-~~~~ 233 (302)
T cd07864 157 LADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLE--L-ISRL 233 (302)
T ss_pred eCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHH--H-HHHH
Confidence 99999998765443222223356788999998754 357889999999999999999999997543322111 1 1111
Q ss_pred hhcC---c--------cccccCC------CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 580 HSQG---Q--------ITRAIDP------TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 580 ~~~~---~--------~~~~id~------~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.... . .....++ .........+..+.+++.+||+.+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred hCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1000 0 0000010 0000011235678899999999999999999999864
No 311
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-34 Score=292.90 Aligned_cols=266 Identities=26% Similarity=0.334 Sum_probs=218.1
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
.|+..+.||+|.-|+||++.+.+++..+|+|++.+.. +....+...|-++|+.+.||.+..|++.++.++..||+||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 3556788999999999999999988999999997764 3445567789999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
||+||+|..++++.. ...++.....-.+..++.||.|||. .|||.|||||+||||.++|.+-|+||.|+.....
T Consensus 158 yCpGGdL~~LrqkQp---~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQP---GKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred cCCCccHHHHHhhCC---CCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 999999999997665 5678999999999999999999999 9999999999999999999999999998754311
Q ss_pred ---------------------------------C-CC---------------------CcceecccCCcccCcccccCCC
Q 040242 513 ---------------------------------N-IN---------------------PQTTHIVGTLGYLAPELTRTGK 537 (662)
Q Consensus 513 ---------------------------------~-~~---------------------~~~~~~~gt~~y~aPE~~~~~~ 537 (662)
. .. ......+||-.|+|||++.+..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 00 0112357999999999999999
Q ss_pred CCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC--CCCCHHHHHHHHHHHHHccCCC
Q 040242 538 ATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL--DYFDPQEAELVLTLGLLCCDPH 615 (662)
Q Consensus 538 ~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l--~~~~~~~~~~l~~l~~~Cl~~d 615 (662)
.+.+.|.|+|||+||||+.|+.||.+....... ..++-..+ .+. +.....+.+||++.|..|
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl---------------~NIv~~~l~Fp~~-~~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETL---------------RNIVGQPLKFPEE-PEVSSAAKDLIRKLLVKD 375 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCchhhH---------------HHHhcCCCcCCCC-CcchhHHHHHHHHHhccC
Confidence 999999999999999999999999987654322 22222222 222 255677889999999999
Q ss_pred CCCCCC----HHHHHHH---------HhcCCCCCCCCCCCC
Q 040242 616 PDFRPS----TRRVVQF---------LLRDASLPQAPLDIH 643 (662)
Q Consensus 616 P~~RPt----~~eVl~~---------L~~~~~~p~~p~~~~ 643 (662)
|++|-- +.||-++ |.+...+|..|....
T Consensus 376 P~kRlg~~rGA~eIK~HpFF~gVnWaLir~~~PP~iP~~~d 416 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKRHPFFEGVNWALIRCARPPEIPKPVD 416 (459)
T ss_pred hhhhhccccchHHhhcCccccCCChhheeccCCCcCCCccc
Confidence 999998 8888763 455666677666544
No 312
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.9e-34 Score=300.80 Aligned_cols=266 Identities=25% Similarity=0.328 Sum_probs=198.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccC-------
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD------- 425 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~------- 425 (662)
++|+..+.||+|++|.||+|....++..||||++.... ......+.+|+.++++++||||++++++|...+
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 56888999999999999999998899999999986542 222345678999999999999999999987654
Q ss_pred -eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 426 -ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 426 -~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
..++||||+. ++|.+++... ...+++.+.+.++.|+++||+|||+ .+++|+||||+||+++.++.+||+||
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNK----NVKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcEEECcC
Confidence 3599999995 5787777432 3468999999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCCC---cceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHh
Q 040242 505 GLARAYDHNINP---QTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELH 580 (662)
Q Consensus 505 Gla~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~ 580 (662)
|++......... ......++..|+|||.+.+. .++.++||||||+++|||++|+.||..............+....
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999876443221 11234578899999987654 36889999999999999999999997654332222222211100
Q ss_pred hcC-----ccccccCC-CC-CCC---------CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 581 SQG-----QITRAIDP-TL-DYF---------DPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 581 ~~~-----~~~~~id~-~l-~~~---------~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
... ......+. .+ ... .......+.+++.+||+.||.+||++.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 000 00000000 00 000 00123456789999999999999999999864
No 313
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=3.4e-34 Score=300.86 Aligned_cols=278 Identities=27% Similarity=0.353 Sum_probs=204.8
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch--hhHHHHHHHHHHhhccccccceeeeeeEecc--CeeeE
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR--QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ--DELLL 429 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~--~~~~l 429 (662)
.++|+..+.||+|+||.||+|.+..+|+.||+|++..... .....+.+|+.++++++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 4678899999999999999999988999999999865422 2233567899999999999999999998654 46899
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
||||++ ++|.+++... ...+++.++..++.|+++||+|||+ .+++||||||+||+++.++.+||+|||++..
T Consensus 86 v~e~~~-~~l~~~l~~~----~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~ 157 (309)
T cd07845 86 VMEYCE-QDLASLLDNM----PTPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADFGLART 157 (309)
T ss_pred EEecCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccceeee
Confidence 999996 5888887543 3568999999999999999999999 8999999999999999999999999999987
Q ss_pred ccCCCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH-HHHH-------HHHHh
Q 040242 510 YDHNINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV-LVDW-------VRELH 580 (662)
Q Consensus 510 ~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l~~~-------~~~~~ 580 (662)
...... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||.......... +.++ .+...
T Consensus 158 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 158 YGLPAK-PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred cCCccC-CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhh
Confidence 654321 2222345788999998865 457899999999999999999999997554322111 1110 00000
Q ss_pred hcCcccccc--CCC-CCCC---CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH-hcCCCCCCCCC
Q 040242 581 SQGQITRAI--DPT-LDYF---DPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL-LRDASLPQAPL 640 (662)
Q Consensus 581 ~~~~~~~~i--d~~-l~~~---~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L-~~~~~~p~~p~ 640 (662)
......... ... .... .......+.+++.+|++.||++||++.+++++- -+..++|..|.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~~~~~ 303 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLPCEPE 303 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCCCCCC
Confidence 000000000 000 0000 011245677899999999999999999999753 23345554433
No 314
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=2.7e-34 Score=296.85 Aligned_cols=258 Identities=22% Similarity=0.260 Sum_probs=196.7
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccc-cccceeeeeeEecc--CeeeEEEe
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQ--DELLLVYD 432 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~--~~~~lV~E 432 (662)
|+..+.||+|+||.||+|....++..||+|++.... .........|+.++.++. |+|++++++++... +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 456788999999999999998889999999986542 222234467888898885 99999999999887 88999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|++ ++|.+++... ...++|.+++.++.|++.||.|||+ .+++||||+|+||+++. +.+||+|||+++....
T Consensus 81 ~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~ 151 (282)
T cd07831 81 LMD-MNLYELIKGR----KRPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIYS 151 (282)
T ss_pred cCC-ccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEeccccccccc
Confidence 996 5887777443 3468999999999999999999999 89999999999999999 9999999999987643
Q ss_pred CCCCcceecccCCcccCccccc-CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHh-----------
Q 040242 513 NINPQTTHIVGTLGYLAPELTR-TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELH----------- 580 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~----------- 580 (662)
... .....++..|+|||.+. ++.++.++|||||||++|||++|+.||......+ ...+.....
T Consensus 152 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07831 152 KPP--YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELD---QIAKIHDVLGTPDAEVLKKF 226 (282)
T ss_pred CCC--cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHH---HHHHHHHHcCCCCHHHHHhh
Confidence 321 12345788999999764 4567889999999999999999999997543321 111111111
Q ss_pred hcCccccccCCCC-----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 581 SQGQITRAIDPTL-----DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 581 ~~~~~~~~id~~l-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
..........+.. ..........+.+++.+||+.+|++||++.+++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 1111111111110 01112346789999999999999999999999874
No 315
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.8e-34 Score=292.03 Aligned_cols=251 Identities=25% Similarity=0.413 Sum_probs=207.8
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+|+..+.||+|++|.||+++...++..+++|++... ......++..|++++++++|+||+++++++......++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 477889999999999999999888999999998754 234456788999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++.+.. .....+++..++.++.|+++||.|||+ .+++|+||+|+||+++.++.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 81 APFGDLSKAISKRK-KKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred cCCCCHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 99999999986532 123568999999999999999999999 89999999999999999999999999999876554
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
......++..|++||.+.+..++.++|+||+|+++|||++|+.||....... +...+ .. ...
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~---~~~~~----~~--------~~~ 218 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQD---LRYKV----QR--------GKY 218 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHH----hc--------CCC
Confidence 1222457889999999988889999999999999999999999997554221 11111 11 111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
..........+..++.+|++.+|++||++.+++++
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 22233456678999999999999999999999875
No 316
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=4.1e-34 Score=290.54 Aligned_cols=253 Identities=23% Similarity=0.412 Sum_probs=208.7
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch--hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR--QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+|+..+.||+|++|.||++....++..+++|++..... ...+++..|++.+++++|+|++++++.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 47778999999999999999988899999999976532 5567789999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++..... ....+++.++..++.++++||.|||+ .+++|+||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 81 ADGGDLSQKIKKQKK-EGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred cCCCcHHHHHHHhhc-cCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 999999999865421 13678999999999999999999999 89999999999999999999999999999876554
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
. .......|++.|+|||......++.++||||+|+++++|++|+.|+....... ...... .. ..
T Consensus 157 ~-~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~------~~~~~~-~~--------~~ 220 (258)
T cd08215 157 V-DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE------LALKIL-KG--------QY 220 (258)
T ss_pred c-ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH------HHHHHh-cC--------CC
Confidence 2 12233468889999999988889999999999999999999999987553211 111111 11 11
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
...+......+.+++.+||..+|++||++.+++++
T Consensus 221 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 221 PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 11222345678889999999999999999999864
No 317
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=2.4e-34 Score=297.21 Aligned_cols=260 Identities=27% Similarity=0.362 Sum_probs=203.3
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch--hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR--QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
|+..+.||+|++|.||++....+++.+++|++..... .....+..|+.++++++|+||+++++++..+...++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 4567889999999999999988899999999865532 34567889999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
++ +|.+++... ...+++.+++.++.|+++||.|||+ .+++|+||||+||+++.++.+||+|||.+.......
T Consensus 81 ~~-~l~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~ 152 (283)
T cd05118 81 DT-DLYKLIKDR----QRGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV 152 (283)
T ss_pred CC-CHHHHHHhh----cccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc
Confidence 65 888887543 2468999999999999999999999 899999999999999999999999999998765543
Q ss_pred CCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcC------cccc
Q 040242 515 NPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQG------QITR 587 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~------~~~~ 587 (662)
.......++..|+|||.+.+. .++.++||||+|+++|+|++|+.||......+.... +.+..... ...+
T Consensus 153 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 228 (283)
T cd05118 153 -RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFK---IFRTLGTPDPEVWPKFTS 228 (283)
T ss_pred -ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH---HHHHcCCCchHhcccchh
Confidence 122234578899999988766 789999999999999999999999976543222111 00000000 0000
Q ss_pred -----------ccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 588 -----------AIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 588 -----------~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
..+.............+.+++.+||+.||.+||++++++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 229 LARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 00000011122346778999999999999999999999864
No 318
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.6e-34 Score=299.41 Aligned_cols=266 Identities=25% Similarity=0.348 Sum_probs=198.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
++|+..+.||+|++|.||+|....+++.||+|++.... ....+.+.+|++++++++|+||+++++++......++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46888999999999999999998889999999986542 2334678899999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCC-CCCeEEeecccccccc
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDA-DLNPKLGDFGLARAYD 511 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~DfGla~~~~ 511 (662)
|++ ++|.+++.... ...+++.....++.||+.||+|||+ .+++|+||+|+||+++. ++.+||+|||++....
T Consensus 82 ~~~-~~l~~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~ 154 (294)
T PLN00009 82 YLD-LDLKKHMDSSP---DFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFG 154 (294)
T ss_pred ccc-ccHHHHHHhCC---CCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEcccccccccC
Confidence 995 57877774332 2345778888999999999999999 89999999999999985 5579999999998654
Q ss_pred CCCCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH-HHHHHHHHhhcC-----c
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV-LVDWVRELHSQG-----Q 584 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l~~~~~~~~~~~-----~ 584 (662)
.... ......+++.|+|||++.+. .++.++||||+||++|+|++|+.||.......... ...+........ .
T Consensus 155 ~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (294)
T PLN00009 155 IPVR-TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTS 233 (294)
T ss_pred CCcc-ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccc
Confidence 3221 12234568899999988653 57899999999999999999999997543322111 000000000000 0
Q ss_pred c---ccc----cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 585 I---TRA----IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 585 ~---~~~----id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+ ... ....+....+.....+.+++.+|++.+|++||++.+++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 234 LPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred chhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 000 0000011122334567889999999999999999999973
No 319
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.4e-34 Score=306.66 Aligned_cols=273 Identities=24% Similarity=0.322 Sum_probs=202.3
Q ss_pred hHHHHHhc----cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeee
Q 040242 347 YSELYSAT----KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGW 420 (662)
Q Consensus 347 ~~el~~at----~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~ 420 (662)
.+|+..++ ++|...+.||+|++|.||+|+...+|+.||||++... .......+.+|+.++++++|+||++++++
T Consensus 3 ~~~~~~~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~ 82 (342)
T cd07879 3 REEVNKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDV 82 (342)
T ss_pred hhhhhhhhhccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhhe
Confidence 34455443 7899999999999999999999888999999998653 22334568899999999999999999999
Q ss_pred EeccC------eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeC
Q 040242 421 CRKQD------ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLID 494 (662)
Q Consensus 421 ~~~~~------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 494 (662)
+.... ..++|+||+. .+|..++ ...+++..+..++.|++.||.|||+ .+++||||||+||+++
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~-------~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dlkp~NIll~ 151 (342)
T cd07879 83 FTSAVSGDEFQDFYLVMPYMQ-TDLQKIM-------GHPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDLKPGNLAVN 151 (342)
T ss_pred ecccccCCCCceEEEEecccc-cCHHHHH-------cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEC
Confidence 86543 4699999995 4666654 3358899999999999999999999 8999999999999999
Q ss_pred CCCCeEEeeccccccccCCCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHH
Q 040242 495 ADLNPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLV 573 (662)
Q Consensus 495 ~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~ 573 (662)
.++.+||+|||+++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||............
T Consensus 152 ~~~~~kL~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~ 227 (342)
T cd07879 152 EDCELKILDFGLARHADAE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 227 (342)
T ss_pred CCCCEEEeeCCCCcCCCCC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 9999999999998865332 223457889999998866 46889999999999999999999999865422111100
Q ss_pred HHH--------HHHhhcCccccccC--CC-----CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhcCCC
Q 040242 574 DWV--------RELHSQGQITRAID--PT-----LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF--LLRDAS 634 (662)
Q Consensus 574 ~~~--------~~~~~~~~~~~~id--~~-----l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~--L~~~~~ 634 (662)
... ............+. +. +....+.....+.+++.+||+.||.+||++.+++++ +++..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 228 LKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 000 00000000000000 00 000011234567899999999999999999999965 665544
No 320
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-35 Score=308.77 Aligned_cols=246 Identities=28% Similarity=0.414 Sum_probs=207.5
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
.|...+-||.|+||.||.+.+..+.+.||||++... +.+.+.+++.|+..|.+++|||.+.+.||+......|||||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 356677899999999999999999999999999654 34556789999999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|| -|+-.++|.-. +++|...++..|+.+.+.||+|||+ .+.||||||+.||||++.|.|||+|||.+.....
T Consensus 107 YC-lGSAsDlleVh----kKplqEvEIAAi~~gaL~gLaYLHS---~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P 178 (948)
T KOG0577|consen 107 YC-LGSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHS---HNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP 178 (948)
T ss_pred HH-hccHHHHHHHH----hccchHHHHHHHHHHHHHHHHHHHH---hhHHhhhccccceEecCCCeeeeccccchhhcCc
Confidence 99 77888888544 5788999999999999999999999 8999999999999999999999999999987544
Q ss_pred CCCCcceecccCCcccCcccc---cCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcccccc
Q 040242 513 NINPQTTHIVGTLGYLAPELT---RTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAI 589 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~---~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~i 589 (662)
. ...+|||.|||||++ ..+.|+-|.||||+|++..||.-.++|+.......- |.. +.+.-
T Consensus 179 A-----nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA--LYH----------IAQNe 241 (948)
T KOG0577|consen 179 A-----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYH----------IAQNE 241 (948)
T ss_pred h-----hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH--HHH----------HHhcC
Confidence 3 346899999999976 357899999999999999999999999875432111 110 12222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 590 DPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 590 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.|.|. ..+....+..++..||+.-|.+|||..+++++
T Consensus 242 sPtLq--s~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 242 SPTLQ--SNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred CCCCC--CchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 34443 44667788899999999999999999999874
No 321
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.6e-34 Score=297.57 Aligned_cols=246 Identities=24% Similarity=0.377 Sum_probs=201.3
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCc
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL 439 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 439 (662)
..+||+|++|.||++....++..||||++..........+.+|+.++++++|+|++++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 46799999999999999889999999998766555667799999999999999999999999999999999999999999
Q ss_pred chhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcce
Q 040242 440 DKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQTT 519 (662)
Q Consensus 440 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~~ 519 (662)
.+++.. ..+++.....++.|++.+|+|||+ .+++|+||+|+||++++++.++|+|||++....... ....
T Consensus 105 ~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~ 174 (292)
T cd06657 105 TDIVTH------TRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRK 174 (292)
T ss_pred HHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceeccccc-cccc
Confidence 998742 347899999999999999999999 899999999999999999999999999987654322 1223
Q ss_pred ecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHH
Q 040242 520 HIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQ 599 (662)
Q Consensus 520 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 599 (662)
...++..|+|||.+.+..++.++||||+|+++|||++|+.||......... ..+.. .+.+.+.. ...
T Consensus 175 ~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~---~~~~~---------~~~~~~~~-~~~ 241 (292)
T cd06657 175 SLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM---KMIRD---------NLPPKLKN-LHK 241 (292)
T ss_pred ccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH---HHHHh---------hCCcccCC-ccc
Confidence 346889999999998888899999999999999999999998754322111 11111 11111111 112
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 600 EAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 600 ~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
....+..++.+||+.+|.+||++.+++++
T Consensus 242 ~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 242 VSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred CCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 34457788999999999999999999984
No 322
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=6.1e-34 Score=304.81 Aligned_cols=263 Identities=24% Similarity=0.294 Sum_probs=201.5
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccC-----
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD----- 425 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~----- 425 (662)
..++|+..+.||+|+||.||++....++..||+|++... ......++.+|+.++++++|+||+++++++....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 447899999999999999999999889999999998643 2334567788999999999999999999886442
Q ss_pred -eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 426 -ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 426 -~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
..++||||+. ++|.+.+. ..+++..+..++.|+++||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~-------~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~kL~Df 162 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQ-------MDLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDF 162 (353)
T ss_pred CcEEEEEeccC-CCHHHHHh-------hcCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEccC
Confidence 5799999995 58888773 238888999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH-H--------HHH
Q 040242 505 GLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV-L--------VDW 575 (662)
Q Consensus 505 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l--------~~~ 575 (662)
|+++...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...+...... + .++
T Consensus 163 g~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
T cd07850 163 GLARTAGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEF 240 (353)
T ss_pred ccceeCCCCC--CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 9998764432 1223457899999999988889999999999999999999999997543221110 0 000
Q ss_pred -------HHHHhhcCc------cccccCCCC-----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 576 -------VRELHSQGQ------ITRAIDPTL-----DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 576 -------~~~~~~~~~------~~~~id~~l-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+........ ..+.....+ ..........+.+++.+||+.||++||++.|++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 241 MSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000000000 001111111 01122345668899999999999999999999975
No 323
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=7e-34 Score=288.57 Aligned_cols=248 Identities=28% Similarity=0.484 Sum_probs=205.2
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch--hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR--QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+|+..+.||+|++|.||++.....+..|++|.+..... ...+.+.+|++++++++|+|++++++++...+..+++|||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 46778999999999999999988889999999976643 4567899999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+++++|.+++... ..+++..+..++.|++.+|.|||+ .+++||||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~~~L~~~~~~~-----~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (254)
T cd06627 81 AENGSLRQIIKKF-----GPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDV 152 (254)
T ss_pred CCCCcHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence 9999999998532 468999999999999999999998 89999999999999999999999999999876543
Q ss_pred CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL 593 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l 593 (662)
... .....++..|+|||...+..++.++|||++|+++++|++|+.|+........ .| .. ... ..+.
T Consensus 153 ~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~----~~--~~-~~~-----~~~~- 218 (254)
T cd06627 153 SKD-DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAA----LF--RI-VQD-----DHPP- 218 (254)
T ss_pred ccc-ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHH----HH--HH-hcc-----CCCC-
Confidence 321 2334678999999999887889999999999999999999999875432110 01 10 000 0111
Q ss_pred CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 594 DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 594 ~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
.+......+..++.+||+.+|++||++.+++.
T Consensus 219 --~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 219 --LPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred --CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 12233566789999999999999999999985
No 324
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.2e-33 Score=289.63 Aligned_cols=251 Identities=24% Similarity=0.374 Sum_probs=201.0
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc-----chhhHHHHHHHHHHhhccccccceeeeeeEecc--Cee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-----SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ--DEL 427 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-----~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~--~~~ 427 (662)
.+|+..+.||+|++|.||+|.+..++..|++|.+... ..+..+.+.+|++++++++|+||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 4688899999999999999999888999999987532 234456889999999999999999999998654 468
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccc
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLA 507 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla 507 (662)
++++||+++++|.+++.. ...+++.....++.|++.||.|||+ .+++|+||||+||+++.++.++|+|||++
T Consensus 82 ~~v~e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 153 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA-----YGALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGAS 153 (264)
T ss_pred EEEEEeCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECccccc
Confidence 899999999999999853 2347888999999999999999998 89999999999999999999999999999
Q ss_pred ccccCCCC--CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcc
Q 040242 508 RAYDHNIN--PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQI 585 (662)
Q Consensus 508 ~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 585 (662)
+....... .......++..|+|||.+.+..++.++|||||||+++||++|+.||........ .. +...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~--~~----~~~~---- 223 (264)
T cd06653 154 KRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAA--IF----KIAT---- 223 (264)
T ss_pred cccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHH--HH----HHHc----
Confidence 86543211 112234688999999999888899999999999999999999999975432211 11 1000
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 586 TRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 586 ~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.... ...+....+.+.+++.+|+. +|.+||+..+++.+
T Consensus 224 -~~~~---~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 224 -QPTK---PMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred -CCCC---CCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 0011 22334455678889999999 57999999988764
No 325
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-35 Score=316.19 Aligned_cols=257 Identities=29% Similarity=0.425 Sum_probs=212.0
Q ss_pred cccceeeeeCceEEEEEEeCCCC----cEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 358 REKNLVGSGGFGKVYRGVIPSTG----LEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 358 ~~~~~LG~G~~g~Vy~~~~~~~g----~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
...++||+|+||+||||.+...| .+||+|++... ..+...++++|+.+|.+++||||++|+|+|.... +.||++
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq 777 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ 777 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence 34689999999999999985444 46899988665 4556789999999999999999999999997765 889999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
||+.|+|.++++.+ +..+.-+..+.|..|||+||.|||+ +.++||||-++||||.+-..+||.|||+++....
T Consensus 778 ~mP~G~LlDyvr~h----r~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~ 850 (1177)
T KOG1025|consen 778 LMPLGCLLDYVREH----RDNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAP 850 (1177)
T ss_pred hcccchHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhccCc
Confidence 99999999999776 5668888999999999999999998 8999999999999999999999999999998876
Q ss_pred CCCCcc-eecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 513 NINPQT-THIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 513 ~~~~~~-~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
+..... ....-.+.|||-|.+....++.++|||||||.+||++| |..|+++....+. ...++.|.
T Consensus 851 d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI-------~dlle~ge------ 917 (1177)
T KOG1025|consen 851 DEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI-------PDLLEKGE------ 917 (1177)
T ss_pred ccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh-------hHHHhccc------
Confidence 543322 22334678999999999999999999999999999999 9999987654322 22222222
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCCCC
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDASLPQ 637 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~~p~ 637 (662)
+| ..++-....+..++.+||..|+..||+++++...+.+-+.-|+
T Consensus 918 -RL-sqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpq 962 (1177)
T KOG1025|consen 918 -RL-SQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQ 962 (1177)
T ss_pred -cC-CCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence 12 3355667778999999999999999999999988765544433
No 326
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.1e-33 Score=300.87 Aligned_cols=264 Identities=25% Similarity=0.385 Sum_probs=200.4
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhcc-ccccceeeeeeEecc--Ceee
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQ--DELL 428 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~--~~~~ 428 (662)
.++|+..+.||+|+||.||+|.+..++..+|+|++... .......+..|+.+++++ +|+||++++++|... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 46788889999999999999999888999999988542 233445677899999999 999999999998654 3689
Q ss_pred EEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccc
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLAR 508 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~ 508 (662)
+||||++ ++|..++.. ..++|..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++.
T Consensus 86 lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 86 LVFEYME-TDLHAVIRA------NILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEecccc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 9999996 588888742 267899999999999999999999 899999999999999999999999999998
Q ss_pred cccCCCC----CcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHH-------
Q 040242 509 AYDHNIN----PQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWV------- 576 (662)
Q Consensus 509 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~------- 576 (662)
....... .......|+..|+|||.+.+ ...+.++||||||+++|||++|+.||...............
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 6644322 22233568899999998754 45788999999999999999999999754432221110000
Q ss_pred -----HHHhhcCccccccC----CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 577 -----RELHSQGQITRAID----PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 577 -----~~~~~~~~~~~~id----~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
..... ..+.+.+. ..+..........+.+++.+||+.+|++||++.+++++
T Consensus 236 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 236 DIESIKSPFA-ATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHhhhH-HHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00000 00011110 00111111245678899999999999999999999975
No 327
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=6.6e-34 Score=290.98 Aligned_cols=243 Identities=23% Similarity=0.326 Sum_probs=198.0
Q ss_pred eeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCc
Q 040242 363 VGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL 439 (662)
Q Consensus 363 LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 439 (662)
||.|++|.||+++...++..+++|++.... ....+.+.+|+.++++++||||+++++.+..+...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999998889999999986542 23456789999999999999999999999999999999999999999
Q ss_pred chhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcce
Q 040242 440 DKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQTT 519 (662)
Q Consensus 440 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~~ 519 (662)
.+++.+. ..+++.++..++.|+++||.|||+ .+++|+||+|+||+++.++.++|+|||++....... ...
T Consensus 81 ~~~l~~~-----~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~ 150 (262)
T cd05572 81 WTILRDR-----GLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTW 150 (262)
T ss_pred HHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccc
Confidence 9999543 348899999999999999999999 899999999999999999999999999998765432 223
Q ss_pred ecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHH
Q 040242 520 HIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQ 599 (662)
Q Consensus 520 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 599 (662)
...++..|++||.+....++.++|+||||+++|||++|..||........ +....... + .....++..
T Consensus 151 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~-~-------~~~~~~~~~ 218 (262)
T cd05572 151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPM----EIYNDILK-G-------NGKLEFPNY 218 (262)
T ss_pred cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHH----HHHHHHhc-c-------CCCCCCCcc
Confidence 34678999999999888899999999999999999999999976542111 11111110 0 011112222
Q ss_pred HHHHHHHHHHHccCCCCCCCCC-----HHHHHH
Q 040242 600 EAELVLTLGLLCCDPHPDFRPS-----TRRVVQ 627 (662)
Q Consensus 600 ~~~~l~~l~~~Cl~~dP~~RPt-----~~eVl~ 627 (662)
....+..++.+||+.+|++||+ +.|+++
T Consensus 219 ~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 219 IDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 3567899999999999999999 666665
No 328
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=7.2e-34 Score=294.08 Aligned_cols=243 Identities=22% Similarity=0.322 Sum_probs=190.2
Q ss_pred eeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHh---hccccccceeeeeeEeccCeeeEEEeccC
Q 040242 362 LVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSM---GRLRHRNLVQLHGWCRKQDELLLVYDYVP 435 (662)
Q Consensus 362 ~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l---~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 435 (662)
+||+|+||.||++....+++.+|+|.+.... ......+.+|..++ ...+|+|++++++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999998889999999886542 12223344454433 33479999999999999999999999999
Q ss_pred CCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC
Q 040242 436 NGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN 515 (662)
Q Consensus 436 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~ 515 (662)
+++|.+++.. ...+++.....++.|++.||.|||+ .+++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~-----~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~- 151 (279)
T cd05633 81 GGDLHYHLSQ-----HGVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK- 151 (279)
T ss_pred CCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC-
Confidence 9999998853 3458999999999999999999999 899999999999999999999999999987654322
Q ss_pred CcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 516 PQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 516 ~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
.....|+..|+|||.+.. ..++.++||||+||+++||++|+.||..........+ .... ......
T Consensus 152 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~----~~~~------~~~~~~-- 217 (279)
T cd05633 152 --PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI----DRMT------LTVNVE-- 217 (279)
T ss_pred --ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHH----HHHh------hcCCcC--
Confidence 123468999999998864 4578999999999999999999999975433221111 1110 011111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRP-----STRRVVQF 628 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~eVl~~ 628 (662)
.+......+.+++.+||+.||++|| ++.|++++
T Consensus 218 -~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 218 -LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred -CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 2233456788899999999999999 59999885
No 329
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.5e-33 Score=291.88 Aligned_cols=261 Identities=28% Similarity=0.357 Sum_probs=197.6
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhcc---ccccceeeeeeEeccCe-----
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRL---RHRNLVQLHGWCRKQDE----- 426 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l---~H~niv~l~~~~~~~~~----- 426 (662)
|+..+.||+|++|.||+|+...++..||+|++.... ......+.+|+.++.++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567789999999999999998889999999996432 22234566777766655 69999999999988776
Q ss_pred eeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccc
Q 040242 427 LLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGL 506 (662)
Q Consensus 427 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGl 506 (662)
.+++|||++ ++|.+++.... ...+++.+++.++.|+++||.|||+ .+++|+||+|+||+++.++.+||+|||+
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~---~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg~ 153 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCP---KPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFGL 153 (287)
T ss_pred eEEEehhcc-cCHHHHHHHcc---CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccCc
Confidence 999999996 58888885432 2358999999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcc-
Q 040242 507 ARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQI- 585 (662)
Q Consensus 507 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~- 585 (662)
+..+..... .....++..|+|||.+.+..++.++|||||||++|||++|+.||........ +..+..........
T Consensus 154 ~~~~~~~~~--~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 229 (287)
T cd07838 154 ARIYSFEMA--LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQ--LDKIFDVIGLPSEEE 229 (287)
T ss_pred ceeccCCcc--cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHH--HHHHHHHcCCCChHh
Confidence 987654322 1233578899999999888899999999999999999999999875433211 11111110000000
Q ss_pred --------ccccCCC----CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 586 --------TRAIDPT----LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 586 --------~~~id~~----l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
....... ...........+.+++.+||+.||++||++.+++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 230 WPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred cCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 0000000 011112344667899999999999999999999864
No 330
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=4.9e-34 Score=303.60 Aligned_cols=265 Identities=24% Similarity=0.340 Sum_probs=201.3
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEecc-----Ce
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ-----DE 426 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~-----~~ 426 (662)
.++|...+.||+|+||+||++....++..||||++... .......+..|+.++++++|+||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 46788999999999999999999889999999998653 233455678899999999999999999988654 24
Q ss_pred eeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccc
Q 040242 427 LLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGL 506 (662)
Q Consensus 427 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGl 506 (662)
.++||||+. ++|.+++.. ...+++.....++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 84 ~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~ 154 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRS-----SQTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGL 154 (337)
T ss_pred EEEEEeCCC-CCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCcc
Confidence 799999995 788888753 2458899999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHH--------
Q 040242 507 ARAYDHNINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVR-------- 577 (662)
Q Consensus 507 a~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~-------- 577 (662)
++...... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||.............-+.
T Consensus 155 ~~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 233 (337)
T cd07858 155 ARTTSEKG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDL 233 (337)
T ss_pred ccccCCCc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHh
Confidence 98764432 12223457889999998764 468899999999999999999999997543222111110000
Q ss_pred HHhhcCccc-------cccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 578 ELHSQGQIT-------RAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 578 ~~~~~~~~~-------~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
......... ...++......+.....+.+++++||+.+|++||++++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 234 GFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 000000000 000111111112345668899999999999999999999987
No 331
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=4.5e-34 Score=291.64 Aligned_cols=246 Identities=25% Similarity=0.389 Sum_probs=197.9
Q ss_pred eeeeCceEEEEEEeCCCCcEEEEEEeeccch---hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCc
Q 040242 363 VGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR---QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL 439 (662)
Q Consensus 363 LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 439 (662)
||+|++|.||+++...+++.+++|.+..... ...+.+.+|+.++++++|+||+++++.+..+...+++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 6899999999999988899999999866533 4566789999999999999999999999999999999999999999
Q ss_pred chhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC----
Q 040242 440 DKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN---- 515 (662)
Q Consensus 440 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~---- 515 (662)
.+++... ..+++..+..++.|+++||.|||+ .+++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 152 (265)
T cd05579 81 ASLLENV-----GSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLN 152 (265)
T ss_pred HHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccc
Confidence 9998542 368999999999999999999999 8999999999999999999999999999886543311
Q ss_pred ---CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCC
Q 040242 516 ---PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 516 ---~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
.......++..|++||.......+.++||||||++++||++|+.||........ ...... +. ....
T Consensus 153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~------~~~~~~-~~----~~~~ 221 (265)
T cd05579 153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEI------FQNILN-GK----IEWP 221 (265)
T ss_pred cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH------HHHHhc-CC----cCCC
Confidence 122334678899999999888899999999999999999999999975542211 111110 11 0000
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
.. ......+..++.+|++.+|++||++.+|.+.|+
T Consensus 222 -~~--~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 222 -ED--VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred -cc--ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 00 012567789999999999999999966555543
No 332
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1e-33 Score=295.36 Aligned_cols=253 Identities=26% Similarity=0.415 Sum_probs=196.6
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccc-cccceeeeeeEeccCeeeEEEe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lV~E 432 (662)
++|+..+.||+|++|.||+|....++..||||++.... .....++..|+.++.+.. |+||++++++|......+++||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 55778899999999999999998889999999997543 334456777887777765 9999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|++ ++|.+++... ...+++..+..++.|+++||+|||+. .+++||||+|+||++++++.+||+|||++..+..
T Consensus 95 ~~~-~~l~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 95 LMS-TCLDKLLKRI----QGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred ccC-cCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 984 5777766432 34689999999999999999999972 5899999999999999999999999999886543
Q ss_pred CCCCcceecccCCcccCcccccCCC----CCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccc
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTGK----ATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRA 588 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~~----~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 588 (662)
... .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||.......+ . ........
T Consensus 168 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~----~~~~~~~~----- 235 (296)
T cd06618 168 SKA--KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFE-V----LTKILQEE----- 235 (296)
T ss_pred CCc--ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHH-H----HHHHhcCC-----
Confidence 221 12235788999999986543 78899999999999999999999965322111 1 11111110
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 589 IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 589 id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.+... ........+.+++.+||+.||.+||++.+++++
T Consensus 236 -~~~~~-~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 236 -PPSLP-PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred -CCCCC-CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 01111 011234568899999999999999999999875
No 333
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-36 Score=290.48 Aligned_cols=248 Identities=24% Similarity=0.405 Sum_probs=209.9
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCC
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
|.+..+||+|+||.|||+.++..|..+|||.+..++ ..+++..|+.++++.+.|++|+++|.+.....+++|||||-.
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 666889999999999999999999999999986653 457889999999999999999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|++.+++.-. +++|++.++-.+++..++||+|||. ..-+|||||+.||||+.+|.+||+|||.+..+.... .
T Consensus 113 GSiSDI~R~R----~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM-A 184 (502)
T KOG0574|consen 113 GSISDIMRAR----RKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM-A 184 (502)
T ss_pred CcHHHHHHHh----cCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchhhhhhccccchhhhhH-H
Confidence 9999999543 6889999999999999999999999 678999999999999999999999999998654322 2
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC-CC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL-DY 595 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l-~~ 595 (662)
....+.||+.|||||++..-.|..++||||+|+...||.-|++||.+-.+---. ..-.-.|.- -.
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAI--------------FMIPT~PPPTF~ 250 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAI--------------FMIPTKPPPTFK 250 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccccee--------------EeccCCCCCCCC
Confidence 334578999999999998888999999999999999999999999754321000 000011111 12
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 596 FDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 596 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.++.....+.++++.||-.+|++|-|+-+++++
T Consensus 251 KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 251 KPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred ChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 345667889999999999999999999999885
No 334
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.9e-34 Score=318.62 Aligned_cols=270 Identities=20% Similarity=0.287 Sum_probs=190.0
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCC-cEEEEE------------------EeeccchhhHHHHHHHHHHhhccccccc
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTG-LEVAIK------------------RVAHNSRQGMKEFVAEITSMGRLRHRNL 414 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g-~~vavK------------------~~~~~~~~~~~~f~~Ei~~l~~l~H~ni 414 (662)
.++|+..+.||+|+||+||++..+... ...+.| .+. ........+.+|+.++++++|+||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCCc
Confidence 367999999999999999998764322 111211 111 122334568899999999999999
Q ss_pred eeeeeeEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeC
Q 040242 415 VQLHGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLID 494 (662)
Q Consensus 415 v~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 494 (662)
+++++++...+..++|+|++ .++|.+++..............+...++.||+.||.|||+ .+|+||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEC
Confidence 99999999999999999999 5677777654322112223455677899999999999999 8999999999999999
Q ss_pred CCCCeEEeeccccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCC-CCcccchhhHHHH
Q 040242 495 ADLNPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRP-IEPQRTAMELVLV 573 (662)
Q Consensus 495 ~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p-~~~~~~~~~~~l~ 573 (662)
.++.+||+|||+++.+............||..|+|||++.+..++.++|||||||++|||++|+.+ +..........+.
T Consensus 302 ~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~ 381 (501)
T PHA03210 302 CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLL 381 (501)
T ss_pred CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHH
Confidence 999999999999987765433333446799999999999988999999999999999999998754 4322211111111
Q ss_pred HHHHHHhh-cC-------ccccccCCC-C----CCC-----CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 574 DWVRELHS-QG-------QITRAIDPT-L----DYF-----DPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 574 ~~~~~~~~-~~-------~~~~~id~~-l----~~~-----~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+.+...-. .. ++.+.++.. + ... .......+.+++.+||+.||.+||++.|++++
T Consensus 382 ~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 382 KIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 11110000 00 000000000 0 000 00112346677889999999999999999974
No 335
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.1e-33 Score=292.47 Aligned_cols=263 Identities=27% Similarity=0.381 Sum_probs=200.0
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch-hhHHHHHHHHHHhhccc-cccceeeeeeEeccCeeeEEEecc
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR-QGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~-~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
|+..+.||+|++|+||+|....+++.|+||++..... .......+|+..+.+++ |+|++++++++..++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 5667899999999999999988889999999865422 22334567899999999 999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
+|+|.+++.... ...+++.++..++.|++++|.|||+ .+++|+||+|+||+++.++.++|+|||++.......
T Consensus 81 -~~~l~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (283)
T cd07830 81 -EGNLYQLMKDRK---GKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP 153 (283)
T ss_pred -CCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCCC
Confidence 889998885442 3468999999999999999999999 899999999999999999999999999998654322
Q ss_pred CCcceecccCCcccCccccc-CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH-HH---------HHHHHHhhcC
Q 040242 515 NPQTTHIVGTLGYLAPELTR-TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV-LV---------DWVRELHSQG 583 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l~---------~~~~~~~~~~ 583 (662)
......++..|+|||.+. ...++.++||||||++++||++|+.||.......... .. .|........
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 154 --PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred --CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence 222346788999999774 4457899999999999999999999987554322211 00 1111110011
Q ss_pred ccccccCCC----CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 584 QITRAIDPT----LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 584 ~~~~~id~~----l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.....+... +..........+..++++||+.+|++||+++|++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 111111100 011111124678899999999999999999999864
No 336
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=8.4e-34 Score=300.63 Aligned_cols=265 Identities=26% Similarity=0.355 Sum_probs=206.6
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccC-----eee
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD-----ELL 428 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~-----~~~ 428 (662)
+|+..+.||+|++|.||+|+...++..||+|++.... ....+.+.+|+.++++++|+||+++++++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4778899999999999999998889999999987643 445577899999999999999999999987775 789
Q ss_pred EEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccc
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLAR 508 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~ 508 (662)
+||||++ ++|.+++... ..+++..++.++.|+++||.|||+ .+++||||||+||+++.++.++|+|||++.
T Consensus 81 lv~e~~~-~~l~~~l~~~-----~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~~ 151 (330)
T cd07834 81 IVTELME-TDLHKVIKSP-----QPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLAR 151 (330)
T ss_pred EEecchh-hhHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCceE
Confidence 9999997 5888888533 368999999999999999999999 899999999999999999999999999998
Q ss_pred cccCCCC--CcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhh----
Q 040242 509 AYDHNIN--PQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHS---- 581 (662)
Q Consensus 509 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~---- 581 (662)
....... .......++..|+|||.+.+. .++.++||||||+++++|++|+.||........... +.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~---i~~~~~~~~~ 228 (330)
T cd07834 152 GVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNL---IVEVLGTPSE 228 (330)
T ss_pred eecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHH---HHHhcCCCCh
Confidence 7655421 122334678899999999877 789999999999999999999999976543221111 110000
Q ss_pred -------cCccccccC---C----CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhcC
Q 040242 582 -------QGQITRAID---P----TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF--LLRD 632 (662)
Q Consensus 582 -------~~~~~~~id---~----~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~--L~~~ 632 (662)
.......+. . .+..........+.+++.+||+.+|.+||++.+++++ +.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 295 (330)
T cd07834 229 EDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL 295 (330)
T ss_pred hHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence 000000000 0 0011112245668899999999999999999999985 5544
No 337
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=6.4e-34 Score=298.34 Aligned_cols=267 Identities=25% Similarity=0.321 Sum_probs=197.6
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch--hhHHHHHHHHHHhhccccccceeeeeeEecc-------
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR--QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ------- 424 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~------- 424 (662)
.++|+..++||+|++|.||+|....++..++||++..... .....+.+|++++++++|+||+++++++...
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 4789999999999999999999988899999999865422 2234567899999999999999999987543
Q ss_pred -CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEee
Q 040242 425 -DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGD 503 (662)
Q Consensus 425 -~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 503 (662)
...++|+||+. ++|...+... ...+++.++..++.|+++||.|||+ .+++|+||||+||++++++.+||+|
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~----~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~~~~l~d 158 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENP----SVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQGILKIAD 158 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhcc----ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECc
Confidence 34699999996 4676666433 3468999999999999999999999 8999999999999999999999999
Q ss_pred ccccccccCCCCC----------cceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHH
Q 040242 504 FGLARAYDHNINP----------QTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVL 572 (662)
Q Consensus 504 fGla~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l 572 (662)
||+++........ ......+++.|+|||.+.+. .++.++|||||||++|||++|+.||...........
T Consensus 159 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~ 238 (311)
T cd07866 159 FGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHL 238 (311)
T ss_pred CccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 9999865433211 11234568889999987654 578999999999999999999999975543322111
Q ss_pred HHHHHHHhhc------Cccccc--------cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 573 VDWVRELHSQ------GQITRA--------IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 573 ~~~~~~~~~~------~~~~~~--------id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.......... ..+... ..+.+..........+.+++.+|++.||.+|||+.|++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 239 IFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 1110000000 000000 0111100011223567899999999999999999999853
No 338
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-34 Score=294.55 Aligned_cols=249 Identities=24% Similarity=0.345 Sum_probs=211.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
.-|...+.||+|.|..|-++++.-+|.+||||++.+.. .-....+.+|++.|+.++|||||+|++.......+|||.|
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLE 97 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILE 97 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEE
Confidence 34666788999999999999998899999999997753 3334578899999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEe-CCCCCeEEeecccccccc
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLI-DADLNPKLGDFGLARAYD 511 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll-~~~~~~kL~DfGla~~~~ 511 (662)
.=.+|+|.++|..+ ...+++....+.+.||..|+.|+|+ ..+|||||||+||.+ ..-|-+||.|||++..+.
T Consensus 98 LGD~GDl~DyImKH----e~Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 98 LGDGGDLFDYIMKH----EEGLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred ecCCchHHHHHHhh----hccccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 99999999999776 4668899999999999999999999 899999999999976 456889999999999887
Q ss_pred CCCCCcceecccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKA-TTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
.+. ..+..+|...|-|||++.+..| .++.||||+|||||.|+||+.||+.....+... .++|
T Consensus 171 PG~--kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLT---------------mImD 233 (864)
T KOG4717|consen 171 PGK--KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLT---------------MIMD 233 (864)
T ss_pred Ccc--hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhh---------------hhhc
Confidence 653 4455689999999999988776 467899999999999999999998665543322 2222
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
-. ...+.....++.+|+..||..||.+|-+.+||+..
T Consensus 234 CK-YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~ 270 (864)
T KOG4717|consen 234 CK-YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVST 270 (864)
T ss_pred cc-ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhcc
Confidence 22 23455677888999999999999999999999864
No 339
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=4.9e-34 Score=294.27 Aligned_cols=249 Identities=25% Similarity=0.372 Sum_probs=204.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccc-cccceeeeeeEeccCeeeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lV 430 (662)
++|...+.||+|++|.||++....++..|++|++... .....+.+..|+.++++++ |+||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 4688889999999999999999889999999998653 2334567889999999998 99999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
|||+++++|.+++... ..+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++...
T Consensus 81 ~e~~~~~~L~~~l~~~-----~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~ 152 (280)
T cd05581 81 LEYAPNGELLQYIRKY-----GSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVL 152 (280)
T ss_pred EcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCcccccc
Confidence 9999999999998543 369999999999999999999999 89999999999999999999999999999866
Q ss_pred cCCCC-------------------CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH
Q 040242 511 DHNIN-------------------PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV 571 (662)
Q Consensus 511 ~~~~~-------------------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~ 571 (662)
..... .......++..|+|||......++.++||||||++++++++|+.||....... .
