BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 040245
         (271 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9S7C9|ESCA_ARATH Putative DNA-binding protein ESCAROLA OS=Arabidopsis thaliana
           GN=ESC PE=2 SV=1
          Length = 311

 Score =  139 bits (350), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/191 (48%), Positives = 124/191 (64%), Gaps = 36/191 (18%)

Query: 42  NDTNEEEDRDTADEPREG--------AVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNSL 93
           +D + E D    D  ++G        +     +RPRGRPPGSKNK KPPI VTRDSPN+L
Sbjct: 54  SDDSRESDHSNKDHHQQGRPDSDPNTSSSAPGKRPRGRPPGSKNKAKPPIIVTRDSPNAL 113

Query: 94  RSHVMEVAGGADVAESVALFARRRQRGVCVLSGSGSVANVTLRQPAAPGA---------- 143
           RSHV+EV+ GAD+ ESV+ +ARRR RGV VL G+G+V+NVTLRQP  PG           
Sbjct: 114 RSHVLEVSPGADIVESVSTYARRRGRGVSVLGGNGTVSNVTLRQPVTPGNGGGVSGGGGV 173

Query: 144 --------VVALHGST----------GLTVYLAGGQGQVVGGSVVGQLVAAGPVMVIAAT 185
                   +++L G+           GL+++LAGGQGQVVGGSVV  L+A+ PV+++AA+
Sbjct: 174 VTLHGRFEILSLTGTVLPPPAPPGAGGLSIFLAGGQGQVVGGSVVAPLIASAPVILMAAS 233

Query: 186 FANATYERLPL 196
           F+NA +ERLP+
Sbjct: 234 FSNAVFERLPI 244


>sp|Q9LV34|BGL43_ARATH Beta-glucosidase 43 OS=Arabidopsis thaliana GN=BGLU43 PE=2 SV=2
          Length = 501

 Score = 34.3 bits (77), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 185 TFANATYERLPLEDDEEVTGTQGQIQSTGA--ATNNNNSPPQIGSSGQPPSAGLPDPSSL 242
           T  N   ERLP   +EEV   +G I   G    T    S P+I ++  P   G     ++
Sbjct: 304 TLQNIVKERLPKFTEEEVKMVKGSIDFVGINQYTTYFMSDPKISTT--PKDLGYQQDWNV 361

Query: 243 TYNLPPNLIPNGGQLHEAYAW 263
           T+N   N  P G + H  + +
Sbjct: 362 TFNFAKNGTPIGPRAHSEWLY 382


>sp|A7U6F1|DPOL_CEV01 DNA polymerase OS=Chrysochromulina ericina virus GN=dpo PE=3 SV=1
          Length = 1623

 Score = 33.1 bits (74), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 34/61 (55%)

Query: 41  INDTNEEEDRDTADEPREGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNSLRSHVMEV 100
           I+  +E+E+ D++D   +G VE  T + R +  G+KNK    + +  D   +  + ++E+
Sbjct: 318 IDIKDEDENSDSSDIENDGIVEEFTTKKRQKVTGTKNKDSNILEIINDLTCNRNTRILEL 377

Query: 101 A 101
           A
Sbjct: 378 A 378


>sp|Q4U3U3|QUTR_NEUTR Quinate repressor protein OS=Neurospora terricola GN=qa-1s PE=3
           SV=1
          Length = 917

 Score = 32.0 bits (71), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 7/105 (6%)

Query: 150 STGLTVYLAGGQGQVVGGSVVGQL-VAAGPVMVIAATFANATYERLPLEDDEEVTGTQGQ 208
           STGL +    G G +   +V   L +    +++   TFANA  E+L L  +  +      
Sbjct: 712 STGLVI----GAGGMARAAVYAMLQLGVKKILIFNRTFANA--EKLVLHFENLLARDALP 765

Query: 209 IQSTGAATNNNNSPPQIGSSGQPPSAGLPDPSSLTYNLPPNLIPN 253
           + STG  +++N     I S  +P      +P+ +   +P + + N
Sbjct: 766 LLSTGPRSDDNTCFHIIRSRDEPLPENFKNPTMIVSCIPTHTVDN 810


>sp|Q9Y2X9|ZN281_HUMAN Zinc finger protein 281 OS=Homo sapiens GN=ZNF281 PE=1 SV=1
          Length = 895

 Score = 31.2 bits (69), Expect = 8.0,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 24  SILNKRDQHQ--HHHHELSINDTNEEEDRDTADEPREGAVEVGTRRPRGRPPGSKNKPKP 81
           SIL++  Q Q   HH ++ ++ ++  +D    +EP++       +RP+    G K K KP
Sbjct: 178 SILHQHVQQQPAQHHRDVLLSSSSRTDDHHGTEEPKQDTNVKKAKRPKPESQGIKAKRKP 237


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.311    0.130    0.386 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,297,706
Number of Sequences: 539616
Number of extensions: 5330241
Number of successful extensions: 18420
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 18357
Number of HSP's gapped (non-prelim): 99
length of query: 271
length of database: 191,569,459
effective HSP length: 116
effective length of query: 155
effective length of database: 128,974,003
effective search space: 19990970465
effective search space used: 19990970465
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)