Query 040253
Match_columns 338
No_of_seqs 143 out of 1835
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 10:11:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/040253.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/040253hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2c29_D Dihydroflavonol 4-reduc 100.0 1.1E-49 3.8E-54 355.4 27.8 331 1-331 1-331 (337)
2 3m2p_A UDP-N-acetylglucosamine 100.0 1.4E-47 4.9E-52 338.0 25.7 296 5-329 2-303 (311)
3 2p4h_X Vestitone reductase; NA 100.0 5.9E-47 2E-51 335.7 24.9 318 5-325 1-322 (322)
4 2rh8_A Anthocyanidin reductase 100.0 9.7E-48 3.3E-52 343.1 19.8 321 4-326 8-337 (338)
5 3ruf_A WBGU; rossmann fold, UD 100.0 1.4E-47 4.6E-52 343.9 20.0 308 3-322 23-348 (351)
6 3ehe_A UDP-glucose 4-epimerase 100.0 1.1E-46 3.6E-51 332.8 22.9 294 5-324 1-304 (313)
7 4egb_A DTDP-glucose 4,6-dehydr 100.0 8.5E-47 2.9E-51 338.0 22.3 307 2-323 21-338 (346)
8 3ko8_A NAD-dependent epimerase 100.0 1.4E-46 4.8E-51 331.8 20.4 293 6-323 1-310 (312)
9 3enk_A UDP-glucose 4-epimerase 100.0 4.6E-46 1.6E-50 332.6 21.4 308 2-324 2-338 (341)
10 4id9_A Short-chain dehydrogena 100.0 3E-45 1E-49 328.1 18.7 292 4-323 18-341 (347)
11 2c20_A UDP-glucose 4-epimerase 100.0 1.8E-44 6.2E-49 320.8 21.9 298 5-323 1-325 (330)
12 1sb8_A WBPP; epimerase, 4-epim 100.0 3.4E-44 1.2E-48 321.8 22.5 307 4-322 26-350 (352)
13 3slg_A PBGP3 protein; structur 100.0 3.2E-45 1.1E-49 331.0 14.8 304 4-322 23-360 (372)
14 1oc2_A DTDP-glucose 4,6-dehydr 100.0 6.1E-44 2.1E-48 319.7 22.5 303 1-322 1-325 (348)
15 3sxp_A ADP-L-glycero-D-mannohe 100.0 2.9E-44 1E-48 323.5 20.2 301 3-323 8-325 (362)
16 2c5a_A GDP-mannose-3', 5'-epim 100.0 1.4E-43 4.8E-48 320.8 23.7 304 2-323 26-342 (379)
17 2pk3_A GDP-6-deoxy-D-LYXO-4-he 100.0 7.7E-44 2.6E-48 315.5 21.1 297 4-322 11-321 (321)
18 2yy7_A L-threonine dehydrogena 100.0 1.1E-44 3.9E-49 319.6 15.5 294 5-320 2-312 (312)
19 2x4g_A Nucleoside-diphosphate- 100.0 2.2E-43 7.7E-48 315.3 23.8 295 5-326 13-341 (342)
20 3gpi_A NAD-dependent epimerase 100.0 7.9E-44 2.7E-48 310.4 19.8 272 5-323 3-281 (286)
21 2hun_A 336AA long hypothetical 100.0 1.3E-43 4.4E-48 316.1 21.5 301 5-322 3-314 (336)
22 2q1s_A Putative nucleotide sug 100.0 1.9E-43 6.6E-48 319.8 22.8 301 5-322 32-357 (377)
23 1rkx_A CDP-glucose-4,6-dehydra 100.0 1.5E-43 5.2E-48 318.2 22.0 304 5-323 9-337 (357)
24 1r6d_A TDP-glucose-4,6-dehydra 100.0 1.4E-43 4.8E-48 316.0 21.3 299 6-322 1-314 (337)
25 1rpn_A GDP-mannose 4,6-dehydra 100.0 3.4E-43 1.1E-47 313.3 23.3 302 4-322 13-331 (335)
26 3vps_A TUNA, NAD-dependent epi 100.0 4.4E-44 1.5E-48 316.9 17.5 291 4-325 6-308 (321)
27 1ek6_A UDP-galactose 4-epimera 100.0 2.4E-43 8.1E-48 315.9 21.6 302 5-322 2-340 (348)
28 2p5y_A UDP-glucose 4-epimerase 100.0 7.8E-44 2.7E-48 314.1 18.0 295 6-322 1-310 (311)
29 1gy8_A UDP-galactose 4-epimera 100.0 2.3E-42 7.9E-47 314.9 23.8 307 5-322 2-378 (397)
30 4b8w_A GDP-L-fucose synthase; 100.0 2.8E-43 9.7E-48 311.2 17.2 293 3-323 4-315 (319)
31 2b69_A UDP-glucuronate decarbo 100.0 7.4E-42 2.5E-46 305.6 25.8 300 4-322 26-333 (343)
32 2bll_A Protein YFBG; decarboxy 100.0 1.4E-42 4.7E-47 310.5 20.8 306 6-324 1-339 (345)
33 1orr_A CDP-tyvelose-2-epimeras 100.0 1.1E-42 3.7E-47 311.4 19.3 304 5-325 1-342 (347)
34 1kew_A RMLB;, DTDP-D-glucose 4 100.0 1.1E-42 3.7E-47 313.1 17.0 301 6-322 1-337 (361)
35 2pzm_A Putative nucleotide sug 100.0 1.4E-41 4.7E-46 302.2 23.0 298 4-332 19-326 (330)
36 1i24_A Sulfolipid biosynthesis 100.0 9.6E-42 3.3E-46 311.5 21.7 313 4-323 10-378 (404)
37 3ius_A Uncharacterized conserv 100.0 4.5E-41 1.5E-45 293.0 24.9 265 4-318 4-283 (286)
38 1e6u_A GDP-fucose synthetase; 100.0 1.8E-42 6.3E-47 306.7 16.2 287 5-322 3-315 (321)
39 1t2a_A GDP-mannose 4,6 dehydra 100.0 1.4E-41 4.7E-46 307.5 21.9 306 5-323 24-367 (375)
40 3sc6_A DTDP-4-dehydrorhamnose 100.0 7.4E-43 2.5E-47 304.4 12.5 270 6-321 6-286 (287)
41 3ajr_A NDP-sugar epimerase; L- 100.0 6E-42 2.1E-46 302.8 18.3 294 7-325 1-311 (317)
42 1db3_A GDP-mannose 4,6-dehydra 100.0 2.7E-41 9.1E-46 305.3 22.4 316 5-333 1-363 (372)
43 1udb_A Epimerase, UDP-galactos 100.0 2.8E-41 9.5E-46 301.2 22.0 303 6-322 1-332 (338)
44 1eq2_A ADP-L-glycero-D-mannohe 100.0 6E-42 2.1E-46 301.8 16.7 290 7-322 1-309 (310)
45 2z1m_A GDP-D-mannose dehydrata 100.0 7.6E-41 2.6E-45 299.1 23.3 301 5-322 3-337 (345)
46 2q1w_A Putative nucleotide sug 100.0 7.3E-41 2.5E-45 297.9 22.6 296 4-330 20-326 (333)
47 2x6t_A ADP-L-glycero-D-manno-h 100.0 1E-41 3.4E-46 306.4 17.1 292 5-322 46-356 (357)
48 1y1p_A ARII, aldehyde reductas 100.0 1.2E-40 4.1E-45 297.5 23.1 311 4-320 10-341 (342)
49 2ydy_A Methionine adenosyltran 100.0 7.6E-41 2.6E-45 295.5 19.0 284 5-323 2-300 (315)
50 1n7h_A GDP-D-mannose-4,6-dehyd 100.0 1.1E-40 3.7E-45 302.3 20.2 303 6-322 29-354 (381)
51 1n2s_A DTDP-4-, DTDP-glucose o 100.0 2.4E-41 8.3E-46 296.5 11.6 277 6-324 1-298 (299)
52 2hrz_A AGR_C_4963P, nucleoside 100.0 9.6E-41 3.3E-45 298.2 15.4 298 4-320 13-337 (342)
53 1z45_A GAL10 bifunctional prot 100.0 1E-39 3.6E-44 317.4 23.6 308 4-324 10-353 (699)
54 2v6g_A Progesterone 5-beta-red 100.0 4.2E-39 1.5E-43 290.0 25.0 296 5-326 1-364 (364)
55 1z7e_A Protein aRNA; rossmann 100.0 1.1E-39 3.8E-44 314.9 19.7 309 4-325 314-655 (660)
56 1vl0_A DTDP-4-dehydrorhamnose 100.0 4.1E-40 1.4E-44 287.7 14.7 271 4-320 11-291 (292)
57 4b4o_A Epimerase family protei 100.0 1.9E-38 6.4E-43 278.0 20.2 273 6-318 1-294 (298)
58 3oh8_A Nucleoside-diphosphate 100.0 1.8E-36 6.1E-41 284.3 19.8 279 5-319 147-443 (516)
59 4f6c_A AUSA reductase domain p 100.0 2.3E-36 7.9E-41 277.7 19.5 303 4-322 68-413 (427)
60 3dhn_A NAD-dependent epimerase 100.0 2.4E-36 8.2E-41 254.2 15.3 224 1-261 1-226 (227)
61 4f6l_B AUSA reductase domain p 100.0 7.5E-36 2.6E-40 280.0 20.1 304 4-322 149-494 (508)
62 4dqv_A Probable peptide synthe 100.0 6.7E-35 2.3E-39 271.1 19.6 261 4-270 72-378 (478)
63 2ggs_A 273AA long hypothetical 100.0 2.8E-35 9.5E-40 254.6 11.5 263 6-312 1-272 (273)
64 3ay3_A NAD-dependent epimerase 100.0 1E-34 3.5E-39 250.2 13.9 236 5-317 2-238 (267)
65 2jl1_A Triphenylmethane reduct 100.0 3.6E-34 1.2E-38 249.4 16.8 256 6-317 1-286 (287)
66 2gn4_A FLAA1 protein, UDP-GLCN 100.0 6.7E-34 2.3E-38 253.7 16.4 234 5-272 21-262 (344)
67 3dqp_A Oxidoreductase YLBE; al 100.0 4E-34 1.4E-38 239.3 12.5 209 6-267 1-211 (219)
68 3e8x_A Putative NAD-dependent 100.0 1.1E-32 3.8E-37 233.2 19.7 214 4-268 20-235 (236)
69 2zcu_A Uncharacterized oxidore 100.0 1.1E-33 3.7E-38 246.2 13.4 255 7-320 1-286 (286)
70 3nzo_A UDP-N-acetylglucosamine 100.0 2.3E-32 8E-37 248.2 17.2 236 5-273 35-283 (399)
71 3rft_A Uronate dehydrogenase; 100.0 2.9E-32 1E-36 234.7 15.9 211 5-262 3-215 (267)
72 3st7_A Capsular polysaccharide 100.0 3.7E-32 1.3E-36 245.1 14.0 211 6-273 1-218 (369)
73 3h2s_A Putative NADH-flavin re 100.0 3.3E-31 1.1E-35 222.2 18.3 216 6-259 1-219 (224)
74 3i6i_A Putative leucoanthocyan 100.0 8.5E-32 2.9E-36 240.6 13.8 224 5-273 10-243 (346)
75 3ew7_A LMO0794 protein; Q8Y8U8 100.0 7E-31 2.4E-35 219.7 16.2 216 6-261 1-219 (221)
76 2a35_A Hypothetical protein PA 100.0 5.7E-32 1.9E-36 225.4 8.4 206 1-259 1-210 (215)
77 1xq6_A Unknown protein; struct 100.0 6.4E-31 2.2E-35 224.4 14.2 230 3-273 2-252 (253)
78 3e48_A Putative nucleoside-dip 100.0 7.7E-31 2.6E-35 228.6 14.7 214 6-273 1-217 (289)
79 2wm3_A NMRA-like family domain 100.0 7.6E-30 2.6E-34 223.4 15.6 225 5-273 5-235 (299)
80 1xgk_A Nitrogen metabolite rep 100.0 1.7E-29 5.8E-34 225.7 15.1 228 1-273 1-238 (352)
81 2bka_A CC3, TAT-interacting pr 100.0 2.5E-29 8.4E-34 213.3 13.8 207 5-255 18-227 (242)
82 1hdo_A Biliverdin IX beta redu 100.0 1.5E-28 5.1E-33 203.2 16.7 200 6-256 4-204 (206)
83 3m1a_A Putative dehydrogenase; 100.0 6.9E-29 2.3E-33 215.3 12.6 239 1-271 1-266 (281)
84 2bgk_A Rhizome secoisolaricire 100.0 2.4E-27 8E-32 205.3 17.7 235 4-270 15-276 (278)
85 1qyd_A Pinoresinol-lariciresin 100.0 9.8E-28 3.4E-32 211.3 15.0 235 1-273 1-242 (313)
86 3qvo_A NMRA family protein; st 99.9 1.8E-26 6.2E-31 194.9 15.5 200 3-255 21-223 (236)
87 1fmc_A 7 alpha-hydroxysteroid 99.9 1.3E-26 4.3E-31 198.2 14.4 223 4-260 10-254 (255)
88 2dkn_A 3-alpha-hydroxysteroid 99.9 7.6E-28 2.6E-32 205.7 6.3 229 5-260 1-250 (255)
89 2gas_A Isoflavone reductase; N 99.9 1.4E-26 4.9E-31 203.3 13.8 222 5-273 2-236 (307)
90 1qyc_A Phenylcoumaran benzylic 99.9 5.3E-27 1.8E-31 206.1 10.5 228 1-273 1-237 (308)
91 2yut_A Putative short-chain ox 99.9 2.7E-26 9.3E-31 189.9 12.9 194 6-251 1-205 (207)
92 2r6j_A Eugenol synthase 1; phe 99.9 2.5E-26 8.7E-31 202.7 13.4 218 5-273 11-236 (318)
93 3c1o_A Eugenol synthase; pheny 99.9 1.6E-26 5.4E-31 204.3 11.9 223 3-273 2-237 (321)
94 1w6u_A 2,4-dienoyl-COA reducta 99.9 3.2E-26 1.1E-30 200.6 12.9 239 4-272 25-286 (302)
95 1cyd_A Carbonyl reductase; sho 99.9 9.2E-26 3.2E-30 191.5 14.2 215 4-255 6-239 (244)
96 1spx_A Short-chain reductase f 99.9 2.1E-25 7.2E-30 193.0 16.4 241 1-270 1-276 (278)
97 3r6d_A NAD-dependent epimerase 99.9 1.8E-25 6.1E-30 186.9 15.1 193 3-246 3-199 (221)
98 3awd_A GOX2181, putative polyo 99.9 4.8E-25 1.7E-29 188.9 16.7 221 4-256 12-256 (260)
99 1xq1_A Putative tropinone redu 99.9 4.1E-25 1.4E-29 190.0 16.2 219 3-255 12-253 (266)
100 3d3w_A L-xylulose reductase; u 99.9 4.2E-25 1.4E-29 187.5 15.8 214 4-255 6-239 (244)
101 3tzq_B Short-chain type dehydr 99.9 3.5E-24 1.2E-28 184.5 21.3 216 4-256 10-249 (271)
102 4e6p_A Probable sorbitol dehyd 99.9 4E-25 1.4E-29 189.2 15.0 224 4-255 7-254 (259)
103 3un1_A Probable oxidoreductase 99.9 8.6E-25 2.9E-29 187.1 16.6 207 4-255 27-253 (260)
104 2cfc_A 2-(R)-hydroxypropyl-COM 99.9 1.7E-24 5.7E-29 184.4 17.8 218 5-255 2-245 (250)
105 3svt_A Short-chain type dehydr 99.9 1.4E-25 4.7E-30 194.4 11.0 239 4-273 10-274 (281)
106 2hq1_A Glucose/ribitol dehydro 99.9 1.6E-24 5.3E-29 184.3 17.2 221 1-256 1-244 (247)
107 3ai3_A NADPH-sorbose reductase 99.9 1.2E-24 4.2E-29 186.6 16.1 224 3-255 5-257 (263)
108 3afn_B Carbonyl reductase; alp 99.9 5E-25 1.7E-29 188.5 13.5 221 4-257 6-255 (258)
109 3d7l_A LIN1944 protein; APC893 99.9 2.6E-25 8.9E-30 183.2 11.3 188 5-253 3-201 (202)
110 1ja9_A 4HNR, 1,3,6,8-tetrahydr 99.9 7E-25 2.4E-29 189.3 14.0 220 3-256 19-272 (274)
111 3osu_A 3-oxoacyl-[acyl-carrier 99.9 2.7E-24 9.3E-29 182.6 16.9 218 4-256 3-243 (246)
112 3rd5_A Mypaa.01249.C; ssgcid, 99.9 5.3E-24 1.8E-28 185.4 19.1 224 4-252 15-249 (291)
113 2pnf_A 3-oxoacyl-[acyl-carrier 99.9 1E-24 3.5E-29 185.5 14.2 219 4-256 6-246 (248)
114 2pd6_A Estradiol 17-beta-dehyd 99.9 1.4E-24 4.6E-29 186.5 15.1 226 4-261 6-260 (264)
115 1nff_A Putative oxidoreductase 99.9 5.9E-24 2E-28 182.0 18.6 210 4-256 6-237 (260)
116 3qiv_A Short-chain dehydrogena 99.9 1.1E-24 3.8E-29 185.9 14.0 218 1-255 5-247 (253)
117 3pk0_A Short-chain dehydrogena 99.9 4E-24 1.4E-28 183.3 17.2 219 4-255 9-249 (262)
118 2o23_A HADH2 protein; HSD17B10 99.9 1.2E-23 4E-28 180.7 19.9 218 1-255 8-257 (265)
119 3v2h_A D-beta-hydroxybutyrate 99.9 4.9E-24 1.7E-28 184.5 17.4 227 4-255 24-276 (281)
120 3tpc_A Short chain alcohol deh 99.9 7.1E-24 2.4E-28 181.2 18.2 216 4-255 6-250 (257)
121 2ae2_A Protein (tropinone redu 99.9 2.5E-24 8.6E-29 184.4 15.3 220 4-255 8-252 (260)
122 2wsb_A Galactitol dehydrogenas 99.9 2.9E-24 1E-28 183.4 15.6 218 4-256 10-250 (254)
123 3f9i_A 3-oxoacyl-[acyl-carrier 99.9 1.2E-23 4.2E-28 179.0 18.8 215 4-256 13-245 (249)
124 1uay_A Type II 3-hydroxyacyl-C 99.9 2.9E-24 1E-28 182.0 14.8 206 5-255 2-235 (242)
125 3op4_A 3-oxoacyl-[acyl-carrier 99.9 9.9E-24 3.4E-28 179.3 17.6 215 4-256 8-244 (248)
126 1zk4_A R-specific alcohol dehy 99.9 6.3E-24 2.1E-28 181.0 16.4 217 4-255 5-246 (251)
127 3lyl_A 3-oxoacyl-(acyl-carrier 99.9 9.6E-24 3.3E-28 179.4 17.3 220 1-255 1-242 (247)
128 2ph3_A 3-oxoacyl-[acyl carrier 99.9 1.7E-24 5.8E-29 183.8 12.5 217 5-256 1-241 (245)
129 3gaf_A 7-alpha-hydroxysteroid 99.9 4.9E-24 1.7E-28 182.1 15.1 218 4-255 11-249 (256)
130 3i4f_A 3-oxoacyl-[acyl-carrier 99.9 5.4E-24 1.8E-28 182.8 15.4 220 3-255 5-249 (264)
131 1sby_A Alcohol dehydrogenase; 99.9 1.3E-23 4.3E-28 179.4 17.4 219 1-255 1-238 (254)
132 2zat_A Dehydrogenase/reductase 99.9 3.1E-24 1.1E-28 183.8 13.4 220 5-259 14-259 (260)
133 3ak4_A NADH-dependent quinucli 99.9 8E-24 2.7E-28 181.6 15.9 218 5-255 12-258 (263)
134 2z1n_A Dehydrogenase; reductas 99.9 9.6E-24 3.3E-28 180.7 15.9 224 3-255 5-256 (260)
135 1h5q_A NADP-dependent mannitol 99.9 6.2E-24 2.1E-28 182.5 14.7 227 3-256 12-261 (265)
136 3pgx_A Carveol dehydrogenase; 99.9 1.4E-23 4.9E-28 181.7 17.1 227 4-256 14-276 (280)
137 4dqx_A Probable oxidoreductase 99.9 5.1E-24 1.8E-28 183.9 14.2 219 2-255 24-267 (277)
138 3n74_A 3-ketoacyl-(acyl-carrie 99.9 9.7E-24 3.3E-28 180.9 15.7 222 1-255 5-252 (261)
139 3rih_A Short chain dehydrogena 99.9 1.9E-23 6.4E-28 181.6 17.4 219 4-255 40-280 (293)
140 2bd0_A Sepiapterin reductase; 99.9 1.9E-23 6.6E-28 177.2 17.1 198 5-246 2-225 (244)
141 2fwm_X 2,3-dihydro-2,3-dihydro 99.9 1.6E-23 5.4E-28 178.3 16.5 218 1-255 3-244 (250)
142 3imf_A Short chain dehydrogena 99.9 2.6E-23 8.8E-28 177.7 17.8 220 4-255 5-248 (257)
143 3s55_A Putative short-chain de 99.9 3E-23 1E-27 179.7 18.4 224 4-255 9-274 (281)
144 2ew8_A (S)-1-phenylethanol deh 99.9 3.1E-23 1.1E-27 176.4 18.0 216 4-255 6-244 (249)
145 2c07_A 3-oxoacyl-(acyl-carrier 99.9 2.2E-23 7.7E-28 180.9 17.3 218 4-256 43-282 (285)
146 1ae1_A Tropinone reductase-I; 99.9 3.5E-23 1.2E-27 178.5 18.3 218 4-255 20-265 (273)
147 1qsg_A Enoyl-[acyl-carrier-pro 99.9 1.7E-23 5.7E-28 179.7 16.1 218 5-255 9-252 (265)
148 1edo_A Beta-keto acyl carrier 99.9 7E-24 2.4E-28 179.9 13.4 217 5-256 1-241 (244)
149 3sx2_A Putative 3-ketoacyl-(ac 99.9 1.6E-23 5.5E-28 181.2 15.9 234 4-255 12-273 (278)
150 2wyu_A Enoyl-[acyl carrier pro 99.9 1.4E-23 4.9E-28 179.8 15.3 219 4-255 7-250 (261)
151 3uf0_A Short-chain dehydrogena 99.9 1.5E-23 5.2E-28 180.5 15.6 217 4-255 30-268 (273)
152 2q2v_A Beta-D-hydroxybutyrate 99.9 4E-23 1.4E-27 176.4 18.1 219 4-255 3-250 (255)
153 3grp_A 3-oxoacyl-(acyl carrier 99.9 1.3E-23 4.5E-28 180.2 15.0 215 4-256 26-262 (266)
154 2ehd_A Oxidoreductase, oxidore 99.9 1.6E-23 5.3E-28 176.6 15.2 196 1-246 1-215 (234)
155 3p19_A BFPVVD8, putative blue 99.9 9.3E-24 3.2E-28 181.2 14.0 205 4-247 15-238 (266)
156 2d1y_A Hypothetical protein TT 99.9 1.6E-23 5.5E-28 178.9 15.4 218 1-255 1-243 (256)
157 1mxh_A Pteridine reductase 2; 99.9 8.1E-23 2.8E-27 176.6 20.0 218 5-256 11-270 (276)
158 4eso_A Putative oxidoreductase 99.9 2.7E-23 9.4E-28 177.3 16.7 219 5-255 8-245 (255)
159 3o38_A Short chain dehydrogena 99.9 4.2E-23 1.4E-27 177.4 17.9 220 4-255 21-263 (266)
160 2rhc_B Actinorhodin polyketide 99.9 4.7E-24 1.6E-28 184.3 12.0 222 4-256 21-273 (277)
161 1gee_A Glucose 1-dehydrogenase 99.9 2.2E-23 7.7E-28 178.6 15.8 220 4-255 6-248 (261)
162 1yo6_A Putative carbonyl reduc 99.9 2.6E-23 8.8E-28 176.9 15.8 204 5-253 3-242 (250)
163 3oid_A Enoyl-[acyl-carrier-pro 99.9 2.3E-23 7.8E-28 178.1 15.5 218 4-255 3-244 (258)
164 1hdc_A 3-alpha, 20 beta-hydrox 99.9 2.6E-23 8.7E-28 177.4 15.7 214 4-255 4-240 (254)
165 3u9l_A 3-oxoacyl-[acyl-carrier 99.9 2.1E-23 7.1E-28 183.9 15.3 240 1-264 1-276 (324)
166 2p91_A Enoyl-[acyl-carrier-pro 99.9 4.7E-23 1.6E-27 178.8 17.3 219 4-255 20-264 (285)
