BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 040252
(213 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 279 bits (713), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 136/210 (64%), Positives = 167/210 (79%)
Query: 1 MGCFQSKVAKQFPGHEDPVLLASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQLA 60
+GCF + KQ G DP LLA T FSVSE+EAL+ELFK ISS+V+DDGLI+KEEFQLA
Sbjct: 16 LGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLA 75
Query: 61 LFKNRKKENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDN 120
LFK KKE+LFA+R+FDLFD K G++ F +F R+LSVFHPNAP +DKI FSF+LYDL
Sbjct: 76 LFKTNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQ 135
Query: 121 TGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSKN 180
GFIERQEVKQM++A L ES M L D IE I+DKTF +AD DGKIDK EW++ V ++
Sbjct: 136 QGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRH 195
Query: 181 PSLLKIMTLPYLRDITTSFPSFIFNSEVDE 210
PSLLK MTL YL+DITT+FPSF+F+S+V++
Sbjct: 196 PSLLKNMTLQYLKDITTTFPSFVFHSQVED 225
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 275 bits (704), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 134/215 (62%), Positives = 173/215 (80%), Gaps = 4/215 (1%)
Query: 1 MGCFQSKVAKQF----PGHEDPVLLASQTAFSVSEVEALFELFKMISSSVVDDGLISKEE 56
MGC SK K+ PG+EDP LLAS T F+V EVEAL+ELFK +SSS++DDGLI KEE
Sbjct: 1 MGCSVSKKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEE 60
Query: 57 FQLALFKNRKKENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLY 116
FQLALF+NR + NLFA+RIFD+FDVKR GVI+F +FVRSL VFHP+AP +K+ F+FKLY
Sbjct: 61 FQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLY 120
Query: 117 DLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNF 176
DL TGFIER+E+K+M++ALL ESE+ L+++ IE+++DK F+ AD DGKID EW++F
Sbjct: 121 DLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDF 180
Query: 177 VSKNPSLLKIMTLPYLRDITTSFPSFIFNSEVDEI 211
VS NPSL+K MTLPYL+DI +FPSF+ + E +E+
Sbjct: 181 VSLNPSLIKNMTLPYLKDINRTFPSFVSSCEEEEM 215
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 273 bits (698), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 132/207 (63%), Positives = 168/207 (81%), Gaps = 4/207 (1%)
Query: 1 MGCFQSKVAKQF----PGHEDPVLLASQTAFSVSEVEALFELFKMISSSVVDDGLISKEE 56
MGC SK K+ PG+EDP LLAS T F+V EVEAL+ELFK +SSS++DDGLI KEE
Sbjct: 1 MGCSVSKKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEE 60
Query: 57 FQLALFKNRKKENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLY 116
FQLALF+NR + NLFA+RIFD+FDVKR GVI+F +FVRSL VFHP+AP +K+ F+FKLY
Sbjct: 61 FQLALFRNRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLY 120
Query: 117 DLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNF 176
DL TGFIER+E+K+M++ALL ESE+ L+++ IE+++DK F+ AD DGKID EW++F
Sbjct: 121 DLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDF 180
Query: 177 VSKNPSLLKIMTLPYLRDITTSFPSFI 203
VS NPSL+K MTLPYL+DI +FPSF+
Sbjct: 181 VSLNPSLIKNMTLPYLKDINRTFPSFV 207
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 264 bits (675), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 128/189 (67%), Positives = 154/189 (81%)
Query: 17 DPVLLASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQLALFKNRKKENLFANRIF 76
DP LLA T FSVSE+EAL+ELFK ISS+V+DDGLI+KEEFQLALFK KKE+LFA+R+F
Sbjct: 1 DPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLFADRVF 60
Query: 77 DLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIAL 136
DLFD K G++ F +F R+LSVFHPNAP +DKI FSF+LYDL GFIERQEVKQM++A
Sbjct: 61 DLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVAT 120
Query: 137 LCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSKNPSLLKIMTLPYLRDIT 196
L ES M L D IE I+DKTF +AD DGKIDK EW++ V ++PSLLK MTL YL+DIT
Sbjct: 121 LAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVLRHPSLLKNMTLQYLKDIT 180
Query: 197 TSFPSFIFN 205
T+FPSF+F+
Sbjct: 181 TTFPSFVFH 189
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 74.3 bits (181), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 97/174 (55%), Gaps = 9/174 (5%)
Query: 21 LASQTAFSVSEVEALFELF-KMISSSVVDDGLISKEEFQLALFKNRKKENLFANRIFDLF 79
L +T F+ EV+ ++ F K S +D K Q F + K FA +F++F
Sbjct: 16 LTRKTYFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTK---FATFVFNVF 72
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIAL--L 137
D + G I+FS+F+++LSV ++K+ ++FKLYDLDN G+I R E+ ++ A+ +
Sbjct: 73 DENKDGRIEFSEFIQALSV-TSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQM 131
Query: 138 CESEMKLADE--TIEIILDKTFLDADVNQDGKIDKCEWQNFVSKNPSLLKIMTL 189
+ ++L +E T E +D+ F D N DGK+ E+Q +PS+++ ++L
Sbjct: 132 VGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSL 185
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 86/155 (55%), Gaps = 8/155 (5%)
Query: 14 GHEDPVLLASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQLALFKNRKKENLFAN 73
G+E L + F E++ L + FK + + + G +S EEF ++L ++N
Sbjct: 1 GNEASYPLEMCSHFDADEIKRLGKRFKKLD--LDNSGSLSVEEF-MSL--PELQQNPLVQ 55
Query: 74 RIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQML 133
R+ D+FD G +DF +F+ +S F +E K+ F+F++YD+D G+I E+ Q+L
Sbjct: 56 RVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL 115
Query: 134 IALLCESEMKLADETIEIILDKTFLDADVNQDGKI 168
++ + L D ++ I+DKT ++AD + DG+I
Sbjct: 116 KMMVGNN---LKDTQLQQIVDKTIINADKDGDGRI 147
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 86/155 (55%), Gaps = 8/155 (5%)
Query: 14 GHEDPVLLASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQLALFKNRKKENLFAN 73
G+E L + F E++ L + FK + + + G +S EEF ++L ++N
Sbjct: 2 GNEASYPLEMCSHFDADEIKRLGKRFKKLD--LDNSGSLSVEEF-MSL--PELQQNPLVQ 56
Query: 74 RIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQML 133
R+ D+FD G +DF +F+ +S F +E K+ F+F++YD+D G+I E+ Q+L
Sbjct: 57 RVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVL 116
Query: 134 IALLCESEMKLADETIEIILDKTFLDADVNQDGKI 168
++ + L D ++ I+DKT ++AD + DG+I
Sbjct: 117 KMMVGNN---LKDTQLQQIVDKTIINADKDGDGRI 148
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 67 KENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIER 126
++N R+ D+FD G +DF +F+ +S F +E K+ F+F++YD+D G+I
Sbjct: 35 QQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISN 94
Query: 127 QEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKI 168
E+ Q+L ++ + L D ++ I+DKT ++AD + DG+I
Sbjct: 95 GELFQVLKMMVGNN---LKDTQLQQIVDKTIINADKDGDGRI 133
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 67 KENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIER 126
++N R+ D+FD G +DF +F+ +S F +E K+ F+F++YD+D G+I
Sbjct: 36 QQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISN 95
Query: 127 QEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKI 168
E+ Q+L ++ + L D ++ I+DKT ++AD + DG+I
Sbjct: 96 GELFQVLKMMVGNN---LKDTQLQQIVDKTIINADKDGDGRI 134
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 88/173 (50%), Gaps = 11/173 (6%)
Query: 21 LASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ--LALFKNRKKENLFANRIFDL 78
L T F+ E++ ++ F S G +S EEF+ F + FA +F
Sbjct: 16 LLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYGNFFPYGDASKFAEHVFRT 71
Query: 79 FDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIAL-- 136
FD G IDF +F+ +LSV E K+ ++F +YDLD G+I + E+ +++ A+
Sbjct: 72 FDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYK 130
Query: 137 LCESEMKLADE--TIEIILDKTFLDADVNQDGKIDKCEWQNFVSKNPSLLKIM 187
+ S MK+ ++ T E +K F D N+DGK+ E+ +PS+++++
Sbjct: 131 MVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLL 183
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 11/175 (6%)
Query: 21 LASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ--LALFKNRKKENLFANRIFDL 78
L T F E++ ++ F S G ++K EFQ F + FA +F++
Sbjct: 16 LVRSTRFDKKELQQWYKGFFKDCPS----GHLNKSEFQKIYKQFFPFGDPSAFAEYVFNV 71
Query: 79 FDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIAL-- 136
FD + G IDF +F+ +LSV DK+ ++F+LYDLDN G I E+ +++ A+
Sbjct: 72 FDADKNGYIDFKEFICALSV-TSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYK 130
Query: 137 LCESEMKLA--DETIEIILDKTFLDADVNQDGKIDKCEWQNFVSKNPSLLKIMTL 189
+ S +KL ++T E ++K F D N+DG++ E+ ++P+++ ++L
Sbjct: 131 MVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSALSL 185
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 31/178 (17%)
Query: 21 LASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ----LALFKNRKKENLFANRIF 76
+ +T FS S++ L+ F + ++G +S+E+FQ LA+ N +RI
Sbjct: 17 IKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIPELAI-------NPLGDRII 67
Query: 77 DLFDVKRKGVIDFSDFVRSLSVFHP----------NAPQ-----EDKIDFSFKLYDLDNT 121
+ F + + ++F F+R+L+ F P N P+ +K+ F+F+LYDLD
Sbjct: 68 NAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKD 127
Query: 122 GFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSK 179
I R E+ Q+L ++ + ++DE + I D+T +AD + D I E+ + K
Sbjct: 128 DKISRDELLQVLRMMVG---VNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEK 182
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 88/178 (49%), Gaps = 31/178 (17%)
Query: 21 LASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ----LALFKNRKKENLFANRIF 76
+ +T FS S++ L+ F + ++G +S+E+FQ LA+ N +RI
Sbjct: 17 IKKETGFSHSQITRLYSRFTSLDKG--ENGTLSREDFQRIPELAI-------NPLGDRII 67
Query: 77 DLFDVKRKGVIDFSDFVRSLSVFHP----------NAPQ-----EDKIDFSFKLYDLDNT 121
+ F + + ++F F+R+L+ F P N P+ +K+ F+F+LYDLD
Sbjct: 68 NAFFPEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKD 127
Query: 122 GFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSK 179
I R E+ Q+L ++ + ++DE + I D+T +AD + D I E+ + K
Sbjct: 128 EKISRDELLQVLRMMVG---VNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLEK 182
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Query: 47 VDDGLISKEEFQLALFKNRKKENLFANRIFDLFDVK-RKGVIDFSDFVRSLSVFHPNAPQ 105
V+ L ++ F+ L K N F RI +F K + F DF+ LSVF A
Sbjct: 37 VESSLRAQVPFEQILSLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATP 96
Query: 106 EDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESE-MKLADETIEIILDKTFLDADVNQ 164
+ K ++F+++D D+ G + R+++ +++ L E E +L+ ++ ++D ++D+++
Sbjct: 97 DIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDR 156
Query: 165 DGKIDKCEWQNFVSKNP 181
DG I+ E+Q+ +S++P
Sbjct: 157 DGTINLSEFQHVISRSP 173
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 67 KENLFANRIFDLFDVK-RKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIE 125
K N F RI +F K + F DF+ LSVF A + K ++F+++D D+ G +
Sbjct: 88 KANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLN 147
Query: 126 RQEVKQMLIALLCESE-MKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSKNP 181
R+++ +++ L E E +L+ ++ ++D ++D+++DG I+ E+Q+ +S++P
Sbjct: 148 REDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRSP 204
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 13/172 (7%)
Query: 20 LLASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ--LALFKNRKKENLFANRIFD 77
+ Q A E + F M S GL + EF+ L L +K N +++++
Sbjct: 9 IAGDQKAVPTQETHVWYRTFMMEYPS----GLQTLHEFKTLLGLQGLNQKANKHIDQVYN 64
Query: 78 LFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIAL- 136
FD + G +DF +F+ ++++ E K+ + FKLYD D G I++ E+ M +A+
Sbjct: 65 TFDTNKDGFVDFLEFIAAVNLIM-QEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQ 123
