Your job contains 1 sequence.
>040245
LANPWWTSQVGLPGMDPAAAANSSILNKRDQHQHHHHELSINDTNEEEDRDTADEPREGA
VEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNSLRSHVMEVAGGADVAESVALFARRRQRG
VCVLSGSGSVANVTLRQPAAPGAVVALHGSTGLTVYLAGGQGQVVGGSVVGQLVAAGPVM
VIAATFANATYERLPLEDDEEVTGTQGQIQSTGAATNNNNSPPQIGSSGQPPSAGLPDPS
SLTYNLPPNLIPNGGQLHEAYAWAHARPPYQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 040245
(271 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:505006460 - symbol:AHL20 "AT4G14465" species:3... 373 2.2e-34 1
TAIR|locus:2084958 - symbol:AHL19 "AT-hook motif nuclear-... 359 6.7e-33 1
TAIR|locus:2045585 - symbol:TEK "AT2G42940" species:3702 ... 224 7.6e-33 3
TAIR|locus:2099956 - symbol:AGF2 "AT-hook protein of GA f... 235 8.2e-26 2
TAIR|locus:2050946 - symbol:AHL22 "AT2G45430" species:370... 240 1.3e-23 2
TAIR|locus:2132639 - symbol:AT4G22810 "AT4G22810" species... 241 2.6e-23 2
TAIR|locus:2118051 - symbol:AT4G12050 "AT4G12050" species... 239 1.1e-22 2
TAIR|locus:2063469 - symbol:GIK "GIANT KILLER" species:37... 224 2.5e-21 2
TAIR|locus:2157007 - symbol:AT5G49700 species:3702 "Arabi... 189 1.7e-20 2
TAIR|locus:2037350 - symbol:ESC "ESCAROLA" species:3702 "... 233 1.5e-19 1
TAIR|locus:2101916 - symbol:AHL18 "AT3G60870" species:370... 230 3.1e-19 1
TAIR|locus:2129490 - symbol:AT4G17800 species:3702 "Arabi... 228 5.1e-19 1
TAIR|locus:2122148 - symbol:AGF1 "AT4G35390" species:3702... 223 1.7e-18 1
TAIR|locus:2011701 - symbol:SOB3 "SUPPRESSOR OF PHYB-4#3"... 221 2.8e-18 1
TAIR|locus:2012537 - symbol:AT1G14490 "AT1G14490" species... 171 7.0e-18 2
TAIR|locus:2084983 - symbol:AT3G04590 species:3702 "Arabi... 122 1.3e-06 3
TAIR|locus:2050766 - symbol:AT2G45850 species:3702 "Arabi... 120 8.8e-06 2
TAIR|locus:2031321 - symbol:AT1G63470 species:3702 "Arabi... 123 2.2e-05 1
TAIR|locus:2179053 - symbol:AT5G28590 "AT5G28590" species... 115 5.4e-05 1
TAIR|locus:2051038 - symbol:AT2G33620 species:3702 "Arabi... 118 7.8e-05 1
TAIR|locus:2153142 - symbol:AHL4 "AT-HOOK MOTIF NUCLEAR L... 116 0.00018 1
TAIR|locus:2167988 - symbol:AT5G62260 species:3702 "Arabi... 112 0.00051 1
TAIR|locus:2126946 - symbol:AT4G00200 species:3702 "Arabi... 110 0.00057 1
TAIR|locus:2098861 - symbol:AT3G61310 species:3702 "Arabi... 109 0.00058 2
TAIR|locus:2178505 - symbol:AT5G46640 species:3702 "Arabi... 110 0.00079 1
TAIR|locus:2122684 - symbol:AHL3 "AT-HOOK MOTIF NUCLEAR L... 110 0.00085 1
TAIR|locus:2118091 - symbol:AHL1 "AT-hook motif nuclear-l... 109 0.00092 1
TAIR|locus:2031306 - symbol:AT1G63480 species:3702 "Arabi... 109 0.00094 1
>TAIR|locus:505006460 [details] [associations]
symbol:AHL20 "AT4G14465" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0042742 "defense response to
bacterium" evidence=IMP] EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0042742 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 EMBL:BT006423
EMBL:AK118702 EMBL:AK227935 EMBL:BR000356 IPI:IPI00521749
RefSeq:NP_567432.1 UniGene:At.33280 UniGene:At.67625
ProteinModelPortal:Q8GWQ2 SMR:Q8GWQ2 IntAct:Q8GWQ2 PaxDb:Q8GWQ2
PRIDE:Q8GWQ2 EnsemblPlants:AT4G14465.1 GeneID:827093
KEGG:ath:AT4G14465 TAIR:At4g14465 eggNOG:NOG328801
InParanoid:Q8GWQ2 OMA:YERLPME PhylomeDB:Q8GWQ2
ProtClustDB:CLSN2917544 Genevestigator:Q8GWQ2 Uniprot:Q8GWQ2
Length = 281
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 81/157 (51%), Positives = 105/157 (66%)
Query: 1 LANPWWTSQVGLPGMDPAAAANSSILNKRDQHQHHHHE--LSINDT------NEEEDRDT 52
+ANPWWT+Q GL GM + S+ + HQ+HHH+ L+ D +++ D+D
Sbjct: 1 MANPWWTNQSGLAGM-----VDHSVSS--GHHQNHHHQSLLTKGDLGIAMNQSQDNDQDE 53
Query: 53 ADEPREGAVEVXXXXXXXXXXXXXXXXXXXIFVTRDSPNSLRSHVMEVAGGADVAESVAL 112
D+PREGAVEV IFVTRDSPN+LRSHV+E++ G+DVA+++A
Sbjct: 54 EDDPREGAVEVVNRRPRGRPPGSKNKPKAPIFVTRDSPNALRSHVLEISDGSDVADTIAH 113
Query: 113 FARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHG 149
F+RRRQRGVCVLSG+GSVANVTLRQ AAPG VV+L G
Sbjct: 114 FSRRRQRGVCVLSGTGSVANVTLRQAAAPGGVVSLQG 150
Score = 229 (85.7 bits), Expect = 4.0e-19, P = 4.0e-19
Identities = 70/179 (39%), Positives = 89/179 (49%)
Query: 97 VMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGSTGLTVY 156
V ++G VA +V L GV L G + ++T PG + GSTGLTVY
Sbjct: 122 VCVLSGTGSVA-NVTLRQAAAPGGVVSLQGRFEILSLT--GAFLPGP--SPPGSTGLTVY 176
Query: 157 LXXXXXXXXXXXXXXXXXXXXPVMVIAATFANATYERLPLEDDEEVTGTQGQIQSTGAAT 216
L VMVIAATF+NATYERLP+E++E+ G++ QI G +
Sbjct: 177 LAGVQGQVVGGSVVGPLLAIGSVMVIAATFSNATYERLPMEEEEDGGGSR-QIHGGGDSP 235
Query: 217 NNNNXXXXXXXXXXXXXAGLPDPSSLT---YNLPPNLIPNG-GQL-HEAYAWAHARPPY 270
+ LPD S + YN+PP+LIPNG GQL HE Y W HARPPY
Sbjct: 236 PR-------------IGSNLPDLSGMAGPGYNMPPHLIPNGAGQLGHEPYTWVHARPPY 281
>TAIR|locus:2084958 [details] [associations]
symbol:AHL19 "AT-hook motif nuclear-localized protein 19"
species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0050832 "defense response to fungus"
evidence=IMP] [GO:0000041 "transition metal ion transport"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0050832
GO:GO:0003677 EMBL:AC011437 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 UniGene:At.40820
eggNOG:NOG328801 EMBL:AY085572 EMBL:BT005882 EMBL:AK228206
EMBL:BR000355 IPI:IPI00516612 RefSeq:NP_566232.1
ProteinModelPortal:Q9SR17 STRING:Q9SR17 PaxDb:Q9SR17 PRIDE:Q9SR17
EnsemblPlants:AT3G04570.1 GeneID:819613 KEGG:ath:AT3G04570
TAIR:At3g04570 InParanoid:Q9SR17 OMA:PNALKSH PhylomeDB:Q9SR17
ProtClustDB:CLSN2917091 Genevestigator:Q9SR17 Uniprot:Q9SR17
Length = 315
Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
Identities = 84/172 (48%), Positives = 104/172 (60%)
Query: 1 LANPWWTSQVGLPGMDPAAAANSSILNKRDQH-----------QHHHHELSINDTNEEED 49
+ANPWWT QV L G++ SS L K D H +HHH +++ N ++D