167 3ctm_A Carbonyl reductase; alc 99.9 3.2E-23 1.1E-27 179.4 15.7 220 3-256 32-275 (279)
168 3dii_A Short-chain dehydrogena 99.9 4.6E-23 1.6E-27 175.1 16.3 209 5-255 2-227 (247)
169 2b4q_A Rhamnolipids biosynthes 99.9 8E-23 2.7E-27 176.4 17.8 218 4-255 28-272 (276)
170 3v8b_A Putative dehydrogenase, 99.9 1.8E-22 6.2E-27 174.7 20.0 228 4-255 27-277 (283)
171 3gem_A Short chain dehydrogena 99.9 1.5E-22 5.1E-27 173.1 19.1 212 2-255 24-253 (260)
172 3tox_A Short chain dehydrogena 99.9 3.4E-23 1.2E-27 179.0 15.3 219 4-255 7-251 (280)
173 1x1t_A D(-)-3-hydroxybutyrate 99.9 4.8E-23 1.6E-27 176.4 16.0 228 4-255 3-255 (260)
174 3ijr_A Oxidoreductase, short c 99.9 4.8E-23 1.7E-27 179.1 16.3 219 4-255 46-285 (291)
175 4e3z_A Putative oxidoreductase 99.9 3.8E-23 1.3E-27 178.2 15.4 219 5-255 26-270 (272)
176 2uvd_A 3-oxoacyl-(acyl-carrier 99.9 8.5E-23 2.9E-27 173.4 17.1 217 4-255 3-242 (246)
177 4dmm_A 3-oxoacyl-[acyl-carrier 99.9 3E-23 1E-27 178.4 14.3 214 4-255 27-264 (269)
178 1yxm_A Pecra, peroxisomal tran 99.9 7E-23 2.4E-27 179.4 16.6 222 5-256 18-264 (303)
179 1wma_A Carbonyl reductase [NAD 99.9 3.8E-23 1.3E-27 178.5 14.7 215 3-245 2-257 (276)
180 3cxt_A Dehydrogenase with diff 99.9 4.2E-23 1.4E-27 179.4 14.8 221 4-255 33-279 (291)
181 4iin_A 3-ketoacyl-acyl carrier 99.9 7.2E-23 2.5E-27 176.3 16.1 220 1-255 25-267 (271)
182 3r3s_A Oxidoreductase; structu 99.9 4.1E-23 1.4E-27 179.8 14.6 219 4-255 48-289 (294)
183 1iy8_A Levodione reductase; ox 99.9 5.1E-23 1.7E-27 176.9 15.0 223 4-255 12-261 (267)
184 3t4x_A Oxidoreductase, short c 99.9 1.1E-22 3.8E-27 174.8 16.9 223 4-255 9-260 (267)
185 3gvc_A Oxidoreductase, probabl 99.9 1.3E-22 4.5E-27 175.0 17.3 215 5-255 29-270 (277)
186 3ioy_A Short-chain dehydrogena 99.9 6.5E-23 2.2E-27 180.5 15.6 218 4-245 7-252 (319)
187 3oig_A Enoyl-[acyl-carrier-pro 99.9 2.7E-22 9.2E-27 172.4 19.1 222 3-255 5-251 (266)
188 2ag5_A DHRS6, dehydrogenase/re 99.9 5.4E-23 1.9E-27 174.6 14.4 220 1-255 1-241 (246)
189 4egf_A L-xylulose reductase; s 99.9 3E-23 1E-27 178.2 13.0 220 4-255 19-261 (266)
190 3sju_A Keto reductase; short-c 99.9 9.3E-23 3.2E-27 176.3 16.0 221 5-256 24-275 (279)
191 3rwb_A TPLDH, pyridoxal 4-dehy 99.9 7.5E-23 2.6E-27 173.8 15.0 216 4-255 5-242 (247)
192 3ftp_A 3-oxoacyl-[acyl-carrier 99.9 3.7E-23 1.3E-27 177.9 13.2 217 4-255 27-265 (270)
193 3r1i_A Short-chain type dehydr 99.9 1.7E-22 5.7E-27 174.3 17.3 220 4-256 31-272 (276)
194 3ucx_A Short chain dehydrogena 99.9 1.4E-22 4.6E-27 173.9 16.6 222 5-256 11-260 (264)
195 3pxx_A Carveol dehydrogenase; 99.9 1.1E-22 3.9E-27 176.6 16.3 238 4-255 9-281 (287)
196 3e9n_A Putative short-chain de 99.9 3.4E-23 1.2E-27 175.8 12.6 209 1-253 1-225 (245)
197 1xhl_A Short-chain dehydrogena 99.9 3.7E-23 1.3E-27 180.3 13.1 239 4-269 25-293 (297)
198 1uls_A Putative 3-oxoacyl-acyl 99.9 2.6E-22 8.9E-27 170.2 18.0 214 1-255 1-236 (245)
199 1xg5_A ARPG836; short chain de 99.9 4.3E-23 1.5E-27 178.6 13.3 211 5-246 32-265 (279)
200 2dtx_A Glucose 1-dehydrogenase 99.9 5.2E-23 1.8E-27 176.4 13.6 209 5-255 8-244 (264)
201 3edm_A Short chain dehydrogena 99.9 2.7E-22 9.3E-27 171.5 17.9 222 4-257 7-248 (259)
202 2gdz_A NAD+-dependent 15-hydro 99.9 3.2E-23 1.1E-27 178.2 12.1 231 5-262 7-257 (267)
203 1yb1_A 17-beta-hydroxysteroid 99.9 4.1E-23 1.4E-27 178.0 12.8 198 4-246 30-249 (272)
204 3tl3_A Short-chain type dehydr 99.9 1.1E-22 3.6E-27 173.9 15.3 216 1-255 5-250 (257)
205 1vl8_A Gluconate 5-dehydrogena 99.9 4.5E-22 1.5E-26 170.9 19.0 219 4-255 20-262 (267)
206 2ekp_A 2-deoxy-D-gluconate 3-d 99.9 3.7E-22 1.3E-26 168.7 18.2 210 5-255 2-234 (239)
207 3tjr_A Short chain dehydrogena 99.9 5.5E-23 1.9E-27 179.6 13.4 213 5-246 31-267 (301)
208 4ibo_A Gluconate dehydrogenase 99.9 2.5E-23 8.6E-28 179.0 11.0 218 4-255 25-265 (271)
209 4da9_A Short-chain dehydrogena 99.9 2.5E-22 8.5E-27 173.7 17.1 218 5-255 29-273 (280)
210 1sny_A Sniffer CG10964-PA; alp 99.9 3E-22 1E-26 172.1 17.5 207 4-257 20-264 (267)
211 1xkq_A Short-chain reductase f 99.9 2.1E-22 7.3E-27 174.2 16.5 229 1-256 1-261 (280)
212 3uxy_A Short-chain dehydrogena 99.9 9.7E-23 3.3E-27 174.8 14.1 210 4-255 27-261 (266)
213 3vtz_A Glucose 1-dehydrogenase 99.9 1E-22 3.6E-27 175.0 14.3 212 4-256 13-252 (269)
214 3h7a_A Short chain dehydrogena 99.9 1.7E-22 5.9E-27 172.0 15.5 209 3-247 5-232 (252)
215 3a28_C L-2.3-butanediol dehydr 99.9 3.5E-22 1.2E-26 170.8 17.1 220 5-255 2-253 (258)
216 3u5t_A 3-oxoacyl-[acyl-carrier 99.9 2.4E-22 8.1E-27 172.5 16.0 221 3-256 25-265 (267)
217 2pd4_A Enoyl-[acyl-carrier-pro 99.9 2.4E-22 8.2E-27 173.5 16.1 222 1-255 1-248 (275)
218 2nm0_A Probable 3-oxacyl-(acyl 99.9 3.5E-22 1.2E-26 170.1 16.9 206 4-255 20-247 (253)
219 1geg_A Acetoin reductase; SDR 99.9 1.7E-22 5.7E-27 172.6 15.0 221 5-255 2-251 (256)
220 3l6e_A Oxidoreductase, short-c 99.9 2.4E-22 8.3E-27 169.3 15.6 197 5-247 3-216 (235)
221 3qlj_A Short chain dehydrogena 99.9 9.5E-23 3.3E-27 179.9 13.7 231 5-273 27-312 (322)
222 3rkr_A Short chain oxidoreduct 99.9 2.2E-22 7.4E-27 172.5 15.5 201 4-247 28-248 (262)
223 3k31_A Enoyl-(acyl-carrier-pro 99.9 2.9E-22 9.8E-27 174.7 16.5 219 4-255 29-272 (296)
224 3lf2_A Short chain oxidoreduct 99.9 8.8E-23 3E-27 175.2 13.1 222 4-255 7-259 (265)
225 4e4y_A Short chain dehydrogena 99.9 1.5E-22 5E-27 171.7 14.2 213 3-255 2-239 (244)
226 3gk3_A Acetoacetyl-COA reducta 99.9 3.2E-22 1.1E-26 172.1 16.5 217 5-255 25-264 (269)
227 1hxh_A 3BETA/17BETA-hydroxyste 99.9 8.2E-23 2.8E-27 174.2 12.5 219 4-256 5-247 (253)
228 1o5i_A 3-oxoacyl-(acyl carrier 99.9 4.2E-22 1.4E-26 169.3 16.9 208 4-256 18-243 (249)
229 3ezl_A Acetoacetyl-COA reducta 99.9 2.3E-22 7.9E-27 171.8 15.2 216 4-255 12-251 (256)
230 1uzm_A 3-oxoacyl-[acyl-carrier 99.9 2.9E-22 1E-26 170.1 15.8 206 4-255 14-241 (247)
231 3tsc_A Putative oxidoreductase 99.9 3.6E-22 1.2E-26 172.5 16.4 231 4-256 10-273 (277)
232 3ek2_A Enoyl-(acyl-carrier-pro 99.9 6.7E-23 2.3E-27 176.6 11.6 227 4-263 13-266 (271)
233 3grk_A Enoyl-(acyl-carrier-pro 99.9 3.5E-22 1.2E-26 173.8 16.1 217 5-255 31-273 (293)
234 4dyv_A Short-chain dehydrogena 99.9 1.9E-22 6.7E-27 173.5 14.0 206 5-248 28-254 (272)
235 3uce_A Dehydrogenase; rossmann 99.9 1.5E-22 5.2E-27 169.2 12.9 203 3-255 4-218 (223)
236 3nrc_A Enoyl-[acyl-carrier-pro 99.9 7.6E-22 2.6E-26 170.7 17.6 218 4-255 25-269 (280)
237 1fjh_A 3alpha-hydroxysteroid d 99.9 1.6E-22 5.6E-27 172.8 13.2 225 5-255 1-246 (257)
238 4iiu_A 3-oxoacyl-[acyl-carrier 99.9 5.2E-22 1.8E-26 170.6 16.4 216 4-256 25-265 (267)
239 1g0o_A Trihydroxynaphthalene r 99.9 1.5E-21 5.1E-26 169.2 19.3 220 4-255 28-279 (283)
240 3v2g_A 3-oxoacyl-[acyl-carrier 99.9 1.8E-21 6E-26 167.5 19.6 218 4-255 30-267 (271)
241 1yde_A Retinal dehydrogenase/r 99.9 4.2E-22 1.4E-26 171.4 15.5 224 5-264 9-257 (270)
242 3nyw_A Putative oxidoreductase 99.9 4E-22 1.4E-26 169.5 15.2 202 4-246 6-226 (250)
243 3guy_A Short-chain dehydrogena 99.9 1.6E-22 5.6E-27 169.9 12.6 197 5-246 1-211 (230)
244 3rku_A Oxidoreductase YMR226C; 99.9 3.6E-22 1.2E-26 173.1 15.1 217 5-254 33-275 (287)
245 4fc7_A Peroxisomal 2,4-dienoyl 99.9 9.3E-23 3.2E-27 176.1 11.3 219 4-255 26-268 (277)
246 4imr_A 3-oxoacyl-(acyl-carrier 99.9 1.8E-22 6.3E-27 174.0 12.8 221 4-255 32-273 (275)
247 3tfo_A Putative 3-oxoacyl-(acy 99.9 5.3E-22 1.8E-26 169.8 15.4 208 4-247 3-227 (264)
248 3ppi_A 3-hydroxyacyl-COA dehyd 99.9 6.6E-22 2.3E-26 171.3 16.0 215 5-255 30-274 (281)
249 3ksu_A 3-oxoacyl-acyl carrier 99.9 1.8E-22 6E-27 172.9 12.2 222 4-256 10-250 (262)
250 3kzv_A Uncharacterized oxidore 99.9 4.2E-22 1.4E-26 169.9 14.3 213 5-255 2-246 (254)
251 3asu_A Short-chain dehydrogena 99.9 7.5E-22 2.6E-26 167.6 15.7 202 6-245 1-223 (248)
252 2jah_A Clavulanic acid dehydro 99.9 1E-21 3.5E-26 166.8 16.2 210 4-246 6-232 (247)
253 3orf_A Dihydropteridine reduct 99.9 2.4E-22 8.3E-27 171.0 12.2 196 4-253 21-239 (251)
254 3l77_A Short-chain alcohol deh 99.9 1.3E-21 4.4E-26 165.0 16.3 201 5-247 2-218 (235)
255 2a4k_A 3-oxoacyl-[acyl carrier 99.9 4E-22 1.4E-26 170.8 13.2 217 1-255 1-237 (263)
256 3oec_A Carveol dehydrogenase ( 99.9 2.3E-21 7.7E-26 170.6 18.0 228 4-255 45-311 (317)
257 3zv4_A CIS-2,3-dihydrobiphenyl 99.9 1.1E-21 3.9E-26 169.7 15.0 222 1-255 1-253 (281)
258 3uve_A Carveol dehydrogenase ( 99.9 5E-21 1.7E-25 166.2 19.0 226 4-255 10-281 (286)
259 3sc4_A Short chain dehydrogena 99.9 5.1E-21 1.7E-25 165.9 18.8 205 1-246 5-236 (285)
260 1ooe_A Dihydropteridine reduct 99.9 6.6E-22 2.3E-26 166.8 12.6 187 5-243 3-210 (236)
261 3f1l_A Uncharacterized oxidore 99.9 1.6E-21 5.6E-26 166.0 15.1 209 5-255 12-244 (252)
262 4dry_A 3-oxoacyl-[acyl-carrier 99.9 7.8E-22 2.7E-26 170.6 13.2 214 4-251 32-266 (281)
263 2qhx_A Pteridine reductase 1; 99.9 3.8E-21 1.3E-25 169.8 17.7 217 4-255 45-321 (328)
264 1zmt_A Haloalcohol dehalogenas 99.9 2.3E-21 8E-26 165.3 15.8 215 5-256 1-242 (254)
265 3t7c_A Carveol dehydrogenase; 99.9 6.1E-21 2.1E-25 166.5 18.7 226 4-255 27-294 (299)
266 3is3_A 17BETA-hydroxysteroid d 99.9 3.7E-21 1.3E-25 165.5 17.0 223 4-255 17-267 (270)
267 2x9g_A PTR1, pteridine reducta 99.9 6.5E-21 2.2E-25 165.6 18.2 217 4-255 22-281 (288)
268 3icc_A Putative 3-oxoacyl-(acy 99.9 4E-21 1.4E-25 164.0 16.4 219 4-255 6-251 (255)
269 1zem_A Xylitol dehydrogenase; 99.9 1.7E-21 6E-26 166.8 14.1 211 4-245 6-248 (262)
270 2nwq_A Probable short-chain de 99.9 3.7E-21 1.3E-25 165.5 16.0 204 6-245 22-246 (272)
271 1dhr_A Dihydropteridine reduct 99.9 1.1E-21 3.8E-26 166.0 12.2 198 4-253 6-227 (241)
272 1xu9_A Corticosteroid 11-beta- 99.9 7.2E-22 2.5E-26 171.5 10.1 201 4-246 27-247 (286)
273 3gdg_A Probable NADP-dependent 99.9 9.1E-21 3.1E-25 162.9 15.6 219 4-255 19-262 (267)
274 3ged_A Short-chain dehydrogena 99.9 1.5E-20 5.1E-25 157.9 16.5 208 4-253 1-225 (247)
275 4fn4_A Short chain dehydrogena 99.9 1.8E-20 6.2E-25 158.0 16.7 215 1-246 3-237 (254)
276 3e03_A Short chain dehydrogena 99.9 1.9E-20 6.7E-25 161.3 16.9 205 1-246 2-232 (274)
277 2qq5_A DHRS1, dehydrogenase/re 99.9 1.8E-20 6.1E-25 160.4 16.3 212 4-246 4-242 (260)
278 1e7w_A Pteridine reductase; di 99.9 4.1E-20 1.4E-24 160.7 18.8 217 4-255 8-284 (291)
279 3i1j_A Oxidoreductase, short c 99.8 1.5E-20 5.2E-25 159.6 14.3 200 4-245 13-235 (247)
280 3kvo_A Hydroxysteroid dehydrog 99.8 7.1E-20 2.4E-24 162.5 18.8 208 5-253 45-279 (346)
281 3o26_A Salutaridine reductase; 99.8 9.1E-20 3.1E-24 160.0 18.0 215 5-246 12-295 (311)
282 4b79_A PA4098, probable short- 99.8 6.4E-20 2.2E-24 153.0 15.5 214 4-255 10-237 (242)
283 4gkb_A 3-oxoacyl-[acyl-carrier 99.8 2.3E-19 8E-24 152.0 18.3 223 3-255 5-248 (258)
284 4g81_D Putative hexonate dehyd 99.8 3.3E-20 1.1E-24 156.5 11.8 219 4-255 8-249 (255)
285 1y7t_A Malate dehydrogenase; N 99.8 3.1E-21 1.1E-25 170.3 5.2 174 5-199 4-189 (327)
286 2fr1_A Erythromycin synthase, 99.8 6E-20 2E-24 170.0 12.4 221 4-269 225-461 (486)
287 4fgs_A Probable dehydrogenase 99.8 4.7E-19 1.6E-23 150.8 16.8 219 4-255 28-268 (273)
288 1zmo_A Halohydrin dehalogenase 99.8 1E-19 3.4E-24 154.2 12.4 210 5-255 1-240 (244)
289 4hp8_A 2-deoxy-D-gluconate 3-d 99.8 1.1E-18 3.8E-23 145.8 18.4 209 4-246 8-230 (247)
290 4fs3_A Enoyl-[acyl-carrier-pro 99.8 1E-18 3.5E-23 148.8 18.0 213 2-245 3-237 (256)
291 1jtv_A 17 beta-hydroxysteroid 99.8 7.2E-20 2.5E-24 161.6 11.0 220 5-252 2-254 (327)
292 1gz6_A Estradiol 17 beta-dehyd 99.8 4.4E-19 1.5E-23 155.8 14.8 265 4-324 8-304 (319)
293 2z5l_A Tylkr1, tylactone synth 99.8 1.4E-19 4.9E-24 168.1 12.1 223 4-271 258-493 (511)
294 3u0b_A Oxidoreductase, short c 99.8 8E-19 2.7E-23 161.0 16.3 214 4-255 212-448 (454)
295 1oaa_A Sepiapterin reductase; 99.8 2.2E-19 7.4E-24 153.6 11.6 210 4-244 5-246 (259)
296 2h7i_A Enoyl-[acyl-carrier-pro 99.8 7E-19 2.4E-23 151.2 12.2 219 4-255 6-262 (269)
297 4h15_A Short chain alcohol deh 99.8 2.2E-18 7.5E-23 146.4 14.5 213 4-256 10-256 (261)
298 1d7o_A Enoyl-[acyl-carrier pro 99.8 2.5E-18 8.6E-23 149.9 13.4 225 2-256 5-284 (297)
299 3mje_A AMPHB; rossmann fold, o 99.7 7.4E-18 2.5E-22 155.5 12.6 202 5-246 239-457 (496)
300 2ptg_A Enoyl-acyl carrier redu 99.7 9.2E-17 3.2E-21 141.4 13.7 228 4-255 8-303 (319)
301 3oml_A GH14720P, peroxisomal m 99.7 1.7E-16 5.9E-21 151.1 14.7 195 3-245 17-239 (613)
302 2o2s_A Enoyl-acyl carrier redu 99.7 4.7E-16 1.6E-20 136.6 14.7 224 4-255 8-290 (315)
303 3qp9_A Type I polyketide synth 99.7 3E-16 1E-20 146.4 10.7 223 4-270 250-503 (525)
304 3lt0_A Enoyl-ACP reductase; tr 99.6 7.8E-16 2.7E-20 136.0 11.0 170 5-196 2-223 (329)
305 2pff_A Fatty acid synthase sub 99.5 8.4E-15 2.9E-19 146.0 9.5 207 3-245 474-713 (1688)
306 2uv8_A Fatty acid synthase sub 99.5 7E-14 2.4E-18 143.7 16.1 207 3-245 673-912 (1887)
307 3zu3_A Putative reductase YPO4 99.5 4.1E-13 1.4E-17 118.9 14.1 170 4-196 46-283 (405)
308 2uv9_A Fatty acid synthase alp 99.5 2.7E-13 9.2E-18 139.1 14.4 208 2-245 649-887 (1878)
309 2et6_A (3R)-hydroxyacyl-COA de 99.4 4E-13 1.4E-17 127.4 12.2 218 4-270 7-274 (604)
310 2et6_A (3R)-hydroxyacyl-COA de 99.4 4.4E-13 1.5E-17 127.2 12.3 194 4-244 321-531 (604)
311 3slk_A Polyketide synthase ext 99.4 1.4E-13 4.7E-18 134.5 8.8 202 4-246 529-748 (795)
312 4eue_A Putative reductase CA_C 99.4 1.3E-12 4.4E-17 117.6 13.4 171 4-196 59-297 (418)
313 3s8m_A Enoyl-ACP reductase; ro 99.4 6.1E-13 2.1E-17 118.8 10.4 171 4-197 60-298 (422)
314 1b8p_A Protein (malate dehydro 99.4 5.1E-13 1.7E-17 117.5 6.5 177 1-197 1-190 (329)
315 3ic5_A Putative saccharopine d 99.4 2.1E-12 7.2E-17 96.0 8.1 96 2-124 2-98 (118)
316 2vz8_A Fatty acid synthase; tr 99.2 5.9E-11 2E-15 128.1 11.4 169 4-195 1883-2065(2512)
317 1smk_A Malate dehydrogenase, g 99.2 1.1E-10 3.9E-15 102.2 10.8 117 4-128 7-125 (326)
318 3zen_D Fatty acid synthase; tr 99.1 1.6E-09 5.5E-14 117.2 17.5 229 4-269 2135-2414(3089)
319 1o6z_A MDH, malate dehydrogena 99.0 7.8E-10 2.7E-14 95.9 8.9 168 6-196 1-174 (303)
320 1hye_A L-lactate/malate dehydr 99.0 2.6E-09 8.8E-14 93.1 12.0 167 6-196 1-177 (313)
321 1lu9_A Methylene tetrahydromet 98.8 1.9E-09 6.6E-14 93.0 4.2 81 4-87 118-198 (287)
322 2hmt_A YUAA protein; RCK, KTN, 98.8 4.8E-09 1.6E-13 80.4 6.0 103 4-131 5-108 (144)
323 3llv_A Exopolyphosphatase-rela 98.8 8.3E-09 2.8E-13 79.0 6.0 77 1-86 1-79 (141)
324 3abi_A Putative uncharacterize 98.7 2.1E-08 7E-13 89.5 7.8 95 3-127 14-108 (365)
325 1lss_A TRK system potassium up 98.7 8.1E-08 2.8E-12 73.1 10.0 75 4-86 3-78 (140)
326 1mld_A Malate dehydrogenase; o 98.7 2.5E-07 8.5E-12 80.5 14.1 117 6-129 1-119 (314)
327 4ina_A Saccharopine dehydrogen 98.7 2.7E-08 9.4E-13 89.8 6.8 101 5-126 1-106 (405)
328 5mdh_A Malate dehydrogenase; o 98.6 4.8E-08 1.6E-12 85.4 7.2 118 5-129 3-131 (333)
329 1ff9_A Saccharopine reductase; 98.6 2.9E-08 1E-12 90.7 5.4 105 5-118 3-116 (450)
330 1id1_A Putative potassium chan 98.5 2.1E-07 7.3E-12 72.1 7.7 76 5-86 3-80 (153)
331 4ggo_A Trans-2-enoyl-COA reduc 98.5 5.1E-07 1.8E-11 79.3 10.5 82 5-88 50-151 (401)
332 3pqe_A L-LDH, L-lactate dehydr 98.5 1.4E-06 4.6E-11 75.9 12.1 119 1-128 1-123 (326)
333 2axq_A Saccharopine dehydrogen 98.4 1.4E-07 4.8E-12 86.4 5.2 76 4-87 22-98 (467)
334 2g1u_A Hypothetical protein TM 98.4 1E-06 3.5E-11 68.4 9.3 75 4-86 18-93 (155)
335 2gk4_A Conserved hypothetical 98.4 2.7E-07 9.2E-12 75.7 5.2 75 4-89 2-96 (232)
336 3fi9_A Malate dehydrogenase; s 98.4 6.4E-07 2.2E-11 78.5 7.3 117 4-128 7-127 (343)