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~--~ 230 (280)
T cd05581 153 DPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL--T 230 (280)
T ss_pred CCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH--H
Confidence 54321 12223457899999999988889999999999999999999999998554211 1
Q ss_pred HHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCH----HHHHH
Q 040242 572 LVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPST----RRVVQ 627 (662)
Q Consensus 572 l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~----~eVl~ 627 (662)
...+. ......+......+.+++.+||+.+|.+||++ +++++
T Consensus 231 -~~~~~-------------~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 231 -FQKIL-------------KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred -HHHHH-------------hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 11111 00011222335678899999999999999999 77664
No 340
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=3e-33 Score=287.56 Aligned_cols=249 Identities=23% Similarity=0.274 Sum_probs=194.1
Q ss_pred HHHHhccCCccccee--eeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcc-ccccceeeeeeEeccC
Q 040242 349 ELYSATKGFREKNLV--GSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQD 425 (662)
Q Consensus 349 el~~at~~f~~~~~L--G~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~ 425 (662)
++....++|+..+.+ |+|+||.||++..+.++..+|+|.+........ |+.....+ +|+|++++++++...+
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~ 82 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLK 82 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCC
Confidence 344445666666666 999999999999988999999999865422211 22222222 6999999999999999
Q ss_pred eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCC-CeEEeec
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADL-NPKLGDF 504 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~Df 504 (662)
..++||||+++++|.+++... ..+++.++..++.|+++||.|||+ .+++||||||+||+++.++ .++|+||
T Consensus 83 ~~~iv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 83 GHVLIMDYIKDGDLFDLLKKE-----GKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred eeEEEEEcCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEEecC
Confidence 999999999999999998543 368999999999999999999999 8999999999999999998 9999999
Q ss_pred cccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCc
Q 040242 505 GLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQ 584 (662)
Q Consensus 505 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 584 (662)
|+++..... ....++..|+|||++.+..++.++||||||+++|||++|+.||...... ......+....
T Consensus 155 g~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~----- 223 (267)
T PHA03390 155 GLCKIIGTP-----SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE-ELDLESLLKRQ----- 223 (267)
T ss_pred ccceecCCC-----ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc-hhhHHHHHHhh-----
Confidence 998865432 1235789999999998888999999999999999999999999743322 12222222211
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCC-HHHHHH
Q 040242 585 ITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPS-TRRVVQ 627 (662)
Q Consensus 585 ~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-~~eVl~ 627 (662)
.... .........+.+++.+||+.+|.+||+ ++++++
T Consensus 224 -----~~~~-~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 224 -----QKKL-PFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred -----cccC-CcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 0111 111234566888999999999999996 688875
No 341
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=2.6e-33 Score=296.87 Aligned_cols=260 Identities=22% Similarity=0.287 Sum_probs=195.1
Q ss_pred ceeeee--CceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSG--GFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G--~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
..||+| +||+||++++..+|+.||+|.+... .....+.+.+|+.+++.++||||+++++++..++..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356666 8999999999889999999998653 233457788999999999999999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
++|.+++.... ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++++||+.+.........
T Consensus 84 ~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~ 157 (328)
T cd08226 84 GSANSLLKTYF---PEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQK 157 (328)
T ss_pred CCHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcc
Confidence 99999986542 2458899999999999999999998 89999999999999999999999999865433221111
Q ss_pred c------ceecccCCcccCcccccCC--CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHH---------
Q 040242 517 Q------TTHIVGTLGYLAPELTRTG--KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVREL--------- 579 (662)
Q Consensus 517 ~------~~~~~gt~~y~aPE~~~~~--~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~--------- 579 (662)
. .....++..|+|||++.+. .++.++|||||||++|||++|+.||........ ........
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~ 235 (328)
T cd08226 158 AKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM--LLQKLKGPPYSPLDITT 235 (328)
T ss_pred ccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH--HHHHhcCCCCCCccccc
Confidence 0 0112345679999998663 478999999999999999999999975432211 11100000
Q ss_pred --------------hhc---------CccccccCCCC-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 580 --------------HSQ---------GQITRAIDPTL-DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 580 --------------~~~---------~~~~~~id~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
... +......+..+ ..........+.+|+++||+.||++|||+.|++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 236 FPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred cchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000 00000011111 11123456678999999999999999999999874
No 342
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2e-33 Score=295.11 Aligned_cols=248 Identities=29% Similarity=0.415 Sum_probs=198.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
+.|+..+.||+|++|.||+|+...++..+++|.+... .....+++.+|+++++.++|+|++++++++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 3466678899999999999999888999999998642 3344567889999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+. |+|.+++... ...+++.++..++.|++.||.|||+ .+++||||+|+||+++.++.++|+|||++....
T Consensus 95 e~~~-~~l~~~~~~~----~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~ 166 (308)
T cd06634 95 EYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA 166 (308)
T ss_pred EccC-CCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeec
Confidence 9996 6887776433 3458899999999999999999999 899999999999999999999999999987654
Q ss_pred CCCCCcceecccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccc
Q 040242 512 HNINPQTTHIVGTLGYLAPELTR---TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRA 588 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 588 (662)
.. ....++..|+|||.+. ....+.++|||||||++|||++|+.|+......... ..+. .+.
T Consensus 167 ~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~--~~~~-----~~~---- 230 (308)
T cd06634 167 PA-----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL--YHIA-----QNE---- 230 (308)
T ss_pred Cc-----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHH--HHHh-----hcC----
Confidence 32 2345788999999874 356788999999999999999999998654322111 1111 110
Q ss_pred cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 589 IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 589 id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
.+.. ........+..++.+||+.+|.+||++.+++++.
T Consensus 231 -~~~~--~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 231 -SPAL--QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred -CCCc--CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 0111 1223456688999999999999999999999864
No 343
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=5.1e-34 Score=303.03 Aligned_cols=266 Identities=24% Similarity=0.373 Sum_probs=201.9
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEec----cCee
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRK----QDEL 427 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~----~~~~ 427 (662)
..+|+..+.||+|++|.||+|....++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 367888999999999999999998899999999987542 2345677889999999999999999998753 3468
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccc
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLA 507 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla 507 (662)
++||||+. ++|.+++... ..+++.....++.|+++||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 84 ~lv~e~~~-~~l~~~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~dfg~~ 154 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSD-----QPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIGDFGMA 154 (334)
T ss_pred EEEEehhh-hhHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEecccccc
Confidence 99999995 6898888532 348999999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCC---cceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHH-------
Q 040242 508 RAYDHNINP---QTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWV------- 576 (662)
Q Consensus 508 ~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~------- 576 (662)
......... ......++..|+|||.+.+ ..++.++|||||||++|||++|+.||.............-.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~ 234 (334)
T cd07855 155 RGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEE 234 (334)
T ss_pred eeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhH
Confidence 865432211 1123468899999998765 46889999999999999999999999754432211100000
Q ss_pred -HHHhhcCccccc---cCCCC----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 577 -RELHSQGQITRA---IDPTL----DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 577 -~~~~~~~~~~~~---id~~l----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.+........+. ..... ....+.....+.+++.+||+.+|++||++.+++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 235 VLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred hhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 000000000000 00000 11112345778999999999999999999999985
No 344
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.8e-33 Score=287.32 Aligned_cols=244 Identities=25% Similarity=0.274 Sum_probs=190.8
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHH-hhccccccceeeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITS-MGRLRHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~-l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
+.||+|++|.||+|....+++.||+|.+.... ......+..|..+ ....+|+|++++++++..++..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56999999999999998889999999986543 2223344555544 4455899999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
++|.+++... ..+++..+..++.|+++||.|||+ .+++|+||+|+||++++++.+||+|||+++....
T Consensus 82 ~~L~~~l~~~-----~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---- 149 (260)
T cd05611 82 GDCASLIKTL-----GGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---- 149 (260)
T ss_pred CCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccc----
Confidence 9999998532 458899999999999999999999 8999999999999999999999999999875433
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYF 596 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 596 (662)
.....++..|+|||.+.+..++.++||||||+++|||++|..||........ . .....+... ..+ ..
T Consensus 150 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~-----~~~~~~~~~--~~~---~~ 216 (260)
T cd05611 150 -NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAV--F-----DNILSRRIN--WPE---EV 216 (260)
T ss_pred -cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHH--H-----HHHHhcccC--CCC---cc
Confidence 2234578899999999888889999999999999999999999975432211 0 111111100 001 11
Q ss_pred CHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 597 DPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 597 ~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
.......+.+++.+||+.+|++||++.++.+.|
T Consensus 217 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 217 KEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred cccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 123456688999999999999999776555543
No 345
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=1.7e-33 Score=292.32 Aligned_cols=256 Identities=22% Similarity=0.333 Sum_probs=200.4
Q ss_pred CCcccceeeeeCceEEEEEEeC---CCCcEEEEEEeeccc----hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCee
Q 040242 356 GFREKNLVGSGGFGKVYRGVIP---STGLEVAIKRVAHNS----RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDEL 427 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~---~~g~~vavK~~~~~~----~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~ 427 (662)
+|+..+.||+|++|.||++... .++..||||.+.... ....+.+.+|+.++.++ +|+||+++++++..+...
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 3677889999999999999863 356889999986532 23345688999999999 599999999999999999
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccc
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLA 507 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla 507 (662)
++||||+++++|.+++.. ...+++.....++.|++++|.|||+ .+++||||+|+||+++.++.++|+|||++
T Consensus 81 ~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~~ 152 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ-----REHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGLS 152 (288)
T ss_pred EEEEecCCCCcHHHHHhh-----cCCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECccc
Confidence 999999999999999853 2458889999999999999999999 89999999999999999999999999998
Q ss_pred ccccCCCCCcceecccCCcccCcccccCCC--CCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcc
Q 040242 508 RAYDHNINPQTTHIVGTLGYLAPELTRTGK--ATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQI 585 (662)
Q Consensus 508 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 585 (662)
+..............|+..|+|||.+.+.. .+.++||||||+++|||++|+.||....... ...+........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~--- 227 (288)
T cd05583 153 KEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN--SQSEISRRILKS--- 227 (288)
T ss_pred cccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc--hHHHHHHHHHcc---
Confidence 875543322233346889999999987655 7889999999999999999999986432111 011111111110
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 586 TRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 586 ~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
.+. .+......+.+++.+||+.+|++|||+.+|.+.|+-
T Consensus 228 ----~~~---~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 228 ----KPP---FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ----CCC---CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 111 122234557788999999999999999888776654
No 346
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=5.2e-33 Score=292.57 Aligned_cols=245 Identities=27% Similarity=0.422 Sum_probs=195.9
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
|...+.||+|++|+||+|+...++..|++|++... .......+.+|+.++++++|+|++++++++......++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 44567799999999999999888999999998653 233446788999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
+. ++|.+++... ...+++.++..++.|++.+|.|||+ .+++|+||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~~----~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~- 173 (313)
T cd06633 103 CL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP- 173 (313)
T ss_pred CC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCC-
Confidence 95 6777777433 3458999999999999999999999 8999999999999999999999999998864322
Q ss_pred CCCcceecccCCcccCccccc---CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 514 INPQTTHIVGTLGYLAPELTR---TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~---~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
.....|+..|+|||++. .+.++.++|||||||++|||++|+.|+......... ..... .. .
T Consensus 174 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~------~~~~~-~~-----~ 237 (313)
T cd06633 174 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL------YHIAQ-ND-----S 237 (313)
T ss_pred ----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH------HHHHh-cC-----C
Confidence 12346888999999874 456888999999999999999999998754322111 11100 00 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+.. ........+..++.+||+.+|.+||++.+++++
T Consensus 238 ~~~--~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 238 PTL--QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred CCC--CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111 111233457889999999999999999999975
No 347
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.3e-33 Score=291.68 Aligned_cols=252 Identities=22% Similarity=0.340 Sum_probs=197.6
Q ss_pred CCcccceeeeeCceEEEEEEeC---CCCcEEEEEEeeccc----hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCee
Q 040242 356 GFREKNLVGSGGFGKVYRGVIP---STGLEVAIKRVAHNS----RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDEL 427 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~---~~g~~vavK~~~~~~----~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~ 427 (662)
+|+..+.||+|+||.||++... .+|..||+|++.... ....+.+.+|+.++.++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 4677899999999999999874 368899999986532 22346678899999999 599999999999999999
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccc
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLA 507 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla 507 (662)
++||||+++++|.+++.. ...+++.....++.|+++||.|||+ .+++||||+|+||+++.++.+||+|||++
T Consensus 81 ~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~ 152 (290)
T cd05613 81 HLILDYINGGELFTHLSQ-----RERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLS 152 (290)
T ss_pred EEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCccc
Confidence 999999999999999853 3457888999999999999999999 89999999999999999999999999999
Q ss_pred ccccCCCCCcceecccCCcccCcccccCC--CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcc
Q 040242 508 RAYDHNINPQTTHIVGTLGYLAPELTRTG--KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQI 585 (662)
Q Consensus 508 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 585 (662)
+..............|+..|+|||.+... ..+.++||||||+++|+|++|+.|+....... ...++.......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~--~~~~~~~~~~~~--- 227 (290)
T cd05613 153 KEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKN--SQAEISRRILKS--- 227 (290)
T ss_pred eecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccc--cHHHHHHHhhcc---
Confidence 87654332333345688999999988653 46789999999999999999999986432211 111111111110
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 040242 586 TRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRP-----STRRVVQ 627 (662)
Q Consensus 586 ~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~eVl~ 627 (662)
.+ .++......+..++.+|++.+|++|| +..+++.
T Consensus 228 ----~~---~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 228 ----EP---PYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ----CC---CCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 11 12223456678999999999999997 5666655
No 348
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-34 Score=307.16 Aligned_cols=249 Identities=23% Similarity=0.413 Sum_probs=197.1
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeec----cchhhHHHHHHHHHHhhccccccceeeeeeEeccC--eeeEEEec
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAH----NSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD--ELLLVYDY 433 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~----~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~--~~~lV~E~ 433 (662)
..+||+|.|-+||||.+..+|..||=-.++. ......+.|..|+.+|+.|+||||++++.++.+.. ..-+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 4679999999999999988998887432221 23455688999999999999999999999887655 48899999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC-CCeEEeeccccccccC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD-LNPKLGDFGLARAYDH 512 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~DfGla~~~~~ 512 (662)
|..|+|..|+++. ..++.+...+|++||++||.|||+. .++|||||||..||+|+.+ |.|||+|+|||.....
T Consensus 125 ~TSGtLr~Y~kk~-----~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~ 198 (632)
T KOG0584|consen 125 FTSGTLREYRKKH-----RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRK 198 (632)
T ss_pred ccCCcHHHHHHHh-----ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhc
Confidence 9999999999665 3477889999999999999999985 5899999999999999765 8899999999998754
Q ss_pred CCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
. ....+.|||.|||||+.. ..|.+..||||||++++||+|+..||..=....+.. .-| ..|..-..+
T Consensus 199 s---~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIY--KKV----~SGiKP~sl--- 265 (632)
T KOG0584|consen 199 S---HAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIY--KKV----TSGIKPAAL--- 265 (632)
T ss_pred c---ccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHH--HHH----HcCCCHHHh---
Confidence 3 233478999999999887 678999999999999999999999996322221111 111 112111111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH--HHhcC
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ--FLLRD 632 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~--~L~~~ 632 (662)
..-...++.++|.+|+.. .++|||+.|+++ +|..+
T Consensus 266 ----~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d 302 (632)
T KOG0584|consen 266 ----SKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDED 302 (632)
T ss_pred ----hccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccc
Confidence 112234578899999999 999999999997 56543
No 349
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-34 Score=300.92 Aligned_cols=250 Identities=24% Similarity=0.370 Sum_probs=199.4
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeec--cchhhHHHHHHHHHHhhccc-cccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAH--NSRQGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~--~~~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lV~ 431 (662)
+.|++.++||+||.+.||++... +...+|+|++.. ...+...-|.+|+..|.+|+ |.+|++|++|-..++.+|+||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 46888999999999999999884 455678776643 35566788999999999995 999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||= .-+|..+|.+.. .....| .+..+..||+.++.++|+ .+|||.||||.|+|+= .|.+||+|||+|..+.
T Consensus 440 E~G-d~DL~kiL~k~~---~~~~~~-~lk~ywkqML~aV~~IH~---~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKK---SIDPDW-FLKFYWKQMLLAVKTIHQ---HGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQ 510 (677)
T ss_pred ecc-cccHHHHHHhcc---CCCchH-HHHHHHHHHHHHHHHHHH---hceeecCCCcccEEEE-eeeEEeeeechhcccC
Confidence 986 678999996553 333445 677889999999999999 8999999999999884 5789999999999887
Q ss_pred CCCC-CcceecccCCcccCcccccCC-----------CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHH
Q 040242 512 HNIN-PQTTHIVGTLGYLAPELTRTG-----------KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVREL 579 (662)
Q Consensus 512 ~~~~-~~~~~~~gt~~y~aPE~~~~~-----------~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~ 579 (662)
.+.. ......+||+.||+||.+... +.++++||||+|||||+|+.|+.||..... .|
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n-------~~---- 579 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN-------QI---- 579 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH-------HH----
Confidence 6533 344567999999999987422 257899999999999999999999974321 11
Q ss_pred hhcCccccccCCCC-CCCCH-HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 580 HSQGQITRAIDPTL-DYFDP-QEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 580 ~~~~~~~~~id~~l-~~~~~-~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.++....||.- .+++. .....+++++..||..||.+||+..|++++
T Consensus 580 ---aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 580 ---AKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ---HHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 13344556643 12221 122238999999999999999999999985
No 350
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=8.9e-33 Score=288.19 Aligned_cols=256 Identities=18% Similarity=0.248 Sum_probs=187.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCC---CcEEEEEEeeccchhh-----------HHHHHHHHHHhhccccccceeeeee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPST---GLEVAIKRVAHNSRQG-----------MKEFVAEITSMGRLRHRNLVQLHGW 420 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~---g~~vavK~~~~~~~~~-----------~~~f~~Ei~~l~~l~H~niv~l~~~ 420 (662)
++|+..++||+|+||+||+|....+ +..+++|......... ......+...+..+.|+|+++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 6789999999999999999998766 5667777643322111 0122334455667789999999998
Q ss_pred EeccC----eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC
Q 040242 421 CRKQD----ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD 496 (662)
Q Consensus 421 ~~~~~----~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~ 496 (662)
+.... ..++++|++. .++.+.+.. ....++..+..++.|+++||.|||+ .+|+||||||+|||++.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 92 GSFKRCRMYYRFILLEKLV-ENTKEIFKR-----IKCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDGN 162 (294)
T ss_pred eeEecCCceEEEEEEehhc-cCHHHHHHh-----hccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCC
Confidence 76544 3467788773 456555532 1235678889999999999999999 899999999999999999
Q ss_pred CCeEEeeccccccccCCCC------CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhH
Q 040242 497 LNPKLGDFGLARAYDHNIN------PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMEL 570 (662)
Q Consensus 497 ~~~kL~DfGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~ 570 (662)
+.++|+|||+++.+..... .......||+.|+|||...+..++.++|||||||+++||++|+.||.........
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~ 242 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL 242 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH
Confidence 9999999999987643211 1122346999999999999889999999999999999999999999865322211
Q ss_pred H---HHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 571 V---LVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 571 ~---l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
. ..++..... . +.+. .......+.+++..|++.+|++||++.++.+.|.
T Consensus 243 ~~~~~~~~~~~~~-~--------~~~~--~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~~ 294 (294)
T PHA02882 243 IHAAKCDFIKRLH-E--------GKIK--IKNANKFIYDFIECVTKLSYEEKPDYDALIKIFD 294 (294)
T ss_pred HHHhHHHHHHHhh-h--------hhhc--cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhhC
Confidence 1 111211111 1 1110 1122466889999999999999999999998763
No 351
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.4e-33 Score=299.25 Aligned_cols=270 Identities=23% Similarity=0.321 Sum_probs=203.9
Q ss_pred cchHHHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEe
Q 040242 345 FRYSELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCR 422 (662)
Q Consensus 345 ~~~~el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~ 422 (662)
....++...+++|+..+.||+|+||.||+|....++..||+|++.... ....+.+.+|+.++++++|+||+++++++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 345667788899999999999999999999998889999999986532 233466888999999999999999999885
Q ss_pred cc------CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC
Q 040242 423 KQ------DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD 496 (662)
Q Consensus 423 ~~------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~ 496 (662)
.. ...+++++++ +++|.+++.. ..+++..+..++.|+++||+|||+ .+++||||||+||+++++
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~ 156 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNED 156 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEcCC
Confidence 43 3468888887 8899888742 358899999999999999999999 899999999999999999
Q ss_pred CCeEEeeccccccccCCCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHH-HH
Q 040242 497 LNPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVL-VD 574 (662)
Q Consensus 497 ~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l-~~ 574 (662)
+.+||+|||+++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||........... ..
T Consensus 157 ~~~kl~dfg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~ 232 (345)
T cd07877 157 CELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 232 (345)
T ss_pred CCEEEeccccccccccc----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 99999999998864332 223467889999998765 4678899999999999999999999965433211110 00
Q ss_pred H-------HHHHhhcC---ccccccCC----CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 575 W-------VRELHSQG---QITRAIDP----TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 575 ~-------~~~~~~~~---~~~~~id~----~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
. +....... ...+.+.. ............+.+++.+|++.||.+||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 233 LVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0 00000000 00000000 0000011224567899999999999999999999975
No 352
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=5.2e-33 Score=294.53 Aligned_cols=265 Identities=26% Similarity=0.354 Sum_probs=202.9
Q ss_pred HHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEec-cC
Q 040242 349 ELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRK-QD 425 (662)
Q Consensus 349 el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~-~~ 425 (662)
++...+++|+..+.||+|+||.||++....++..||+|++... .....+.+..|+.++++++||||+++++++.. ..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 83 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE 83 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence 4556788999999999999999999999889999999988543 22345678899999999999999999998865 55
Q ss_pred eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecc
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFG 505 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 505 (662)
..++++||+ +++|.+++.. ..+++.....++.|+++||.|||+ .+++||||+|+||+++.++.+||+|||
T Consensus 84 ~~~lv~e~~-~~~L~~~~~~------~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~~l~dfg 153 (328)
T cd07856 84 DIYFVTELL-GTDLHRLLTS------RPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDLKICDFG 153 (328)
T ss_pred cEEEEeehh-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCEEeCccc
Confidence 789999999 6689888742 347788888999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH-HHH--------H
Q 040242 506 LARAYDHNINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV-LVD--------W 575 (662)
Q Consensus 506 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l~~--------~ 575 (662)
++...... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......... +.+ |
T Consensus 154 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~ 229 (328)
T cd07856 154 LARIQDPQ----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDV 229 (328)
T ss_pred cccccCCC----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 98854332 122456889999998765 568999999999999999999999997544321111 111 1
Q ss_pred HHHHhhcCccccccCC-CC-CCCC-----HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 576 VRELHSQGQITRAIDP-TL-DYFD-----PQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 576 ~~~~~~~~~~~~~id~-~l-~~~~-----~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
....... ...+.+.. .. ...+ ......+.+++.+|++.+|++||++.+++.+
T Consensus 230 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 230 INTICSE-NTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHhccch-hhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1110000 00010000 00 0011 1234678899999999999999999999875
No 353
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-34 Score=292.73 Aligned_cols=249 Identities=24% Similarity=0.353 Sum_probs=206.6
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
+.|..-++||+||||.||-++...+|+.+|.|++.+. .+++....++|-.+|.+++.+.||.+--.++.++.++||+
T Consensus 185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVL 264 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVL 264 (591)
T ss_pred cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEE
Confidence 5688889999999999999999999999999998654 3444556789999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
..|.||+|.-+|.+.. ...+++...+-.+.+|+.||.+||. ..||.|||||+|||||+.|+++|+|+|||..+.
T Consensus 265 tlMNGGDLkfHiyn~g---~~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 265 TLMNGGDLKFHIYNHG---NPGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EeecCCceeEEeeccC---CCCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeeccCCCeEeeccceEEecC
Confidence 9999999999998775 4678999999999999999999999 899999999999999999999999999999776
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
... .....+||.+|||||+++++.|+...|.||+||+||||+.|+.||..........- +.+ .+-.
T Consensus 339 ~g~--~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eE---vdr---------r~~~ 404 (591)
T KOG0986|consen 339 EGK--PIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREE---VDR---------RTLE 404 (591)
T ss_pred CCC--ccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHH---HHH---------HHhc
Confidence 542 22334899999999999999999999999999999999999999986543211100 000 0000
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTR 623 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 623 (662)
.-..++....++...|.+..|+.||.+|---+
T Consensus 405 ~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 405 DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred chhhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 11234455666777788889999999997543
No 354
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=3e-33 Score=297.14 Aligned_cols=263 Identities=26% Similarity=0.301 Sum_probs=199.1
Q ss_pred cCCcc-cceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhh--------------HHHHHHHHHHhhccccccceeeee
Q 040242 355 KGFRE-KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQG--------------MKEFVAEITSMGRLRHRNLVQLHG 419 (662)
Q Consensus 355 ~~f~~-~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~--------------~~~f~~Ei~~l~~l~H~niv~l~~ 419 (662)
++|.. .+.||+|+||+||+|.+...++.||||++....... ...+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45543 577999999999999998889999999986542211 125778999999999999999999
Q ss_pred eEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCe
Q 040242 420 WCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNP 499 (662)
Q Consensus 420 ~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~ 499 (662)
++...+..++||||++ ++|.+++.. ...+++.....++.|++.||.|||+ .+++|+||+|+||+++.++.+
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~-----~~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~~~~~ 158 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDR-----KIRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINSKGIC 158 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECCCCCE
Confidence 9999999999999996 689888843 3458899999999999999999999 899999999999999999999
Q ss_pred EEeeccccccccCCC-------------CCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccc
Q 040242 500 KLGDFGLARAYDHNI-------------NPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQR 565 (662)
Q Consensus 500 kL~DfGla~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~ 565 (662)
||+|||+++...... ........++..|+|||.+.+. .++.++|||||||++|||++|+.||....
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 238 (335)
T PTZ00024 159 KIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGEN 238 (335)
T ss_pred EECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999998665111 1111223467899999988754 46889999999999999999999997654
Q ss_pred chhhHHHHHHHHHHhhcCc---ccc------------ccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 566 TAMELVLVDWVRELHSQGQ---ITR------------AIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 566 ~~~~~~l~~~~~~~~~~~~---~~~------------~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
..... ..+........ ..+ ...+............+.+++.+||+.+|++||++.|++.+-
T Consensus 239 ~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~ 314 (335)
T PTZ00024 239 EIDQL---GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHE 314 (335)
T ss_pred HHHHH---HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCc
Confidence 32211 11111111000 000 000111111122346688999999999999999999999753
No 355
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=303.67 Aligned_cols=251 Identities=23% Similarity=0.391 Sum_probs=207.7
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCC
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
+.+..-||.|+||.||+++.+.++-..|-|.+...+.+..++|+-||++|....||+||+|++.|+..+.++++.|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 44566799999999999999888888889999988889999999999999999999999999999999999999999999
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|-.+.++..- ...|...++.-++.|++.||.|||+ +.|||||||+.|||++-+|.++|+|||.+-..... ..
T Consensus 114 GAVDaimlEL----~r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t-~q 185 (1187)
T KOG0579|consen 114 GAVDAIMLEL----GRVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST-RQ 185 (1187)
T ss_pred chHhHHHHHh----ccccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccccchhH-Hh
Confidence 9999988544 4679999999999999999999999 89999999999999999999999999987643221 22
Q ss_pred cceecccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 517 QTTHIVGTLGYLAPELTR-----TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
......||+.|||||+.. ...|..++||||||+.|.||..+.+|-....+ ...+... . .-+|
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp--MRVllKi----------a-KSeP 252 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP--MRVLLKI----------A-KSEP 252 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch--HHHHHHH----------h-hcCC
Confidence 334578999999999764 45788999999999999999999998654322 1111111 1 1122
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.--..+......+.++..+||..||..||++.+++++
T Consensus 253 PTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 253 PTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred CcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 2222344556678888889999999999999999875
No 356
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=6.1e-33 Score=291.84 Aligned_cols=258 Identities=22% Similarity=0.276 Sum_probs=191.7
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGS 438 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gs 438 (662)
+.+|.|++ ||.++...+++.||||++... .....+.+..|+.++++++|+||+++++++...+..+++|||+++++
T Consensus 8 ~~~~~~~~--v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 8 KCFEDLMI--VHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred HhhcCCce--EEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 33444444 455555458899999998764 34556789999999999999999999999999999999999999999
Q ss_pred cchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC---
Q 040242 439 LDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN--- 515 (662)
Q Consensus 439 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~--- 515 (662)
|.+++.... ...+++.....++.|+++||+|||+ .+|+||||||+||+++.++.+||+|||.+........
T Consensus 86 l~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 86 CEDLLKTHF---PEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred HHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 999996542 3458888999999999999999999 8999999999999999999999999998875532211
Q ss_pred ---CcceecccCCcccCcccccCC--CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHh----h-----
Q 040242 516 ---PQTTHIVGTLGYLAPELTRTG--KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELH----S----- 581 (662)
Q Consensus 516 ---~~~~~~~gt~~y~aPE~~~~~--~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~----~----- 581 (662)
.......++..|+|||.+... .++.++|||||||++|||++|+.||....... .+.+...... .
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 237 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ--MLLEKVRGTVPCLLDKSTYP 237 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHhccCccccccCchh
Confidence 111234567889999998653 57889999999999999999999997543221 1111111000 0
Q ss_pred --cCcccc----ccCCCC-----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 582 --QGQITR----AIDPTL-----DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 582 --~~~~~~----~id~~l-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.....+ ..++.. ..........+.+++.+||+.||++||++++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 238 LYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred hhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000000 001110 11223345678899999999999999999999974
No 357
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=2.6e-33 Score=289.37 Aligned_cols=263 Identities=26% Similarity=0.359 Sum_probs=201.9
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
|+..+.||+|++|.||+|+...+++.+++|.+.... ....+.+..|+.++++++|+|++++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 456788999999999999998889999999997653 334567889999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
+ ++|.+++... ...+++..++.++.|++.||.|||+ .+++||||+|+||++++++.+||+|||+++......
T Consensus 81 ~-~~l~~~i~~~----~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 152 (282)
T cd07829 81 D-MDLKKYLDKR----PGPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL 152 (282)
T ss_pred C-cCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCCc
Confidence 7 5899998643 2468999999999999999999999 899999999999999999999999999998765432
Q ss_pred CCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH-HHH-------HHHHHhhcCcc
Q 040242 515 NPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV-LVD-------WVRELHSQGQI 585 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l~~-------~~~~~~~~~~~ 585 (662)
. ......++..|+|||.+.+. .++.++|||||||+++||++|+.||.......... +.. ..+.....-..
T Consensus 153 ~-~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 153 R-TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred c-ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccc
Confidence 2 22233457789999988766 78999999999999999999999997644321110 000 00000000000
Q ss_pred ccccCCCC-----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 586 TRAIDPTL-----DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 586 ~~~id~~l-----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
....-+.. ....+.....+.+++.+||+.+|++||++++++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 232 YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred ccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000010 01111225678999999999999999999999863
No 358
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=6.9e-33 Score=286.52 Aligned_cols=243 Identities=23% Similarity=0.333 Sum_probs=189.8
Q ss_pred eeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHH---HhhccccccceeeeeeEeccCeeeEEEeccC
Q 040242 362 LVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEIT---SMGRLRHRNLVQLHGWCRKQDELLLVYDYVP 435 (662)
Q Consensus 362 ~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~---~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 435 (662)
+||+|+||.||++....+++.||+|.+.... ......+..|.. .++...||||+++++++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999998889999999986542 122223444443 3444579999999999999999999999999
Q ss_pred CCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC
Q 040242 436 NGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN 515 (662)
Q Consensus 436 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~ 515 (662)
+++|.+++.. ...+++.++..++.|+++||.|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 81 g~~L~~~l~~-----~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~- 151 (278)
T cd05606 81 GGDLHYHLSQ-----HGVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK- 151 (278)
T ss_pred CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC-
Confidence 9999988843 3468999999999999999999999 899999999999999999999999999987654321
Q ss_pred CcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 516 PQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 516 ~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
.....|+..|+|||.+.++ .++.++||||+||++|||++|+.||........... ... ....++.+
T Consensus 152 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~----~~~------~~~~~~~~- 218 (278)
T cd05606 152 --PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI----DRM------TLTMAVEL- 218 (278)
T ss_pred --CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH----HHH------hhccCCCC-
Confidence 1234689999999998754 588999999999999999999999975432211111 000 00111112
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHHH
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRP-----STRRVVQF 628 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~eVl~~ 628 (662)
+......+.+++.+|+..+|.+|| ++.+++++
T Consensus 219 --~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 219 --PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred --CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 222356788899999999999999 99999863
No 359
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=3e-33 Score=285.74 Aligned_cols=252 Identities=21% Similarity=0.344 Sum_probs=198.3
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc-----chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-----SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-----~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
+|...+.||+|+||.||++.....+..+++|.++.. ......++..|+.++++++||||+++++++...+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 477789999999999999998766666666665432 122334567899999999999999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
|||+++++|.+++..... ....+++.+++.++.|+++||.|||+ .+++|+||+|+||+++. +.+||+|||++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~ 155 (260)
T cd08222 81 TEYCEGRDLDCKLEELKH-TGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLL 155 (260)
T ss_pred EEeCCCCCHHHHHHHHhh-cccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeec
Confidence 999999999998864321 24568999999999999999999999 89999999999999975 56999999998865
Q ss_pred cCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
..... ......|+..|+|||.+.+..++.++|+||||+++|+|++|+.|+...... ....... .
T Consensus 156 ~~~~~-~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~------~~~~~~~---------~ 219 (260)
T cd08222 156 MGSCD-LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFL------SVVLRIV---------E 219 (260)
T ss_pred CCCcc-cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH------HHHHHHH---------c
Confidence 43221 222345788999999988888899999999999999999999998643221 1111110 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
......+......+.+++.+||+.+|++||++.|++++
T Consensus 220 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 220 GPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred CCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 11112233455678899999999999999999999874
No 360
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.2e-32 Score=292.27 Aligned_cols=263 Identities=23% Similarity=0.311 Sum_probs=195.0
Q ss_pred CCcccceeeeeCceEEEEEEeCCC--CcEEEEEEeecc--chhhHHHHHHHHHHhhcc-ccccceeeeeeEecc----Ce
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPST--GLEVAIKRVAHN--SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQ----DE 426 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~--g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~----~~ 426 (662)
+|+..+.||+|+||.||++..... +..||+|++... .....+.+.+|+.++.++ +||||+++++.+... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 477789999999999999999877 889999998653 223356788999999999 599999999976433 35
Q ss_pred eeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccc
Q 040242 427 LLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGL 506 (662)
Q Consensus 427 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGl 506 (662)
.++++||+. ++|.+++.. ...+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||+
T Consensus 81 ~~~~~e~~~-~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~ 151 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS-----GQPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGL 151 (332)
T ss_pred EEEEEeccc-CCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCC
Confidence 788899985 689888843 3458899999999999999999999 8999999999999999999999999999
Q ss_pred cccccCCCCC---cceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHH-H--------
Q 040242 507 ARAYDHNINP---QTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVL-V-------- 573 (662)
Q Consensus 507 a~~~~~~~~~---~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l-~-------- 573 (662)
++........ ......|+..|+|||.+.+ ..++.++||||+||++|+|++|+.||........... .
T Consensus 152 a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (332)
T cd07857 152 ARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE 231 (332)
T ss_pred ceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCH
Confidence 9866533221 1233468999999998765 4678999999999999999999999875432211100 0
Q ss_pred HHHHHHhhcC------ccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 574 DWVRELHSQG------QITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 574 ~~~~~~~~~~------~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
++....-... .....-...+....+.....+..++.+|++.||.+||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000 00000000111111123456889999999999999999999986
No 361
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.6e-33 Score=298.69 Aligned_cols=262 Identities=23% Similarity=0.350 Sum_probs=197.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEecc----------
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ---------- 424 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~---------- 424 (662)
.+|...+.||.|+||.||+|....++..||+|++........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 6788899999999999999999889999999999776666677889999999999999999999876543
Q ss_pred ----CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCC-CCCe
Q 040242 425 ----DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDA-DLNP 499 (662)
Q Consensus 425 ----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~ 499 (662)
...++||||++ ++|.+++. ...+++.....++.||++||.|||+ .+++||||||+||+++. ++.+
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~------~~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE------QGPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCceE
Confidence 35789999996 58888773 2358899999999999999999999 89999999999999974 5678
Q ss_pred EEeeccccccccCCCCC--cceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHH
Q 040242 500 KLGDFGLARAYDHNINP--QTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWV 576 (662)
Q Consensus 500 kL~DfGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~ 576 (662)
||+|||+++........ ......++..|+|||.+.. ..++.++|||||||++|||++|+.||........... ..
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~--~~ 232 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQL--IL 232 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH--HH
Confidence 99999999865432111 1122357889999997654 4578899999999999999999999975543221110 00
Q ss_pred HHHhh-----cCccc----ccc-----CCC--CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 577 RELHS-----QGQIT----RAI-----DPT--LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 577 ~~~~~-----~~~~~----~~i-----d~~--l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
..... ..... +.. .+. ...........+.+++.+||+.||.+||++.+++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 233 ESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred HhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 00000 00000 000 000 000111234567889999999999999999999964
No 362
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=7e-34 Score=273.40 Aligned_cols=250 Identities=25% Similarity=0.383 Sum_probs=201.1
Q ss_pred cccceeeeeCceEEEEEEeCCCCcEEEEEEeecc-chhhHHHHHHHHHHhhccc-cccceeeeeeEeccCeeeEEEeccC
Q 040242 358 REKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQDELLLVYDYVP 435 (662)
Q Consensus 358 ~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lV~E~~~ 435 (662)
+....||.|..|.|++...+.+|...|||.+... ..+..++++..+.++.+-+ +|+||+.+||+..+...++.||.|
T Consensus 95 ~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelM- 173 (391)
T KOG0983|consen 95 ENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELM- 173 (391)
T ss_pred hhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHH-
Confidence 3466799999999999999999999999999765 5666778888888777664 999999999999999999999999
Q ss_pred CCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC
Q 040242 436 NGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN 515 (662)
Q Consensus 436 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~ 515 (662)
...++.+|..- ..++++.-.=++...+..||.||.+. ++|+|||+||+|||+|+.|++||||||++..+-..
T Consensus 174 s~C~ekLlkri----k~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS-- 245 (391)
T KOG0983|consen 174 STCAEKLLKRI----KGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS-- 245 (391)
T ss_pred HHHHHHHHHHh----cCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeecc--
Confidence 55777777544 45677777778889999999999985 89999999999999999999999999999765432
Q ss_pred CcceecccCCcccCcccccC---CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCC
Q 040242 516 PQTTHIVGTLGYLAPELTRT---GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 516 ~~~~~~~gt~~y~aPE~~~~---~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
...+..+|-+.|||||.+.- .+|.-++||||||+.|+||.||+.||..-..+-+. +. ++.+...|.
T Consensus 246 kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~-lt----------kvln~ePP~ 314 (391)
T KOG0983|consen 246 KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEV-LT----------KVLNEEPPL 314 (391)
T ss_pred cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHH-HH----------HHHhcCCCC
Confidence 23445689999999998854 35788999999999999999999999865433211 11 112222244
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
|.. .......+++++..||+.|+.+||...+++++
T Consensus 315 L~~-~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 315 LPG-HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred CCc-ccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 421 22356778889999999999999999999874
No 363
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=7.1e-34 Score=277.79 Aligned_cols=288 Identities=25% Similarity=0.359 Sum_probs=214.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCC----cEEEEEEeeccch--hhHHHHHHHHHHhhccccccceeeeeeEec-cCee
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTG----LEVAIKRVAHNSR--QGMKEFVAEITSMGRLRHRNLVQLHGWCRK-QDEL 427 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g----~~vavK~~~~~~~--~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~-~~~~ 427 (662)
..|+....||+|.||.||+|+...++ ..+|+|+++.+.. .......+|+.++++++||||+.|...+.. +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 45778899999999999999765443 2689999865522 223456789999999999999999998877 7789
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC----CCeEEee
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD----LNPKLGD 503 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~----~~~kL~D 503 (662)
++++||.+. +|..+++-++..+...++-.....|++||+.|+.|||+ +-|+||||||.|||+..+ |++||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~---NWvlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHS---NWVLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhh---hheeeccCCcceEEEeccCCccCeeEeec
Confidence 999999965 88888887766666789999999999999999999999 789999999999999888 8999999
Q ss_pred ccccccccCCCCC--cceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchh------hHHHHH
Q 040242 504 FGLARAYDHNINP--QTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAM------ELVLVD 574 (662)
Q Consensus 504 fGla~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~------~~~l~~ 574 (662)
+|+++.+.....+ ....++-|..|.|||.+.+. .+|++.|||+.|||+.||+|-++-|.+.+... +..-.+
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 9999999876544 33456789999999988765 58999999999999999999988886543211 111112
Q ss_pred HHHHHhhcCccccccCCCC---------------CCCCH-----------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 575 WVRELHSQGQITRAIDPTL---------------DYFDP-----------QEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 575 ~~~~~~~~~~~~~~id~~l---------------~~~~~-----------~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.+.+.+... .+..=|.+ ..++. .......+|..++|..||.+|-|+++.+++
T Consensus 260 rIf~vLG~P--t~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh 337 (438)
T KOG0666|consen 260 RIFEVLGTP--TDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH 337 (438)
T ss_pred HHHHHcCCC--ccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence 222211100 00000000 00000 011226778889999999999999999986
Q ss_pred H-hcCCCCCCCCCCCCCCCCC
Q 040242 629 L-LRDASLPQAPLDIHHEFPR 648 (662)
Q Consensus 629 L-~~~~~~p~~p~~~~~~~~~ 648 (662)
. =.+.++|+.|.++...+..
T Consensus 338 ~yF~~d~lpp~pt~~~vnf~~ 358 (438)
T KOG0666|consen 338 PYFTEDPLPPLPTSDNVNFEG 358 (438)
T ss_pred cccccCCCCCCcccceeeccc
Confidence 5 3456677666665543333
No 364
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.5e-32 Score=292.80 Aligned_cols=262 Identities=25% Similarity=0.373 Sum_probs=199.3
Q ss_pred HhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccC----
Q 040242 352 SATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD---- 425 (662)
Q Consensus 352 ~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~---- 425 (662)
...++|+..+.||+|++|.||++....++..||||++... .......+.+|+.++++++|+||+++++++....
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07880 12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDR 91 (343)
T ss_pred ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccc
Confidence 3467899999999999999999999889999999998543 2333456889999999999999999999887554
Q ss_pred --eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEee
Q 040242 426 --ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGD 503 (662)
Q Consensus 426 --~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~D 503 (662)
..++||||+ +++|.+++.. ..+++..++.++.|+++||.|||+ .+|+||||||+||+++.++.+||+|
T Consensus 92 ~~~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~kl~d 161 (343)
T cd07880 92 FHDFYLVMPFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCELKILD 161 (343)
T ss_pred cceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEee
Confidence 458999999 7899888742 358899999999999999999999 8999999999999999999999999
Q ss_pred ccccccccCCCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH-H--------H
Q 040242 504 FGLARAYDHNINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV-L--------V 573 (662)
Q Consensus 504 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l--------~ 573 (662)
||++...... .....+++.|+|||.+.+ ..++.++||||+||++++|++|+.||.......... . .
T Consensus 162 fg~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 162 FGLARQTDSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred cccccccccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 9999865432 223457889999998865 458899999999999999999999997543221100 0 0
Q ss_pred HHHHHHhhcC------ccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 574 DWVRELHSQG------QITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 574 ~~~~~~~~~~------~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
+|........ .+.......+..........+.+++.+|++.||++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0100000000 00000000011111223445789999999999999999999995
No 365
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-33 Score=315.51 Aligned_cols=261 Identities=25% Similarity=0.409 Sum_probs=208.8
Q ss_pred cCCcccceeeeeCceEEEEEEeCC-------CCcEEEEEEeeccc-hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccC
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPS-------TGLEVAIKRVAHNS-RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQD 425 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~-------~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~ 425 (662)
++....+.||+|.||.|++|.... ....||||.++... ....+.+..|+++++.+ +|+||+.++|+|..++
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 444556699999999999998631 14579999997653 35567899999999998 6999999999999999
Q ss_pred eeeEEEeccCCCCcchhccccc---------cccc--ccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeC
Q 040242 426 ELLLVYDYVPNGSLDKLLFDND---------QQKK--KILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLID 494 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~---------~~~~--~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~ 494 (662)
..++|+||++.|+|.++|+..+ .... ..|+..+.+.++.|||.|++||++ .+++||||.++|||+.
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARNVLIT 452 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhhEEec
Confidence 9999999999999999998765 1111 249999999999999999999999 8999999999999999
Q ss_pred CCCCeEEeeccccccccCCCCCcceecc--cCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHH
Q 040242 495 ADLNPKLGDFGLARAYDHNINPQTTHIV--GTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELV 571 (662)
Q Consensus 495 ~~~~~kL~DfGla~~~~~~~~~~~~~~~--gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~ 571 (662)
++..+||+|||+++...+.......... -+..|||||.+....++.|+||||||++||||++ |..||.+-... ..
T Consensus 453 ~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~--~~ 530 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT--EE 530 (609)
T ss_pred CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH--HH
Confidence 9999999999999965443322212122 2567999999999999999999999999999999 88888752211 12
Q ss_pred HHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 572 LVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 572 l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
+.+++++ |.. ...+..+..++..+++.||+.+|++||++.++++.|+.+
T Consensus 531 l~~~l~~----G~r--------~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 531 LLEFLKE----GNR--------MEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred HHHHHhc----CCC--------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 2233332 211 122334567788999999999999999999999999884
No 366
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.8e-33 Score=314.98 Aligned_cols=255 Identities=26% Similarity=0.423 Sum_probs=194.0
Q ss_pred HhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeeeEec-------
Q 040242 352 SATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRK------- 423 (662)
Q Consensus 352 ~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~------- 423 (662)
+-..+|++.++||+||||.|||++.+-+|+.+|||++... +........+|+..+++|+|||||+++..+.+
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 3446799999999999999999999999999999999765 44456678999999999999999998843210
Q ss_pred --------------------------------------------------------------------------------
Q 040242 424 -------------------------------------------------------------------------------- 423 (662)
Q Consensus 424 -------------------------------------------------------------------------------- 423 (662)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------c--------CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHH
Q 040242 424 ------------------------Q--------DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALL 471 (662)
Q Consensus 424 ------------------------~--------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~ 471 (662)
+ ..+|+-||||+...|++++.++.... .-...|+++.+|++||.
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~----~~d~~wrLFreIlEGLa 711 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS----QRDEAWRLFREILEGLA 711 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch----hhHHHHHHHHHHHHHHH
Confidence 0 12478899999888888886543210 34667899999999999
Q ss_pred HhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc---C--------------CCCCcceecccCCcccCccccc
Q 040242 472 YLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD---H--------------NINPQTTHIVGTLGYLAPELTR 534 (662)
Q Consensus 472 yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~---~--------------~~~~~~~~~~gt~~y~aPE~~~ 534 (662)
|+|+ .+||||||||.||+|+++..+||+|||++.... . ......+..+||.-|+|||.+.