Sbjct: 1 MANPWWTGQVNLSGLE-TTPPGSSQLKKPDLHISMNMAMDSGHNNHHHHQEVDNNNNDDD 59
Query: 50 RD--TAD--EPREGAVEVXXXXXXXXXXXXXXXXXXXIFVTRDSPNSLRSHVMEVAGGAD 105
RD + D EPREGAVE IFVTRDSPN+L+SHVME+A G D
Sbjct: 60 RDNLSGDDHEPREGAVEAPTRRPRGRPAGSKNKPKPPIFVTRDSPNALKSHVMEIASGTD 119
Query: 106 VAESVALFARRRQRGVCVLSGSGSVANVTLRQP------AAPG--AVVALHG 149
V E++A FARRRQRG+C+LSG+G+VANVTLRQP AAPG AV+AL G
Sbjct: 120 VIETLATFARRRQRGICILSGNGTVANVTLRQPSTAAVAAAPGGAAVLALQG 171
Score = 182 (69.1 bits), Expect = 7.8e-14, P = 7.8e-14
Identities = 57/157 (36%), Positives = 68/157 (43%)
Query: 120 GVCVLSGSGSVANVTLRQPAAPGAVVALHGSTGLTVYLXXXXXXXXXXXXXXXXXXXXPV 179
G VL+ G ++L PG A GSTGLT+YL PV
Sbjct: 163 GAAVLALQGRFEILSLTGSFLPGP--APPGSTGLTIYLAGGQGQVVGGSVVGPLMAAGPV 220
Query: 180 MVIAATFANATYERLPLEDDE--EVTGTQGQIQSTGAATNNNNXXXXXXXXXXXXXAGLP 237
M+IAATF+NATYERLPLE++E E G G GLP
Sbjct: 221 MLIAATFSNATYERLPLEEEEAAERGGGGGSGGVVPGQLGGGGSPLSSGAGGGDGNQGLP 280
Query: 238 DPSSLTYNLPPNLIPNGG-----QL--HEAYAWAHAR 267
YN+P NL+ NGG Q+ EAY WA AR
Sbjct: 281 -----VYNMPGNLVSNGGSGGGGQMSGQEAYGWAQAR 312
>TAIR|locus:2045585 [details] [associations]
symbol:TEK "AT2G42940" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0010228 "vegetative to reproductive
phase transition of meristem" evidence=IMP] [GO:0010529 "negative
regulation of transposition" evidence=IMP] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0035067 "negative regulation of
histone acetylation" evidence=IMP] [GO:1900111 "positive regulation
of histone H3-K9 dimethylation" evidence=IMP] InterPro:IPR017956
SMART:SM00384 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
EMBL:AC006580 EMBL:AC006931 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 UniGene:At.73075
EMBL:BT010721 EMBL:BT010995 EMBL:BR000352 IPI:IPI00522466
PIR:B84860 RefSeq:NP_181822.1 UniGene:At.45674
ProteinModelPortal:Q9SJG4 SMR:Q9SJG4 IntAct:Q9SJG4 PaxDb:Q9SJG4
PRIDE:Q9SJG4 EnsemblPlants:AT2G42940.1 GeneID:818895
KEGG:ath:AT2G42940 TAIR:At2g42940 eggNOG:NOG299133
InParanoid:Q9SJG4 OMA:EISSGCD PhylomeDB:Q9SJG4
ProtClustDB:CLSN2714418 ArrayExpress:Q9SJG4 Genevestigator:Q9SJG4
Uniprot:Q9SJG4
Length = 257
Score = 224 (83.9 bits), Expect = 7.6e-33, Sum P(3) = 7.6e-33
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 83 IFVTRDSPNSLRSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPG 142
I VT DSPNSLR++ +E++ G D+ E+++ FARR+QRG+C+LS +G V NVTLRQPA+ G
Sbjct: 70 IIVTHDSPNSLRANAVEISSGCDICETLSDFARRKQRGLCILSANGCVTNVTLRQPASSG 129
Query: 143 AVVALHG 149
A+V LHG
Sbjct: 130 AIVTLHG 136
Score = 103 (41.3 bits), Expect = 7.6e-33, Sum P(3) = 7.6e-33
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 149 GSTGLTVYLXXXXXXXXXXXXXXXXXXXXPVMVIAATFANATYERLPLEDDEEVTGTQGQ 208
G TGLT+YL PV+++AA+F NA ++RLP++DDE + Q
Sbjct: 155 GITGLTIYLAGPQGQVVGGGVVGGLIASGPVVLMAASFMNAVFDRLPMDDDEAASMQNQQ 214
Query: 209 IQSTG 213
G
Sbjct: 215 YYQNG 219
Score = 57 (25.1 bits), Expect = 7.6e-33, Sum P(3) = 7.6e-33
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 235 GLPDPSSLTYNLPPNLIPNGGQLHEAYAWAHAR 267
G P + LP NL+ NG + Y+W A+
Sbjct: 219 GRSRPLDDIHGLPQNLLTNGNSASDIYSWGPAQ 251
>TAIR|locus:2099956 [details] [associations]
symbol:AGF2 "AT-hook protein of GA feedback 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132975
HOGENOM:HOG000239043 InterPro:IPR005175 InterPro:IPR014476
Pfam:PF03479 PIRSF:PIRSF016021 EMBL:AY086028 EMBL:BT024777
EMBL:BR000351 IPI:IPI00516447 PIR:T47695 RefSeq:NP_191115.1
UniGene:At.35015 ProteinModelPortal:Q9M2S3 SMR:Q9M2S3 PaxDb:Q9M2S3
PRIDE:Q9M2S3 EnsemblPlants:AT3G55560.1 GeneID:824721
KEGG:ath:AT3G55560 TAIR:At3g55560 eggNOG:NOG301688
InParanoid:Q9M2S3 OMA:QKEENDD PhylomeDB:Q9M2S3
ProtClustDB:CLSN2915781 Genevestigator:Q9M2S3 Uniprot:Q9M2S3
Length = 310
Score = 235 (87.8 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 48/67 (71%), Positives = 56/67 (83%)
Query: 83 IFVTRDSPNSLRSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPG 142
+ VT++SPNSL+SHV+E+A GADVAES+ FARRR RGV VLSGSG V NVTLRQPAA G
Sbjct: 105 VVVTKESPNSLQSHVLEIATGADVAESLNAFARRRGRGVSVLSGSGLVTNVTLRQPAASG 164
Query: 143 AVVALHG 149
VV+L G
Sbjct: 165 GVVSLRG 171
Score = 160 (61.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 53/178 (29%), Positives = 74/178 (41%)
Query: 94 RSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGSTGL 153
R + V G+ + +V L GV L G + ++ G+ A + GL
Sbjct: 139 RGRGVSVLSGSGLVTNVTLRQPAASGGVVSLRGQFEILSMCGAFLPTSGSPAA---AAGL 195
Query: 154 TVYLXXXXXXXXXXXXXXXXXXXXPVMVIAATFANATYERLPLEDDEEVTGTQGQIQSTG 213
T+YL PV+VIAATF NATYERLP+E++++ Q++ G
Sbjct: 196 TIYLAGAQGQVVGGGVAGPLIASGPVIVIAATFCNATYERLPIEEEQQQEQPL-QLED-G 253
Query: 214 AATNNNNXXXXXXXXXXXXXAGLPDPSSLTYNLPPNLIPNGGQL--HEAYAWAHARPP 269
N G P YN+PPN IPNG Q+ H+ Y W PP
Sbjct: 254 KKQKEENDDNESGNNGNE---GSMQPPM--YNMPPNFIPNGHQMAQHDVY-WG-GPPP 304
Score = 72 (30.4 bits), Expect = 8.2e-26, Sum P(2) = 8.2e-26
Identities = 12/52 (23%), Positives = 28/52 (53%)
Query: 1 LANPWWTSQVGLPGMDPAAAANSSILNKRDQHQHHHHELSINDTNEEEDRDT 52
+ANPWW V + G++ +++ L+ R+ + ++ ++ +D + D T
Sbjct: 1 MANPWWVGNVAIGGVESPVTSSAPSLHHRNSNNNNPPTMTRSDPRLDHDFTT 52
>TAIR|locus:2050946 [details] [associations]
symbol:AHL22 "AT2G45430" species:3702 "Arabidopsis
thaliana" [GO:0003680 "AT DNA binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0009640 "photomorphogenesis"
evidence=IMP] [GO:0009647 "skotomorphogenesis" evidence=IMP]
[GO:0010228 "vegetative to reproductive phase transition of
meristem" evidence=IMP] [GO:0000041 "transition metal ion
transport" evidence=RCA] [GO:0010359 "regulation of anion channel
activity" evidence=RCA] [GO:0016132 "brassinosteroid biosynthetic
process" evidence=RCA] GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0009640 GO:GO:0010228 EMBL:AC002387