337 3c85_A Putative glutathione-re 98.3 1.8E-06 6E-11 69.0 8.6 73 5-86 39-114 (183)
338 3l4b_C TRKA K+ channel protien 98.3 6.7E-07 2.3E-11 73.6 6.2 73 6-86 1-74 (218)
339 3fwz_A Inner membrane protein 98.3 9E-07 3.1E-11 67.4 6.1 73 5-86 7-80 (140)
340 1dih_A Dihydrodipicolinate red 98.2 6.1E-07 2.1E-11 76.3 3.1 80 1-86 1-81 (273)
341 3vku_A L-LDH, L-lactate dehydr 98.2 7.9E-06 2.7E-10 71.0 10.0 116 4-128 8-126 (326)
342 1y6j_A L-lactate dehydrogenase 98.2 1.4E-05 4.8E-10 69.5 11.5 116 4-128 6-124 (318)
343 1u7z_A Coenzyme A biosynthesis 98.2 1.7E-06 5.8E-11 70.8 4.8 73 4-89 7-99 (226)
344 1ur5_A Malate dehydrogenase; o 98.1 1.7E-05 5.7E-10 68.8 11.1 115 5-127 2-119 (309)
345 3tl2_A Malate dehydrogenase; c 98.1 8.8E-06 3E-10 70.5 9.2 118 1-128 4-128 (315)
346 3hhp_A Malate dehydrogenase; M 98.1 3.7E-05 1.3E-09 66.5 12.8 172 6-197 1-177 (312)
347 2z2v_A Hypothetical protein PH 98.1 6.1E-06 2.1E-10 73.2 7.5 71 5-86 16-86 (365)
348 1pzg_A LDH, lactate dehydrogen 98.1 1.8E-05 6.1E-10 69.3 10.1 119 4-128 8-133 (331)
349 1oju_A MDH, malate dehydrogena 98.1 4.9E-05 1.7E-09 65.1 12.3 112 6-128 1-119 (294)
350 3gvi_A Malate dehydrogenase; N 98.0 6.7E-05 2.3E-09 65.2 12.9 115 4-128 6-125 (324)
351 3p7m_A Malate dehydrogenase; p 98.0 3.2E-05 1.1E-09 67.2 9.6 116 5-128 5-123 (321)
352 1jay_A Coenzyme F420H2:NADP+ o 98.0 4.3E-06 1.5E-10 68.4 3.8 73 6-86 1-73 (212)
353 4aj2_A L-lactate dehydrogenase 97.9 0.00013 4.5E-09 63.4 13.0 117 4-128 18-137 (331)
354 1pqw_A Polyketide synthase; ro 97.9 8.8E-06 3E-10 65.8 5.1 98 4-130 38-140 (198)
355 3nep_X Malate dehydrogenase; h 97.9 0.0001 3.5E-09 63.7 11.9 113 6-128 1-119 (314)
356 2aef_A Calcium-gated potassium 97.9 6.5E-06 2.2E-10 68.5 3.7 71 5-86 9-80 (234)
357 3c24_A Putative oxidoreductase 97.9 1.7E-05 5.9E-10 68.0 6.5 70 1-86 7-76 (286)
358 1t2d_A LDH-P, L-lactate dehydr 97.9 5.5E-05 1.9E-09 65.9 9.6 120 1-128 1-127 (322)
359 2nqt_A N-acetyl-gamma-glutamyl 97.9 7.7E-06 2.6E-10 71.9 4.2 99 5-131 9-114 (352)
360 3d0o_A L-LDH 1, L-lactate dehy 97.9 0.00015 5E-09 63.0 12.3 116 4-128 5-124 (317)
361 1ez4_A Lactate dehydrogenase; 97.9 0.00013 4.4E-09 63.4 11.3 115 5-128 5-122 (318)
362 2zqz_A L-LDH, L-lactate dehydr 97.8 0.00011 3.9E-09 63.9 11.0 116 4-128 8-126 (326)
363 2x0j_A Malate dehydrogenase; o 97.8 0.00013 4.3E-09 62.4 11.0 115 6-128 1-119 (294)
364 1ldn_A L-lactate dehydrogenase 97.8 0.00028 9.6E-09 61.3 13.4 119 1-128 1-124 (316)
365 3l9w_A Glutathione-regulated p 97.8 3.8E-05 1.3E-09 69.3 7.6 74 4-86 3-77 (413)
366 2v6b_A L-LDH, L-lactate dehydr 97.8 0.00017 5.8E-09 62.3 11.5 114 6-128 1-117 (304)
367 2xxj_A L-LDH, L-lactate dehydr 97.8 0.0002 6.7E-09 62.0 11.8 114 6-128 1-117 (310)
368 2hcy_A Alcohol dehydrogenase 1 97.8 5.9E-05 2E-09 66.6 8.4 74 4-86 169-247 (347)
369 1guz_A Malate dehydrogenase; o 97.8 0.00021 7.4E-09 61.8 11.5 115 6-128 1-119 (310)
370 2hjr_A Malate dehydrogenase; m 97.8 0.00052 1.8E-08 59.9 13.8 114 5-128 14-132 (328)
371 3ldh_A Lactate dehydrogenase; 97.7 0.00039 1.3E-08 60.3 12.5 114 4-128 20-139 (330)
372 2eez_A Alanine dehydrogenase; 97.7 2.7E-05 9.2E-10 69.3 5.1 74 5-87 166-239 (369)
373 1v3u_A Leukotriene B4 12- hydr 97.7 4.7E-05 1.6E-09 66.8 6.4 74 4-86 145-223 (333)
374 4h7p_A Malate dehydrogenase; s 97.7 0.00045 1.5E-08 60.4 12.1 173 5-200 24-211 (345)
375 4g65_A TRK system potassium up 97.6 3.7E-05 1.3E-09 70.4 4.8 74 4-85 2-76 (461)
376 3gg2_A Sugar dehydrogenase, UD 97.6 7.5E-05 2.6E-09 68.1 6.6 81 5-87 2-88 (450)
377 3tnl_A Shikimate dehydrogenase 97.6 5.3E-05 1.8E-09 65.5 5.0 82 4-86 153-235 (315)
378 1hyh_A L-hicdh, L-2-hydroxyiso 97.6 0.00045 1.5E-08 59.8 11.0 115 5-128 1-123 (309)
379 2ewd_A Lactate dehydrogenase,; 97.6 0.00018 6.2E-09 62.6 8.5 118 1-129 1-123 (317)
380 1qor_A Quinone oxidoreductase; 97.6 6.7E-05 2.3E-09 65.6 5.4 74 4-86 140-218 (327)
381 7mdh_A Protein (malate dehydro 97.6 0.001 3.5E-08 58.6 12.9 172 5-199 32-217 (375)
382 2j3h_A NADP-dependent oxidored 97.6 0.0001 3.5E-09 64.9 6.4 75 4-86 155-234 (345)
383 2ozp_A N-acetyl-gamma-glutamyl 97.6 8.4E-05 2.9E-09 65.3 5.7 97 5-130 4-102 (345)
384 2eih_A Alcohol dehydrogenase; 97.6 0.00012 4E-09 64.6 6.6 97 4-129 166-267 (343)
385 1xyg_A Putative N-acetyl-gamma 97.6 9.7E-05 3.3E-09 65.2 6.0 98 6-130 17-115 (359)
386 3oj0_A Glutr, glutamyl-tRNA re 97.5 3.9E-05 1.3E-09 58.5 3.0 70 5-87 21-90 (144)
387 1lnq_A MTHK channels, potassiu 97.5 9.1E-05 3.1E-09 65.0 5.8 70 6-86 116-186 (336)
388 1wly_A CAAR, 2-haloacrylate re 97.5 9E-05 3.1E-09 65.0 5.6 75 4-87 145-224 (333)
389 3k96_A Glycerol-3-phosphate de 97.5 6.7E-05 2.3E-09 66.3 4.7 83 1-85 25-107 (356)
390 1lld_A L-lactate dehydrogenase 97.5 0.00094 3.2E-08 58.0 11.9 115 4-127 6-124 (319)
391 2hjs_A USG-1 protein homolog; 97.5 0.00025 8.6E-09 62.1 8.0 94 5-130 6-102 (340)
392 1a5z_A L-lactate dehydrogenase 97.5 0.00068 2.3E-08 58.9 10.7 113 6-128 1-117 (319)
393 1nyt_A Shikimate 5-dehydrogena 97.5 0.00017 5.7E-09 61.3 6.7 73 4-87 118-190 (271)
394 2ew2_A 2-dehydropantoate 2-red 97.5 0.00016 5.3E-09 62.8 6.6 74 4-86 2-83 (316)
395 2j8z_A Quinone oxidoreductase; 97.5 0.00012 4.1E-09 64.8 5.7 75 4-87 162-241 (354)
396 1yb5_A Quinone oxidoreductase; 97.5 0.00012 3.9E-09 64.8 5.6 74 4-86 170-248 (351)
397 2vns_A Metalloreductase steap3 97.5 0.00012 4.1E-09 59.9 5.1 66 4-86 27-92 (215)
398 3dr3_A N-acetyl-gamma-glutamyl 97.5 0.00076 2.6E-08 58.8 10.3 102 5-130 4-109 (337)
399 4huj_A Uncharacterized protein 97.4 0.00011 3.6E-09 60.4 4.3 68 4-86 22-90 (220)
400 4b7c_A Probable oxidoreductase 97.4 0.00016 5.5E-09 63.4 5.2 74 4-86 149-227 (336)
401 3g0o_A 3-hydroxyisobutyrate de 97.4 0.00024 8.1E-09 61.4 6.2 68 4-86 6-73 (303)
402 3pi7_A NADH oxidoreductase; gr 97.3 0.00074 2.5E-08 59.5 9.1 94 6-129 166-265 (349)
403 1jw9_B Molybdopterin biosynthe 97.3 0.00051 1.7E-08 57.5 7.5 103 5-128 31-154 (249)
404 2zb4_A Prostaglandin reductase 97.3 0.00018 6.3E-09 63.7 5.0 72 6-86 162-239 (357)
405 2c0c_A Zinc binding alcohol de 97.3 0.0004 1.4E-08 61.6 7.2 97 4-130 163-264 (362)
406 1mv8_A GMD, GDP-mannose 6-dehy 97.3 0.00038 1.3E-08 63.3 7.2 80 6-87 1-86 (436)
407 3vtf_A UDP-glucose 6-dehydroge 97.3 0.00045 1.5E-08 62.3 7.4 121 4-129 20-146 (444)
408 4dup_A Quinone oxidoreductase; 97.3 0.00026 8.8E-09 62.6 5.8 75 4-87 167-245 (353)
409 3pwk_A Aspartate-semialdehyde 97.3 0.00092 3.1E-08 58.9 9.2 94 5-130 2-98 (366)
410 2d4a_B Malate dehydrogenase; a 97.3 0.0011 3.9E-08 57.1 9.6 114 7-128 1-117 (308)
411 4dpk_A Malonyl-COA/succinyl-CO 97.3 0.00049 1.7E-08 60.6 7.2 101 5-131 7-114 (359)
412 4dpl_A Malonyl-COA/succinyl-CO 97.3 0.00049 1.7E-08 60.6 7.2 101 5-131 7-114 (359)
413 2i6t_A Ubiquitin-conjugating e 97.3 0.0024 8.3E-08 54.9 11.4 111 5-128 14-126 (303)
414 4eye_A Probable oxidoreductase 97.3 0.00051 1.8E-08 60.4 7.4 73 4-87 159-237 (342)
415 3jyn_A Quinone oxidoreductase; 97.3 0.00029 9.8E-09 61.5 5.4 75 4-87 140-219 (325)
416 3gms_A Putative NADPH:quinone 97.2 0.00051 1.7E-08 60.3 6.9 75 4-87 144-223 (340)
417 4gbj_A 6-phosphogluconate dehy 97.2 0.00056 1.9E-08 58.8 7.0 67 4-86 4-70 (297)
418 2pv7_A T-protein [includes: ch 97.2 0.00042 1.4E-08 59.6 6.2 38 3-40 19-56 (298)
419 3qwb_A Probable quinone oxidor 97.2 0.00034 1.2E-08 61.2 5.7 96 4-128 148-248 (334)
420 1ys4_A Aspartate-semialdehyde 97.2 0.00054 1.8E-08 60.5 6.9 34 5-38 8-42 (354)
421 1y81_A Conserved hypothetical 97.2 0.0047 1.6E-07 46.4 11.1 86 5-128 14-102 (138)
422 1pjc_A Protein (L-alanine dehy 97.2 0.00019 6.3E-09 63.7 3.8 74 5-87 167-240 (361)
423 3ggo_A Prephenate dehydrogenas 97.2 0.00073 2.5E-08 58.6 7.4 69 4-86 32-103 (314)
424 2cdc_A Glucose dehydrogenase g 97.2 0.00093 3.2E-08 59.3 8.0 70 5-87 181-256 (366)
425 4f3y_A DHPR, dihydrodipicolina 97.2 0.00077 2.6E-08 56.9 7.1 74 5-86 7-82 (272)
426 3qha_A Putative oxidoreductase 97.2 0.00039 1.3E-08 59.8 5.4 65 5-86 15-79 (296)
427 2ph5_A Homospermidine synthase 97.2 0.0012 4.1E-08 59.7 8.5 95 5-129 13-114 (480)
428 1jvb_A NAD(H)-dependent alcoho 97.2 0.00052 1.8E-08 60.5 6.2 75 4-87 170-250 (347)
429 2h78_A Hibadh, 3-hydroxyisobut 97.2 0.0005 1.7E-08 59.3 5.8 67 4-86 2-68 (302)
430 3jyo_A Quinate/shikimate dehyd 97.2 0.00043 1.5E-08 58.9 5.2 78 4-87 126-204 (283)
431 4ezb_A Uncharacterized conserv 97.1 0.00035 1.2E-08 60.8 4.6 69 3-86 22-96 (317)
432 3doj_A AT3G25530, dehydrogenas 97.1 0.0006 2.1E-08 59.0 6.1 67 4-86 20-86 (310)
433 3g79_A NDP-N-acetyl-D-galactos 97.1 0.0017 5.7E-08 59.5 9.0 36 4-40 17-54 (478)
434 2r00_A Aspartate-semialdehyde 97.1 0.0013 4.4E-08 57.5 8.0 94 5-130 3-99 (336)
435 1iz0_A Quinone oxidoreductase; 97.1 0.00043 1.5E-08 59.7 4.9 73 4-86 125-197 (302)
436 3t4e_A Quinate/shikimate dehyd 97.1 0.00032 1.1E-08 60.5 4.0 83 4-87 147-230 (312)
437 2ep5_A 350AA long hypothetical 97.1 0.0015 5E-08 57.5 8.2 32 5-36 4-36 (350)
438 3pid_A UDP-glucose 6-dehydroge 97.1 0.00061 2.1E-08 61.4 5.8 80 4-86 35-118 (432)
439 1bg6_A N-(1-D-carboxylethyl)-L 97.1 0.0011 3.9E-08 58.4 7.5 74 5-86 4-84 (359)
440 3pdu_A 3-hydroxyisobutyrate de 97.1 0.00046 1.6E-08 59.1 4.7 66 5-86 1-66 (287)
441 1nvt_A Shikimate 5'-dehydrogen 97.1 0.0002 6.7E-09 61.4 2.3 78 4-88 127-204 (287)
442 2egg_A AROE, shikimate 5-dehyd 97.1 0.00021 7.1E-09 61.5 2.4 75 4-88 140-215 (297)
443 2d8a_A PH0655, probable L-thre 97.0 0.001 3.4E-08 58.6 6.8 95 5-128 168-268 (348)
444 2ahr_A Putative pyrroline carb 97.0 0.00055 1.9E-08 57.6 4.8 68 4-86 2-69 (259)
445 3qy9_A DHPR, dihydrodipicolina 97.0 0.0017 5.8E-08 53.8 7.5 34 5-39 3-37 (243)
446 3obb_A Probable 3-hydroxyisobu 97.0 0.00087 3E-08 57.6 5.8 67 4-86 2-68 (300)
447 4dll_A 2-hydroxy-3-oxopropiona 97.0 0.00091 3.1E-08 58.2 5.8 67 4-86 30-96 (320)
448 1p77_A Shikimate 5-dehydrogena 97.0 0.0012 4.2E-08 55.9 6.4 73 4-87 118-190 (272)
449 2vhw_A Alanine dehydrogenase; 97.0 0.00034 1.1E-08 62.4 3.0 75 4-87 167-241 (377)
450 4e12_A Diketoreductase; oxidor 97.0 0.0011 3.9E-08 56.5 6.2 40 5-45 4-43 (283)
451 3pef_A 6-phosphogluconate dehy 97.0 0.00092 3.2E-08 57.2 5.6 65 6-86 2-66 (287)
452 3l6d_A Putative oxidoreductase 97.0 0.00071 2.4E-08 58.5 4.9 66 5-86 9-74 (306)
453 1vpd_A Tartronate semialdehyde 97.0 0.00093 3.2E-08 57.4 5.7 66 5-86 5-70 (299)
454 3qsg_A NAD-binding phosphogluc 96.9 0.00073 2.5E-08 58.6 4.8 68 3-86 22-92 (312)
455 1p9l_A Dihydrodipicolinate red 96.9 0.0057 1.9E-07 50.7 9.9 72 6-86 1-78 (245)
456 2uyy_A N-PAC protein; long-cha 96.9 0.0015 5.2E-08 56.6 6.8 66 5-86 30-95 (316)
457 4e21_A 6-phosphogluconate dehy 96.9 0.00094 3.2E-08 58.9 5.4 66 5-86 22-90 (358)
458 3gaz_A Alcohol dehydrogenase s 96.9 0.0015 5.3E-08 57.3 6.8 70 4-86 150-225 (343)
459 4a7p_A UDP-glucose dehydrogena 96.9 0.0022 7.4E-08 58.3 7.6 80 6-87 9-94 (446)
460 2y0c_A BCEC, UDP-glucose dehyd 96.9 0.0012 4.2E-08 60.6 5.9 81 5-87 8-94 (478)
461 3ff4_A Uncharacterized protein 96.9 0.0061 2.1E-07 44.6 8.6 84 3-125 2-88 (122)
462 1zud_1 Adenylyltransferase THI 96.9 0.0031 1.1E-07 52.7 7.8 104 5-129 28-152 (251)
463 4e4t_A Phosphoribosylaminoimid 96.9 0.0014 4.8E-08 59.3 6.1 69 4-83 34-102 (419)
464 3gt0_A Pyrroline-5-carboxylate 96.8 0.00068 2.3E-08 56.6 3.7 66 5-85 2-71 (247)
465 4a0s_A Octenoyl-COA reductase/ 96.8 0.0019 6.4E-08 59.0 6.8 44 4-47 220-263 (447)
466 2dpo_A L-gulonate 3-dehydrogen 96.8 0.0019 6.4E-08 56.0 6.4 44 1-45 1-45 (319)
467 3d1l_A Putative NADP oxidoredu 96.8 0.0011 3.6E-08 56.1 4.8 67 5-86 10-77 (266)
468 3fef_A Putative glucosidase LP 96.8 0.0035 1.2E-07 56.7 8.4 122 1-129 1-148 (450)
469 1yqd_A Sinapyl alcohol dehydro 96.8 0.0015 5E-08 58.0 5.8 74 4-87 187-261 (366)
470 3uog_A Alcohol dehydrogenase; 96.8 0.0037 1.3E-07 55.3 8.4 95 4-129 189-289 (363)
471 2d59_A Hypothetical protein PH 96.8 0.015 5E-07 44.0 10.6 85 5-127 22-109 (144)
472 3cky_A 2-hydroxymethyl glutara 96.8 0.0014 4.7E-08 56.4 5.5 69 1-86 1-69 (301)
473 3p2y_A Alanine dehydrogenase/p 96.8 0.0012 4.1E-08 58.2 5.0 73 5-86 184-274 (381)
474 1u8x_X Maltose-6'-phosphate gl 96.8 0.00091 3.1E-08 61.1 4.4 120 5-129 28-173 (472)
475 3jtm_A Formate dehydrogenase, 96.8 0.0056 1.9E-07 53.6 9.2 68 4-87 163-230 (351)
476 1piw_A Hypothetical zinc-type 96.8 0.0023 7.9E-08 56.6 6.8 74 4-87 179-253 (360)
477 3orq_A N5-carboxyaminoimidazol 96.8 0.0015 5E-08 58.3 5.6 69 4-83 11-79 (377)
478 1yb4_A Tartronic semialdehyde 96.8 0.0018 6E-08 55.5 5.9 66 4-86 2-67 (295)
479 2rir_A Dipicolinate synthase, 96.8 0.0026 8.9E-08 54.7 7.0 70 4-87 156-225 (300)
480 3gvx_A Glycerate dehydrogenase 96.8 0.0085 2.9E-07 51.0 9.8 63 4-87 121-183 (290)
481 2q3e_A UDP-glucose 6-dehydroge 96.8 0.0012 4.1E-08 60.6 4.9 80 5-86 5-91 (467)
482 3tqh_A Quinone oxidoreductase; 96.7 0.0017 5.8E-08 56.5 5.6 73 4-86 152-224 (321)
483 2o3j_A UDP-glucose 6-dehydroge 96.7 0.0017 5.9E-08 59.7 5.8 41 4-45 8-50 (481)
484 2o7s_A DHQ-SDH PR, bifunctiona 96.7 0.0013 4.3E-08 61.3 4.9 70 5-87 364-434 (523)
485 3two_A Mannitol dehydrogenase; 96.7 0.0033 1.1E-07 55.2 7.4 69 4-87 176-244 (348)
486 1rjw_A ADH-HT, alcohol dehydro 96.7 0.0021 7.2E-08 56.3 6.0 72 4-86 164-239 (339)
487 4dio_A NAD(P) transhydrogenase 96.7 0.0026 8.9E-08 56.6 6.4 74 5-87 190-285 (405)
488 2vn8_A Reticulon-4-interacting 96.7 0.0039 1.3E-07 55.4 7.7 74 4-87 183-258 (375)
489 3fbg_A Putative arginate lyase 96.7 0.0018 6E-08 57.0 5.3 72 4-86 150-226 (346)
490 2duw_A Putative COA-binding pr 96.7 0.0068 2.3E-07 46.0 7.9 34 5-38 13-49 (145)
491 3d4o_A Dipicolinate synthase s 96.7 0.0034 1.2E-07 53.8 6.9 69 4-86 154-222 (293)
492 3phh_A Shikimate dehydrogenase 96.7 0.0053 1.8E-07 51.6 7.8 65 5-87 118-182 (269)
493 1gpj_A Glutamyl-tRNA reductase 96.7 0.0022 7.5E-08 57.7 5.8 71 4-87 166-237 (404)
494 3tri_A Pyrroline-5-carboxylate 96.7 0.0025 8.5E-08 54.2 5.8 66 5-85 3-71 (280)
495 3pwz_A Shikimate dehydrogenase 96.6 0.0061 2.1E-07 51.5 8.1 72 4-87 119-191 (272)
496 1xa0_A Putative NADPH dependen 96.6 0.0046 1.6E-07 53.9 7.6 71 7-86 152-225 (328)
497 2g5c_A Prephenate dehydrogenas 96.6 0.0039 1.3E-07 53.0 7.0 68 5-86 1-71 (281)
498 3dtt_A NADP oxidoreductase; st 96.6 0.0014 4.8E-08 54.6 4.1 37 4-41 18-54 (245)
499 2gcg_A Glyoxylate reductase/hy 96.6 0.007 2.4E-07 52.7 8.6 67 4-87 154-220 (330)
500 3m6i_A L-arabinitol 4-dehydrog 96.6 0.01 3.5E-07 52.4 9.8 76 4-86 179-261 (363)
No 1
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=100.00 E-value=1.1e-49 Score=355.44 Aligned_cols=331 Identities=79% Similarity=1.311 Sum_probs=245.0
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
|+.++|+||||||+||||++++++|+++|++|++++|+.....+...+...+....+++++.+|++|.+++.++++++|+
T Consensus 1 ~~~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (337)
T 2c29_D 1 MGSQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTG 80 (337)
T ss_dssp -----CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSE
T ss_pred CCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCE
Confidence 77788999999999999999999999999999999998775444433322221113689999999999999999999999
Q ss_pred EEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCC
Q 040253 81 VFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTG 160 (338)
Q Consensus 81 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~ 160 (338)
|||+|+.......++....++.|+.++.+++++|.+.+.+++|||+||.++++.......+++|++|...+...+...|.