Query: 137 -LCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSKNPSLLKIM 187
L + +E I ++ K D+N DG++ E+ N ++K+ LL+I+
Sbjct: 124 ALNGQQTLSPEEFINLVFHKI----DINNDGELTLEEFINGMAKDQDLLEIV 171
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 92/177 (51%), Gaps = 13/177 (7%)
Query: 20 LLASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ--LALFKNRKKENLFANRIFD 77
LL +Q+ F+ E++ L+ FK S G++++E F+ + F + +A+ +F+
Sbjct: 54 LLEAQSKFTKKELQILYRGFKNECPS----GVVNEETFKEIYSQFFPQGDSTTYAHFLFN 109
Query: 78 LFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALL 137
FD G + F DF++ LS+ QE K++++F LYD++ G+I ++E+ ++ A+
Sbjct: 110 AFDTDHNGAVSFEDFIKGLSILLRGTVQE-KLNWAFNLYDINKDGYITKEEMLDIMKAIY 168
Query: 138 -----CESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSKNPSLLKIMTL 189
C + L ++ ++ F D N+DG + E+ K+ ++++ M L
Sbjct: 169 DMMGKCTYPV-LKEDAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQL 224
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 90/175 (51%), Gaps = 11/175 (6%)
Query: 21 LASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ--LALFKNRKKENLFANRIFDL 78
L +QT F+ E++ L+ FK S G+++++ F+ A F + +A+ +F+
Sbjct: 6 LEAQTNFTKRELQVLYRGFKNECPS----GVVNEDTFKQIYAQFFPHGDASTYAHYLFNA 61
Query: 79 FDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQE----VKQMLI 134
FD + G + F DFV +LS+ E K+ ++F LYD++ G+I ++E VK +
Sbjct: 62 FDTTQTGSVKFEDFVTALSILLRGTVHE-KLRWTFNLYDINKDGYINKEEMMDIVKAIYD 120
Query: 135 ALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSKNPSLLKIMTL 189
+ + LA++T +D F D N+DG + E+ ++ ++++ + L
Sbjct: 121 MMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQL 175
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 10/124 (8%)
Query: 69 NLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQE 128
N + ++F+ FD + G IDF ++V +LS+ + K+ + FKLYD+D G I+R E
Sbjct: 51 NKYVEQMFETFDFNKDGYIDFMEYVAALSLV-LKGKVDQKLRWYFKLYDVDGNGCIDRGE 109
Query: 129 VKQMLIAL----LCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSKNPSLL 184
+ ++ A+ C M A+E ++ DK D+N DG++ E+ V K+ LL
Sbjct: 110 LLNIIKAIRAINRCNEAMT-AEEFTNMVFDKI----DINGDGELSLEEFMEGVQKDEVLL 164
Query: 185 KIMT 188
I+T
Sbjct: 165 DILT 168
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 11/152 (7%)
Query: 21 LASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ--LALFKNRKKENLFANRIFDL 78
L +QT F+ E++ L+ FK S G++++E F+ A F + +A+ +F+
Sbjct: 42 LEAQTNFTKRELQVLYRGFKNECPS----GVVNEETFKQIYAQFFPHGDASTYAHYLFNA 97
Query: 79 FDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQE----VKQMLI 134
FD + G + F DFV +LS+ E K+ ++F LYD++ G+I ++E VK +
Sbjct: 98 FDTTQTGSVKFEDFVTALSILLRGTVHE-KLRWTFNLYDINKDGYINKEEMMDIVKAIYD 156
Query: 135 ALLCESEMKLADETIEIILDKTFLDADVNQDG 166
+ + L ++T +D F D N+DG
Sbjct: 157 MMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDG 188
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 58.5 bits (140), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 78/152 (51%), Gaps = 11/152 (7%)
Query: 21 LASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ--LALFKNRKKENLFANRIFDL 78
L +QT F+ E++ L+ FK S G++++E F+ A F + +A+ +F+
Sbjct: 9 LEAQTNFTKRELQVLYRGFKNEXPS----GVVNEETFKQIYAQFFPHGDASTYAHYLFNA 64
Query: 79 FDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQE----VKQMLI 134
FD + G + F DFV +LS+ E K+ ++F LYD++ G+I ++E VK +
Sbjct: 65 FDTTQTGSVKFEDFVTALSILLRGTVHE-KLRWTFNLYDINKDGYINKEEMMDIVKAIYD 123
Query: 135 ALLCESEMKLADETIEIILDKTFLDADVNQDG 166
+ + L ++T +D F D N+DG
Sbjct: 124 MMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDG 155
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 87/179 (48%), Gaps = 19/179 (10%)
Query: 21 LASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQL--ALFKNRKKENLFANRIFDL 78
L +QT F+ E+++L+ FK + GL+ ++ F+L + F + +A+ +F+
Sbjct: 82 LQAQTKFTKKELQSLYRGFK----NECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNA 137
Query: 79 FDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLC 138
FD G I F DFV LS+ E K+ ++F LYD++ G I ++E ++A++
Sbjct: 138 FDADGNGAIHFEDFVVGLSILLRGTVHE-KLKWAFNLYDINKDGCITKEE----MLAIMK 192
Query: 139 ESEMKLADETIEII--------LDKTFLDADVNQDGKIDKCEWQNFVSKNPSLLKIMTL 189
+ T I+ +++ F D NQDG + E+ K+ +++ M L
Sbjct: 193 SIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDENIMNSMQL 251
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 11/152 (7%)
Query: 21 LASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ--LALFKNRKKENLFANRIFDL 78
L +QT F+ E++ L+ FK S G+++++ F+ A F + +A+ +F+
Sbjct: 6 LEAQTNFTKRELQVLYRGFKNECPS----GVVNEDTFKQIYAQFFPHGDASTYAHYLFNA 61
Query: 79 FDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQE----VKQMLI 134
FD + G + F DFV +LS+ E K+ ++F LYD++ G+I ++E VK +
Sbjct: 62 FDTTQTGSVKFEDFVTALSILLRGTVHE-KLRWTFNLYDINKDGYINKEEMMDIVKAIYD 120
Query: 135 ALLCESEMKLADETIEIILDKTFLDADVNQDG 166
+ + L ++T +D F D N+DG
Sbjct: 121 MMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDG 152
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 26/200 (13%)
Query: 1 MGCFQSKVAKQFPGHEDPVLLASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQLA 60
MG SK++K +D L T F E++ + F S G +++E+F +
Sbjct: 1 MGAKTSKLSK-----DDLTCLKQSTYFDRREIQQWHKGFLRDCPS----GQLAREDF-VK 50
Query: 61 LFKN----RKKENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLY 116
++K E+ FAN +F +FD G I F +F+ LS E+K+ ++F+LY
Sbjct: 51 IYKQFFPFGSPED-FANHLFTVFDKDNNGFIHFEEFITVLST-TSRGTLEEKLSWAFELY 108
Query: 117 DLDNTGFIERQE-------VKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKID 169
DL++ G+I E V +M+ +++ +E + T E+ + K F D N+DG I
Sbjct: 109 DLNHDGYITFDEMLTIVASVYKMMGSMVTLNE---DEATPEMRVKKIFKLMDKNEDGYIT 165
Query: 170 KCEWQNFVSKNPSLLKIMTL 189
E++ +PS++ + L
Sbjct: 166 LDEFREGSKVDPSIIGALNL 185
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 83/179 (46%), Gaps = 32/179 (17%)
Query: 21 LASQTAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ----LALFKNRKKENLFANRIF 76
+ +T FS + + L F+ + + G +S+ + Q LA+ N +RI
Sbjct: 17 IRRETGFSQASLLRLHHRFRALDRN--KKGYLSRMDLQQIGALAV-------NPLGDRII 67
Query: 77 DLFDVKRKGVIDFSDFVRSLSVFHP-----------NAPQ-----EDKIDFSFKLYDLDN 120
+ F +DF FVR L+ F P P+ +K+ ++F+LYDLD
Sbjct: 68 ESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDR 127
Query: 121 TGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSK 179
G I R E+ Q+L ++ +++ +E +E I D+T +AD + DG + E+ + K
Sbjct: 128 DGKISRHEMLQVLRLMVG---VQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEK 183
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 66/128 (51%), Gaps = 10/128 (7%)
Query: 71 FANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVK 130
+ +F FD IDF ++V +L++ E K+ ++FK+YD D G I+RQE+
Sbjct: 60 YVEAMFRAFDTNGDNTIDFLEYVAALNLV-LRGTLEHKLKWTFKIYDKDRNGCIDRQELL 118
Query: 131 QMLIALL-----CESEMKLADE----TIEIILDKTFLDADVNQDGKIDKCEWQNFVSKNP 181
++ ++ C E++ + T E ++D+ FL D N DG++ E+ ++
Sbjct: 119 DIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDK 178
Query: 182 SLLKIMTL 189
++K++ +
Sbjct: 179 WVMKMLQM 186
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 25 TAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ--LALFKNRKKENLFANRIFDLFDVK 82
T F+ E+ + ++ F S G I+++EFQ + F +A +F FD
Sbjct: 20 TKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDAN 75
Query: 83 RKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALL 137
G +DF ++V +L + + K++++F LYD+D G I + EV +++ A+
Sbjct: 76 SDGTLDFKEYVIALHMTSAGKTNQ-KLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 25 TAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ--LALFKNRKKENLFANRIFDLFDVK 82
T F+ E+ + ++ F S G I+++EFQ + F +A +F FD
Sbjct: 20 TKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDAN 75
Query: 83 RKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALL 137
G +DF ++V +L + + K++++F LYD+D G I + EV +++ A+
Sbjct: 76 SDGTLDFKEYVIALHMTSAGKTNQ-KLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 25 TAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ--LALFKNRKKENLFANRIFDLFDVK 82
T F+ E+ + ++ F S G I+++EFQ + F +A +F FD
Sbjct: 20 TKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDAN 75
Query: 83 RKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALL 137
G +DF ++V +L + + K++++F LYD+D G I + EV +++ A+
Sbjct: 76 SDGTLDFKEYVIALHMTSAGKTNQ-KLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 25 TAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ--LALFKNRKKENLFANRIFDLFDVK 82
T F+ E+ + ++ F S G I+++EFQ + F +A +F FD
Sbjct: 21 TKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDAN 76
Query: 83 RKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALL 137
G +DF ++V +L + + K++++F LYD+D G I + EV +++ A+
Sbjct: 77 SDGTLDFKEYVIALHMTSAGKTNQ-KLEWAFSLYDVDGNGTISKNEVLEIVTAIF 130
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 25 TAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ--LALFKNRKKENLFANRIFDLFDVK 82
T F+ E+ + ++ F S G I+++EFQ + F +A +F FD
Sbjct: 20 TKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDAN 75
Query: 83 RKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALL 137
G +DF +V +L + + K++++F LYD+D G I + EV +++ A+
Sbjct: 76 SDGTLDFKQYVIALHMTSAGKTNQ-KLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 25 TAFSVSEVEALFELFKMISSSVVDDGLISKEEFQ--LALFKNRKKENLFANRIFDLFDVK 82
T F+ E+ + ++ F S G I+++EFQ + F +A +F FD
Sbjct: 20 TKFTEEELSSWYQSFLKECPS----GRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDAN 75
Query: 83 RKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALL 137
G +DF +V +L + + K++++F LYD+D G I + EV +++ A+
Sbjct: 76 SDGTLDFKQYVIALHMTSAGKTNQ-KLEWAFSLYDVDGNGTISKNEVLEIVTAIF 129
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 27 FSVSEVEALFELFKMISSSVVDDGLISKEEFQLALFKNRKKENLFANRIFDLFD---VKR 83
S E+ L ELFKMI + + G I+ +E + L R L + I DL D + +
Sbjct: 4 LSEEEIGGLKELFKMIDTD--NSGTITFDELKDGL--KRVGSELMESEIKDLMDAADIDK 59
Query: 84 KGVIDFSDFVRSLSVFHPNA-PQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEM 142
G ID+ +F+ + H N +E+ + +F +D D +G+I E++Q C+ +
Sbjct: 60 SGTIDYGEFI--AATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQA-----CK-DF 111
Query: 143 KLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSKNPS 182
L D I +D + D + DG+ID E+ + K
Sbjct: 112 GLDD----IHIDDMIKEIDQDNDGQIDYGEFAAMMRKRKG 147
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 70/152 (46%), Gaps = 20/152 (13%)
Query: 26 AFSVSEVEALFELFKMISSSVVDDGLISKEEFQLALFKNRKKENLFANRIFDLF---DVK 82
+ S E+ L E F I + G I+ EE + L R NL + I DL DV
Sbjct: 20 SLSEEEIAGLKEXFNXIDAD--KSGQITFEELKAGL--KRVGANLKESEILDLXQAADVD 75
Query: 83 RKGVIDFSDFVRSLSVFHPNA-PQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESE 141
G ID+ +F+ + H N +ED + +F +D D +G+I E++Q CE E
Sbjct: 76 NSGTIDYKEFI--AATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQA-----CE-E 127
Query: 142 MKLADETIEIILDKTFLDADVNQDGKIDKCEW 173
+ D IE + D D + DG+ID E+
Sbjct: 128 FGVEDVRIEELX----RDVDQDNDGRIDYNEF 155
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 50 GLISKEEFQ--LALFKNRKKENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQED 107
G I++++FQ A F +A +F FD G +DF ++V +L +
Sbjct: 49 GRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQ- 107
Query: 108 KIDFSFKLYDLDNTGFIERQEVKQMLIAL 136