GO:GO:0003680 GO:GO:0009647 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 EMBL:BT014980
EMBL:BT020250 EMBL:AB493592 EMBL:BR000358 IPI:IPI00522782
PIR:D84890 RefSeq:NP_182067.1 UniGene:At.36631
ProteinModelPortal:O22130 SMR:O22130 STRING:O22130 PRIDE:O22130
EnsemblPlants:AT2G45430.1 GeneID:819151 KEGG:ath:AT2G45430
TAIR:At2g45430 eggNOG:NOG281764 InParanoid:O22130 OMA:MEVANGC
PhylomeDB:O22130 ProtClustDB:CLSN2913042 ArrayExpress:O22130
Genevestigator:O22130 Uniprot:O22130
Length = 317
Score = 240 (89.5 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 49/71 (69%), Positives = 59/71 (83%)
Query: 83 IFVTRDSPNSLRSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAA-P 141
I +TRDS N+L+SHVMEVA G DV ESV +FARRRQRG+CVLSG+G+V NVT+RQPA+ P
Sbjct: 106 IIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRGICVLSGNGAVTNVTIRQPASVP 165
Query: 142 G---AVVALHG 149
G +VV LHG
Sbjct: 166 GGGSSVVNLHG 176
Score = 169 (64.5 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 52/151 (34%), Positives = 68/151 (45%)
Query: 123 VLSGSGSVANVTLRQPAAPGAVVALHGSTGLTVYLXXXXXXXXXXXXXXXXXXXXPVMVI 182
+LS SGS L PA P A +GLT+YL PV+++
Sbjct: 180 ILSLSGSF----LPPPAPPAA-------SGLTIYLAGGQGQVVGGSVVGPLMASGPVVIM 228
Query: 183 AATFANATYERLPLEDDEEVTGTQGQIQST--GAATNNNNXXXXXXXXXXXXXAGLPDPS 240
AA+F NA YERLPLE+D++ T G + + G AT + DP+
Sbjct: 229 AASFGNAAYERLPLEEDDQEEQTAGAVANNIDGNATMGGGTQTQTQTQQQQQQQLMQDPT 288
Query: 241 SLTYNLPPNLIPNGGQLH-EAYAWAHARPPY 270
S LPPNL+ N QL EAY W RP +
Sbjct: 289 SFIQGLPPNLM-NSVQLPAEAY-WGTPRPSF 317
Score = 46 (21.3 bits), Expect = 1.3e-23, Sum P(2) = 1.3e-23
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 29 RDQHQHHHHELSINDTNEEEDRD-TADEPREGAVE 62
RD H H HH+ ++++ D+ R G ++
Sbjct: 15 RDLHLHPHHQFQHQQQQQQQNHGHDIDQHRIGGLK 49
>TAIR|locus:2132639 [details] [associations]
symbol:AT4G22810 "AT4G22810" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL161558 EMBL:AL021635 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 eggNOG:NOG281764
EMBL:AK229321 EMBL:AB493693 EMBL:BR000360 IPI:IPI00535198
PIR:T04576 RefSeq:NP_194012.1 UniGene:At.32494
ProteinModelPortal:O49662 SMR:O49662 PRIDE:O49662
EnsemblPlants:AT4G22810.1 GeneID:828380 KEGG:ath:AT4G22810
TAIR:At4g22810 InParanoid:O49662 OMA:EETSDNI PhylomeDB:O49662
ProtClustDB:CLSN2685548 Genevestigator:O49662 Uniprot:O49662
Length = 324
Score = 241 (89.9 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 46/70 (65%), Positives = 58/70 (82%)
Query: 83 IFVTRDSPNSLRSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAA-- 140
I +TRDS N+LR+HVME+ G D+ ESVA FARRRQRGVCV+SG+G+V NVT+RQP +
Sbjct: 122 IIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVCVMSGTGNVTNVTIRQPGSHP 181
Query: 141 -PGAVVALHG 149
PG+VV+LHG
Sbjct: 182 SPGSVVSLHG 191
Score = 130 (50.8 bits), Expect = 2.4e-07, Sum P(2) = 2.4e-07
Identities = 49/150 (32%), Positives = 63/150 (42%)
Query: 123 VLSGSGSVANVTLRQPAAPGAVVALHGSTGLTVYLXXXXXXXXXXXXXXXXXXXXPVMVI 182
+LS SGS L PA P A TGL+VYL PV+V+
Sbjct: 195 ILSLSGSF----LPPPAPPTA-------TGLSVYLAGGQGQVVGGSVVGPLLCAGPVVVM 243
Query: 183 AATFANATYERLPLEDDEEVTGTQGQIQSTGAATNNNNXXXXXXXXXXXXXAGLPDPSSL 242
AA+F+NA YERLPLE+DE T G G + + +G
Sbjct: 244 AASFSNAAYERLPLEEDEMQTPVHGG--GGGGSLESPPMMGQQLQHQQQAMSG------- 294
Query: 243 TYNLPPNLIPNGG--QLHEAYAWAHARPPY 270
LPPNL+ + Q H+ W+ RPPY
Sbjct: 295 HQGLPPNLLGSVQLQQQHDQSYWSTGRPPY 324
Score = 42 (19.8 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 8 SQVGLPGMDPAAAANSSILNKRDQHQH---HHHELSINDTNEEE 48
SQ LP P A L+ + Q Q HHH+ N T+ ++
Sbjct: 9 SQSSLP---PPFHARDFQLHLQQQQQEFFLHHHQQQRNQTDGDQ 49
>TAIR|locus:2118051 [details] [associations]
symbol:AT4G12050 "AT4G12050" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL049638 EMBL:AL161533 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 eggNOG:NOG281764
ProtClustDB:CLSN2685548 EMBL:BT009731 EMBL:AK228172 EMBL:AB493679
EMBL:BR000362 IPI:IPI00527206 PIR:T06612 RefSeq:NP_192942.1
UniGene:At.33511 UniGene:At.69504 ProteinModelPortal:Q9SZ70
SMR:Q9SZ70 PaxDb:Q9SZ70 PRIDE:Q9SZ70 DNASU:826813
EnsemblPlants:AT4G12050.1 GeneID:826813 KEGG:ath:AT4G12050
TAIR:At4g12050 InParanoid:Q9SZ70 OMA:NMDNIAN PhylomeDB:Q9SZ70
ArrayExpress:Q9SZ70 Genevestigator:Q9SZ70 Uniprot:Q9SZ70
Length = 339
Score = 239 (89.2 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 44/68 (64%), Positives = 57/68 (83%)
Query: 83 IFVTRDSPNSLRSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAP- 141
I +TRDS N+LR+HVME+ G D+ + +A FARRRQRGVCV+SG+GSV NVT+RQP +P
Sbjct: 135 IIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVMSGTGSVTNVTIRQPGSPP 194
Query: 142 GAVVALHG 149
G+VV+LHG
Sbjct: 195 GSVVSLHG 202
Score = 139 (54.0 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 54/152 (35%), Positives = 66/152 (43%)
Query: 123 VLSGSGSVANVTLRQPAAPGAVVALHGSTGLTVYLXXXXXXXXXXXXXXXXXXXXPVMVI 182
+LS SGS L PA P A TGL+VYL PV+V+
Sbjct: 206 ILSLSGSF----LPPPAPPAA-------TGLSVYLAGGQGQVVGGSVVGPLLCSGPVVVM 254
Query: 183 AATFANATYERLPLEDDEEVTGTQGQIQSTGAATNNNNXXXXXXXXXXXXXA---GLPDP 239
AA+F+NA YERLPLE+DE T QG G + A GLP P
Sbjct: 255 AASFSNAAYERLPLEEDEMQTPVQGGGGGGGGGGGMGSPPMMGQQQAMAAMAAAQGLP-P 313
Query: 240 SSL-TYNLPPNLIPNGGQLHEAYAWAHARPPY 270
+ L + LPP P Q + Y W+ RPPY
Sbjct: 314 NLLGSVQLPP---PQ--QNDQQY-WSTGRPPY 339
Score = 38 (18.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 8 SQVGLPGMDPAAAANSSI-LNKRDQHQHHHHE 38
SQ LP P A + + L ++ QHQ H +
Sbjct: 9 SQSSLP--PPFHARDFQLHLQQQQQHQQQHQQ 38
>TAIR|locus:2063469 [details] [associations]
symbol:GIK "GIANT KILLER" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003680 "AT DNA binding" evidence=ISS]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEP]