T Consensus 81 Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~ 160 (337)
T 2c29_D 81 VFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTA 160 (337)
T ss_dssp EEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTT
T ss_pred EEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCcc
Confidence 99999876433233334588999999999999998765468999999988544222334567888766544332233466
Q ss_pred chHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHH
Q 040253 161 WMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIF 240 (338)
Q Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 240 (338)
+.|+.+|.++|.+++.+++++|++++++||+++|||+....+...+........+....+......+|+|++|+|++++.
T Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a~~~ 240 (337)
T 2c29_D 161 WMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNAHIY 240 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHHHHH
Confidence 78999999999999998877899999999999999986554443332221112232222222222459999999999999
Q ss_pred hhcCCCCCCceEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCccccccccccchhhhhhcCCcccccHHHHHHHHHHHHH
Q 040253 241 LFEHPNAKGRYICSSHPATILELAKFLREKYPEFNVPTEFEDVDENMKNMLFSSKKLTDLGFKFKYSLDDMFTGAVDTCR 320 (338)
Q Consensus 241 ~l~~~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~i~~~~~~~~ 320 (338)
+++++...+.|++++...|++|+++.+.+.++...+|..+...+.......+|++++++|||+|+++++++|+++++|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~l~e~l~~~~~~~~ 320 (337)
T 2c29_D 241 LFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENLKSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCR 320 (337)
T ss_dssp HHHCTTCCEEEEECCEEEEHHHHHHHHHHHCTTSCCCSCCTTCCTTCCCCEECCHHHHHHTCCCCCCHHHHHHHHHHHHH
T ss_pred HhcCcccCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCcccCCCccccccHHHHHHcCCCcCCCHHHHHHHHHHHHH
Confidence 99876666788887777999999999999886555554443333334556788999966999999999999999999999
Q ss_pred HcCCCCCccCC
Q 040253 321 AKGLLPLLCEN 331 (338)
Q Consensus 321 ~~~~~~~~~~~ 331 (338)
+.+.++...+.
T Consensus 321 ~~~~~~~~~~~ 331 (337)
T 2c29_D 321 AKGLLPPSHEK 331 (337)
T ss_dssp HTTSSCSCC--
T ss_pred HcCCCCccccC
Confidence 99988765443
No 2
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=100.00 E-value=1.4e-47 Score=338.04 Aligned_cols=296 Identities=15% Similarity=0.217 Sum_probs=233.9
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
+|+|||||||||||++++++|+++|++|++++|++.... + ++++++.+|++ .+++.++++++|+|||+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~----------~~~~~~~~Dl~-~~~~~~~~~~~d~Vih~ 69 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I----------NDYEYRVSDYT-LEDLINQLNDVDAVVHL 69 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC----------------CCEEEECCCC-HHHHHHHTTTCSEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C----------CceEEEEcccc-HHHHHHhhcCCCEEEEc
Confidence 589999999999999999999999999999999844322 2 37899999999 99999999999999999
Q ss_pred cccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHH
Q 040253 85 ATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYF 164 (338)
Q Consensus 85 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~ 164 (338)
|+..... .....++.|+.++.++++++++.+ +++|||+||.++|+ .....+++|++ +..|.+.|+
T Consensus 70 a~~~~~~---~~~~~~~~n~~~~~~ll~a~~~~~-~~r~v~~SS~~vyg--~~~~~~~~E~~---------~~~p~~~Y~ 134 (311)
T 3m2p_A 70 AATRGSQ---GKISEFHDNEILTQNLYDACYENN-ISNIVYASTISAYS--DETSLPWNEKE---------LPLPDLMYG 134 (311)
T ss_dssp CCCCCSS---SCGGGTHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCC--CGGGCSBCTTS---------CCCCSSHHH
T ss_pred cccCCCC---ChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEccHHHhC--CCCCCCCCCCC---------CCCCCchhH
Confidence 9976643 345789999999999999999998 89999999999998 44456788887 556888999
Q ss_pred HHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhh-hcccCCCCC-CCCCC-CccccHHHHHHHHHHh
Q 040253 165 VSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALS-PITRNEAHY-PIIKQ-GQFVHLDDLCSAHIFL 241 (338)
Q Consensus 165 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~-~~~i~v~D~a~~~~~~ 241 (338)
.+|+++|.+++.+++++|++++++||+++|||+.... ..+..++. ...+....+ +.+.. ++++|++|+|++++.+
T Consensus 135 ~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~ 212 (311)
T 3m2p_A 135 VSKLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNN--YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYA 212 (311)
T ss_dssp HHHHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--C--CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCC--CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHH
Confidence 9999999999999998999999999999999987643 12222221 122433322 33333 6899999999999999
Q ss_pred hcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCCCCC-ccccccccccchhhhhh-cCCcccccHHHHHHHHHHH
Q 040253 242 FEHPNAKGRYIC-SSHPATILELAKFLREKYPEFNVPTEFED-VDENMKNMLFSSKKLTD-LGFKFKYSLDDMFTGAVDT 318 (338)
Q Consensus 242 l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-lg~~~~~~~~~~i~~~~~~ 318 (338)
++++..+++||+ +++++|+.|+++.+.+.+|.......... .+.......+|++++++ |||+|+++++++|+++++|
T Consensus 213 ~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~~~~~~ 292 (311)
T 3m2p_A 213 LKQEKVSGTFNIGSGDALTNYEVANTINNAFGNKDNLLVKNPNANEGIHSSYMDSSKAKELLDFSTDYNFATAVEEIHLL 292 (311)
T ss_dssp TTCTTCCEEEEECCSCEECHHHHHHHHHHHTTCTTCEEECSSSBCCSCCCBCBCCHHHHHHSCCCCSCCHHHHHHHHHHH
T ss_pred HhcCCCCCeEEeCCCCcccHHHHHHHHHHHhCCCCcceecCCCCCCCcCceecCHHHHHHHhCCCcccCHHHHHHHHHHH
Confidence 998877779988 56889999999999999985322222222 34456677899999998 9999999999999999999
Q ss_pred HHHcCCCCCcc
Q 040253 319 CRAKGLLPLLC 329 (338)
Q Consensus 319 ~~~~~~~~~~~ 329 (338)
+++.+..+.+-
T Consensus 293 ~~~~~~~~~~~ 303 (311)
T 3m2p_A 293 MRGLDDVPLWY 303 (311)
T ss_dssp HCC--------
T ss_pred HHhcccCccee
Confidence 99988876543
No 3
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=100.00 E-value=5.9e-47 Score=335.69 Aligned_cols=318 Identities=42% Similarity=0.801 Sum_probs=229.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEc-CCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVR-DPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
+|+||||||+||||++++++|+++|++|++++| ++........+..++....+++++.+|++|.+++.++++++|+|||
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih 80 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFH 80 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEE
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEE
Confidence 478999999999999999999999999999998 5432111111111111013688999999999999999999999999
Q ss_pred ecccCCCCCCCccchhhhhhhHHHHHHHHHHHhC-CCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCch
Q 040253 84 LATPMDFESKDPENEVIRPTINGMVSIMRACKNA-KTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWM 162 (338)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~ 162 (338)
+|+.......++...+++.|+.++.++++++.+. + +++|||+||.++++.......+++|++|...+...+..+..+.
T Consensus 81 ~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~ 159 (322)
T 2p4h_X 81 TASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKT-VKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWN 159 (322)
T ss_dssp CCCCC--------CHHHHHHHHHHHHHHHHHTTCSS-CCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHH
T ss_pred cCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCC-ccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCccccc
Confidence 9986533222333458999999999999999987 6 7899999998755422223446788776544332222212237
Q ss_pred HHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhh
Q 040253 163 YFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLF 242 (338)
Q Consensus 163 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l 242 (338)
|+.+|.++|.++.++++++|++++++||+++|||+........+........+....++. ...+++|++|+|++++.++
T Consensus 160 Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~i~v~Dva~a~~~~~ 238 (322)
T 2p4h_X 160 YAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGV-TRFHMVHVDDVARAHIYLL 238 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCE-EEEEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcC-CCcCEEEHHHHHHHHHHHh
Confidence 999999999999999888899999999999999986543333222221212233222322 2347999999999999999
Q ss_pred cCCCCCCceEEecCCCCHHHHHHHHHHhCCCCCCCCC--CCCccccccccccchhhhhhcCCcccccHHHHHHHHHHHHH
Q 040253 243 EHPNAKGRYICSSHPATILELAKFLREKYPEFNVPTE--FEDVDENMKNMLFSSKKLTDLGFKFKYSLDDMFTGAVDTCR 320 (338)
Q Consensus 243 ~~~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~i~~~~~~~~ 320 (338)
+++...|.||++++++|+.|+++.+.+.++...+|.. +...+.. ....+|++++++|||+|+++++++|+++++|++
T Consensus 239 ~~~~~~g~~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~k~~~lG~~p~~~~~~~l~~~~~~~~ 317 (322)
T 2p4h_X 239 ENSVPGGRYNCSPFIVPIEEMSQLLSAKYPEYQILTVDELKEIKGA-RLPDLNTKKLVDAGFDFKYTIEDMFDDAIQCCK 317 (322)
T ss_dssp HSCCCCEEEECCCEEEEHHHHHHHHHHHCTTSCCCCTTTTTTCCCE-ECCEECCHHHHHTTCCCCCCHHHHHHHHHHHHH
T ss_pred hCcCCCCCEEEcCCCCCHHHHHHHHHHhCCCCCCCCCccccCCCCC-cceecccHHHHHhCCccCCCHHHHHHHHHHHHH
Confidence 8765556799877889999999999998865445443 2221112 456788999977999999999999999999999
Q ss_pred HcCCC
Q 040253 321 AKGLL 325 (338)
Q Consensus 321 ~~~~~ 325 (338)
+++.+
T Consensus 318 ~~~~~ 322 (322)
T 2p4h_X 318 EKGYL 322 (322)
T ss_dssp HHTCC
T ss_pred hcCCC
Confidence 87753
No 4
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=100.00 E-value=9.7e-48 Score=343.05 Aligned_cols=321 Identities=48% Similarity=0.830 Sum_probs=228.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
++|+||||||+||||++++++|+++|++|++++|+.++......+..++ ...+++++.+|++|++++.++++++|+|||
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih 86 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ-ELGDLKIFRADLTDELSFEAPIAGCDFVFH 86 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG-GGSCEEEEECCTTTSSSSHHHHTTCSEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC-CCCcEEEEecCCCChHHHHHHHcCCCEEEE
Confidence 3589999999999999999999999999999999765422111111111 114689999999999999999999999999
Q ss_pred ecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCcee-eeccC-CCCCCcCCCCCCchhhhhhccCCCc
Q 040253 84 LATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGT-LDVEE-HRKPVYDETSWSDLDFVRSVKMTGW 161 (338)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v-~~~~~-~~~~~~~e~~~~~~~~~~~~~~p~~ 161 (338)
+|+.......++..++++.|+.++.+++++|.+.+.+++|||+||.++ |+... ....+++|++|...+...+..++.+
T Consensus 87 ~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~ 166 (338)
T 2rh8_A 87 VATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTW 166 (338)
T ss_dssp ESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCC
T ss_pred eCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccc
Confidence 998764332333345899999999999999998743789999999874 33111 1113678887654332222222334
Q ss_pred hHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCC-------CCCCccccHHHH
Q 040253 162 MYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPI-------IKQGQFVHLDDL 234 (338)
Q Consensus 162 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~i~v~D~ 234 (338)
.|+.+|.++|.+++.+++++|++++++||+++|||+........+........+....++. .+.++|+|++|+
T Consensus 167 ~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~v~Dv 246 (338)
T 2rh8_A 167 GYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAHVEDV 246 (338)
T ss_dssp CCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEEHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEEHHHH
Confidence 7999999999999998887899999999999999986554433322221111222111110 011379999999
Q ss_pred HHHHHHhhcCCCCCCceEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCccccccccccchhhhhhcCCcccccHHHHHHH
Q 040253 235 CSAHIFLFEHPNAKGRYICSSHPATILELAKFLREKYPEFNVPTEFEDVDENMKNMLFSSKKLTDLGFKFKYSLDDMFTG 314 (338)
Q Consensus 235 a~~~~~~l~~~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~i~~ 314 (338)
|++++.+++++...+.||++++.+|+.|+++.+.+.++...+|..+...+.. ....+|++++++|||+|+++++++|++
T Consensus 247 a~a~~~~~~~~~~~~~~~~~~~~~s~~e~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~d~~k~~~lG~~p~~~l~~gl~~ 325 (338)
T 2rh8_A 247 CRAHIFVAEKESASGRYICCAANTSVPELAKFLSKRYPQYKVPTDFGDFPPK-SKLIISSEKLVKEGFSFKYGIEEIYDE 325 (338)
T ss_dssp HHHHHHHHHCTTCCEEEEECSEEECHHHHHHHHHHHCTTSCCCCCCTTSCSS-CSCCCCCHHHHHHTCCCSCCHHHHHHH
T ss_pred HHHHHHHHcCCCcCCcEEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCCCcC-cceeechHHHHHhCCCCCCCHHHHHHH
Confidence 9999999987666778988777799999999999988754555443332222 236788999977999999999999999
Q ss_pred HHHHHHHcCCCC
Q 040253 315 AVDTCRAKGLLP 326 (338)
Q Consensus 315 ~~~~~~~~~~~~ 326 (338)
+++|+++.+.++
T Consensus 326 ~~~~~~~~~~~~ 337 (338)
T 2rh8_A 326 SVEYFKAKGLLQ 337 (338)
T ss_dssp HHHHHHHTTCC-
T ss_pred HHHHHHHcCCCC
Confidence 999999988763
No 5
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=100.00 E-value=1.4e-47 Score=343.86 Aligned_cols=308 Identities=17% Similarity=0.161 Sum_probs=237.9
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc-HHHHHHHhcCCCC--CCcEEEEecccCCCCCchhhhCCcc
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN-KKKVKHLLELPKA--STHLTLWKADLAEEGNFDEPIRGCT 79 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d 79 (338)
.++|+|||||||||||++++++|+++|++|++++|+... ......+...... .++++++.+|++|++++.++++++|
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 102 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVD 102 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCC
Confidence 357899999999999999999999999999999997653 2223322221100 0478999999999999999999999
Q ss_pred EEEEecccCCC-CCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccC
Q 040253 80 GVFHLATPMDF-ESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKM 158 (338)
Q Consensus 80 ~vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~ 158 (338)
+|||+|+.... .........++.|+.++.+++++|++.+ +++|||+||.++|+ .....+++|++ +..
T Consensus 103 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vyg--~~~~~~~~E~~---------~~~ 170 (351)
T 3ruf_A 103 HVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQ-VQSFTYAASSSTYG--DHPALPKVEEN---------IGN 170 (351)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGT--TCCCSSBCTTC---------CCC
T ss_pred EEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEecHHhcC--CCCCCCCccCC---------CCC
Confidence 99999996441 1112334678999999999999999998 89999999999998 44556788887 446
Q ss_pred CCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCC--hhHHHhh-hhcccCCCC-CCCCCC-CccccHHH
Q 040253 159 TGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMP--PSLITAL-SPITRNEAH-YPIIKQ-GQFVHLDD 233 (338)
Q Consensus 159 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~-~~~~~~~~~-~~~~~~-~~~i~v~D 233 (338)
|.+.|+.+|+.+|.+++.+++++|++++++||+++|||+...... ..+..++ ....+.... ++.+.. ++|+|++|
T Consensus 171 p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D 250 (351)
T 3ruf_A 171 PLSPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDN 250 (351)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHH
Confidence 888999999999999999999889999999999999998654311 1222222 222343332 233333 78999999
Q ss_pred HHHHHHHhhcC--CCCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCC-----CCCccccccccccchhhhhh-cCCcc
Q 040253 234 LCSAHIFLFEH--PNAKGRYIC-SSHPATILELAKFLREKYPEFNVPTE-----FEDVDENMKNMLFSSKKLTD-LGFKF 304 (338)
Q Consensus 234 ~a~~~~~~l~~--~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~-lg~~~ 304 (338)
+|++++.++.. ...+++||+ +++++|+.|+++.+.+.+|....... ....+.......+|++++++ |||+|
T Consensus 251 va~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p 330 (351)
T 3ruf_A 251 VIQMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIKYREFRSGDVRHSQADVTKAIDLLKYRP 330 (351)
T ss_dssp HHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----EEECCCTTCCSBCCBCCHHHHHHHCCCC
T ss_pred HHHHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCcccccccccccccCCCCCccceeeeCHHHHHHHhCCCC
Confidence 99999999987 334668988 56889999999999999875222111 11123345567899999998 99999
Q ss_pred cccHHHHHHHHHHHHHHc
Q 040253 305 KYSLDDMFTGAVDTCRAK 322 (338)
Q Consensus 305 ~~~~~~~i~~~~~~~~~~ 322 (338)
+++++++|+++++|++++
T Consensus 331 ~~~~~~~l~~~~~~~~~~ 348 (351)
T 3ruf_A 331 NIKIREGLRLSMPWYVRF 348 (351)
T ss_dssp CCCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 999999999999999864
No 6
>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0
Probab=100.00 E-value=1.1e-46 Score=332.77 Aligned_cols=294 Identities=21% Similarity=0.229 Sum_probs=225.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCC-CcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDP-DNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
||+||||||+||||++++++|+++|+ ++++++.. ...... ..+++++.+|++| +++.++++++|+|||
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~-~v~~~~~~~~~~~~~---------~~~~~~~~~Dl~~-~~~~~~~~~~d~vih 69 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESNE-IVVIDNLSSGNEEFV---------NEAARLVKADLAA-DDIKDYLKGAEEVWH 69 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTSC-EEEECCCSSCCGGGS---------CTTEEEECCCTTT-SCCHHHHTTCSEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCC-EEEEEcCCCCChhhc---------CCCcEEEECcCCh-HHHHHHhcCCCEEEE
Confidence 47999999999999999999999995 55555533 322111 1578999999999 999999999999999
Q ss_pred ecccCC-CCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCch
Q 040253 84 LATPMD-FESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWM 162 (338)
Q Consensus 84 ~a~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~ 162 (338)
+|+... ..........++.|+.++.++++++++.+ +++|||+||.++|+ .....+++|+. +..|.+.