T Consensus 712 YIH~---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~ 788 (1351)
T KOG1035|consen 712 YIHD---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS 788 (1351)
T ss_pred HHHh---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence 9999 899999999999999999999999999998721 0 0112345578999999999986
Q ss_pred CC---CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHc
Q 040242 535 TG---KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLC 611 (662)
Q Consensus 535 ~~---~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~C 611 (662)
+. .++.|.|+||+|+||+||+. ||....+... +-..++.+.+... .++...+...-.++++++
T Consensus 789 ~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~------iL~~LR~g~iP~~-----~~f~~~~~~~e~slI~~L 854 (1351)
T KOG1035|consen 789 DTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERAS------ILTNLRKGSIPEP-----ADFFDPEHPEEASLIRWL 854 (1351)
T ss_pred ccccccccchhhhHHHHHHHHHHhc---cCCchHHHHH------HHHhcccCCCCCC-----cccccccchHHHHHHHHH
Confidence 54 49999999999999999985 4553322110 1111122222111 222344455567889999
Q ss_pred cCCCCCCCCCHHHHHH
Q 040242 612 CDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 612 l~~dP~~RPt~~eVl~ 627 (662)
++.||.+|||+.|+++
T Consensus 855 l~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 855 LSHDPSKRPTATELLN 870 (1351)
T ss_pred hcCCCccCCCHHHHhh
Confidence 9999999999999874
No 367
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-33 Score=302.48 Aligned_cols=257 Identities=30% Similarity=0.399 Sum_probs=198.2
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhccccccceeeeeeEeccC------eeeE
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQD------ELLL 429 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~------~~~l 429 (662)
+...+.||+|+||.||+|+.+.+|+.||||.+.... ....+....|++++++++|+|||++++.-+... ...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 344678999999999999999999999999987643 334556789999999999999999999865543 6799
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeC--CCC--CeEEeecc
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLID--ADL--NPKLGDFG 505 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~--~~~--~~kL~DfG 505 (662)
|||||++|+|+..|.+.+. ...|+..+.+.++.++..||.|||+ ++|+||||||.||++- +++ .-||+|||
T Consensus 95 vmEyC~gGsL~~~L~~PEN--~~GLpE~e~l~lL~d~~~al~~LrE---n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPEN--AYGLPESEFLDLLSDLVSALRHLRE---NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred EEeecCCCcHHHHhcCccc--ccCCCHHHHHHHHHHHHHHHHHHHH---cCceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 9999999999999977654 5679999999999999999999998 8999999999999983 333 38999999
Q ss_pred ccccccCCCCCcceecccCCcccCccccc-CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhc--
Q 040242 506 LARAYDHNINPQTTHIVGTLGYLAPELTR-TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQ-- 582 (662)
Q Consensus 506 la~~~~~~~~~~~~~~~gt~~y~aPE~~~-~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~-- 582 (662)
.|+-.+.+. .....+||..|++||... .+.++...|.|||||++||.+||..||..........-..|.-..-..
T Consensus 170 ~Arel~d~s--~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 170 AARELDDNS--LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG 247 (732)
T ss_pred ccccCCCCC--eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence 999877653 556689999999999998 488999999999999999999999999865443211111221110000
Q ss_pred ----------Cccccc-cCCCCCCCCHHHHHHHHHHHHHccCCCCCCCC
Q 040242 583 ----------GQITRA-IDPTLDYFDPQEAELVLTLGLLCCDPHPDFRP 620 (662)
Q Consensus 583 ----------~~~~~~-id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP 620 (662)
|.+... .-|.-..........+.+....+|..+|++|-
T Consensus 248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~ 296 (732)
T KOG4250|consen 248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG 296 (732)
T ss_pred eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence 000000 00111223345566677777778888888887
No 368
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=2.7e-33 Score=298.59 Aligned_cols=262 Identities=23% Similarity=0.350 Sum_probs=200.1
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCe----
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDE---- 426 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~---- 426 (662)
..++|+..+.||+|++|.||+|....++..||||++... .....+.+.+|+.++++++|+|++++++++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 457899999999999999999999888999999998653 23344667889999999999999999998766554
Q ss_pred --eeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 427 --LLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 427 --~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
.++|+||+ +++|.+++.. ..+++..+..++.|+++||.|||+ .+++||||||+||+++.++.+||+||
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~~kL~df 162 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCELKILDF 162 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEccc
Confidence 89999999 6799988843 358999999999999999999999 89999999999999999999999999
Q ss_pred cccccccCCCCCcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHH-HHH--------
Q 040242 505 GLARAYDHNINPQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELV-LVD-------- 574 (662)
Q Consensus 505 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~-l~~-------- 574 (662)
|++...... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.......... +.+
T Consensus 163 g~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~ 238 (343)
T cd07851 163 GLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEE 238 (343)
T ss_pred ccccccccc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHH
Confidence 999865432 223467889999998765 367889999999999999999999997544321111 000
Q ss_pred HHHHHhhc--CccccccC----CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 575 WVRELHSQ--GQITRAID----PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 575 ~~~~~~~~--~~~~~~id----~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+....... ......+. +............+.+++.+||+.+|++|||+.+|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 239 LLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred HHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 00000000 00000000 00000111235678899999999999999999999874
No 369
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.4e-33 Score=295.25 Aligned_cols=250 Identities=24% Similarity=0.321 Sum_probs=206.4
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
...|.+...||+|.|+.|.+|++..++..||||.+.+.. ......+.+|+.+|..|+|||||+++.+.+....+|+||
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~ 134 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVM 134 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEE
Confidence 456888999999999999999999999999999997753 333455899999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||+.+|.+.++|..+. .+.......++.|+.+|++|||+ +.|+|||||++||||+.+.++||+|||++..+.
T Consensus 135 eya~~ge~~~yl~~~g-----r~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~ 206 (596)
T KOG0586|consen 135 EYASGGELFDYLVKHG-----RMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFSTFFD 206 (596)
T ss_pred EeccCchhHHHHHhcc-----cchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccceeec
Confidence 9999999999997653 34457778899999999999999 899999999999999999999999999999887
Q ss_pred CCCCCcceecccCCcccCcccccCCC-CCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGK-ATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~-~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
.. ......+|++.|.|||++.+.+ ..+++|+||+|++||-|++|..||++..-.+- ++ .++-
T Consensus 207 ~~--~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L-----------r~----rvl~ 269 (596)
T KOG0586|consen 207 YG--LMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL-----------RP----RVLR 269 (596)
T ss_pred cc--ccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc-----------cc----hhee
Confidence 43 3445578999999999998765 47899999999999999999999986532100 00 0111
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
..+ ..+.-....+.+++++++-.+|.+|+++.++.+.-
T Consensus 270 gk~-rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~ 307 (596)
T KOG0586|consen 270 GKY-RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDR 307 (596)
T ss_pred eee-cccceeechhHHHHHHhhccCccccCCHHHhhhhc
Confidence 111 11222334466788889999999999999999854
No 370
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-34 Score=324.64 Aligned_cols=255 Identities=27% Similarity=0.425 Sum_probs=204.4
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
-+-+++....||.|.||.||-|....+|...|||.+... .....+...+|+.++..|+|||+|+++|.-.+.++.+|.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 345677788999999999999999999999999987654 334456778999999999999999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
||||++|+|.+.+...+ .+++........|++.|+.|||+ .+||||||||.||+|+.+|.+|++|||.|...
T Consensus 1313 MEyC~~GsLa~ll~~gr-----i~dE~vt~vyt~qll~gla~LH~---~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki 1384 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGR-----IEDEMVTRVYTKQLLEGLAYLHE---HGIVHRDIKPANILLDFNGLIKYGDFGSAVKI 1384 (1509)
T ss_pred HHHhccCcHHHHHHhcc-----hhhhhHHHHHHHHHHHHHHHHHh---cCceecCCCccceeeecCCcEEeecccceeEe
Confidence 99999999999995442 24444455678899999999999 89999999999999999999999999999987
Q ss_pred cCCCC---CcceecccCCcccCcccccCC---CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCc
Q 040242 511 DHNIN---PQTTHIVGTLGYLAPELTRTG---KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQ 584 (662)
Q Consensus 511 ~~~~~---~~~~~~~gt~~y~aPE~~~~~---~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 584 (662)
..... .......||+.|||||++.+. ....++||||+|||++||+||++||...+.. |.-..+-
T Consensus 1385 ~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne-------~aIMy~V--- 1454 (1509)
T KOG4645|consen 1385 KNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNE-------WAIMYHV--- 1454 (1509)
T ss_pred cCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccch-------hHHHhHH---
Confidence 65531 122346799999999998653 3566899999999999999999999765442 3211111
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 585 ITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 585 ~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
.-.....++......-.+++..||+.||.+|.++.|++++=
T Consensus 1455 ----~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~ 1495 (1509)
T KOG4645|consen 1455 ----AAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHA 1495 (1509)
T ss_pred ----hccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhh
Confidence 01111223334556667888999999999999999888753
No 371
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=1.3e-32 Score=278.94 Aligned_cols=237 Identities=27% Similarity=0.365 Sum_probs=195.1
Q ss_pred eeeeCceEEEEEEeCCCCcEEEEEEeeccch---hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCc
Q 040242 363 VGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR---QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSL 439 (662)
Q Consensus 363 LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL 439 (662)
||+|++|.||++....+++.+++|.+..... .....+..|+.++++++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 6899999999999988899999999876532 2456789999999999999999999999999999999999999999
Q ss_pred chhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcce
Q 040242 440 DKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQTT 519 (662)
Q Consensus 440 ~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~~ 519 (662)
.+++... ..+++.....++.|+++||.|||+ .+++|+||+|+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~ 151 (250)
T cd05123 81 FSHLSKE-----GRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTN 151 (250)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCC-Cccc
Confidence 9998543 358999999999999999999999 899999999999999999999999999998764432 1233
Q ss_pred ecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHH
Q 040242 520 HIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQ 599 (662)
Q Consensus 520 ~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 599 (662)
...++..|++||...+...+.++|+||||+++|||++|+.||...... .+...+ .. ..+ ..+..
T Consensus 152 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~---~~~~~~---~~---------~~~-~~~~~ 215 (250)
T cd05123 152 TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRK---EIYEKI---LK---------DPL-RFPEF 215 (250)
T ss_pred CCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH---HHHHHH---hc---------CCC-CCCCC
Confidence 456788999999998888899999999999999999999999754321 111111 10 011 11222
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHH
Q 040242 600 EAELVLTLGLLCCDPHPDFRPSTRR 624 (662)
Q Consensus 600 ~~~~l~~l~~~Cl~~dP~~RPt~~e 624 (662)
....+.+++.+||..||++||++.+
T Consensus 216 ~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 216 LSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCHHHHHHHHHHhcCCHhhCCCccc
Confidence 3566788999999999999999954
No 372
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=3.7e-33 Score=273.82 Aligned_cols=248 Identities=27% Similarity=0.355 Sum_probs=200.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|...++||+|.||+|-+++-+.+++.+|+|+++++ .+.....-+.|-++|+..+||.+..|.-.+...+.+|+||
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM 247 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM 247 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence 5788899999999999999999999999999999876 3444556678899999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
||..||.|.-+|.+ ...++.....-.-..|..||.|||+ .+||.||||.+|+|||.+|.+||+||||++---
T Consensus 248 eyanGGeLf~HLsr-----er~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 248 EYANGGELFFHLSR-----ERVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEccCceEeeehhh-----hhcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchhcc
Confidence 99999999999954 3457777777778899999999999 899999999999999999999999999998422
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
. ....+...+||+.|+|||++....+....|.|.+||++|||+||+.||...+...-..+ +. .. |
T Consensus 320 ~-~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeL---Il--~e--------d- 384 (516)
T KOG0690|consen 320 K-YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFEL---IL--ME--------D- 384 (516)
T ss_pred c-ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHH---HH--hh--------h-
Confidence 1 22344567999999999999999999999999999999999999999986643211111 10 00 0
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCC-----CHHHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRP-----STRRVVQ 627 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP-----t~~eVl~ 627 (662)
-.++.....+...|..-.|..||.+|. .+.||.+
T Consensus 385 --~kFPr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~ 423 (516)
T KOG0690|consen 385 --LKFPRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMR 423 (516)
T ss_pred --ccCCccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHh
Confidence 012223333445566678899999996 3666664
No 373
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=1.3e-32 Score=269.62 Aligned_cols=264 Identities=22% Similarity=0.328 Sum_probs=207.1
Q ss_pred cchHHHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccc-cccceeeeeeEec
Q 040242 345 FRYSELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLR-HRNLVQLHGWCRK 423 (662)
Q Consensus 345 ~~~~el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~ 423 (662)
-++.|+++-| .+.||+|+|+.|--++...+|.++|||++.+.......+..+|++++.+.+ |+||++|++|+++
T Consensus 73 g~F~d~YkLt-----~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 73 GKFEDMYKLT-----SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred chHHHHHHhH-----HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 3577888887 478999999999999999999999999999988788889999999999985 9999999999999
Q ss_pred cCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCC---eE
Q 040242 424 QDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLN---PK 500 (662)
Q Consensus 424 ~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~k 500 (662)
+...|||||-|.||+|..+|.+ +.-+++.+..++.++||.||.+||. ++|.||||||+|||-..... +|
T Consensus 148 d~~FYLVfEKm~GGplLshI~~-----~~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~vsPvK 219 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQK-----RKHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNKVSPVK 219 (463)
T ss_pred cceEEEEEecccCchHHHHHHH-----hhhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCCcCcee
Confidence 9999999999999999999854 4568889999999999999999999 99999999999999865543 89
Q ss_pred EeeccccccccC--CC----CCcceecccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcCCCCCCcccchh-
Q 040242 501 LGDFGLARAYDH--NI----NPQTTHIVGTLGYLAPELTR-----TGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAM- 568 (662)
Q Consensus 501 L~DfGla~~~~~--~~----~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~- 568 (662)
||||.|..-... +. .+.....+|+..|||||+.. ...|..++|.||+|||||-|++|.+||.+.-..+
T Consensus 220 iCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC 299 (463)
T KOG0607|consen 220 ICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC 299 (463)
T ss_pred eeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC
Confidence 999988764322 21 22334467899999999763 2357889999999999999999999997542210
Q ss_pred ----hHHHHHHHHHHhhcCccccccCCCCCCCCH----HHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 569 ----ELVLVDWVRELHSQGQITRAIDPTLDYFDP----QEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 569 ----~~~l~~~~~~~~~~~~~~~~id~~l~~~~~----~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
...-..... ++.+.|-...-+++. ....+..+++...+..++.+|-++.++++
T Consensus 300 GWdrGe~Cr~CQ~------~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 300 GWDRGEVCRVCQN------KLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred CccCCCccHHHHH------HHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 000001111 112222222222332 23455677888888999999999999886
No 374
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.98 E-value=4.1e-34 Score=274.16 Aligned_cols=253 Identities=26% Similarity=0.363 Sum_probs=199.3
Q ss_pred ccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHHhhc-cccccceeeeeeEeccCeeeEEEeccCC
Q 040242 359 EKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITSMGR-LRHRNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 359 ~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~l~~-l~H~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
....||.|.||+|+|-.++..|+..|||+++... ....++++.|.....+ -++||||+++|.+..++..++.||.| .
T Consensus 68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM-d 146 (361)
T KOG1006|consen 68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM-D 146 (361)
T ss_pred HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH-h
Confidence 3567999999999999999999999999998764 3566788889876555 47999999999999999999999999 6
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
-||+.+-..-..-+...+++.-.=.|......||.||.++ ..|||||+||+||||+..|.+||||||++..+....
T Consensus 147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~Si-- 222 (361)
T KOG1006|consen 147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSI-- 222 (361)
T ss_pred hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHhHHHHH--
Confidence 6877765433223356688887788888899999999986 899999999999999999999999999998665432
Q ss_pred cceecccCCcccCcccccCC--CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTG--KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~--~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
..+.-+|-..|||||.+... .+.-+|||||+|++|+|+.||+.|+..-... .+-+.+ .-.-||.+-
T Consensus 223 AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv-----feql~~-------Vv~gdpp~l 290 (361)
T KOG1006|consen 223 AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV-----FEQLCQ-------VVIGDPPIL 290 (361)
T ss_pred HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH-----HHHHHH-------HHcCCCCee
Confidence 22334688899999988543 3788999999999999999999999854321 111111 112233332
Q ss_pred CCC---HHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 595 YFD---PQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 595 ~~~---~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
..+ .+....+..++..|+..|.+.||...++.++
T Consensus 291 ~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 291 LFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred cCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 222 3356778899999999999999999998763
No 375
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=2e-31 Score=306.77 Aligned_cols=146 Identities=29% Similarity=0.430 Sum_probs=132.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
++|.+.++||+|+||+||+|.+..+++.||||++.... ......+..|+.++..++|+||+++++++......++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 57888999999999999999998889999999986542 333467889999999999999999999999999999999
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLAR 508 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~ 508 (662)
||+++++|.+++... ..+++...+.++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 84 Ey~~g~~L~~li~~~-----~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 84 EYLIGGDVKSLLHIY-----GYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred eCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999998532 357888899999999999999999 899999999999999999999999999886
No 376
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=1.1e-31 Score=270.94 Aligned_cols=220 Identities=20% Similarity=0.195 Sum_probs=178.2
Q ss_pred eCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCcchhccc
Q 040242 366 GGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFD 445 (662)
Q Consensus 366 G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 445 (662)
|.+|.||++.++.+++.+|+|++.... .+..|...+....||||+++++++...+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 789999999999999999999996643 233455555566799999999999999999999999999999999853
Q ss_pred ccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcceecccCC
Q 040242 446 NDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQTTHIVGTL 525 (662)
Q Consensus 446 ~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~ 525 (662)
. ..+++.....++.|+++||.|||+ .+++||||||+||+++.++.++++|||++....... ....++.
T Consensus 79 ~-----~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~----~~~~~~~ 146 (237)
T cd05576 79 F-----LNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC----DGEAVEN 146 (237)
T ss_pred h-----cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhcccccc----ccCCcCc
Confidence 2 358999999999999999999999 899999999999999999999999999887654321 2234567
Q ss_pred cccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 040242 526 GYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVL 605 (662)
Q Consensus 526 ~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~ 605 (662)
.|+|||......++.++||||+|+++|||++|+.|+....... ..... ...+......+.
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-----------------~~~~~---~~~~~~~~~~~~ 206 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-----------------NTHTT---LNIPEWVSEEAR 206 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-----------------ccccc---cCCcccCCHHHH
Confidence 8999999988888999999999999999999998865321100 00000 011223345678
Q ss_pred HHHHHccCCCCCCCCCH
Q 040242 606 TLGLLCCDPHPDFRPST 622 (662)
Q Consensus 606 ~l~~~Cl~~dP~~RPt~ 622 (662)
.++.+|++.||++||++
T Consensus 207 ~li~~~l~~dp~~R~~~ 223 (237)
T cd05576 207 SLLQQLLQFNPTERLGA 223 (237)
T ss_pred HHHHHHccCCHHHhcCC
Confidence 89999999999999997
No 377
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=4.4e-31 Score=264.94 Aligned_cols=239 Identities=31% Similarity=0.420 Sum_probs=195.7
Q ss_pred CceEEEEEEeCCCCcEEEEEEeeccchhh-HHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCcchhccc
Q 040242 367 GFGKVYRGVIPSTGLEVAIKRVAHNSRQG-MKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFD 445 (662)
Q Consensus 367 ~~g~Vy~~~~~~~g~~vavK~~~~~~~~~-~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~ 445 (662)
+||.||+|+...+++.+++|++....... .+.+.+|++.+++++|+|++++++++......+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999998889999999997765544 68899999999999999999999999999999999999999999999854
Q ss_pred ccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcceecccCC
Q 040242 446 NDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQTTHIVGTL 525 (662)
Q Consensus 446 ~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~ 525 (662)
.. .+++..++.++.++++++.|||+ .+++|+||+|+||+++.++.++|+|||.+....... ......++.
T Consensus 81 ~~-----~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~ 150 (244)
T smart00220 81 RG-----RLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTP 150 (244)
T ss_pred cc-----CCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCc
Confidence 32 28899999999999999999999 899999999999999999999999999998765432 233456788
Q ss_pred cccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 040242 526 GYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVL 605 (662)
Q Consensus 526 ~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~ 605 (662)
.|++||.......+.++|||+||+++++|++|..|+...... ....++.. .+. .............+.
T Consensus 151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~--~~~~~~~~----~~~------~~~~~~~~~~~~~~~ 218 (244)
T smart00220 151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQL--LELFKKIG----KPK------PPFPPPEWKISPEAK 218 (244)
T ss_pred CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHh----ccC------CCCccccccCCHHHH
Confidence 999999998888899999999999999999999998753221 11111111 100 000011111446788
Q ss_pred HHHHHccCCCCCCCCCHHHHHH
Q 040242 606 TLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 606 ~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
+++.+|+..+|++||++.++++
T Consensus 219 ~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 219 DLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHccCCchhccCHHHHhh
Confidence 8999999999999999999987
No 378
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=2.8e-32 Score=265.57 Aligned_cols=268 Identities=23% Similarity=0.297 Sum_probs=207.0
Q ss_pred hccCCccc-ceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcc-ccccceeeeeeEec----cCe
Q 040242 353 ATKGFREK-NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRK----QDE 426 (662)
Q Consensus 353 at~~f~~~-~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~----~~~ 426 (662)
.|++|++. ++||-|-.|.|-.+..+.+++++|+|++.... ...+|++..-.. .|||||++++.++. ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-----KARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH-----HHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 45566553 68999999999999999999999999985542 235677765554 69999999998854 346
Q ss_pred eeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCC---CCCeEEee
Q 040242 427 LLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDA---DLNPKLGD 503 (662)
Q Consensus 427 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~~~~kL~D 503 (662)
+++|||.|+||.|...+.+.. ...+++++.-.|++||+.|+.|||+ .+|.||||||+|+|... |-.+||+|
T Consensus 134 LLiVmE~meGGeLfsriq~~g---~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~lKLtD 207 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRG---DQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPLKLTD 207 (400)
T ss_pred eEeeeecccchHHHHHHHHcc---cccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcceEecc
Confidence 899999999999999997654 5678999999999999999999999 89999999999999965 45599999
Q ss_pred ccccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcC
Q 040242 504 FGLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQG 583 (662)
Q Consensus 504 fGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~ 583 (662)
||+|+..... ......+-|+.|.|||++...++...+|+||+||++|-|+||.+||....... +.-=++.....|
T Consensus 208 fGFAK~t~~~--~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a---ispgMk~rI~~g 282 (400)
T KOG0604|consen 208 FGFAKETQEP--GDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA---ISPGMKRRIRTG 282 (400)
T ss_pred cccccccCCC--ccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc---CChhHHhHhhcc
Confidence 9999976543 23334577999999999999999999999999999999999999997443210 000011111111
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH--HhcCCCCCCCCCC
Q 040242 584 QITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF--LLRDASLPQAPLD 641 (662)
Q Consensus 584 ~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~--L~~~~~~p~~p~~ 641 (662)
. .--| ...-.+..+...++++..|..+|.+|.|+.+++.+ +.+..-+|.-|+.
T Consensus 283 q---y~FP--~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tpl~ 337 (400)
T KOG0604|consen 283 Q---YEFP--EPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTPLS 337 (400)
T ss_pred C---ccCC--ChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCCch
Confidence 0 0000 11123456778899999999999999999999985 5667777777776
No 379
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=269.11 Aligned_cols=266 Identities=23% Similarity=0.302 Sum_probs=210.1
Q ss_pred hHHHHHhccCCcccceeeeeCceEEEEEEeCCCC-----cEEEEEEeecc-chhhHHHHHHHHHHhhccccccceeeeee
Q 040242 347 YSELYSATKGFREKNLVGSGGFGKVYRGVIPSTG-----LEVAIKRVAHN-SRQGMKEFVAEITSMGRLRHRNLVQLHGW 420 (662)
Q Consensus 347 ~~el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g-----~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l~H~niv~l~~~ 420 (662)
..||.....+++...++.+|.||.||+|.+.+.. +.|-||.++.. +.-+...++.|...+..+.|||+.++.+.
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 4456556677888889999999999999875433 34667766544 34456678999999999999999999999
Q ss_pred Eecc-CeeeEEEeccCCCCcchhcccccc---cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC
Q 040242 421 CRKQ-DELLLVYDYVPNGSLDKLLFDNDQ---QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD 496 (662)
Q Consensus 421 ~~~~-~~~~lV~E~~~~gsL~~~l~~~~~---~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~ 496 (662)
+.+. ...+++|.++.-|+|..+|...+. .....++-.+...++.|++.|+.|||. .++||.||..+|+++|+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhh
Confidence 8765 468999999999999999973321 123567778899999999999999999 899999999999999999
Q ss_pred CCeEEeeccccccccC-CCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHH
Q 040242 497 LNPKLGDFGLARAYDH-NINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVD 574 (662)
Q Consensus 497 ~~~kL~DfGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~ 574 (662)
.++||+|=.++|.+-. +...-...-..+..||+||.+....++.++|||||||+||||+| |+.|+..-++.+.. .
T Consensus 433 LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~---~ 509 (563)
T KOG1024|consen 433 LQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME---H 509 (563)
T ss_pred eeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH---H
Confidence 9999999999985432 22222222345689999999999999999999999999999998 99998766554322 2
Q ss_pred HHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 575 WVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 575 ~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
++.. |. ++ ..+..+++++..++..||...|++||+++|++.-|.
T Consensus 510 ylkd----Gy-------Rl-aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLs 553 (563)
T KOG1024|consen 510 YLKD----GY-------RL-AQPFNCPDELFTVMACCWALLPEERPSFSQLVICLS 553 (563)
T ss_pred HHhc----cc-------ee-cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHH
Confidence 2221 11 11 224467889999999999999999999999998775
No 380
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=6.6e-31 Score=295.54 Aligned_cols=266 Identities=20% Similarity=0.237 Sum_probs=173.7
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCC----CcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeee------Ee
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPST----GLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGW------CR 422 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~----g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~------~~ 422 (662)
..++|+..++||+|+||.||+|++..+ +..||||++...... +....| .+.+..+.++..++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 567899999999999999999999888 899999988643221 111111 1122222222222111 34
Q ss_pred ccCeeeEEEeccCCCCcchhccccccc---------------ccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcC
Q 040242 423 KQDELLLVYDYVPNGSLDKLLFDNDQQ---------------KKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVK 487 (662)
Q Consensus 423 ~~~~~~lV~E~~~~gsL~~~l~~~~~~---------------~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlk 487 (662)
.....++||||+++++|.+++...... .........+..++.|+++||.|||+ .+|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCC
Confidence 566899999999999999998643210 00111233456799999999999999 899999999
Q ss_pred CCceEeCC-CCCeEEeeccccccccCCCCCcceecccCCcccCcccccCC----------------------CCCcchhH
Q 040242 488 PSNVLIDA-DLNPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRTG----------------------KATTSTDV 544 (662)
Q Consensus 488 p~NIll~~-~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~----------------------~~t~ksDV 544 (662)
|+|||++. ++.+||+|||+++..............+++.|+|||.+... .++.++||
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DV 362 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDI 362 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCccc
Confidence 99999986 57899999999987654444444456789999999965321 23456799
Q ss_pred HHHHHHHHHHHcCCCCCCcccchh-------hHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCC
Q 040242 545 FGFGTLMLEVACGRRPIEPQRTAM-------ELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPD 617 (662)
Q Consensus 545 ~S~Gvvl~elltG~~p~~~~~~~~-------~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~ 617 (662)
|||||+||||+++..+........ ...+..|....... ....+..... ..........+|+.+||+.||+
T Consensus 363 wSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~d~~~~~~~dLi~~mL~~dP~ 439 (566)
T PLN03225 363 YSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR--ASPDLRRGFE-VLDLDGGAGWELLKSMMRFKGR 439 (566)
T ss_pred HHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc--cchhhhhhhh-hccccchHHHHHHHHHccCCcc
Confidence 999999999999776654221100 00111221111000 0000000000 0001122345799999999999
Q ss_pred CCCCHHHHHHH
Q 040242 618 FRPSTRRVVQF 628 (662)
Q Consensus 618 ~RPt~~eVl~~ 628 (662)
+|||+.|++++
T Consensus 440 kR~ta~e~L~H 450 (566)
T PLN03225 440 QRISAKAALAH 450 (566)
T ss_pred cCCCHHHHhCC
Confidence 99999999985
No 381
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.8e-32 Score=273.43 Aligned_cols=263 Identities=22% Similarity=0.315 Sum_probs=209.2
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccc-c-c----cceeeeeeEeccCee
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLR-H-R----NLVQLHGWCRKQDEL 427 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-H-~----niv~l~~~~~~~~~~ 427 (662)
+++|.+...+|+|.||.|-.+.+...+..||||+++...+ -.+.-+-|++++.++. + | -+|++.+|+...++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k-YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK-YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH-HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 6889999999999999999999988899999999865433 2344578999999993 2 2 278899999999999
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCC------------
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDA------------ 495 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~------------ 495 (662)
++|+|.+ |-|+.++|..+. ..+++..++..++.|+++++++||+ .+++|.||||+|||+.+
T Consensus 167 Civfell-G~S~~dFlk~N~---y~~fpi~~ir~m~~QL~~sv~fLh~---~kl~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENN---YIPFPIDHIRHMGYQLLESVAFLHD---LKLTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred EEEEecc-ChhHHHHhccCC---ccccchHHHHHHHHHHHHHHHHHHh---cceeecCCChheEEEeccceEEEeccCCc
Confidence 9999999 789999997664 5678999999999999999999999 89999999999999831
Q ss_pred --------CCCeEEeeccccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccch
Q 040242 496 --------DLNPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTA 567 (662)
Q Consensus 496 --------~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~ 567 (662)
+..+||.|||.|+.-... ....+.|..|.|||++.+-.++.++||||+||||.|+.+|...|...+..
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~e~----hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~ 315 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDHEH----HSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENL 315 (415)
T ss_pred cceeccCCCcceEEEecCCcceeccC----cceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcH
Confidence 345899999999864432 24567899999999999999999999999999999999999999876655
Q ss_pred hhHHHHHHHHHHh--------------hcCccc-----------cccCCC--C---CCCCHHHHHHHHHHHHHccCCCCC
Q 040242 568 MELVLVDWVRELH--------------SQGQIT-----------RAIDPT--L---DYFDPQEAELVLTLGLLCCDPHPD 617 (662)
Q Consensus 568 ~~~~l~~~~~~~~--------------~~~~~~-----------~~id~~--l---~~~~~~~~~~l~~l~~~Cl~~dP~ 617 (662)
+...+.+.+-+.. ..+++. ...++. + ......+...|.+|+++||..||.
T Consensus 316 EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~ 395 (415)
T KOG0671|consen 316 EHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPA 395 (415)
T ss_pred HHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcc
Confidence 5444333322111 111110 111111 1 112345667799999999999999
Q ss_pred CCCCHHHHHHH
Q 040242 618 FRPSTRRVVQF 628 (662)
Q Consensus 618 ~RPt~~eVl~~ 628 (662)
+|+|++|++++
T Consensus 396 ~RiTl~EAL~H 406 (415)
T KOG0671|consen 396 RRITLREALSH 406 (415)
T ss_pred ccccHHHHhcC
Confidence 99999999974
No 382
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=1e-31 Score=243.53 Aligned_cols=264 Identities=25% Similarity=0.342 Sum_probs=198.9
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
+|...++||+|.||+||||+...+++.||+|+++.+. +......++|+.+++.++|+|||++++....++.+-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 3556788999999999999999999999999987653 33345678999999999999999999999999999999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCC
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~ 513 (662)
| .-+|..+...- ...++......++.|+++||.++|+ .++.||||||+|++++.+|+.|++|||+++.++-.
T Consensus 83 c-dqdlkkyfdsl----ng~~d~~~~rsfmlqllrgl~fchs---hnvlhrdlkpqnllin~ngelkladfglarafgip 154 (292)
T KOG0662|consen 83 C-DQDLKKYFDSL----NGDLDPEIVRSFMLQLLRGLGFCHS---HNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154 (292)
T ss_pred h-hHHHHHHHHhc----CCcCCHHHHHHHHHHHHhhhhhhhh---hhhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence 9 55777776433 4668888899999999999999999 89999999999999999999999999999988765
Q ss_pred CCCcceecccCCcccCcccccCCC-CCcchhHHHHHHHHHHHHcCCCC-CCcccchhhHHHHHHHHHHhhcCc---cccc
Q 040242 514 INPQTTHIVGTLGYLAPELTRTGK-ATTSTDVFGFGTLMLEVACGRRP-IEPQRTAMELVLVDWVRELHSQGQ---ITRA 588 (662)
Q Consensus 514 ~~~~~~~~~gt~~y~aPE~~~~~~-~t~ksDV~S~Gvvl~elltG~~p-~~~~~~~~~~~l~~~~~~~~~~~~---~~~~ 588 (662)
.... ...+-|..|.+|.++.+.+ ++...|+||-||++.|+....+| |.+.+..++..-+-|+-....+.. +.+.
T Consensus 155 vrcy-saevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 155 VRCY-SAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred eEee-eceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccC
Confidence 4332 2335689999999887754 78889999999999999985444 555444444333333322222211 1122
Q ss_pred cCCCC-CCCCH---------HHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 589 IDPTL-DYFDP---------QEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 589 id~~l-~~~~~---------~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
-|-.. ..++. .....=.++..+.+.-+|.+|.++++.+++
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh 283 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH 283 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC
Confidence 22211 11211 111222455666777799999999888764
No 383
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=299.69 Aligned_cols=219 Identities=30% Similarity=0.355 Sum_probs=191.4
Q ss_pred ccCccccchHHHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccce
Q 040242 339 EYGACRFRYSELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLV 415 (662)
Q Consensus 339 ~~~~~~~~~~el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv 415 (662)
.+.+..-...++.-..++|.+.++||+|+||.|...+.+.+++.+|+|++.+.. .....-|..|-.+|..-+.+-|+
T Consensus 59 ~~kp~v~~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv 138 (1317)
T KOG0612|consen 59 RYKPIVKKVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIV 138 (1317)
T ss_pred HhHHHHHHHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHH
Confidence 334444456677777889999999999999999999999999999999997742 33445688899999999999999
Q ss_pred eeeeeEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCC
Q 040242 416 QLHGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDA 495 (662)
Q Consensus 416 ~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~ 495 (662)
+++-.|.+++++|+|||||+||+|-.+|... ..++.+-....+..|.-||..||+ .|+|||||||+|||||.
T Consensus 139 ~LhyAFQD~~~LYlVMdY~pGGDlltLlSk~-----~~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~ 210 (1317)
T KOG0612|consen 139 QLHYAFQDERYLYLVMDYMPGGDLLTLLSKF-----DRLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDK 210 (1317)
T ss_pred HHHHHhcCccceEEEEecccCchHHHHHhhc-----CCChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecc
Confidence 9999999999999999999999999999543 257777777888899999999999 89999999999999999
Q ss_pred CCCeEEeeccccccccCCCCCcceecccCCcccCccccc----C-CCCCcchhHHHHHHHHHHHHcCCCCCCccc
Q 040242 496 DLNPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTR----T-GKATTSTDVFGFGTLMLEVACGRRPIEPQR 565 (662)
Q Consensus 496 ~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~----~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~ 565 (662)
.|.+||+|||.+-.+..+..-.....+|||.|++||++. + +.|.+.+|.||+||++|||+.|..||....
T Consensus 211 ~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads 285 (1317)
T KOG0612|consen 211 SGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS 285 (1317)
T ss_pred cCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH
Confidence 999999999999888876655666679999999999884 2 578999999999999999999999998543
No 384
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=4.6e-32 Score=280.33 Aligned_cols=245 Identities=25% Similarity=0.351 Sum_probs=195.8
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCC
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG 437 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 437 (662)
.++||+|.||+||-|+.+.+|+.||||++.+. ......+..+|+.+|++++||.||.+--.|+..+..++|||-+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 57899999999999999999999999999664 3444578899999999999999999999999999999999999544
Q ss_pred CcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC---CCeEEeeccccccccCCC
Q 040242 438 SLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD---LNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 438 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kL~DfGla~~~~~~~ 514 (662)
-|+-+| ..+ +..|+...-..++.||+.||.|||. ++|+|+||||+||||... ..+||||||.|+.+++..
T Consensus 649 MLEMIL-SsE---kgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks 721 (888)
T KOG4236|consen 649 MLEMIL-SSE---KGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS 721 (888)
T ss_pred HHHHHH-Hhh---cccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeecchhh
Confidence 454444 332 5678888888899999999999999 999999999999999654 459999999999987653
Q ss_pred CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCC
Q 040242 515 NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLD 594 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~ 594 (662)
. ...++||+.|+|||++..+.+...-|+||.|||+|--++|..||..+++..+.. + -...+-|.-
T Consensus 722 F--RrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQI-----Q-------NAaFMyPp~- 786 (888)
T KOG4236|consen 722 F--RRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQI-----Q-------NAAFMYPPN- 786 (888)
T ss_pred h--hhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHh-----h-------ccccccCCC-
Confidence 3 334689999999999999999999999999999999999999998654432211 0 011111111
Q ss_pred CCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 595 YFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 595 ~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
--.+.....++|+...|+..-++|-+..+.+.
T Consensus 787 -PW~eis~~AidlIn~LLqVkm~kRysvdk~ls 818 (888)
T KOG4236|consen 787 -PWSEISPEAIDLINNLLQVKMRKRYSVDKSLS 818 (888)
T ss_pred -chhhcCHHHHHHHHHHHHHHHHHhcchHhhcc
Confidence 11234455667777788888888887766554
No 385
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=2.9e-30 Score=283.54 Aligned_cols=264 Identities=20% Similarity=0.275 Sum_probs=184.3
Q ss_pred hccCCcccceeeeeCceEEEEEEeC----------------CCCcEEEEEEeeccchhhHHHH--------------HHH
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIP----------------STGLEVAIKRVAHNSRQGMKEF--------------VAE 402 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~----------------~~g~~vavK~~~~~~~~~~~~f--------------~~E 402 (662)
..++|++.++||+|+||.||+|.+. ..++.||||++........++| ..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4678999999999999999999752 2346799999876543333333 346
Q ss_pred HHHhhccccccc-----eeeeeeEec--------cCeeeEEEeccCCCCcchhccccccc-------------------c
Q 040242 403 ITSMGRLRHRNL-----VQLHGWCRK--------QDELLLVYDYVPNGSLDKLLFDNDQQ-------------------K 450 (662)
Q Consensus 403 i~~l~~l~H~ni-----v~l~~~~~~--------~~~~~lV~E~~~~gsL~~~l~~~~~~-------------------~ 450 (662)
+.++.+++|.++ ++++++|.. ++..+|||||+++++|.++|+..... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777776654 677887753 35689999999999999998743110 1
Q ss_pred cccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcceecccCCcccCc
Q 040242 451 KKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQTTHIVGTLGYLAP 530 (662)
Q Consensus 451 ~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aP 530 (662)
...++|..+..++.|++++|.|||+ .+|+||||||+||+++.++.+||+|||+++..............+++.|+||
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aP 379 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPP 379 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeCh
Confidence 1345788899999999999999999 8999999999999999999999999999976544322222223457899999
Q ss_pred ccccCCCC----------------------CcchhHHHHHHHHHHHHcCCC-CCCcccchh------hHHHHHHHHHHhh
Q 040242 531 ELTRTGKA----------------------TTSTDVFGFGTLMLEVACGRR-PIEPQRTAM------ELVLVDWVRELHS 581 (662)
Q Consensus 531 E~~~~~~~----------------------t~ksDV~S~Gvvl~elltG~~-p~~~~~~~~------~~~l~~~~~~~~~ 581 (662)
|.+..... ..+.||||+||+++||++|.. |+....... ...+..|. .+.
T Consensus 380 E~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r--~~~ 457 (507)
T PLN03224 380 EELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWR--MYK 457 (507)
T ss_pred hhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHH--hhc
Confidence 98753321 234799999999999999875 664321110 01111221 111
Q ss_pred cCccccccCCCCCCCCHHHHHHHHHHHHHccCCCC---CCCCCHHHHHHH
Q 040242 582 QGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHP---DFRPSTRRVVQF 628 (662)
Q Consensus 582 ~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP---~~RPt~~eVl~~ 628 (662)
... .+-.. .........+|+.+|+..+| .+|+|+.|+++|
T Consensus 458 ~~~----~~~~~---~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 458 GQK----YDFSL---LDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred ccC----CCccc---ccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 111 11111 11234556777788888765 789999999975
No 386
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=279.24 Aligned_cols=241 Identities=23% Similarity=0.303 Sum_probs=195.2
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEEEe
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV~E 432 (662)
+..|.....+|.|+|+.|-++....+++..+||++.+... +-.+|+.++.+. .||||+++.+.+....+.++|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheecccccc----ccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 5677778889999999999999999999999999976622 223566555555 79999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEe-CCCCCeEEeecccccccc
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLI-DADLNPKLGDFGLARAYD 511 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll-~~~~~~kL~DfGla~~~~ 511 (662)
.+.++-|.+.+...+ ..-.++..|+.+|+.++.|||+ ++++||||||+|||+ ++.++++|+|||.++...
T Consensus 397 ~l~g~ell~ri~~~~------~~~~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~ 467 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKP------EFCSEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE 467 (612)
T ss_pred hccccHHHHHHHhcc------hhHHHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence 999988877774332 2226777899999999999999 899999999999999 688999999999998765
Q ss_pred CCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 512 HNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 512 ~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
.. ....+-|..|.|||++....+++++|+||||++||+|++|+.||...... ..+ ......
T Consensus 468 ~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei----~~~i~~--------- 528 (612)
T KOG0603|consen 468 RS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEI----HTRIQM--------- 528 (612)
T ss_pred hh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHH----HHhhcC---------
Confidence 44 22235688999999999999999999999999999999999999865433 111 111111
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
..+.....+...+|+.+||+.||.+||+|.++..+
T Consensus 529 --~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 529 --PKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred --CccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 11224455667788899999999999999999875
No 387
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.9e-31 Score=265.34 Aligned_cols=241 Identities=24% Similarity=0.318 Sum_probs=193.7
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV 430 (662)
.+|....+||+|+||+|.+|..+++.+.+|||+++++. ....+--..|-++|... +-|.++++..++...+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46888999999999999999999999999999997762 22222334566666655 678999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
|||+.||+|--++.+ -..+.+....-.+..||-||-+||+ ++|+.||||..|||||.+|.+||+|||+++--
T Consensus 429 MEyvnGGDLMyhiQQ-----~GkFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQ-----VGKFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred EEEecCchhhhHHHH-----hcccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeeccccccc
Confidence 999999999888843 3456677788889999999999999 99999999999999999999999999999832
Q ss_pred cCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccC
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAID 590 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id 590 (662)
-- ....+...+||+.|+|||++....|....|.|||||+||||+.|++||++.++.+ +..-+. +
T Consensus 501 i~-~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~e---lF~aI~------------e 564 (683)
T KOG0696|consen 501 IF-DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDE---LFQAIM------------E 564 (683)
T ss_pred cc-CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHH---HHHHHH------------H
Confidence 11 1223445799999999999999999999999999999999999999999765432 111111 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHccCCCCCCCC
Q 040242 591 PTLDYFDPQEAELVLTLGLLCCDPHPDFRP 620 (662)
Q Consensus 591 ~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP 620 (662)
. --.|+.....+...+....+...|.+|.
T Consensus 565 h-nvsyPKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 565 H-NVSYPKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred c-cCcCcccccHHHHHHHHHHhhcCCcccc
Confidence 1 1234555666677777788888888885
No 388
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-30 Score=263.93 Aligned_cols=256 Identities=25% Similarity=0.372 Sum_probs=197.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc--hh-----hHHHHHHHHHHhhccccccceeeeeeEec-cCe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--RQ-----GMKEFVAEITSMGRLRHRNLVQLHGWCRK-QDE 426 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--~~-----~~~~f~~Ei~~l~~l~H~niv~l~~~~~~-~~~ 426 (662)
++|-..++||+|||+.|||+.+....+.||||+-..+. +. -.+...+|..+.+.|.||.||++++|+.- .+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 45777889999999999999998889999999764432 11 12446789999999999999999999864 557
Q ss_pred eeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeC---CCCCeEEee
Q 040242 427 LLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLID---ADLNPKLGD 503 (662)
Q Consensus 427 ~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~---~~~~~kL~D 503 (662)
.|-|.|||+|.+|+-+|+.+ ..+++++...|+.||..||.||.+. ..+|||-||||.||||- .-|.+||+|
T Consensus 543 FCTVLEYceGNDLDFYLKQh-----klmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITD 616 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQH-----KLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITD 616 (775)
T ss_pred ceeeeeecCCCchhHHHHhh-----hhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeee
Confidence 89999999999999999654 5688999999999999999999974 58899999999999994 457799999
Q ss_pred ccccccccCCCCC------cceecccCCcccCcccccCC----CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHH
Q 040242 504 FGLARAYDHNINP------QTTHIVGTLGYLAPELTRTG----KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLV 573 (662)
Q Consensus 504 fGla~~~~~~~~~------~~~~~~gt~~y~aPE~~~~~----~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~ 573 (662)
|||++.++.+... -+...+||..|++||++.-+ +.+.|.||||.|||+|..+.|+.||...... ..
T Consensus 617 FGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ--Qd-- 692 (775)
T KOG1151|consen 617 FGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ--QD-- 692 (775)
T ss_pred cchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH--HH--
Confidence 9999998764322 22346899999999987533 5788999999999999999999999865321 11
Q ss_pred HHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHH
Q 040242 574 DWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVV 626 (662)
Q Consensus 574 ~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl 626 (662)
.+....+..+-.-... ..+....+...++++||+..-+.|-...++.
T Consensus 693 -----ILqeNTIlkAtEVqFP-~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 693 -----ILQENTILKATEVQFP-PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred -----HHhhhchhcceeccCC-CCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 1122222222222211 0122344567888999999988887666554
No 389
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=2e-31 Score=253.73 Aligned_cols=266 Identities=27% Similarity=0.404 Sum_probs=201.7
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hh-hHHHHHHHHHHhhccccccceeeeeeEecc--------C
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQ-GMKEFVAEITSMGRLRHRNLVQLHGWCRKQ--------D 425 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~-~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~--------~ 425 (662)
.|....+||+|.||.||+|+.+.+|+.||+|++..+. ++ --...++|+.+|..|+|+|++.+++.|... .
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~ 97 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRA 97 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccc
Confidence 3555678999999999999999999999998764422 22 233458899999999999999999998543 2
Q ss_pred eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecc
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFG 505 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 505 (662)
..++||++|+. +|.-+|.+. ...++..++.++++++..||.|+|. ..|+|||+|+.|+|++.++.+||+|||
T Consensus 98 t~ylVf~~ceh-DLaGlLsn~----~vr~sls~Ikk~Mk~Lm~GL~~iHr---~kilHRDmKaaNvLIt~dgilklADFG 169 (376)
T KOG0669|consen 98 TFYLVFDFCEH-DLAGLLSNR----KVRFSLSEIKKVMKGLMNGLYYIHR---NKILHRDMKAANVLITKDGILKLADFG 169 (376)
T ss_pred eeeeeHHHhhh-hHHHHhcCc----cccccHHHHHHHHHHHHHHHHHHHH---hhHHhhcccHhhEEEcCCceEEeeccc
Confidence 47999999965 788777543 3568888999999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCC---CcceecccCCcccCcccccC-CCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHh-
Q 040242 506 LARAYDHNIN---PQTTHIVGTLGYLAPELTRT-GKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELH- 580 (662)
Q Consensus 506 la~~~~~~~~---~~~~~~~gt~~y~aPE~~~~-~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~- 580 (662)
+++.+....+ +..+..+-|..|.+||.+.+ ..++++.|||.-|||+.||+|+.+-+.+..+..+..++.-+..-+
T Consensus 170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~t 249 (376)
T KOG0669|consen 170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSIT 249 (376)
T ss_pred cccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCC
Confidence 9987764432 33445567999999997765 568999999999999999999998887665544444433222111
Q ss_pred -------hcCccccccCCC-C--CCCC--HH------HHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 581 -------SQGQITRAIDPT-L--DYFD--PQ------EAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 581 -------~~~~~~~~id~~-l--~~~~--~~------~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
.+-.+.+.+... + +.+. ++ .....++|+.+++..||.+|+.+.+++.+-
T Consensus 250 kevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 250 KEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHD 316 (376)
T ss_pred cccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchh
Confidence 111222222111 1 0000 11 123567889999999999999999999754
No 390
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=9.4e-30 Score=278.68 Aligned_cols=262 Identities=26% Similarity=0.369 Sum_probs=213.7
Q ss_pred cchHHHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcc-ccccceeeeeeEec
Q 040242 345 FRYSELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRK 423 (662)
Q Consensus 345 ~~~~el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~ 423 (662)
..++.+...+.-|++.+.||.|.+|.||+++.+.+++.+|+|+....... .++...|.++++.+ .|||++.++|++..