[GO:0048440 "carpel development" evidence=IMP] [GO:0048653 "anther
development" evidence=IMP] [GO:0000041 "transition metal ion
transport" evidence=RCA] [GO:0009733 "response to auxin stimulus"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] GO:GO:0045892 GO:GO:0005654 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0048653 EMBL:AC004667
GO:GO:0048440 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021
ProtClustDB:CLSN2686011 EMBL:BR000357 IPI:IPI00519627 PIR:E84766
RefSeq:NP_181070.1 UniGene:At.66313 ProteinModelPortal:O82166
SMR:O82166 PRIDE:O82166 EnsemblPlants:AT2G35270.1 GeneID:818094
KEGG:ath:AT2G35270 TAIR:At2g35270 eggNOG:NOG294437
InParanoid:O82166 OMA:VFECIST PhylomeDB:O82166 ArrayExpress:O82166
Genevestigator:O82166 Uniprot:O82166
Length = 285
Score = 224 (83.9 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 40/68 (58%), Positives = 55/68 (80%)
Query: 83 IFVTRDSPNSLRSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPG 142
+ VTR+S N+LR+H++EV G DV E ++ +ARRRQRG+CVLSG+G+V NV++RQP A G
Sbjct: 95 VIVTRESANTLRAHILEVGSGCDVFECISTYARRRQRGICVLSGTGTVTNVSIRQPTAAG 154
Query: 143 AVVALHGS 150
AVV L G+
Sbjct: 155 AVVTLRGT 162
Score = 108 (43.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 32/105 (30%), Positives = 46/105 (43%)
Query: 100 VAGGADVAESVALFARRRQRGVCVLSGSGSVANVT---LRQPAAPGAVVALHGSTGLTVY 156
V G +V++ V L G+ + +++ L PA PGA T LT++
Sbjct: 135 VLSGTGTVTNVSIRQPTAAGAVVTLRGTFEILSLSGSFLPPPAPPGA-------TSLTIF 187
Query: 157 LXXXXXXXXXXXXXXXXXXXXPVMVIAATFANATYERLPLEDDEE 201
L PVMV+AA+F N YERLPL++ EE
Sbjct: 188 LAGAQGQVVGGNVVGELMAAGPVMVMAASFTNVAYERLPLDEHEE 232
Score = 40 (19.1 bits), Expect = 2.5e-21, Sum P(2) = 2.5e-21
Identities = 5/6 (83%), Positives = 5/6 (83%)
Query: 32 HQHHHH 37
H HHHH
Sbjct: 40 HHHHHH 45
>TAIR|locus:2157007 [details] [associations]
symbol:AT5G49700 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 HOGENOM:HOG000239043
InterPro:IPR005175 InterPro:IPR014476 Pfam:PF03479
PIRSF:PIRSF016021 EMBL:AB025613 EMBL:AB493783 EMBL:BR000353
IPI:IPI00521619 RefSeq:NP_199781.1 UniGene:At.29772
ProteinModelPortal:Q9LTA2 EnsemblPlants:AT5G49700.1 GeneID:835033
KEGG:ath:AT5G49700 TAIR:At5g49700 eggNOG:NOG276782
InParanoid:Q9LTA2 OMA:EQKSNEM PhylomeDB:Q9LTA2
ProtClustDB:CLSN2916587 Genevestigator:Q9LTA2 Uniprot:Q9LTA2
Length = 276
Score = 189 (71.6 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 39/73 (53%), Positives = 50/73 (68%)
Query: 83 IFVTRDSPNSLRSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQP--AA 140
+FVTRD+ + +++EV G DV E++ F RR+ GVCVLSGSGSVANVTLRQP AA
Sbjct: 73 VFVTRDTDPPMSPYILEVPSGNDVVEAINRFCRRKSIGVCVLSGSGSVANVTLRQPSPAA 132
Query: 141 PGAVVALHGSTGL 153
G+ + HG L
Sbjct: 133 LGSTITFHGKFDL 145
Score = 67 (28.6 bits), Expect = 1.7e-20, Sum P(2) = 1.7e-20
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 179 VMVIAATFANATYERLPLEDDEEVTGTQGQ 208
V VIAA+F N +Y RLP E++++ + G+
Sbjct: 195 VYVIAASFNNPSYHRLPAEEEQKHSAGTGE 224
>TAIR|locus:2037350 [details] [associations]
symbol:ESC "ESCAROLA" species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0003690 "double-stranded
DNA binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006325 "chromatin organization" evidence=IMP] [GO:0010150
"leaf senescence" evidence=IMP] [GO:0009640 "photomorphogenesis"
evidence=IMP] [GO:0003680 "AT DNA binding" evidence=IDA]
InterPro:IPR017956 SMART:SM00384 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0010150 GO:GO:0009640
GO:GO:0003690 GO:GO:0006325 EMBL:AC007369 GO:GO:0003680
EMBL:AF194974 EMBL:BT006460 IPI:IPI00529897 PIR:F86341
RefSeq:NP_173514.1 UniGene:At.11202 UniGene:At.75184
ProteinModelPortal:Q9S7C9 SMR:Q9S7C9 STRING:Q9S7C9 PaxDb:Q9S7C9
PRIDE:Q9S7C9 EnsemblPlants:AT1G20900.1 GeneID:838683
KEGG:ath:AT1G20900 TAIR:At1g20900 eggNOG:NOG303772
HOGENOM:HOG000239043 InParanoid:Q9S7C9 OMA:DSRESDH PhylomeDB:Q9S7C9
ProtClustDB:CLSN2679445 Genevestigator:Q9S7C9 GermOnline:AT1G20900
InterPro:IPR005175 InterPro:IPR014476 Pfam:PF03479
PIRSF:PIRSF016021 Uniprot:Q9S7C9
Length = 311
Score = 233 (87.1 bits), Expect = 1.5e-19, P = 1.5e-19
Identities = 53/131 (40%), Positives = 70/131 (53%)
Query: 31 QHQHHHHELSINDTNEEEDRDTADEPREGAVEVXXXXXXXXXXX--------XXXXXXXX 82
QHQ H + +D + E D D ++G +
Sbjct: 43 QHQQHQQQQQPSDDSRESDHSNKDHHQQGRPDSDPNTSSSAPGKRPRGRPPGSKNKAKPP 102
Query: 83 IFVTRDSPNSLRSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPG 142
I VTRDSPN+LRSHV+EV+ GAD+ ESV+ +ARRR RGV VL G+G+V+NVTLRQP PG
Sbjct: 103 IIVTRDSPNALRSHVLEVSPGADIVESVSTYARRRGRGVSVLGGNGTVSNVTLRQPVTPG 162
Query: 143 AVVALHGSTGL 153
+ G G+
Sbjct: 163 NGGGVSGGGGV 173
Score = 111 (44.1 bits), Expect = 0.00042, P = 0.00042
Identities = 31/91 (34%), Positives = 46/91 (50%)
Query: 120 GVCVLSGSGSVANVT---LRQPAAPGAVVALHGSTGLTVYLXXXXXXXXXXXXXXXXXXX 176
GV L G + ++T L PA PGA G GL+++L
Sbjct: 172 GVVTLHGRFEILSLTGTVLPPPAPPGA-----G--GLSIFLAGGQGQVVGGSVVAPLIAS 224
Query: 177 XPVMVIAATFANATYERLPLEDDEEVTGTQG 207
PV+++AA+F+NA +ERLP+E++EE G G
Sbjct: 225 APVILMAASFSNAVFERLPIEEEEEEGGGGG 255
>TAIR|locus:2101916 [details] [associations]
symbol:AHL18 "AT3G60870" species:3702 "Arabidopsis
thaliana" [GO:0010228 "vegetative to reproductive phase transition
of meristem" evidence=IMP] EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0010228 EMBL:AL162295 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 EMBL:BR000354
IPI:IPI00534230 PIR:T47898 RefSeq:NP_191646.1 UniGene:At.54024
ProteinModelPortal:Q9LZX7 SMR:Q9LZX7 EnsemblPlants:AT3G60870.1
GeneID:825258 KEGG:ath:AT3G60870 TAIR:At3g60870 eggNOG:NOG240680
InParanoid:Q9LZX7 OMA:SANAFRC PhylomeDB:Q9LZX7
ProtClustDB:CLSN2915727 Genevestigator:Q9LZX7 Uniprot:Q9LZX7