T Consensus 70 ~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~-~~~iv~~SS~~vyg--~~~~~~~~E~~---------~~~~~~~ 137 (313)
T 3ehe_A 70 IAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAG-VSRIVFTSTSTVYG--EAKVIPTPEDY---------PTHPISL 137 (313)
T ss_dssp CCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGGC--SCSSSSBCTTS---------CCCCCSH
T ss_pred CCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEeCchHHhC--cCCCCCCCCCC---------CCCCCCH
Confidence 998644 22334556889999999999999999988 88999999999998 44556778876 4557889
Q ss_pred HHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCC--CCCCCCCC-CccccHHHHHHHHH
Q 040253 163 YFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNE--AHYPIIKQ-GQFVHLDDLCSAHI 239 (338)
Q Consensus 163 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~i~v~D~a~~~~ 239 (338)
|+.+|.++|.+++.+++++|++++++||+++|||+........+.. ....+.. ..++.+.+ ++|+|++|+|++++
T Consensus 138 Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~ 215 (313)
T 3ehe_A 138 YGASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIM--KLKRNPEELEILGNGEQNKSYIYISDCVDAML 215 (313)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHH--HHHHCTTEEEESTTSCCEECCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHH--HHHcCCCceEEeCCCCeEEeEEEHHHHHHHHH
Confidence 9999999999999999999999999999999999865422111111 1112222 13444433 78999999999999
Q ss_pred HhhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCCCC----CccccccccccchhhhhhcCCcccccHHHHHHH
Q 040253 240 FLFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFNVPTEFE----DVDENMKNMLFSSKKLTDLGFKFKYSLDDMFTG 314 (338)
Q Consensus 240 ~~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~i~~ 314 (338)
.+++....+++||+ +++++|+.|+++.+.+.+|.. .+.... .++.......+|++++++|||+|+++++++|++
T Consensus 216 ~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~ 294 (313)
T 3ehe_A 216 FGLRGDERVNIFNIGSEDQIKVKRIAEIVCEELGLS-PRFRFTGGDRGWKGDVPVMLLSIEKLKRLGWKPRYNSEEAVRM 294 (313)
T ss_dssp HHTTCCSSEEEEECCCSCCEEHHHHHHHHHHHTTCC-CEEEEC------------CCBCCHHHHHHTCCCSCCHHHHHHH
T ss_pred HHhccCCCCceEEECCCCCeeHHHHHHHHHHHhCCC-CceEECCCccCCccccceeccCHHHHHHcCCCCCCCHHHHHHH
Confidence 99996666779998 467899999999999999752 222111 123344556789999988999999999999999
Q ss_pred HHHHHHHcCC
Q 040253 315 AVDTCRAKGL 324 (338)
Q Consensus 315 ~~~~~~~~~~ 324 (338)
+++|+++++.
T Consensus 295 ~~~~~~~~~~ 304 (313)
T 3ehe_A 295 AVRDLVEDLD 304 (313)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHhCcc
Confidence 9999987654
No 7
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=100.00 E-value=8.5e-47 Score=338.01 Aligned_cols=307 Identities=15% Similarity=0.187 Sum_probs=231.9
Q ss_pred CCCCcEEEEeCCchhhHHHHHHHHHHCC--CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC--
Q 040253 2 GSIAETVCVTGASGFIGSWLIMRLLERG--YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG-- 77 (338)
Q Consensus 2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 77 (338)
++++|+|||||||||||++++++|+++| ++|++++|...... ...+... ...++++++.+|++|.+.+.+++++
T Consensus 21 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~-~~~l~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 98 (346)
T 4egb_A 21 QSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGN-LNNVKSI-QDHPNYYFVKGEIQNGELLEHVIKERD 98 (346)
T ss_dssp ---CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCC-GGGGTTT-TTCTTEEEEECCTTCHHHHHHHHHHHT
T ss_pred ccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccc-hhhhhhh-ccCCCeEEEEcCCCCHHHHHHHHhhcC
Confidence 3457899999999999999999999999 67877777542211 1111111 1125899999999999999999986
Q ss_pred ccEEEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhc
Q 040253 78 CTGVFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSV 156 (338)
Q Consensus 78 ~d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~ 156 (338)
+|+|||+|+..... ........++.|+.++.++++++++.+ +++|||+||.++|+... ...+++|++ +
T Consensus 99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~~v~~SS~~vy~~~~-~~~~~~E~~---------~ 167 (346)
T 4egb_A 99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYP-HIKLVQVSTDEVYGSLG-KTGRFTEET---------P 167 (346)
T ss_dssp CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHST-TSEEEEEEEGGGGCCCC-SSCCBCTTS---------C
T ss_pred CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEeCchHHhCCCC-cCCCcCCCC---------C
Confidence 99999999976522 234455789999999999999999998 89999999999998322 356788887 4
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhh-hhcccCCCC-CCCCCC-CccccHHH
Q 040253 157 KMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITAL-SPITRNEAH-YPIIKQ-GQFVHLDD 233 (338)
Q Consensus 157 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~-~~~i~v~D 233 (338)
..|.+.|+.+|.++|.+++.+++++|++++++||+++|||+..... .+..++ ....+.... ++.+.. ++|+|++|
T Consensus 168 ~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 245 (346)
T 4egb_A 168 LAPNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEK--LIPLMVTNALEGKKLPLYGDGLNVRDWLHVTD 245 (346)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTS--HHHHHHHHHHTTCCCEEETTSCCEECEEEHHH
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccc--hHHHHHHHHHcCCCceeeCCCCeEEeeEEHHH
Confidence 5688899999999999999999988999999999999999865431 121112 222333332 333333 78999999
Q ss_pred HHHHHHHhhcCCCCCCceEEe-cCCCCHHHHHHHHHHhCCCCCCCCC-CCCccccccccccchhhhhh-cCCcccccHHH
Q 040253 234 LCSAHIFLFEHPNAKGRYICS-SHPATILELAKFLREKYPEFNVPTE-FEDVDENMKNMLFSSKKLTD-LGFKFKYSLDD 310 (338)
Q Consensus 234 ~a~~~~~~l~~~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-lg~~~~~~~~~ 310 (338)
+|++++.+++++..+++||++ ++++|+.|+++.+.+.+|....... ....+.......+|++++++ |||+|++++++
T Consensus 246 va~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e 325 (346)
T 4egb_A 246 HCSAIDVVLHKGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTDRLGHDRRYAINAEKMKNEFDWEPKYTFEQ 325 (346)
T ss_dssp HHHHHHHHHHHCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC--CCCSCCCBCCHHHHHHHCCCCCCCHHH
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCCCCCCcceeeccHHHHHHHcCCCCCCCHHH
Confidence 999999999987777799985 5779999999999999885321121 12223344556789999986 99999999999
Q ss_pred HHHHHHHHHHHcC
Q 040253 311 MFTGAVDTCRAKG 323 (338)
Q Consensus 311 ~i~~~~~~~~~~~ 323 (338)
+|+++++|+++++
T Consensus 326 ~l~~~~~~~~~~~ 338 (346)
T 4egb_A 326 GLQETVQWYEKNE 338 (346)
T ss_dssp HHHHHHHHHHHCH
T ss_pred HHHHHHHHHHhhh
Confidence 9999999998764
No 8
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=100.00 E-value=1.4e-46 Score=331.81 Aligned_cols=293 Identities=18% Similarity=0.202 Sum_probs=228.7
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEec
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHLA 85 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 85 (338)
|+|||||||||||++++++|+++|++|++++|++....... ..+++++.+|+.|.+ +.+++++ |+|||+|
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A 70 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV--------NPSAELHVRDLKDYS-WGAGIKG-DVVFHFA 70 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS--------CTTSEEECCCTTSTT-TTTTCCC-SEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc--------CCCceEEECccccHH-HHhhcCC-CEEEECC
Confidence 58999999999999999999999999999999765432211 157899999999999 8888888 9999999
Q ss_pred ccCC-CCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHH
Q 040253 86 TPMD-FESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYF 164 (338)
Q Consensus 86 ~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~ 164 (338)
+... ..........++.|+.++.++++++++.+ +++|||+||.++|+ .....+++|+. +..|.+.|+
T Consensus 71 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~vyg--~~~~~~~~e~~---------~~~p~~~Y~ 138 (312)
T 3ko8_A 71 ANPEVRLSTTEPIVHFNENVVATFNVLEWARQTG-VRTVVFASSSTVYG--DADVIPTPEEE---------PYKPISVYG 138 (312)
T ss_dssp SSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGC--SCSSSSBCTTS---------CCCCCSHHH
T ss_pred CCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeCcHHHhC--CCCCCCCCCCC---------CCCCCChHH
Confidence 9643 22233445788999999999999999988 88999999999998 44556788876 456788999
Q ss_pred HHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCC--CCCCCCCC-CccccHHHHHHHHHHh
Q 040253 165 VSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNE--AHYPIIKQ-GQFVHLDDLCSAHIFL 241 (338)
Q Consensus 165 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~i~v~D~a~~~~~~ 241 (338)
.+|.++|.+++.+++++|++++++||+++|||+........+.. ....+.. ..++.+.. ++++|++|+|++++.+
T Consensus 139 ~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~ 216 (312)
T 3ko8_A 139 AAKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIM--KLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAA 216 (312)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHH--HHHHCTTEEEEC----CEECEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHH--HHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHH
Confidence 99999999999999989999999999999999865432211111 1112222 13333333 7899999999999999
Q ss_pred hcC----CCCCCceEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC-C------Cccccccccccchhhhhh-cCCcccccH
Q 040253 242 FEH----PNAKGRYICS-SHPATILELAKFLREKYPEFNVPTEF-E------DVDENMKNMLFSSKKLTD-LGFKFKYSL 308 (338)
Q Consensus 242 l~~----~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~-lg~~~~~~~ 308 (338)
+++ ...+++||++ ++++|+.|+++.+.+.+|... +... + .++.......+|++++++ |||+|++++
T Consensus 217 ~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~ 295 (312)
T 3ko8_A 217 WKKFEEMDAPFLALNVGNVDAVRVLDIAQIVAEVLGLRP-EIRLVPSTPDGRGWPGDVKYMTLAVTKLMKLTGWRPTMTS 295 (312)
T ss_dssp HHHHHHSCCSEEEEEESCSSCEEHHHHHHHHHHHHTCCC-EEEEC----------CCCSEECBCCHHHHHHHCCCCSSCH
T ss_pred HHhccccCCCCcEEEEcCCCceeHHHHHHHHHHHhCCCC-ceeecCccccccCCCCCccccccCHHHHHHHhCCCCCCCH
Confidence 987 3446689985 688999999999999987422 1111 1 123445567899999966 999999999
Q ss_pred HHHHHHHHHHHHHcC
Q 040253 309 DDMFTGAVDTCRAKG 323 (338)
Q Consensus 309 ~~~i~~~~~~~~~~~ 323 (338)
+++|+++++|+++++
T Consensus 296 ~~~l~~~~~~~~~~~ 310 (312)
T 3ko8_A 296 AEAVKKTAEDLAKEL 310 (312)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999999875
No 9
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=100.00 E-value=4.6e-46 Score=332.55 Aligned_cols=308 Identities=19% Similarity=0.240 Sum_probs=235.4
Q ss_pred CCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHH-HHHhcCCCCCCcEEEEecccCCCCCchhhhC--Cc
Q 040253 2 GSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKV-KHLLELPKASTHLTLWKADLAEEGNFDEPIR--GC 78 (338)
Q Consensus 2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~ 78 (338)
++++|+||||||+||||++++++|+++|++|++++|+....... ..+.... ..+++++.+|++|++++.++++ ++
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~~ 79 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKIT--GKTPAFHETDVSDERALARIFDAHPI 79 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHH--SCCCEEECCCTTCHHHHHHHHHHSCC
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhc--CCCceEEEeecCCHHHHHHHHhccCC
Confidence 34578999999999999999999999999999999976543322 1111100 1478999999999999999998 89
Q ss_pred cEEEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhcc
Q 040253 79 TGVFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVK 157 (338)
Q Consensus 79 d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~ 157 (338)
|+|||+|+..... ......+.++.|+.++.++++++++.+ +++|||+||.++|+ .....+++|+. +.
T Consensus 80 d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g--~~~~~~~~e~~---------~~ 147 (341)
T 3enk_A 80 TAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERA-VKRIVFSSSATVYG--VPERSPIDETF---------PL 147 (341)
T ss_dssp CEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGBC--SCSSSSBCTTS---------CC
T ss_pred cEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEecceEec--CCCCCCCCCCC---------CC
Confidence 9999999865411 112234778999999999999999988 88999999999997 45566788887 44
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHcC-ccEEEEcCCceeCCCCCCCC-------ChhHH-HhhhhcccCCCC---CC----
Q 040253 158 MTGWMYFVSKTLAEQAAWKFAEENN-IDFISIIPSLVVGPFLTSSM-------PPSLI-TALSPITRNEAH---YP---- 221 (338)
Q Consensus 158 ~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~ilRp~~v~G~~~~~~~-------~~~~~-~~~~~~~~~~~~---~~---- 221 (338)
.|.+.|+.+|.++|.+++.++.+++ ++++++||+++|||+..... ...+. .......+.... ++
T Consensus 148 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 227 (341)
T 3enk_A 148 SATNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYP 227 (341)
T ss_dssp BCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSS
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccC
Confidence 5788999999999999999998886 99999999999999653211 11121 111212222111 11
Q ss_pred --CCCC-CccccHHHHHHHHHHhhcC---CCCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCC-CCCccccccccccc
Q 040253 222 --IIKQ-GQFVHLDDLCSAHIFLFEH---PNAKGRYIC-SSHPATILELAKFLREKYPEFNVPTE-FEDVDENMKNMLFS 293 (338)
Q Consensus 222 --~~~~-~~~i~v~D~a~~~~~~l~~---~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~ 293 (338)
.+.+ ++|+|++|+|++++.++++ ...+++||+ +++++|+.|+++.+.+.+|. +.+.. ....+........|
T Consensus 228 ~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d 306 (341)
T 3enk_A 228 TPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGR-AVPYELVARRPGDVAECYAN 306 (341)
T ss_dssp STTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCS-CCCEEEECCCTTCCSEECBC
T ss_pred CCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCC-CcceeeCCCCCCCccccccC
Confidence 3333 7899999999999999986 245678998 56889999999999999875 33322 22234455567789
Q ss_pred hhhhhh-cCCcccccHHHHHHHHHHHHHHcCC
Q 040253 294 SKKLTD-LGFKFKYSLDDMFTGAVDTCRAKGL 324 (338)
Q Consensus 294 ~~~~~~-lg~~~~~~~~~~i~~~~~~~~~~~~ 324 (338)
++++++ |||+|+++++++|+++++|++++..
T Consensus 307 ~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~ 338 (341)
T 3enk_A 307 PAAAAETIGWKAERDLERMCADHWRWQENNPR 338 (341)
T ss_dssp CHHHHHHHCCCCCCCHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHcCCCCCCCHHHHHHHHHHHHHhcCc
Confidence 999986 9999999999999999999998753
No 10
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=100.00 E-value=3e-45 Score=328.12 Aligned_cols=292 Identities=20% Similarity=0.250 Sum_probs=231.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
.+|+|||||||||||++++++|+++|++|++++|++.. .+++++.+|++|.+++.++++++|+|||
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~--------------~~~~~~~~Dl~d~~~~~~~~~~~d~vih 83 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG--------------TGGEEVVGSLEDGQALSDAIMGVSAVLH 83 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS--------------SCCSEEESCTTCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC--------------CCccEEecCcCCHHHHHHHHhCCCEEEE
Confidence 36899999999999999999999999999999998654 3678999999999999999999999999
Q ss_pred ecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchH
Q 040253 84 LATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 163 (338)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y 163 (338)
+|+........ ....++.|+.++.++++++++.+ +++|||+||.++|+.......+++|++ +..|.+.|
T Consensus 84 ~A~~~~~~~~~-~~~~~~~nv~~~~~ll~a~~~~~-~~~~V~~SS~~vyg~~~~~~~~~~E~~---------~~~~~~~Y 152 (347)
T 4id9_A 84 LGAFMSWAPAD-RDRMFAVNVEGTRRLLDAASAAG-VRRFVFASSGEVYPENRPEFLPVTEDH---------PLCPNSPY 152 (347)
T ss_dssp CCCCCCSSGGG-HHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGTTTTSCSSSSBCTTS---------CCCCCSHH
T ss_pred CCcccCcchhh-HHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHHhCCCCCCCCCcCCCC---------CCCCCChH
Confidence 99976543222 25789999999999999999988 899999999999984335566788887 45678899
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEcCCcee-------------CCCCCCC---------CChhHHHhh-hhcccCCC-C
Q 040253 164 FVSKTLAEQAAWKFAEENNIDFISIIPSLVV-------------GPFLTSS---------MPPSLITAL-SPITRNEA-H 219 (338)
Q Consensus 164 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~-------------G~~~~~~---------~~~~~~~~~-~~~~~~~~-~ 219 (338)
+.+|.++|.+++.++++++++++++||+++| ||+.... ....+..++ ....+.+. .
T Consensus 153 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (347)
T 4id9_A 153 GLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHI 232 (347)
T ss_dssp HHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEE
T ss_pred HHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEE
Confidence 9999999999999999999999999999999 7653211 011122222 22233332 2
Q ss_pred CCCCC-CCcc----ccHHHHHHHHHHhhcCC-CCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCCCCCcccccccccc
Q 040253 220 YPIIK-QGQF----VHLDDLCSAHIFLFEHP-NAKGRYIC-SSHPATILELAKFLREKYPEFNVPTEFEDVDENMKNMLF 292 (338)
Q Consensus 220 ~~~~~-~~~~----i~v~D~a~~~~~~l~~~-~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (338)
++.+. .++| +|++|+|++++.+++++ ..+++||+ +++++|+.|+++.+.+.+|.. .+. ...+.......+
T Consensus 233 ~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~--~~~p~~~~~~~~ 309 (347)
T 4id9_A 233 LARNENGRPFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLP-IVT--VDFPGDGVYYHT 309 (347)
T ss_dssp EEECTTCCBCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCC-EEE--EECSSCCCBCCB
T ss_pred eCCCCcccCCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCC-Cce--eeCCCccccccc
Confidence 32332 2678 99999999999999987 45678998 568899999999999998752 221 112223336778
Q ss_pred chhhhhh-cCCcccccHHHHHHHHHHHHHHcC
Q 040253 293 SSKKLTD-LGFKFKYSLDDMFTGAVDTCRAKG 323 (338)
Q Consensus 293 ~~~~~~~-lg~~~~~~~~~~i~~~~~~~~~~~ 323 (338)
|++++++ |||+|+++++++|+++++|++++.
T Consensus 310 d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~~ 341 (347)
T 4id9_A 310 SNERIRNTLGFEAEWTMDRMLEEAATARRQRL 341 (347)
T ss_dssp CCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhh
Confidence 9999987 999999999999999999998764
No 11
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=100.00 E-value=1.8e-44 Score=320.81 Aligned_cols=298 Identities=16% Similarity=0.269 Sum_probs=228.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC--CccEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--GCTGVF 82 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi 82 (338)
||+||||||+||||++++++|+++|++|++++|+...... .+. .+++++.+|++|.+++.++++ ++|+||
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~---~~~~~~~~D~~~~~~~~~~~~~~~~d~vi 72 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED-----AIT---EGAKFYNGDLRDKAFLRDVFTQENIEAVM 72 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG-----GSC---TTSEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh-----hcC---CCcEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence 4799999999999999999999999999999997543221 111 368899999999999999998 899999
Q ss_pred EecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCc
Q 040253 83 HLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGW 161 (338)
Q Consensus 83 ~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~ 161 (338)
|+|+..... ........++.|+.++.++++++++.+ +++|||+||.++|+ .....+++|++ +..|.+
T Consensus 73 h~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~--~~~~~~~~E~~---------~~~~~~ 140 (330)
T 2c20_A 73 HFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFK-VDKFIFSSTAATYG--EVDVDLITEET---------MTNPTN 140 (330)
T ss_dssp ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGGC--SCSSSSBCTTS---------CCCCSS
T ss_pred ECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcC-CCEEEEeCCceeeC--CCCCCCCCcCC---------CCCCCC
Confidence 999965421 112345788999999999999999988 89999999999997 44456788887 445778
Q ss_pred hHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCC-------ChhHHHhhhhcccCCC---CC------CCCCC
Q 040253 162 MYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSM-------PPSLITALSPITRNEA---HY------PIIKQ 225 (338)
Q Consensus 162 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-------~~~~~~~~~~~~~~~~---~~------~~~~~ 225 (338)
.|+.+|.++|.+++.+++++|++++++||+++|||+..+.. ...+........+... .+ +.+..
T Consensus 141 ~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 220 (330)
T 2c20_A 141 TYGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTC 220 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSC
T ss_pred hHHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCce
Confidence 99999999999999999888999999999999999743211 1122222221222211 11 12322
Q ss_pred -CccccHHHHHHHHHHhhcCCC---CCCceEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC-CCccccccccccchhhhhh
Q 040253 226 -GQFVHLDDLCSAHIFLFEHPN---AKGRYICS-SHPATILELAKFLREKYPEFNVPTEF-EDVDENMKNMLFSSKKLTD 299 (338)
Q Consensus 226 -~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 299 (338)
++|+|++|+|++++.+++++. .+++||++ ++++|+.|+++.+.+.+|. +.+... ...+.......+|++++++
T Consensus 221 ~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~ 299 (330)
T 2c20_A 221 IRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNH-EIPAEVAPRRAGDPARLVASSQKAKE 299 (330)
T ss_dssp EECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTS-CCCEEEECCCSSCCSEECBCCHHHHH
T ss_pred eEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCC-CCceeeCCCCCCcccccccCHHHHHH
Confidence 689999999999999997643 25689984 6889999999999999874 333221 2223334567789999986
Q ss_pred -cCCcccc-cHHHHHHHHHHHHHHcC
Q 040253 300 -LGFKFKY-SLDDMFTGAVDTCRAKG 323 (338)
Q Consensus 300 -lg~~~~~-~~~~~i~~~~~~~~~~~ 323 (338)
|||+|++ +++++|+++++|++++.