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 34455556678899999999999999999999999999999998765433 35667889999888 69999999999864
Q ss_pred -----cCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCC
Q 040242 424 -----QDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLN 498 (662)
Q Consensus 424 -----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 498 (662)
+++++||||||.+||..++++.-. ...+.|..+..|+..++.||.+||. ..++|||||-.||||+.++.
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH~---nkviHRDikG~NiLLT~e~~ 161 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLHN---NKVIHRDIKGQNVLLTENAE 161 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHhh---cceeeecccCceEEEeccCc
Confidence 358999999999999999997654 5679999999999999999999999 89999999999999999999
Q ss_pred eEEeeccccccccCCCCCcceecccCCcccCcccccCC-----CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHH
Q 040242 499 PKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRTG-----KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLV 573 (662)
Q Consensus 499 ~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~ 573 (662)
+||.|||++....... .......||+.|||||++... .++..+|+||+|++..||.-|.+|+-+..+.
T Consensus 162 VKLvDFGvSaQldsT~-grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm------ 234 (953)
T KOG0587|consen 162 VKLVDFGVSAQLDSTV-GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM------ 234 (953)
T ss_pred EEEeeeeeeeeeeccc-ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh------
Confidence 9999999998766543 233446899999999998643 3667899999999999999999998754331
Q ss_pred HHHHHHhhcCccccccCCCC-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 574 DWVRELHSQGQITRAIDPTL-DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 574 ~~~~~~~~~~~~~~~id~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
+.++. -.-.|.. -..+....+++.+++..||..|-.+||++.+++++
T Consensus 235 ---raLF~-----IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 235 ---RALFL-----IPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ---hhhcc-----CCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 11110 0112333 22355678889999999999999999999998864
No 391
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=3.1e-30 Score=281.25 Aligned_cols=246 Identities=28% Similarity=0.411 Sum_probs=188.1
Q ss_pred CcccceeeeeCceE-EEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEEEecc
Q 040242 357 FREKNLVGSGGFGK-VYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 357 f~~~~~LG~G~~g~-Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
|...+++|.|..|+ ||+|.. .|+.||||++-.... .-..+|+..|+.- +|||||++++.-.+....|+..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~e~~---~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLEEFF---DFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhhHhH---HHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 55567899999886 799999 688999999854432 2346799988887 6999999999988899999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCC---C--CCeEEeecccccc
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDA---D--LNPKLGDFGLARA 509 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~---~--~~~kL~DfGla~~ 509 (662)
..+|++++.... .......--..+.+..|+++||++||+ .+||||||||+||||+. + .+++|+|||+++.
T Consensus 586 -~~sL~dlie~~~-~d~~~~~~i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 586 -ACSLQDLIESSG-LDVEMQSDIDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred -hhhHHHHHhccc-cchhhcccccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 679999997641 111111113457789999999999999 89999999999999976 2 5699999999998
Q ss_pred ccCCCCC--cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcC-CCCCCcccchhhHHHHHHHHHHhhcCccc
Q 040242 510 YDHNINP--QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACG-RRPIEPQRTAMELVLVDWVRELHSQGQIT 586 (662)
Q Consensus 510 ~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG-~~p~~~~~~~~~~~l~~~~~~~~~~~~~~ 586 (662)
...+... ......||.||+|||.+....-+.+.||||+||++|+.++| ..||...-.... ++.
T Consensus 661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~--------------NIl 726 (903)
T KOG1027|consen 661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQA--------------NIL 726 (903)
T ss_pred cCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhh--------------hhh
Confidence 8765432 23456899999999999988888899999999999999996 889975432211 111
Q ss_pred cccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 587 RAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 587 ~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
.-. ..+....+....+..+|+.+|++++|..||++.+|+.
T Consensus 727 ~~~-~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 727 TGN-YTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred cCc-cceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhC
Confidence 100 1110011111116778999999999999999999985
No 392
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2e-30 Score=249.18 Aligned_cols=263 Identities=24% Similarity=0.359 Sum_probs=204.2
Q ss_pred cccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEecc-----CeeeEE
Q 040242 358 REKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ-----DELLLV 430 (662)
Q Consensus 358 ~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~-----~~~~lV 430 (662)
+..+.||-|.||.||...++.+|+.||.|++... .-...+.+.+|+++|...+|.|++..++...-. .++|++
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 3467899999999999999999999999998654 233457899999999999999999988876543 367899
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
+|.| ..+|.+++.. ...|+-+...-+..||++||+|||+ .+|.||||||.|+|++.|..+||||||+++..
T Consensus 136 TELm-QSDLHKIIVS-----PQ~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLARve 206 (449)
T KOG0664|consen 136 TELM-QSDLHKIIVS-----PQALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLARTW 206 (449)
T ss_pred HHHH-Hhhhhheecc-----CCCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEeccccccccc
Confidence 9999 6688888854 3567888888899999999999999 89999999999999999999999999999987
Q ss_pred cCCCCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHH--------HHhh
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVR--------ELHS 581 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~--------~~~~ 581 (662)
+.+.....+..+-|..|.|||++.+. .++.+.||||.|||+.||+..+..|....+..+..++.-+- +.-.
T Consensus 207 e~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 207 DQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred chhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence 76666666666779999999999875 58899999999999999999999998776655554322110 0011
Q ss_pred cCccccccC--------CCCCC--CCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 582 QGQITRAID--------PTLDY--FDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 582 ~~~~~~~id--------~~l~~--~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
+|.....+. +.+.. -+.....+...+..+++..||+.|-+..+.+.++
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 121111111 12211 1112233445666678999999999999998876
No 393
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=7e-28 Score=235.48 Aligned_cols=212 Identities=33% Similarity=0.579 Sum_probs=185.4
Q ss_pred eeeeCceEEEEEEeCCCCcEEEEEEeeccchh-hHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCcch
Q 040242 363 VGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ-GMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDK 441 (662)
Q Consensus 363 LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~ 441 (662)
||+|.+|.||++....+++.+++|++...... ..+.+.+|+..+++++|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 68999999999999777899999999766443 45678999999999999999999999999999999999999999999
Q ss_pred hcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCC-CCCeEEeeccccccccCCCCCccee
Q 040242 442 LLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDA-DLNPKLGDFGLARAYDHNINPQTTH 520 (662)
Q Consensus 442 ~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-~~~~kL~DfGla~~~~~~~~~~~~~ 520 (662)
++.... ..+++..++.++.+++++|.+||+ .+++|+||+|.||+++. ++.++|+|||.+........ ....
T Consensus 81 ~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~ 152 (215)
T cd00180 81 LLKENE----GKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKT 152 (215)
T ss_pred HHHhcc----CCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhc
Confidence 985431 358899999999999999999999 89999999999999999 89999999999987654321 1233
Q ss_pred cccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHH
Q 040242 521 IVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQ 599 (662)
Q Consensus 521 ~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~ 599 (662)
..+...|++||..... ..+.+.|+|++|+++++|
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------- 187 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------- 187 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------
Confidence 4578899999998877 788999999999999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 600 EAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 600 ~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
..+.+++.+|++.+|++||++.++++.+
T Consensus 188 --~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 --PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred --HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 3477889999999999999999998753
No 394
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=1.2e-28 Score=259.87 Aligned_cols=204 Identities=27% Similarity=0.407 Sum_probs=174.4
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
-|...+.||-|+||+|.++...++...+|+|.+++.. +......++|-.+|.....+-||+|+-.|.+++.+|+|||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 4777889999999999999998888899999997764 3344567889999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc-
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD- 511 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~- 511 (662)
|++||++-.+|.+. ..+.+...+..+..+.+|+.+.|. .++|||||||+|||||.+|.+||+|||||.-+.
T Consensus 710 YIPGGDmMSLLIrm-----gIFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW 781 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRM-----GIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 781 (1034)
T ss_pred ccCCccHHHHHHHh-----ccCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeecccccccee
Confidence 99999999988543 457777777788899999999999 899999999999999999999999999996431
Q ss_pred --------CCCCC--------------------------------cceecccCCcccCcccccCCCCCcchhHHHHHHHH
Q 040242 512 --------HNINP--------------------------------QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLM 551 (662)
Q Consensus 512 --------~~~~~--------------------------------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl 551 (662)
++... .....+||+.|+|||++....++..+|.||.||||
T Consensus 782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil 861 (1034)
T KOG0608|consen 782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVIL 861 (1034)
T ss_pred ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHH
Confidence 10000 00124699999999999998999999999999999
Q ss_pred HHHHcCCCCCCcccch
Q 040242 552 LEVACGRRPIEPQRTA 567 (662)
Q Consensus 552 ~elltG~~p~~~~~~~ 567 (662)
|||+.|+.||....+.
T Consensus 862 ~em~~g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 862 YEMLVGQPPFLADTPG 877 (1034)
T ss_pred HHHhhCCCCccCCCCC
Confidence 9999999999866543
No 395
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=5.3e-29 Score=231.04 Aligned_cols=201 Identities=29% Similarity=0.392 Sum_probs=169.3
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeecc-chhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEEEeccCCC
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLVYDYVPNG 437 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~~~g 437 (662)
...||+|++|.|-+-++..+|...|+|++... ..+..++.+.|+.+..+- .+|.+|.++|........++.||.| .-
T Consensus 51 i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M-~t 129 (282)
T KOG0984|consen 51 IEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM-DT 129 (282)
T ss_pred hhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh-hh
Confidence 56799999999999999999999999999764 445567788899876654 7999999999999999999999999 66
Q ss_pred CcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCc
Q 040242 438 SLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQ 517 (662)
Q Consensus 438 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~ 517 (662)
||+.+-.+.- .+...+++.-+=+|+..+..||.|||+. ..++|||+||+|||++.+|++||||||++..+.+.. .
T Consensus 130 Sldkfy~~v~-~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi--A 204 (282)
T KOG0984|consen 130 SLDKFYRKVL-KKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI--A 204 (282)
T ss_pred hHHHHHHHHH-hcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeehhhh--H
Confidence 8887654322 2256788888899999999999999996 889999999999999999999999999998765432 2
Q ss_pred ceecccCCcccCcccccC----CCCCcchhHHHHHHHHHHHHcCCCCCCcccc
Q 040242 518 TTHIVGTLGYLAPELTRT----GKATTSTDVFGFGTLMLEVACGRRPIEPQRT 566 (662)
Q Consensus 518 ~~~~~gt~~y~aPE~~~~----~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~ 566 (662)
.+...|-..|||||.+.. ..|+-|+||||+|+.+.||.+++.||+....
T Consensus 205 kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 205 KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 233467889999998743 3688999999999999999999999985543
No 396
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-28 Score=242.86 Aligned_cols=248 Identities=24% Similarity=0.319 Sum_probs=192.2
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV 430 (662)
++|...++||+|+|.+|-.+.++.+.+.+|+|+++++ ..+.+.=...|-.+..+. +||.+|.+..++..+..+++|
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv 329 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV 329 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence 5788899999999999999999999999999998764 222333344555555555 799999999999999999999
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
.||+++|+|--++.+ ...|+++........|.-||.|||+ .+|+.||||..|||+|.+|.+||+|+|+++--
T Consensus 330 ieyv~ggdlmfhmqr-----qrklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 330 IEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEecCcceeeehhh-----hhcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeecccchhhcC
Confidence 999999999777633 3468888888889999999999999 99999999999999999999999999999843
Q ss_pred cCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCccc-chhhHHHHHHHHHHhhcCcccccc
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQR-TAMELVLVDWVRELHSQGQITRAI 589 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~-~~~~~~l~~~~~~~~~~~~~~~~i 589 (662)
-.. ...+...+||+.|+|||++.+..+....|.|++||+++||+.|+.||+--. ...+..-.+++.+..-+..
T Consensus 402 l~~-gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq----- 475 (593)
T KOG0695|consen 402 LGP-GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ----- 475 (593)
T ss_pred CCC-CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc-----
Confidence 222 234456799999999999999999999999999999999999999997211 1111222334333322211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHccCCCCCCCC
Q 040242 590 DPTLDYFDPQEAELVLTLGLLCCDPHPDFRP 620 (662)
Q Consensus 590 d~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RP 620 (662)
+ ..+.....+...+...-|..||.+|.
T Consensus 476 ---i-riprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 476 ---I-RIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ---c-cccceeehhhHHHHHHhhcCCcHHhc
Confidence 1 11222333445566677888888875
No 397
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2.5e-29 Score=259.71 Aligned_cols=249 Identities=23% Similarity=0.319 Sum_probs=205.2
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
+++....||-||||.|=+.........+|+|++++. .....+....|-.+|.+.+.|.||+++--+.+.+..|++||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 344566799999999999988655555788877654 34445677899999999999999999999999999999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
-|-||.|...|.+ +..++......++..+.+|+.|||. ++||.|||||+|++|+.+|-+||.|||.|+.+..
T Consensus 501 aClGGElWTiLrd-----Rg~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~ 572 (732)
T KOG0614|consen 501 ACLGGELWTILRD-----RGSFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGS 572 (732)
T ss_pred hhcCchhhhhhhh-----cCCcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhcc
Confidence 9999999999954 4567777788889999999999999 9999999999999999999999999999998876
Q ss_pred CCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
+ ..+-..+||+.|.|||++.++....+.|.|++|+++|||++|++||...++.....++ +.-+|.
T Consensus 573 g--~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~I------------LkGid~- 637 (732)
T KOG0614|consen 573 G--RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLI------------LKGIDK- 637 (732)
T ss_pred C--CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH------------Hhhhhh-
Confidence 4 4556689999999999999988999999999999999999999999987654333221 111111
Q ss_pred CCCCCHHHHHHHHHHHHHccCCCCCCCCC-----HHHHHHH
Q 040242 593 LDYFDPQEAELVLTLGLLCCDPHPDFRPS-----TRRVVQF 628 (662)
Q Consensus 593 l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt-----~~eVl~~ 628 (662)
..++....+...+|+++.+..+|.+|.- +.+|-++
T Consensus 638 -i~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH 677 (732)
T KOG0614|consen 638 -IEFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH 677 (732)
T ss_pred -hhcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh
Confidence 1344455666788899999999999976 6676664
No 398
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=7.7e-27 Score=231.95 Aligned_cols=200 Identities=33% Similarity=0.502 Sum_probs=174.6
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh-hHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccC
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ-GMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVP 435 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~-~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~ 435 (662)
|...+.||+|++|.||++....+++.+++|.+...... ..+.+.+|++.+.+++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 45678899999999999999877899999999876544 66788999999999999999999999999999999999999
Q ss_pred CCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC
Q 040242 436 NGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN 515 (662)
Q Consensus 436 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~ 515 (662)
+++|.+++.... ..+++.....++.+++.+|.+||+ .+++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~~~L~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~ 153 (225)
T smart00221 81 GGDLFDYLRKKG----GKLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA 153 (225)
T ss_pred CCCHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc
Confidence 999999986432 117899999999999999999999 7999999999999999999999999999987755421
Q ss_pred CcceecccCCcccCcccc-cCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 040242 516 PQTTHIVGTLGYLAPELT-RTGKATTSTDVFGFGTLMLEVACGRRPIEP 563 (662)
Q Consensus 516 ~~~~~~~gt~~y~aPE~~-~~~~~t~ksDV~S~Gvvl~elltG~~p~~~ 563 (662)
.......++..|++||.+ ....++.++|||+||++++||++|+.||..
T Consensus 154 ~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 154 ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 122334678899999998 666788899999999999999999999965
No 399
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=4.2e-28 Score=251.23 Aligned_cols=286 Identities=22% Similarity=0.285 Sum_probs=223.3
Q ss_pred CccchhhhccCccccchHHHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccc
Q 040242 331 DILEDWEVEYGACRFRYSELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLR 410 (662)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~ 410 (662)
.+...|....|..++.+-|+.. .+|......|+|-|++|.+|.+...|..||||++..+... .+.=+.|+++|++|+
T Consensus 410 ~L~DNWdDaEGYYrv~igE~LD--~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M-~KtGl~EleiLkKL~ 486 (752)
T KOG0670|consen 410 GLQDNWDDAEGYYRVRIGELLD--SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVM-HKTGLKELEILKKLN 486 (752)
T ss_pred ccccCcccccceEEEehhhhhc--ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHH-hhhhhHHHHHHHHhh
Confidence 3456788777888888888875 6799999999999999999999888999999999776432 233478999999995
Q ss_pred ------cccceeeeeeEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeC
Q 040242 411 ------HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHR 484 (662)
Q Consensus 411 ------H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~ 484 (662)
-.|+++++..|...+++|||+|-+ .-+|.+.|+.... ...|........+.|+.-||..|.. .+|+|.
T Consensus 487 ~AD~Edk~Hclrl~r~F~hknHLClVFE~L-slNLRevLKKyG~--nvGL~ikaVRsYaqQLflALklLK~---c~vlHa 560 (752)
T KOG0670|consen 487 DADPEDKFHCLRLFRHFKHKNHLCLVFEPL-SLNLREVLKKYGR--NVGLHIKAVRSYAQQLFLALKLLKK---CGVLHA 560 (752)
T ss_pred ccCchhhhHHHHHHHHhhhcceeEEEehhh-hchHHHHHHHhCc--ccceeehHHHHHHHHHHHHHHHHHh---cCeeec
Confidence 367899999999999999999988 6799999976542 5678899999999999999999999 899999
Q ss_pred CcCCCceEeCCCC-CeEEeeccccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCc
Q 040242 485 DVKPSNVLIDADL-NPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEP 563 (662)
Q Consensus 485 Dlkp~NIll~~~~-~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~ 563 (662)
||||.|||+++.- .+||||||.|.....+ ..+...-+..|.|||++.+..|....|+||.||+||||.||+..|.+
T Consensus 561 DIKPDNiLVNE~k~iLKLCDfGSA~~~~en---eitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG 637 (752)
T KOG0670|consen 561 DIKPDNILVNESKNILKLCDFGSASFASEN---EITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPG 637 (752)
T ss_pred ccCccceEeccCcceeeeccCccccccccc---cccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCC
Confidence 9999999998765 4899999999876554 23334556789999999999999999999999999999999999986
Q ss_pred ccchhhHHHHHHHH-----HHhhcCc---------------------------cccccCC------------CCCCCCHH
Q 040242 564 QRTAMELVLVDWVR-----ELHSQGQ---------------------------ITRAIDP------------TLDYFDPQ 599 (662)
Q Consensus 564 ~~~~~~~~l~~~~~-----~~~~~~~---------------------------~~~~id~------------~l~~~~~~ 599 (662)
...-...-+..-+. .++..+. ++..+.| .+......
T Consensus 638 ~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~ 717 (752)
T KOG0670|consen 638 RTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPK 717 (752)
T ss_pred CCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHH
Confidence 54432222211111 1111111 1111112 11222334
Q ss_pred HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 600 EAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 600 ~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
....+..|...|+..||++|-|..+.+++
T Consensus 718 ~~~~~rdLLdkml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 718 IVQQLRDLLDKMLILDPEKRITVNQALKH 746 (752)
T ss_pred HHHHHHHHHHHHhccChhhcCCHHHHhcC
Confidence 45667889999999999999999999864
No 400
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.9e-26 Score=238.13 Aligned_cols=144 Identities=24% Similarity=0.333 Sum_probs=118.9
Q ss_pred ccccchHHHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccc-----c---cc
Q 040242 342 ACRFRYSELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLR-----H---RN 413 (662)
Q Consensus 342 ~~~~~~~el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-----H---~n 413 (662)
.+...+-|... ..+|...++||.|.|++||++.+..+.+.||+|+.+... .-.+.-+.||++|++++ | ..
T Consensus 66 YHpV~IGD~F~-~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq-hYtEaAlDEIklL~~v~~~Dp~~~~~~~ 143 (590)
T KOG1290|consen 66 YHPVRIGDVFN-GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ-HYTEAALDEIKLLQQVREGDPNDPGKKC 143 (590)
T ss_pred Cceeecccccc-CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh-HHHHHHHHHHHHHHHHHhcCCCCCCCce
Confidence 33334444432 367899999999999999999999999999999986542 22345688999999984 3 46
Q ss_pred ceeeeeeEecc----CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCC
Q 040242 414 LVQLHGWCRKQ----DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPS 489 (662)
Q Consensus 414 iv~l~~~~~~~----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~ 489 (662)
||+|++.|... .++++|+|+. |-+|..+|.... ...++.....+|++||+.||.|||.+ .+|||-||||+
T Consensus 144 VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~---YrGlpl~~VK~I~~qvL~GLdYLH~e--cgIIHTDlKPE 217 (590)
T KOG1290|consen 144 VVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSN---YRGLPLSCVKEICRQVLTGLDYLHRE--CGIIHTDLKPE 217 (590)
T ss_pred eeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhC---CCCCcHHHHHHHHHHHHHHHHHHHHh--cCccccCCCcc
Confidence 99999998654 4899999999 889999997664 56789999999999999999999997 58999999999
Q ss_pred ceEe
Q 040242 490 NVLI 493 (662)
Q Consensus 490 NIll 493 (662)
|||+
T Consensus 218 NvLl 221 (590)
T KOG1290|consen 218 NVLL 221 (590)
T ss_pred eeee
Confidence 9998
No 401
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.94 E-value=2.5e-27 Score=222.92 Aligned_cols=253 Identities=22% Similarity=0.311 Sum_probs=195.3
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccc-cccceeeeeeEeccC--eeeEE
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQD--ELLLV 430 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~--~~~lV 430 (662)
.++|++.+++|+|.++.||.|....++++++||.++... .+.+.+|+++|..|+ ||||+++++...+.. ...||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 467888999999999999999988889999999996543 456788999999997 999999999886654 67899
Q ss_pred EeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC-CCeEEeecccccc
Q 040242 431 YDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD-LNPKLGDFGLARA 509 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~DfGla~~ 509 (662)
+||+.+.+...+- ..|+...+...+.+++.||.|+|+ .||.|||+||.|+++|.. ..++|+|+|||..
T Consensus 114 FE~v~n~Dfk~ly--------~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEF 182 (338)
T KOG0668|consen 114 FEYVNNTDFKQLY--------PTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEF 182 (338)
T ss_pred hhhhccccHHHHh--------hhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhh
Confidence 9999888876654 567788888899999999999999 899999999999999865 4599999999998
Q ss_pred ccCCCCCcceecccCCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCccc-chhhHH----------HHHHHH
Q 040242 510 YDHNINPQTTHIVGTLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQR-TAMELV----------LVDWVR 577 (662)
Q Consensus 510 ~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~-~~~~~~----------l~~~~~ 577 (662)
+...... .-.+.+..|.-||.+-.. .+...-|+|||||+|..|+..+.||.... ..++.. +..++.
T Consensus 183 YHp~~eY--nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~ 260 (338)
T KOG0668|consen 183 YHPGKEY--NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLN 260 (338)
T ss_pred cCCCcee--eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHH
Confidence 8765322 223456778899987654 46778899999999999999999997443 222222 112221
Q ss_pred HHhhcCccccccCCCCCC----------------CCHH-HHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 578 ELHSQGQITRAIDPTLDY----------------FDPQ-EAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 578 ~~~~~~~~~~~id~~l~~----------------~~~~-~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.. .-.+||.... .+.. ...+.++++.+.|..|.++|||++|.+.+
T Consensus 261 KY------~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 261 KY------QIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HH------ccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 11 1112222210 0011 13567788889999999999999998863
No 402
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=2.1e-27 Score=234.11 Aligned_cols=261 Identities=23% Similarity=0.293 Sum_probs=199.5
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEecc------C
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ------D 425 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~------~ 425 (662)
..+|...+.+|.|.- .|..+.+.-.+++||+|++... .....+.-.+|...+..++|+|+++++.++.-. .
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 356777888999988 7888888778999999988543 233456678899999999999999999998543 3
Q ss_pred eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecc
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFG 505 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 505 (662)
+.|+|||+| ..+|...+. ..++-.....|..|+++|++|||+ .+|+||||||+||++..+..+||.|||
T Consensus 95 e~y~v~e~m-~~nl~~vi~-------~elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVIL-------MELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred hHHHHHHhh-hhHHHHHHH-------HhcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccch
Confidence 679999999 779998884 446777888999999999999999 899999999999999999999999999
Q ss_pred ccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHH---------HHH
Q 040242 506 LARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLV---------DWV 576 (662)
Q Consensus 506 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~---------~~~ 576 (662)
+++..... -..+..+.|..|.|||++-+..+.+..||||.||++.||++|+.-|.+.+..++.... .+.
T Consensus 164 ~ar~e~~~--~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~ 241 (369)
T KOG0665|consen 164 LARTEDTD--FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFM 241 (369)
T ss_pred hhcccCcc--cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHH
Confidence 99975443 3455678899999999988877999999999999999999999988754432221100 001
Q ss_pred HHHhhcC-------------ccccccCCCC----CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 577 RELHSQG-------------QITRAIDPTL----DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 577 ~~~~~~~-------------~~~~~id~~l----~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.++...+ ...+.+...+ .+.+.-....+..++.+||-.||++|-+.++++++
T Consensus 242 ~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 242 KQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 1111100 0111111111 11122344567788999999999999999999986
No 403
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.93 E-value=3.3e-27 Score=251.44 Aligned_cols=253 Identities=25% Similarity=0.369 Sum_probs=205.4
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
.+|...+.+|+|.||.|||++++..++..|+|.++.......+-..+|+-+++..+|+||+.++|-+...+.++++||||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 56777899999999999999999999999999998887777777788999999999999999999999999999999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
.+|+|.+.-+- ..+|+..++-.+++...+||+|||+ .+-+|||||-.||++++.+.+|++|||.+-.+....
T Consensus 95 gggslQdiy~~-----TgplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsaqitati 166 (829)
T KOG0576|consen 95 GGGSLQDIYHV-----TGPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI 166 (829)
T ss_pred CCCcccceeee-----cccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchhhhhhhh
Confidence 99999997643 5679999999999999999999999 788999999999999999999999999887665432
Q ss_pred CCcceecccCCcccCcccc---cCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCC
Q 040242 515 NPQTTHIVGTLGYLAPELT---RTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDP 591 (662)
Q Consensus 515 ~~~~~~~~gt~~y~aPE~~---~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~ 591 (662)
. ......||+.|||||+. ..+.+.+++|||++|+...|+---.+|.....+. ..+. +.. ....+|
T Consensus 167 ~-KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm--r~l~-----LmT----kS~~qp 234 (829)
T KOG0576|consen 167 A-KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM--RALF-----LMT----KSGFQP 234 (829)
T ss_pred h-hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH--HHHH-----Hhh----ccCCCC
Confidence 2 33346899999999976 4567899999999999999998877776543221 1110 000 112222
Q ss_pred CCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 592 TLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 592 ~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
.-..-.....+.+-.+++.|+..+|.+||+++..++
T Consensus 235 p~lkDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 235 PTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 221222344566778888999999999999887664
No 404
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.93 E-value=1.4e-26 Score=242.98 Aligned_cols=197 Identities=25% Similarity=0.357 Sum_probs=169.7
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh--------hHHHHHHHHHHhhccc---cccceeeeeeEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ--------GMKEFVAEITSMGRLR---HRNLVQLHGWCRK 423 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~--------~~~~f~~Ei~~l~~l~---H~niv~l~~~~~~ 423 (662)
.+|...+.+|+|+||.|+.|.++.+...|+||.+.+..-- ..-..-.||.+|..++ |+||+++++++++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 3578889999999999999999999999999998665211 1113457999999997 9999999999999
Q ss_pred cCeeeEEEecc-CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEe
Q 040242 424 QDELLLVYDYV-PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLG 502 (662)
Q Consensus 424 ~~~~~lV~E~~-~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 502 (662)
++.+||+||-. ++-+|.+++.. +..+++.+...|++|++.|+++||+ ++|+|||||-+||.++.+|.+||+
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~-----kp~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~kli 712 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEF-----KPRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFVKLI 712 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhc-----cCccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeEEEe
Confidence 99999999975 45678888854 4568899999999999999999999 899999999999999999999999
Q ss_pred eccccccccCCCCCcceecccCCcccCcccccCCCC-CcchhHHHHHHHHHHHHcCCCCCC
Q 040242 503 DFGLARAYDHNINPQTTHIVGTLGYLAPELTRTGKA-TTSTDVFGFGTLMLEVACGRRPIE 562 (662)
Q Consensus 503 DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-t~ksDV~S~Gvvl~elltG~~p~~ 562 (662)
|||.+.....+ .....+||.+|.|||++.+.+| ...-|||++|++||.++....||.
T Consensus 713 dfgsaa~~ksg---pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 713 DFGSAAYTKSG---PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred eccchhhhcCC---CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99999876543 3345689999999999988765 566899999999999999988875
No 405
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4.8e-26 Score=219.32 Aligned_cols=252 Identities=23% Similarity=0.313 Sum_probs=188.9
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcc-ccccceeeee-eEeccCeeeEEEe
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRL-RHRNLVQLHG-WCRKQDELLLVYD 432 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~~-~~~~~~~~~lV~E 432 (662)
+.|.+.+.||+|.||.+-++.++.+...+++|.+.... ...++|.+|...=-.| .|.||+.-++ .++..+.+++++|
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE 102 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQE 102 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeec
Confidence 56788999999999999999999999999999987653 3457899998765555 5899998776 4667778999999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEe-CCC-CCeEEeeccccccc
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLI-DAD-LNPKLGDFGLARAY 510 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll-~~~-~~~kL~DfGla~~~ 510 (662)
|+|.|+|.+-+.. ..+.+....+++.|+++||.|||+ .++||||||.+|||+ +.+ .++||||||+.+..
T Consensus 103 ~aP~gdL~snv~~------~GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~ 173 (378)
T KOG1345|consen 103 FAPRGDLRSNVEA------AGIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTRKV 173 (378)
T ss_pred cCccchhhhhcCc------ccccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeeccccccc
Confidence 9999999998853 346677778899999999999999 899999999999999 333 46999999999865
Q ss_pred cCCCCCcceecccCCcccCcccccCC-----CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcc
Q 040242 511 DHNINPQTTHIVGTLGYLAPELTRTG-----KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQI 585 (662)
Q Consensus 511 ~~~~~~~~~~~~gt~~y~aPE~~~~~-----~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~ 585 (662)
+.... ...-+..|.+||..... ...+.+|||.||++++..+||+.|+......++. -|-+..|..++.
T Consensus 174 g~tV~----~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~---Y~~~~~w~~rk~ 246 (378)
T KOG1345|consen 174 GTTVK----YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKP---YWEWEQWLKRKN 246 (378)
T ss_pred Cceeh----hhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCch---HHHHHHHhcccC
Confidence 43211 12235678999976432 3577899999999999999999999843322221 233444444433
Q ss_pred ccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 586 TRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 586 ~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
. .+...-.-..++++++.++-+.++|.+|=...++.++
T Consensus 247 ~-----~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 247 P-----ALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred c-----cCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 2 2211112234567778888999999999555555443
No 406
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=5.7e-26 Score=267.70 Aligned_cols=196 Identities=18% Similarity=0.280 Sum_probs=141.1
Q ss_pred cccc-ccceeeeeeE-------eccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCC
Q 040242 408 RLRH-RNLVQLHGWC-------RKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQ 479 (662)
Q Consensus 408 ~l~H-~niv~l~~~~-------~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~ 479 (662)
+++| +||.+++++| ...+..++++||+ +++|.++|... ...+++.+++.++.||++||.|||+ .
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~---~ 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNP----DRSVDAFECFHVFRQIVEIVNAAHS---Q 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcc----cccccHHHHHHHHHHHHHHHHHHHh---C
Confidence 4556 6888888887 3334578889988 67999999643 3458999999999999999999999 8
Q ss_pred CEEeCCcCCCceEeCC-------------------CCCeEEeeccccccccCCCC---------------CcceecccCC
Q 040242 480 RVVHRDVKPSNVLIDA-------------------DLNPKLGDFGLARAYDHNIN---------------PQTTHIVGTL 525 (662)
Q Consensus 480 ~ivH~Dlkp~NIll~~-------------------~~~~kL~DfGla~~~~~~~~---------------~~~~~~~gt~ 525 (662)
+|+||||||+||||+. ++.+||+|||+++....... .......||+
T Consensus 100 gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 179 (793)
T PLN00181 100 GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMS 179 (793)
T ss_pred CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCc
Confidence 9999999999999954 44566666776654221000 0011235788
Q ss_pred cccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHH
Q 040242 526 GYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVL 605 (662)
Q Consensus 526 ~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~ 605 (662)
.|+|||++.+..++.++|||||||+||||++|..|+..... .+..+... .+.+.. ........
T Consensus 180 ~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~----~~~~~~~~---------~~~~~~----~~~~~~~~ 242 (793)
T PLN00181 180 WYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR----TMSSLRHR---------VLPPQI----LLNWPKEA 242 (793)
T ss_pred ceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH----HHHHHHHh---------hcChhh----hhcCHHHH
Confidence 99999999988999999999999999999999887653211 11111000 111111 11123345
Q ss_pred HHHHHccCCCCCCCCCHHHHHHH
Q 040242 606 TLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 606 ~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.++.+||+++|.+||+|.||+++
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~h 265 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQS 265 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhhc
Confidence 77889999999999999999974
No 407
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.91 E-value=6.6e-25 Score=224.30 Aligned_cols=263 Identities=25% Similarity=0.404 Sum_probs=196.3
Q ss_pred hccCCcccceeeeeCceEEEEEEeCC---CCcEEEEEEeeccchhhHHHHHHHHHHhhccc-cccceeeeeeEeccCeee
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPS---TGLEVAIKRVAHNSRQGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQDELL 428 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~---~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~ 428 (662)
..+.|...++||+|.|++||++.+.. ..+.||+|.+...+. .....+|+++|..+. +.||+++.++...++...
T Consensus 34 ~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ 111 (418)
T KOG1167|consen 34 ISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVA 111 (418)
T ss_pred hhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCeeE
Confidence 44678889999999999999999876 678899999866533 345789999999995 999999999999999999
Q ss_pred EEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC-CCeEEeecccc
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD-LNPKLGDFGLA 507 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~DfGla 507 (662)
+|+||++.....++. ..++..++...+..+..||.++|+ .+|+||||||+|+|.+.. +.-.|.||||+
T Consensus 112 ivlp~~~H~~f~~l~--------~~l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA 180 (418)
T KOG1167|consen 112 IVLPYFEHDRFRDLY--------RSLSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLA 180 (418)
T ss_pred EEecccCccCHHHHH--------hcCCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhH
Confidence 999999999988887 346678888899999999999999 999999999999999754 56899999999
Q ss_pred ccccCCC-------------C------------------------------CcceecccCCcccCcccccC-CCCCcchh
Q 040242 508 RAYDHNI-------------N------------------------------PQTTHIVGTLGYLAPELTRT-GKATTSTD 543 (662)
Q Consensus 508 ~~~~~~~-------------~------------------------------~~~~~~~gt~~y~aPE~~~~-~~~t~ksD 543 (662)
...+... . ......+||+||.|||++.. ..-+++.|
T Consensus 181 ~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiD 260 (418)
T KOG1167|consen 181 QRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAID 260 (418)
T ss_pred HHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccc
Confidence 7221100 0 00112469999999998754 45788999
Q ss_pred HHHHHHHHHHHHcCCCCCCcccchhhH-----HHHHH--HHH-HhhcCc--ccc---------------ccC-CCC----
Q 040242 544 VFGFGTLMLEVACGRRPIEPQRTAMEL-----VLVDW--VRE-LHSQGQ--ITR---------------AID-PTL---- 593 (662)
Q Consensus 544 V~S~Gvvl~elltG~~p~~~~~~~~~~-----~l~~~--~~~-~~~~~~--~~~---------------~id-~~l---- 593 (662)
|||.|||++-+++++.||......... .+..| +++ ....|. +.+ .++ ..+
T Consensus 261 iws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~ 340 (418)
T KOG1167|consen 261 IWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSR 340 (418)
T ss_pred eeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccc
Confidence 999999999999999999643322111 01001 111 011122 111 010 000
Q ss_pred ------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 594 ------DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 594 ------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
.......+..++++..+|++.||.+|-|+++.+++
T Consensus 341 q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 341 QPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred ccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 01111223478899999999999999999999975
No 408
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=7.8e-24 Score=203.13 Aligned_cols=166 Identities=20% Similarity=0.177 Sum_probs=125.4
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP 516 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~ 516 (662)
|+|.+++... ...++|.+++.++.|+++||.|||+ .+ ||+||+++.++.+|+ ||+++......
T Consensus 1 GsL~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~lH~---~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~-- 63 (176)
T smart00750 1 VSLADILEVR----GRPLNEEEIWAVCLQCLRALRELHR---QA------KSGNILLTWDGLLKL--DGSVAFKTPEQ-- 63 (176)
T ss_pred CcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHh---cC------CcccEeEcCccceee--ccceEeecccc--
Confidence 6888888543 3469999999999999999999999 44 999999999999999 99998754422
Q ss_pred cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCC
Q 040242 517 QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYF 596 (662)
Q Consensus 517 ~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~ 596 (662)
..||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+..+..... ..++.....
T Consensus 64 ----~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~-~~~~~~~~~~~-------~~~~~~~~~ 131 (176)
T smart00750 64 ----SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELS-AILEILLNGMP-------ADDPRDRSN 131 (176)
T ss_pred ----CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhc-HHHHHHHHHhc-------cCCcccccc
Confidence 258899999999999999999999999999999999999996543211 11111211110 011111111
Q ss_pred CHHHHH--HHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 597 DPQEAE--LVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 597 ~~~~~~--~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
...... .+.+++.+||+.+|.+||++.|+++++..
T Consensus 132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 132 LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 122222 68999999999999999999999998753
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=1.3e-22 Score=214.34 Aligned_cols=168 Identities=20% Similarity=0.204 Sum_probs=131.3
Q ss_pred HHhccCCcccceeeeeCceEEEEEEeCC-CCcEEEEEEeecc-----chhhHHHHHHHHHHhhccccccceeeeeeEecc
Q 040242 351 YSATKGFREKNLVGSGGFGKVYRGVIPS-TGLEVAIKRVAHN-----SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ 424 (662)
Q Consensus 351 ~~at~~f~~~~~LG~G~~g~Vy~~~~~~-~g~~vavK~~~~~-----~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~ 424 (662)
.....+|...+.||+|+||+||+|.+.. ++..||||++... .....+.|.+|+++|++++|+|+++.+..+
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 3445789999999999999999998865 6777899987533 122356789999999999999998533322
Q ss_pred CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCc-CCCceEeCCCCCeEEee
Q 040242 425 DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDV-KPSNVLIDADLNPKLGD 503 (662)
Q Consensus 425 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dl-kp~NIll~~~~~~kL~D 503 (662)
+..++||||+++++|.... . .. ...++.+++++|.|||+ .+|+|||| ||+|||++.++.+||+|
T Consensus 91 ~~~~LVmE~~~G~~L~~~~--~----~~------~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikLiD 155 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLAR--P----HG------DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAVID 155 (365)
T ss_pred CCcEEEEEccCCCCHHHhC--c----cc------hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEEEE
Confidence 4579999999999996321 0 01 13578899999999999 89999999 99999999999999999
Q ss_pred ccccccccCCCCC-------cceecccCCcccCcccccCC
Q 040242 504 FGLARAYDHNINP-------QTTHIVGTLGYLAPELTRTG 536 (662)
Q Consensus 504 fGla~~~~~~~~~-------~~~~~~gt~~y~aPE~~~~~ 536 (662)
||+++.+...... ..+...+++.|+|||++...
T Consensus 156 FGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 156 FQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9999977543211 11345788899999988543
No 410
>cd07308 lectin_leg-like legume-like lectins: ERGIC-53, ERGL, VIP36, VIPL, EMP46, and EMP47. The legume-like (leg-like) lectins are eukaryotic intracellular sugar transport proteins with a carbohydrate recognition domain similar to that of the legume lectins. This domain binds high-mannose-type oligosaccharides for transport from the endoplasmic reticulum to the Golgi complex. These leg-like lectins include ERGIC-53, ERGL, VIP36, VIPL, EMP46, EMP47, and the UIP5 (ULP1-interacting protein 5) precursor protein. Leg-like lectins have different intracellular distributions and dynamics in the endoplasmic reticulum-Golgi system of the secretory pathway and interact with N-glycans of glycoproteins in a calcium-dependent manner, suggesting a role in glycoprotein sorting and trafficking. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "ba
Probab=99.88 E-value=5.5e-21 Score=189.80 Aligned_cols=195 Identities=21% Similarity=0.232 Sum_probs=135.5
Q ss_pred CCeeEecceeeeCCCeEEecCCCCCeeEEEEcCCceeecccccccccCCCCCceeeeeEEEEEEEEecCCCCCCCCceeE
Q 040242 31 ANLSLDGTAFVRKDGILAVSNDQGRILGHAFYPSPLRFKQLSKYNINNNTISHTALTFSTNFVFSIVPKYPQLGGHGLAF 110 (662)
Q Consensus 31 ~~~~l~G~a~~~~~~~~~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF 110 (662)
.++.+.|+|.+. ++.|+||++..++.|++||+.|+++. +|+|+|+|+|.+.. ..+||||||
T Consensus 20 ~~w~~~G~a~~~-~~~i~LT~~~~~~~G~~~~~~pi~~~-----------------~F~~~f~F~i~~~~-~~~gdG~af 80 (218)
T cd07308 20 GNWTVGGSTVIT-KNYIRLTPDVPSQSGSLWSRVPIPAK-----------------DFEIEVEFSIHGGS-GLGGDGFAF 80 (218)
T ss_pred CCeEEcCCeEEe-CCEEEeCCCCCCCEeEEEeCCCccCC-----------------CEEEEEEEEEeCCC-CCCCCEEEE
Confidence 589999999987 88999999999999999999999975 49999999998763 568999999
Q ss_pred EEccCCCCCCCCcccccCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCeeEEecCCCcccccccccccccCCCCCCC
Q 040242 111 VLMSRKQPPSCLANQYLGLPNDTSNAKFSTRILAVEFDAVQNLELQDINDNHVGIDISSLISNISEPAAYYFSKGSNIND 190 (662)
Q Consensus 111 ~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~~~~~~~~ 190 (662)
+++|... ..|+.+|..+ ..+-+||||||+.|. +....+|.+-+|.-...... ..|.....-.
T Consensus 81 ~~~~~~~----~~g~~~G~~~-------~~~Glai~fdt~~n~---~~~~p~i~~~~Ndg~~~~~~----~~d~~~~~~~ 142 (218)
T cd07308 81 WYTEEPG----SDGPLFGGPD-------KFKGLAIFFDTYDND---GKGFPSISVFLNDGTKSYDY----ETDGEKLELA 142 (218)
T ss_pred EEECCCC----CCCcccccCC-------CCCEEEEEEEcCCCC---CCCCCeEEEEEeCCCceecc----cCCCcccccc
Confidence 9999653 2445555532 234599999999985 33445665544432211000 0000000000
Q ss_pred CCcceeec-CCCcEEEEEEEeCCCcEEEEEEccCCCCCCCCCeeeeeccccc-ccccceEEeeeccCCcccceeEEecce
Q 040242 191 DNISVVLK-SGDPIQAWIDYNSQEMLINVTISPLGIPKPHRPLISYPIDLAT-VLDEYMYVGFSASTGLLTAFHNVHGWS 268 (662)
Q Consensus 191 ~~~~~~l~-~g~~~~~~I~Y~~~~~~l~V~~~~~~~~~~~~~~ls~~vdL~~-~l~~~~~vGFsastG~~~~~~~i~sW~ 268 (662)
. ..+... ++.+++++|.|+ .+.|.|.+.... +.... ..+++.. .+|+..|+||||+||...+.|+|++|.
T Consensus 143 ~-c~~~~~~~~~~~~~~I~y~--~~~l~v~i~~~~---~~~~~--~c~~~~~~~l~~~~y~G~sA~tg~~~d~~dIls~~ 214 (218)
T cd07308 143 S-CSLKFRNSNAPTTLRISYL--NNTLKVDITYSE---GNNWK--ECFTVEDVILPSQGYFGFSAQTGDLSDNHDILSVH 214 (218)
T ss_pred c-eeEecccCCCCeEEEEEEE--CCEEEEEEeCCC---CCCcc--EEEEcCCcccCCCCEEEEEeccCCCcCcEEEEEEE
Confidence 0 112222 268999999999 678899886432 11122 3334444 468899999999999999999999998
Q ss_pred ee
Q 040242 269 FK 270 (662)
Q Consensus 269 f~ 270 (662)
+.
T Consensus 215 ~~ 216 (218)
T cd07308 215 TY 216 (218)
T ss_pred ee
Confidence 74
No 411
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=2e-21 Score=205.17 Aligned_cols=275 Identities=21% Similarity=0.211 Sum_probs=200.5
Q ss_pred CCcccceeeeeCceEEEEEEeCCCC-cEEEEEEeeccchhhHHHHHHHHHHhhcccc----ccceeeeeeE-eccCeeeE
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTG-LEVAIKRVAHNSRQGMKEFVAEITSMGRLRH----RNLVQLHGWC-RKQDELLL 429 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g-~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H----~niv~l~~~~-~~~~~~~l 429 (662)
+|...++||+|+||.||++.....+ ..+|+|............+..|..++..+.. +++.++++.. ......++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 7899999999999999999986654 5788888766533333367778888888863 6888888888 47778899
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC-----CCeEEeec
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD-----LNPKLGDF 504 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-----~~~kL~Df 504 (662)
||+.+ |.+|.++..... ...++..+.++|+.|++.+|.+||+ .+++||||||.|+++... ..+.|.||
T Consensus 99 VM~l~-G~sL~dl~~~~~---~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP---PGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred EEecc-CccHHHHHHhCC---CCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 99998 999999875543 4668899999999999999999999 899999999999999865 45999999
Q ss_pred cccc--cccCCCC----Cc---ceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHH
Q 040242 505 GLAR--AYDHNIN----PQ---TTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDW 575 (662)
Q Consensus 505 Gla~--~~~~~~~----~~---~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~ 575 (662)
|+++ .+..... .. .....||..|++++...+...+++.|+||++.++.|+..|..|+...........