K++++F LYD+D G I + EV +++ A+
Sbjct: 108 KLEWAFSLYDVDGNGTISKNEVLEIVXAI 136
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + + E++I +F+++D D G+I E++ ++ L
Sbjct: 357 DADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 413
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 414 -GEKLTDEEV----DEMIREADIDGDGQVN---YEEFV 443
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D GFI E++ ++ L
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE- 115
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVS 178
KL DE + D+ +AD++ DG+++ ++ FV+
Sbjct: 116 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFVT 144
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D GFI E++ ++ L
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE- 115
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVS 178
KL DE + D+ +AD++ DG+++ ++ FV+
Sbjct: 116 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFVT 144
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D GFI E++ ++ L
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE- 114
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVS 178
KL DE + D+ +AD++ DG+++ ++ FV+
Sbjct: 115 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFVT 143
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D GFI E++ ++ L
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE- 114
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVS 178
KL DE + D+ +AD++ DG+++ ++ FV+
Sbjct: 115 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFVT 143
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 30 SEVEALFELFKMISSSVVDDGLISKEEF---QLALFKNRKKENLFANRIFDLFDVKRKGV 86
+E +A F++F + + +DG IS +E L +N E L + D D G
Sbjct: 18 NEFKAAFDIFVLGA----EDGSISTKELGKVMRMLGQNPTPEEL--QEMIDEVDEDGSGT 71
Query: 87 IDFSDF----VRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEM 142
+DF +F VRS+ +E+ D F+++D + G+I+ E+K ML A
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDL-FRMFDKNADGYIDLDELKIMLQA------- 123
Query: 143 KLADETI-EIILDKTFLDADVNQDGKIDKCEWQNFV 177
ETI E +++ D D N DG+ID EW F+
Sbjct: 124 --TGETITEDDIEELMKDGDKNNDGRIDYDEWLEFM 157
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E+K+ +F+++D D GFI E++ ++ L
Sbjct: 56 DADGNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGE- 114
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +ADV+ DG+++ ++ FV
Sbjct: 115 ---KLTDEEV----DEMIREADVDGDGQVN---YEEFV 142
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D GFI E++ ++ L
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGE- 115
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVS 178
KL DE + D+ ++D++ DG+++ ++ FV+
Sbjct: 116 ---KLTDEEV----DEMIRESDIDGDGQVN---YEEFVT 144
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E+++ +F+++D D GFI E++ ++ L
Sbjct: 57 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL--- 113
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +ADV+ DG+I+ ++ FV
Sbjct: 114 -GEKLTDEEV----DEMIREADVDGDGQIN---YEEFV 143
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 52 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 110
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 111 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 138
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 53 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 111
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 112 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 139
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 60 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 118
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 119 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 146
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E+++ +F+++D D GFI E++ ++ L
Sbjct: 53 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGE- 111
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +ADV+ DG+++ ++ FV
Sbjct: 112 ---KLTDEEV----DEMIREADVDGDGQVN---YEEFV 139
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 112
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 113 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 140
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 112
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 113 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 140
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 115
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 116 ---KLTDEEV----DQMIREADIDGDGQVN---YEEFV 143
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 58 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 116
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 117 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 144
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 19/157 (12%)
Query: 21 LASQ-TAFSVSEVEALFELFKMISSSVVDDGLISKEEFQL---ALFKNRKKENLFANRIF 76
+A Q T +SE + F LF DG I+ +E +L +N + L +
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDG-----DGCITTKELGTVMRSLGQNPTEAEL--QDMI 53
Query: 77 DLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIAL 136
+ D G IDF +F+ ++ + E+++ +F+++D D GFI E++ ++ L
Sbjct: 54 NEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNL 113
Query: 137 LCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEW 173
KL DE + D+ +ADV+ DG+I+ E+
Sbjct: 114 ----GEKLTDEEV----DEMIREADVDGDGQINYDEF 142
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 115
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 116 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 143
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 115
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 116 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 143
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 54 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 112
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 113 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 140
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 115
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 116 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 143
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E+++ +F+++D D GFI E++ ++ L
Sbjct: 56 DADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGE- 114
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +ADV+ DG+++ ++ FV
Sbjct: 115 ---KLTDEEV----DEMIREADVDGDGQVN---YEEFV 142
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 115
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 116 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 143
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 413
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 414 -GEKLTDEEV----DEMIREADIDGDGQVN---YEEFV 443
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 55 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 113
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 114 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 141
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 358 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 414
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 415 -GEKLTDEEV----DEMIREADIDGDGQVN---YEEFV 444
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 114
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 115 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 142
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 62 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 120
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 121 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 148
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 114
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 115 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 142
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 413
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 414 -GEKLTDEEV----DEMIREADIDGDGQVN---YEEFV 443
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 320 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 376
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 377 -GEKLTDEEV----DEMIREADIDGDGQVN---YEEFV 406
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 323 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 379
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 380 -GEKLTDEEV----DEMIREADIDGDGQVN---YEEFV 409
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 323 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 379
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 380 -GEKLTDEEV----DEMIREADIDGDGQVN---YEEFV 409
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 56 DADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 114
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 115 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFV 142
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 356 DADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 412
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 413 -GEKLTDEEV----DEMIREADIDGDGQVN---YEEFV 442
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 68/132 (51%), Gaps = 16/132 (12%)
Query: 49 DGLISKEEFQL---ALFKNRKKENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQ 105
DG I+ EE +L +N +E L + D G I+F +F+ ++ +
Sbjct: 24 DGCITVEELATVIRSLDQNPTEEEL--QDMISEVDADGNGTIEFDEFLSLMAKKVKDTDA 81
Query: 106 EDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQD 165
E+++ +FK++D D G+I E++ ++I L KL DE +E ++ + AD++ D
Sbjct: 82 EEELKEAFKVFDKDQNGYISASELRHVMINL----GEKLTDEEVEQMIKE----ADLDGD 133
Query: 166 GKIDKCEWQNFV 177
G+++ ++ FV
Sbjct: 134 GQVN---YEEFV 142
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Query: 49 DGLISKEEFQL---ALFKNRKKENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQ 105
DG I+ +E +L +N + L + + D G IDF +F+ ++ +
Sbjct: 316 DGTITTKELGTVMRSLGQNPTEAEL--QDMINEVDADGDGTIDFPEFLIMMARKMKDTDS 373
Query: 106 EDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQD 165
E++I +F+++D D G+I E++ ++ L KL DE + D+ +AD++ D
Sbjct: 374 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEV----DEMIREADIDGD 425
Query: 166 GKIDKCEWQNFV 177
G+++ ++ FV
Sbjct: 426 GQVN---YEEFV 434
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ E++I +F+++D D G+I E++ ++ L
Sbjct: 357 DADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 413
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 414 -GEKLTDEEV----DEMIREADIDGDGQVN---YEEFV 443
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 14 GHEDPVLLASQ-TAFSVSEVEALFELFKMISSSVVDDGLISKEEFQL---ALFKNRKKEN 69
GH+ L Q T ++E + F LF DG I+ +E +L +N +
Sbjct: 293 GHKLEYNLPDQLTEEQIAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAE 347
Query: 70 LFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEV 129
L + + D G IDF +F+ ++ E++I +F+++D D G+I E+
Sbjct: 348 L--QDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAEL 405
Query: 130 KQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
+ ++ L KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 406 RHVMTNL----GEKLTDEEV----DEMIREADIDGDGQVN---YEEFV 442