Length = 265
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 59/144 (40%), Positives = 76/144 (52%)
Query: 15 MDPAAAANSSILNKRDQHQHHHHELSINDTN--EEED-------RDTADEPREGAVEVXX 65
MD + +++ D HQH+HH+ + EEE D A P G +
Sbjct: 1 MDEVSRSHTPQFLSSD-HQHYHHQNAGRQKRGREEEGVEPNNIGEDLATFP-SGEENIKK 58
Query: 66 XXXXXXXXXXXXXXXXXIFVTRDSPNSLRSHVMEVAGGADVAESVALFARRRQRGVCVLS 125
I VTRDS N+ R HVME+ DV ES+A+FARRRQRGVCVL+
Sbjct: 59 RRPRGRPAGSKNKPKAPIIVTRDSANAFRCHVMEITNACDVMESLAVFARRRQRGVCVLT 118
Query: 126 GSGSVANVTLRQPAAPGAVVALHG 149
G+G+V NVT+RQP G VV+LHG
Sbjct: 119 GNGAVTNVTVRQPG--GGVVSLHG 140
Score = 114 (45.2 bits), Expect = 0.00013, P = 0.00013
Identities = 47/148 (31%), Positives = 62/148 (41%)
Query: 123 VLSGSGSVANVTLRQPAAPGAVVALHGSTGLTVYLXXXXXXXXXXXXXXXXXXXXPVMVI 182
+LS SGS L PA P A +GL VYL PV+V+
Sbjct: 144 ILSLSGSF----LPPPAPPAA-------SGLKVYLAGGQGQVIGGSVVGPLTASSPVVVM 192
Query: 183 AATFANATYERLPLEDDEEVTGTQGQIQSTGAATNNNNXXXXXXXXXXXXXAGLPDPSSL 242
AA+F NA+YERLPLE++EE T+ +I A + D +S
Sbjct: 193 AASFGNASYERLPLEEEEE---TEREIDGNAARAIGTQTQKQL----------MQDATSF 239
Query: 243 TYNLPPNLIPNGGQLHEAYAWAHARPPY 270
+ P NLI + EAY W RP +
Sbjct: 240 IGS-PSNLINSVSLPGEAY-WGTQRPSF 265
>TAIR|locus:2129490 [details] [associations]
symbol:AT4G17800 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0000041 "transition metal ion
transport" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0010359 "regulation of anion channel activity"
evidence=RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL161547 EMBL:Z97344 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 EMBL:AF446359
EMBL:AY097416 EMBL:BR000359 IPI:IPI00531456 PIR:C71448
RefSeq:NP_193515.1 UniGene:At.20660 ProteinModelPortal:O23620
SMR:O23620 PRIDE:O23620 EnsemblPlants:AT4G17800.1 GeneID:827502
KEGG:ath:AT4G17800 TAIR:At4g17800 eggNOG:NOG316917
InParanoid:O23620 OMA:AHILEVT PhylomeDB:O23620
ProtClustDB:CLSN2686011 ArrayExpress:O23620 Genevestigator:O23620
Uniprot:O23620
Length = 292
Score = 228 (85.3 bits), Expect = 5.1e-19, P = 5.1e-19
Identities = 41/68 (60%), Positives = 56/68 (82%)
Query: 83 IFVTRDSPNSLRSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPG 142
+ +TR+S N+LR+H++EV G DV + VA +ARRRQRG+CVLSGSG+V NV++RQP+A G
Sbjct: 99 VIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNVSIRQPSAAG 158
Query: 143 AVVALHGS 150
AVV L G+
Sbjct: 159 AVVTLQGT 166
Score = 126 (49.4 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 46/157 (29%), Positives = 64/157 (40%)
Query: 100 VAGGADVAESVALFARRRQRGVCVLSGSGSVANVT---LRQPAAPGAVVALHGSTGLTVY 156
V G+ +V++ V L G+ + +++ L PA PGA T LT++
Sbjct: 139 VLSGSGTVTNVSIRQPSAAGAVVTLQGTFEILSLSGSFLPPPAPPGA-------TSLTIF 191
Query: 157 LXXXXXXXXXXXXXXXXXXXXPVMVIAATFANATYERLPLEDDEEVTGTQGQIQSTGAAT 216
L PV+VIAA+F N YERLPLE+DE+ Q Q G +
Sbjct: 192 LAGGQGQVVGGSVVGELTAAGPVIVIAASFTNVAYERLPLEEDEQ------QQQLGGGSN 245
Query: 217 NNNNXXXXXXXXXXXXXAGLPDPSSLTYNLPPNLIPN 253
N GLP +NLP N+ PN
Sbjct: 246 GGGNLFPEVAAGGG---GGLP-----FFNLPMNMQPN 274
>TAIR|locus:2122148 [details] [associations]
symbol:AGF1 "AT4G35390" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009938 "negative regulation of gibberellic acid mediated
signaling pathway" evidence=IEP] GO:GO:0005634 EMBL:CP002687
GO:GO:0003700 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 GO:GO:0009938
EMBL:BT014971 EMBL:BT015845 EMBL:BR000361 IPI:IPI00529108
RefSeq:NP_195265.2 UniGene:At.31419 ProteinModelPortal:Q6DBQ1
SMR:Q6DBQ1 PRIDE:Q6DBQ1 EnsemblPlants:AT4G35390.1 GeneID:829692
KEGG:ath:AT4G35390 TAIR:At4g35390 InParanoid:Q6DBQ1 OMA:FANAVYD
PhylomeDB:Q6DBQ1 ProtClustDB:CLSN2918281 Genevestigator:Q6DBQ1
Uniprot:Q6DBQ1
Length = 299
Score = 223 (83.6 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 85 VTRDSPNSLRSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAP--G 142
+TRDSPN LRSHV+EV G+D++E+V+ +A RR GVC++SG+G+V NVT+RQPAAP G
Sbjct: 82 ITRDSPNVLRSHVLEVTSGSDISEAVSTYATRRGCGVCIISGTGAVTNVTIRQPAAPAGG 141
Query: 143 AVVALHG 149
V+ LHG
Sbjct: 142 GVITLHG 148
Score = 119 (46.9 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 36/96 (37%), Positives = 47/96 (48%)
Query: 120 GVCVLSGSGSVANVT---LRQPAAPGAVVALHGSTGLTVYLXXXXXXXXXXXXXXXXXXX 176
GV L G + ++T L PA PGA G GLTVYL
Sbjct: 142 GVITLHGRFDILSLTGTALPPPAPPGA-----G--GLTVYLAGGQGQVVGGNVAGSLIAS 194
Query: 177 XPVMVIAATFANATYERLPLEDDE----EVTGTQGQ 208
PV+++AA+FANA Y+RLP+E++E TG Q Q
Sbjct: 195 GPVVLMAASFANAVYDRLPIEEEETPPPRTTGVQQQ 230
>TAIR|locus:2011701 [details] [associations]
symbol:SOB3 "SUPPRESSOR OF PHYB-4#3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0009640 "photomorphogenesis" evidence=RCA;IMP] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0009845 "seed germination" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0009933
"meristem structural organization" evidence=RCA] [GO:0010162 "seed
dormancy process" evidence=RCA] [GO:0010182 "sugar mediated
signaling pathway" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017956 SMART:SM00384 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0003677 GO:GO:0009640 EMBL:AC015450
HOGENOM:HOG000239043 ProtClustDB:CLSN2679445 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 EMBL:BR000365
IPI:IPI00530632 PIR:H96792 RefSeq:NP_177776.1 UniGene:At.7934
ProteinModelPortal:Q9C9K7 SMR:Q9C9K7 STRING:Q9C9K7 PRIDE:Q9C9K7
EnsemblPlants:AT1G76500.1 GeneID:843983 KEGG:ath:AT1G76500
TAIR:At1g76500 eggNOG:NOG321476 InParanoid:Q9C9K7 OMA:HGANGGT
PhylomeDB:Q9C9K7 Genevestigator:Q9C9K7 Uniprot:Q9C9K7
Length = 302
Score = 221 (82.9 bits), Expect = 2.8e-18, P = 2.8e-18
Identities = 47/75 (62%), Positives = 57/75 (76%)
Query: 83 IFVTRDSPNSLRSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPG 142