T Consensus 172 Glar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~--- 248 (322)
T KOG1164|consen 172 GLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSK--- 248 (322)
T ss_pred CCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHH---
Confidence 9999 4322111 11 2235699999999999999999999999999999999999999965443222110
Q ss_pred HHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCCCCCCC
Q 040242 576 VRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRDASLPQAPLDIHHEFPR 648 (662)
Q Consensus 576 ~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~~~~p~~p~~~~~~~~~ 648 (662)
+.+... .....+ . ....+..+.++...+-..+...+|....+...|.............+..|..
T Consensus 249 ~~~~~~----~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~~~~~~~~~dw~~ 313 (322)
T KOG1164|consen 249 FEKDPR----KLLTDR-F---GDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSEGSKEDSPFDWEV 313 (322)
T ss_pred HHHHhh----hhcccc-c---cCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhcCCCCCCCCcccc
Confidence 000000 000010 1 1122344455555566689999999999998876554433444444444443
No 412
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.87 E-value=6.2e-23 Score=197.68 Aligned_cols=244 Identities=18% Similarity=0.322 Sum_probs=188.2
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeecc--chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCC
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNG 437 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~g 437 (662)
..+|.+...|+.|+|++.+ ..+++|++... .....++|..|.-.|+-..||||+.++|.|.....+.++..||+.|
T Consensus 195 ~tkl~e~hsgelwrgrwqg--ndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~g 272 (448)
T KOG0195|consen 195 ITKLAESHSGELWRGRWQG--NDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFG 272 (448)
T ss_pred hhhhccCCCcccccccccC--cchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccch
Confidence 4568889999999999954 45667766443 3444578999999999999999999999999999999999999999
Q ss_pred CcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEe--eccccccccCCCC
Q 040242 438 SLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLG--DFGLARAYDHNIN 515 (662)
Q Consensus 438 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~--DfGla~~~~~~~~ 515 (662)
+|...|++.. .-..+-.+..+++.++|+|++|||+- ++-|.---|.++.+++|++.+++|+ |--++.
T Consensus 273 slynvlhe~t---~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsf------- 341 (448)
T KOG0195|consen 273 SLYNVLHEQT---SVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSF------- 341 (448)
T ss_pred HHHHHHhcCc---cEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeee-------
Confidence 9999998764 45678889999999999999999984 2345555799999999999998885 211111
Q ss_pred CcceecccCCcccCcccccCCCC---CcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCC
Q 040242 516 PQTTHIVGTLGYLAPELTRTGKA---TTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPT 592 (662)
Q Consensus 516 ~~~~~~~gt~~y~aPE~~~~~~~---t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~ 592 (662)
+.....-.+.||+||.++.++. -..+|+|||+++||||.|...||..-.+.+-. .+..-..
T Consensus 342 -qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg---------------mkialeg 405 (448)
T KOG0195|consen 342 -QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG---------------MKIALEG 405 (448)
T ss_pred -eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh---------------hhhhhcc
Confidence 0111123678999999976643 35789999999999999999999755432111 0111112
Q ss_pred C-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 593 L-DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 593 l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
+ ...++.....+.+|+.-|+..||.+||.+..|+-.|++-
T Consensus 406 lrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 406 LRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred ccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 2 344666777888999999999999999999999988763
No 413
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.86 E-value=4.7e-20 Score=191.94 Aligned_cols=259 Identities=29% Similarity=0.426 Sum_probs=198.3
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh---hHHHHHHHHHHhhccccc-cceeeeeeEeccCeeeEEEe
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ---GMKEFVAEITSMGRLRHR-NLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~---~~~~f~~Ei~~l~~l~H~-niv~l~~~~~~~~~~~lV~E 432 (662)
|...+.||.|+|+.||++... ..+++|.+...... ....+.+|+..+..+.|+ +++++.+.+......++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 78 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME 78 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence 566788999999999999995 67999998765332 467899999999999988 79999999977777899999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCC-CeEEeecccccccc
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADL-NPKLGDFGLARAYD 511 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-~~kL~DfGla~~~~ 511 (662)
++.+++|.+++...... ..+.......+..|++.++.|+|+ .+++|||+||+||+++... .++++|||+++...
T Consensus 79 ~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~ 153 (384)
T COG0515 79 YVDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLP 153 (384)
T ss_pred cCCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecC
Confidence 99999999776433210 368888999999999999999999 7899999999999999998 69999999998655
Q ss_pred CCCCC-----cceecccCCcccCcccccC---CCCCcchhHHHHHHHHHHHHcCCCCCCcccch-hhHHHHHHHHHHhhc
Q 040242 512 HNINP-----QTTHIVGTLGYLAPELTRT---GKATTSTDVFGFGTLMLEVACGRRPIEPQRTA-MELVLVDWVRELHSQ 582 (662)
Q Consensus 512 ~~~~~-----~~~~~~gt~~y~aPE~~~~---~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~-~~~~l~~~~~~~~~~ 582 (662)
..... ......|+..|+|||.+.. .......|+|++|++++++++|..|+...... ........+......
T Consensus 154 ~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 233 (384)
T COG0515 154 DPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP 233 (384)
T ss_pred CCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc
Confidence 43322 2355689999999999987 57889999999999999999999997654321 011111111111100
Q ss_pred CccccccCCCC-CCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHH
Q 040242 583 GQITRAIDPTL-DYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQF 628 (662)
Q Consensus 583 ~~~~~~id~~l-~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~ 628 (662)
...... ..........+..++..|+..+|..|.++.+....
T Consensus 234 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 -----SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred -----ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 001111 11112334567888889999999999999988764
No 414
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.84 E-value=1.1e-21 Score=220.26 Aligned_cols=254 Identities=20% Similarity=0.243 Sum_probs=191.7
Q ss_pred cccceeeeeCceEEEEEEeCCCCcEEEEEEee----c-cch-hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEE
Q 040242 358 REKNLVGSGGFGKVYRGVIPSTGLEVAIKRVA----H-NSR-QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVY 431 (662)
Q Consensus 358 ~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~----~-~~~-~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~ 431 (662)
...+++|.|.+|.|+........+..+.|.+. . ... .....+..|+.+-..++|+|++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 34688999999988887776555555555432 1 111 12223677888888899999999888888777777779
Q ss_pred eccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccccc
Q 040242 432 DYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 432 E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
|||++ +|..++... ..+.-.++..+++|+..|+.|||+ .++.|||+|++|++++.++.+||+|||.+..+.
T Consensus 401 E~~~~-Dlf~~~~~~-----~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSN-----GKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAASVFR 471 (601)
T ss_pred hcccH-HHHHHHhcc-----cccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcceeec
Confidence 99999 999998532 357788889999999999999999 899999999999999999999999999998776
Q ss_pred CCCC---CcceecccCCcccCcccccCCCCCc-chhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCcccc
Q 040242 512 HNIN---PQTTHIVGTLGYLAPELTRTGKATT-STDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITR 587 (662)
Q Consensus 512 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~t~-ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~ 587 (662)
.... .......|+..|+|||.+...++.+ ..||||.|+++..|++|+.||.......... .........
T Consensus 472 ~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~-------~~~~~~~~~ 544 (601)
T KOG0590|consen 472 YPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF-------KTNNYSDQR 544 (601)
T ss_pred cCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch-------hhhcccccc
Confidence 5443 3445578999999999999888866 4799999999999999999997554432221 000011111
Q ss_pred ccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 588 AIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 588 ~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
.+...........+.+...++.++|+.+|.+|-|+++|++
T Consensus 545 ~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 545 NIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred ccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 1111112223345666788899999999999999999986
No 415
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.82 E-value=3.3e-20 Score=199.34 Aligned_cols=214 Identities=25% Similarity=0.410 Sum_probs=166.1
Q ss_pred hhccccccceeeeeeEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCE-EeC
Q 040242 406 MGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRV-VHR 484 (662)
Q Consensus 406 l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~i-vH~ 484 (662)
|+.+.|.|+.+++|.|......+.|.+||+.|+|.+.+... ...++|.....++++|+.||.|||. .+| .|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~----~~~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~hg 73 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE----DIKLDYFFILSFIRDISKGLAYLHN---SPIGYHG 73 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc----ccCccHHHHHHHHHHHHHHHHHHhc---Ccceeee
Confidence 46789999999999999999999999999999999999764 4669999999999999999999999 444 999
Q ss_pred CcCCCceEeCCCCCeEEeeccccccccCCCC-CcceecccCCcccCcccccCC-------CCCcchhHHHHHHHHHHHHc
Q 040242 485 DVKPSNVLIDADLNPKLGDFGLARAYDHNIN-PQTTHIVGTLGYLAPELTRTG-------KATTSTDVFGFGTLMLEVAC 556 (662)
Q Consensus 485 Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~-~~~~~~~gt~~y~aPE~~~~~-------~~t~ksDV~S~Gvvl~ellt 556 (662)
.++++|+++|....+||+|||+......... .......-..-|.|||.+... ..+.+.||||||++++|+++
T Consensus 74 ~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~ 153 (484)
T KOG1023|consen 74 ALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILF 153 (484)
T ss_pred eeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHh
Confidence 9999999999999999999999987643111 111112345689999988653 15778999999999999999
Q ss_pred CCCCCCcccchh-hHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhcC
Q 040242 557 GRRPIEPQRTAM-ELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLRD 632 (662)
Q Consensus 557 G~~p~~~~~~~~-~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~~ 632 (662)
.+.||....... ...+..++.. .....+.|.+.... +....+..++..||..+|.+||++.+|-..++..
T Consensus 154 r~~~~~~~~~~~~~~eii~~~~~-----~~~~~~rP~i~~~~-e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 154 RSGPFDLRNLVEDPDEIILRVKK-----GGSNPFRPSIELLN-ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred ccCccccccccCChHHHHHHHHh-----cCCCCcCcchhhhh-hcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 999998533221 1223333332 12333444443222 4445789999999999999999999999887654
No 416
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.81 E-value=1.9e-19 Score=182.40 Aligned_cols=234 Identities=22% Similarity=0.293 Sum_probs=157.9
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc---chhhHHHHHHHHHHhhccc----------cccceeeeeeEe-
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN---SRQGMKEFVAEITSMGRLR----------HRNLVQLHGWCR- 422 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~---~~~~~~~f~~Ei~~l~~l~----------H~niv~l~~~~~- 422 (662)
+...+.||.|+++.||.+.+..+|+.+|||.+... .....+++.+|.-.+..+. |-.++-.++...
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 44578899999999999999999999999987543 3345677777776665532 223332222221
Q ss_pred --------cc---C-----eeeEEEeccCCCCcchhccc---ccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEe
Q 040242 423 --------KQ---D-----ELLLVYDYVPNGSLDKLLFD---NDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVH 483 (662)
Q Consensus 423 --------~~---~-----~~~lV~E~~~~gsL~~~l~~---~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH 483 (662)
.. . ..+++|+-+ -++|.+++.- ... ....+....++.+..|+.+.+++||+ .+++|
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~-~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVH 168 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQ-THSPLAFAARLSLTVQMIRLVANLHS---YGLVH 168 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTT-TSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhccc-ccchhHHHHHHHHHHHHHHHHHHHhh---cceEe
Confidence 11 1 237788888 6788887642 111 13456677888899999999999999 89999
Q ss_pred CCcCCCceEeCCCCCeEEeeccccccccCCCCCcceecccCCcccCcccccC--------CCCCcchhHHHHHHHHHHHH
Q 040242 484 RDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRT--------GKATTSTDVFGFGTLMLEVA 555 (662)
Q Consensus 484 ~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~t~ksDV~S~Gvvl~ell 555 (662)
+||+|+|++++++|.+.|+||+.....+..... ...+..|.+||.... -.++.+.|.|++|+++|.|+
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lW 244 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLW 244 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEEEEG----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCceeec----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHH
Confidence 999999999999999999999877765432111 234578999997643 24788999999999999999
Q ss_pred cCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCC
Q 040242 556 CGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFR 619 (662)
Q Consensus 556 tG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~R 619 (662)
||+.||......... +.....+. +.++.+..|+..+|+.||.+|
T Consensus 245 C~~lPf~~~~~~~~~-------------------~~~f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 245 CGRLPFGLSSPEADP-------------------EWDFSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HSS-STCCCGGGSTS-------------------GGGGTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HccCCCCCCCccccc-------------------cccchhcC-CcCHHHHHHHHHHccCCcccC
Confidence 999999855332111 00334556 788899999999999999988
No 417
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.80 E-value=2.1e-19 Score=174.51 Aligned_cols=140 Identities=19% Similarity=0.192 Sum_probs=108.4
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh--h-------HHH-----------------HHHHHHHhhcccccc
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ--G-------MKE-----------------FVAEITSMGRLRHRN 413 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~--~-------~~~-----------------f~~Ei~~l~~l~H~n 413 (662)
...||+|++|.||+|... +|+.||||+++..... . ... ...|++.+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 467999999999999996 8999999999654211 0 112 234999999998887
Q ss_pred ceeeeeeEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHh-HhcCCCCEEeCCcCCCceE
Q 040242 414 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYL-HEECDQRVVHRDVKPSNVL 492 (662)
Q Consensus 414 iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~ivH~Dlkp~NIl 492 (662)
+.....+.. ...++||||+++++|...+.. ...+++.+...++.|++.+|.|| |+ .+|+||||||+|||
T Consensus 81 v~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NIl 150 (190)
T cd05147 81 IPCPEPILL--KSHVLVMEFIGDDGWAAPRLK-----DAPLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNLL 150 (190)
T ss_pred CCCCcEEEe--cCCEEEEEEeCCCCCcchhhh-----cCCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEE
Confidence 644333222 223899999998877654321 24578889999999999999999 56 79999999999999
Q ss_pred eCCCCCeEEeecccccccc
Q 040242 493 IDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 493 l~~~~~~kL~DfGla~~~~ 511 (662)
++ ++.++|+|||++...+
T Consensus 151 i~-~~~v~LiDFG~a~~~~ 168 (190)
T cd05147 151 YH-DGKLYIIDVSQSVEHD 168 (190)
T ss_pred EE-CCcEEEEEccccccCC
Confidence 98 4789999999998543
No 418
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.80 E-value=7.8e-20 Score=179.99 Aligned_cols=170 Identities=12% Similarity=0.155 Sum_probs=131.1
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhh---HHH------HHHHHHHhhccccccceeeeeeEecc
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQG---MKE------FVAEITSMGRLRHRNLVQLHGWCRKQ 424 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~---~~~------f~~Ei~~l~~l~H~niv~l~~~~~~~ 424 (662)
.++|+..++||.|+||.||.... ++..+|||.+....... ... +.+|+..+.+++|++|..+..++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 57899999999999999999765 46689999996543222 122 67999999999999999998885533
Q ss_pred --------CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC
Q 040242 425 --------DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD 496 (662)
Q Consensus 425 --------~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~ 496 (662)
+..++||||++|.+|.++.. ++. ....+++++|..||+ .+++|||+||+||+++.+
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili~~~ 171 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIVSKN 171 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEEeCC
Confidence 35799999999999988741 111 245689999999999 899999999999999998
Q ss_pred CCeEEeeccccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHH
Q 040242 497 LNPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVA 555 (662)
Q Consensus 497 ~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ell 555 (662)
+ ++|+|||............ .+.....+..++|+|+||+.+..+.
T Consensus 172 g-i~liDfg~~~~~~e~~a~d-------------~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 172 G-LRIIDLSGKRCTAQRKAKD-------------RIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred C-EEEEECCCcccccchhhHH-------------HHHHHhHhcccccccceeEeehHHH
Confidence 8 9999999887653221110 1233334557899999999886653
No 419
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=4e-20 Score=207.23 Aligned_cols=248 Identities=23% Similarity=0.251 Sum_probs=180.4
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc-hhhHHHHHHHHHH--hhccccccceeeeeeEeccCeeeEEEe
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS-RQGMKEFVAEITS--MGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~-~~~~~~f~~Ei~~--l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
++...+.||+++|=+|.+|++. +|. |+||++-+.. .-..+.|.++++- ...++|||.+++.-+-..++..|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 5666889999999999999994 565 9999986654 3334444444433 455689999999988888888899999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccc--
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY-- 510 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~-- 510 (662)
|. .-+|.+.|. .+..|..-+..-|+.|++.||..+|. .+|+|||||.+|||++.-.-+.|+||.--+..
T Consensus 102 yv-khnLyDRlS-----TRPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYL 172 (1431)
T KOG1240|consen 102 YV-KHNLYDRLS-----TRPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYL 172 (1431)
T ss_pred HH-hhhhhhhhc-----cchHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccC
Confidence 99 458998883 25678888888899999999999999 99999999999999999999999999866532
Q ss_pred cCCCCCcce----ecccCCcccCcccccCC-----------CCCcchhHHHHHHHHHHHHc-CCCCCCcccchhhHHHHH
Q 040242 511 DHNINPQTT----HIVGTLGYLAPELTRTG-----------KATTSTDVFGFGTLMLEVAC-GRRPIEPQRTAMELVLVD 574 (662)
Q Consensus 511 ~~~~~~~~~----~~~gt~~y~aPE~~~~~-----------~~t~ksDV~S~Gvvl~ellt-G~~p~~~~~~~~~~~l~~ 574 (662)
.++.-...+ ......+|+|||.+... ..+++.||||+||++.||++ |++||.... |..
T Consensus 173 PeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQ------L~a 246 (1431)
T KOG1240|consen 173 PEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQ------LLA 246 (1431)
T ss_pred CCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHH------HHh
Confidence 221111111 12234689999977431 26789999999999999999 677776321 111
Q ss_pred HHHHHhhcCccccccCCC--CCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHhc
Q 040242 575 WVRELHSQGQITRAIDPT--LDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLLR 631 (662)
Q Consensus 575 ~~~~~~~~~~~~~~id~~--l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~~ 631 (662)
+ +.+. ..|+. +... +...+..+++.|++.||++|-++++.++.-.+
T Consensus 247 Y-----r~~~---~~~~e~~Le~I---ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 247 Y-----RSGN---ADDPEQLLEKI---EDVSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred H-----hccC---ccCHHHHHHhC---cCccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 1 1111 11111 0111 11257889999999999999999999986443
No 420
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.79 E-value=3.2e-19 Score=169.74 Aligned_cols=203 Identities=23% Similarity=0.347 Sum_probs=169.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcccc-ccceeeeeeEeccCeeeEEEec
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRH-RNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H-~niv~l~~~~~~~~~~~lV~E~ 433 (662)
..|...++||+|+||.+|.|....+|+.||||.-..... ..++.-|.++.+.|++ ..|..+.-+..++..-.+|||.
T Consensus 15 gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdL 92 (341)
T KOG1163|consen 15 GKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDL 92 (341)
T ss_pred cceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeeec
Confidence 568889999999999999999999999999998755433 2466778888888875 6677777788888888999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC---CCeEEeeccccccc
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD---LNPKLGDFGLARAY 510 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~---~~~kL~DfGla~~~ 510 (662)
. |.+|+++..-. ...++..+.+.++-|++.-++|+|. .+++||||||+|+|..-+ ..+.++||||++.+
T Consensus 93 L-GPsLEdLfnfC----~R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky 164 (341)
T KOG1163|consen 93 L-GPSLEDLFNFC----SRRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY 164 (341)
T ss_pred c-CccHHHHHHHH----hhhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhhh
Confidence 9 99999998544 4568889999999999999999999 899999999999998644 45899999999987
Q ss_pred cCCCCC------cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccch
Q 040242 511 DHNINP------QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTA 567 (662)
Q Consensus 511 ~~~~~~------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~ 567 (662)
...... ......||.+|.+=....+.+-+...|+-|+|.+|..+--|..||.+-...
T Consensus 165 ~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~ 227 (341)
T KOG1163|consen 165 RDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA 227 (341)
T ss_pred ccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence 543221 223457999998877776667788999999999999999999999876543
No 421
>cd06901 lectin_VIP36_VIPL VIP36 and VIPL type 1 transmembrane proteins, lectin domain. The vesicular integral protein of 36 kDa (VIP36) is a type 1 transmembrane protein of the mammalian early secretory pathway that acts as a cargo receptor transporting high mannose type glycoproteins between the Golgi and the endoplasmic reticulum (ER). Lectins of the early secretory pathway are involved in the selective transport of newly synthesized glycoproteins from the ER to the ER-Golgi intermediate compartment (ERGIC). The most prominent cycling lectin is the mannose-binding type1 membrane protein ERGIC-53, which functions as a cargo receptor to facilitate export of glycoproteins from the ER. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat six-stranded beta-sheet referred to as the "back face". This domain homodimerizes so that adjacent back sheets form a contiguous 12-stranded she
Probab=99.79 E-value=5.8e-18 Score=169.09 Aligned_cols=200 Identities=16% Similarity=0.135 Sum_probs=129.2
Q ss_pred CCCeeEecceeeeCCCeEEecCCCCCeeEEEEcCCceeecccccccccCCCCCceeeeeEEEEEEEEecCCCCCCCCcee
Q 040242 30 QANLSLDGTAFVRKDGILAVSNDQGRILGHAFYPSPLRFKQLSKYNINNNTISHTALTFSTNFVFSIVPKYPQLGGHGLA 109 (662)
Q Consensus 30 ~~~~~l~G~a~~~~~~~~~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGla 109 (662)
..++.+.|+|.+. ++.|+||++.+++.|++||+.|+++- +|+|+|+|+|.+.+...+|||||
T Consensus 19 i~~w~~~G~a~v~-~~~IrLTp~~~~~~G~~w~~~p~~~~-----------------~F~~~f~F~I~~~~~~~~GdGlA 80 (248)
T cd06901 19 MPLWDFLGSTMVT-SQYIRLTPDHQSKQGSIWNRVPCYLR-----------------DWEMHVHFKVHGSGKNLFGDGFA 80 (248)
T ss_pred CCCEEEcceEEEc-CCeEEECCCCCCCEEEEeccCCccCC-----------------CEEEEEEEEEeCCCCCCCCCEEE
Confidence 4689999999987 67999999998899999999999976 49999999999876667899999
Q ss_pred EEEccCCCCCCCCcccccCCCCCCCCCCCCCcEEEEEeeccCCCCC-CCCCCCeeEEecCCCcccccccccccccCCCCC
Q 040242 110 FVLMSRKQPPSCLANQYLGLPNDTSNAKFSTRILAVEFDAVQNLEL-QDINDNHVGIDISSLISNISEPAAYYFSKGSNI 188 (662)
Q Consensus 110 F~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~-~d~~~~Hvgid~ns~~s~~~~~~~~~~~~~~~~ 188 (662)
|+++.... ..|..+|-.+.- .=+||-|||+.|.+- .....+-|.+-+|.- +..+....|.+...
T Consensus 81 fw~t~~~~----~~G~~fG~~~~f-------~Gl~I~~Dt~~n~~~~~~~~~P~i~~~~NDG----t~~yd~~~Dg~~~~ 145 (248)
T cd06901 81 IWYTKERM----QPGPVFGSKDNF-------HGLAIFFDTYSNQNGEHEHVHPYISAMVNNG----SLSYDHDRDGTHTE 145 (248)
T ss_pred EEEEcCCC----ccCcccccCCCC-------ceEEEEEECCCCCCCcccCCCceEEEEEcCC----CeeecccCCCchhh
Confidence 99998642 334445543321 118999999998531 001122232222221 11111111111111
Q ss_pred CCCCcceee-cCCCcEEEEEEEeCCCcEEEEEEccCCCCCCCCCeeeeeccccc-ccccceEEeeeccCCcccceeEEec
Q 040242 189 NDDNISVVL-KSGDPIQAWIDYNSQEMLINVTISPLGIPKPHRPLISYPIDLAT-VLDEYMYVGFSASTGLLTAFHNVHG 266 (662)
Q Consensus 189 ~~~~~~~~l-~~g~~~~~~I~Y~~~~~~l~V~~~~~~~~~~~~~~ls~~vdL~~-~l~~~~~vGFsastG~~~~~~~i~s 266 (662)
-..+. ... ..+...+++|.|... .+.|.++..+... .....+... .||...|+||||+||.+.+.|+|++
T Consensus 146 ~~~C~-~~~rn~~~~t~~rI~Y~~~--~l~v~vd~~~~~~-----w~~Cf~~~~v~LP~~~yfGiSA~Tg~~sd~hdIls 217 (248)
T cd06901 146 LAGCS-APFRNKDHDTFVAIRYSKG--RLTVMTDIDGKNE-----WKECFDVTGVRLPTGYYFGASAATGDLSDNHDIIS 217 (248)
T ss_pred cCcee-eeccCCCCCeEEEEEEECC--eEEEEEecCCCCc-----eeeeEEeCCeecCCCCEEEEEecCCCCCCcEEEEE
Confidence 11111 122 345667899999964 4666665322111 112233333 3577799999999999999999998
Q ss_pred ceee
Q 040242 267 WSFK 270 (662)
Q Consensus 267 W~f~ 270 (662)
-.+.
T Consensus 218 v~~~ 221 (248)
T cd06901 218 MKLY 221 (248)
T ss_pred EEEe
Confidence 6654
No 422
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.78 E-value=7.7e-19 Score=174.33 Aligned_cols=199 Identities=22% Similarity=0.294 Sum_probs=169.3
Q ss_pred CCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeeeEEEecc
Q 040242 356 GFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
.|...++||+|.||.++.|+..-+++.||||.-...+ ...++..|....+.| ..++|.+.+-+..++.+-.||+|..
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL 106 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL 106 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh
Confidence 4778899999999999999999999999999765443 235677788888777 4799999988888888889999999
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCC-----CeEEeecccccc
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADL-----NPKLGDFGLARA 509 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~-----~~kL~DfGla~~ 509 (662)
|.||+++..-+ ...++.++...+|+|++.-++|+|+ +.+|.|||||+|+||..-+ .+.|.|||+|+.
T Consensus 107 -GPSLEDLFD~C----gR~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~ 178 (449)
T KOG1165|consen 107 -GPSLEDLFDLC----GRRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKE 178 (449)
T ss_pred -CcCHHHHHHHh----cCcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchhh
Confidence 99999987533 4568899999999999999999999 8999999999999996543 389999999998
Q ss_pred ccCCCCC------cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcc
Q 040242 510 YDHNINP------QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQ 564 (662)
Q Consensus 510 ~~~~~~~------~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~ 564 (662)
+...... ......||.+||+=....+.+-+...|.-|+|-+++..+-|..||.+-
T Consensus 179 YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 179 YRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred hcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 7654322 233457999999999888889999999999999999999999999754
No 423
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.77 E-value=3.8e-18 Score=166.08 Aligned_cols=141 Identities=21% Similarity=0.220 Sum_probs=111.1
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh--------------------------hHHHHHHHHHHhhcccccc
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ--------------------------GMKEFVAEITSMGRLRHRN 413 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~--------------------------~~~~f~~Ei~~l~~l~H~n 413 (662)
...||+|++|.||+|.+. +|+.||||++...... ....+..|...+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 467999999999999986 8999999998764211 0122357899999999998
Q ss_pred ceeeeeeEeccCeeeEEEeccCCCCcchh-cccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceE
Q 040242 414 LVQLHGWCRKQDELLLVYDYVPNGSLDKL-LFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVL 492 (662)
Q Consensus 414 iv~l~~~~~~~~~~~lV~E~~~~gsL~~~-l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl 492 (662)
+.....+... ..++||||++++++... +. ...++..+...++.|++.++.+||+. .+|+||||||+||+
T Consensus 81 i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~------~~~~~~~~~~~i~~~l~~~l~~lH~~--~givHrDlkP~NIl 150 (190)
T cd05145 81 VPVPEPILLK--KNVLVMEFIGDDGSPAPRLK------DVPLEEEEAEELYEQVVEQMRRLYQE--AGLVHGDLSEYNIL 150 (190)
T ss_pred CCCceEEEec--CCEEEEEEecCCCchhhhhh------hccCCHHHHHHHHHHHHHHHHHHHHh--CCEecCCCChhhEE
Confidence 7554443332 24899999988865443 32 23467788899999999999999984 69999999999999
Q ss_pred eCCCCCeEEeeccccccccC
Q 040242 493 IDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 493 l~~~~~~kL~DfGla~~~~~ 512 (662)
++ ++.++|+|||++...++
T Consensus 151 l~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 151 YH-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred EE-CCCEEEEEcccceecCC
Confidence 99 88999999999987654
No 424
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=8.3e-18 Score=162.21 Aligned_cols=186 Identities=17% Similarity=0.104 Sum_probs=139.5
Q ss_pred cccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhh----HHHHHHHHHHhhccc-cccceeeeeeEeccCeeeEEEe
Q 040242 358 REKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQG----MKEFVAEITSMGRLR-HRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 358 ~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~----~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lV~E 432 (662)
.....|++|+||+||.+.. .+.+++.+.+.....-. ...|.+|+++|++|. |+++.+++++ +..+++||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme 78 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS 78 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence 3467899999999997665 56788878776554311 225789999999995 5889999887 34699999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCc-CCCceEeCCCCCeEEeecccccccc
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDV-KPSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dl-kp~NIll~~~~~~kL~DfGla~~~~ 511 (662)
|++|.+|...+.. . ...++.|++++|.++|+ .+|+|||| ||.|||++.++.++|+|||++....
T Consensus 79 yI~G~~L~~~~~~------~------~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~ 143 (218)
T PRK12274 79 YLAGAAMYQRPPR------G------DLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN 143 (218)
T ss_pred eecCccHHhhhhh------h------hHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence 9999998654311 1 13467899999999999 89999999 7999999999999999999998654
Q ss_pred CCCCC----c--------ceecccCCcccCcccccCC-CCC-cchhHHHHHHHHHHHHcCCCCCCcc
Q 040242 512 HNINP----Q--------TTHIVGTLGYLAPELTRTG-KAT-TSTDVFGFGTLMLEVACGRRPIEPQ 564 (662)
Q Consensus 512 ~~~~~----~--------~~~~~gt~~y~aPE~~~~~-~~t-~ksDV~S~Gvvl~elltG~~p~~~~ 564 (662)
..... . ......++.|++|+...-- ..+ ...+.++-|+-+|.++|++.+...+
T Consensus 144 ~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 144 PRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 43210 0 0112357788888744321 233 5679999999999999999887544
No 425
>PRK10345 hypothetical protein; Provisional
Probab=99.74 E-value=1.9e-17 Score=162.47 Aligned_cols=136 Identities=24% Similarity=0.302 Sum_probs=107.8
Q ss_pred cccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcc-----ccccceeeeeeEeccC---e-ee
Q 040242 358 REKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRL-----RHRNLVQLHGWCRKQD---E-LL 428 (662)
Q Consensus 358 ~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-----~H~niv~l~~~~~~~~---~-~~ 428 (662)
...++||+|++|.||. ++.++.. +||++........+++.+|+.+++++ .||||++++|+++.+. . ..
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~ 81 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYD 81 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEE
Confidence 4468899999999996 6666665 69988765455567899999999999 5799999999998874 3 34
Q ss_pred EEEec--cCCCCcchhcccccccccccccHHHHHHHHHHHHHHH-HHhHhcCCCCEEeCCcCCCceEeCC----CCCeEE
Q 040242 429 LVYDY--VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQAL-LYLHEECDQRVVHRDVKPSNVLIDA----DLNPKL 501 (662)
Q Consensus 429 lV~E~--~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L-~yLH~~~~~~ivH~Dlkp~NIll~~----~~~~kL 501 (662)
+|+|| +++++|.+++.+. .+++. ..++.+++.++ .|||+ .+|+||||||+|||++. +..++|
T Consensus 82 ~I~e~~G~~~~tL~~~l~~~------~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~L 150 (210)
T PRK10345 82 VIADFDGKPSITLTEFAEQC------RYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPVV 150 (210)
T ss_pred EEecCCCCcchhHHHHHHcc------cccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEEE
Confidence 78999 6689999999432 24444 35577788777 99999 89999999999999974 347999
Q ss_pred eecccc
Q 040242 502 GDFGLA 507 (662)
Q Consensus 502 ~DfGla 507 (662)
+|++.+
T Consensus 151 iDg~G~ 156 (210)
T PRK10345 151 CDNIGE 156 (210)
T ss_pred EECCCC
Confidence 995433
No 426
>cd06902 lectin_ERGIC-53_ERGL ERGIC-53 and ERGL type 1 transmembrane proteins, N-terminal lectin domain. ERGIC-53 and ERGL, N-terminal carbohydrate recognition domain. ERGIC-53 and ERGL are eukaryotic mannose-binding type 1 transmembrane proteins of the early secretory pathway that transport newly synthesized glycoproteins from the endoplasmic reticulum (ER) to the ER-Golgi intermediate compartment (ERGIC). ERGIC-53 and ERGL have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. ERGIC-53 functions as a 'cargo receptor' to facilitate the export of glycoproteins with different characteristics from the ER, while the ERGIC-53-like protein (ERGL) which may act as a regulator of ERGIC-53. In mammals, ERGIC-53 forms a complex with MCFD2 (multi-coagulation factor deficiency 2) which then recruits blood coagulation factors V and VIII. Mutations in either MCFD2 or ERGIC-53 cause a mild form of inherite
Probab=99.74 E-value=2.7e-16 Score=155.13 Aligned_cols=199 Identities=17% Similarity=0.180 Sum_probs=135.7
Q ss_pred CCeeEecceeeeCCCeEEecCCCCCeeEEEEcCCceeecccccccccCCCCCceeeeeEEEEEEEEecCCCCCCCCceeE
Q 040242 31 ANLSLDGTAFVRKDGILAVSNDQGRILGHAFYPSPLRFKQLSKYNINNNTISHTALTFSTNFVFSIVPKYPQLGGHGLAF 110 (662)
Q Consensus 31 ~~~~l~G~a~~~~~~~~~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF 110 (662)
.++.+.|+|.+. ++.|+||++.+++.|.+|.+.|++.- +|+.+|+|+|.... ..+||||||
T Consensus 22 ~~W~~~G~t~~~-~~~IrLTp~~~~~~G~iw~~~~~~~~-----------------~w~ie~~Fri~g~~-~~~gdG~a~ 82 (225)
T cd06902 22 PFWSHGGDAIAS-LEQVRLTPSLRSKKGSVWTKNPFSFE-----------------NWEVEVTFRVTGRG-RIGADGLAI 82 (225)
T ss_pred CceEecccEEec-CCEEEECCCCCCCEEEEeeCCCcCCC-----------------CEEEEEEEEEecCC-CCCCCEEEE
Confidence 589999999886 78999999999999999999999844 49999999998764 357899999
Q ss_pred EEccCCCCCCCCcccccCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCeeEEecCCCcccccccccccccCCCCCCC
Q 040242 111 VLMSRKQPPSCLANQYLGLPNDTSNAKFSTRILAVEFDAVQNLELQDINDNHVGIDISSLISNISEPAAYYFSKGSNIND 190 (662)
Q Consensus 111 ~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~~~~~~~~ 190 (662)
+++.... ..|+.+|..+.- .=+||.|||+.|.+ ..+...|-+-+|.-. .......|.....-.
T Consensus 83 W~t~~~~----~~G~~~G~~~~f-------~Gl~I~~Dt~~n~~--~~~~p~i~~~~NDGt----~~yd~~~D~~~~~~~ 145 (225)
T cd06902 83 WYTKERG----EEGPVFGSSDKW-------NGVGIFFDSFDNDG--KKNNPAILVVGNDGT----KSYDHQNDGLTQALG 145 (225)
T ss_pred EEECCCC----CCCCccCCCCcc-------cEEEEEEECCCCCC--CCCCcEEEEEECCCC----eeccccCCCcccccc
Confidence 9997642 245566664332 12899999998853 233456655444321 111111111111111
Q ss_pred CCcceee-cCCCcEEEEEEEeCCCcEEEEEEccCCCCCCCCCeeeeecccccc-cccceEEeeeccCCcccceeEEecce
Q 040242 191 DNISVVL-KSGDPIQAWIDYNSQEMLINVTISPLGIPKPHRPLISYPIDLATV-LDEYMYVGFSASTGLLTAFHNVHGWS 268 (662)
Q Consensus 191 ~~~~~~l-~~g~~~~~~I~Y~~~~~~l~V~~~~~~~~~~~~~~ls~~vdL~~~-l~~~~~vGFsastG~~~~~~~i~sW~ 268 (662)
.+. ... +...+.+++|.|.. ..|.|.++... .+........+++..+ ||...|+||||+||.+.+.|+|++|.
T Consensus 146 ~C~-~~~rn~~~p~~~rI~Y~~--~~l~V~~d~~~--~~~~~~~~~Cf~~~~v~LP~~~yfGiSA~Tg~l~d~hDIls~~ 220 (225)
T cd06902 146 SCL-RDFRNKPYPVRAKITYYQ--NVLTVSINNGF--TPNKDDYELCTRVENMVLPPNGYFGVSAATGGLADDHDVLSFL 220 (225)
T ss_pred eEE-EeccCCCCCeEEEEEEEC--CeEEEEEeCCc--CCCCCcccEEEecCCeeCCCCCEEEEEecCCCCCCcEeEEEEE
Confidence 111 122 23578999999997 46888886322 2222223445555553 68889999999999999999999999
Q ss_pred ee
Q 040242 269 FK 270 (662)
Q Consensus 269 f~ 270 (662)
+.
T Consensus 221 ~~ 222 (225)
T cd06902 221 TF 222 (225)
T ss_pred Ee
Confidence 86
No 427
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.69 E-value=1.8e-16 Score=181.82 Aligned_cols=195 Identities=22% Similarity=0.261 Sum_probs=156.2
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccc---cccceeeeeeEeccCeeeE
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLR---HRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~---H~niv~l~~~~~~~~~~~l 429 (662)
..+.|.+.+.||+|+||+||+|...+ |+.||+|+-....... |.--.+++.||+ -+-|+++..++.-.+..+|
T Consensus 696 ~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~l 771 (974)
T KOG1166|consen 696 GGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQNASVL 771 (974)
T ss_pred cceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCCccee
Confidence 34678889999999999999999965 9999999876654332 222223333443 2445556666666778899
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCC-------CCCeEEe
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDA-------DLNPKLG 502 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~-------~~~~kL~ 502 (662)
|+||.+.|+|.+++.. .+.++|...+.++.|++..+..||. .+|||+||||+|+||.. +.-++|+
T Consensus 772 v~ey~~~Gtlld~~N~-----~~~m~e~lv~~~~~qml~ive~lH~---~~IIHgDiKPDNfll~~~~~~~~~~~~l~lI 843 (974)
T KOG1166|consen 772 VSEYSPYGTLLDLINT-----NKVMDEYLVMFFSCQMLRIVEHLHA---MGIIHGDIKPDNFLLRREICADSDSKGLYLI 843 (974)
T ss_pred eeeccccccHHHhhcc-----CCCCCchhhhHHHHHHHHHHHHHHh---cceecccCCcceeEeecccCCCCcccceEEE
Confidence 9999999999999962 5679999999999999999999999 89999999999999942 3459999
Q ss_pred eccccccccCCC-CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCC
Q 040242 503 DFGLARAYDHNI-NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRR 559 (662)
Q Consensus 503 DfGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~ 559 (662)
|||.+..+.--. .......++|-++-.+|+..+..++.+.|.|.++.+++-|+.|+.
T Consensus 844 DfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 844 DFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred ecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 999887543221 124455688999999999999999999999999999999999975
No 428
>smart00090 RIO RIO-like kinase.
Probab=99.69 E-value=2.3e-16 Score=158.44 Aligned_cols=143 Identities=16% Similarity=0.209 Sum_probs=111.1
Q ss_pred CCcccceeeeeCceEEEEEE-eCCCCcEEEEEEeeccchh------------------------hHHHHHHHHHHhhccc
Q 040242 356 GFREKNLVGSGGFGKVYRGV-IPSTGLEVAIKRVAHNSRQ------------------------GMKEFVAEITSMGRLR 410 (662)
Q Consensus 356 ~f~~~~~LG~G~~g~Vy~~~-~~~~g~~vavK~~~~~~~~------------------------~~~~f~~Ei~~l~~l~ 410 (662)
.|.+.+.||+|++|.||+|. ...+|+.||||++...... ....+..|+..+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47778999999999999999 5568999999998653210 1123568999999997
Q ss_pred ccc--ceeeeeeEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCC-EEeCCcC
Q 040242 411 HRN--LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQR-VVHRDVK 487 (662)
Q Consensus 411 H~n--iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~-ivH~Dlk 487 (662)
+.. +.+++++ ...++||||+++++|...+.. ...+...+...++.|++.+|.+||+ .+ ++|||||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~Dik 176 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK-----DVEPEEEEEFELYDDILEEMRKLYK---EGELVHGDLS 176 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccc-----cCCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCCCC
Confidence 633 3344443 235899999999888776522 1234455667899999999999999 78 9999999
Q ss_pred CCceEeCCCCCeEEeecccccccc
Q 040242 488 PSNVLIDADLNPKLGDFGLARAYD 511 (662)
Q Consensus 488 p~NIll~~~~~~kL~DfGla~~~~ 511 (662)
|+||+++ ++.++|+|||++....
T Consensus 177 p~NIli~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 177 EYNILVH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred hhhEEEE-CCCEEEEEChhhhccC
Confidence 9999999 8899999999988544
No 429
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.67 E-value=3e-16 Score=155.24 Aligned_cols=134 Identities=21% Similarity=0.323 Sum_probs=113.6
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccch--------hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR--------QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~--------~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
+.||+|++|.||+|.. .|..+++|+...... .....+.+|+.++..++|+++.....++...+..+++||
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEE
Confidence 5799999999999988 567899997653221 123467889999999999999888888777788899999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
|+++++|.+++... .+ .+..++.+++.+|.+||+ .+++|+|++|.||+++ ++.++|+|||++..
T Consensus 80 ~~~G~~L~~~~~~~--------~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 80 YIEGEPLKDLINSN--------GM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred EeCCcCHHHHHHhc--------cH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999988432 12 788999999999999999 8999999999999999 78899999998875
No 430
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.67 E-value=4.8e-16 Score=175.27 Aligned_cols=139 Identities=21% Similarity=0.279 Sum_probs=113.4
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeecc--------chhhHHHHHHHHHHhhccccccceeeeeeEecc
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN--------SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQ 424 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~--------~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~ 424 (662)
....|...++||+|+||+||+|.+... .+++|+.... .....+.+.+|++++.+++|++++....++...
T Consensus 331 ~~~~~~~~~~iG~G~~g~Vy~~~~~~~--~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~ 408 (535)
T PRK09605 331 VKRRKIPDHLIGKGAEADIKKGEYLGR--DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDP 408 (535)
T ss_pred cccccCccceeccCCcEEEEEEeecCc--cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeC
Confidence 345556789999999999999988443 3444432211 112235688999999999999999888888777
Q ss_pred CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 425 DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 425 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
...++||||+++++|.+++. .+..++.+++++|.|||+ .+++||||||+||++ .++.++|+||
T Consensus 409 ~~~~lv~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDF 471 (535)
T PRK09605 409 EEKTIVMEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDF 471 (535)
T ss_pred CCCEEEEEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeC
Confidence 78899999999999998873 356789999999999999 899999999999999 6789999999
Q ss_pred cccccc
Q 040242 505 GLARAY 510 (662)
Q Consensus 505 Gla~~~ 510 (662)
|+++..
T Consensus 472 Gla~~~ 477 (535)
T PRK09605 472 GLGKYS 477 (535)
T ss_pred cccccC
Confidence 999863
No 431
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.67 E-value=2.3e-16 Score=160.09 Aligned_cols=196 Identities=21% Similarity=0.289 Sum_probs=138.4
Q ss_pred ccccceeeeeeEec---------------------------cCeeeEEEeccCCCCcchhcccccccccccccHHHHHHH
Q 040242 410 RHRNLVQLHGWCRK---------------------------QDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKI 462 (662)
Q Consensus 410 ~H~niv~l~~~~~~---------------------------~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i 462 (662)
+|||||++.+++.+ ...+|+||..+ .-+|..++-. ...+...+.-+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~------~~~s~r~~~~~ 346 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWT------RHRSYRTGRVI 346 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhc------CCCchHHHHHH
Confidence 59999998876532 23578999988 4589888853 33556667788
Q ss_pred HHHHHHHHHHhHhcCCCCEEeCCcCCCceEeC--CCC--CeEEeeccccccccCC-----CCCcceecccCCcccCcccc
Q 040242 463 LIGVAQALLYLHEECDQRVVHRDVKPSNVLID--ADL--NPKLGDFGLARAYDHN-----INPQTTHIVGTLGYLAPELT 533 (662)
Q Consensus 463 ~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~--~~~--~~kL~DfGla~~~~~~-----~~~~~~~~~gt~~y~aPE~~ 533 (662)
+.|+++|+.|||+ ++|.|||+|++|||+. +|. .+.|+|||++-.-+.. ........-|...-||||+.
T Consensus 347 laQlLEav~hL~~---hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ 423 (598)
T KOG4158|consen 347 LAQLLEAVTHLHK---HGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIA 423 (598)
T ss_pred HHHHHHHHHHHHH---ccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhh
Confidence 9999999999999 8999999999999983 343 3788999988654331 11122234577889999987
Q ss_pred cCCC------CCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHH
Q 040242 534 RTGK------ATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTL 607 (662)
Q Consensus 534 ~~~~------~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l 607 (662)
.... -..|+|.|+.|.+.||++....||....+. ...... | .+ ..+...+...+..+.+|
T Consensus 424 ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem-~L~~r~-----Y-----qe---~qLPalp~~vpp~~rql 489 (598)
T KOG4158|consen 424 TAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM-LLDTRT-----Y-----QE---SQLPALPSRVPPVARQL 489 (598)
T ss_pred hcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh-eechhh-----h-----hh---hhCCCCcccCChHHHHH
Confidence 5421 246899999999999999999999863221 111111 1 11 12223344455667888
Q ss_pred HHHccCCCCCCCCCHHHHHHHH
Q 040242 608 GLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 608 ~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
+...|++||++||+..-....|
T Consensus 490 V~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 490 VFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHHHhcCCccccCCccHHHhHH
Confidence 8899999999999976555544
No 432
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.67 E-value=1.6e-17 Score=175.33 Aligned_cols=123 Identities=28% Similarity=0.470 Sum_probs=109.1
Q ss_pred eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecc
Q 040242 426 ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFG 505 (662)
Q Consensus 426 ~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfG 505 (662)
.+++.|++|...+|.++|.+.+. ....+|.....++.|++.|+.| ++.+|+|+||.||+...+..+||+|||
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~--~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~kIgDFg 401 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRT--GEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLKIGDFG 401 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCc--ccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhhhhhhh
Confidence 57999999999999999976543 4557788899999999999999 478999999999999999999999999
Q ss_pred ccccccCCC-----CCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHc
Q 040242 506 LARAYDHNI-----NPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVAC 556 (662)
Q Consensus 506 la~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ellt 556 (662)
+........ ....+...||..||+||.+.+..++.|+|||+||++|+||+.