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 22/168 (13%)
Query: 14 GHEDPVLLASQ-TAFSVSEVEALFELFKMISSSVVDDGLISKEEFQL---ALFKNRKKEN 69
GH+ L Q T ++E + F LF DG I+ +E +L +N +
Sbjct: 293 GHKLEYNLPDQLTEEQIAEFKEAFSLFDKDG-----DGTITTKELGTVMRSLGQNPTEAE 347
Query: 70 LFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEV 129
L + + D G IDF +F+ ++ E++I +F+++D D G+I E+
Sbjct: 348 L--QDMINEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAEL 405
Query: 130 KQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
+ ++ L KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 406 RHVMTNL----GEKLTDEEV----DEMIREADIDGDGQVN---YEEFV 442
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ + + E++I +F+++D D G+I E++ + L
Sbjct: 57 DADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-- 114
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 115 --EKLTDEEV----DQXIREADIDGDGQVN---YEEFV 143
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ E++I +F+++D D G+I E++ ++ L
Sbjct: 357 DADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL--- 413
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 414 -GEKLTDEEV----DEMIREADIDGDGQVN---YEEFV 443
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ + + E++I +F+++D D G+I E++ + L
Sbjct: 56 DADGNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-- 113
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 114 --EKLTDEEV----DEXIREADIDGDGQVN---YEEFV 142
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 114
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +A+++ DG+++ ++ FV
Sbjct: 115 ---KLTDEEV----DEMIREANIDGDGQVN---YEEFV 142
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 57 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 115
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
L DE + D+ +AD++ DG+++ ++ FV
Sbjct: 116 ---XLTDEEV----DEMIREADIDGDGQVN---YEEFV 143
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE- 114
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
L DE + D+ +AD++ DG+++ ++ FV
Sbjct: 115 ---XLTDEEV----DEMIREADIDGDGQVN---YEEFV 142
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 30 SEVEALFELFKMISSSVVDDGLISKEEF---QLALFKNRKKENLFANRIFDLFDVKRKGV 86
+E +A F++F + + +DG IS +E L +N E L + D D G
Sbjct: 18 NEFKAAFDIFVLGA----EDGSISTKELGKVMRMLGQNPTPEEL--QEMIDEVDEDGSGT 71
Query: 87 IDFSDF----VRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEM 142
+DF +F VRS+ +E+ D F+++D + G+I+ +E+K ML A
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKTEEELSDL-FRMFDKNADGYIDLEELKIMLQA------- 123
Query: 143 KLADETI-EIILDKTFLDADVNQDGKIDKCEWQNFV 177
ETI E +++ D D N DG+ID E+ F+
Sbjct: 124 --TGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 13/99 (13%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ ++ +E I +F+++D D GFI E++ ++ L
Sbjct: 56 DADGNGTIDFPEFLTMMARKMKDSEEE--IREAFRVFDKDGNGFISAAELRHVMTNLGE- 112
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVS 178
KL DE + D+ +AD++ DG+++ ++ FV+
Sbjct: 113 ---KLTDEEV----DEMIREADIDGDGQVN---YEEFVT 141
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 50/98 (51%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G I+F +F+ + + E++I +F+++D D G+I E++ + L
Sbjct: 56 DADGNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLG-- 113
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +AD++ DG+++ ++ FV
Sbjct: 114 --EKLTDEEV----DEXIREADIDGDGQVN---YEEFV 142
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 30 SEVEALFELFKMISSSVVDDGLISKEEF---QLALFKNRKKENLFANRIFDLFDVKRKGV 86
+E +A F++F + + +DG IS +E L +N E L + D D G
Sbjct: 18 NEFKAAFDIFVLGA----EDGSISTKELGKVMRMLGQNPTPEEL--QEMIDEVDEDGSGT 71
Query: 87 IDFSDF----VRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEM 142
+DF +F VRS+ +E+ D F+++D + G+I+ +E+K ML A
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDL-FRMFDKNADGYIDLEELKIMLQA------- 123
Query: 143 KLADETI-EIILDKTFLDADVNQDGKIDKCEWQNFV 177
ETI E +++ D D N DG+ID E+ F+
Sbjct: 124 --TGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 83/169 (49%), Gaps = 30/169 (17%)
Query: 28 SVSEVEALFELFKMISSSVVDDGLISKEEF-----QLALFKNRKKENLFANR-------- 74
++ E + L E+F+ + ++ +DG++ ++E + K +L N
Sbjct: 326 TLDETKQLTEIFRKLDTN--NDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQI 383
Query: 75 --IFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQM 132
+ L D+ G I++S+F+ S ++ ++++ +FK++D D +G I +E
Sbjct: 384 DSLMPLLDMDGSGSIEYSEFIAS-AIDRTILLSRERMERAFKMFDKDGSGKISTKE---- 438
Query: 133 LIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEW----QNFV 177
L L +++ + E +E I+++ D N+DG++D E+ QNFV
Sbjct: 439 LFKLFSQADSSIQMEELESIIEQ----VDNNKDGEVDFNEFVEMLQNFV 483
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 50/93 (53%), Gaps = 11/93 (11%)
Query: 85 GVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKL 144
G +DF +F+ ++ + E++I +F+++D D GF+ E++ ++ L KL
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLG----EKL 116
Query: 145 ADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
+DE + D+ AD + DG+++ ++ FV
Sbjct: 117 SDEEV----DEMIRAADTDGDGQVN---YEEFV 142
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 30 SEVEALFELFKMISSSVVDDGLISKEEF---QLALFKNRKKENLFANRIFDLFDVKRKGV 86
+E +A F++F + + +DG IS +E L +N E L + D D G
Sbjct: 18 NEFKAAFDIFVLGA----EDGSISTKELGKVMRMLGQNPTPEEL--QEMIDEVDEDGSGT 71
Query: 87 IDFSDF----VRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEM 142
+DF +F VRS+ +E+ D F+++D + G+I+ E+K ML A
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDL-FRMWDKNADGYIDLDELKIMLQA------- 123
Query: 143 KLADETI-EIILDKTFLDADVNQDGKIDKCEWQNFV 177
ETI E +++ D D N DG+ID E+ F+
Sbjct: 124 --TGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 29 VSEVEALFELFKMISSSVVDDGLISKEEFQLAL--FKNRKKENLFANRIFDLFDVKRKGV 86
VSE + FELF + G I+KE Q L F R + F N +F+ D G
Sbjct: 5 VSEFKEAFELFDSERT-----GFITKEGLQTVLKQFGVRVEPAAF-NEMFNEADATGNGK 58
Query: 87 IDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIAL 136
I F +F+ + ED + +F+ +D + TG+I + ++ L+ L
Sbjct: 59 IQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNL 108
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 74/156 (47%), Gaps = 24/156 (15%)
Query: 30 SEVEALFELFKMISSSVVDDGLISKEEF---QLALFKNRKKENLFANRIFDLFDVKRKGV 86
+E +A F++F + + +DG IS +E L +N E L + D D G
Sbjct: 18 NEFKAAFDIFVLGA----EDGCISTKELGKVMRMLGQNPTPEEL--QEMIDEVDEDGSGT 71
Query: 87 IDFSDF----VRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEM 142
+DF +F VR + +E+ D F+++D + G+I+ +E+K ML A
Sbjct: 72 VDFDEFLVMMVRCMKDDSKGKTEEELSDL-FRMFDKNADGYIDLEELKIMLQA------- 123
Query: 143 KLADETI-EIILDKTFLDADVNQDGKIDKCEWQNFV 177
ETI E +++ D D N DG+ID E+ F+
Sbjct: 124 --TGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 30 SEVEALFELFKMISSSVVDDGLISKEEF---QLALFKNRKKENLFANRIFDLFDVKRKGV 86
+E +A F++F + + +DG IS +E L +N E L + D D G
Sbjct: 18 NEFKAAFDIFVLGA----EDGSISTKELGKVMRMLGQNPTPEEL--QEMIDEVDEDGSGT 71
Query: 87 IDFSDF----VRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEM 142
+DF +F VRS+ +E+ D F+++D + G+I+ E+K ML A
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDL-FRMFDKNADGYIDLDELKIMLQA------- 123
Query: 143 KLADETI-EIILDKTFLDADVNQDGKIDKCEWQNFV 177
ETI E +++ D D N DG+ID E F+
Sbjct: 124 --TGETITEDDIEELMKDGDKNNDGRIDYDEXLEFM 157
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 23/148 (15%)
Query: 29 VSEVEALFELFKMISSSVVDDGLISKEEFQLA---LFKNRKKENLFANRIFDLFDVKRKG 85
++E +A F++F G IS +E L +N KE L A I + D G
Sbjct: 19 IAEFKAAFDMFDADGG-----GDISTKELGTVMRMLGQNPTKEELDA--IIEEVDEDGSG 71
Query: 86 VIDFSDF----VRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESE 141
IDF +F VR + E++++ F+++D + GFI+ +E+ ++L A +
Sbjct: 72 TIDFEEFLVMMVRQMKE-DAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRA----TG 126
Query: 142 MKLADETIEIILDKTFLDADVNQDGKID 169
+ +E IE ++ D+D N DG+ID
Sbjct: 127 EHVTEEDIEDLM----KDSDKNNDGRID 150
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 29 VSEVEALFELFKMISSSVVDDGLISKEEFQLA---LFKNRKKENLFANRIFDLFDVKRKG 85
++E +A F++F G IS +E L +N KE L A I + D G
Sbjct: 19 IAEFKAAFDMFDADGG-----GDISTKELGTVMRMLGQNPTKEELDA--IIEEVDEDGSG 71
Query: 86 VIDFSDF----VRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESE 141
IDF +F VR + E+++ F+++D + GFI+ +E+ ++L A
Sbjct: 72 TIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIFDKNADGFIDIEELGEILRA------ 124
Query: 142 MKLADETIEIILDKTFLDADVNQDGKID 169
+ IE ++ D+D N DG+ID
Sbjct: 125 --TGEHVIEEDIEDLMKDSDKNNDGRID 150
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 24/156 (15%)
Query: 30 SEVEALFELFKMISSSVVDDGLISKEEF---QLALFKNRKKENLFANRIFDLFDVKRKGV 86
+E +A F++F + + +DG IS +E L +N E L + D D G
Sbjct: 18 NEFKAAFDIFVLGA----EDGSISTKELGKVMRMLGQNPTPEEL--QEMIDEVDEDGSGT 71
Query: 87 IDFSDF----VRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEM 142
+DF +F VRS+ +E+ D F++ D + G+I+ E+K ML A
Sbjct: 72 VDFDEFLVMMVRSMKDDSKGKSEEELSDL-FRMXDKNADGYIDLDELKIMLQA------- 123
Query: 143 KLADETI-EIILDKTFLDADVNQDGKIDKCEWQNFV 177
ETI E +++ D D N DG+ID E+ F+
Sbjct: 124 --TGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ E+++ +FK++D D G I E++ ++ L
Sbjct: 56 DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE- 114
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL D+ + D+ +AD++ DG I+ ++ FV
Sbjct: 115 ---KLTDDEV----DEMIREADIDGDGHIN---YEEFV 142
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 71/148 (47%), Gaps = 23/148 (15%)
Query: 29 VSEVEALFELFKMISSSVVDDGLISKEEFQLA---LFKNRKKENLFANRIFDLFDVKRKG 85
++E +A F++F G IS +E L +N KE L A I + D G
Sbjct: 19 IAEFKAAFDMFDADGG-----GDISTKELGTVMRMLGQNPTKEELDA--IIEEVDEDGSG 71
Query: 86 VIDFSDF----VRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESE 141
IDF +F VR + +E+ D F+++D + GFI+ +E+ ++L A +
Sbjct: 72 TIDFEEFLVMMVRQMKEDAKGKSEEELAD-CFRIFDKNADGFIDIEELGEILRA----TG 126
Query: 142 MKLADETIEIILDKTFLDADVNQDGKID 169
+ +E IE ++ D+D N DG+ID
Sbjct: 127 EHVTEEDIEDLM----KDSDKNNDGRID 150
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ E+++ +FK++D D G I E++ ++ L
Sbjct: 56 DADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGE- 114
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL D+ + D+ +AD++ DG I+ ++ FV
Sbjct: 115 ---KLTDDEV----DEMIREADIDGDGHIN---YEEFV 142
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 50 GLISKEEFQLALFKNRKK--ENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQED 107
G+IS E Q AL + I +FD + K ++FS+F V+ ++
Sbjct: 19 GVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT---GVWKYITDWQN 75
Query: 108 KIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDK 155
F+ YD DN+G I++ E+KQ L S +L+D+ +I++ K
Sbjct: 76 ----VFRTYDRDNSGMIDKNELKQAL------SGYRLSDQFHDILIRK 113
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 23/148 (15%)
Query: 29 VSEVEALFELFKMISSSVVDDGLISKEEFQLA---LFKNRKKENLFANRIFDLFDVKRKG 85
++E +A F++F G IS +E L +N KE L A I + D G
Sbjct: 19 IAEFKAAFDMFDADGG-----GDISTKELGTVMRMLGQNPTKEELDA--IIEEVDEDGSG 71
Query: 86 VIDFSDF----VRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESE 141
IDF +F VR + E+++ F+++D + GFI+ +E+ ++L A +
Sbjct: 72 TIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIFDKNADGFIDIEELGEILRA----TG 126