T Consensus 300 ~lG~~p~~~~l~~~l~~~~~~~~~~~ 325 (330)
T 2c20_A 300 KLGWDPRYVNVKTIIEHAWNWHQKQP 325 (330)
T ss_dssp HHCCCCSCCCHHHHHHHHHHHHHHCS
T ss_pred HhCCCCccCCHHHHHHHHHHHHHHhh
Confidence 9999999 89999999999998753
No 12
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=100.00 E-value=3.4e-44 Score=321.84 Aligned_cols=307 Identities=17% Similarity=0.155 Sum_probs=231.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc-HHHHHHHhcCCC--CCCcEEEEecccCCCCCchhhhCCccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN-KKKVKHLLELPK--ASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
.+|+||||||+||||++++++|+++|++|++++|+... ...+..+..... ..++++++.+|++|.+++.++++++|+
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 105 (352)
T 1sb8_A 26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 105 (352)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence 46899999999999999999999999999999997642 222222111000 014789999999999999999999999
Q ss_pred EEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCC
Q 040253 81 VFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMT 159 (338)
Q Consensus 81 vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p 159 (338)
|||+|+..... ........++.|+.++.++++++.+.+ +++|||+||.++|+ .....+++|++ +..|
T Consensus 106 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~--~~~~~~~~E~~---------~~~~ 173 (352)
T 1sb8_A 106 VLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAK-VQSFTYAASSSTYG--DHPGLPKVEDT---------IGKP 173 (352)
T ss_dssp EEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGT--TCCCSSBCTTC---------CCCC
T ss_pred EEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHhcC--CCCCCCCCCCC---------CCCC
Confidence 99999964311 112344778999999999999999988 89999999999997 33445778887 4457
Q ss_pred CchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCC--ChhHHHhh-hhcccCCC-CCCCCCC-CccccHHHH
Q 040253 160 GWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSM--PPSLITAL-SPITRNEA-HYPIIKQ-GQFVHLDDL 234 (338)
Q Consensus 160 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~-~~~~~~~~-~~~~~~~-~~~i~v~D~ 234 (338)
.+.|+.+|.++|.+++.+++++|++++++||+.+|||+..... ...+..++ ....+.+. .++.+.. ++|+|++|+
T Consensus 174 ~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dv 253 (352)
T 1sb8_A 174 LSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENT 253 (352)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHH
Confidence 8899999999999999998888999999999999999865431 11121111 11223332 2333333 689999999
Q ss_pred HHHHHHhhcCC--CCCCceEE-ecCCCCHHHHHHHHHHhC---CCCCC--CCCCCCccccccccccchhhhhh-cCCccc
Q 040253 235 CSAHIFLFEHP--NAKGRYIC-SSHPATILELAKFLREKY---PEFNV--PTEFEDVDENMKNMLFSSKKLTD-LGFKFK 305 (338)
Q Consensus 235 a~~~~~~l~~~--~~~~~~~~-~~~~~t~~e~~~~i~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~ 305 (338)
|++++.++... ..+++||+ +++++|+.|+++.+.+.+ |.... +......+.......+|++++++ |||+|+
T Consensus 254 a~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~ 333 (352)
T 1sb8_A 254 VQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREGDVRHSLADISKAAKLLGYAPK 333 (352)
T ss_dssp HHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTTCCSBCCBCCHHHHHHTCCCCC
T ss_pred HHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCCceecCCCccchhhccCCHHHHHHHhCCCCC
Confidence 99999998762 34668998 468899999999999998 64211 11111122334556789999987 999999
Q ss_pred ccHHHHHHHHHHHHHHc
Q 040253 306 YSLDDMFTGAVDTCRAK 322 (338)
Q Consensus 306 ~~~~~~i~~~~~~~~~~ 322 (338)
++++++|+++++|++++
T Consensus 334 ~~~~e~l~~~~~~~~~~ 350 (352)
T 1sb8_A 334 YDVSAGVALAMPWYIMF 350 (352)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999999864
No 13
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=100.00 E-value=3.2e-45 Score=330.99 Aligned_cols=304 Identities=19% Similarity=0.284 Sum_probs=229.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHC-CCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccC-CCCCchhhhCCccEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLER-GYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLA-EEGNFDEPIRGCTGV 81 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-d~~~~~~~~~~~d~v 81 (338)
+||+|||||||||||++|+++|+++ |++|++++|+......+.. .++++++.+|++ |.+.+.++++++|+|
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~-------~~~v~~~~~Dl~~d~~~~~~~~~~~d~V 95 (372)
T 3slg_A 23 KAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVK-------HERMHFFEGDITINKEWVEYHVKKCDVI 95 (372)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGG-------STTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhcc-------CCCeEEEeCccCCCHHHHHHHhccCCEE
Confidence 4689999999999999999999998 9999999998765433211 158999999999 899999999999999
Q ss_pred EEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCC
Q 040253 82 FHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTG 160 (338)
Q Consensus 82 i~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~ 160 (338)
||+|+..... ......+.++.|+.++.+++++|++.+ ++|||+||.++|+ .....+++|+++... ..+...|.
T Consensus 96 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~--~~~v~~SS~~vyg--~~~~~~~~e~~~~~~--~~p~~~p~ 169 (372)
T 3slg_A 96 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG--KHLVFPSTSEVYG--MCADEQFDPDASALT--YGPINKPR 169 (372)
T ss_dssp EECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT--CEEEEECCGGGGB--SCCCSSBCTTTCCEE--ECCTTCTT
T ss_pred EEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC--CcEEEeCcHHHhC--CCCCCCCCccccccc--cCCCCCCC
Confidence 9999965521 112334778999999999999999887 7999999999998 444566777763311 01122577
Q ss_pred chHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCC------ChhHHHhhh-hcccCCCCC-CCCCC-CccccH
Q 040253 161 WMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSM------PPSLITALS-PITRNEAHY-PIIKQ-GQFVHL 231 (338)
Q Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~------~~~~~~~~~-~~~~~~~~~-~~~~~-~~~i~v 231 (338)
+.|+.+|+++|.+++.++++ |++++++||+++|||+..... ...+..++. ...+....+ +.+.. ++|+|+
T Consensus 170 ~~Y~~sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 248 (372)
T 3slg_A 170 WIYACSKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYV 248 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEH
T ss_pred CcHHHHHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEH
Confidence 89999999999999999888 999999999999999865311 112222222 223443322 33333 689999
Q ss_pred HHHHHHHHHhhcCCC---CCCceEEec--CCCCHHHHHHHHHHhCCCCCCCCCC-------C---------Ccccccccc
Q 040253 232 DDLCSAHIFLFEHPN---AKGRYICSS--HPATILELAKFLREKYPEFNVPTEF-------E---------DVDENMKNM 290 (338)
Q Consensus 232 ~D~a~~~~~~l~~~~---~~~~~~~~~--~~~t~~e~~~~i~~~~~~~~~~~~~-------~---------~~~~~~~~~ 290 (338)
+|+|++++.+++++. .+++||+++ +++|+.|+++.+.+.+|.. .+... . .........
T Consensus 249 ~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (372)
T 3slg_A 249 DDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEF-PEYADSAKRVKLVETTSGAYYGNGYQDVQNR 327 (372)
T ss_dssp HHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHC-TTTHHHHHTCCEEEC-------------CCC
T ss_pred HHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCC-cccccccccceeeeccccccccCCcccccee
Confidence 999999999999874 467899865 5899999999999988642 11100 0 001234456
Q ss_pred ccchhhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 040253 291 LFSSKKLTD-LGFKFKYSLDDMFTGAVDTCRAK 322 (338)
Q Consensus 291 ~~~~~~~~~-lg~~~~~~~~~~i~~~~~~~~~~ 322 (338)
..|++++++ |||+|+++++++|+++++|++++
T Consensus 328 ~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~ 360 (372)
T 3slg_A 328 VPKIENTMQELGWAPQFTFDDALRQIFEAYRGH 360 (372)
T ss_dssp CBCCHHHHHHHTCCCCCCHHHHHHHHHHHHTTC
T ss_pred ecCHHHHHHHcCCCCCCCHHHHHHHHHHHHHHH
Confidence 788999987 99999999999999999999764
No 14
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=100.00 E-value=6.1e-44 Score=319.71 Aligned_cols=303 Identities=15% Similarity=0.189 Sum_probs=228.3
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHC--CCeEEEEEcCCC--cHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLER--GYAVRATVRDPD--NKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 76 (338)
|+. ||+||||||+||||++++++|+++ |++|++++|+.. ....+..+. .++++++.+|++|.+++.++++
T Consensus 1 Ms~-m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~~~~~~~ 74 (348)
T 1oc2_A 1 MSQ-FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAIL-----GDRVELVVGDIADAELVDKLAA 74 (348)
T ss_dssp --C-CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGC-----SSSEEEEECCTTCHHHHHHHHT
T ss_pred CCc-CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhc-----cCCeEEEECCCCCHHHHHHHhh
Confidence 554 689999999999999999999998 899999999653 122111111 1578999999999999999999
Q ss_pred CccEEEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCC----------CCCCcCCC
Q 040253 77 GCTGVFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEH----------RKPVYDET 145 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~----------~~~~~~e~ 145 (338)
++|+|||+|+..... .....+..++.|+.++.++++++...+ + +|||+||.++|+.... ...+++|+
T Consensus 75 ~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~ 152 (348)
T 1oc2_A 75 KADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYD-I-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAE 152 (348)
T ss_dssp TCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTT
T ss_pred cCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhC-C-eEEEecccceeCCCcccccccccccccCCCcCCC
Confidence 999999999965411 112335788999999999999999988 6 9999999999973321 01466776
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhh-hhcccCCCC-CCCC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITAL-SPITRNEAH-YPII 223 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~ 223 (338)
+ +..|.+.|+.+|..+|.+++.+++++|++++++||+.+|||+.... ..+...+ ....+.... ++.+
T Consensus 153 ~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 221 (348)
T 1oc2_A 153 T---------NYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE--KFIPRQITNILAGIKPKLYGEG 221 (348)
T ss_dssp S---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT--SHHHHHHHHHHHTCCCEEETTS
T ss_pred C---------CCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc--chHHHHHHHHHcCCCceEecCC
Confidence 6 4457789999999999999999988899999999999999986432 1111111 112233322 2333
Q ss_pred CC-CccccHHHHHHHHHHhhcCCCCCCceEEe-cCCCCHHHHHHHHHHhCCCCCCCCC-CCCccccccccccchhhhhh-
Q 040253 224 KQ-GQFVHLDDLCSAHIFLFEHPNAKGRYICS-SHPATILELAKFLREKYPEFNVPTE-FEDVDENMKNMLFSSKKLTD- 299 (338)
Q Consensus 224 ~~-~~~i~v~D~a~~~~~~l~~~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 299 (338)
.. ++++|++|+|++++.+++.+..+++||++ +.++|+.|+++.+.+.+|....... ....+.......+|++++++
T Consensus 222 ~~~~~~i~v~Dva~~~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 301 (348)
T 1oc2_A 222 KNVRDWIHTNDHSTGVWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDRAGHDLRYAIDASKLRDE 301 (348)
T ss_dssp CCEEECEEHHHHHHHHHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCCTTCCCBCCBCCHHHHHH
T ss_pred CceEeeEEHHHHHHHHHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCCCCCcccccccCHHHHHHH
Confidence 33 68999999999999999876566789985 5789999999999999885321111 11122233445689999987
Q ss_pred cCCccccc-HHHHHHHHHHHHHHc
Q 040253 300 LGFKFKYS-LDDMFTGAVDTCRAK 322 (338)
Q Consensus 300 lg~~~~~~-~~~~i~~~~~~~~~~ 322 (338)
|||+|+++ ++++|+++++|++++
T Consensus 302 lG~~p~~~~~~~~l~~~~~~~~~~ 325 (348)
T 1oc2_A 302 LGWTPQFTDFSEGLEETIQWYTDN 325 (348)
T ss_dssp HCCCCSCCCHHHHHHHHHHHHHHT
T ss_pred cCCCCCCCcHHHHHHHHHHHHHHh
Confidence 99999998 999999999999875
No 15
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=100.00 E-value=2.9e-44 Score=323.48 Aligned_cols=301 Identities=15% Similarity=0.137 Sum_probs=226.5
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHH--CCCeEEEEEcCCCcHHHHHHHh----cC-CCCCCcEEEEecccCCCCCchhh-
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLE--RGYAVRATVRDPDNKKKVKHLL----EL-PKASTHLTLWKADLAEEGNFDEP- 74 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~~~~~~~~----~~-~~~~~~~~~~~~Dl~d~~~~~~~- 74 (338)
..+|+||||||+||||++++++|++ .|++|++++|+........... .. .....+++++.+|++|++++.++
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 87 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLE 87 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHT
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhh
Confidence 3468999999999999999999999 8999999999765211100000 00 00114679999999999999998
Q ss_pred hCCccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhh
Q 040253 75 IRGCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVR 154 (338)
Q Consensus 75 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~ 154 (338)
..++|+|||+|+..... .......+++|+.++.++++++++.+ ++ |||+||.++|+ .... +++|++
T Consensus 88 ~~~~D~vih~A~~~~~~-~~~~~~~~~~Nv~gt~~ll~aa~~~~-~~-~V~~SS~~vyg--~~~~-~~~E~~-------- 153 (362)
T 3sxp_A 88 KLHFDYLFHQAAVSDTT-MLNQELVMKTNYQAFLNLLEIARSKK-AK-VIYASSAGVYG--NTKA-PNVVGK-------- 153 (362)
T ss_dssp TSCCSEEEECCCCCGGG-CCCHHHHHHHHTHHHHHHHHHHHHTT-CE-EEEEEEGGGGC--SCCS-SBCTTS--------
T ss_pred ccCCCEEEECCccCCcc-ccCHHHHHHHHHHHHHHHHHHHHHcC-Cc-EEEeCcHHHhC--CCCC-CCCCCC--------
Confidence 77999999999965542 34456889999999999999999988 66 99999999997 3333 788887
Q ss_pred hccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCC--hhHHHhh-hhcccCCC-CCCCCCC-Cccc
Q 040253 155 SVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMP--PSLITAL-SPITRNEA-HYPIIKQ-GQFV 229 (338)
Q Consensus 155 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~-~~~~~~~~-~~~~~~~-~~~i 229 (338)
+..|.+.|+.+|.++|.+++.++.+ ++++++||+++|||+...... ..+..+. ....+... .++.+.. ++|+
T Consensus 154 -~~~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i 230 (362)
T 3sxp_A 154 -NESPENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFV 230 (362)
T ss_dssp -CCCCSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECE
T ss_pred -CCCCCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccE
Confidence 5568889999999999999987765 899999999999998653210 1122222 12223332 2333333 7899
Q ss_pred cHHHHHHHHHHhhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCCCCC-c-cccccccccchhhhhh-cCCccc
Q 040253 230 HLDDLCSAHIFLFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFNVPTEFED-V-DENMKNMLFSSKKLTD-LGFKFK 305 (338)
Q Consensus 230 ~v~D~a~~~~~~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~-lg~~~~ 305 (338)
|++|+|++++.+++.+..+ +||+ ++.++|+.|+++.+.+.+| +.+..... . +.......+|++++++ |||+|+
T Consensus 231 ~v~Dva~ai~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g--~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~ 307 (362)
T 3sxp_A 231 YIEDVIQANVKAMKAQKSG-VYNVGYSQARSYNEIVSILKEHLG--DFKVTYIKNPYAFFQKHTQAHIEPTILDLDYTPL 307 (362)
T ss_dssp EHHHHHHHHHHHTTCSSCE-EEEESCSCEEEHHHHHHHHHHHHC--CCEEECCC-------CCCCBCCHHHHHHHCCCCC
T ss_pred EHHHHHHHHHHHHhcCCCC-EEEeCCCCCccHHHHHHHHHHHcC--CCceEECCCCCcCcccceecCHHHHHHHhCCCCC
Confidence 9999999999999987654 9998 5688999999999999998 33222221 1 3445567889999966 999999
Q ss_pred ccHHHHHHHHHHHHHHcC
Q 040253 306 YSLDDMFTGAVDTCRAKG 323 (338)
Q Consensus 306 ~~~~~~i~~~~~~~~~~~ 323 (338)
++++++|+++++|+++..
T Consensus 308 ~~l~e~l~~~~~~~~~~~ 325 (362)
T 3sxp_A 308 YDLESGIKDYLPHIHAIF 325 (362)
T ss_dssp CCHHHHHHHHHHHHTCC-
T ss_pred CCHHHHHHHHHHHHHHHh
Confidence 999999999999997653
No 16
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=100.00 E-value=1.4e-43 Score=320.81 Aligned_cols=304 Identities=16% Similarity=0.103 Sum_probs=230.5
Q ss_pred CCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEE
Q 040253 2 GSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGV 81 (338)
Q Consensus 2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 81 (338)
..+||+||||||+||||++++++|+++|++|++++|+........ ..+++++.+|++|.+++.++++++|+|
T Consensus 26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------~~~v~~~~~Dl~d~~~~~~~~~~~d~V 97 (379)
T 2c5a_A 26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED--------MFCDEFHLVDLRVMENCLKVTEGVDHV 97 (379)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG--------GTCSEEEECCTTSHHHHHHHHTTCSEE
T ss_pred cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc--------cCCceEEECCCCCHHHHHHHhCCCCEE
Confidence 345789999999999999999999999999999999765432110 146899999999999999999999999
Q ss_pred EEecccCCCCC--CCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCC---CCCCcCCCCCCchhhhhhc
Q 040253 82 FHLATPMDFES--KDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEH---RKPVYDETSWSDLDFVRSV 156 (338)
Q Consensus 82 i~~a~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~---~~~~~~e~~~~~~~~~~~~ 156 (338)
||+|+...... .......++.|+.++.++++++++.+ +++|||+||.++|+.... ...+++|+++. +
T Consensus 98 ih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~-------~ 169 (379)
T 2c5a_A 98 FNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAW-------P 169 (379)
T ss_dssp EECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS-------S
T ss_pred EECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeehheeCCCCCCCccCCCcCcccCC-------C
Confidence 99999654210 23455789999999999999999988 889999999999974321 11345555411 2
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCC--hhHHHhhh-hcccCC-C-CCCCCCC-Ccccc
Q 040253 157 KMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMP--PSLITALS-PITRNE-A-HYPIIKQ-GQFVH 230 (338)
Q Consensus 157 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~-~~~~~~-~-~~~~~~~-~~~i~ 230 (338)
..|.+.|+.+|..+|.+++.+++++|++++++||+++|||+...... ..+..++. ...+.. . .++.+.. ++++|
T Consensus 170 ~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~ 249 (379)
T 2c5a_A 170 AEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTF 249 (379)
T ss_dssp BCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEE
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEE
Confidence 34678999999999999999988889999999999999998654211 11211221 112332 1 2333333 78999
Q ss_pred HHHHHHHHHHhhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCCCCCccccccccccchhhhhh-cCCcccccH
Q 040253 231 LDDLCSAHIFLFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFNVPTEFEDVDENMKNMLFSSKKLTD-LGFKFKYSL 308 (338)
Q Consensus 231 v~D~a~~~~~~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~~~~~ 308 (338)
++|+|++++.+++++ .+++||+ +++++|+.|+++.+.+.+|. +.+....+.+.......+|++++++ |||+|++++
T Consensus 250 v~Dva~ai~~~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~p~~~~~~~~~~d~~k~~~~lG~~p~~~l 327 (379)
T 2c5a_A 250 IDECVEGVLRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEK-KLPIHHIPGPEGVRGRNSDNNLIKEKLGWAPNMRL 327 (379)
T ss_dssp HHHHHHHHHHHHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTC-CCCEEEECCCCCCSBCEECCHHHHHHHSCCCCCCH
T ss_pred HHHHHHHHHHHhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCC-CCceeeCCCCCCcccccCCHHHHHHHhCCCCCCCH
Confidence 999999999999876 5678988 45889999999999999874 2222111111223445688899887 999999999
Q ss_pred HHHHHHHHHHHHHcC
Q 040253 309 DDMFTGAVDTCRAKG 323 (338)
Q Consensus 309 ~~~i~~~~~~~~~~~ 323 (338)
+++|+++++|++++.
T Consensus 328 ~e~l~~~~~~~~~~~ 342 (379)
T 2c5a_A 328 KEGLRITYFWIKEQI 342 (379)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhH
Confidence 999999999998653
No 17
>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}
Probab=100.00 E-value=7.7e-44 Score=315.55 Aligned_cols=297 Identities=17% Similarity=0.204 Sum_probs=227.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC--ccEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG--CTGV 81 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~v 81 (338)
.+|+||||||+||||++++++|+++|++|++++|++.. .. .+++++.+|++|++++.+++++ +|+|
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-----------l~~~~~~~Dl~d~~~~~~~~~~~~~d~v 78 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-----------PNVEMISLDIMDSQRVKKVISDIKPDYI 78 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-----------TTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-----------ceeeEEECCCCCHHHHHHHHHhcCCCEE
Confidence 46899999999999999999999999999999997654 11 1578999999999999998875 9999
Q ss_pred EEecccCCC-CCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCC
Q 040253 82 FHLATPMDF-ESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTG 160 (338)
Q Consensus 82 i~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~ 160 (338)
||+|+.... ...+.....+++|+.++.+++++++..+.+++|||+||.++|+.......+++|++ +..|.
T Consensus 79 ih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~---------~~~~~ 149 (321)
T 2pk3_A 79 FHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEEN---------QLRPM 149 (321)
T ss_dssp EECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTS---------CCBCC
T ss_pred EEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCC---------CCCCC
Confidence 999997542 11234457899999999999999977522789999999999973211455778887 44577
Q ss_pred chHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCC-ChhHH-Hhhhhccc--CC-CCCCCCCC-CccccHHHH
Q 040253 161 WMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSM-PPSLI-TALSPITR--NE-AHYPIIKQ-GQFVHLDDL 234 (338)
Q Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~-~~~~~-~~~~~~~~--~~-~~~~~~~~-~~~i~v~D~ 234 (338)
+.|+.+|.++|.+++.+++++|++++++||+++|||+..... ...+. .......+ .. ..++.+.. ++++|++|+
T Consensus 150 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dv 229 (321)
T 2pk3_A 150 SPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDI 229 (321)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHH
Confidence 899999999999999998888999999999999999865421 11111 11110012 12 12333322 679999999
Q ss_pred HHHHHHhhcCCCCCCceEEe-cCCCCHHHHHHHHHHhCCCCCCCCC-CC--Cccccccccccchhhhhh-cCCcccccHH
Q 040253 235 CSAHIFLFEHPNAKGRYICS-SHPATILELAKFLREKYPEFNVPTE-FE--DVDENMKNMLFSSKKLTD-LGFKFKYSLD 309 (338)
Q Consensus 235 a~~~~~~l~~~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~-lg~~~~~~~~ 309 (338)
|++++.+++.+..+++||++ +.++|+.|+++.+.+.+|. +.+.. .+ ..+.......+|++++++ |||+|+++++
T Consensus 230 a~a~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~p~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~ 308 (321)
T 2pk3_A 230 VQAYWLLSQYGKTGDVYNVCSGIGTRIQDVLDLLLAMANV-KIDTELNPLQLRPSEVPTLIGSNKRLKDSTGWKPRIPLE 308 (321)
T ss_dssp HHHHHHHHHHCCTTCEEEESCSCEEEHHHHHHHHHHHSSS-CCEEEECGGGCCSSCCSBCCBCCHHHHHHHCCCCCSCHH
T ss_pred HHHHHHHHhCCCCCCeEEeCCCCCeeHHHHHHHHHHHhCC-CCceeeccccCCCcccchhccCHHHHHHHcCCCcCCCHH
Confidence 99999999877567799985 5789999999999999875 22211 11 112334567789999987 8999999999
Q ss_pred HHHHHHHHHHHHc
Q 040253 310 DMFTGAVDTCRAK 322 (338)
Q Consensus 310 ~~i~~~~~~~~~~ 322 (338)
++|+++++|++++
T Consensus 309 e~l~~~~~~~~~~ 321 (321)
T 2pk3_A 309 KSLFEILQSYRQA 321 (321)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999753
No 18
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=100.00 E-value=1.1e-44 Score=319.59 Aligned_cols=294 Identities=15% Similarity=0.170 Sum_probs=224.7
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHC--CCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC--CccE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLER--GYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--GCTG 80 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~ 80 (338)
+|+||||||+||||++++++|+++ |++|++++|++...... ++++++.+|++|.+++.++++ ++|+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~~~~~d~ 71 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVV----------NSGPFEVVNALDFNQIEHLVEVHKITD 71 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHH----------HSSCEEECCTTCHHHHHHHHHHTTCCE
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccccc----------CCCceEEecCCCHHHHHHHHhhcCCCE
Confidence 579999999999999999999998 89999999976653211 256889999999999999998 8999
Q ss_pred EEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCC
Q 040253 81 VFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTG 160 (338)
Q Consensus 81 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~ 160 (338)
|||+|+.............++.|+.++.++++++++.+ +++|||+||.++|+... ...+.+|++ +..|.