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHH
Confidence 998776654 234566789999999999999999999999999999999987
No 433
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.67 E-value=6.6e-16 Score=151.35 Aligned_cols=145 Identities=19% Similarity=0.233 Sum_probs=112.5
Q ss_pred HHHHhccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch----------------------hhHHHHHHHHHHh
Q 040242 349 ELYSATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR----------------------QGMKEFVAEITSM 406 (662)
Q Consensus 349 el~~at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~----------------------~~~~~f~~Ei~~l 406 (662)
++...-.-|...+.||+|++|.||++... +|+.||||++..... .....+..|+.++
T Consensus 9 ~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 9 TLVKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 44444444777899999999999999984 789999998754320 0112367788899
Q ss_pred hcccccc--ceeeeeeEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeC
Q 040242 407 GRLRHRN--LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHR 484 (662)
Q Consensus 407 ~~l~H~n--iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~ 484 (662)
..+.|++ +.+.++. ...++||||+++++|..+... .....++.++++++.++|+ .+++||
T Consensus 88 ~~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh~---~gi~H~ 149 (198)
T cd05144 88 KALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAYK---HGIIHG 149 (198)
T ss_pred HHHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHHH---CCCCcC
Confidence 9998874 4445443 345899999999999876521 2345688999999999999 899999
Q ss_pred CcCCCceEeCCCCCeEEeeccccccccC
Q 040242 485 DVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 485 Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
||||+||++++++.++|+|||++.....
T Consensus 150 Dl~p~Nill~~~~~~~liDfg~~~~~~~ 177 (198)
T cd05144 150 DLSEFNILVDDDEKIYIIDWPQMVSTDH 177 (198)
T ss_pred CCCcccEEEcCCCcEEEEECCccccCCC
Confidence 9999999999999999999999975543
No 434
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.66 E-value=1.6e-17 Score=178.56 Aligned_cols=226 Identities=23% Similarity=0.276 Sum_probs=171.0
Q ss_pred eeeeeCceEEEEEEe---CCCCcEEEEEEeeccchhh--HHHHHHHHHHhhccc-cccceeeeeeEeccCeeeEEEeccC
Q 040242 362 LVGSGGFGKVYRGVI---PSTGLEVAIKRVAHNSRQG--MKEFVAEITSMGRLR-HRNLVQLHGWCRKQDELLLVYDYVP 435 (662)
Q Consensus 362 ~LG~G~~g~Vy~~~~---~~~g~~vavK~~~~~~~~~--~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lV~E~~~ 435 (662)
.+|+|.||.|++..- .+.|..+|+|.+.+..... ......|..++..++ ||.+|++.-.++.+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 378999999885432 3456778888876542111 114456777888886 9999999999999999999999999
Q ss_pred CCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCC
Q 040242 436 NGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNIN 515 (662)
Q Consensus 436 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~ 515 (662)
+|.|...+... ..............++-++.++|+ .+++|||+|++||+++.+|.+++.|||+.+..-....
T Consensus 81 gg~lft~l~~~-----~~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~ 152 (612)
T KOG0603|consen 81 GGDLFTRLSKE-----VMFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI 152 (612)
T ss_pred cchhhhccccC-----CchHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhHhhhh
Confidence 99999988554 234444455566778899999999 8999999999999999999999999999986433211
Q ss_pred CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCC
Q 040242 516 PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDY 595 (662)
Q Consensus 516 ~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~ 595 (662)
.+||..|||||+.+ ......|.||||++++||+||-.||... . +..... .. -.
T Consensus 153 -----~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~----~------~~~Il~---------~~-~~ 205 (612)
T KOG0603|consen 153 -----ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD----T------MKRILK---------AE-LE 205 (612)
T ss_pred -----cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH----H------HHHHhh---------hc-cC
Confidence 18999999999998 4577899999999999999999999861 0 000000 00 12
Q ss_pred CCHHHHHHHHHHHHHccCCCCCCCCCH
Q 040242 596 FDPQEAELVLTLGLLCCDPHPDFRPST 622 (662)
Q Consensus 596 ~~~~~~~~l~~l~~~Cl~~dP~~RPt~ 622 (662)
.+.+....+..++..+...+|..|--.
T Consensus 206 ~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 206 MPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred CchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 344555666777778888888888654
No 435
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.66 E-value=6.6e-16 Score=151.35 Aligned_cols=130 Identities=24% Similarity=0.351 Sum_probs=107.5
Q ss_pred eeeeeCceEEEEEEeCCCCcEEEEEEeeccc--------hhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEec
Q 040242 362 LVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS--------RQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 362 ~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~--------~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~ 433 (662)
.||+|++|.||+|.. .+..|++|...... ....+++.+|++++..++|+++.....++...+..++||||
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 78 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEY 78 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEE
Confidence 489999999999996 56789999864321 11235678899999999998876666666666778999999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
+++++|.+++.... . .++.+++.+|.+||+ .+++|+|++|.||+++ ++.+++.|||+++.
T Consensus 79 ~~g~~l~~~~~~~~------~------~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 79 IEGKPLKDVIEEGN------D------ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ECCccHHHHHhhcH------H------HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999998874321 0 789999999999999 8999999999999999 88999999998875
No 436
>cd06903 lectin_EMP46_EMP47 EMP46 and EMP47 type 1 transmembrane proteins, N-terminal lectin domain. EMP46 and EMP47, N-terminal carbohydrate recognition domain. EMP46 and EMP47 are fungal type-I transmembrane proteins that cycle between the endoplasmic reticulum and the golgi apparatus and are thought to function as cargo receptors that transport newly synthesized glycoproteins. EMP47 is a receptor for EMP46 responsible for the selective transport of EMP46 by forming hetero-oligomerization between the two proteins. EMP46 and EMP47 have an N-terminal lectin-like carbohydrate recognition domain (represented by this alignment model) as well as a C-terminal transmembrane domain. EMP46 and EMP47 are 45% sequence-identical to one another and have sequence homology to a class of intracellular lectins defined by ERGIC-53 and VIP36. L-type lectins have a dome-shaped beta-barrel carbohydrate recognition domain with a curved seven-stranded beta-sheet referred to as the "front face" and a flat s
Probab=99.58 E-value=9.2e-14 Score=135.95 Aligned_cols=188 Identities=16% Similarity=0.163 Sum_probs=124.6
Q ss_pred CCeeEecceeeeCCCeEEecCCCCCeeEEEEcCCceeecccccccccCCCCCceeeeeEEEEEEEEecCCCCCCCCceeE
Q 040242 31 ANLSLDGTAFVRKDGILAVSNDQGRILGHAFYPSPLRFKQLSKYNINNNTISHTALTFSTNFVFSIVPKYPQLGGHGLAF 110 (662)
Q Consensus 31 ~~~~l~G~a~~~~~~~~~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF 110 (662)
.++.+.|+|.+. ++.|+||++ +++.|.+|-+.|+++. + +|+.+|+|+|.... ..+||||||
T Consensus 21 ~~W~~~G~t~v~-~~~IrLTp~-~s~~G~iWs~~pl~~~---------~-------~w~ie~~Fri~G~~-~~~gdGla~ 81 (215)
T cd06903 21 PNWQTSGNPKLE-SGRIILTPP-GNQRGSLWLKKPLSLK---------D-------EWTIEWTFRSTGPE-GRSGGGLNF 81 (215)
T ss_pred CCeEEcCcEEee-CCeEEECCC-CCceEeEeeCCcCCCC---------C-------CEEEEEEEEecccC-CcCCCEEEE
Confidence 589999999987 789999999 9999999999999876 1 39999999998764 368999999
Q ss_pred EEccCCCCCCCCcc-cccCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCeeEEecCCCcccccccccccccCCCCCC
Q 040242 111 VLMSRKQPPSCLAN-QYLGLPNDTSNAKFSTRILAVEFDAVQNLELQDINDNHVGIDISSLISNISEPAAYYFSKGSNIN 189 (662)
Q Consensus 111 ~l~~~~~~~~~~~g-~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~~~~~~~ 189 (662)
.++...... .| ..+|-.+.- + =+||.|||+.|. . ..|-+-+|. .+.......| +...-
T Consensus 82 W~t~~~~~~---~g~~~fG~~~~f---~----Gl~I~~Dt~~n~---~---p~i~~~~ND----Gt~~yd~~~d-~~~~~ 140 (215)
T cd06903 82 WLVKDGNAD---VGTSSIYGPSKF---D----GLQLLIDNNGGS---G---GSLRGFLND----GSKDYKNEDV-DSLAF 140 (215)
T ss_pred EEECCCccc---CCccccCCCCCC---c----EEEEEEECCCCC---C---ceEEEEECC----CCeeccccCC-ccccc
Confidence 999764211 12 233332221 1 179999999873 1 233332222 1122221122 11111
Q ss_pred CCCcceeecCCCcEEEEEEEeCCCcEEEEEEccCCCCCCCCCeeeeecccccc-cc-cceEEeeeccCCcccceeEEecc
Q 040242 190 DDNISVVLKSGDPIQAWIDYNSQEMLINVTISPLGIPKPHRPLISYPIDLATV-LD-EYMYVGFSASTGLLTAFHNVHGW 267 (662)
Q Consensus 190 ~~~~~~~l~~g~~~~~~I~Y~~~~~~l~V~~~~~~~~~~~~~~ls~~vdL~~~-l~-~~~~vGFsastG~~~~~~~i~sW 267 (662)
..+.---.+.+.+.+++|.|......|.|.++. +.+ .+...+ || .-.|+||||+||...+.|+|++-
T Consensus 141 g~C~~~~rn~~~p~~iri~Y~~~~~~l~v~vd~-------~~C----f~~~~v~lP~~~y~fGiSAaTg~~~d~hdIl~~ 209 (215)
T cd06903 141 GSCLFAYQDSGVPSTIRLSYDALNSLFKVQVDN-------RLC----FQTDKVQLPQGGYRFGITAANADNPESFEILKL 209 (215)
T ss_pred ceeeEeccCCCCCEEEEEEEECCCCEEEEEECC-------CEE----EecCCeecCCCCCEEEEEEcCCCCCCcEEEEEE
Confidence 111111124577899999999877899999852 122 333332 45 55689999999999999999985
Q ss_pred ee
Q 040242 268 SF 269 (662)
Q Consensus 268 ~f 269 (662)
.+
T Consensus 210 ~~ 211 (215)
T cd06903 210 KV 211 (215)
T ss_pred EE
Confidence 43
No 437
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.57 E-value=2.3e-14 Score=132.72 Aligned_cols=135 Identities=17% Similarity=0.177 Sum_probs=114.4
Q ss_pred ccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcccc--ccceeeeeeEeccCeeeEEEeccCC
Q 040242 359 EKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRH--RNLVQLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 359 ~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H--~niv~l~~~~~~~~~~~lV~E~~~~ 436 (662)
+.+.||+|.++.||++... +..+++|....... ...+..|+..+..++| .++.+++.+....+..+++|||+++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g 77 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEG 77 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCC
Confidence 3577999999999999984 36899999866543 4678899999999987 5899999988888889999999988
Q ss_pred CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 437 GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 437 gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
+.+..+ +......++.+++++|.+||.....+++|+|++|+||++++.+.+++.|||+++.
T Consensus 78 ~~~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 78 ETLDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred eecccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 877654 3456677899999999999985445799999999999999989999999998874
No 438
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.57 E-value=2.6e-15 Score=169.08 Aligned_cols=211 Identities=24% Similarity=0.265 Sum_probs=144.1
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEecc
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
.+|+..++|-.|+||.||...++.+.+++|+| +.++.-- ++- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li-----lRn--ilt~a~npfvv------------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI-----LRN--ILTFAGNPFVV------------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhc-ccccchh-----hhc--cccccCCccee-------------------
Confidence 56888999999999999999998888889984 4332111 000 22233333333
Q ss_pred CCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCC
Q 040242 435 PNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNI 514 (662)
Q Consensus 435 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~ 514 (662)
|+-...++.. +.++- +++.+++|||+ .+|+|||+||+|.+++.-|.+|++|||+.+......
T Consensus 136 --gDc~tllk~~-----g~lPv--------dmvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~ 197 (1205)
T KOG0606|consen 136 --GDCATLLKNI-----GPLPV--------DMVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSL 197 (1205)
T ss_pred --chhhhhcccC-----CCCcc--------hhhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhhhc
Confidence 3333333221 22322 22789999999 899999999999999999999999999987542211
Q ss_pred C--------------CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHh
Q 040242 515 N--------------PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELH 580 (662)
Q Consensus 515 ~--------------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~ 580 (662)
. -....++||+.|.|||++....|....|.|++|+|+||.+-|+.||.+..+++-.. ..+...
T Consensus 198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg--~visd~- 274 (1205)
T KOG0606|consen 198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG--QVISDD- 274 (1205)
T ss_pred cchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHh--hhhhhh-
Confidence 0 01234689999999999988889999999999999999999999998765432111 111100
Q ss_pred hcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 040242 581 SQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTR 623 (662)
Q Consensus 581 ~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 623 (662)
... .+-+.....+...++.+.|+.+|..|--..
T Consensus 275 --i~w--------pE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 275 --IEW--------PEEDEALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred --ccc--------cccCcCCCHHHHHHHHHHHHhChHhhcccc
Confidence 000 111233445577788889999999996433
No 439
>PF03388 Lectin_leg-like: Legume-like lectin family; InterPro: IPR005052 Lectins are structurally diverse proteins that bind to specific carbohydrates. This family includes the VIP36 and ERGIC-53 lectins. These two proteins were the first members of the family of animal lectins similar to the leguminous plant lectins []. The alignment for this family is towards the N terminus, where the similarity of VIP36 and ERGIC-53 is greatest. Although they have been identified as a family of animal lectins, this alignment also includes yeast sequences[]. ERGIC-53 is a 53kDa protein, localised to the intermediate region between the endoplasmic reticulum and the Golgi apparatus (ER-Golgi-Intermediate Compartment, ERGIC). It was identified as a calcium-dependent, mannose-specific lectin []. Its dysfunction has been associated with combined factors V and VIII deficiency, suggesting an important and substrate-specific role for ERGIC-53 in the glycoprotein-secreting pathway [,]. The L-type lectin-like domain has an overall globular shape composed of a beta-sandwich of two major twisted antiparallel beta-sheets. The beta-sandwich comprises a major concave beta-sheet and a minor convex beta-sheet, in a variation of the jelly roll fold [, , , ]. ; GO: 0016020 membrane; PDB: 3A4U_A 3LCP_B 2A6Z_A 2A71_C 2A70_B 2A6Y_A 2A6X_A 2A6W_B 2A6V_B 2E6V_B ....
Probab=99.55 E-value=8.1e-14 Score=138.75 Aligned_cols=198 Identities=20% Similarity=0.252 Sum_probs=122.3
Q ss_pred CCeeEecceeeeCCCeEEecCCCCCeeEEEEcCCceeecccccccccCCCCCceeeeeEEEEEEEEecCCCCCCCCceeE
Q 040242 31 ANLSLDGTAFVRKDGILAVSNDQGRILGHAFYPSPLRFKQLSKYNINNNTISHTALTFSTNFVFSIVPKYPQLGGHGLAF 110 (662)
Q Consensus 31 ~~~~l~G~a~~~~~~~~~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF 110 (662)
.++.+.|+|.+. ++.|+||++.+++.|.+|.+.|++.- +|+.+|+|+|.......+||||||
T Consensus 22 ~~W~~~G~t~i~-~~~IrLTp~~~~~~G~iws~~~~~~~-----------------~w~i~~~Fri~g~~~~~~g~G~a~ 83 (229)
T PF03388_consen 22 PNWDIGGSTVIT-DNFIRLTPDRQSQSGSIWSRKPIPFD-----------------NWEIEFTFRISGQEKGLGGDGMAF 83 (229)
T ss_dssp TTEEEEET-EEE-SSEEEEE-SSTTEEEEEEESS-BEES-----------------EEEEEEEEEEESS-SSS-S-EEEE
T ss_pred CCEEECCeEEec-CCEEEECCCcccCEEEEEEcCCCCcc-----------------CEEEEEEEEEeccccCcCCCeEEE
Confidence 489999999887 88999999999999999999999975 499999999998855678999999
Q ss_pred EEccCCCCCCCCcccccCCCCCCCCCCCCCcEEEEEeeccCCCCCC-CCCCCeeEEecCCCcccccccccccccCCCCCC
Q 040242 111 VLMSRKQPPSCLANQYLGLPNDTSNAKFSTRILAVEFDAVQNLELQ-DINDNHVGIDISSLISNISEPAAYYFSKGSNIN 189 (662)
Q Consensus 111 ~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~-d~~~~Hvgid~ns~~s~~~~~~~~~~~~~~~~~ 189 (662)
.++.... ..|..+|..+.- .=+||=||||.|.+-. ......|.+-+|. .+..+....|.....-
T Consensus 84 W~t~~~~----~~G~~fG~~~~f-------~Gl~i~idt~~N~~~~~~~~~p~i~~~~ND----Gt~~~~~~~dg~~~~~ 148 (229)
T PF03388_consen 84 WYTKDPG----SDGPVFGGPDKF-------DGLGIFIDTYDNDEGGHKRGFPYISAMLND----GTKSYDHDNDGKDQSL 148 (229)
T ss_dssp EEESSSS----SSCSBTTB-SS--------EEEEEEEEES-TTCTTCTSTSSEEEEEEEE----SSS---GGGTTTTT-S
T ss_pred EEEcCcc----ccccccCCCccc-------ceEEEEEEcccCCCcccccccceEEEEecC----CCccccccccCccccc
Confidence 9987652 255666653321 1189999999986321 1233455554443 2232222222111111
Q ss_pred CCCcceeec-CCCcEEEEEEEeCCCcEEEEEEccC--CCCCCCCCeeeeecccccccccceEEeeeccCCcccceeEEec
Q 040242 190 DDNISVVLK-SGDPIQAWIDYNSQEMLINVTISPL--GIPKPHRPLISYPIDLATVLDEYMYVGFSASTGLLTAFHNVHG 266 (662)
Q Consensus 190 ~~~~~~~l~-~g~~~~~~I~Y~~~~~~l~V~~~~~--~~~~~~~~~ls~~vdL~~~l~~~~~vGFsastG~~~~~~~i~s 266 (662)
..+ ...+. .+.+.+++|.|... .+.|.+... .....-..++... .-.||+..|+||||+||...+.|+|++
T Consensus 149 ~~C-~~~~rn~~~p~~~ri~Y~~~--~l~v~id~~~~~~~~~~~~Cf~~~---~v~LP~~~yfGvSA~Tg~~~d~hdi~s 222 (229)
T PF03388_consen 149 GSC-SADYRNSDVPTRIRISYSKN--TLTVSIDSNYLKNQDDWELCFTTD---GVDLPEGYYFGVSAATGELSDNHDILS 222 (229)
T ss_dssp EEE-E---BTESSEEEEEEEEETT--EEEEEEETSCCSECCTTEEEEEES---TEEGGSSBEEEEEEEESSSGGEEEEEE
T ss_pred ccc-eeccCcCCCCEEEEEEEECC--eEEEEEecccccCCcCCcEEEEcC---CeecCCCCEEEEEecCCCCCCcEEEEE
Confidence 111 11222 35678999999964 567776521 1011112233321 113678889999999999999999987
Q ss_pred c
Q 040242 267 W 267 (662)
Q Consensus 267 W 267 (662)
-
T Consensus 223 ~ 223 (229)
T PF03388_consen 223 V 223 (229)
T ss_dssp E
T ss_pred E
Confidence 3
No 440
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.54 E-value=4.2e-14 Score=137.04 Aligned_cols=138 Identities=20% Similarity=0.223 Sum_probs=98.2
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh--hHHH----------------------HHHHHHHhhcccccc--
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ--GMKE----------------------FVAEITSMGRLRHRN-- 413 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~--~~~~----------------------f~~Ei~~l~~l~H~n-- 413 (662)
.+.||+|+||+||+|... +++.||||++...... .... ...|...+.++.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999986 7889999998654211 1111 134555555554433
Q ss_pred ceeeeeeEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEe
Q 040242 414 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLI 493 (662)
Q Consensus 414 iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 493 (662)
+.+.+++ ...++||||++++.+........ ... .+...++.+++.++.++|.. .+++|+||||+||++
T Consensus 81 ~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-----~~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nili 148 (187)
T cd05119 81 VPKPIDL----NRHVLVMEFIGGDGIPAPRLKDV-----RLL-EDPEELYDQILELMRKLYRE--AGLVHGDLSEYNILV 148 (187)
T ss_pred CCceEec----CCCEEEEEEeCCCCccChhhhhh-----hhc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCChhhEEE
Confidence 3444443 24589999999965432211110 011 56778999999999999984 689999999999999
Q ss_pred CCCCCeEEeecccccccc
Q 040242 494 DADLNPKLGDFGLARAYD 511 (662)
Q Consensus 494 ~~~~~~kL~DfGla~~~~ 511 (662)
+ ++.++|+|||.+....
T Consensus 149 ~-~~~~~liDfg~a~~~~ 165 (187)
T cd05119 149 D-DGKVYIIDVPQAVEID 165 (187)
T ss_pred E-CCcEEEEECccccccc
Confidence 9 8999999999997543
No 441
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.51 E-value=1e-13 Score=139.63 Aligned_cols=135 Identities=19% Similarity=0.213 Sum_probs=105.8
Q ss_pred cceee-eeCceEEEEEEeCCCCcEEEEEEeeccc-------------hhhHHHHHHHHHHhhccccccc--eeeeeeEec
Q 040242 360 KNLVG-SGGFGKVYRGVIPSTGLEVAIKRVAHNS-------------RQGMKEFVAEITSMGRLRHRNL--VQLHGWCRK 423 (662)
Q Consensus 360 ~~~LG-~G~~g~Vy~~~~~~~g~~vavK~~~~~~-------------~~~~~~f~~Ei~~l~~l~H~ni--v~l~~~~~~ 423 (662)
...|| .||.|+||+... .+..++||++.... ......+.+|+.++.+|+|+++ .+.++++..
T Consensus 36 ~~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 45788 899999999988 36789999885421 1223567889999999998885 677776544
Q ss_pred cC----eeeEEEeccCC-CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCC
Q 040242 424 QD----ELLLVYDYVPN-GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLN 498 (662)
Q Consensus 424 ~~----~~~lV~E~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~ 498 (662)
.. ..++|||++++ .+|.+++... .++.. .+.+++++|.+||+ .+|+||||||.|||++.++.
T Consensus 114 ~~~~~~~~~lV~e~l~G~~~L~~~l~~~------~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NILv~~~~~ 180 (239)
T PRK01723 114 RHGLFYRADILIERIEGARDLVALLQEA------PLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNILLDPDGK 180 (239)
T ss_pred ecCcceeeeEEEEecCCCCCHHHHHhcC------CCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhEEEcCCCC
Confidence 32 23599999997 6898887432 23332 35689999999999 89999999999999999999
Q ss_pred eEEeecccccc
Q 040242 499 PKLGDFGLARA 509 (662)
Q Consensus 499 ~kL~DfGla~~ 509 (662)
++|+|||.+..
T Consensus 181 v~LIDfg~~~~ 191 (239)
T PRK01723 181 FWLIDFDRGEL 191 (239)
T ss_pred EEEEECCCccc
Confidence 99999998875
No 442
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.44 E-value=1.4e-14 Score=163.18 Aligned_cols=255 Identities=22% Similarity=0.252 Sum_probs=187.4
Q ss_pred cCCcccceeeeeCceEEEEEEeCC-CCcEEEEEEeeccc--hhhHHHHHHHHHHhhccc-cccceeeeeeEeccCeeeEE
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPS-TGLEVAIKRVAHNS--RQGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~-~g~~vavK~~~~~~--~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lV 430 (662)
..|...+.||+|.++.|-...... ....+|+|.+.... ....+....|..+-..+. |+|++++++.....+..+++
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~ 99 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLS 99 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccc
Confidence 456677889999999998887743 34557777775543 223334445777777776 99999999999999999999
Q ss_pred EeccCCCCcchhcc-cccccccccccHHHHHHHHHHHHHHHHHhH-hcCCCCEEeCCcCCCceEeCCCC-CeEEeecccc
Q 040242 431 YDYVPNGSLDKLLF-DNDQQKKKILNWDQRYKILIGVAQALLYLH-EECDQRVVHRDVKPSNVLIDADL-NPKLGDFGLA 507 (662)
Q Consensus 431 ~E~~~~gsL~~~l~-~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH-~~~~~~ivH~Dlkp~NIll~~~~-~~kL~DfGla 507 (662)
.||..++++.+-+. .. ....+....-..+.|+..++.|+| . .++.|+||||+|.+++..+ ..+++|||++
T Consensus 100 ~~~s~g~~~f~~i~~~~----~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~A 172 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPD----STGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLA 172 (601)
T ss_pred cCcccccccccccccCC----ccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhh
Confidence 99999999999883 32 223445556678899999999999 6 8999999999999999999 9999999999
Q ss_pred ccccC--CCCCcceeccc-CCcccCcccccCC-CCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcC
Q 040242 508 RAYDH--NINPQTTHIVG-TLGYLAPELTRTG-KATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQG 583 (662)
Q Consensus 508 ~~~~~--~~~~~~~~~~g-t~~y~aPE~~~~~-~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~ 583 (662)
..+.. +.........| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+......... ...|....
T Consensus 173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~-~~~~~~~~---- 247 (601)
T KOG0590|consen 173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGR-YSSWKSNK---- 247 (601)
T ss_pred ccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccccc-ceeecccc----
Confidence 98766 22333344578 9999999988774 5577889999999999999999998755433211 11111110
Q ss_pred ccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 584 QITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 584 ~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
+..-............++..+|+..+|..|.+.+++..
T Consensus 248 ------~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 248 ------GRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ------cccccCccccCChhhhhcccccccCCchhccccccccc
Confidence 00001111123344567777888899999999888764
No 443
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.40 E-value=3e-13 Score=134.76 Aligned_cols=203 Identities=22% Similarity=0.350 Sum_probs=141.1
Q ss_pred HHhhccccccceeeeeeEecc-----CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCC
Q 040242 404 TSMGRLRHRNLVQLHGWCRKQ-----DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECD 478 (662)
Q Consensus 404 ~~l~~l~H~niv~l~~~~~~~-----~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~ 478 (662)
..|-++-|.|||+++.|+.+. .+..++.|||+.|+|..+|++.... ...+......+++.||..||.|||+ |.
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~-~~a~~~~~wkkw~tqIlsal~yLhs-~~ 196 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKN-QKALFQKAWKKWCTQILSALSYLHS-CD 196 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHh-hhhhhHHHHHHHHHHHHhhhhhhhc-cC
Confidence 345556799999999987544 3578999999999999999765432 4557777788999999999999998 67
Q ss_pred CCEEeCCcCCCceEeCCCCCeEEeeccccccccCC----CCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHH
Q 040242 479 QRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHN----INPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEV 554 (662)
Q Consensus 479 ~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~el 554 (662)
++|+|+++..+-|++..++-+||+--. ....... ....+....+-++|.+||+=.....+-.+|||+||+..+||
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~a-p~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlem 275 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVA-PDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEM 275 (458)
T ss_pred CccccCCcchhheeecCCceEEecccC-ccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHH
Confidence 999999999999999999888885311 1111110 11112223457899999987777778899999999999999
Q ss_pred HcCCCCCCcccch--hhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Q 040242 555 ACGRRPIEPQRTA--MELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFL 629 (662)
Q Consensus 555 ltG~~p~~~~~~~--~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L 629 (662)
..+..--...... .+.... +....+...+ -..++.+|++..|..||+|++.+.+.
T Consensus 276 ailEiq~tnseS~~~~ee~ia----------~~i~~len~l----------qr~~i~kcl~~eP~~rp~ar~llfHp 332 (458)
T KOG1266|consen 276 AILEIQSTNSESKVEVEENIA----------NVIIGLENGL----------QRGSITKCLEGEPNGRPDARLLLFHP 332 (458)
T ss_pred HHheeccCCCcceeehhhhhh----------hheeeccCcc----------ccCcCcccccCCCCCCcchhhhhcCc
Confidence 8876532211110 000000 0001111111 12455689999999999999988753
No 444
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.38 E-value=1.7e-12 Score=141.91 Aligned_cols=142 Identities=18% Similarity=0.233 Sum_probs=100.9
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhH----------------------------------------HHH
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGM----------------------------------------KEF 399 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~----------------------------------------~~f 399 (662)
.+.||.|++|.||+|+++ +|+.||||+.+....... -+|
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 468999999999999985 689999999865421110 024
Q ss_pred HHHHHHhhccc----cccceeeeeeE-eccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHH-HHHHh
Q 040242 400 VAEITSMGRLR----HRNLVQLHGWC-RKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQ-ALLYL 473 (662)
Q Consensus 400 ~~Ei~~l~~l~----H~niv~l~~~~-~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~-~L~yL 473 (662)
..|...+.+++ |.+-+.+-..+ ......+|||||++|++|.++..... ... .+..++..+++ .+..+
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~----~~~---~~~~ia~~~~~~~l~ql 273 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE----AGL---DRKALAENLARSFLNQV 273 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh----cCC---CHHHHHHHHHHHHHHHH
Confidence 55666555553 32323332222 23345799999999999998764221 111 34556776666 46788
Q ss_pred HhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 474 HEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 474 H~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
|. .+++|+|++|.||+++.++++++.|||++..+..
T Consensus 274 ~~---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 274 LR---DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred Hh---CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 87 8999999999999999999999999999987653
No 445
>KOG3839 consensus Lectin VIP36, involved in the transport of glycoproteins carrying high mannose-type glycans [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.36 E-value=1.1e-11 Score=123.43 Aligned_cols=198 Identities=21% Similarity=0.238 Sum_probs=140.9
Q ss_pred CCeeEecceeeeCCCeEEecCCCCCeeEEEEcCCceeecccccccccCCCCCceeeeeEEEEEEEEecCCCCCCCCceeE
Q 040242 31 ANLSLDGTAFVRKDGILAVSNDQGRILGHAFYPSPLRFKQLSKYNINNNTISHTALTFSTNFVFSIVPKYPQLGGHGLAF 110 (662)
Q Consensus 31 ~~~~l~G~a~~~~~~~~~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF 110 (662)
.++.+.|++.+. ..-++||.+.+++.|.++=.+||-.. .|...+.|.|..+.....|||||+
T Consensus 72 ~~W~~~Gstvv~-~~~irLT~d~qsk~GAv~n~~Pv~s~-----------------~wev~v~fkv~~~s~~lfgdG~Ai 133 (351)
T KOG3839|consen 72 PNWNLSGSTVVT-SNYIRLTPDEQSKSGAVWNRQPVFSR-----------------DWEVLVHFKVHGQSKNLFGDGMAI 133 (351)
T ss_pred cCccccccEEEE-eeeeeccccccccccccccCCCcccc-----------------ceeEEEEEEEecCCCcccccceEE
Confidence 489999999887 67799999999999999999999866 399999999999988999999999
Q ss_pred EEccCCCCCCCCcccccCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCeeEEecCCCcccccccccccccCCCCCCC
Q 040242 111 VLMSRKQPPSCLANQYLGLPNDTSNAKFSTRILAVEFDAVQNLELQDINDNHVGIDISSLISNISEPAAYYFSKGSNIND 190 (662)
Q Consensus 111 ~l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~~~~~~~~ 190 (662)
..+-.+.. +|..+|-++.- +.+||=.|||.|.+ -...||---+..++++ -+++|+.++++..++
T Consensus 134 w~t~Er~q----~GPvFG~~dkF-------~GL~vfidtY~n~~---g~~~~v~P~isvmv~~--gs~sYD~~~Dg~~te 197 (351)
T KOG3839|consen 134 WYTKERAQ----PGPVFGSKDKF-------TGLAVFIDTYGNHN---GPHEHVFPYISVMVNI--GSLSYDHSKDGTHTE 197 (351)
T ss_pred Eeeccccc----CCCCCCCcccc-------eeEEEEEeccCCcC---CCcccceeeEEEEecc--CCcccccCCCCCccc
Confidence 99987632 66777775542 23899999999853 1234442222222222 344566666543322
Q ss_pred CCc-ceeecCCC-cEEEEEEEeCCCcEEEEEEccCCCCCCCCCeeeeecccccc-cccceEEeeeccCCcccceeEEecc
Q 040242 191 DNI-SVVLKSGD-PIQAWIDYNSQEMLINVTISPLGIPKPHRPLISYPIDLATV-LDEYMYVGFSASTGLLTAFHNVHGW 267 (662)
Q Consensus 191 ~~~-~~~l~~g~-~~~~~I~Y~~~~~~l~V~~~~~~~~~~~~~~ls~~vdL~~~-l~~~~~vGFsastG~~~~~~~i~sW 267 (662)
-.. ...+++.. .-..-|.|+. +.|++.++..+ | -.+...++|..+ +|.--|+|+||+||.+...|.|.+-
T Consensus 198 l~gc~a~~rn~~~dt~~~iry~~--~~l~~~~dl~~---~--~~~~~c~~~n~v~lp~g~~fg~SasTGdlSd~HdivS~ 270 (351)
T KOG3839|consen 198 LAGCTANFRNLPHDTLVVIRYEK--KTLSISIDLEG---P--NEWIDCFSLNNVELPLGYFFGVSASTGDLSDSHDIVSL 270 (351)
T ss_pred cccceeeeccCCCcceeEEEecC--CceEEEEecCC---C--ceeeeeeeecceecccceEEeeeeccCccchhhHHHHh
Confidence 221 11223322 3447899997 67777766433 1 246677888876 6888999999999999999999885
Q ss_pred ee
Q 040242 268 SF 269 (662)
Q Consensus 268 ~f 269 (662)
.+
T Consensus 271 kl 272 (351)
T KOG3839|consen 271 KL 272 (351)
T ss_pred hh
Confidence 44
No 446
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.30 E-value=2.2e-12 Score=139.28 Aligned_cols=248 Identities=23% Similarity=0.295 Sum_probs=182.8
Q ss_pred CCcccceeee--eCceEEEEEEe--CCCCcEEEEEEeecc--chhhHHHHHHHHHHhhcc-ccccceeeeeeEeccCeee
Q 040242 356 GFREKNLVGS--GGFGKVYRGVI--PSTGLEVAIKRVAHN--SRQGMKEFVAEITSMGRL-RHRNLVQLHGWCRKQDELL 428 (662)
Q Consensus 356 ~f~~~~~LG~--G~~g~Vy~~~~--~~~g~~vavK~~~~~--~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~~ 428 (662)
.|...+.+|. |.+|.+|.+.. ...+..+|+|+-+.. .......=.+|+....++ .|+|.++....++..+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556788999 99999999998 788899999984433 222223335677666777 4999999888899999999
Q ss_pred EEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHH----HHHHhHhcCCCCEEeCCcCCCceEeCCC-CCeEEee
Q 040242 429 LVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQ----ALLYLHEECDQRVVHRDVKPSNVLIDAD-LNPKLGD 503 (662)
Q Consensus 429 lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~----~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~D 503 (662)
+-.|++ +.+|..+.+.. ...++....+....+..+ ||.++|. ..++|-|+||.||+...+ ...+++|
T Consensus 195 iqtE~~-~~sl~~~~~~~----~~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~d 266 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTP----CNFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTD 266 (524)
T ss_pred eeeccc-cchhHHhhhcc----cccCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCC
Confidence 999999 57888877544 344666777777888888 9999999 899999999999999999 8899999
Q ss_pred ccccccccCCCCC----cceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHH
Q 040242 504 FGLARAYDHNINP----QTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVREL 579 (662)
Q Consensus 504 fGla~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~ 579 (662)
||+...+...... ......|...|++||..+ +.++...|+|++|.+.+|..++..+....... .| ..
T Consensus 267 f~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~------~W--~~ 337 (524)
T KOG0601|consen 267 FGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNS------SW--SQ 337 (524)
T ss_pred cceeEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCC------Cc--cc
Confidence 9999988765321 112236788999999886 56788999999999999999988765433111 11 11
Q ss_pred hhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHH
Q 040242 580 HSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQ 627 (662)
Q Consensus 580 ~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~ 627 (662)
.+++-+. .++-..-...+......+++.+|..|++.+.+..
T Consensus 338 ~r~~~ip-------~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 LRQGYIP-------LEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred cccccCc-------hhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 1111100 1111122233444778899999999999888765
No 447
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.23 E-value=1.1e-11 Score=137.12 Aligned_cols=146 Identities=16% Similarity=0.215 Sum_probs=94.5
Q ss_pred cCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhh----------------------------------HH---
Q 040242 355 KGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQG----------------------------------MK--- 397 (662)
Q Consensus 355 ~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~----------------------------------~~--- 397 (662)
..|+. +.||+|++|.||+|+++++|+.||||+.+....+. .+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 35666 78999999999999998779999999997552111 11
Q ss_pred ---HHHHHHHHhhccc----cccceeeeeeEe-ccCeeeEEEeccCCCCcchhc--ccccccccccccHHHHHHHHHHHH
Q 040242 398 ---EFVAEITSMGRLR----HRNLVQLHGWCR-KQDELLLVYDYVPNGSLDKLL--FDNDQQKKKILNWDQRYKILIGVA 467 (662)
Q Consensus 398 ---~f~~Ei~~l~~l~----H~niv~l~~~~~-~~~~~~lV~E~~~~gsL~~~l--~~~~~~~~~~l~~~~~~~i~~~ia 467 (662)
+|..|+..+.+++ +.+.+.+-..+. ...+.+|||||++|+.|.++- .... .....+.......++.|+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g-~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAG-TDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcC-CCHHHHHHHHHHHHHHHH-
Confidence 2344554444442 333333222222 234568999999999998742 1111 001122222222233333
Q ss_pred HHHHHhHhcCCCCEEeCCcCCCceEeCCCC----CeEEeeccccccccC
Q 040242 468 QALLYLHEECDQRVVHRDVKPSNVLIDADL----NPKLGDFGLARAYDH 512 (662)
Q Consensus 468 ~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~----~~kL~DfGla~~~~~ 512 (662)
.. .+++|+|+||.||+++.++ .+++.|||++..++.
T Consensus 277 ------f~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 277 ------FR---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred ------Hh---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 23 7999999999999999988 899999999987654
No 448
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.19 E-value=4e-10 Score=123.09 Aligned_cols=171 Identities=20% Similarity=0.258 Sum_probs=128.8
Q ss_pred EEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEeccCCCCcchhcccccccccc
Q 040242 373 RGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKK 452 (662)
Q Consensus 373 ~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~ 452 (662)
.|..+.++.+|.|+.+............+-++.|+.+|||||++++...+..+..|||+|-+. .|..++.+
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~------- 100 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKE------- 100 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHH-------
Confidence 466667888999998877666444556777899999999999999999999999999999873 56666632
Q ss_pred cccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcceecccCCcccCccc
Q 040242 453 ILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPEL 532 (662)
Q Consensus 453 ~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~ 532 (662)
+......-.+.||+.||.+||+. .+++|++|.-..|++++.|..||++|.++.....-.. ......--..|..|+.
T Consensus 101 -l~~~~v~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~-~~~~~~~~~s~~~P~~ 176 (690)
T KOG1243|consen 101 -LGKEEVCLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA-PAKSLYLIESFDDPEE 176 (690)
T ss_pred -hHHHHHHHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc-ccccchhhhcccChhh
Confidence 22344555788999999999975 7899999999999999999999999998875433211 1111112234566665
Q ss_pred ccCCCCCcchhHHHHHHHHHHHHcCC
Q 040242 533 TRTGKATTSTDVFGFGTLMLEVACGR 558 (662)
Q Consensus 533 ~~~~~~t~ksDV~S~Gvvl~elltG~ 558 (662)
+.... -..|.|.|||+++|++.|.
T Consensus 177 ~~~s~--~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 177 IDPSE--WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred cCccc--cchhhhhHHHHHHHHhCcc
Confidence 43222 3469999999999999993
No 449
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.19 E-value=8.4e-11 Score=111.80 Aligned_cols=131 Identities=18% Similarity=0.148 Sum_probs=96.6
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcccccccee-eeeeEeccCeeeEEEeccCCCC
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQ-LHGWCRKQDELLLVYDYVPNGS 438 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~-l~~~~~~~~~~~lV~E~~~~gs 438 (662)
.+.|+.|.++.||++... +..+++|....... ....+..|+.++..+.+.++++ ++.+. ....++||||+++.+
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~ 77 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSE 77 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCc
Confidence 457899999999999873 67899998765432 1234578999999887666554 44433 234589999999988
Q ss_pred cchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcC--CCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 439 LDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEEC--DQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 439 L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~--~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
+.... . ....++.+++++|..||+.. ...++|+|++|.||+++ ++.+++.||+.+..
T Consensus 78 l~~~~----------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 78 LLTED----------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred ccccc----------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 86531 0 11235678999999999832 12369999999999999 66899999998763
No 450
>KOG3838 consensus Mannose lectin ERGIC-53, involved in glycoprotein traffic [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.10 E-value=3.1e-09 Score=107.45 Aligned_cols=195 Identities=18% Similarity=0.216 Sum_probs=128.9
Q ss_pred CeeEecceeeeCCCeEEecCCCCCeeEEEEcCCceeecccccccccCCCCCceeeeeEEEEEEEEecCCCCCCCCceeEE
Q 040242 32 NLSLDGTAFVRKDGILAVSNDQGRILGHAFYPSPLRFKQLSKYNINNNTISHTALTFSTNFVFSIVPKYPQLGGHGLAFV 111 (662)
Q Consensus 32 ~~~l~G~a~~~~~~~~~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF~ 111 (662)
-+..-|||.. +.-.|+|+++..++.|.+|-+..+.+- -|..+-+|+|+..+ ..++||||+.
T Consensus 55 FW~~~GdAIa-s~eqvRlaPSmrsrkGavWtka~~~fe-----------------~weVev~~rVtGrG-RiGAdGlaiW 115 (497)
T KOG3838|consen 55 FWSHHGDAIA-SSEQVRLAPSMRSRKGAVWTKASVPFE-----------------NWEVEVQFRVTGRG-RIGADGLAIW 115 (497)
T ss_pred eeeecCcccc-cccceeeccccccccCceeecccCCcc-----------------cceEEEEEEecccc-cccCCceEEE
Confidence 4788899854 467899999999999999888777764 28899999999874 6789999999
Q ss_pred EccCCCCCCCCcccccCCCCCCCCCCCCCcEEEEEeeccCCCCCCCCCCCeeEEecCCCcccccccccccccCCCCCCCC
Q 040242 112 LMSRKQPPSCLANQYLGLPNDTSNAKFSTRILAVEFDAVQNLELQDINDNHVGIDISSLISNISEPAAYYFSKGSNINDD 191 (662)
Q Consensus 112 l~~~~~~~~~~~g~~lGl~~~~~~~~~~~~~vaVEFDt~~n~~~~d~~~~Hvgid~ns~~s~~~~~~~~~~~~~~~~~~~ 191 (662)
-+.... .-|..+|=.+.= + =+++-||.|.|. +--|..-|.+-.|.- +.+...-.|...-+=.+
T Consensus 116 Yt~~~G----~~GpVfGg~d~W-n------GigiffDSfdnD--~qknnP~Is~~lndG----t~~ydh~~DGasQ~Lss 178 (497)
T KOG3838|consen 116 YTRGRG----HVGPVFGGLDSW-N------GIGIFFDSFDND--GQKNNPAISVLLNDG----TIPYDHPGDGASQGLSS 178 (497)
T ss_pred EecCCC----cccccccccccc-c------ceEEEeeccccc--CCcCCccEEEEecCC----cccccCCCccHHHHHHH
Confidence 986542 233333332111 1 179999999985 334555666655432 22222111211100001
Q ss_pred CcceeecC-CCcEEEEEEEeCCCcEEEEEEccCCCCCCCCCeeeeecccccc-cccceEEeeeccCCcccceeEEecce
Q 040242 192 NISVVLKS-GDPIQAWIDYNSQEMLINVTISPLGIPKPHRPLISYPIDLATV-LDEYMYVGFSASTGLLTAFHNVHGWS 268 (662)
Q Consensus 192 ~~~~~l~~-g~~~~~~I~Y~~~~~~l~V~~~~~~~~~~~~~~ls~~vdL~~~-l~~~~~vGFsastG~~~~~~~i~sW~ 268 (662)
+ --+..| --+.+|+|+|- .++|+|.+...-.+. +-....++...+ ||..-|+|.||+||.+..-|+|++..
T Consensus 179 C-qrDFRNkPyPvRarItY~--~nvLtv~innGmtp~---d~yE~C~rve~~~lp~nGyFGvSAATGgLADDHDVl~Fl 251 (497)
T KOG3838|consen 179 C-QRDFRNKPYPVRARITYY--GNVLTVMINNGMTPS---DDYEFCVRVENLLLPPNGYFGVSAATGGLADDHDVLSFL 251 (497)
T ss_pred h-hHHhccCCCCceEEEEEe--ccEEEEEEcCCCCCC---CCcceeEeccceeccCCCeeeeeecccccccccceeeeE
Confidence 0 012222 24678999997 578999997543322 234456666765 48899999999999999999999854
No 451
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.07 E-value=3e-09 Score=112.72 Aligned_cols=172 Identities=19% Similarity=0.306 Sum_probs=134.3
Q ss_pred ceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccceeeeeeEec----cCeeeEEEeccCC-CCcchh
Q 040242 368 FGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQLHGWCRK----QDELLLVYDYVPN-GSLDKL 442 (662)
Q Consensus 368 ~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~----~~~~~lV~E~~~~-gsL~~~ 442 (662)
..+.||+....+|..|++||++....+.......-+++++++.|.|+|++.+.+.. +..+++||+|.|+ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 36889999999999999999965544444444566889999999999999998763 3478999999987 567665
Q ss_pred cccccc----------cccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 443 LFDNDQ----------QKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 443 l~~~~~----------~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
-..... .....+++..+|.++.|++.||.++|+ .|...+-|.+++|+++.+.+++|+.+|.......
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHs---sGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHS---SGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHh---cCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 543221 123457888999999999999999999 8999999999999999999999998887776544
Q ss_pred CCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCC
Q 040242 513 NINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRP 560 (662)
Q Consensus 513 ~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p 560 (662)
+.. |-+. --.+-|.=.||.+++.|.||...
T Consensus 446 d~~---------------~~le---~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 446 DPT---------------EPLE---SQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred CCC---------------cchh---HHhhhhHHHHHHHHHHHhhcccc
Confidence 320 1111 12467999999999999999654
No 452
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.06 E-value=1.3e-10 Score=125.64 Aligned_cols=248 Identities=21% Similarity=0.222 Sum_probs=176.4
Q ss_pred HhccCCcccceeeeeCceEEEEEEeC-CCCcEEEEEEeeccchhhHHH--HHHHHHHhhcc-ccccceeeeeeEeccCee
Q 040242 352 SATKGFREKNLVGSGGFGKVYRGVIP-STGLEVAIKRVAHNSRQGMKE--FVAEITSMGRL-RHRNLVQLHGWCRKQDEL 427 (662)
Q Consensus 352 ~at~~f~~~~~LG~G~~g~Vy~~~~~-~~g~~vavK~~~~~~~~~~~~--f~~Ei~~l~~l-~H~niv~l~~~~~~~~~~ 427 (662)
.-+.+|.....||.|.|+.|++.... .++..+++|.+.+.......+ -+.|+.+...+ .|.++++....+...+..