Query: 142 MKLADETIEIILDKTFLDADVNQDGKID 169
+ +E IE ++ D+D N DG+ID
Sbjct: 127 EHVTEEDIEDLM----KDSDKNNDGRID 150
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 71/148 (47%), Gaps = 23/148 (15%)
Query: 29 VSEVEALFELFKMISSSVVDDGLISKEEFQLA---LFKNRKKENLFANRIFDLFDVKRKG 85
++E +A F++F G IS +E L +N KE L A I + D G
Sbjct: 16 IAEFKAAFDMFDADGG-----GDISTKELGTVMRMLGQNPTKEELDA--IIEEVDEDGSG 68
Query: 86 VIDFSDF----VRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESE 141
IDF +F VR + E+++ F+++D + GFI+ +E+ ++L A +
Sbjct: 69 TIDFEEFLVMMVRQMKE-DAKGKSEEELANCFRIFDKNADGFIDIEELGEILRA----TG 123
Query: 142 MKLADETIEIILDKTFLDADVNQDGKID 169
+ +E IE ++ D+D N DG+ID
Sbjct: 124 EHVTEEDIEDLM----KDSDKNNDGRID 147
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 2/76 (2%)
Query: 96 LSVFHPNAPQEDKIDFS--FKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIIL 153
L +F AP ++ ++F ++ YD D++G+I E+K L L + + K+ ++
Sbjct: 91 LLIFRREAPLDNSVEFXKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYT 150
Query: 154 DKTFLDADVNQDGKID 169
D D N+DG++D
Sbjct: 151 DAXXKIFDKNKDGRLD 166
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 11/106 (10%)
Query: 78 LFDVKRKGVIDFSDFVRSLSV-------FHPNAPQ--EDKIDFS--FKLYDLDNTGFIER 126
+FD + G +D +D R L++ F +A E K DF F YD+ TG +E
Sbjct: 156 IFDKNKDGRLDLNDLARILALQENFLLQFKXDASSQVERKRDFEKIFAHYDVSRTGALEG 215
Query: 127 QEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCE 172
EV + ++ ++ + D N+DGKI K E
Sbjct: 216 PEVDGFVKDXXELVRPSISGGDLDKFRECLLTHCDXNKDGKIQKSE 261
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 13/108 (12%)
Query: 50 GLISKEEFQLALFKNRKK--ENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQED 107
G+IS E Q AL + I +FD + K ++FS+F V+ ++
Sbjct: 22 GVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT---GVWKYITDWQN 78
Query: 108 KIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDK 155
F+ YD DN+G I++ E+KQ L + +L+D+ +I++ K
Sbjct: 79 ----VFRTYDRDNSGMIDKNELKQA----LSGAGYRLSDQFHDILIRK 118
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 72/155 (46%), Gaps = 20/155 (12%)
Query: 31 EVEALFELFKMISSSVVDDGLISKEEFQLAL----FKNRKKENLFANRIFDLFDVKRKGV 86
E+ F+LF S G I +E ++A+ F+ +K+E ++ D G
Sbjct: 29 EIREAFDLFDTDGS-----GTIDAKELKVAMRALGFEPKKEE---IKKMISEIDKDGSGT 80
Query: 87 IDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLAD 146
IDF +F+ ++ ++I +F+L+D DN+G I ++++++ +L +
Sbjct: 81 IDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVA--------KELGE 132
Query: 147 ETIEIILDKTFLDADVNQDGKIDKCEWQNFVSKNP 181
E L + +AD N D +ID+ E+ + K
Sbjct: 133 NLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS 167
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 35.8 bits (81), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 50 GLISKEEFQLALFKNRKK--ENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQED 107
G+IS E Q AL + I +FD + K ++FS+F V+ ++
Sbjct: 41 GVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT---GVWKYITDWQN 97
Query: 108 KIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDK 155
F+ YD DN+G I++ E+KQ L +L+D+ +I++ K
Sbjct: 98 ----VFRTYDRDNSGMIDKNELKQALSGF----GYRLSDQFHDILIRK 137
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
Query: 100 HPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLD 159
H + E+++ +FK++D D G+I E++ ++I L KL DE +E ++ +
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGE----KLTDEEVEQMIK----E 53
Query: 160 ADVNQDGKID 169
AD++ DG+++
Sbjct: 54 ADLDGDGQVN 63
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 113 FKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFL-DADVNQDGKIDKC 171
F++ D D +GFIE E+K L + + A ET KTFL AD + DGKI
Sbjct: 47 FRILDNDQSGFIEEDELKYFLQRFESGARVLTASET------KTFLAAADHDGDGKIGAE 100
Query: 172 EWQNFV 177
E+Q V
Sbjct: 101 EFQEMV 106
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 50 GLISKEEFQLALFKNRKK--ENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQED 107
G+IS E Q AL + I +FD + K ++FS+F V+ ++
Sbjct: 40 GVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT---GVWKYITDWQN 96
Query: 108 KIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDK 155
F+ YD DN+G I++ E+KQ L +L+D+ +I++ K
Sbjct: 97 ----VFRTYDRDNSGMIDKNELKQALSGF----GYRLSDQFHDILIRK 136
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 50 GLISKEEFQLALFKNRKK--ENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQED 107
G+IS E Q AL + I +FD + K ++FS+F V+ ++
Sbjct: 22 GVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT---GVWKYITDWQN 78
Query: 108 KIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDK 155
F+ YD DN+G I++ E+KQ L +L+D+ +I++ K
Sbjct: 79 ----VFRTYDRDNSGMIDKNELKQALSGF----GYRLSDQFHDILIRK 118
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 50 GLISKEEFQLALFKNRKK--ENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQED 107
G+IS E Q AL + I +FD + K ++FS+F V+ ++
Sbjct: 19 GVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT---GVWKYITDWQN 75
Query: 108 KIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDK 155
F+ YD DN+G I++ E+KQ L +L+D+ +I++ K
Sbjct: 76 ----VFRTYDRDNSGMIDKNELKQALSGF----GYRLSDQFHDILIRK 115
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 50 GLISKEEFQLALFKNRKK--ENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQED 107
G+IS E Q AL + I +FD + K ++FS+F V+ ++
Sbjct: 18 GVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFT---GVWKYITDWQN 74
Query: 108 KIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDK 155
F+ YD DN+G I++ E+KQ L +L+D+ +I++ K
Sbjct: 75 ----VFRTYDRDNSGMIDKNELKQALSGF----GYRLSDQFHDILIRK 114
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCE 139
D G IDF +F+ ++ + E +I +F+++D D G+I E++ ++ L
Sbjct: 52 DADGNGTIDFPEFLTMMARKMKDTDSE-EIREAFRVFDKDGNGYISAAELRHVMTNLGE- 109
Query: 140 SEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
KL DE + D+ +A+++ DG+++ ++ FV
Sbjct: 110 ---KLTDEEV----DEMIREANIDGDGQVN---YEEFV 137
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 73 NRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQM 132
+++ D D + G I++S+FV ++++ ++++ +F+++D DN+G I E+ +
Sbjct: 408 DQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI 466
Query: 133 LIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSK 179
+S ET + +L + D N DG++D E+Q + K
Sbjct: 467 FGVSDVDS------ETWKSVLS----EVDKNNDGEVDFDEFQQMLLK 503
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 73 NRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQM 132
+++ D D + G I++S+FV ++++ ++++ +F+++D DN+G I E+ +
Sbjct: 409 DQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI 467
Query: 133 LIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSK 179
+S ET + +L + D N DG++D E+Q + K
Sbjct: 468 FGVSDVDS------ETWKSVLS----EVDKNNDGEVDFDEFQQMLLK 504
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 11/107 (10%)
Query: 73 NRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQM 132
+++ D D + G I++S+FV ++++ ++++ +F+++D DN+G I E+ +
Sbjct: 385 DQVLDAVDFDKNGYIEYSEFV-TVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI 443
Query: 133 LIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSK 179
+S ET + +L + D N DG++D E+Q + K
Sbjct: 444 FGVSDVDS------ETWKSVLS----EVDKNNDGEVDFDEFQQMLLK 480
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 29 VSEVEALFELFKMISSSVVDDGLISKEEFQLA---LFKNRKKENLFANRIFDLFDVKRKG 85
++E +A F++F G IS +E L + KE L A I + D G
Sbjct: 16 IAEFKAAFDMFDADGG-----GDISVKELGTVMRMLGQTPTKEELDA--IIEEVDEDGSG 68
Query: 86 VIDFSDF----VRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESE 141
IDF +F VR + E+++ F+++D + G+I+ +E+ ++ A S
Sbjct: 69 TIDFEEFLVMMVRQMKE-DAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRA----SG 123
Query: 142 MKLADETIEIILDKTFLDADVNQDGKID 169
+ DE IE ++ D D N DG+ID
Sbjct: 124 EHVTDEEIESLM----KDGDKNNDGRID 147
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 76/147 (51%), Gaps = 20/147 (13%)
Query: 31 EVEALFELFKMISSSVVDDGLISKEEFQLAL----FKNRKKENLFANRIFDLFDVKRKGV 86
E+ F+LF S G I +E ++A+ F+ +K+E I D+ D G
Sbjct: 9 EIREAFDLFDTDGS-----GTIDAKELKVAMRALGFEPKKEE--IKKMIADI-DKDGSGT 60
Query: 87 IDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLAD 146
IDF +F++ ++ ++I +F+L+D D TG I + +K+ + L E+ + D
Sbjct: 61 IDFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKR-VAKELGEN---MTD 116
Query: 147 ETIEIILDKTFLDADVNQDGKIDKCEW 173
E ++ ++D +AD + DG++++ E+
Sbjct: 117 EELQEMID----EADRDGDGEVNEEEF 139
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 11/93 (11%)
Query: 85 GVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKL 144
G IDF F+ ++ + E++I +F+++ D G+I +++ ++ L KL
Sbjct: 362 GTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNL----GEKL 417
Query: 145 ADETIEIILDKTFLDADVNQDGKIDKCEWQNFV 177
DE + D+ +A ++ DG+++ ++ FV
Sbjct: 418 TDEEV----DEMIREAGIDGDGQVN---YEQFV 443
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 107 DKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDA-DVNQD 165
D + +F + D D +GFIE E+K L ++ ET KTFL A D + D
Sbjct: 41 DDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGET------KTFLKAGDSDGD 94
Query: 166 GKIDKCEWQNFV 177
GKI EW V
Sbjct: 95 GKIGVDEWTALV 106
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 29 VSEVEALFELFKMISSSVVDDGLISKEEFQLA---LFKNRKKENLFANRIFDLFDVKRKG 85
++E +A F++F G IS +E L + KE L A I + D G
Sbjct: 16 IAEFKAAFDMFDADGG-----GDISVKELGTVMRMLGQTPTKEELDA--IIEEVDEDGSG 68
Query: 86 VIDFSDF----VRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESE 141
IDF +F VR + +E+ + F+++D + G+I+ +E+ ++ A S
Sbjct: 69 TIDFEEFLVMMVRQMKEDAKGKSEEELAEL-FRIFDRNADGYIDAEELAEIFRA----SG 123
Query: 142 MKLADETIEIILDKTFLDADVNQDGKID 169
+ DE IE ++ D D N DG+ID
Sbjct: 124 EHVTDEEIESLMK----DGDKNNDGRID 147
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 33.5 bits (75), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 85 GVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKL 144
G ++F++F ++ E+++ +FK++D D GFI E++ ++I L K+
Sbjct: 61 GQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLG----EKV 116
Query: 145 ADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSK 179
DE I D+ +AD + DG I+ E+ +S+
Sbjct: 117 TDEEI----DEMIREADFDGDGMINYEEFVWMISQ 147
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 5/124 (4%)
Query: 50 GLISKEEFQLALFKNRKKENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKI 109
G I+KE+ + L K+ K + + D D G ID+++F+ + + I
Sbjct: 67 GYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFI--AAALDRKQLSKKLI 124
Query: 110 DFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKID 169
+F+++D+DN G I E+ +L + + D + + D D N DGKID
Sbjct: 125 YCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVN---RVKRMIRDVDKNNDGKID 181
Query: 170 KCEW 173
E+
Sbjct: 182 FHEF 185
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 107 DKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDA-DVNQD 165
D+I F + D D +GFIE +E++ L + + + ET K FL A D + D
Sbjct: 42 DQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAET------KAFLAAGDTDGD 95
Query: 166 GKIDKCEWQNFV 177
GKI E+Q+ V
Sbjct: 96 GKIGVEEFQSLV 107
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 107 DKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDA-DVNQD 165