+ VTRDSPN LRSHV+EV+ GAD+ ESV +ARRR RGV +LSG+G+VANV+LRQPA
Sbjct: 89 VIVTRDSPNVLRSHVLEVSSGADIVESVTTYARRRGRGVSILSGNGTVANVSLRQPATTA 148
Query: 143 AVVALHGSTGLTVYL 157
A A +G TG V L
Sbjct: 149 AHGA-NGGTGGVVAL 162
Score = 113 (44.8 bits), Expect = 0.00023, P = 0.00023
Identities = 32/97 (32%), Positives = 47/97 (48%)
Query: 120 GVCVLSGSGSVANVT---LRQPAAPGAVVALHGSTGLTVYLXXXXXXXXXXXXXXXXXXX 176
GV L G + ++T L PA PG S GL+++L
Sbjct: 158 GVVALHGRFEILSLTGTVLPPPAPPG-------SGGLSIFLSGVQGQVIGGNVVAPLVAS 210
Query: 177 XPVMVIAATFANATYERLPLEDDEEVTGTQGQIQSTG 213
PV+++AA+F+NAT+ERLPLED+ G G++ G
Sbjct: 211 GPVILMAASFSNATFERLPLEDEGGEGGEGGEVGEGG 247
>TAIR|locus:2012537 [details] [associations]
symbol:AT1G14490 "AT1G14490" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0003677
EMBL:AC012188 HOGENOM:HOG000239043 InterPro:IPR005175
InterPro:IPR014476 Pfam:PF03479 PIRSF:PIRSF016021 EMBL:BT029503
EMBL:AB493457 EMBL:BR000364 IPI:IPI00543152 PIR:G86279
RefSeq:NP_172901.1 UniGene:At.49445 ProteinModelPortal:Q9M9R4
EnsemblPlants:AT1G14490.1 GeneID:838011 KEGG:ath:AT1G14490
TAIR:At1g14490 eggNOG:NOG314566 InParanoid:Q9M9R4 OMA:TIDPPMS
PhylomeDB:Q9M9R4 ProtClustDB:CLSN2682952 Genevestigator:Q9M9R4
Uniprot:Q9M9R4
Length = 206
Score = 171 (65.3 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 39/73 (53%), Positives = 48/73 (65%)
Query: 83 IFVTRDSPNSLRSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQP--AA 140
IFVT D P S +++EV G DV E++ F R + G CVLSGSGSVA+VTLRQP AA
Sbjct: 22 IFVTIDPPMS--PYILEVPSGNDVVEALNRFCRGKAIGFCVLSGSGSVADVTLRQPSPAA 79
Query: 141 PGAVVALHGSTGL 153
PG+ + HG L
Sbjct: 80 PGSTITFHGKFDL 92
Score = 60 (26.2 bits), Expect = 7.0e-18, Sum P(2) = 7.0e-18
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 179 VMVIAATFANATYERLPLEDDEEVTGTQGQ 208
V +A +F N +Y RLP ++E+ +G+
Sbjct: 142 VYFVATSFKNPSYHRLPATEEEQRNSAEGE 171
>TAIR|locus:2084983 [details] [associations]
symbol:AT3G04590 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017956 Pfam:PF02178 SMART:SM00384
EMBL:CP002686 GO:GO:0003677 InterPro:IPR005175 Pfam:PF03479
EMBL:BT029764 EMBL:AB493600 IPI:IPI00529282 RefSeq:NP_187109.2
UniGene:At.19818 ProteinModelPortal:A1L4X7 SMR:A1L4X7 PRIDE:A1L4X7
EnsemblPlants:AT3G04590.2 GeneID:819615 KEGG:ath:AT3G04590
TAIR:At3g04590 OMA:GHESSEN PhylomeDB:A1L4X7 Genevestigator:Q3E6V9
Uniprot:A1L4X7
Length = 411
Score = 122 (48.0 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 21/54 (38%), Positives = 35/54 (64%)
Query: 96 HVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHG 149
H++ +A G DV + + +FA + + +CVLS SG+++N +LRQPA G + G
Sbjct: 174 HIVNIAPGEDVVQKIMMFANQSKHELCVLSASGTISNASLRQPAPSGGNLPYEG 227
Score = 40 (19.1 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 16/65 (24%), Positives = 24/65 (36%)
Query: 150 STGLTVYLXXXXXXXXXXXXXXXXXXXXPVMVIAATFANATYERLPLEDDEEVTGTQGQI 209
S GL+V L PV VI TF +L + D +G +G
Sbjct: 247 SGGLSVSLSASDGQIIGGAIGSHLTAAGPVQVILGTF------QLDRKKDAAGSGGKGDA 300
Query: 210 QSTGA 214
++G+
Sbjct: 301 SNSGS 305
Score = 39 (18.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 6/7 (85%), Positives = 6/7 (85%)
Query: 31 QHQHHHH 37
Q QHHHH
Sbjct: 39 QLQHHHH 45
Score = 36 (17.7 bits), Expect = 2.6e-06, Sum P(3) = 2.6e-06
Identities = 4/25 (16%), Positives = 15/25 (60%)
Query: 26 LNKRDQHQHHHHELSINDTNEEEDR 50
++ + H HHH + ++ ++++ +
Sbjct: 1 MDPNESH-HHHQQQQLHHLHQQQQQ 24
>TAIR|locus:2050766 [details] [associations]
symbol:AT2G45850 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0010103 "stomatal complex morphogenesis" evidence=RCA]
InterPro:IPR017956 SMART:SM00384 GO:GO:0005634 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0003677 EMBL:AC004665
InterPro:IPR005175 Pfam:PF03479 UniGene:At.12707 UniGene:At.48596
HOGENOM:HOG000116506 EMBL:AF367271 EMBL:AY059157 EMBL:AY062699
EMBL:AY114678 EMBL:BR000345 IPI:IPI00548851 PIR:T02462
RefSeq:NP_182109.1 RefSeq:NP_850442.1 ProteinModelPortal:O80834
SMR:O80834 IntAct:O80834 PaxDb:O80834 PRIDE:O80834
EnsemblPlants:AT2G45850.1 EnsemblPlants:AT2G45850.2 GeneID:819193
KEGG:ath:AT2G45850 TAIR:At2g45850 eggNOG:NOG246569
InParanoid:O80834 OMA:TITPNNS PhylomeDB:O80834
ProtClustDB:CLSN2683445 ArrayExpress:O80834 Genevestigator:O80834
Uniprot:O80834
Length = 348
Score = 120 (47.3 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 92 SLRSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAA-PGAV 144
S HV+ V+ G D+A V F+++ R +CVLS SG+V+ TL QP+A PGA+
Sbjct: 161 SFTPHVIAVSIGEDIASKVIAFSQQGPRAICVLSASGAVSTATLIQPSASPGAI 214
Score = 41 (19.5 bits), Expect = 8.8e-06, Sum P(2) = 8.8e-06
Identities = 21/82 (25%), Positives = 29/82 (35%)
Query: 144 VVALHGS----TG-LTVYLXXXXXXXXXXXXXXXXXXXXPVMVIAATFANATYERLPLED 198
+VA GS TG L+V L PV VI +F A + +
Sbjct: 230 IVATDGSFRNRTGNLSVSLASPDGRVIGGAIGGPLIAASPVQVIVGSFIWAAPKIKSKKR 289
Query: 199 DEEVTGTQGQIQSTGAATNNNN 220
+EE + + NNNN
Sbjct: 290 EEEASEVVQETDDHHVLDNNNN 311
>TAIR|locus:2031321 [details] [associations]
symbol:AT1G63470 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0000226 "microtubule cytoskeleton organization" evidence=RCA]
[GO:0000280 "nuclear division" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007000 "nucleolus organization" evidence=RCA]
[GO:0007267 "cell-cell signaling" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0016571 "histone methylation" evidence=RCA] [GO:0016572
"histone phosphorylation" evidence=RCA] [GO:0031047 "gene silencing
by RNA" evidence=RCA] [GO:0031048 "chromatin silencing by small
RNA" evidence=RCA] [GO:0034968 "histone lysine methylation"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0048449 "floral organ