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 34467888999999999999987765 567889999886653322222 14455555555 588888887777777788
Q ss_pred eEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC-CCeEEeeccc
Q 040242 428 LLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD-LNPKLGDFGL 506 (662)
Q Consensus 428 ~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~-~~~kL~DfGl 506 (662)
++=-|||+++++...+. ....++...++++..|++.++.++|+ +.++|+|+||+||++..+ +..+++|||+
T Consensus 342 ~ip~e~~~~~s~~l~~~-----~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~ 413 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSV-----TSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGC 413 (524)
T ss_pred cCchhhhcCcchhhhhH-----HHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhcccccc
Confidence 89999999999877661 14567888899999999999999998 899999999999999886 8899999998
Q ss_pred cccccCCCCCcceecccCCccc--CcccccCCCCCcchhHHHHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCc
Q 040242 507 ARAYDHNINPQTTHIVGTLGYL--APELTRTGKATTSTDVFGFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQ 584 (662)
Q Consensus 507 a~~~~~~~~~~~~~~~gt~~y~--aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~ 584 (662)
+..+.-. ... ....-+++ +|+......+..+.|+|+||.-+.|.+++..--.... .|. .
T Consensus 414 ~t~~~~~---~~~-~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~--------~~~-------~ 474 (524)
T KOG0601|consen 414 WTRLAFS---SGV-FHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV--------QSL-------T 474 (524)
T ss_pred cccccee---ccc-ccccccccccchhhccccccccccccccccccccccccCcccCcccc--------cce-------e
Confidence 8742211 111 12223333 5556666778899999999999999999875433211 110 0
Q ss_pred cccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHh
Q 040242 585 ITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRVVQFLL 630 (662)
Q Consensus 585 ~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eVl~~L~ 630 (662)
+....-+.+ ......+..+...+..+++..||.+.+...+..
T Consensus 475 i~~~~~p~~----~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 475 IRSGDTPNL----PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred eecccccCC----CchHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 011111121 122255677777899999999999988776544
No 453
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.05 E-value=1.5e-09 Score=107.70 Aligned_cols=143 Identities=18% Similarity=0.206 Sum_probs=109.3
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeeccch-hhHHHHHHHHHHhhccccc--cceeeeeeEeccC---eeeEEEec
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR-QGMKEFVAEITSMGRLRHR--NLVQLHGWCRKQD---ELLLVYDY 433 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~-~~~~~f~~Ei~~l~~l~H~--niv~l~~~~~~~~---~~~lV~E~ 433 (662)
.+.|+.|..+.+|++... +|..+++|....... ....++..|+++++.+++. ++.+++.++.... ..++||||
T Consensus 3 ~~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~ 81 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMER 81 (223)
T ss_pred ceecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEE
Confidence 357899999999999884 367899998765432 1345778999999999764 4567788776643 56899999
Q ss_pred cCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcC------------------------------------
Q 040242 434 VPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEEC------------------------------------ 477 (662)
Q Consensus 434 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~------------------------------------ 477 (662)
+++.+|.+.+.. ..++..++..++.++++.|..||+..
T Consensus 82 i~G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (223)
T cd05154 82 VDGRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPP 155 (223)
T ss_pred eCCEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccH
Confidence 999998886621 23566677778888888888887421
Q ss_pred -----------------CCCEEeCCcCCCceEeCC--CCCeEEeecccccc
Q 040242 478 -----------------DQRVVHRDVKPSNVLIDA--DLNPKLGDFGLARA 509 (662)
Q Consensus 478 -----------------~~~ivH~Dlkp~NIll~~--~~~~kL~DfGla~~ 509 (662)
...++|+|+++.||+++. ++.+.|.||+.+..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 156 AMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 256899999999999998 56689999987764
No 454
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.03 E-value=4.6e-09 Score=101.56 Aligned_cols=138 Identities=19% Similarity=0.144 Sum_probs=97.8
Q ss_pred ceeeeeCceEEEEEEeCC------CCcEEEEEEeeccc------------h----------hhHHHHH----HHHHHhhc
Q 040242 361 NLVGSGGFGKVYRGVIPS------TGLEVAIKRVAHNS------------R----------QGMKEFV----AEITSMGR 408 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~------~g~~vavK~~~~~~------------~----------~~~~~f~----~Ei~~l~~ 408 (662)
..||.|--+.||.|.... .+..+|||..+... . ...+.+. +|+..|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998743 35789999874321 0 0122233 78999988
Q ss_pred ccc--ccceeeeeeEeccCeeeEEEeccCCCCcch-hcccccccccccccHHHHHHHHHHHHHHHHHh-HhcCCCCEEeC
Q 040242 409 LRH--RNLVQLHGWCRKQDELLLVYDYVPNGSLDK-LLFDNDQQKKKILNWDQRYKILIGVAQALLYL-HEECDQRVVHR 484 (662)
Q Consensus 409 l~H--~niv~l~~~~~~~~~~~lV~E~~~~gsL~~-~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~ivH~ 484 (662)
+.. -++.+++++ ..-+|||||+.+..+.. .|. ...++..+...+..+++.+|..| |+ .+++|+
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk------d~~~~~~~~~~i~~~i~~~l~~l~H~---~glVHG 149 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK------DAKLNDEEMKNAYYQVLSMMKQLYKE---CNLVHA 149 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh------ccccCHHHHHHHHHHHHHHHHHHHHh---CCeecC
Confidence 854 344555554 45689999997654422 221 12244455667789999999999 77 799999
Q ss_pred CcCCCceEeCCCCCeEEeeccccccccC
Q 040242 485 DVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 485 Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
||++.||+++ ++.+.|+|||.+...++
T Consensus 150 DLs~~NIL~~-~~~v~iIDF~qav~~~h 176 (197)
T cd05146 150 DLSEYNMLWH-DGKVWFIDVSQSVEPTH 176 (197)
T ss_pred CCCHHHEEEE-CCcEEEEECCCceeCCC
Confidence 9999999997 46899999998876543
No 455
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.95 E-value=7.1e-09 Score=97.02 Aligned_cols=131 Identities=21% Similarity=0.308 Sum_probs=101.5
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEE-eecc-------chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEEEe
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKR-VAHN-------SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLVYD 432 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~-~~~~-------~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV~E 432 (662)
..+++|+-+.+|.+.+ -|..+++|. +.+. .+-......+|+.++.+++--.|--.+-+..+.....++||
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me 79 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVME 79 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEE
Confidence 3578999999999977 344566663 2221 11223457889999999876666666666677778899999
Q ss_pred ccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 433 YVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 433 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
|+++..|.+.+... +..++..+-.-+.-||. .+|+|+||.++||++..+. +.++||||+..
T Consensus 80 ~I~G~~lkd~l~~~------------~~~~~r~vG~~vg~lH~---~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 80 YIEGELLKDALEEA------------RPDLLREVGRLVGKLHK---AGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred EeCChhHHHHHHhc------------chHHHHHHHHHHHHHHh---cCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 99999999888432 35577778888889999 8999999999999998765 99999999985
No 456
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.91 E-value=1.3e-08 Score=94.85 Aligned_cols=144 Identities=18% Similarity=0.264 Sum_probs=106.1
Q ss_pred ccceeeeeCceEEEEEEeCCCCcEEEEEE-eecc-------chhhHHHHHHHHHHhhccccccceeeeeeEeccCeeeEE
Q 040242 359 EKNLVGSGGFGKVYRGVIPSTGLEVAIKR-VAHN-------SRQGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLLV 430 (662)
Q Consensus 359 ~~~~LG~G~~g~Vy~~~~~~~g~~vavK~-~~~~-------~~~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~lV 430 (662)
...+|-+|+-+.|+++.+ .|+...||. +.+. ..-..+..++|++.+.+++--.|.-..-++.+...-.|+
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ 88 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIY 88 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEE
Confidence 567899999999999998 567777773 2221 122346778999999998765665555555566666899
Q ss_pred EeccCC-CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCC---eEEeeccc
Q 040242 431 YDYVPN-GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLN---PKLGDFGL 506 (662)
Q Consensus 431 ~E~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~---~kL~DfGl 506 (662)
|||+++ .++.+++..... ..........++..|-+.+.-||. ..|+|+||..+||+|..++. +.+.|||+
T Consensus 89 ME~~~g~~~vk~~i~~~~~---~~~~d~~~~~~~~~iG~~igklH~---ndiiHGDLTTSNill~~~~~~~~~~lIdfgl 162 (229)
T KOG3087|consen 89 MEFIDGASTVKDFILSTME---DESEDEGLAELARRIGELIGKLHD---NDIIHGDLTTSNILLRSDGNQITPILIDFGL 162 (229)
T ss_pred EEeccchhHHHHHHHHHcc---CcccchhHHHHHHHHHHHHHHhhh---CCeecccccccceEEecCCCcCceEEEeecc
Confidence 999976 478888754321 112222236788899999999999 89999999999999976654 58999999
Q ss_pred cccc
Q 040242 507 ARAY 510 (662)
Q Consensus 507 a~~~ 510 (662)
+...
T Consensus 163 s~~s 166 (229)
T KOG3087|consen 163 SSVS 166 (229)
T ss_pred hhcc
Confidence 8753
No 457
>cd06900 lectin_VcfQ VcfQ bacterial pilus biogenesis protein, lectin domain. This family includes bacterial proteins homologous to the VcfQ (also known as MshQ) bacterial pilus biogenesis protein. VcfQ is encoded by the vcfQ gene of the type IV pilus gene cluster of Vibrio cholerae and is essential for type IV pilus assembly. VcfQ has a Laminin G-like domain as well as an L-type lectin domain.
Probab=98.79 E-value=5.8e-07 Score=86.89 Aligned_cols=202 Identities=16% Similarity=0.153 Sum_probs=114.5
Q ss_pred CCeEEecCCCCCeeEEEEcCCceeecccccccccCCCCCceeeeeEEEEEEEEecCCCCCCCCceeEEEccCCC-CCCCC
Q 040242 44 DGILAVSNDQGRILGHAFYPSPLRFKQLSKYNINNNTISHTALTFSTNFVFSIVPKYPQLGGHGLAFVLMSRKQ-PPSCL 122 (662)
Q Consensus 44 ~~~~~Lt~~~~~~~Gr~~y~~pv~l~~~~~~~~~~~~~~~~~~sF~t~F~f~i~~~~~~~~gdGlaF~l~~~~~-~~~~~ 122 (662)
+|.||||+...+++|-+.|.++++--+ + -...+|.+..-.. ...++||+||||+-... +..+.
T Consensus 31 ~g~LRLT~~~~nqata~~~~~~FPs~~--------n-------~v~veFd~yayg~-~g~GADGia~vLsDasv~p~~G~ 94 (255)
T cd06900 31 NNRLRLTDASGNQATAVTLQRLFPSAG--------N-------YVEVEFDYYAYGS-GGNGADGVALVLSDASVTPQAGA 94 (255)
T ss_pred cCeEEeccCccCcceeEEEeeeeccCC--------C-------eEEEEEEEEEecC-CCCCCceEEEEEeCCCcCCcCCC
Confidence 689999999999999999999988441 1 1677888777654 46689999999984332 23567
Q ss_pred cccccCCCCCC-CCCCCCCcEEEEEeeccCCCC-CCCCCCCeeEEecCCCc---ccc-cccccccccCCCCCCCCCccee
Q 040242 123 ANQYLGLPNDT-SNAKFSTRILAVEFDAVQNLE-LQDINDNHVGIDISSLI---SNI-SEPAAYYFSKGSNINDDNISVV 196 (662)
Q Consensus 123 ~g~~lGl~~~~-~~~~~~~~~vaVEFDt~~n~~-~~d~~~~Hvgid~ns~~---s~~-~~~~~~~~~~~~~~~~~~~~~~ 196 (662)
.||.||+--+. .........++|-||-|-|.. -.+....-.|.--+++. |.. ...+.|... +. .. ...++
T Consensus 95 fGGsLGYa~~~~~~~GfaGGwLGiGlDEyGNFsn~~eg~~~~~g~r~~sV~vRGsg~g~~gY~yl~g-t~--~~-~~~id 170 (255)
T cd06900 95 FGGSLGYAQRNDGVPGFAGGWLGIGLDEYGNFSNPNEGRNGFSGRRPQSVTVRGSGSGYTGYKYITG-TG--VL-PPGID 170 (255)
T ss_pred cCcccccccccCCCCccccceEEEEEeccccccCCCCCccCCcccccceEEEECCCCCCcCceEecc-cC--CC-Ccccc
Confidence 88999997654 233456678999999987731 01211111122222211 111 122222111 11 00 00111
Q ss_pred ecC----CCcEEEEEEEeCC---CcEEEEEEccCCCCCCCCCeeeeecc---cc--cccccceEEeeeccCCcccceeEE
Q 040242 197 LKS----GDPIQAWIDYNSQ---EMLINVTISPLGIPKPHRPLISYPID---LA--TVLDEYMYVGFSASTGLLTAFHNV 264 (662)
Q Consensus 197 l~~----g~~~~~~I~Y~~~---~~~l~V~~~~~~~~~~~~~~ls~~vd---L~--~~l~~~~~vGFsastG~~~~~~~i 264 (662)
..+ ...++=+|.-|+. ...|+|.-+-.+... .. .+-..+| .. ..+|+..+++|++|||..+-.|.|
T Consensus 171 ~~~~~~~~~~hrY~i~Ids~~~~~~~vsV~R~~~~gg~-~~-~~I~~~d~~~~~~q~avP~~f~lS~TgSTGgstN~HEI 248 (255)
T cd06900 171 NNSTSTPAPGHRYRITIDSTNGDNAWLSVERDIGNGGA-YF-VVILTFDALAEQNQDAIPENFYLSFTGSTGGSTNTHEI 248 (255)
T ss_pred cCCCCCCCCceEEEEEEecCCCCceEEEEEEEccCCce-eE-EeecceeeccccCCCCCCccEEEEEEecCCCcccceee
Confidence 111 1223444444433 234556554222111 11 1222222 22 457999999999999999999999
Q ss_pred ecc
Q 040242 265 HGW 267 (662)
Q Consensus 265 ~sW 267 (662)
...
T Consensus 249 dnf 251 (255)
T cd06900 249 DNF 251 (255)
T ss_pred cce
Confidence 763
No 458
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.79 E-value=2.4e-09 Score=121.75 Aligned_cols=250 Identities=20% Similarity=0.217 Sum_probs=161.8
Q ss_pred hccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch---hhHHHHHHHHHHhhccccccceeeeeeEeccCeeeE
Q 040242 353 ATKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR---QGMKEFVAEITSMGRLRHRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 353 at~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~---~~~~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~~~l 429 (662)
..+.|.+.+-+.+|.++.++.+.-...|...+.|....... ...+....+-.++-..+||-++...--+-.....+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 34566667788888899988877666665455554322211 111111222222222334555544333344567899
Q ss_pred EEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 430 VYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 430 V~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
+++|..+++|...|+... .++.......+..+..+++|||. ..+.|+|++|.|++...++..+++|||+...
T Consensus 882 ~~~~~~~~~~~Skl~~~~-----~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~ 953 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG-----CLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSK 953 (1205)
T ss_pred hhHHhccCCchhhhhcCC-----CcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCccccccc
Confidence 999999999999987653 23333334445567789999998 6689999999999999999999999984432
Q ss_pred ccC---------------------CCC---------CcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCC
Q 040242 510 YDH---------------------NIN---------PQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRR 559 (662)
Q Consensus 510 ~~~---------------------~~~---------~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~ 559 (662)
... ... .......||+.|.+||.+.+......+|.|+.|++++|.++|..
T Consensus 954 vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen 954 VGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred cccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCC
Confidence 210 000 11233568999999999999999999999999999999999999
Q ss_pred CCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHH
Q 040242 560 PIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTR 623 (662)
Q Consensus 560 p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~ 623 (662)
||......... +++....-+. ..-..+.......++...+..+|.+|-.|.
T Consensus 1034 p~na~tpq~~f------------~ni~~~~~~~-p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1034 PFNAETPQQIF------------ENILNRDIPW-PEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCCcchhhhh------------hccccCCCCC-CCCccccChhhhhhhhhhhccCchhccCcc
Confidence 99865432110 0111111111 112223344566777778889999997766
No 459
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.75 E-value=1.1e-07 Score=96.97 Aligned_cols=141 Identities=15% Similarity=0.108 Sum_probs=100.2
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccchh-hHH----------HHHHHHHHhhccccccc--eeeeeeEec----
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQ-GMK----------EFVAEITSMGRLRHRNL--VQLHGWCRK---- 423 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~-~~~----------~f~~Ei~~l~~l~H~ni--v~l~~~~~~---- 423 (662)
+.+-.-....|++... +|+.+.||+....... ..+ .+.+|...+.++...+| .+++++.+.
T Consensus 28 e~v~~~~~rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 28 EVFRELEGRRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred cEEecCCCceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 4444444445777766 5778999987443211 111 37789998888854443 344555543
Q ss_pred -cCeeeEEEeccCCC-CcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCC------
Q 040242 424 -QDELLLVYDYVPNG-SLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDA------ 495 (662)
Q Consensus 424 -~~~~~lV~E~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~------ 495 (662)
....+||+|++++. +|.+++.+.. ....+...+..++.+++..+.-||. .+|+|+|++++|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~---~~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~ 179 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWA---TNPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGRE 179 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCC
Confidence 23578999999886 7988874321 1234456677899999999999999 89999999999999975
Q ss_pred -CCCeEEeecccccc
Q 040242 496 -DLNPKLGDFGLARA 509 (662)
Q Consensus 496 -~~~~kL~DfGla~~ 509 (662)
+..+.|+||+.++.
T Consensus 180 ~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 180 EDLKLSVIDLHRAQI 194 (268)
T ss_pred CCceEEEEECCcccc
Confidence 46799999998863
No 460
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.74 E-value=9.8e-08 Score=91.97 Aligned_cols=126 Identities=23% Similarity=0.324 Sum_probs=82.5
Q ss_pred EEEEEEeCCCCcEEEEEEeeccc--------------h------------hhHHHHHHHHHHhhcccccc--ceeeeeeE
Q 040242 370 KVYRGVIPSTGLEVAIKRVAHNS--------------R------------QGMKEFVAEITSMGRLRHRN--LVQLHGWC 421 (662)
Q Consensus 370 ~Vy~~~~~~~g~~vavK~~~~~~--------------~------------~~~~~f~~Ei~~l~~l~H~n--iv~l~~~~ 421 (662)
.||.|... +|..+|||...... + .......+|.+.|.++..-+ +.+++.+.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 38999984 67899999874421 0 01234678999999997653 45555442
Q ss_pred eccCeeeEEEeccC--CCCcchhcccccccccccccHHHHHHHHHHHHHHHHHh-HhcCCCCEEeCCcCCCceEeCCCCC
Q 040242 422 RKQDELLLVYDYVP--NGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYL-HEECDQRVVHRDVKPSNVLIDADLN 498 (662)
Q Consensus 422 ~~~~~~~lV~E~~~--~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yL-H~~~~~~ivH~Dlkp~NIll~~~~~ 498 (662)
.-.|||||++ +..+..+. ...++......++.+++..+..+ |. .+++|+||.+.||+++++ .
T Consensus 80 ----~~~ivME~I~~~G~~~~~l~-------~~~~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~-~ 144 (188)
T PF01163_consen 80 ----RNVIVMEYIGEDGVPLPRLK-------DVDLSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG-K 144 (188)
T ss_dssp ----TTEEEEE--EETTEEGGCHH-------HCGGGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT-C
T ss_pred ----CCEEEEEecCCCccchhhHH-------hccccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc-e
Confidence 3479999998 55554443 12222455667888888866664 56 899999999999999988 9
Q ss_pred eEEeecccccccc
Q 040242 499 PKLGDFGLARAYD 511 (662)
Q Consensus 499 ~kL~DfGla~~~~ 511 (662)
+.|+|||.+....
T Consensus 145 ~~iIDf~qav~~~ 157 (188)
T PF01163_consen 145 VYIIDFGQAVDSS 157 (188)
T ss_dssp EEE--GTTEEETT
T ss_pred EEEEecCcceecC
Confidence 9999999887543
No 461
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.66 E-value=7.2e-07 Score=92.76 Aligned_cols=257 Identities=19% Similarity=0.166 Sum_probs=159.3
Q ss_pred ccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcc-ccccceeeeeeE------ec-cCeeeEE
Q 040242 359 EKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRL-RHRNLVQLHGWC------RK-QDELLLV 430 (662)
Q Consensus 359 ~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l-~H~niv~l~~~~------~~-~~~~~lV 430 (662)
..+.||+|+.+.+|-.-.. + ..+-|+++........+...| |... .||-+..=+.|= -. ....-+.
T Consensus 15 ~gr~LgqGgea~ly~l~e~--~-d~VAKIYh~Pppa~~aqk~a~---la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl 88 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEV--R-DQVAKIYHAPPPAAQAQKVAE---LAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL 88 (637)
T ss_pred CCccccCCccceeeecchh--h-chhheeecCCCchHHHHHHHH---hccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence 3577999999999954331 1 234577776654433333333 3333 455444323331 11 2236788
Q ss_pred EeccCCCCcchhcccc--cccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccc
Q 040242 431 YDYVPNGSLDKLLFDN--DQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLAR 508 (662)
Q Consensus 431 ~E~~~~gsL~~~l~~~--~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~ 508 (662)
|..+++..=-..+.+. +........|...++++..+|.+.+.||. .+.+-+|++++|+|+++++.+.|.|=..-.
T Consensus 89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~---~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHE---HGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHh---cCCcccccCccceeeecCceEEEEccccee
Confidence 8888765322223222 22224568999999999999999999999 899999999999999999999998844333
Q ss_pred cccCCCCCcceecccCCcccCccccc-----CCCCCcchhHHHHHHHHHHHHcC-CCCCCcccchh--hHHHHHHHHHHh
Q 040242 509 AYDHNINPQTTHIVGTLGYLAPELTR-----TGKATTSTDVFGFGTLMLEVACG-RRPIEPQRTAM--ELVLVDWVRELH 580 (662)
Q Consensus 509 ~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~t~ksDV~S~Gvvl~elltG-~~p~~~~~~~~--~~~l~~~~~~~~ 580 (662)
...+ .......+|...|.+||.-. +..-+...|-|.+|+++++++.| +.||.+-.... ...+..- .
T Consensus 166 i~~n--g~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~----I 239 (637)
T COG4248 166 INAN--GTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETD----I 239 (637)
T ss_pred eccC--CceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhh----h
Confidence 2221 22333357889999999654 34567889999999999999986 89996432110 0000000 0
Q ss_pred hcCccccccCCCC------CCCCH-HHHHHHHHHHHHccCC--CCCCCCCHHHHHHHHh
Q 040242 581 SQGQITRAIDPTL------DYFDP-QEAELVLTLGLLCCDP--HPDFRPSTRRVVQFLL 630 (662)
Q Consensus 581 ~~~~~~~~id~~l------~~~~~-~~~~~l~~l~~~Cl~~--dP~~RPt~~eVl~~L~ 630 (662)
..+.....-+.+. ...+- -....+..|..+|+.. ++.-||+++-++..|.
T Consensus 240 a~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~ 298 (637)
T COG4248 240 AHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALD 298 (637)
T ss_pred hcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHH
Confidence 1122222222111 11221 2234567777788865 3678999998887663
No 462
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.50 E-value=4.2e-08 Score=107.95 Aligned_cols=150 Identities=19% Similarity=0.286 Sum_probs=104.6
Q ss_pred HHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCC-------c-ceecccCCcccCcccccC
Q 040242 464 IGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINP-------Q-TTHIVGTLGYLAPELTRT 535 (662)
Q Consensus 464 ~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~-------~-~~~~~gt~~y~aPE~~~~ 535 (662)
.+++.||.|+|.. .++||++|.|++|.++.++..||+.|+.+......... . ..-......|.|||++..
T Consensus 106 ~~v~dgl~flh~s--Ak~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRS--AKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccC--cceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 4456999999985 89999999999999999999999999987654432110 0 011234578999999998
Q ss_pred CCCCcchhHHHHHHHHHHHHcCCCC-CCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCC
Q 040242 536 GKATTSTDVFGFGTLMLEVACGRRP-IEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDP 614 (662)
Q Consensus 536 ~~~t~ksDV~S~Gvvl~elltG~~p-~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~ 614 (662)
...+.++|+||+||++|.+..|..+ +............ ....+.....+....+.++.+=+.+++..
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~------------~~~~~~~~~~~s~~~p~el~~~l~k~l~~ 251 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS------------RNLLNAGAFGYSNNLPSELRESLKKLLNG 251 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCcchhhhh------------hcccccccccccccCcHHHHHHHHHHhcC
Confidence 8889999999999999999954444 4332221111100 11122222233445556666667789999
Q ss_pred CCCCCCCHHHHHH
Q 040242 615 HPDFRPSTRRVVQ 627 (662)
Q Consensus 615 dP~~RPt~~eVl~ 627 (662)
++..||++.++..
T Consensus 252 ~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 252 DSAVRPTLDLLLS 264 (700)
T ss_pred CcccCcchhhhhc
Confidence 9999998887765
No 463
>PRK09902 hypothetical protein; Provisional
Probab=98.44 E-value=2.3e-06 Score=83.09 Aligned_cols=137 Identities=17% Similarity=0.170 Sum_probs=102.8
Q ss_pred eeeeCceEEEEEEeCCCCcEEEEEEeeccc------hhhHHHHHHHHHHhhcccccc--ceeeeeeEe-cc----CeeeE
Q 040242 363 VGSGGFGKVYRGVIPSTGLEVAIKRVAHNS------RQGMKEFVAEITSMGRLRHRN--LVQLHGWCR-KQ----DELLL 429 (662)
Q Consensus 363 LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~------~~~~~~f~~Ei~~l~~l~H~n--iv~l~~~~~-~~----~~~~l 429 (662)
-|+||-+.|++-.. .|..+-+|+-...- +.....|.+|+..|.+|...+ +.+++ ++. .. ..-+|
T Consensus 26 ~~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L 102 (216)
T PRK09902 26 YRRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL 102 (216)
T ss_pred cCCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence 46789999999877 45578899875211 235678999999999986433 44444 332 21 24689
Q ss_pred EEeccCC-CCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCC--eEEeeccc
Q 040242 430 VYDYVPN-GSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLN--PKLGDFGL 506 (662)
Q Consensus 430 V~E~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~--~kL~DfGl 506 (662)
|+|-+++ -+|.+++.+.. ....+..++..++.+++..+.-||+ .++.|+|+.+.||+++.++. ++++||.-
T Consensus 103 VTe~L~g~~~L~~~l~~~~---~~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDlEk 176 (216)
T PRK09902 103 VTEDMAGFISIADWYAQHA---VSPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDLEK 176 (216)
T ss_pred EEEeCCCCccHHHHHhcCC---cCCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEhhc
Confidence 9998754 67888885432 2345667788999999999999999 89999999999999986667 99999976
Q ss_pred cc
Q 040242 507 AR 508 (662)
Q Consensus 507 a~ 508 (662)
++
T Consensus 177 ~r 178 (216)
T PRK09902 177 SR 178 (216)
T ss_pred cc
Confidence 65
No 464
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.42 E-value=9.2e-07 Score=97.73 Aligned_cols=141 Identities=21% Similarity=0.294 Sum_probs=93.2
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhH----------------------------------------HHHH
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGM----------------------------------------KEFV 400 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~----------------------------------------~~f~ 400 (662)
+.|+.++-|.||+|+++ +|+.||||+.+.+-.+.. -++.
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 68999999999999995 599999999876532211 0144
Q ss_pred HHHHHhhccc-----cccceeeeeeEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHH-HHHhH
Q 040242 401 AEITSMGRLR-----HRNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQA-LLYLH 474 (662)
Q Consensus 401 ~Ei~~l~~l~-----H~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~-L~yLH 474 (662)
.|...+.+++ .+++.=-.=|.+......|+|||++|-.+.+...-. ...++ +..++..++++ +..+-
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~----~~g~d---~k~ia~~~~~~f~~q~~ 282 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALK----SAGID---RKELAELLVRAFLRQLL 282 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHH----hcCCC---HHHHHHHHHHHHHHHHH
Confidence 4555555542 233222222333345678999999999999985322 12233 22233333332 12222
Q ss_pred hcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 475 EECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 475 ~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
. .+++|.|.+|.||+++.++++.+.|||+...++.
T Consensus 283 ~---dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 283 R---DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred h---cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 2 6899999999999999999999999999987654
No 465
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.38 E-value=3.1e-06 Score=84.10 Aligned_cols=134 Identities=20% Similarity=0.248 Sum_probs=92.7
Q ss_pred cccceeeeeCceEEEEEEeCCCCcEEEEEEeeccch----------------------hhHHHHHHHHHHhhccccc--c
Q 040242 358 REKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSR----------------------QGMKEFVAEITSMGRLRHR--N 413 (662)
Q Consensus 358 ~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~----------------------~~~~~f~~Ei~~l~~l~H~--n 413 (662)
.+.++||-|--+.||.|..+ .|.++|||.-+.... .......+|.+.|.+|.-. .
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred hhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 34688999999999999996 688999995432210 0123356788888888655 5
Q ss_pred ceeeeeeEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEe
Q 040242 414 LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLI 493 (662)
Q Consensus 414 iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll 493 (662)
+.+.+++- .-.+||||+++-.|...-- +-...-.++..|++-+.-+-. .+|+|+|+++-||++
T Consensus 173 VP~P~~~n----RHaVvMe~ieG~eL~~~r~----------~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV 235 (304)
T COG0478 173 VPKPIAWN----RHAVVMEYIEGVELYRLRL----------DVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILV 235 (304)
T ss_pred CCCccccc----cceeeeehcccceeecccC----------cccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEE
Confidence 55566543 4589999998877765431 112222334444444443334 799999999999999
Q ss_pred CCCCCeEEeecccccc
Q 040242 494 DADLNPKLGDFGLARA 509 (662)
Q Consensus 494 ~~~~~~kL~DfGla~~ 509 (662)
+++|.+.++||--+..
T Consensus 236 ~~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 236 TEDGDIVVIDWPQAVP 251 (304)
T ss_pred ecCCCEEEEeCccccc
Confidence 9999999999965543
No 466
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.32 E-value=3.7e-06 Score=82.84 Aligned_cols=106 Identities=25% Similarity=0.346 Sum_probs=83.3
Q ss_pred HHHHHHHHHHhhcccccc--ceeeeeeEeccC----eeeEEEeccCCC-CcchhcccccccccccccHHHHHHHHHHHHH
Q 040242 396 MKEFVAEITSMGRLRHRN--LVQLHGWCRKQD----ELLLVYDYVPNG-SLDKLLFDNDQQKKKILNWDQRYKILIGVAQ 468 (662)
Q Consensus 396 ~~~f~~Ei~~l~~l~H~n--iv~l~~~~~~~~----~~~lV~E~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~ 468 (662)
.....+|...+.+|+... ..+.+++.+... ..++|+|++++. +|.+++.... .++...+..++.++++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~-----~~~~~~~~~ll~~l~~ 129 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE-----QLDPSQRRELLRALAR 129 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc-----ccchhhHHHHHHHHHH
Confidence 345778888888875433 455666665533 458999999884 7999885421 1555667889999999
Q ss_pred HHHHhHhcCCCCEEeCCcCCCceEeCCCC---CeEEeecccccc
Q 040242 469 ALLYLHEECDQRVVHRDVKPSNVLIDADL---NPKLGDFGLARA 509 (662)
Q Consensus 469 ~L~yLH~~~~~~ivH~Dlkp~NIll~~~~---~~kL~DfGla~~ 509 (662)
.+.-||+ .+|+|+|+++.|||++.+. .+.++||+-++.
T Consensus 130 ~i~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 130 LIAKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999999 8999999999999999887 799999997774
No 467
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.21 E-value=1.8e-05 Score=77.28 Aligned_cols=137 Identities=15% Similarity=0.200 Sum_probs=93.6
Q ss_pred ccCCcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHH---------HHHHHHHhhccccc---cceeeeeeE
Q 040242 354 TKGFREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKE---------FVAEITSMGRLRHR---NLVQLHGWC 421 (662)
Q Consensus 354 t~~f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~---------f~~Ei~~l~~l~H~---niv~l~~~~ 421 (662)
.++|...+++-......|.+... +|..+++|..........+. ..+++..+.+++.. ..+.++.+.
T Consensus 30 ~~~~~~~kv~k~~~r~~ValIei--~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 30 DNNYKIIKVFKNTKRNYVALIEI--DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred hCCceEEEeecCCCccEEEEEEE--CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 46777778888777777777776 67889999886654333222 23344445555432 233333333
Q ss_pred ec-----cCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCC
Q 040242 422 RK-----QDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDAD 496 (662)
Q Consensus 422 ~~-----~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~ 496 (662)
+. ....+++|||++|..|.++.. ++. .++..+.+++.-||+ .|+.|+|.+|.|++++.+
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~---------i~e----~~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv~~~ 171 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED---------IDE----DLAEKIVEAIKQLHK---HGFYHGDPHPGNFLVSNN 171 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh---------cCH----HHHHHHHHHHHHHHH---cCCccCCCCcCcEEEECC
Confidence 22 235679999999998877641 111 245667788999999 899999999999999865
Q ss_pred CCeEEeecccccc
Q 040242 497 LNPKLGDFGLARA 509 (662)
Q Consensus 497 ~~~kL~DfGla~~ 509 (662)
+ +++.||+..+.
T Consensus 172 ~-i~iID~~~k~~ 183 (229)
T PF06176_consen 172 G-IRIIDTQGKRM 183 (229)
T ss_pred c-EEEEECccccc
Confidence 4 99999986653
No 468
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.15 E-value=2.3e-05 Score=78.29 Aligned_cols=141 Identities=14% Similarity=0.177 Sum_probs=84.9
Q ss_pred ceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccc--eeeeeeEeccCeeeEEEeccCCCC
Q 040242 361 NLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNL--VQLHGWCRKQDELLLVYDYVPNGS 438 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~ni--v~l~~~~~~~~~~~lV~E~~~~gs 438 (662)
.+||+|..+.||+. .+..+++|...... ......+|.++++.+..-.+ .+.++++...+...+|||+++|..
T Consensus 7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~ 80 (226)
T TIGR02172 7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKR 80 (226)
T ss_pred eeecCCCCcceeEe----cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCcc
Confidence 57899999999983 24457788876533 23445789999988865444 567788777777889999998863
Q ss_pred -cchhcccccc----------------cc--cccccHHHHHH-HHH----------HHHH-HHHHhHhc-CCCCEEeCCc
Q 040242 439 -LDKLLFDNDQ----------------QK--KKILNWDQRYK-ILI----------GVAQ-ALLYLHEE-CDQRVVHRDV 486 (662)
Q Consensus 439 -L~~~l~~~~~----------------~~--~~~l~~~~~~~-i~~----------~ia~-~L~yLH~~-~~~~ivH~Dl 486 (662)
+...+..... .. ........+.. +.. .+.+ ...+|... ....++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~ 160 (226)
T TIGR02172 81 SFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDF 160 (226)
T ss_pred chhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCC
Confidence 3222211000 00 00001111000 000 0011 12222211 1245799999
Q ss_pred CCCceEeCCCCCeEEeeccccc
Q 040242 487 KPSNVLIDADLNPKLGDFGLAR 508 (662)
Q Consensus 487 kp~NIll~~~~~~kL~DfGla~ 508 (662)
.|.||++++++ +.|.||+.+.
T Consensus 161 ~~~Nii~~~~~-~~iIDwe~a~ 181 (226)
T TIGR02172 161 QIGNLITSGKG-TYWIDLGDFG 181 (226)
T ss_pred CCCcEEEcCCC-cEEEechhcC
Confidence 99999999888 9999998776
No 469
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.00 E-value=0.00013 Score=72.17 Aligned_cols=154 Identities=20% Similarity=0.202 Sum_probs=96.1
Q ss_pred cchHHHHHhccCCcccceee---eeCceEEEEEEeCCCCcEEEEEEeeccchhhHH---------H--------------
Q 040242 345 FRYSELYSATKGFREKNLVG---SGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMK---------E-------------- 398 (662)
Q Consensus 345 ~~~~el~~at~~f~~~~~LG---~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~---------~-------------- 398 (662)
.+++.+.....+..+..+.| .|.-+.||+|.. .++..+|||++........+ .
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~ 113 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA 113 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence 45566666666666665555 566678999987 56889999998654221110 0
Q ss_pred -HHHHHHHhhccc--cccceeeeeeEeccCeeeEEEeccCCCC-cchhcccccccccccccHHHHHHHHHHHHHHHHHhH
Q 040242 399 -FVAEITSMGRLR--HRNLVQLHGWCRKQDELLLVYDYVPNGS-LDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLH 474 (662)
Q Consensus 399 -f~~Ei~~l~~l~--H~niv~l~~~~~~~~~~~lV~E~~~~gs-L~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH 474 (662)
...|+..|.++. +-.+.+-+++. +-.|||||+.... -.-.|. ...+...+...+..++++.+.-|-
T Consensus 114 W~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~Lk------Dv~~e~~e~~~~~~~~v~~~~~l~ 183 (268)
T COG1718 114 WARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLK------DVPLELEEAEGLYEDVVEYMRRLY 183 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcc------cCCcCchhHHHHHHHHHHHHHHHH
Confidence 234555555553 22222333322 2379999995531 111221 122222245566667777777666
Q ss_pred hcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccC
Q 040242 475 EECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 475 ~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~ 512 (662)
.. .++||+||+.-|||+. ++.+.|+|+|-+....+
T Consensus 184 ~~--a~LVHgDLSEyNiL~~-~~~p~iID~~QaV~~~h 218 (268)
T COG1718 184 KE--AGLVHGDLSEYNILVH-DGEPYIIDVSQAVTIDH 218 (268)
T ss_pred Hh--cCcccccchhhheEEE-CCeEEEEECccccccCC
Confidence 53 7899999999999999 88999999997775543
No 470
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.97 E-value=2.7e-05 Score=86.01 Aligned_cols=144 Identities=22% Similarity=0.307 Sum_probs=93.7
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhh-------------------------------------HHHHHHH
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQG-------------------------------------MKEFVAE 402 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~-------------------------------------~~~f~~E 402 (662)
.+.||.-+.|.||+|+++. |+.||||+-+..-+.. .-+|..|
T Consensus 166 ~~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~E 244 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKE 244 (538)
T ss_pred cchhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHH
Confidence 3679999999999999965 9999999876643211 0125566
Q ss_pred HHHhhcc----cccccee---eee-eEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhH
Q 040242 403 ITSMGRL----RHRNLVQ---LHG-WCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLH 474 (662)
Q Consensus 403 i~~l~~l----~H~niv~---l~~-~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH 474 (662)
.+...+. +|-++.. +=. |........|+||||+|..+.+.-.-. ...++-. .++..+.++ |++
T Consensus 245 A~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~----~~gi~~~---~i~~~l~~~--~~~ 315 (538)
T KOG1235|consen 245 AKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAID----KRGISPH---DILNKLVEA--YLE 315 (538)
T ss_pred HHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHH----HcCCCHH---HHHHHHHHH--HHH
Confidence 6555444 3444111 111 122334679999999999998874322 2234433 333333332 333
Q ss_pred hcCCCCEEeCCcCCCceEeCC----CCCeEEeeccccccccCC
Q 040242 475 EECDQRVVHRDVKPSNVLIDA----DLNPKLGDFGLARAYDHN 513 (662)
Q Consensus 475 ~~~~~~ivH~Dlkp~NIll~~----~~~~kL~DfGla~~~~~~ 513 (662)
+....|++|+|-+|.||+++. ++.+.+-|||+.....+.
T Consensus 316 qIf~~GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is~~ 358 (538)
T KOG1235|consen 316 QIFKTGFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVISHK 358 (538)
T ss_pred HHHhcCCccCCCCCCcEEEecCCCCCccEEEEcccccccccHH
Confidence 333368999999999999984 677999999999876543
No 471
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.95 E-value=8e-05 Score=74.14 Aligned_cols=144 Identities=18% Similarity=0.176 Sum_probs=84.1
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcccccc--ceeeeeeEec---cCeeeEEEecc
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRN--LVQLHGWCRK---QDELLLVYDYV 434 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~n--iv~l~~~~~~---~~~~~lV~E~~ 434 (662)
.+.|+.|..+.||+....+ ..+++|..... .....+..|..+++.+.... +.+++.++.. ....+++|+++
T Consensus 2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i 77 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYI 77 (239)
T ss_dssp EEEEEESSSSEEEEEEETT--SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEE
T ss_pred CccCCCCCeeeEEEEEECC--cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEe
Confidence 4678999999999999843 48999987655 44566778888888886443 4566664432 23568999999
Q ss_pred CCCCcch----------------hcc---cccccccccccHHH---------HHHH------------HHHHHH-HHHHh
Q 040242 435 PNGSLDK----------------LLF---DNDQQKKKILNWDQ---------RYKI------------LIGVAQ-ALLYL 473 (662)
Q Consensus 435 ~~gsL~~----------------~l~---~~~~~~~~~l~~~~---------~~~i------------~~~ia~-~L~yL 473 (662)
++..+.. .+. .... ......+.. .... ...+.+ .+..+
T Consensus 78 ~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (239)
T PF01636_consen 78 PGRPLDDELSPEQRPELLRQLGRALAQLHQVPP-PFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQEL 156 (239)
T ss_dssp SSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHT-TCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccchhhhhhcccccc-cccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHH
Confidence 9988877 110 1100 000001000 0000 111222 33333
Q ss_pred Hhc----CCCCEEeCCcCCCceEeC-CCCCeEEeeccccc
Q 040242 474 HEE----CDQRVVHRDVKPSNVLID-ADLNPKLGDFGLAR 508 (662)
Q Consensus 474 H~~----~~~~ivH~Dlkp~NIll~-~~~~~kL~DfGla~ 508 (662)
++. ....++|+|+.|.||+++ +++.+.|.||+.+.
T Consensus 157 ~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~ 196 (239)
T PF01636_consen 157 EALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAG 196 (239)
T ss_dssp HHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-E
T ss_pred HhhhccCCCcEEEEeccccccceeeeccceeEEEecccce
Confidence 321 346799999999999999 55666799998765
No 472
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.88 E-value=5.6e-05 Score=73.12 Aligned_cols=104 Identities=25% Similarity=0.213 Sum_probs=82.8
Q ss_pred HHHHHhhcccc-ccceeeeeeEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCC
Q 040242 401 AEITSMGRLRH-RNLVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQ 479 (662)
Q Consensus 401 ~Ei~~l~~l~H-~niv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~ 479 (662)
.|.-+++.+++ +++.+++|+|- .++|.||...+++...-.. ..+-..-+|..|.+|+.++++.+.+|++....
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~--l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRP--LSQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccc--cccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 57888888876 69999999993 3679999987766532100 00123468999999999999999999987666
Q ss_pred CEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 480 RVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 480 ~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
.+.-+|++++|+-+++++++|+.|...+...
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~ 112 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVFVE 112 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcchh
Confidence 6899999999999999999999999877644
No 473
>PLN02876 acyl-CoA dehydrogenase
Probab=97.86 E-value=0.00016 Score=86.14 Aligned_cols=81 Identities=11% Similarity=0.205 Sum_probs=58.5
Q ss_pred cceeeeeCceEEEEEEeCCCC--cEEEEEEeeccc-hhhHHHHHHHHHHhhccc-cccc--eeeeeeEecc---CeeeEE
Q 040242 360 KNLVGSGGFGKVYRGVIPSTG--LEVAIKRVAHNS-RQGMKEFVAEITSMGRLR-HRNL--VQLHGWCRKQ---DELLLV 430 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g--~~vavK~~~~~~-~~~~~~f~~Ei~~l~~l~-H~ni--v~l~~~~~~~---~~~~lV 430 (662)
.+.++.|.+..+|+......+ ..+++|+..... ......+.+|+++++.+. |.++ .+++.+|.+. +..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 567899999999998774332 467778764432 122356789999999995 6665 7788888664 467999
Q ss_pred EeccCCCCcc
Q 040242 431 YDYVPNGSLD 440 (662)
Q Consensus 431 ~E~~~~gsL~ 440 (662)
|||+++..+.
T Consensus 123 ME~v~G~~~~ 132 (822)
T PLN02876 123 MEYLEGRIFV 132 (822)
T ss_pred EEecCCcccC
Confidence 9999887653
No 474
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.86 E-value=2.7e-06 Score=92.94 Aligned_cols=182 Identities=20% Similarity=0.153 Sum_probs=131.4
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcccccc-ceeeeeeEeccCeeeEEEeccCCC-
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRN-LVQLHGWCRKQDELLLVYDYVPNG- 437 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~n-iv~l~~~~~~~~~~~lV~E~~~~g- 437 (662)
-+-++++.++++||.+...+...+ ++.+... ....-++++|.+++||| .++.++-+..+...+++++++..+
T Consensus 247 fh~fvK~altknpKkRptaeklL~-h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~r 320 (829)
T KOG0576|consen 247 FHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGR 320 (829)
T ss_pred HHHHHHHHhcCCCccCCChhhhee-ceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCc
Confidence 455789999999998775443333 5555333 33456889999999999 777777777777889999999887
Q ss_pred CcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCc
Q 040242 438 SLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQ 517 (662)
Q Consensus 438 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~ 517 (662)
+-....... ...+...+...+...-++++++||+ ..=+|+| ||+..+ ...|..||+....+.... .
T Consensus 321 s~~~~~~~s----e~~~~~~~~~~~~r~et~~l~~l~~---~~~~~~d----~~l~s~-~~~~~~~~~v~~~L~~~~--~ 386 (829)
T KOG0576|consen 321 SSALEMTVS----EIALEQYQFAYPLRKETRPLAELHS---SYKVHRD----NILGSE-EEVKLLDFAVPPQLTRTM--K 386 (829)
T ss_pred cccccCChh----hHhhhhhhhhhhhhhhccccccccc---ccccCcc----cccccc-cccccccccCCcccCccc--c
Confidence 322222111 2234444555667777889999998 3347888 776655 678999999888766543 2
Q ss_pred ceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHHcCCCCC
Q 040242 518 TTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVACGRRPI 561 (662)
Q Consensus 518 ~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~elltG~~p~ 561 (662)
.....+++.++|||......+..+.|+|+.|+--.++.-|-.|-
T Consensus 387 ~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr 430 (829)
T KOG0576|consen 387 PRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPR 430 (829)
T ss_pred cccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCC
Confidence 33457899999999999999999999999998766776666654
No 475
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.84 E-value=0.00015 Score=73.28 Aligned_cols=140 Identities=18% Similarity=0.130 Sum_probs=83.9
Q ss_pred eeeeCc-eEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccc-cccceeeeeeEeccCeeeEEEeccCCCCcc
Q 040242 363 VGSGGF-GKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLR-HRNLVQLHGWCRKQDELLLVYDYVPNGSLD 440 (662)
Q Consensus 363 LG~G~~-g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~-H~niv~l~~~~~~~~~~~lV~E~~~~gsL~ 440 (662)
|-.|.. ..||+.... +..+.||+..... ..+...|+.+++.+. +--+.+++++....+..++|||+++|.+|.
T Consensus 6 ~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 80 (244)
T cd05150 6 VTEGQSGATVYRLDGK--NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAA 80 (244)
T ss_pred cCCCCCcCeEEEEcCC--CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHh
Confidence 444444 789998763 4678888875543 335667888888874 333556777777666789999999998887
Q ss_pred hhcc-------------------ccccccccccc--HHHHHHHHH--------------------HHHHHHHHhHh----
Q 040242 441 KLLF-------------------DNDQQKKKILN--WDQRYKILI--------------------GVAQALLYLHE---- 475 (662)
Q Consensus 441 ~~l~-------------------~~~~~~~~~l~--~~~~~~i~~--------------------~ia~~L~yLH~---- 475 (662)
.... .-... ..... +..+..... .+.+.+..|-.