D+I F + D D +GFIE +E++ L + + + ET K FL A D + D
Sbjct: 41 DQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAET------KAFLAAGDTDGD 94
Query: 166 GKIDKCEWQNFV 177
GKI E+Q+ V
Sbjct: 95 GKIGVEEFQSLV 106
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 11/72 (15%)
Query: 106 EDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQD 165
E+++ +F+++D D GFI E++ ++ L KL DE + D+ +ADV+ D
Sbjct: 3 EEELKEAFRVFDKDQNGFISAAELRHVMTNLG----EKLTDEEV----DEMIREADVDGD 54
Query: 166 GKIDKCEWQNFV 177
G+I+ ++ FV
Sbjct: 55 GQIN---YEEFV 63
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 15/80 (18%)
Query: 112 SFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKC 171
+FK +D + GFI E++ +L L +L+DE ++ I++ T L D+ + K
Sbjct: 89 AFKTFDREGQGFISGAELRHVLSGL----GERLSDEEVDEIINLTDLQEDLEGNVK---- 140
Query: 172 EWQNFVSKNPSLLKIMTLPY 191
++ FV K+MT PY
Sbjct: 141 -YEEFVK------KVMTGPY 153
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 106 EDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQD 165
E+++ +FK++D D G+I E++ ++I L KL DE +E ++ +AD++ D
Sbjct: 3 EEELKEAFKVFDKDQNGYISASELRHVMINLGE----KLTDEEVEQMIK----EADLDGD 54
Query: 166 GKIDKCEWQNFV 177
G+++ ++ FV
Sbjct: 55 GQVN---YEEFV 63
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 32.7 bits (73), Expect = 0.14, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 31/57 (54%)
Query: 80 DVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIAL 136
D G IDF +F+ ++ + E++I +F+++D D G+I E++ ++ L
Sbjct: 11 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNL 67
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 112 SFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKC 171
+++ YD D++GFIE +E+K L LL ++ + D + D D N DGK++
Sbjct: 108 TWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELT 167
Query: 172 E 172
E
Sbjct: 168 E 168
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Query: 71 FANRIFDLFDVKRKGVIDFSDFVRSLSV-------FHPNAPQEDKIDFSFKLYDLDNTGF 123
+ + + LFD G ++ ++ R L V F + + +F+LYD D G+
Sbjct: 148 YTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGY 207
Query: 124 IERQEVKQMLIALLCE 139
I+ E+ L+ LCE
Sbjct: 208 IDENEL-DALLKDLCE 222
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 15/80 (18%)
Query: 112 SFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKC 171
+FK +D + GFI E++ +L L +L+DE ++ I++ T L D+ + K
Sbjct: 90 AFKTFDREGQGFISGAELRHVLSGL----GERLSDEEVDEIINLTDLQEDLEGNVK---- 141
Query: 172 EWQNFVSKNPSLLKIMTLPY 191
++ FV K+MT PY
Sbjct: 142 -YEEFVK------KVMTGPY 154
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 54/107 (50%), Gaps = 11/107 (10%)
Query: 73 NRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQM 132
+++ D D + G I++S+FV +++ ++++ +F+ +D DN+G I E+ +
Sbjct: 385 DQVLDAVDFDKNGYIEYSEFV-TVAXDRKTLLSRERLERAFRXFDSDNSGKISSTELATI 443
Query: 133 LIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSK 179
+S ET + +L + D N DG++D E+Q + K
Sbjct: 444 FGVSDVDS------ETWKSVLS----EVDKNNDGEVDFDEFQQXLLK 480
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 15/80 (18%)
Query: 112 SFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKC 171
+FK +D + GFI E++ +L AL +L+DE ++ I+ T L D+ + K
Sbjct: 89 AFKTFDREGQGFISGAELRHVLTAL----GERLSDEDVDEIIKLTDLQEDLEGNVK---- 140
Query: 172 EWQNFVSKNPSLLKIMTLPY 191
+++FV K+M PY
Sbjct: 141 -YEDFVK------KVMAGPY 153
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 15/80 (18%)
Query: 112 SFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKC 171
+FK +D + GFI E++ +L AL +L+DE ++ I+ T L D+ + K
Sbjct: 89 AFKTFDREGQGFISGAELRHVLTAL----GERLSDEDVDEIIKLTDLQEDLEGNVK---- 140
Query: 172 EWQNFVSKNPSLLKIMTLPY 191
+++FV K+M PY
Sbjct: 141 -YEDFVK------KVMAGPY 153
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 15/80 (18%)
Query: 112 SFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKC 171
+FK +D + GFI E++ +L AL +L+DE ++ I+ T L D+ + K
Sbjct: 86 AFKTFDREGQGFISGAELRHVLTAL----GERLSDEDVDEIIKLTDLQEDLEGNVK---- 137
Query: 172 EWQNFVSKNPSLLKIMTLPY 191
+++FV K+M PY
Sbjct: 138 -YEDFVK------KVMAGPY 150
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 15/80 (18%)
Query: 112 SFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKC 171
+FK +D + GFI E++ +L AL +L+DE ++ I+ T L D+ + K
Sbjct: 87 AFKTFDREGQGFISGAELRHVLTAL----GERLSDEDVDEIIKLTDLQEDLEGNVK---- 138
Query: 172 EWQNFVSKNPSLLKIMTLPY 191
+++FV K+M PY
Sbjct: 139 -YEDFVK------KVMAGPY 151
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 15/80 (18%)
Query: 112 SFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKC 171
+FK +D + GFI E++ +L AL +L+DE ++ I+ T L D+ + K
Sbjct: 89 AFKTFDREGQGFISGAELRHVLTAL----GERLSDEDVDEIIKLTDLQEDLEGNVK---- 140
Query: 172 EWQNFVSKNPSLLKIMTLPY 191
+++FV K+M PY
Sbjct: 141 -YEDFVK------KVMAGPY 153
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 11/77 (14%)
Query: 101 PNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDA 160
+ E++I +F+++D D G+I E++ ++ L KL DE + D+ +A
Sbjct: 3 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE----KLTDEEV----DEMIREA 54
Query: 161 DVNQDGKIDKCEWQNFV 177
D++ DG+++ ++ FV
Sbjct: 55 DIDGDGQVN---YEEFV 68
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 11/77 (14%)
Query: 101 PNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDA 160
+ E++I +F+++D D G+I E++ ++ L KL DE + D+ +A
Sbjct: 2 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGE----KLTDEEV----DEMIREA 53
Query: 161 DVNQDGKIDKCEWQNFV 177
D++ DG+++ ++ FV
Sbjct: 54 DIDGDGQVN---YEEFV 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 11/72 (15%)
Query: 106 EDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQD 165
E++I +F+++D D G+I E++ ++ L KL DE + D+ +AD++ D
Sbjct: 5 EEEIREAFRVFDKDGNGYISAAELRHVMTNLG----EKLTDEEV----DEMIREADIDGD 56
Query: 166 GKIDKCEWQNFV 177
G+++ ++ FV
Sbjct: 57 GQVN---YEEFV 65
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Query: 23 SQTAFSVSEVEALFELFKMISSSVVD-----DGLISKEEFQLALFKNRKKENL--FANRI 75
+QT VEA F+ + V+ +G + L L+ KK + + +
Sbjct: 62 AQTQRHQEAVEAFFKKIGLDYGKEVEFPAFVNGWKELAKHDLKLWSQNKKSLIRNWGEAV 121
Query: 76 FDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIA 135
FD+FD G I ++ ++ P ++ + +FK DLDN+G ++ E+ + +
Sbjct: 122 FDIFDKDGSGSISLDEW-KTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEMTRQHLG 180
Query: 136 LL 137
Sbjct: 181 FW 182
>pdb|2VRG|A Chain A, Structure Of Human Mcfd2
Length = 124
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 103 APQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLA-----DETIEIILDKTF 157
+PQE ++ + FK++D D ++ E+ + + E + A DE I II D
Sbjct: 46 SPQELQLHY-FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINII-DGVL 103
Query: 158 LDADVNQDGKIDKCEW 173
D D N DG ID E+
Sbjct: 104 RDDDKNNDGYIDYAEF 119
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 7/70 (10%)
Query: 27 FSVSEVEALFELFKMISSSVVDDGLISKEEFQLALFKNRKKENLFANRIFDLFD---VKR 83
S E+ L ELFKMI + + G I+ +E + L R L + I DL D + +
Sbjct: 17 LSEEEIGGLKELFKMIDTD--NSGTITFDELKDGL--KRVGSELMESEIKDLMDAADIDK 72
Query: 84 KGVIDFSDFV 93
G ID+ +F+
Sbjct: 73 SGTIDYGEFI 82
>pdb|3LCP|C Chain C, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
pdb|3LCP|D Chain D, Crystal Structure Of The Carbohydrate Recognition Domain
Of Complex With Mcfd2
Length = 93
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 103 APQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLA-----DETIEIILDKTF 157
+PQE ++ + FK++D D ++ E+ + + E + A DE I II D
Sbjct: 15 SPQELQLHY-FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINII-DGVL 72
Query: 158 LDADVNQDGKIDKCEW 173
D D N DG ID E+
Sbjct: 73 RDDDKNNDGYIDYAEF 88
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 77/154 (50%), Gaps = 20/154 (12%)
Query: 30 SEVEALFELFKMISSSVVDDGLISKEEFQLAL----FKNRKKENLFANRIFDLFDVKRKG 85
E+ F+LF + G I +E ++A+ F+ +K+E ++ D + G
Sbjct: 6 QEIREAFDLFDADGT-----GTIDVKELKVAMRALGFEPKKEE---IKKMISEIDKEGTG 57
Query: 86 VIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLA 145
++F DF+ ++ +++I +FKL+D D TG I + +K+ + L E+ L
Sbjct: 58 KMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKR-VAKELGEN---LT 113
Query: 146 DETIEIILDKTFLDADVNQDGKIDKCEWQNFVSK 179
DE ++ ++D +AD + DG++ + E+ + K
Sbjct: 114 DEELQEMID----EADRDGDGEVSEQEFLRIMKK 143
>pdb|3A4U|B Chain B, Crystal Structure Of Mcfd2 In Complex With Carbohydrate
Recognition Domain Of Ergic-53
Length = 143
Score = 31.6 bits (70), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 103 APQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLA-----DETIEIILDKTF 157
+PQE ++ + FK++D D ++ E+ + + E + A DE I II D
Sbjct: 65 SPQELQLHY-FKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINII-DGVL 122
Query: 158 LDADVNQDGKIDKCEW 173
D D N DG ID E+
Sbjct: 123 RDDDKNNDGYIDYAEF 138
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 107 DKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDA-DVNQD 165
D + +F + D +GFIE E+K L ++ ET KTFL A D + D
Sbjct: 41 DDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGET------KTFLKAGDSDGD 94
Query: 166 GKIDKCEWQNFV 177
GKI EW V
Sbjct: 95 GKIGVDEWTALV 106
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 71 FANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVK 130
+ + +FD+FD G I ++ ++ +P E+ + +F+ DLDN+G ++ E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMT 172
Query: 131 QMLIALL 137
+ +
Sbjct: 173 RQHLGFW 179
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 31.2 bits (69), Expect = 0.39, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 106 EDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQD 165
E++I +F+++D D G+I E++ ++ L KL DE + D+ +AD++ D
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEV----DEMIREADIDGD 52
Query: 166 GKIDKCEW 173
G+++ E+
Sbjct: 53 GQVNYEEF 60
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 31.2 bits (69), Expect = 0.44, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 106 EDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQD 165
E++I +F+++D D G+I E++ ++ L KL DE + D+ +AD++ D
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEV----DEMIREADIDGD 55
Query: 166 GKIDKCEW 173
G+++ E+
Sbjct: 56 GQVNYEEF 63
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 17/102 (16%)
Query: 85 GVIDFSDFVRSLSVFHPN--APQEDKIDF-----SFKLYDLDNTGFIERQEVKQMLIALL 137
G +DF DFV + P A D I +F+ +D + G I E+++ + ALL
Sbjct: 62 GHVDFDDFV---ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALL 118
Query: 138 CESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSK 179
++ IE I+ D D+N DG++D E+ +S+
Sbjct: 119 GH---QVGHRDIEEII----RDVDLNGDGRVDFEEFVRMMSR 153
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 31.2 bits (69), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 15/80 (18%)
Query: 112 SFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKC 171
+FK +D + GFI E++ +L L +L+DE ++ I++ T L D+ + K
Sbjct: 89 AFKTFDREGQGFISGAELRHVLSGL----GERLSDEEVDEIINLTDLQEDLEGNVK---- 140
Query: 172 EWQNFVSKNPSLLKIMTLPY 191
++ FV K+M PY
Sbjct: 141 -YEEFVK------KVMAGPY 153
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 30.8 bits (68), Expect = 0.51, Method: Composition-based stats.