T Consensus 72 vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~~~~~~~-~~~~~~e~~---------~~~~~ 140 (312)
T 2yy7_A 72 IYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKK-IKKIFWPSSIAVFGPTT-PKENTPQYT---------IMEPS 140 (312)
T ss_dssp EEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTS-CSEEECCEEGGGCCTTS-CSSSBCSSC---------BCCCC
T ss_pred EEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcC-CCEEEEeccHHHhCCCC-CCCCccccC---------cCCCC
Confidence 99999864421122345789999999999999999988 88999999999997322 234566665 44578
Q ss_pred chHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCC--h-hHHHhhhhcc-cCCCCCCCC-CCCccccHHHHH
Q 040253 161 WMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMP--P-SLITALSPIT-RNEAHYPII-KQGQFVHLDDLC 235 (338)
Q Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~-~~~~~~~~~~-~~~~~~~~~-~~~~~i~v~D~a 235 (338)
+.|+.+|.++|.+++.+++++|++++++||+++|||...+... . ....+..... +....+..+ ..++|+|++|+|
T Consensus 141 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 220 (312)
T 2yy7_A 141 TVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAI 220 (312)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHH
Confidence 8999999999999999988889999999999999986533211 1 1111122122 222223333 337899999999
Q ss_pred HHHHHhhcCCCC----CCceEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCcccc---ccccccchhhhhh-cCCccccc
Q 040253 236 SAHIFLFEHPNA----KGRYICSSHPATILELAKFLREKYPEFNVPTEFEDVDEN---MKNMLFSSKKLTD-LGFKFKYS 307 (338)
Q Consensus 236 ~~~~~~l~~~~~----~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-lg~~~~~~ 307 (338)
++++.+++++.. +++||++++.+|+.|+++.+.+.+|...++.... .... .....+|++++++ |||+|+++
T Consensus 221 ~a~~~~~~~~~~~~~~~~~~ni~~~~~s~~e~~~~i~~~~~~~~i~~~~~-~~~~~~~~~~~~~d~~k~~~~lG~~p~~~ 299 (312)
T 2yy7_A 221 DATINIMKAPVEKIKIHSSYNLAAMSFTPTEIANEIKKHIPEFTITYEPD-FRQKIADSWPASIDDSQAREDWDWKHTFD 299 (312)
T ss_dssp HHHHHHHHSCGGGCCCSSCEECCSEEECHHHHHHHHHTTCTTCEEEECCC-THHHHHTTSCSSBCCHHHHHHHCCCCCCC
T ss_pred HHHHHHHhCcccccccCceEEeCCCccCHHHHHHHHHHHCCCCceEeccC-ccccccccccccCCHHHHHHHcCCCCCCC
Confidence 999999987653 3789997788999999999999988432222111 1111 1124678999987 99999999
Q ss_pred HHHHHHHHHHHHH
Q 040253 308 LDDMFTGAVDTCR 320 (338)
Q Consensus 308 ~~~~i~~~~~~~~ 320 (338)
++++|+++++|++
T Consensus 300 l~~~l~~~~~~~k 312 (312)
T 2yy7_A 300 LESMTKDMIEHLS 312 (312)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999974
No 19
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.2e-43 Score=315.26 Aligned_cols=295 Identities=18% Similarity=0.258 Sum_probs=222.3
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
+|+||||||+||||++++++|+++|++|++++|++.....+.. .+++++.+|++|.+++.++++++|+|||+
T Consensus 13 ~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~--------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 84 (342)
T 2x4g_A 13 HVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAY--------LEPECRVAEMLDHAGLERALRGLDGVIFS 84 (342)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGG--------GCCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhcc--------CCeEEEEecCCCHHHHHHHHcCCCEEEEC
Confidence 4699999999999999999999999999999998765433211 36899999999999999999999999999
Q ss_pred cccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCC----C
Q 040253 85 ATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMT----G 160 (338)
Q Consensus 85 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p----~ 160 (338)
|+..... .......++.|+.++.++++++.+.+ +++|||+||.++|+.......+ +|++ +..| .
T Consensus 85 a~~~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~-~E~~---------~~~p~~~~~ 152 (342)
T 2x4g_A 85 AGYYPSR-PRRWQEEVASALGQTNPFYAACLQAR-VPRILYVGSAYAMPRHPQGLPG-HEGL---------FYDSLPSGK 152 (342)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHT-CSCEEEECCGGGSCCCTTSSCB-CTTC---------CCSSCCTTS
T ss_pred CccCcCC-CCCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEECCHHhhCcCCCCCCC-CCCC---------CCCcccccc
Confidence 9965432 23445789999999999999999988 8899999999999733221133 6776 3345 7
Q ss_pred chHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCC-CCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHH
Q 040253 161 WMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFL-TSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHI 239 (338)
Q Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~ 239 (338)
+.|+.+|.++|.+++.++++ |++++++||+.+|||+. .......+... ..+....+ ....++++|++|+|++++
T Consensus 153 ~~Y~~sK~~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~i~v~Dva~~~~ 227 (342)
T 2x4g_A 153 SSYVLCKWALDEQAREQARN-GLPVVIGIPGMVLGELDIGPTTGRVITAI---GNGEMTHY-VAGQRNVIDAAEAGRGLL 227 (342)
T ss_dssp CHHHHHHHHHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCSTTHHHHHH---HTTCCCEE-ECCEEEEEEHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHhhc-CCcEEEEeCCceECCCCccccHHHHHHHH---HcCCCccc-cCCCcceeeHHHHHHHHH
Confidence 89999999999999999887 99999999999999986 32222222211 12333222 223368999999999999
Q ss_pred HhhcCCCCCCceEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCc-----------------------cc----ccccccc
Q 040253 240 FLFEHPNAKGRYICSSHPATILELAKFLREKYPEFNVPTEFEDV-----------------------DE----NMKNMLF 292 (338)
Q Consensus 240 ~~l~~~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~-----------------------~~----~~~~~~~ 292 (338)
.+++++..+++||+++..+|+.|+++.+.+.+|.. .+...+.. +. ......+
T Consensus 228 ~~~~~~~~g~~~~v~~~~~s~~e~~~~i~~~~g~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (342)
T 2x4g_A 228 MALERGRIGERYLLTGHNLEMADLTRRIAELLGQP-APQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFL 306 (342)
T ss_dssp HHHHHSCTTCEEEECCEEEEHHHHHHHHHHHHTCC-CCEEECHHHHHHHHHHHHC----------------CCTTCCCCB
T ss_pred HHHhCCCCCceEEEcCCcccHHHHHHHHHHHhCCC-CCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCccc
Confidence 99987666778998543399999999999988742 22111100 00 0134568
Q ss_pred chhhhhh-cCC-cccccHHHHHHHHHHHHHHcCCCC
Q 040253 293 SSKKLTD-LGF-KFKYSLDDMFTGAVDTCRAKGLLP 326 (338)
Q Consensus 293 ~~~~~~~-lg~-~~~~~~~~~i~~~~~~~~~~~~~~ 326 (338)
|++++++ ||| +| ++++++|+++++|++++|.++
T Consensus 307 d~~k~~~~lG~~~p-~~~~~~l~~~~~~~~~~g~~~ 341 (342)
T 2x4g_A 307 DGRKAREELGFFST-TALDDTLLRAIDWFRDNGYFN 341 (342)
T ss_dssp CCHHHHHHHCCCCC-SCHHHHHHHHHHHHHHTTCCC
T ss_pred ChHHHHHhCCCCCC-CCHHHHHHHHHHHHHHcCCCC
Confidence 8999987 999 99 799999999999999999875
No 20
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=100.00 E-value=7.9e-44 Score=310.40 Aligned_cols=272 Identities=16% Similarity=0.181 Sum_probs=216.6
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC-ccEEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG-CTGVFH 83 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-~d~vi~ 83 (338)
+|+||||| +||||++++++|+++|++|++++|+.+... ++++++.+|++|.+++.+++++ +|+|||
T Consensus 3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~~~~~~~~Dl~d~~~~~~~~~~~~d~vih 69 (286)
T 3gpi_A 3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMP------------AGVQTLIADVTRPDTLASIVHLRPEILVY 69 (286)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC------------TTCCEEECCTTCGGGCTTGGGGCCSEEEE
T ss_pred CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccc------------cCCceEEccCCChHHHHHhhcCCCCEEEE
Confidence 57999999 599999999999999999999999876521 5789999999999999999987 999999
Q ss_pred ecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchH
Q 040253 84 LATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 163 (338)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y 163 (338)
+|+... ......++.|+.++.++++++++.+ +++|||+||.++|+ .....+++|++ +..|.+.|
T Consensus 70 ~a~~~~----~~~~~~~~~n~~~~~~ll~a~~~~~-~~~~v~~SS~~vyg--~~~~~~~~E~~---------~~~p~~~Y 133 (286)
T 3gpi_A 70 CVAASE----YSDEHYRLSYVEGLRNTLSALEGAP-LQHVFFVSSTGVYG--QEVEEWLDEDT---------PPIAKDFS 133 (286)
T ss_dssp CHHHHH----HC-----CCSHHHHHHHHHHTTTSC-CCEEEEEEEGGGCC--CCCSSEECTTS---------CCCCCSHH
T ss_pred eCCCCC----CCHHHHHHHHHHHHHHHHHHHhhCC-CCEEEEEcccEEEc--CCCCCCCCCCC---------CCCCCChh
Confidence 998643 2234678899999999999999888 89999999999998 45566788887 55678899
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCC-CccccHHHHHHHHHHhh
Q 040253 164 FVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQ-GQFVHLDDLCSAHIFLF 242 (338)
Q Consensus 164 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~~l 242 (338)
+.+|.++|.+ +.+ ++++++||+++|||+.. ..+.... . ......+.. ++|+|++|+|++++.++
T Consensus 134 ~~sK~~~E~~-~~~-----~~~~ilR~~~v~G~~~~----~~~~~~~----~-~~~~~~~~~~~~~i~v~Dva~~~~~~~ 198 (286)
T 3gpi_A 134 GKRMLEAEAL-LAA-----YSSTILRFSGIYGPGRL----RMIRQAQ----T-PEQWPARNAWTNRIHRDDGAAFIAYLI 198 (286)
T ss_dssp HHHHHHHHHH-GGG-----SSEEEEEECEEEBTTBC----HHHHHTT----C-GGGSCSSBCEECEEEHHHHHHHHHHHH
T ss_pred hHHHHHHHHH-Hhc-----CCeEEEecccccCCCch----hHHHHHH----h-cccCCCcCceeEEEEHHHHHHHHHHHH
Confidence 9999999998 543 99999999999999854 1212111 1 111222222 68999999999999999
Q ss_pred cC---CCCCCceEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCccccccccccchhhhhhcCCcccc-cHHHHHHHHHH
Q 040253 243 EH---PNAKGRYICS-SHPATILELAKFLREKYPEFNVPTEFEDVDENMKNMLFSSKKLTDLGFKFKY-SLDDMFTGAVD 317 (338)
Q Consensus 243 ~~---~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~-~~~~~i~~~~~ 317 (338)
++ ...+++||++ ++++|+.|+++.+.+.+|. +.+..... .......+|+++++.|||+|++ +++++|+++++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~--~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~~ 275 (286)
T 3gpi_A 199 QQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGI-AYPAGATP--PVQGNKKLSNARLLASGYQLIYPDYVSGYGALLA 275 (286)
T ss_dssp HHHTTSCCCSEEEECCSCCEEHHHHHHHHHHHTTC-CCCCSCCC--CBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHHH
T ss_pred hhhccCCCCceEEEeCCCCCCHHHHHHHHHHHcCC-CCCCCCCc--ccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHHH
Confidence 88 4567799985 5789999999999999985 33333222 4455677899999889999999 59999999999
Q ss_pred HHHHcC
Q 040253 318 TCRAKG 323 (338)
Q Consensus 318 ~~~~~~ 323 (338)
|+....
T Consensus 276 ~~~~~~ 281 (286)
T 3gpi_A 276 AMREGH 281 (286)
T ss_dssp HHTC--
T ss_pred HHhccc
Confidence 997543
No 21
>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.3e-43 Score=316.11 Aligned_cols=301 Identities=20% Similarity=0.232 Sum_probs=226.9
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC--CeEEEEEcCCC--cHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG--YAVRATVRDPD--NKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
+|+||||||+||||++++++|+++| ++|++++|+.. ....+..+ . ..++++++.+|++|.+++.+++.++|+
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~---~-~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 78 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDL---E-DDPRYTFVKGDVADYELVKELVRKVDG 78 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTT---T-TCTTEEEEECCTTCHHHHHHHHHTCSE
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhh---c-cCCceEEEEcCCCCHHHHHHHhhCCCE
Confidence 4689999999999999999999986 89999999642 22222111 1 125789999999999999999999999
Q ss_pred EEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCC
Q 040253 81 VFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMT 159 (338)
Q Consensus 81 vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p 159 (338)
|||+|+..... .......+++.|+.++.++++++...+..++|||+||.++|+ .....+++|++ +..|
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg--~~~~~~~~E~~---------~~~~ 147 (336)
T 2hun_A 79 VVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYG--DILKGSFTEND---------RLMP 147 (336)
T ss_dssp EEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGC--CCSSSCBCTTB---------CCCC
T ss_pred EEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHC--CCCCCCcCCCC---------CCCC
Confidence 99999965411 112335789999999999999999876237999999999997 33345677776 4457
Q ss_pred CchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhh-hhcccCCC-CCCCCCC-CccccHHHHHH
Q 040253 160 GWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITAL-SPITRNEA-HYPIIKQ-GQFVHLDDLCS 236 (338)
Q Consensus 160 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~-~~~i~v~D~a~ 236 (338)
.+.|+.+|.++|.+++.+++++|++++++||+++|||+..... .+...+ ....+... .++.+.. ++++|++|+|+
T Consensus 148 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 225 (336)
T 2hun_A 148 SSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEK--LIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVR 225 (336)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTS--HHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCc--hHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHH
Confidence 7899999999999999999989999999999999999864321 111111 11223332 2233333 68999999999
Q ss_pred HHHHhhcCCCCCCceEEe-cCCCCHHHHHHHHHHhCCCCCCCCC-CCCccccccccccchhhhhh-cCCcccccHHHHHH
Q 040253 237 AHIFLFEHPNAKGRYICS-SHPATILELAKFLREKYPEFNVPTE-FEDVDENMKNMLFSSKKLTD-LGFKFKYSLDDMFT 313 (338)
Q Consensus 237 ~~~~~l~~~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-lg~~~~~~~~~~i~ 313 (338)
+++.+++....+++||++ +.++|+.|+++.+.+.+|....... ....+.......+|++++++ |||+|+++++++|+
T Consensus 226 ~~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~l~ 305 (336)
T 2hun_A 226 AIELVLLKGESREIYNISAGEEKTNLEVVKIILRLMGKGEELIELVEDRPGHDLRYSLDSWKITRDLKWRPKYTFDEGIK 305 (336)
T ss_dssp HHHHHHHHCCTTCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECCCTTCCCCCCBCCHHHHHHHCCCCSSCHHHHHH
T ss_pred HHHHHHhCCCCCCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCCCCCchhhhcCCHHHHHHHhCCCCCCCHHHHHH
Confidence 999999876667789985 4679999999999999985321111 11122223345689999987 99999999999999
Q ss_pred HHHHHHHHc
Q 040253 314 GAVDTCRAK 322 (338)
Q Consensus 314 ~~~~~~~~~ 322 (338)
++++|++++
T Consensus 306 ~~~~~~~~~ 314 (336)
T 2hun_A 306 KTIDWYLKN 314 (336)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHhC
Confidence 999999875
No 22
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=100.00 E-value=1.9e-43 Score=319.76 Aligned_cols=301 Identities=17% Similarity=0.164 Sum_probs=221.7
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC-CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG-YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
+|+||||||+||||++++++|+++| ++|++++|+...... .+ . ..++++++.+|++|++++.++++++|+|||
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~l---~-~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih 105 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKI--NV---P-DHPAVRFSETSITDDALLASLQDEYDYVFH 105 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGG--GS---C-CCTTEEEECSCTTCHHHHHHCCSCCSEEEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchh--hc---c-CCCceEEEECCCCCHHHHHHHhhCCCEEEE
Confidence 5799999999999999999999999 999999997654211 01 0 125789999999999999999999999999
Q ss_pred ecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhC-CCccEEEEecCceeeeccCCCCCCcC--CCCCCchhhhhhcc-C
Q 040253 84 LATPMDFE-SKDPENEVIRPTINGMVSIMRACKNA-KTVRRLVFTSSAGTLDVEEHRKPVYD--ETSWSDLDFVRSVK-M 158 (338)
Q Consensus 84 ~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~Ss~~v~~~~~~~~~~~~--e~~~~~~~~~~~~~-~ 158 (338)
+|+..... ........++.|+.++.+++++|++. + +++|||+||.++|+ .....+++ |++|.. +. .
T Consensus 106 ~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~-~~~~V~~SS~~vyg--~~~~~~~~~~E~~~~~------~~~~ 176 (377)
T 2q1s_A 106 LATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKR-LKKVVYSAAGCSIA--EKTFDDAKATEETDIV------SLHN 176 (377)
T ss_dssp CCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSS-CCEEEEEEEC----------------CCCCCC------CSSC
T ss_pred CCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeCCHHHcC--CCCCCCcCcccccccc------cccC
Confidence 99965421 11234578899999999999999988 7 88999999999998 33344566 665310 22 4
Q ss_pred CCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCC---------CCCC--ChhHHHhhh-hcccCCCC-CCCCCC
Q 040253 159 TGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFL---------TSSM--PPSLITALS-PITRNEAH-YPIIKQ 225 (338)
Q Consensus 159 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~---------~~~~--~~~~~~~~~-~~~~~~~~-~~~~~~ 225 (338)
|.+.|+.+|.++|.+++.+++++|++++++||+++|||+. .... ...+..++. ...+.+.. ++.+..
T Consensus 177 ~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~ 256 (377)
T 2q1s_A 177 NDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVA 256 (377)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCC
T ss_pred CCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCe
Confidence 6789999999999999999888899999999999999986 2100 111211121 22333332 333333
Q ss_pred -CccccHHHHHHH-HHHhhcCCCCCCceEEe-cCCCCHHHHHHHHHHhCCCCCCCCC-CCCcccccc-ccccchhhhhh-
Q 040253 226 -GQFVHLDDLCSA-HIFLFEHPNAKGRYICS-SHPATILELAKFLREKYPEFNVPTE-FEDVDENMK-NMLFSSKKLTD- 299 (338)
Q Consensus 226 -~~~i~v~D~a~~-~~~~l~~~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~- 299 (338)
++|+|++|+|++ ++.+++++..+ +||++ ++++|+.|+++.+.+.+|.. .+.. .+..+.... ...+|++++++
T Consensus 257 ~~~~i~v~Dva~a~i~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~p~~~~~~~~~~~~d~~k~~~~ 334 (377)
T 2q1s_A 257 TRDFIFVEDVANGLIACAADGTPGG-VYNIASGKETSIADLATKINEITGNN-TELDRLPKRPWDNSGKRFGSPEKARRE 334 (377)
T ss_dssp EECCEEHHHHHHHHHHHHHHCCTTE-EEECCCCCCEEHHHHHHHHHHHHTCC-SCCCCCCCCGGGCC-CCCCCCHHHHHH
T ss_pred EEeeEEHHHHHHHHHHHHHhcCCCC-eEEecCCCceeHHHHHHHHHHHhCCC-CCceeCCCCccccccccccCHHHHHHH
Confidence 789999999999 99999886644 99985 57899999999999998742 2222 222233444 67789999976
Q ss_pred cCCcccccHHHHHHHHHHHHHHc
Q 040253 300 LGFKFKYSLDDMFTGAVDTCRAK 322 (338)
Q Consensus 300 lg~~~~~~~~~~i~~~~~~~~~~ 322 (338)
|||+|+++++++|+++++|++++
T Consensus 335 lG~~p~~~l~e~l~~~~~~~~~~ 357 (377)
T 2q1s_A 335 LGFSADVSIDDGLRKTIEWTKAN 357 (377)
T ss_dssp HCCCCCCCHHHHHHHHHHHHHHT
T ss_pred cCCCCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999864
No 23
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=100.00 E-value=1.5e-43 Score=318.24 Aligned_cols=304 Identities=16% Similarity=0.141 Sum_probs=227.6
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC--ccEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG--CTGVF 82 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~vi 82 (338)
+|+||||||+||||++++++|+++|++|++++|++.....+...... ..+++++.+|++|++++.+++++ +|+||
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 85 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARV---ADGMQSEIGDIRDQNKLLESIREFQPEIVF 85 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTT---TTTSEEEECCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhcc---CCceEEEEccccCHHHHHHHHHhcCCCEEE
Confidence 58999999999999999999999999999999987654333222111 25789999999999999998875 89999
Q ss_pred EecccCCC-CCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCc
Q 040253 83 HLATPMDF-ESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGW 161 (338)
Q Consensus 83 ~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~ 161 (338)
|+|+.... .........++.|+.++.++++++...+.+++|||+||.++|+.... ..+++|++ +..|.+
T Consensus 86 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~-~~~~~E~~---------~~~~~~ 155 (357)
T 1rkx_A 86 HMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEW-IWGYRENE---------AMGGYD 155 (357)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCS-SSCBCTTS---------CBCCSS
T ss_pred ECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCc-CCCCCCCC---------CCCCCC
Confidence 99985321 11123347889999999999999988654689999999999973211 23567765 445778
Q ss_pred hHHHHHHHHHHHHHHHHHHc---------CccEEEEcCCceeCCCCCCCCChhHHHhhh-hcccCCCCCCCCCC-Ccccc
Q 040253 162 MYFVSKTLAEQAAWKFAEEN---------NIDFISIIPSLVVGPFLTSSMPPSLITALS-PITRNEAHYPIIKQ-GQFVH 230 (338)
Q Consensus 162 ~Y~~sK~~~E~~~~~~~~~~---------~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~i~ 230 (338)
.|+.+|.++|.+++.+++++ |++++++||+.+|||+.... ...+..++. ...+....+..+.. ++|+|
T Consensus 156 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~ 234 (357)
T 1rkx_A 156 PYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRIVPDILRAFEQSQPVIIRNPHAIRPWQH 234 (357)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCHHHHHHHHHHTTCCEECSCTTCEECCEE
T ss_pred ccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc-ccHHHHHHHHHhcCCCEEECCCCCeeccEe
Confidence 99999999999999998765 99999999999999986432 112222221 22344333333333 78999
Q ss_pred HHHHHHHHHHhhcC-----CCCCCceEEec---CCCCHHHHHHHHHHhCCCCCCCCCCCC--ccccccccccchhhhhh-
Q 040253 231 LDDLCSAHIFLFEH-----PNAKGRYICSS---HPATILELAKFLREKYPEFNVPTEFED--VDENMKNMLFSSKKLTD- 299 (338)
Q Consensus 231 v~D~a~~~~~~l~~-----~~~~~~~~~~~---~~~t~~e~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~- 299 (338)
++|+|++++.++++ ...+++||+++ +++|+.|+++.+.+.+|. +.+..... .+.......+|++++++
T Consensus 235 v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~~d~~k~~~~ 313 (357)
T 1rkx_A 235 VLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGE-GASWQLDGNAHPHEAHYLKLDCSKAKMQ 313 (357)
T ss_dssp THHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCT-TCCEEC-------CCCCCCBCCHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCC-CCccccCCCCCCcCcccccCCHHHHHHH
Confidence 99999999999874 23467899863 579999999999999874 22222211 12334556789999987
Q ss_pred cCCcccccHHHHHHHHHHHHHHcC
Q 040253 300 LGFKFKYSLDDMFTGAVDTCRAKG 323 (338)
Q Consensus 300 lg~~~~~~~~~~i~~~~~~~~~~~ 323 (338)
|||+|+++++++|+++++|++++.