formation" evidence=RCA] [GO:0051225 "spindle assembly"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017956 SMART:SM00384 EMBL:CP002684 GO:GO:0003677
InterPro:IPR005175 Pfam:PF03479 eggNOG:NOG246569 EMBL:BT005545
EMBL:AK118329 EMBL:BR000341 IPI:IPI00536298 RefSeq:NP_176536.2
UniGene:At.36125 UniGene:At.73033 ProteinModelPortal:Q8GXB3
IntAct:Q8GXB3 STRING:Q8GXB3 PaxDb:Q8GXB3 PRIDE:Q8GXB3
EnsemblPlants:AT1G63470.1 GeneID:842653 KEGG:ath:AT1G63470
TAIR:At1g63470 InParanoid:Q8GXB3 OMA:EPTNSEM PhylomeDB:Q8GXB3
ProtClustDB:CLSN2690476 ArrayExpress:Q8GXB3 Genevestigator:Q8GXB3
Uniprot:Q8GXB3
Length = 378
Score = 123 (48.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 21/54 (38%), Positives = 36/54 (66%)
Query: 96 HVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHG 149
HV+ V G D+ V F+++R R +C++SG+G+V++VTLR+PA+ + G
Sbjct: 180 HVISVGSGEDIVSKVLSFSQKRPRALCIMSGTGTVSSVTLREPASTTPSLTFEG 233
>TAIR|locus:2179053 [details] [associations]
symbol:AT5G28590 "AT5G28590" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 IPI:IPI00539891 RefSeq:NP_198211.1
UniGene:At.55073 ProteinModelPortal:F4K8J6
EnsemblPlants:AT5G28590.1 GeneID:832956 KEGG:ath:AT5G28590
OMA:HTITSSA GO:GO:0003677 InterPro:IPR005175 Pfam:PF03479
Uniprot:F4K8J6
Length = 216
Score = 115 (45.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 29/93 (31%), Positives = 44/93 (47%)
Query: 96 HVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGST--GL 153
H++ + G DVAE + LF ++ + +CVLS SGS++N +L A+ + HG GL
Sbjct: 33 HIVNITPGEDVAEKIVLFTQQSKHQLCVLSASGSISNASLSHLASGTS----HGGKTGGL 88
Query: 154 TVYLXXXXXXXXXXXXXXXXXXXXPVMVIAATF 186
+V L PV V+ TF
Sbjct: 89 SVCLSNSDGQIFGGGVGGLLKAAGPVQVVLGTF 121
>TAIR|locus:2051038 [details] [associations]
symbol:AT2G33620 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0048438 "floral whorl development" evidence=RCA]
[GO:0048439 "flower morphogenesis" evidence=RCA] InterPro:IPR017956
SMART:SM00384 GO:GO:0005829 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 EMBL:AC002332 InterPro:IPR005175 Pfam:PF03479
EMBL:AY081729 EMBL:BR000346 IPI:IPI00516597 PIR:G84747
RefSeq:NP_001118437.1 RefSeq:NP_565769.1 RefSeq:NP_850215.1
RefSeq:NP_973590.1 UniGene:At.48546 UniGene:At.49689
UniGene:At.64420 ProteinModelPortal:O22812 SMR:O22812 STRING:O22812
PaxDb:O22812 PRIDE:O22812 EnsemblPlants:AT2G33620.1
EnsemblPlants:AT2G33620.2 EnsemblPlants:AT2G33620.3
EnsemblPlants:AT2G33620.4 GeneID:817928 KEGG:ath:AT2G33620
TAIR:At2g33620 eggNOG:NOG315719 HOGENOM:HOG000116506
InParanoid:O22812 OMA:SENGGHR PhylomeDB:O22812
ProtClustDB:CLSN2688664 ArrayExpress:O22812 Genevestigator:O22812
Uniprot:O22812
Length = 351
Score = 118 (46.6 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 96 HVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHG 149
HV+ V G DV+ + R VCVLS +G+++NVTLRQ A G V G
Sbjct: 166 HVLTVLAGEDVSSKIMALTHNGPRAVCVLSANGAISNVTLRQSATSGGTVTYEG 219
>TAIR|locus:2153142 [details] [associations]
symbol:AHL4 "AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 4"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010089 "xylem
development" evidence=IMP] InterPro:IPR017956 SMART:SM00384
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 EMBL:AB018109
InterPro:IPR005175 Pfam:PF03479 HOGENOM:HOG000116506 EMBL:AB493788
EMBL:BR000340 IPI:IPI00523440 RefSeq:NP_199972.1 UniGene:At.46739
ProteinModelPortal:Q9FHM5 SMR:Q9FHM5 PaxDb:Q9FHM5 PRIDE:Q9FHM5
EnsemblPlants:AT5G51590.1 GeneID:835233 KEGG:ath:AT5G51590
TAIR:At5g51590 eggNOG:NOG322801 InParanoid:Q9FHM5 OMA:HEPSTNT
PhylomeDB:Q9FHM5 ProtClustDB:CLSN2685677 Genevestigator:Q9FHM5
Uniprot:Q9FHM5
Length = 419
Score = 116 (45.9 bits), Expect = 0.00018, P = 0.00018
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 89 SPNSLRSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALH 148
SP S HV+ V G DV + F+++ R +C+LS +G ++NVTLRQ G +
Sbjct: 175 SP-SFTPHVLTVNAGEDVTMKIMTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYE 233
Query: 149 G 149
G
Sbjct: 234 G 234
>TAIR|locus:2167988 [details] [associations]
symbol:AT5G62260 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR017956 Pfam:PF02178
SMART:SM00384 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
EMBL:AB019235 InterPro:IPR005175 Pfam:PF03479 HOGENOM:HOG000116506
EMBL:BT005681 EMBL:AK118328 EMBL:BR000342 IPI:IPI00545024
RefSeq:NP_201032.2 UniGene:At.29059 ProteinModelPortal:Q9LVB0
SMR:Q9LVB0 IntAct:Q9LVB0 PRIDE:Q9LVB0 EnsemblPlants:AT5G62260.1
GeneID:836347 KEGG:ath:AT5G62260 TAIR:At5g62260 eggNOG:NOG283759
InParanoid:Q9LVB0 PhylomeDB:Q9LVB0 ProtClustDB:CLSN2918888
ArrayExpress:Q9LVB0 Genevestigator:Q9LVB0 Uniprot:Q9LVB0
Length = 404
Score = 112 (44.5 bits), Expect = 0.00051, P = 0.00051
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 95 SHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHG 149
+H V GG DV V ++++ R +C+LS +GS++NVTL QP G + G
Sbjct: 162 THQFTVNGGEDVTMKVMPYSQQGSRAICILSATGSISNVTLGQPTNAGGTLTYEG 216
>TAIR|locus:2126946 [details] [associations]
symbol:AT4G00200 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017956 SMART:SM00384 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 InterPro:IPR005175
Pfam:PF03479 HOGENOM:HOG000116506 EMBL:BT023416 EMBL:AK228631
IPI:IPI00518846 RefSeq:NP_191931.2 UniGene:At.34588
ProteinModelPortal:Q4V3E0 SMR:Q4V3E0 PRIDE:Q4V3E0
EnsemblPlants:AT4G00200.1 GeneID:828162 KEGG:ath:AT4G00200
TAIR:At4g00200 OMA:SATDINI PhylomeDB:Q4V3E0 ProtClustDB:CLSN2920282
Genevestigator:Q4V3E0 Uniprot:Q4V3E0
Length = 318
Score = 110 (43.8 bits), Expect = 0.00057, P = 0.00057
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 96 HVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHG 149
HV+ V G D+ + F+++ R +C+LS +G ++NVTLRQP + G + G