Identities = 19/68 (27%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 106 EDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQD 165
E++I +F+++D D G+I E++ ++ L KL DE + D+ +AD++ D
Sbjct: 4 EEEIREAFRVFDKDGNGYISAAELRHVMTNL----GEKLTDEEV----DEMIREADIDGD 55
Query: 166 GKIDKCEW 173
G+++ E+
Sbjct: 56 GQVNYEEF 63
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 11/105 (10%)
Query: 75 IFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLI 134
I D R G ID+S+FV ++++ + +DK++ +F+ +D D G I E+ +
Sbjct: 112 ILGAADFDRNGYIDYSEFV-TVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVFG 170
Query: 135 ALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSK 179
L E K E I I D N DG +D E+ + K
Sbjct: 171 --LDHLESKTWKEMISGI--------DSNNDGDVDFEEFCKMIQK 205
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 71 FANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVK 130
+ + +FD+FD G I ++ ++ +P ++ + +F+ DLDN+G ++ E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Query: 131 QMLIALL 137
+ +
Sbjct: 173 RQHLGFW 179
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 43/76 (56%), Gaps = 11/76 (14%)
Query: 102 NAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDAD 161
+ E++I +F+++D D G+I +++ ++ L KL DE + D+ +AD
Sbjct: 2 DTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGE----KLTDEEV----DEMIREAD 53
Query: 162 VNQDGKIDKCEWQNFV 177
++ DG+++ +++FV
Sbjct: 54 IDGDGQVN---YEDFV 66
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 71 FANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVK 130
+ + +FD+FD G I ++ ++ +P ++ + +F+ DLDN+G ++ E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Query: 131 QMLIALL 137
+ +
Sbjct: 173 RQHLGFW 179
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/67 (20%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 71 FANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVK 130
+ + +FD+FD G I ++ ++ +P ++ + +F+ DLDN+G ++ E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNSGDLDVDEMT 172
Query: 131 QMLIALL 137
+ +
Sbjct: 173 RQHLGFW 179
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%), Gaps = 11/72 (15%)
Query: 106 EDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQD 165
E++I +F++ D D G+I E++ ++ L KL DE + D+ +AD++ D
Sbjct: 28 EEEIREAFRVEDKDGNGYISAAELRHVMTNLGE----KLTDEEV----DEMIREADIDGD 79
Query: 166 GKIDKCEWQNFV 177
G+++ ++ FV
Sbjct: 80 GQVN---YEEFV 88
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 75 IFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLI 134
I D R G ID+S+FV ++++ + +DK++ +F+ +D D G I E+ +
Sbjct: 395 ILGAADFDRNGYIDYSEFV-TVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASVF- 452
Query: 135 ALLCESEMKLADETIEIILDKTFLDADVNQDGKID 169
L E K E I I D N DG +D
Sbjct: 453 -GLDHLESKTWKEMISGI--------DSNNDGDVD 478
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 30.4 bits (67), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 64/150 (42%), Gaps = 19/150 (12%)
Query: 27 FSVSEVEALFELFKMISSSVVDDGLISKEEFQ---LALFKNRKKENLFANRIFDLFDVKR 83
F S+++ E F MI + DG I KE+ ++ KN E L + +
Sbjct: 1 FDQSQIQEFKEAFNMIDQNR--DGFIDKEDLHDMLASMGKNPTDEYL------EGMMSEA 52
Query: 84 KGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMK 143
G I+F+ F+ ED I +F +D + +GFI ++++L
Sbjct: 53 PGPINFTMFLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTT-------- 104
Query: 144 LADETIEIILDKTFLDADVNQDGKIDKCEW 173
+ D + +D+ + +A +++ G + E+
Sbjct: 105 MGDRFTDEEVDEMYREAPIDKKGNFNYVEF 134
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 7/77 (9%)
Query: 102 NAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDA- 160
A D I +F + D D +GFIE E+K + + + L D K FL A
Sbjct: 37 TAKSADDIKKAFFVIDQDKSGFIEEDELK-LFLQVFSAGARALTDAET-----KAFLKAG 90
Query: 161 DVNQDGKIDKCEWQNFV 177
D + DG I EW V
Sbjct: 91 DSDGDGAIGVDEWAALV 107
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 27 FSVSEVEALFELFKMISSSVVDDGLISKEEFQLALFKNRKKENLFANRIFDLFDVKRKGV 86
F +E+E E F +I + DG+I K++ + F + N+ N D + G
Sbjct: 1 FDETEIEDFKEAFTVIDQNA--DGIIDKDDLR-ETFAAMGRLNV-KNEELDAMIKEASGP 56
Query: 87 IDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQML 133
I+F+ F+ A ED I +FK+ D D G I++ ++++L
Sbjct: 57 INFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELL 103
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 14/67 (20%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 71 FANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVK 130
+ + +FD+FD G I ++ ++ +P ++ + +F+ DLDN G ++ E+
Sbjct: 114 WGDAVFDIFDKDGSGTITLDEW-KAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMT 172
Query: 131 QMLIALL 137
+ +
Sbjct: 173 RQHLGFW 179
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 30.0 bits (66), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 72 ANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQ 131
A R+F+ FD + G + +F F P QED + F F+ D+D G + E
Sbjct: 3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKF-FEEIDVDGNGELNADEFTS 61
Query: 132 MLIALL 137
+ +L
Sbjct: 62 CIEKML 67
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 107 DKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDA-DVNQD 165
D + +F + D D +GFIE E+K L ++ ET KTFL A D + D
Sbjct: 42 DDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGET------KTFLKAGDSDGD 95
Query: 166 GKIDKCEWQNFV 177
GKI E+ V
Sbjct: 96 GKIGVDEFTALV 107
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 30.0 bits (66), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 113 FKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLD-ADVNQDGKIDKC 171
FK D D +GFIE +E+K +L + + ET K FL AD + DGKI
Sbjct: 48 FKAIDADASGFIEEEELKFVLKSFAADGRDLTDAET------KAFLKAADKDGDGKIGID 101
Query: 172 EWQNFV 177
E++ V
Sbjct: 102 EFETLV 107
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 113 FKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCE 172
F++ D D +GFIE +E+K +L L D + +L D + DGKI E
Sbjct: 47 FEILDKDQSGFIEEEELKGVLKGFSAHGR-DLNDTETKALL----AAGDSDHDGKIGADE 101
Query: 173 WQNFVSK 179
+ V++
Sbjct: 102 FAKMVAQ 108
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 30.0 bits (66), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 107 DKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDA-DVNQD 165
D + +F + D +GFIE E+K L ++ ET KTFL A D + D
Sbjct: 41 DDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARALTDGET------KTFLKAGDSDGD 94
Query: 166 GKIDKCEWQNFV 177
GKI +W V
Sbjct: 95 GKIGVDDWTALV 106
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 112 SFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKC 171
+FK +D + GFI E++ +L AL +L+DE ++ I+ T L D+ + K
Sbjct: 86 AFKTFDREGQGFISGAELRHVLTAL----GERLSDEDVDEIIKLTDLQEDLEGNVK---- 137
Query: 172 EWQNFVSK 179
+++FV K
Sbjct: 138 -YEDFVKK 144
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 10/66 (15%)
Query: 113 FKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETI-EIILDKTFLDADVNQDGKIDKC 171
F+++D + G+I+ +E+K ML A ETI E +++ D D N DG+ID
Sbjct: 13 FRMFDKNADGYIDLEELKIMLQA---------TGETITEDDIEELMKDGDKNNDGRIDYD 63
Query: 172 EWQNFV 177
E+ F+
Sbjct: 64 EFLEFM 69
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 10/66 (15%)
Query: 113 FKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETI-EIILDKTFLDADVNQDGKIDKC 171
F+++D + G+I+ +E+K ML A ETI E +++ D D N DG+ID
Sbjct: 11 FRMFDKNADGYIDLEELKIMLQA---------TGETITEDDIEELMKDGDKNNDGRIDYD 61
Query: 172 EWQNFV 177
E+ F+
Sbjct: 62 EFLEFM 67
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 43/73 (58%), Gaps = 13/73 (17%)
Query: 107 DKIDFSFKLYDLDNTGFIERQEVKQMLIAL-LCESEMKLADETIEIILDKTFLDADVNQD 165
++I +FK++D D GFI +QE+ + +L +E++L E+I+ + D++ D
Sbjct: 36 EEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVEL-----EVIIQRL----DMDGD 86
Query: 166 GKIDKCEWQNFVS 178
G++D ++ FV+
Sbjct: 87 GQVD---FEEFVT 96
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 43/87 (49%), Gaps = 11/87 (12%)
Query: 92 FVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETI-E 150
VR + +E+ D F+++D + G+I+ +E+K ML A ETI E
Sbjct: 1 MVRCMKDDSKGKTEEELSDL-FRMFDKNADGYIDLEELKIMLQA---------TGETITE 50
Query: 151 IILDKTFLDADVNQDGKIDKCEWQNFV 177
+++ D D N DG+ID E+ F+
Sbjct: 51 DDIEELMKDGDKNNDGRIDYDEFLEFM 77
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 27 FSVSEVEALFELFKMISSSVVDDGLISKEEFQLALFKNRKKENLFANRIFDLFDVKRKGV 86
F +E+E E F +I + DG+I K++ + F + N+ N D + G
Sbjct: 19 FDETEIEDFKEAFTVIDQNA--DGIIDKDDLR-ETFAAMGRLNV-KNEELDAMIKEASGP 74
Query: 87 IDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQML 133
I+F+ F+ A ED I +FK+ D D G I++ ++++L
Sbjct: 75 INFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELL 121
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 10/66 (15%)
Query: 113 FKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETI-EIILDKTFLDADVNQDGKIDKC 171
F+++D + G+I+ +E+K ML A ETI E +++ D D N DG+ID
Sbjct: 16 FRMFDKNADGYIDLEELKIMLQA---------TGETITEDDIEELMKDGDKNNDGRIDYD 66
Query: 172 EWQNFV 177
E+ F+
Sbjct: 67 EFLEFM 72
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 106 EDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEII--------LDKTF 157
+K+ ++F LYD++ G+I ++E ++A++ + T I+ +++ F
Sbjct: 8 HEKLKWAFNLYDINKDGYITKEE----MLAIMKSIYDMMGRHTYPILREDAPAEHVERFF 63
Query: 158 LDADVNQDGKIDKCEWQNFVSKNPSLLKIMTL 189
D NQDG + E+ K+ +++ M L
Sbjct: 64 EKMDRNQDGVVTIEEFLEACQKDENIMSSMQL 95
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 79 FDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLC 138
D G I ++DF+ + ++ +++ FK +D+D G I +E+K++
Sbjct: 102 IDSNASGQIHYTDFLAA-TIDKQTYLKKEVCLIPFKFFDIDGNGKISVEELKRIF----- 155
Query: 139 ESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSK 179
+ + I+ +D + D+N DG+ID E+ +SK
Sbjct: 156 -GRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSK 195
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 113 FKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCE 172
FK +D + G I E+ L L S ADE + + + D + DG ID E
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLGSTS----ADE-----VQRMMAEIDTDGDGFIDFNE 59
Query: 173 WQNFVSKNPSLLK 185
+ +F + NP L+K
Sbjct: 60 FISFCNANPGLMK 72
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 73 NRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQM 132
N + + DV I+FS+F+ +S + E ++ +FK++D + G I E+K +
Sbjct: 49 NDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHV 108
Query: 133 LIAL 136
L ++
Sbjct: 109 LTSI 112
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 113 FKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCE 172
FK +D + G I E+ L L S ADE + + + D + DG ID E
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLGSTS----ADE-----VQRMMAEIDTDGDGFIDFNE 58
Query: 173 WQNFVSKNPSLLK 185
+ +F + NP L+K
Sbjct: 59 FISFCNANPGLMK 71
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 51/95 (53%), Gaps = 8/95 (8%)
Query: 87 IDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLAD 146
++F DF+ ++ +++I +FKL+D D TG I + +K+ + L E+ L D
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKR-VAKELGEN---LTD 56
Query: 147 ETIEIILDKTFLDADVNQDGKIDKCEWQNFVSKNP 181
E ++ ++D +AD + DG++ + E+ + K
Sbjct: 57 EELQEMID----EADRDGDGEVSEQEFLRIMKKTS 87
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 17/102 (16%)
Query: 85 GVIDFSDFVRSLSVFHPN--APQEDKIDF-----SFKLYDLDNTGFIERQEVKQMLIALL 137
G +DF DFV + P A D I +F+ +D + G I E+++ + LL
Sbjct: 76 GHVDFDDFV---ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLL 132
Query: 138 CESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSK 179
++ IE I+ D D+N DG++D E+ +S+
Sbjct: 133 GH---QVGHRDIEEII----RDVDLNGDGRVDFEEFVRMMSR 167
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 17/102 (16%)
Query: 85 GVIDFSDFVRSLSVFHPN--APQEDKIDF-----SFKLYDLDNTGFIERQEVKQMLIALL 137
G +DF DFV + P A D I +F+ +D + G I E+++ + LL