T Consensus 81 ~~~~~~~~~~~~~~l~~~l~~lH~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 159 (244)
T cd05150 81 ALWEELEPERLVDALAEALRRLHALPVA-DCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPA 159 (244)
T ss_pred HhhcccCHHHHHHHHHHHHHHHhcCCcc-cCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCC
Confidence 5421 10000 00000 000000000 01111222211
Q ss_pred cCCCCEEeCCcCCCceEeCCCCCeEEeeccccc
Q 040242 476 ECDQRVVHRDVKPSNVLIDADLNPKLGDFGLAR 508 (662)
Q Consensus 476 ~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~ 508 (662)
.....++|+|+.|.|||++++..+.|.||+.+.
T Consensus 160 ~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 160 EEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred cCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 112569999999999999998778899998665
No 476
>PRK10593 hypothetical protein; Provisional
Probab=97.54 E-value=0.0011 Score=69.07 Aligned_cols=77 Identities=8% Similarity=-0.004 Sum_probs=56.0
Q ss_pred ccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcccc---ccceeeeeeEec---cCeeeEEEe
Q 040242 359 EKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRH---RNLVQLHGWCRK---QDELLLVYD 432 (662)
Q Consensus 359 ~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H---~niv~l~~~~~~---~~~~~lV~E 432 (662)
..+.||.|..+.||+.... ++ .+.+|..+.. .....|..|...|+.|.- -.+.+++++|.. .+..++|||
T Consensus 18 ~~~~i~~G~~~~vy~~~~~-~~-~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE 93 (297)
T PRK10593 18 RVECISEQPYAALWALYDS-QG-NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLE 93 (297)
T ss_pred eeeecCCccceeEEEEEcC-CC-CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEe
Confidence 3567999999999998763 33 4667764331 123477889999988853 357788888754 366899999
Q ss_pred ccCCCCc
Q 040242 433 YVPNGSL 439 (662)
Q Consensus 433 ~~~~gsL 439 (662)
+++++++
T Consensus 94 ~i~G~~~ 100 (297)
T PRK10593 94 RLRGVSV 100 (297)
T ss_pred ccCCEec
Confidence 9998876
No 477
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.54 E-value=0.00062 Score=79.78 Aligned_cols=199 Identities=18% Similarity=0.174 Sum_probs=134.2
Q ss_pred HHHHHHHHHhhccccccceeeeeeEeccCe----eeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHH
Q 040242 397 KEFVAEITSMGRLRHRNLVQLHGWCRKQDE----LLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLY 472 (662)
Q Consensus 397 ~~f~~Ei~~l~~l~H~niv~l~~~~~~~~~----~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~y 472 (662)
....-|++.+.++.|+|++.++.|..+... ..+..|+++..++...+.. ...++....+.+..++.+||.|
T Consensus 227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~-----v~~i~~~~~r~~~~~~~~GL~~ 301 (1351)
T KOG1035|consen 227 QTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS-----VGSIPLETLRILHQKLLEGLAY 301 (1351)
T ss_pred HHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh-----ccccCHHHHHHHHHHHhhhHHH
Confidence 344567788899999999999999866542 3455678888888887743 3457788888899999999999
Q ss_pred hHhcCCCCEEeCCcCCC---ceEeCCCCCeEEe--eccccccccCCCCCcceecccCCcccCcccccCCCCC--cchhHH
Q 040242 473 LHEECDQRVVHRDVKPS---NVLIDADLNPKLG--DFGLARAYDHNINPQTTHIVGTLGYLAPELTRTGKAT--TSTDVF 545 (662)
Q Consensus 473 LH~~~~~~ivH~Dlkp~---NIll~~~~~~kL~--DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t--~ksDV~ 545 (662)
+|+ ....|.-+..+ +.-.+.++.+.++ ||+..+.+........ ..-+..+.+||......+. ...|+|
T Consensus 302 ~h~---~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~--~~~~~~~~~~e~~~~~~~~~~r~~dL~ 376 (1351)
T KOG1035|consen 302 LHS---LSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFS--DLLAEIRNADEDLKENTAKKSRLTDLW 376 (1351)
T ss_pred HHH---hccceeEEecccccccccCccceeecchhhhcccccCCCcccchh--hcCccccccccccccccchhhhhhHHH
Confidence 999 44445444444 4444556667776 8887776554322211 2234567788877655444 447999
Q ss_pred HHHHHHHHHHcCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCCCCCCHHHHHHHHHHHHHccCCCCCCCCCHHHH
Q 040242 546 GFGTLMLEVACGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTLDYFDPQEAELVLTLGLLCCDPHPDFRPSTRRV 625 (662)
Q Consensus 546 S~Gvvl~elltG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~eV 625 (662)
.+|..+..+..|..+-....... ..++. .....+.....+|+..++++|+...++
T Consensus 377 ~lgll~~~~~~~~~i~~~~~~~~------------------~~l~~-------~~~~~~~d~~~~~~~~~~~~Rl~~~~l 431 (1351)
T KOG1035|consen 377 CLGLLLLQLSQGEDISEKSAVPV------------------SLLDV-------LSTSELLDALPKCLDEDSEERLSALEL 431 (1351)
T ss_pred HHHHHHhhhhhcCcccccccchh------------------hhhcc-------ccchhhhhhhhhhcchhhhhccchhhh
Confidence 99999999999876543221110 00000 011145566678999999999999999
Q ss_pred HHHHh
Q 040242 626 VQFLL 630 (662)
Q Consensus 626 l~~L~ 630 (662)
+.+.-
T Consensus 432 l~~~f 436 (1351)
T KOG1035|consen 432 LTHPF 436 (1351)
T ss_pred hhchh
Confidence 98653
No 478
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.54 E-value=0.00061 Score=68.51 Aligned_cols=75 Identities=16% Similarity=0.139 Sum_probs=46.4
Q ss_pred ceeeeeCce-EEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccc---cceeeeeeEecc---CeeeEEEec
Q 040242 361 NLVGSGGFG-KVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHR---NLVQLHGWCRKQ---DELLLVYDY 433 (662)
Q Consensus 361 ~~LG~G~~g-~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~---niv~l~~~~~~~---~~~~lV~E~ 433 (662)
+.|+.||.. .||+. +..+++|..... ....++..|.+.+..+... -+.++++.+... ...+++||+
T Consensus 3 ~~~~~gG~~n~vy~~-----~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~ 75 (235)
T cd05155 3 EPVDSGGTDNATFRL-----GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRW 75 (235)
T ss_pred eeccCCCcccceEEc-----CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEe
Confidence 457777776 48874 234677765442 2344678899888877532 233344444332 235889999
Q ss_pred cCCCCcchh
Q 040242 434 VPNGSLDKL 442 (662)
Q Consensus 434 ~~~gsL~~~ 442 (662)
++|.++.+.
T Consensus 76 i~G~~l~~~ 84 (235)
T cd05155 76 LEGETATAA 84 (235)
T ss_pred ecCCCCCcc
Confidence 999888644
No 479
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.41 E-value=0.0017 Score=62.92 Aligned_cols=125 Identities=29% Similarity=0.423 Sum_probs=89.5
Q ss_pred cCCcccceeeeeCc-eEEEEEEeCCCCcEEEEEEeec---cc--------h----------hhHHHHHHHHHHhhccc--
Q 040242 355 KGFREKNLVGSGGF-GKVYRGVIPSTGLEVAIKRVAH---NS--------R----------QGMKEFVAEITSMGRLR-- 410 (662)
Q Consensus 355 ~~f~~~~~LG~G~~-g~Vy~~~~~~~g~~vavK~~~~---~~--------~----------~~~~~f~~Ei~~l~~l~-- 410 (662)
..++..+.||.|.- |.|||.+. +|..+|+|.+.. .. . .....|..|.+...+|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~ 114 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA 114 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence 66778899999999 99999999 678999999322 00 0 11235888988888875
Q ss_pred -cccc--eeeeeeEeccC------------------eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHH
Q 040242 411 -HRNL--VQLHGWCRKQD------------------ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQA 469 (662)
Q Consensus 411 -H~ni--v~l~~~~~~~~------------------~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~ 469 (662)
+.++ |+++||..-.. ...||.||++... .+ ..+-+.+|.+-
T Consensus 115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~--------------~~----~~~~~~~~~~d 176 (207)
T PF13095_consen 115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP--------------PL----QIRDIPQMLRD 176 (207)
T ss_pred cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc--------------cc----chhHHHHHHHH
Confidence 4566 99999873220 2356777765433 11 12234567777
Q ss_pred HHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeecccc
Q 040242 470 LLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDFGLA 507 (662)
Q Consensus 470 L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla 507 (662)
|..+|. .+|+-+|+++.|.. .-||+|||.+
T Consensus 177 l~~~~k---~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 177 LKILHK---LGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHHH---CCeeeccCcccccc-----CCEEEecccC
Confidence 888999 89999999999986 4589999854
No 480
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.39 E-value=0.0049 Score=66.51 Aligned_cols=77 Identities=12% Similarity=0.126 Sum_probs=52.6
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeecc-----c--hhhHHHHHHHHHHhhccc---cccceeeeeeEeccCeeeE
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN-----S--RQGMKEFVAEITSMGRLR---HRNLVQLHGWCRKQDELLL 429 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~-----~--~~~~~~f~~Ei~~l~~l~---H~niv~l~~~~~~~~~~~l 429 (662)
.+.||.|.+..||+....+.++.|+||.-... . ....+.+..|.+.|..+. ..++.+++.+.. +..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE--ELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC--CCCEE
Confidence 45799999999999999643358999974321 1 123456677877777763 234666666633 55789
Q ss_pred EEeccCCCC
Q 040242 430 VYDYVPNGS 438 (662)
Q Consensus 430 V~E~~~~gs 438 (662)
||||+++..
T Consensus 109 VME~L~~~~ 117 (401)
T PRK09550 109 VMEDLSDHK 117 (401)
T ss_pred EEecCCCcc
Confidence 999998643
No 481
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.38 E-value=0.0012 Score=67.39 Aligned_cols=139 Identities=13% Similarity=0.061 Sum_probs=78.6
Q ss_pred eeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccccccce-eeeeeEeccCeeeEEEeccCCCCcch
Q 040242 363 VGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLV-QLHGWCRKQDELLLVYDYVPNGSLDK 441 (662)
Q Consensus 363 LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv-~l~~~~~~~~~~~lV~E~~~~gsL~~ 441 (662)
+..|-...+|+... ++..+++|..........-...+|..+++.+....++ +++..+. -.+||||++|..+..
T Consensus 4 ~~~G~tn~~y~~~~--~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~ 77 (256)
T TIGR02721 4 LSGGLTNRSWRIEH--PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITL 77 (256)
T ss_pred CCCcCcCCeEEEEe--CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCccccc
Confidence 45677788998874 5667888876543322111346788888888654443 3344332 368999999877753
Q ss_pred h-----------------cccccccccccccHHHHH-HHH---------HHHHHHHHHhHhc-----CCCCEEeCCcCCC
Q 040242 442 L-----------------LFDNDQQKKKILNWDQRY-KIL---------IGVAQALLYLHEE-----CDQRVVHRDVKPS 489 (662)
Q Consensus 442 ~-----------------l~~~~~~~~~~l~~~~~~-~i~---------~~ia~~L~yLH~~-----~~~~ivH~Dlkp~ 489 (662)
. ||..... ...++...+. ... ..+.+.+..+-.. ....++|+|+.|.
T Consensus 78 ~~~~~~~~~~~la~~l~~lH~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~ 156 (256)
T TIGR02721 78 DQFVALDLLLELAALLHQLHSQPRF-GYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAY 156 (256)
T ss_pred ccccCchhHHHHHHHHHHHhCCCCC-CCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcC
Confidence 2 1111100 1111211111 100 0111112222111 1246899999999
Q ss_pred ceEeCCCCCeEEeecccccc
Q 040242 490 NVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 490 NIll~~~~~~kL~DfGla~~ 509 (662)
||++++++ +.|.||..+..
T Consensus 157 Nil~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 157 NLVVTPQG-LKLIDWEYASD 175 (256)
T ss_pred cEEEeCCC-CEEEeccccCc
Confidence 99999877 78999987764
No 482
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.37 E-value=0.0019 Score=64.80 Aligned_cols=76 Identities=14% Similarity=0.141 Sum_probs=48.5
Q ss_pred cceeeeeCceEEEEEEeCC-CCcEEEEEEeeccchhhHHHHHHHHHHhhccccccce-eeeeeEeccCeeeEEEeccCCC
Q 040242 360 KNLVGSGGFGKVYRGVIPS-TGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLV-QLHGWCRKQDELLLVYDYVPNG 437 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~-~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv-~l~~~~~~~~~~~lV~E~~~~g 437 (662)
.+.|..|-...+|+..... .+..+++|......... -.-..|+.++..+...+++ ++++.+. -.++|||++|.
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~-~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~ 77 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELI-IDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGR 77 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccce-ecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCC
Confidence 3567778888999987642 25678899775432221 1224688888888544444 3443332 24799999998
Q ss_pred Ccc
Q 040242 438 SLD 440 (662)
Q Consensus 438 sL~ 440 (662)
++.
T Consensus 78 ~l~ 80 (235)
T cd05157 78 TLE 80 (235)
T ss_pred cCC
Confidence 774
No 483
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.32 E-value=0.0019 Score=62.91 Aligned_cols=129 Identities=21% Similarity=0.348 Sum_probs=88.9
Q ss_pred ccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc----------------hhhHHHHHHHHHHhhccc------ccccee
Q 040242 359 EKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS----------------RQGMKEFVAEITSMGRLR------HRNLVQ 416 (662)
Q Consensus 359 ~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~----------------~~~~~~f~~Ei~~l~~l~------H~niv~ 416 (662)
....||+|+.=.||.- + .....+||+..... ....+++.+|+....++. +.+|.+
T Consensus 5 ~~~~i~~G~~R~cy~H--P-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r 81 (199)
T PF10707_consen 5 ESDLIAQGGERDCYQH--P-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPR 81 (199)
T ss_pred CCcccccCCCceEEEC--C-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCccccccc
Confidence 3568999999999963 3 24457889886655 223456777776666555 889999
Q ss_pred eeeeEeccCeeeEEEeccCC--C----CcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCc
Q 040242 417 LHGWCRKQDELLLVYDYVPN--G----SLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSN 490 (662)
Q Consensus 417 l~~~~~~~~~~~lV~E~~~~--g----sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~N 490 (662)
++|+.+.+.-+-+|+|.+.+ | +|.+++.+ ..++. . +...+-+-..||-+ ..|+.+|++|+|
T Consensus 82 ~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~------~~~~~-~---~~~~L~~f~~~l~~---~~Iv~~dl~~~N 148 (199)
T PF10707_consen 82 FYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE------GGLTE-E---LRQALDEFKRYLLD---HHIVIRDLNPHN 148 (199)
T ss_pred EeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc------CCccH-H---HHHHHHHHHHHHHH---cCCeecCCCccc
Confidence 99999999889999997643 3 45556532 23443 2 33333344566666 789999999999
Q ss_pred eEeCCCC----CeEEee
Q 040242 491 VLIDADL----NPKLGD 503 (662)
Q Consensus 491 Ill~~~~----~~kL~D 503 (662)
|++.... .+.|.|
T Consensus 149 Iv~~~~~~~~~~lvlID 165 (199)
T PF10707_consen 149 IVVQRRDSGEFRLVLID 165 (199)
T ss_pred EEEEecCCCceEEEEEe
Confidence 9996432 466666
No 484
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.30 E-value=0.0016 Score=61.14 Aligned_cols=128 Identities=20% Similarity=0.227 Sum_probs=86.8
Q ss_pred ccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcccccccee-eeeeEeccCeeeEEEeccCCC
Q 040242 359 EKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLVQ-LHGWCRKQDELLLVYDYVPNG 437 (662)
Q Consensus 359 ~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv~-l~~~~~~~~~~~lV~E~~~~g 437 (662)
..+.|++|..|.||+|.+ .|..+|+|+-..++. ...+..|+++|..+.-.++.+ ++.|.. -++.|||..|.
T Consensus 26 v~~~L~KG~~s~Vyl~~~--~~~~~a~Kvrr~ds~--r~~l~kEakiLeil~g~~~~p~vy~yg~----~~i~me~i~G~ 97 (201)
T COG2112 26 VEKELAKGTTSVVYLGEW--RGGEVALKVRRRDSP--RRNLEKEAKILEILAGEGVTPEVYFYGE----DFIRMEYIDGR 97 (201)
T ss_pred hhhhhhcccccEEEEeec--cCceEEEEEecCCcc--hhhHHHHHHHHHHhhhcCCCceEEEech----hhhhhhhhcCc
Confidence 357799999999999999 456899998765543 357788999999988776654 444332 24559999888
Q ss_pred CcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcC-CCceEeCCCCCeEEeecccccc
Q 040242 438 SLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVK-PSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 438 sL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlk-p~NIll~~~~~~kL~DfGla~~ 509 (662)
.|.++-... +-+ -...+++.---|-. .+|-|+.|. |...+|-.+..+.|+||.-|..
T Consensus 98 ~L~~~~~~~--------~rk----~l~~vlE~a~~LD~---~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 98 PLGKLEIGG--------DRK----HLLRVLEKAYKLDR---LGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred chhhhhhcc--------cHH----HHHHHHHHHHHHHH---hccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 887765211 112 23334444223333 788888886 4444444455999999998873
No 485
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.06 E-value=0.0055 Score=63.75 Aligned_cols=145 Identities=15% Similarity=0.103 Sum_probs=86.0
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcccccc--ceeeeee------EeccCeeeEEE
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRN--LVQLHGW------CRKQDELLLVY 431 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~n--iv~l~~~------~~~~~~~~lV~ 431 (662)
.+.|..|....+|+.... +..+++|+.... ...+...|+.++..+.+.+ +.+++.. ....+..++|+
T Consensus 19 i~~i~~G~~n~~y~v~~~--~~~~vLr~~~~~---~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~ 93 (296)
T cd05153 19 FEGISAGIENTNYFVTTD--SGRYVLTLFEKV---SAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALV 93 (296)
T ss_pred eecccCccccceEEEEeC--CCcEEEEEcCCC---ChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEE
Confidence 556777877899998763 346888987642 2344566777777775433 3444332 12344678999
Q ss_pred eccCCCCcchh----c----------cccccc------ccccccHHHHHH----------HHHHHHHHHHHhHh----cC
Q 040242 432 DYVPNGSLDKL----L----------FDNDQQ------KKKILNWDQRYK----------ILIGVAQALLYLHE----EC 477 (662)
Q Consensus 432 E~~~~gsL~~~----l----------~~~~~~------~~~~l~~~~~~~----------i~~~ia~~L~yLH~----~~ 477 (662)
+|++|..+... . |..... ......|..... ....+..++.++.+ ..
T Consensus 94 ~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~ 173 (296)
T cd05153 94 EFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDL 173 (296)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcC
Confidence 99999876531 0 100000 001123322210 11123344455443 12
Q ss_pred CCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 478 DQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 478 ~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
..+++|+|+.|.||+++++..+.|.||+.+..
T Consensus 174 ~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~~ 205 (296)
T cd05153 174 PRGVIHADLFRDNVLFDGDELSGVIDFYFACT 205 (296)
T ss_pred CCcCCccCcCcccEEEeCCceEEEeehhhhcC
Confidence 35799999999999999987778999987763
No 486
>PRK05231 homoserine kinase; Provisional
Probab=97.02 E-value=0.0099 Score=62.63 Aligned_cols=145 Identities=15% Similarity=0.135 Sum_probs=76.7
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcccccc--ceeeee------eEeccCeeeEEE
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRN--LVQLHG------WCRKQDELLLVY 431 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~n--iv~l~~------~~~~~~~~~lV~ 431 (662)
.+.|..|....+|+.... +| .+++|++..... +....|+..+..|...+ +.+.+. +....+..++++
T Consensus 27 ~~~l~~G~~n~~y~v~t~-~g-~~vLK~~~~~~~---~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~ 101 (319)
T PRK05231 27 LKGIAEGIENSNFFLTTT-QG-EYVLTLFERLTA---EDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIV 101 (319)
T ss_pred cchhccccccceEEEEeC-CC-cEEEEEeccCCh---HHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEE
Confidence 355677777899998763 34 688898752222 22333444444443212 222222 122345679999
Q ss_pred eccCCCCcchh--------------ccccccc------ccccccH-HHHHHH------------H-HHHHHHHHHhHhc-
Q 040242 432 DYVPNGSLDKL--------------LFDNDQQ------KKKILNW-DQRYKI------------L-IGVAQALLYLHEE- 476 (662)
Q Consensus 432 E~~~~gsL~~~--------------l~~~~~~------~~~~l~~-~~~~~i------------~-~~ia~~L~yLH~~- 476 (662)
||++|..+... +|..... ....+.| .....- . ..+...+..+.+.
T Consensus 102 ~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 181 (319)
T PRK05231 102 TFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAA 181 (319)
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhccc
Confidence 99998765321 0110000 0001112 211111 1 1111122333211
Q ss_pred ---CCCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 477 ---CDQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 477 ---~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
...+++|+|+.+.||+++.+...-|.||+.+..
T Consensus 182 ~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~~ 217 (319)
T PRK05231 182 WPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFACN 217 (319)
T ss_pred cccCCcccCCCCCCCCcEEEECCceEEEEecccccC
Confidence 246899999999999999765568999997763
No 487
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.78 E-value=0.012 Score=61.65 Aligned_cols=145 Identities=17% Similarity=0.192 Sum_probs=81.8
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhcccccc--ceeeeeeE------eccCeeeEEE
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRN--LVQLHGWC------RKQDELLLVY 431 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~n--iv~l~~~~------~~~~~~~lV~ 431 (662)
.+.++.|-...+|+... .+| .+++|+...... ..+...|++++..|.... +.+++... ...+..++++
T Consensus 27 i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~~--~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~ 102 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTT-DVG-RYILTLYEKRVK--AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLV 102 (307)
T ss_pred ccccCCccccceEEEEe-CCC-cEEEEEecCCCC--HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEE
Confidence 45677777789998876 334 577887754311 223445666666664322 33333321 2245678999
Q ss_pred eccCCCCcchh--------------ccccccc----cc---ccccHHHHHH------------HHHHHHHHHHHhHh---
Q 040242 432 DYVPNGSLDKL--------------LFDNDQQ----KK---KILNWDQRYK------------ILIGVAQALLYLHE--- 475 (662)
Q Consensus 432 E~~~~gsL~~~--------------l~~~~~~----~~---~~l~~~~~~~------------i~~~ia~~L~yLH~--- 475 (662)
||++|..+... +|..... .. ..-.|..... ....+.+.+.++..
T Consensus 103 e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~ 182 (307)
T TIGR00938 103 EFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWP 182 (307)
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhh
Confidence 99998765321 1110000 00 0112221110 01123334555542
Q ss_pred -cCCCCEEeCCcCCCceEeCCCCCeEEeeccccc
Q 040242 476 -ECDQRVVHRDVKPSNVLIDADLNPKLGDFGLAR 508 (662)
Q Consensus 476 -~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~ 508 (662)
....+++|+|+++.||+++.++...|.||+.+.
T Consensus 183 ~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 183 RDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred hcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 234789999999999999998777899999775
No 488
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.68 E-value=0.023 Score=58.58 Aligned_cols=31 Identities=35% Similarity=0.562 Sum_probs=25.7
Q ss_pred CCEEeCCcCCCceEeCCCCC-eEEeecccccc
Q 040242 479 QRVVHRDVKPSNVLIDADLN-PKLGDFGLARA 509 (662)
Q Consensus 479 ~~ivH~Dlkp~NIll~~~~~-~kL~DfGla~~ 509 (662)
..++|+|+++.||+++++++ .-|.||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 45899999999999997555 45999997764
No 489
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.66 E-value=0.016 Score=60.51 Aligned_cols=144 Identities=21% Similarity=0.239 Sum_probs=83.5
Q ss_pred ceeeeeCceEEEEEEeCC------CCcEEEEEEeeccchhhHHHHHHHHHHhhccccccce-eeeeeEeccCeeeEEEec
Q 040242 361 NLVGSGGFGKVYRGVIPS------TGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLV-QLHGWCRKQDELLLVYDY 433 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~------~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv-~l~~~~~~~~~~~lV~E~ 433 (662)
+.|..|-...+|+..... .++.+++|....... ...+...|.+++..+....+. ++++++. + .+|+||
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~r~~E~~~~~~l~~~g~~P~~~~~~~-~---~~v~e~ 78 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVE-LLIDRERELVVFARLSERNLGPKLYGIFP-N---GRIEEF 78 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCc-ceechHHHHHHHHHHHhCCCCCceEEEeC-C---Cchhhe
Confidence 456666677899887643 257899998765432 223446788888777544444 4455543 2 358999
Q ss_pred cCCCCcchh-c----------------ccccccc------cccccHHHHHH--------------------------HHH
Q 040242 434 VPNGSLDKL-L----------------FDNDQQK------KKILNWDQRYK--------------------------ILI 464 (662)
Q Consensus 434 ~~~gsL~~~-l----------------~~~~~~~------~~~l~~~~~~~--------------------------i~~ 464 (662)
++|..+... + |...... ....-|..+.. +..
T Consensus 79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (302)
T cd05156 79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE 158 (302)
T ss_pred eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence 998877542 1 1111000 00011111111 111
Q ss_pred HHHHHHHHhHh------cCCCCEEeCCcCCCceEeCCC----CCeEEeecccccc
Q 040242 465 GVAQALLYLHE------ECDQRVVHRDVKPSNVLIDAD----LNPKLGDFGLARA 509 (662)
Q Consensus 465 ~ia~~L~yLH~------~~~~~ivH~Dlkp~NIll~~~----~~~kL~DfGla~~ 509 (662)
.+...+..|.. .....++|+|+.+.||+++++ +.++++||..+..
T Consensus 159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~ 213 (302)
T cd05156 159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASY 213 (302)
T ss_pred HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCC
Confidence 22223334432 234679999999999999985 8899999987763
No 490
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.34 E-value=0.043 Score=56.78 Aligned_cols=75 Identities=19% Similarity=0.328 Sum_probs=47.9
Q ss_pred cccceeeeeCceEEEEEEeCCCCcEEEEEEeeccchhhHHHHHHHHHHhhccc---cccceeeeeeEeccCeeeEEEecc
Q 040242 358 REKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNSRQGMKEFVAEITSMGRLR---HRNLVQLHGWCRKQDELLLVYDYV 434 (662)
Q Consensus 358 ~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~---H~niv~l~~~~~~~~~~~lV~E~~ 434 (662)
+..+.++.|....+|+.. .++..+.||.-.. .....|..|..-|+.|. --.+.+++++....+..+||+||+
T Consensus 20 ~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~~---~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l 94 (288)
T PF03881_consen 20 TSIEPVSGGDINEAYRLD--TDGGSYFVKVNSE---SGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL 94 (288)
T ss_dssp -EEEEE--SSSSEEEEEE--TTS-EEEEEEEEG---GGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred eeeEecCCCChhheEEEE--CCCccEEEEecCh---hhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence 335678888899999977 4677899998762 23346778888777773 455778899888877889999999
Q ss_pred CCC
Q 040242 435 PNG 437 (662)
Q Consensus 435 ~~g 437 (662)
+.+
T Consensus 95 ~~~ 97 (288)
T PF03881_consen 95 EMG 97 (288)
T ss_dssp ---
T ss_pred cCC
Confidence 877
No 491
>PLN02236 choline kinase
Probab=96.25 E-value=0.043 Score=58.51 Aligned_cols=144 Identities=17% Similarity=0.231 Sum_probs=82.7
Q ss_pred ceeeeeCceEEEEEEeCC----CCcEEEEEEeeccchhhHHHHHHHHHHhhccccccce-eeeeeEeccCeeeEEEeccC
Q 040242 361 NLVGSGGFGKVYRGVIPS----TGLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLV-QLHGWCRKQDELLLVYDYVP 435 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~----~g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv-~l~~~~~~~~~~~lV~E~~~ 435 (662)
+.|-.|-.-.+|+..... .++.|++|............ .+|..++..+...++. ++++.+. ++ .|+||++
T Consensus 42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR-~~E~~~~~~l~~~gl~P~~~~~~~-~g---~v~efi~ 116 (344)
T PLN02236 42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDR-DDEIRTFECMSRHGQGPRLLGRFP-NG---RVEEFIH 116 (344)
T ss_pred EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeech-HHHHHHHHHHHHcCCCCceEEEEC-Cc---eEEEeeC
Confidence 345456677889887532 23678999886654332222 5788888888655555 3555543 32 5899998
Q ss_pred CCCcchh-----------------ccccccc-ccccccHHHHHHHHHH-----------------HHHHHHHhHh-----
Q 040242 436 NGSLDKL-----------------LFDNDQQ-KKKILNWDQRYKILIG-----------------VAQALLYLHE----- 475 (662)
Q Consensus 436 ~gsL~~~-----------------l~~~~~~-~~~~l~~~~~~~i~~~-----------------ia~~L~yLH~----- 475 (662)
+.+|... +|+.... ......|.+..++..+ +...+..|.+
T Consensus 117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~ 196 (344)
T PLN02236 117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD 196 (344)
T ss_pred CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence 8777532 1111100 0111223332222211 1111222221
Q ss_pred cCCCCEEeCCcCCCceEeCC-CCCeEEeecccccc
Q 040242 476 ECDQRVVHRDVKPSNVLIDA-DLNPKLGDFGLARA 509 (662)
Q Consensus 476 ~~~~~ivH~Dlkp~NIll~~-~~~~kL~DfGla~~ 509 (662)
.....++|+|+++.|||+++ ++.+++.||..+..
T Consensus 197 ~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~ 231 (344)
T PLN02236 197 DQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY 231 (344)
T ss_pred CCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence 12356899999999999986 46799999988874
No 492
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.08 E-value=0.00091 Score=80.05 Aligned_cols=163 Identities=13% Similarity=0.007 Sum_probs=113.3
Q ss_pred HHHHHHHHhhccccccceeeeeeEe--ccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHh
Q 040242 398 EFVAEITSMGRLRHRNLVQLHGWCR--KQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHE 475 (662)
Q Consensus 398 ~f~~Ei~~l~~l~H~niv~l~~~~~--~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~ 475 (662)
..+.|...+++..|+++.....-.. +..+.+..++|+..|.+.+.|-..... ...++..-....-++......-.|.
T Consensus 1275 mll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee-~~~ld~~~v~~~~kvsvl~~~~~ls 1353 (2724)
T KOG1826|consen 1275 MLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEE-SPDLDRSPVHLRHKVSVLNRNVILS 1353 (2724)
T ss_pred hhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhcccc-CCcchhchHHHHHHHHHhccchhhh
Confidence 3455555666678888776544332 233568999999999999998655321 2333333333333332444444444
Q ss_pred cC--CCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHH
Q 040242 476 EC--DQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLE 553 (662)
Q Consensus 476 ~~--~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~e 553 (662)
.. ..-.+|+++|+-|.++..+.++|++++|+.+...+. ....+...+++.|+.|+..+.-+++.++|+|..|+-+|+
T Consensus 1354 ~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~-~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~ 1432 (2724)
T KOG1826|consen 1354 LTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPV-LSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYL 1432 (2724)
T ss_pred cccCCccchhhhhhhhccceecCCcccccccccccccCch-HhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 32 244799999999999999999999999999943332 223334567888999999888888989999999999999
Q ss_pred HHcCCCCCC
Q 040242 554 VACGRRPIE 562 (662)
Q Consensus 554 lltG~~p~~ 562 (662)
+..|..++.
T Consensus 1433 rs~~n~~fi 1441 (2724)
T KOG1826|consen 1433 RSDGNAYFI 1441 (2724)
T ss_pred HhcccHHHH
Confidence 988877654
No 493
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.03 E-value=0.071 Score=55.68 Aligned_cols=131 Identities=18% Similarity=0.208 Sum_probs=79.0
Q ss_pred ceEEEEEEeCCCCcEEEEEEee-ccchhhHHHHHHHHHHhhcccc--ccceeeeeeEeccC--eeeEEEeccCCCCcchh
Q 040242 368 FGKVYRGVIPSTGLEVAIKRVA-HNSRQGMKEFVAEITSMGRLRH--RNLVQLHGWCRKQD--ELLLVYDYVPNGSLDKL 442 (662)
Q Consensus 368 ~g~Vy~~~~~~~g~~vavK~~~-~~~~~~~~~f~~Ei~~l~~l~H--~niv~l~~~~~~~~--~~~lV~E~~~~gsL~~~ 442 (662)
.-.+|.... .++++++++-. ...........+|+..|+.+.- --+-..+++|..+. ..+.||+|++|..+...
T Consensus 38 sn~t~~~~~--~~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~ 115 (321)
T COG3173 38 SNDTFRLGD--TGQKYVLRKPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSA 115 (321)
T ss_pred ccceEEEec--CCceEEEecCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCc
Confidence 334555444 26677777221 1222333444567777777632 23345677776665 77999999988655544
Q ss_pred cccccccccccccHHHHHHHH-HHHHHHHHHhH-----------------------------------------------
Q 040242 443 LFDNDQQKKKILNWDQRYKIL-IGVAQALLYLH----------------------------------------------- 474 (662)
Q Consensus 443 l~~~~~~~~~~l~~~~~~~i~-~~ia~~L~yLH----------------------------------------------- 474 (662)
+..... . .+.+ ..+++.|.-||
T Consensus 116 ~~~~~~------~----~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~ 185 (321)
T COG3173 116 LPPESL------G----RQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIK 185 (321)
T ss_pred CCcccc------h----HHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHH
Confidence 422110 0 0111 24444444444
Q ss_pred ---hcC-----CCCEEeCCcCCCceEeCCCCCeEEeeccccccc
Q 040242 475 ---EEC-----DQRVVHRDVKPSNVLIDADLNPKLGDFGLARAY 510 (662)
Q Consensus 475 ---~~~-----~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~ 510 (662)
+.. ...++|+|+++.|++++.+.-+=+.||+++..-
T Consensus 186 Wl~~~~p~~~~~~~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 186 WLEANRPPWAGPPVLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred HHHhcCCCcCCCceeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 221 356999999999999999988999999998853
No 494
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.02 E-value=0.0078 Score=61.77 Aligned_cols=137 Identities=18% Similarity=0.148 Sum_probs=88.7
Q ss_pred CcccceeeeeCceEEEEEEeCCCCcEEEEEEeeccc---------h--------h-----hHHHHHHHHHHhhccc-ccc
Q 040242 357 FREKNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHNS---------R--------Q-----GMKEFVAEITSMGRLR-HRN 413 (662)
Q Consensus 357 f~~~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~~---------~--------~-----~~~~f~~Ei~~l~~l~-H~n 413 (662)
+...++||-|.-+.+|.+.+ ..|.+.++|.-.... + . ..-....|...|+.|. |-.
T Consensus 94 ~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf 172 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF 172 (465)
T ss_pred hhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence 56689999999999999998 468888888432110 0 0 0112345666777764 222
Q ss_pred -ceeeeeeEeccCeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceE
Q 040242 414 -LVQLHGWCRKQDELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVL 492 (662)
Q Consensus 414 -iv~l~~~~~~~~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIl 492 (662)
+.+.++++ ..++|||++.+-.|...-+- .+..+++.-+.+ -+.-|-. .++||+|..--||+
T Consensus 173 pVPkpiD~~----RH~Vvmelv~g~Pl~~v~~v--------~d~~~ly~~lm~---~Iv~la~---~GlIHgDFNEFNim 234 (465)
T KOG2268|consen 173 PVPKPIDHN----RHCVVMELVDGYPLRQVRHV--------EDPPTLYDDLMG---LIVRLAN---HGLIHGDFNEFNIM 234 (465)
T ss_pred CCCCccccc----ceeeHHHhhcccceeeeeec--------CChHHHHHHHHH---HHHHHHH---cCceecccchheeE
Confidence 33344443 45899999988888765421 222333332222 2333334 89999999999999
Q ss_pred eCCCCCeEEeeccccccccC
Q 040242 493 IDADLNPKLGDFGLARAYDH 512 (662)
Q Consensus 493 l~~~~~~kL~DfGla~~~~~ 512 (662)
++++..++++||--+....+
T Consensus 235 v~dd~~i~vIDFPQmvS~sh 254 (465)
T KOG2268|consen 235 VKDDDKIVVIDFPQMVSTSH 254 (465)
T ss_pred EecCCCEEEeechHhhccCC
Confidence 99999999999975554433
No 495
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=95.78 E-value=0.0085 Score=64.93 Aligned_cols=157 Identities=21% Similarity=0.302 Sum_probs=90.0
Q ss_pred HHHHHHHHHhhccccccceeeeeeEeccC-eeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHh
Q 040242 397 KEFVAEITSMGRLRHRNLVQLHGWCRKQD-ELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHE 475 (662)
Q Consensus 397 ~~f~~Ei~~l~~l~H~niv~l~~~~~~~~-~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~ 475 (662)
.+.+....+++.+.|+|+.+.+.+..... ...+|+|++ +-||++.+.... +.. .+++ -
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~~~~------l~~----------~s~~--~-- 85 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILKTGN------LKD----------ESLL--A-- 85 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHHhcc------cch----------hhhc--c--
Confidence 45567788899999999999988776543 478899999 889999885432 110 0111 0
Q ss_pred cCCCCEEeCCcCCCceEeCCCCCeEEeeccccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHHHHHHH
Q 040242 476 ECDQRVVHRDVKPSNVLIDADLNPKLGDFGLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTLMLEVA 555 (662)
Q Consensus 476 ~~~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvvl~ell 555 (662)
+++.|- |++ +++| -++.. | |- ...+|+|||++|.++.|+.
T Consensus 86 ---~~~~~~-----~~~-------~~td-~~~t~-----------------~--~~-----~~~pKsdVwsl~~i~~el~ 125 (725)
T KOG1093|consen 86 ---HGVLHL-----NII-------YITD-HFLTK-----------------Y--PS-----PIGPKSDVWSLGFIILELY 125 (725)
T ss_pred ---ccccee-----hhh-------hccc-ccccc-----------------C--CC-----CCCcchhhhhHHHHHHHHH
Confidence 233332 222 2233 01100 0 10 0114999999999999999
Q ss_pred cCCCCCCcccchhhHHHHHHHHHHhhcCccccccCCCC------CCCCHHHHHHHHHHHHHccCCCCCCCCCHHH
Q 040242 556 CGRRPIEPQRTAMELVLVDWVRELHSQGQITRAIDPTL------DYFDPQEAELVLTLGLLCCDPHPDFRPSTRR 624 (662)
Q Consensus 556 tG~~p~~~~~~~~~~~l~~~~~~~~~~~~~~~~id~~l------~~~~~~~~~~l~~l~~~Cl~~dP~~RPt~~e 624 (662)
-|..-+...... +.+..... ....|..+ ..+..+..+.++++...|+-..|..||...+
T Consensus 126 L~~~l~~~~~~s------~~l~~i~k----~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~ 190 (725)
T KOG1093|consen 126 LGISLEAELTES------EYLEILLK----YYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPME 190 (725)
T ss_pred HhhHHHHHHHHH------HHHHHHHH----hccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhH
Confidence 987654322111 11111111 11112111 1122345567889999999999999886443
No 496
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=95.69 E-value=0.083 Score=56.00 Aligned_cols=144 Identities=13% Similarity=0.214 Sum_probs=80.3
Q ss_pred ceeeeeCceEEEEEEeCCC---CcEEEEEEeeccchhhHHHHHHHHHHhhccccccce-eeeeeEeccCeeeEEEeccCC
Q 040242 361 NLVGSGGFGKVYRGVIPST---GLEVAIKRVAHNSRQGMKEFVAEITSMGRLRHRNLV-QLHGWCRKQDELLLVYDYVPN 436 (662)
Q Consensus 361 ~~LG~G~~g~Vy~~~~~~~---g~~vavK~~~~~~~~~~~~f~~Ei~~l~~l~H~niv-~l~~~~~~~~~~~lV~E~~~~ 436 (662)
+.|..|-...+|+....+. +..|++|.......... .-.+|..+++.+...++. ++++++ ..+ +|.+|+++
T Consensus 20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~I-dR~~E~~il~~l~~~gl~P~~l~~~-~~G---~i~~fi~g 94 (330)
T PLN02421 20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVI-DRERELQAIKYLSAAGFGAKLLGVF-GNG---MIQSFINA 94 (330)
T ss_pred EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEe-chHHHHHHHHHHHhcCCCCceeEEe-CCc---EeehhhcC
Confidence 3455566778888875432 23788998765543222 225788888888665664 455554 333 58999987
Q ss_pred CCcchh-------c----------cccccc-ccccccHHHHHHHHHH----------------------HHHHHHHhHh-
Q 040242 437 GSLDKL-------L----------FDNDQQ-KKKILNWDQRYKILIG----------------------VAQALLYLHE- 475 (662)
Q Consensus 437 gsL~~~-------l----------~~~~~~-~~~~l~~~~~~~i~~~----------------------ia~~L~yLH~- 475 (662)
..|..- + |..... ....--|....+...+ +.+-+..+..
T Consensus 95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 174 (330)
T PLN02421 95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI 174 (330)
T ss_pred CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence 766421 1 111100 0011123322222211 1111222211
Q ss_pred ----cCCCCEEeCCcCCCceEeCC-CCCeEEeecccccc
Q 040242 476 ----ECDQRVVHRDVKPSNVLIDA-DLNPKLGDFGLARA 509 (662)
Q Consensus 476 ----~~~~~ivH~Dlkp~NIll~~-~~~~kL~DfGla~~ 509 (662)
......+|+|+.+.||++++ ++.++++||..+..
T Consensus 175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag~ 213 (330)
T PLN02421 175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGSY 213 (330)
T ss_pred hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence 11235899999999999975 57899999998864
No 497
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.59 E-value=0.047 Score=53.78 Aligned_cols=31 Identities=39% Similarity=0.506 Sum_probs=22.2
Q ss_pred CCEEeCCcCCCceEe-CCCCCeEEeecccccc
Q 040242 479 QRVVHRDVKPSNVLI-DADLNPKLGDFGLARA 509 (662)
Q Consensus 479 ~~ivH~Dlkp~NIll-~~~~~~kL~DfGla~~ 509 (662)
..++|+|+.+.||++ +.++.++++||..+..
T Consensus 143 ~v~cHnDl~~~Nil~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 143 LVFCHNDLNPGNILINNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp EEEE-S--SGGGEEETSSSSCEEE--GTT-EE
T ss_pred ceEeeccCccccEEeccCCCeEEEecHHHHhh
Confidence 468999999999999 8899999999987764
No 498
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.43 E-value=0.097 Score=54.81 Aligned_cols=106 Identities=19% Similarity=0.164 Sum_probs=75.7
Q ss_pred CeeeEEEeccCCCCcchhcccccccccccccHHHHHHHHHHHHHHHHHhHhcCCCCEEeCCcCCCceEeCCCCCeEEeec
Q 040242 425 DELLLVYDYVPNGSLDKLLFDNDQQKKKILNWDQRYKILIGVAQALLYLHEECDQRVVHRDVKPSNVLIDADLNPKLGDF 504 (662)
Q Consensus 425 ~~~~lV~E~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~~ia~~L~yLH~~~~~~ivH~Dlkp~NIll~~~~~~kL~Df 504 (662)
...|++|++. +++|... +...|.+...++++.+..+.-+... -+.-|||+.-.||+++ +|++.|+||
T Consensus 299 ~y~yl~~kdh-gt~is~i---------k~~~~~e~lsff~s~~sil~~lekk--f~fehrnlt~~niLId-~GnvtLIDf 365 (488)
T COG5072 299 LYLYLHFKDH-GTPISII---------KADRSEEELSFFWSCISILDILEKK--FPFEHRNLTLDNILID-EGNVTLIDF 365 (488)
T ss_pred eEEEEEEecC-Cceeeee---------ecccHHHHHHHHHHHHHHHhhhhhc--CCcccccccccceeee-cCceEEEEe
Confidence 3567888876 6666543 3467889999999999988888774 6788999999999999 999999999
Q ss_pred cccccccCCCCCcceecccCCcccCcccccCCCCCcchhHHHHHHH
Q 040242 505 GLARAYDHNINPQTTHIVGTLGYLAPELTRTGKATTSTDVFGFGTL 550 (662)
Q Consensus 505 Gla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~t~ksDV~S~Gvv 550 (662)
-++|+--.+... .-...-.|-.+. |.-+.+-+||-+--.
T Consensus 366 klsRl~~~q~~i------sy~rldhp~lF~-G~dd~QFeIYrlMr~ 404 (488)
T COG5072 366 KLSRLSYSQGII------SYNRLDHPDLFN-GVDDYQFEIYRLMRR 404 (488)
T ss_pred eeeecccCCcee------eccccCchhhhc-CccceeeeHHHHHHH
Confidence 999953222111 111233455555 445778889875443
No 499
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=95.26 E-value=0.15 Score=53.53 Aligned_cols=32 Identities=22% Similarity=0.186 Sum_probs=28.4
Q ss_pred CCCEEeCCcCCCceEeCCCCCeEEeecccccc
Q 040242 478 DQRVVHRDVKPSNVLIDADLNPKLGDFGLARA 509 (662)
Q Consensus 478 ~~~ivH~Dlkp~NIll~~~~~~kL~DfGla~~ 509 (662)
..+++|+|+.++|++++.++.+.+.||..+..
T Consensus 195 ~~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 195 RTVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred ceeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 45799999999999999999999999987763
No 500
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.18 E-value=0.048 Score=58.51 Aligned_cols=82 Identities=15% Similarity=0.134 Sum_probs=50.1
Q ss_pred cceeeeeCceEEEEEEeCCCCcEEEEEEeecc------chhhHHHHHHHHHHhhccc--ccccee-eeeeEeccCeeeEE
Q 040242 360 KNLVGSGGFGKVYRGVIPSTGLEVAIKRVAHN------SRQGMKEFVAEITSMGRLR--HRNLVQ-LHGWCRKQDELLLV 430 (662)
Q Consensus 360 ~~~LG~G~~g~Vy~~~~~~~g~~vavK~~~~~------~~~~~~~f~~Ei~~l~~l~--H~niv~-l~~~~~~~~~~~lV 430 (662)
.+.||.|--..||++.+...+..|+||.-... -+-..++..-|.+.|+... .|..|+ ++.+ +.+...+|
T Consensus 34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v 111 (409)
T PRK12396 34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV 111 (409)
T ss_pred eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence 45789999999999998433567999964221 1223445556666666552 454444 4443 33456789
Q ss_pred EeccCC-CCcchhc
Q 040242 431 YDYVPN-GSLDKLL 443 (662)
Q Consensus 431 ~E~~~~-gsL~~~l 443 (662)
||+++. ..|++.|
T Consensus 112 MEdL~~~~ilR~~L 125 (409)
T PRK12396 112 MEDLSDHTILRTAL 125 (409)
T ss_pred HHhCcccHHHHHHH
Confidence 999864 2344443
Done!