Sbjct: 126 HVITVNTGEDITMRIISFSQQGPRAICILSANGVISNVTLRQPDSCGGTLTYEG 179
>TAIR|locus:2098861 [details] [associations]
symbol:AT3G61310 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017956 SMART:SM00384 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 InterPro:IPR005175
Pfam:PF03479 HOGENOM:HOG000116506 ProtClustDB:CLSN2683445
EMBL:AY128386 EMBL:BT008837 EMBL:BR000347 IPI:IPI00541455
RefSeq:NP_191690.2 UniGene:At.48793 UniGene:At.65801
UniGene:At.71203 ProteinModelPortal:Q8L7L5 IntAct:Q8L7L5
PaxDb:Q8L7L5 PRIDE:Q8L7L5 EnsemblPlants:AT3G61310.1 GeneID:825303
KEGG:ath:AT3G61310 TAIR:At3g61310 eggNOG:NOG291819
InParanoid:Q8L7L5 OMA:SSIGEMM PhylomeDB:Q8L7L5 ArrayExpress:Q8L7L5
Genevestigator:Q8L7L5 Uniprot:Q8L7L5
Length = 354
Score = 109 (43.4 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 92 SLRSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHG 149
S HV+ V+ G D+A V F+ + R +CVLS SG+V+ TL QPA + G
Sbjct: 163 SFTPHVIVVSIGEDIASKVISFSHQGPRAICVLSASGAVSTATLLQPAPSHGTIIYEG 220
Score = 37 (18.1 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 179 VMVIAATFANATYERLPLEDDEEVTGTQGQIQSTGAATNNNN 220
V VI +F A + ++ EE T +Q T A NNN+
Sbjct: 272 VQVIVGSFIWAI-PKGKIKKREE---TSEDVQDTDALENNND 309
>TAIR|locus:2178505 [details] [associations]
symbol:AT5G46640 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] InterPro:IPR017956 Pfam:PF02178 SMART:SM00384
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 EMBL:AB016882
InterPro:IPR005175 Pfam:PF03479 eggNOG:NOG315719
HOGENOM:HOG000116506 ProtClustDB:CLSN2686193 EMBL:BT015318
EMBL:BT015755 EMBL:AB493779 EMBL:BR000344 IPI:IPI00530307
RefSeq:NP_199476.1 UniGene:At.29940 ProteinModelPortal:Q9FIR1
SMR:Q9FIR1 PaxDb:Q9FIR1 PRIDE:Q9FIR1 EnsemblPlants:AT5G46640.1
GeneID:834707 KEGG:ath:AT5G46640 TAIR:At5g46640 InParanoid:Q9FIR1
OMA:DIASKVM PhylomeDB:Q9FIR1 Genevestigator:Q9FIR1 Uniprot:Q9FIR1
Length = 386
Score = 110 (43.8 bits), Expect = 0.00079, P = 0.00079
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 96 HVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHG 149
HV+EV G D+A V F+ + R +C+LS SG+V+ V LRQ + +V G
Sbjct: 183 HVIEVNTGEDIASKVMAFSDQGSRTICILSASGAVSRVMLRQASHSSGIVTYEG 236
>TAIR|locus:2122684 [details] [associations]
symbol:AHL3 "AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 3"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0010089 "xylem development" evidence=IMP] InterPro:IPR017956
SMART:SM00384 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL161563 InterPro:IPR005175 Pfam:PF03479 EMBL:AL035396
HOGENOM:HOG000116506 ProtClustDB:CLSN2685677 EMBL:AY099572
EMBL:BT003408 EMBL:BR000339 IPI:IPI00535403 PIR:T05553
RefSeq:NP_194262.1 UniGene:At.2582 ProteinModelPortal:Q9SB31
SMR:Q9SB31 IntAct:Q9SB31 PaxDb:Q9SB31 PRIDE:Q9SB31
EnsemblPlants:AT4G25320.1 GeneID:828635 KEGG:ath:AT4G25320
TAIR:At4g25320 eggNOG:NOG313609 InParanoid:Q9SB31 OMA:TSEFPPR
PhylomeDB:Q9SB31 Genevestigator:Q9SB31 Uniprot:Q9SB31
Length = 404
Score = 110 (43.8 bits), Expect = 0.00086, P = 0.00085
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 96 HVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHG 149
HV+ V G DV + F+++ R +C+LS +G ++NVTLRQ G + G
Sbjct: 169 HVLIVNAGEDVTMKIMTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYEG 222
>TAIR|locus:2118091 [details] [associations]
symbol:AHL1 "AT-hook motif nuclear-localized protein 1"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016132
"brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR017956 SMART:SM00384 GO:GO:0005739 EMBL:CP002687
GO:GO:0005730 GO:GO:0003677 InterPro:IPR005175 Pfam:PF03479
HOGENOM:HOG000116506 ProtClustDB:CLSN2685830 EMBL:AY070738
EMBL:AY149932 EMBL:AB284367 IPI:IPI00521294 RefSeq:NP_192945.2
UniGene:At.28340 ProteinModelPortal:Q8VYJ2 SMR:Q8VYJ2 IntAct:Q8VYJ2
PaxDb:Q8VYJ2 PRIDE:Q8VYJ2 EnsemblPlants:AT4G12080.1 GeneID:826816
KEGG:ath:AT4G12080 TAIR:At4g12080 eggNOG:NOG314683
InParanoid:Q8VYJ2 OMA:ADHRTIH PhylomeDB:Q8VYJ2
Genevestigator:Q8VYJ2 Uniprot:Q8VYJ2
Length = 356
Score = 109 (43.4 bits), Expect = 0.00092, P = 0.00092
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 96 HVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHG 149
H++ V G DV + F+++ R +CVLS +G +++VTLRQP + G + G
Sbjct: 173 HIITVNTGEDVTMKIISFSQQGPRSICVLSANGVISSVTLRQPDSSGGTLTYEG 226
>TAIR|locus:2031306 [details] [associations]
symbol:AT1G63480 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017956 SMART:SM00384 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 InterPro:IPR005175 Pfam:PF03479 HOGENOM:HOG000116506
eggNOG:NOG246569 ProtClustDB:CLSN2690476 EMBL:AY096576
EMBL:BR000348 IPI:IPI00529016 RefSeq:NP_176537.2 UniGene:At.28375
ProteinModelPortal:Q8LPN5 IntAct:Q8LPN5 EnsemblPlants:AT1G63480.1
GeneID:842654 KEGG:ath:AT1G63480 TAIR:At1g63480 InParanoid:Q8LPN5
OMA:GARAKTH PhylomeDB:Q8LPN5 Genevestigator:Q8LPN5 Uniprot:Q8LPN5
Length = 361
Score = 109 (43.4 bits), Expect = 0.00094, P = 0.00094
Identities = 17/45 (37%), Positives = 33/45 (73%)
Query: 96 HVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAA 140
HV+ + G D+A V F+++R R +C++SG+G++++VTL +P +
Sbjct: 163 HVISIGAGEDIAAKVLSFSQQRPRALCIMSGTGTISSVTLCKPGS 207
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.128 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 271 219 0.00092 112 3 11 23 0.45 33
32 0.39 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 28
No. of states in DFA: 588 (63 KB)
Total size of DFA: 170 KB (2100 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.03u 0.11s 19.14t Elapsed: 00:00:01
Total cpu time: 19.04u 0.11s 19.15t Elapsed: 00:00:01
Start: Fri May 10 09:21:15 2013 End: Fri May 10 09:21:16 2013