Sbjct: 62 GHVDFDDFV---ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLL 118
Query: 138 CESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSK 179
++ IE I+ D D+N DG++D E+ +S+
Sbjct: 119 GH---QVGHRDIEEII----RDVDLNGDGRVDFEEFVRMMSR 153
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 73 NRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQM 132
N + + DV I+FS+F+ +S + E ++ +FK++D + G I E+K +
Sbjct: 49 NDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHV 108
Query: 133 LIAL 136
L ++
Sbjct: 109 LTSI 112
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 10/66 (15%)
Query: 113 FKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETI-EIILDKTFLDADVNQDGKIDKC 171
F+++D + G+I+ E+K ML A ETI E +++ D D N DG+ID
Sbjct: 12 FRMFDKNADGYIDLDELKIMLQA---------TGETITEDDIEELMKDGDKNNDGRIDYD 62
Query: 172 EWQNFV 177
E+ F+
Sbjct: 63 EFLEFM 68
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 103 APQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADV 162
E+++ F+++D + GFI+ +E+ ++L A + IE ++ D+D
Sbjct: 6 GKSEEELANCFRIFDKNADGFIDIEELGEILRA--------TGEHVIEEDIEDLMKDSDK 57
Query: 163 NQDGKID 169
N DG+ID
Sbjct: 58 NNDGRID 64
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 34/64 (53%)
Query: 73 NRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQM 132
N + + DV I+FS+F+ +S + E ++ +FK++D + G I E+K +
Sbjct: 50 NDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHV 109
Query: 133 LIAL 136
L ++
Sbjct: 110 LTSI 113
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/74 (24%), Positives = 36/74 (48%), Gaps = 14/74 (18%)
Query: 109 IDFSFKLYDLDNTGFIERQEVKQMLIAL---LCESEMKLADETIEIILDKTFLDADVNQD 165
+ +F+ +D D G I E+++ + L L + E LD +ADV+QD
Sbjct: 8 LQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEE-----------LDAMIREADVDQD 56
Query: 166 GKIDKCEWQNFVSK 179
G+++ E+ +++
Sbjct: 57 GRVNYEEFARMLAQ 70
>pdb|2J5L|A Chain A, Structure Of A Plasmodium Falciparum Apical Membrane
Antigen 1-Fab F8.12.19 Complex
Length = 581
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/78 (20%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 29 VSEVEALFELFKMISSSVVDDGLISKEEFQLALFKNRKKENLFAN-----RIFDLFDVKR 83
+++ E + E FK ++S++ + F+ +K+ K + N + ++F+VK
Sbjct: 325 LTDYEKIKEGFKNKNASMIKSAFLPTGAFKADRYKSHGKGYNWGNYNRETQKCEIFNVKP 384
Query: 84 KGVIDFSDFVRSLSVFHP 101
+I+ S ++ + ++ HP
Sbjct: 385 TCLINNSSYIATTALSHP 402
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 73 NRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQM 132
+ I D R G I++S+FV ++ + +++ +F+ +D D +G I +E+ ++
Sbjct: 364 DHILQSVDFDRNGYIEYSEFV-TVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRL 422
Query: 133 LIALLCESEMKLADETIEIILDKTFLDADVNQDGKID 169
++ DET +L + D N DG++D
Sbjct: 423 F------GVTEVDDETWHQVLQ----ECDKNNDGEVD 449
>pdb|1IZN|B Chain B, Crystal Structure Of Actin Filament Capping Protein Capz
pdb|1IZN|D Chain D, Crystal Structure Of Actin Filament Capping Protein Capz
pdb|3LK3|B Chain B, Crystal Structure Of Capz Bound To The Cpi And Csi
Uncapping Motifs From Carmil
pdb|3LK4|B Chain B, Crystal Structure Of Capz Bound To The Uncapping Motif
From Cd2ap
pdb|3LK4|E Chain E, Crystal Structure Of Capz Bound To The Uncapping Motif
From Cd2ap
pdb|3LK4|H Chain H, Crystal Structure Of Capz Bound To The Uncapping Motif
From Cd2ap
pdb|3LK4|K Chain K, Crystal Structure Of Capz Bound To The Uncapping Motif
From Cd2ap
pdb|3LK4|N Chain N, Crystal Structure Of Capz Bound To The Uncapping Motif
From Cd2ap
pdb|3LK4|Q Chain Q, Crystal Structure Of Capz Bound To The Uncapping Motif
From Cd2ap
pdb|3LK4|T Chain T, Crystal Structure Of Capz Bound To The Uncapping Motif
From Cd2ap
pdb|3LK4|W Chain W, Crystal Structure Of Capz Bound To The Uncapping Motif
From Cd2ap
pdb|3LK4|Z Chain Z, Crystal Structure Of Capz Bound To The Uncapping Motif
From Cd2ap
pdb|3LK4|2 Chain 2, Crystal Structure Of Capz Bound To The Uncapping Motif
From Cd2ap
pdb|3LK4|5 Chain 5, Crystal Structure Of Capz Bound To The Uncapping Motif
From Cd2ap
pdb|3LK4|8 Chain 8, Crystal Structure Of Capz Bound To The Uncapping Motif
From Cd2ap
pdb|2KZ7|B Chain B, Solution Structure Of The Carmil Cah3aB DOMAIN BOUND TO
CAPPING Protein (Cp)
pdb|3AAA|B Chain B, Crystal Structure Of Actin Capping Protein In Complex With
V-1
pdb|3AAE|B Chain B, Crystal Structure Of Actin Capping Protein In Complex With
Carmil Fragment
pdb|3AAE|D Chain D, Crystal Structure Of Actin Capping Protein In Complex With
Carmil Fragment
pdb|3AAE|F Chain F, Crystal Structure Of Actin Capping Protein In Complex With
Carmil Fragment
pdb|3AAE|H Chain H, Crystal Structure Of Actin Capping Protein In Complex With
Carmil Fragment
pdb|3AAE|J Chain J, Crystal Structure Of Actin Capping Protein In Complex With
Carmil Fragment
Length = 277
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 133 LIALLCESEMKLADETIEIILDKT----FLDADVNQDGKIDKCEWQN 175
L+ LCE + D+ ++I DK +L D N+DG + W N
Sbjct: 31 LVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSN 77
>pdb|2KXP|B Chain B, Solution Nmr Structure Of V-1 Bound To Capping Protein
(Cp)
Length = 270
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 133 LIALLCESEMKLADETIEIILDKT----FLDADVNQDGKIDKCEWQN 175
L+ LCE + D+ ++I DK +L D N+DG + W N
Sbjct: 30 LVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSN 76
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Query: 102 NAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDA- 160
+ D I +F D D +GFIE E+K L + ET K FL A
Sbjct: 37 SGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAET------KAFLKAG 90
Query: 161 DVNQDGKIDKCEWQNFV 177
D + DG I EW V
Sbjct: 91 DSDGDGAIGVEEWVALV 107
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Query: 102 NAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDA- 160
+ D I +F D D +GFIE E+K L + ET K FL A
Sbjct: 36 SGKSADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAET------KAFLKAG 89
Query: 161 DVNQDGKIDKCEWQNFV 177
D + DG I EW V
Sbjct: 90 DSDGDGAIGVEEWVALV 106
>pdb|3AA0|B Chain B, Crystal Structure Of Actin Capping Protein In Complex With
The Cp- Binding Motif Derived From Carmil
pdb|3AA1|B Chain B, Crystal Structure Of Actin Capping Protein In Complex With
The Cp- Binding Motif Derived From Ckip-1
pdb|3AA6|B Chain B, Crystal Structure Of Actin Capping Protein In Complex With
The Cp- Binding Motif Derived From Cd2ap
pdb|3AA7|B Chain B, Crystal Structure Of Actin Capping Protein
Length = 244
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 133 LIALLCESEMKLADETIEIILDKT----FLDADVNQDGKIDKCEWQN 175
L+ LCE + D+ ++I DK +L D N+DG + W N
Sbjct: 31 LVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSN 77
>pdb|3LK2|B Chain B, Crystal Structure Of Capz Bound To The Uncapping Motif
From Carmil
Length = 243
Score = 27.7 bits (60), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 133 LIALLCESEMKLADETIEIILDKT----FLDADVNQDGKIDKCEWQN 175
L+ LCE + D+ ++I DK +L D N+DG + W N
Sbjct: 31 LVPSLCEDLLSSVDQPLKIARDKVVGKDYLLCDYNRDGDSYRSPWSN 77
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 47/97 (48%), Gaps = 11/97 (11%)
Query: 73 NRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQM 132
+ I D R G I++S+FV ++ + +++ +F+ +D D +G I +E+ ++
Sbjct: 90 DHILQSVDFDRNGYIEYSEFV-TVCMDKQLLLSRERLLAAFQQFDSDGSGKITNEELGRL 148
Query: 133 LIALLCESEMKLADETIEIILDKTFLDADVNQDGKID 169
++ DET +L + D N DG++D
Sbjct: 149 FGV------TEVDDETWHQVLQ----ECDKNNDGEVD 175
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 85 GVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKL 144
G +F DF+ + +++I +FKL+D D TG I + +K++ L L
Sbjct: 82 GKXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG----ENL 137
Query: 145 ADETIEIILDKTFLDADVNQDGKIDKCEW 173
DE ++ +D +AD + DG++ + E+
Sbjct: 138 TDEELQEXID----EADRDGDGEVSEQEF 162
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 109 IDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKI 168
++ +FK D + G++ E++ ++ L ++ L+ + ++ K AD N DGKI
Sbjct: 9 LEAAFKKLDANGDGYVTALELQTFMVTL--DAYKALSKDKVKEASAKLIKMADKNSDGKI 66
Query: 169 DKCEWQNFVSKNPSLL 184
K + F++ N LL
Sbjct: 67 SK---EEFLNANAELL 79
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 79 FDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIAL 136
DV I+FS+F+ +S E ++ +FK++D + G I E+K +L ++
Sbjct: 56 IDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSI 113
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 27.3 bits (59), Expect = 6.0, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Query: 50 GLISKEEFQLALFK--NRKKENLFANRIFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQED 107
G++ E+F+ L E FA RI + D R GV+ F F+ +S + D
Sbjct: 740 GMMDCEDFRACLISMGYNMGEAEFA-RIMSIVDPNRMGVVTFQAFIDFMSRETADTDTAD 798
Query: 108 KIDFSFKLYDLDNTGFIERQEVKQML 133
++ SFK+ D +I E+++ L
Sbjct: 799 QVMASFKILAGDKN-YITVDELRREL 823
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 73/147 (49%), Gaps = 20/147 (13%)
Query: 31 EVEALFELFKMISSSVVDDGLISKEEFQLAL----FKNRKKENLFANRIFDLFDVKRKGV 86
E+ F LF M +DG + E ++A+ F+ K+E L + D +D + + +
Sbjct: 24 EIYEAFSLFDM-----NNDGFLDYHELKVAMKALGFELPKREIL---DLIDEYDSEGRHL 75
Query: 87 IDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLIALLCESEMKLAD 146
+ + DF + D+I +F+L+D D+TG I + +++ + L E+ L D
Sbjct: 76 MKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRR-VAKELGET---LTD 131
Query: 147 ETIEIILDKTFLDADVNQDGKIDKCEW 173
E + ++++ LD DG+I++ E+
Sbjct: 132 EELRAMIEEFDLDG----DGEINENEF 154
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 4/109 (3%)
Query: 25 TAFSVSEVEALFELFKMISSSVVDDGLISKEEFQLALFKNRKKENLFANRIFDLFDVKRK 84
+ F ++++ E F +I + DG+I K++ + F + N+ N D +
Sbjct: 4 SMFDQTQIQDFKEAFTVIDQNR--DGIIDKDDLR-ETFAAMGRLNV-KNEELDAMIKEAS 59
Query: 85 GVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQML 133
G I+F+ F+ A ED I +FK+ D D G I++ ++++L
Sbjct: 60 GPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELL 108
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 113 FKLYDLDNTGFIERQEVKQMLIALLCESEMKLADETIEIILDKTFLD-ADVNQDGKIDKC 171
F+ D D +G+++ E+K L ++ ET K+ +D AD + DGKI
Sbjct: 47 FRFIDNDQSGYLDGDELKYFLQKFQSDARELTESET------KSLMDAADNDGDGKIGAD 100
Query: 172 EWQNFV 177
E+Q V
Sbjct: 101 EFQEMV 106
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 5/99 (5%)
Query: 75 IFDLFDVKRKGVIDFSDFVRSLSVFHPNAPQEDKIDFSFKLYDLDNTGFIERQEVKQMLI 134
+ D D G ID+++F+ + + I +F+++D+DN G I E+ +L
Sbjct: 95 LLDQIDSDGSGNIDYTEFL--AAAIDRRQLSKKLIYCAFRVFDVDNDGEITTAELAHVLF 152
Query: 135 ALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEW 173
+ + + + K + D N DGKID E+
Sbjct: 153 N--GNKRGNITERDVNQV-KKMIREVDKNGDGKIDFYEF 188
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 26.9 bits (58), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 56/112 (50%), Gaps = 14/112 (12%)
Query: 74 RIFDLFDVKRKGVIDFSDF----VRSLSV-FHPNAPQEDKIDFSFKLYDLDNTGFIERQE 128
++ D FD G IDF F R L +P Q+ ++ +F+LYD + G+I
Sbjct: 54 QLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNPEQMQQ-ELREAFRLYDKEGNGYISTDV 112
Query: 129 VKQMLIALLCESEMKLADETIEIILDKTFLDADVNQDGKIDKCEWQNFVSKN 180
+++ +L E + L+ E ++ ++D+ +DAD + G +D E+ ++
Sbjct: 113 MRE----ILAELDETLSSEDLDAMIDE--IDADGS--GTVDFEEFMGVMTGG 156
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,728,694
Number of Sequences: 62578
Number of extensions: 212638
Number of successful extensions: 976
Number of sequences better than 100.0: 225
Number of HSP's better than 100.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 703
Number of HSP's gapped (non-prelim): 298
length of query: 213
length of database: 14,973,337
effective HSP length: 95
effective length of query: 118
effective length of database: 9,028,427
effective search space: 1065354386
effective search space used: 1065354386
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)