T Consensus 314 lG~~p~~~l~e~l~~~~~~~~~~~ 337 (357)
T 1rkx_A 314 LGWHPRWNLNTTLEYIVGWHKNWL 337 (357)
T ss_dssp HCCCCCCCHHHHHHHHHHHHHHHH
T ss_pred hCCCcCCcHHHHHHHHHHHHHHHh
Confidence 999999999999999999998753
No 24
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=100.00 E-value=1.4e-43 Score=315.98 Aligned_cols=299 Identities=19% Similarity=0.223 Sum_probs=227.6
Q ss_pred cEEEEeCCchhhHHHHHHHHHHC---C---CeEEEEEcCCC--cHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC
Q 040253 6 ETVCVTGASGFIGSWLIMRLLER---G---YAVRATVRDPD--NKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG 77 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~---g---~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (338)
|+||||||+||||++++++|+++ | ++|++++|+.. ....+..+. ...+++++.+|++|++++.+++.+
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~ 76 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVD----ADPRLRFVHGDIRDAGLLARELRG 76 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGT----TCTTEEEEECCTTCHHHHHHHTTT
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcc----cCCCeEEEEcCCCCHHHHHHHhcC
Confidence 58999999999999999999997 8 99999999653 222222111 125789999999999999999999
Q ss_pred ccEEEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhc
Q 040253 78 CTGVFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSV 156 (338)
Q Consensus 78 ~d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~ 156 (338)
+|+|||+|+..... ...+.+.+++.|+.++.++++++.+.+ +++|||+||.++|+. ....+++|++ +
T Consensus 77 ~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~-~~~~v~~SS~~vyg~--~~~~~~~E~~---------~ 144 (337)
T 1r6d_A 77 VDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAG-VGRVVHVSTNQVYGS--IDSGSWTESS---------P 144 (337)
T ss_dssp CCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGCC--CSSSCBCTTS---------C
T ss_pred CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEecchHHhCC--CCCCCCCCCC---------C
Confidence 99999999965411 112335789999999999999999988 889999999999973 3345677776 4
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhh-hhcccCCC-CCCCCCC-CccccHHH
Q 040253 157 KMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITAL-SPITRNEA-HYPIIKQ-GQFVHLDD 233 (338)
Q Consensus 157 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~-~~~i~v~D 233 (338)
..|.+.|+.+|.++|.+++.++++++++++++||+++|||+.... ..+...+ ....+... .++.+.+ ++++|++|
T Consensus 145 ~~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 222 (337)
T 1r6d_A 145 LEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDD 222 (337)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT--SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHH
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC--ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHH
Confidence 457789999999999999999988899999999999999986432 1111111 11223332 2233333 68999999
Q ss_pred HHHHHHHhhcCCCCCCceEEe-cCCCCHHHHHHHHHHhCCCCCCCCC-CCCccccccccccchhhhhh-cCCcccccHHH
Q 040253 234 LCSAHIFLFEHPNAKGRYICS-SHPATILELAKFLREKYPEFNVPTE-FEDVDENMKNMLFSSKKLTD-LGFKFKYSLDD 310 (338)
Q Consensus 234 ~a~~~~~~l~~~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-lg~~~~~~~~~ 310 (338)
+|++++.+++++..+++||++ +.++|+.|+++.+.+.+|....... ....+.......+|++++++ |||+|++++++
T Consensus 223 va~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~e 302 (337)
T 1r6d_A 223 HCRGIALVLAGGRAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVADRKGHDLRYSLDGGKIERELGYRPQVSFAD 302 (337)
T ss_dssp HHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECCCTTCCCBCCBCCHHHHHHHCCCCCSCHHH
T ss_pred HHHHHHHHHhCCCCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCCCCCCcceeecCHHHHHHHcCCCCCCCHHH
Confidence 999999999876666799985 5779999999999999875211011 11112222345688999987 99999999999
Q ss_pred HHHHHHHHHHHc
Q 040253 311 MFTGAVDTCRAK 322 (338)
Q Consensus 311 ~i~~~~~~~~~~ 322 (338)
+|+++++|++++
T Consensus 303 ~l~~~~~~~~~~ 314 (337)
T 1r6d_A 303 GLARTVRWYREN 314 (337)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999999865
No 25
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=100.00 E-value=3.4e-43 Score=313.27 Aligned_cols=302 Identities=16% Similarity=0.155 Sum_probs=229.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcH--HHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC--cc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNK--KKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG--CT 79 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d 79 (338)
++|+||||||+||||++++++|+++|++|++++|++... ..+..+. ..++++++.+|++|.+++.+++++ +|
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 88 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELG----IEGDIQYEDGDMADACSVQRAVIKAQPQ 88 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTT----CGGGEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhcc----ccCceEEEECCCCCHHHHHHHHHHcCCC
Confidence 578999999999999999999999999999999976542 1222211 115789999999999999998874 79
Q ss_pred EEEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCc-cEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhcc
Q 040253 80 GVFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTV-RRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVK 157 (338)
Q Consensus 80 ~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~ 157 (338)
+|||+|+..... ........++.|+.++.++++++.+.+ + ++|||+||.++|+ .....+++|++ +.
T Consensus 89 ~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~SS~~v~g--~~~~~~~~E~~---------~~ 156 (335)
T 1rpn_A 89 EVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFS-PETRFYQASTSEMFG--LIQAERQDENT---------PF 156 (335)
T ss_dssp EEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTSEEEEEEEGGGGC--SCSSSSBCTTS---------CC
T ss_pred EEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEEeCHHHhC--CCCCCCCCccc---------CC
Confidence 999999965421 123345788999999999999999887 5 8999999999998 33445778887 44
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCCh-hHHHhh-hhcccCCC--CCCCCCC-CccccHH
Q 040253 158 MTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPP-SLITAL-SPITRNEA--HYPIIKQ-GQFVHLD 232 (338)
Q Consensus 158 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~-~~~~~~~~--~~~~~~~-~~~i~v~ 232 (338)
.|.+.|+.+|.++|.+++.++++++++++++||+++|||+....... .+...+ ....+... .++.+.. ++|+|++
T Consensus 157 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~ 236 (335)
T 1rpn_A 157 YPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAG 236 (335)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHH
Confidence 57889999999999999999988899999999999999986543211 122222 12233322 2333333 7899999
Q ss_pred HHHHHHHHhhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCC-CCCCCCC---ccccccccccchhhhhh-cCCcccc
Q 040253 233 DLCSAHIFLFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFN-VPTEFED---VDENMKNMLFSSKKLTD-LGFKFKY 306 (338)
Q Consensus 233 D~a~~~~~~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~-lg~~~~~ 306 (338)
|+|++++.+++++. .++||+ +++++|+.|+++.+.+.+|... ....+.. .+........|++++++ |||+|++
T Consensus 237 Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~ 315 (335)
T 1rpn_A 237 DYVEAMWLMLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFFRPAEVDVLLGNPAKAQRVLGWKPRT 315 (335)
T ss_dssp HHHHHHHHHHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGCCSSCCCBCCBCTHHHHHHHCCCCCS
T ss_pred HHHHHHHHHHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccCCCcchhhcCCHHHHHHhcCCCcCC
Confidence 99999999998765 579988 4577999999999999987521 0011111 12233456689999987 9999999
Q ss_pred cHHHHHHHHHHHHHHc
Q 040253 307 SLDDMFTGAVDTCRAK 322 (338)
Q Consensus 307 ~~~~~i~~~~~~~~~~ 322 (338)
+++++|+++++|++++
T Consensus 316 ~l~e~l~~~~~~~~~~ 331 (335)
T 1rpn_A 316 SLDELIRMMVEADLRR 331 (335)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHh
Confidence 9999999999999864
No 26
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=100.00 E-value=4.4e-44 Score=316.95 Aligned_cols=291 Identities=16% Similarity=0.142 Sum_probs=219.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc----HHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCcc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN----KKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCT 79 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 79 (338)
++|+|||||||||||++++++|+++|++|++++|+... ...+..+. ..++++++.+|++ ++|
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~Dl~----------~~d 71 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFL----EKPVLELEERDLS----------DVR 71 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEE----CSCGGGCCHHHHT----------TEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhc----cCCCeeEEeCccc----------cCC
Confidence 47899999999999999999999999999999997651 11110000 0123445555554 799
Q ss_pred EEEEecccCCC-CCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccC
Q 040253 80 GVFHLATPMDF-ESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKM 158 (338)
Q Consensus 80 ~vi~~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~ 158 (338)
+|||+|+.... .........++ |+.++.++++++++.+ +++|||+||.++|+ .....+++|++ +..
T Consensus 72 ~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~-v~~~v~~SS~~v~~--~~~~~~~~E~~---------~~~ 138 (321)
T 3vps_A 72 LVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVG-VPKVVVGSTCEVYG--QADTLPTPEDS---------PLS 138 (321)
T ss_dssp EEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHT-CCEEEEEEEGGGGC--SCSSSSBCTTS---------CCC
T ss_pred EEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcC-CCeEEEecCHHHhC--CCCCCCCCCCC---------CCC
Confidence 99999987551 11122335667 9999999999999999 89999999999998 44566788887 455
Q ss_pred CCchHHHHHHHHHHHHHHHHHHcCc-cEEEEcCCceeCCCCCCCCChhHHHhh-hhcccCCC-CCCCCCC-CccccHHHH
Q 040253 159 TGWMYFVSKTLAEQAAWKFAEENNI-DFISIIPSLVVGPFLTSSMPPSLITAL-SPITRNEA-HYPIIKQ-GQFVHLDDL 234 (338)
Q Consensus 159 p~~~Y~~sK~~~E~~~~~~~~~~~~-~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~-~~~i~v~D~ 234 (338)
|.+.|+.+|+.+|.+++.+++++++ +++++||+++|||+..... .+.... ....+... .++.+.. ++|+|++|+
T Consensus 139 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dv 216 (321)
T 3vps_A 139 PRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDA--LVPRLCANLLTRNELPVEGDGEQRRDFTYITDV 216 (321)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTS--HHHHHHHHHHHHSEEEEETTSCCEECEEEHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCC--hHHHHHHHHHcCCCeEEeCCCCceEceEEHHHH
Confidence 7889999999999999999998999 9999999999999866521 111111 11223332 2333333 789999999
Q ss_pred HHHHHHhhcCCCCCCceEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCccccccccccchhhhhh-cCCcc-cccHHHH
Q 040253 235 CSAHIFLFEHPNAKGRYICS-SHPATILELAKFLREKYPEFNVPTEFEDVDENMKNMLFSSKKLTD-LGFKF-KYSLDDM 311 (338)
Q Consensus 235 a~~~~~~l~~~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~~~-~~~~~~~ 311 (338)
|++++.+++++..+ +||++ ++++|+.|+++.+. .+|........+..+........|++++++ |||+| +++++++
T Consensus 217 a~~~~~~~~~~~~g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~~~~ 294 (321)
T 3vps_A 217 VDKLVALANRPLPS-VVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPRPNEITEFRADTALQTRQIGERSGGIGIEEG 294 (321)
T ss_dssp HHHHHHGGGSCCCS-EEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCCTTCCSBCCBCCHHHHHHHCCCSCCCCHHHH
T ss_pred HHHHHHHHhcCCCC-eEEecCCCcccHHHHHHHHH-HhCCCCccccCCCCCCCcceeeccHHHHHHHhCCCCCcCCHHHH
Confidence 99999999988775 99985 68899999999999 887432111222334455677899999998 99999 8899999
Q ss_pred HHHHHHHHHHcCCC
Q 040253 312 FTGAVDTCRAKGLL 325 (338)
Q Consensus 312 i~~~~~~~~~~~~~ 325 (338)
|+++++|+++++..
T Consensus 295 l~~~~~~~~~~~~~ 308 (321)
T 3vps_A 295 IRLTLEWWQSRDLD 308 (321)
T ss_dssp HHHHHHHHHTSCTT
T ss_pred HHHHHHHHHhCCCc
Confidence 99999999988753
No 27
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=100.00 E-value=2.4e-43 Score=315.88 Aligned_cols=302 Identities=18% Similarity=0.234 Sum_probs=226.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc-------HHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN-------KKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR- 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~- 76 (338)
+|+||||||+||||++++++|+++|++|++++|+... ......+.... ..+++++.+|++|.+++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~D~~~~~~~~~~~~~ 79 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT--GRSVEFEEMDILDQGALQRLFKK 79 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc--CCceEEEECCCCCHHHHHHHHHh
Confidence 5899999999999999999999999999999986432 12222221100 1468999999999999999888
Q ss_pred -CccEEEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhh
Q 040253 77 -GCTGVFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVR 154 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~ 154 (338)
++|+|||+|+..... ........++.|+.++.++++++++.+ +++|||+||.++|+ .....+++|++
T Consensus 80 ~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g--~~~~~~~~E~~-------- 148 (348)
T 1ek6_A 80 YSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHG-VKNLVFSSSATVYG--NPQYLPLDEAH-------- 148 (348)
T ss_dssp CCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGGC--SCSSSSBCTTS--------
T ss_pred cCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhC--CCCCCCcCCCC--------
Confidence 899999999965411 112334788999999999999999888 88999999999997 44456788886
Q ss_pred hccCC-CchHHHHHHHHHHHHHHHHHHcC--ccEEEEcCCceeCCCCCCC--------CChhHHHhhhhcc--cCCC-CC
Q 040253 155 SVKMT-GWMYFVSKTLAEQAAWKFAEENN--IDFISIIPSLVVGPFLTSS--------MPPSLITALSPIT--RNEA-HY 220 (338)
Q Consensus 155 ~~~~p-~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~--~~~~-~~ 220 (338)
+..| .+.|+.+|..+|.+++.++++ + ++++++||+++|||+..+. ....+........ +... .+
T Consensus 149 -~~~p~~~~Y~~sK~~~e~~~~~~~~~-~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (348)
T 1ek6_A 149 -PTGGCTNPYGKSKFFIEEMIRDLCQA-DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVF 226 (348)
T ss_dssp -CCCCCSSHHHHHHHHHHHHHHHHHHH-CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEE
T ss_pred -CCCCCCCchHHHHHHHHHHHHHHHhc-CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEe
Confidence 3335 789999999999999999887 5 9999999999999953211 0112222222222 2211 11
Q ss_pred C------CCCC-CccccHHHHHHHHHHhhcCC--CCC-CceEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC-CCcccccc
Q 040253 221 P------IIKQ-GQFVHLDDLCSAHIFLFEHP--NAK-GRYICS-SHPATILELAKFLREKYPEFNVPTEF-EDVDENMK 288 (338)
Q Consensus 221 ~------~~~~-~~~i~v~D~a~~~~~~l~~~--~~~-~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~~-~~~~~~~~ 288 (338)
+ .+.. ++|+|++|+|++++.+++++ ..+ ++||++ ++++|+.|+++.+.+.+|. +++... ...+....
T Consensus 227 g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~ 305 (348)
T 1ek6_A 227 GNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGK-KIPYKVVARREGDVA 305 (348)
T ss_dssp CSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCS-CCCEEEECCCTTCCS
T ss_pred CCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCC-CCceeeCCCCCccch
Confidence 1 2222 68999999999999999864 234 589984 6789999999999999874 333221 12233345
Q ss_pred ccccchhhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 040253 289 NMLFSSKKLTD-LGFKFKYSLDDMFTGAVDTCRAK 322 (338)
Q Consensus 289 ~~~~~~~~~~~-lg~~~~~~~~~~i~~~~~~~~~~ 322 (338)
...+|++++++ |||+|+++++++|+++++|++++
T Consensus 306 ~~~~d~~k~~~~lG~~p~~~l~~~l~~~~~w~~~~ 340 (348)
T 1ek6_A 306 ACYANPSLAQEELGWTAALGLDRMCEDLWRWQKQN 340 (348)
T ss_dssp EECBCCHHHHHTTCCCCCCCHHHHHHHHHHHHHHC
T ss_pred hhccCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhc
Confidence 56789999976 99999999999999999999875
No 28
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=100.00 E-value=7.8e-44 Score=314.15 Aligned_cols=295 Identities=20% Similarity=0.242 Sum_probs=224.6
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC--CccEEEE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--GCTGVFH 83 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~ 83 (338)
|+||||||+||||++++++|+++|++|++++|....... ... .+++++.+|++|++++.++++ ++|+|||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~-----~~~---~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~ 72 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE-----NVP---KGVPFFRVDLRDKEGVERAFREFRPTHVSH 72 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG-----GSC---TTCCEECCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh-----hcc---cCeEEEECCCCCHHHHHHHHHhcCCCEEEE
Confidence 489999999999999999999999999999885432110 011 357889999999999998887 8999999
Q ss_pred ecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCc-eeeeccCCCCCCcCCCCCCchhhhhhccCCCc
Q 040253 84 LATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSA-GTLDVEEHRKPVYDETSWSDLDFVRSVKMTGW 161 (338)
Q Consensus 84 ~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~-~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~ 161 (338)
+|+..... ........+++|+.++.++++++++.+ +++|||+||. ++|+.. ....+++|++ +..|.+
T Consensus 73 ~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~~g~~-~~~~~~~E~~---------~~~~~~ 141 (311)
T 2p5y_A 73 QAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYG-VEKLVFASTGGAIYGEV-PEGERAEETW---------PPRPKS 141 (311)
T ss_dssp CCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEEEEHHHHHCCC-CTTCCBCTTS---------CCCCCS
T ss_pred CccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCChhhcCCC-CCCCCcCCCC---------CCCCCC
Confidence 99864411 112334688999999999999999888 8899999998 888721 2344677776 345778
Q ss_pred hHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCC-hhHHHhhh-hcccCCC-CC-----CCCCC-CccccHH
Q 040253 162 MYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMP-PSLITALS-PITRNEA-HY-----PIIKQ-GQFVHLD 232 (338)
Q Consensus 162 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~-~~~~~~~-~~-----~~~~~-~~~i~v~ 232 (338)
.|+.+|.++|.+++.+++++|++++++||+++|||+...... ..+...+. ...+.+. .+ +.+.. ++|+|++
T Consensus 142 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 221 (311)
T 2p5y_A 142 PYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVG 221 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHH
Confidence 999999999999999988889999999999999998654321 11111111 1123322 22 33333 6899999
Q ss_pred HHHHHHHHhhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCC-CCCccccccccccchhhhhhcCCcccccHHH
Q 040253 233 DLCSAHIFLFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFNVPTE-FEDVDENMKNMLFSSKKLTDLGFKFKYSLDD 310 (338)
Q Consensus 233 D~a~~~~~~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~ 310 (338)
|+|++++.+++.+ +++||+ ++.++|++|+++.+.+.+|. +.+.. .+..+.......+|++++++|||+|++++++
T Consensus 222 Dva~a~~~~~~~~--~~~~~i~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~ 298 (311)
T 2p5y_A 222 DVAEAHALALFSL--EGIYNVGTGEGHTTREVLMAVAEAAGK-APEVQPAPPRPGDLERSVLSPLKLMAHGWRPKVGFQE 298 (311)
T ss_dssp HHHHHHHHHHHHC--CEEEEESCSCCEEHHHHHHHHHHHHTC-CCCEEEECCCTTCCSBCCBCCHHHHTTTCCCSSCHHH
T ss_pred HHHHHHHHHHhCC--CCEEEeCCCCCccHHHHHHHHHHHhCC-CCCceeCCCCccchhhccCCHHHHHHCCCCCCCCHHH
Confidence 9999999999874 678998 46789999999999999874 22221 1222334456778999988899999999999
Q ss_pred HHHHHHHHHHHc
Q 040253 311 MFTGAVDTCRAK 322 (338)
Q Consensus 311 ~i~~~~~~~~~~ 322 (338)
+|+++++|++++
T Consensus 299 ~l~~~~~~~~~~ 310 (311)
T 2p5y_A 299 GIRLTVDHFRGA 310 (311)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHhh
Confidence 999999999753
No 29
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=100.00 E-value=2.3e-42 Score=314.92 Aligned_cols=307 Identities=20% Similarity=0.216 Sum_probs=227.8
Q ss_pred CcEEEEeCCchhhHHHHHHHHH-HCCCeEEEEEcCCCc---------HHHHHH-HhcCCCC--CCc---EEEEecccCCC
Q 040253 5 AETVCVTGASGFIGSWLIMRLL-ERGYAVRATVRDPDN---------KKKVKH-LLELPKA--STH---LTLWKADLAEE 68 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~---------~~~~~~-~~~~~~~--~~~---~~~~~~Dl~d~ 68 (338)
+|+||||||+||||++++++|+ ++|++|++++|+... ...+.. +...... ..+ ++++.+|++|+
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4699999999999999999999 999999999997554 233321 1111110 124 89999999999
Q ss_pred CCchhhhC--C-ccEEEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCC-----CC
Q 040253 69 GNFDEPIR--G-CTGVFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEH-----RK 139 (338)
Q Consensus 69 ~~~~~~~~--~-~d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~-----~~ 139 (338)
+.+.++++ + +|+|||+|+..... ........+++|+.++.++++++++.+ +++|||+||.++|+.... ..
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~-~~~iv~~SS~~v~g~~~~~~~~~~~ 160 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHK-CDKIIFSSSAAIFGNPTMGSVSTNA 160 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGTBSCCC-----CC
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhC-CCEEEEECCHHHhCCCCcccccccc
Confidence 99988887 6 99999999965421 112345789999999999999999888 889999999999973221 14
Q ss_pred CCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCC-------CChhHHHhh--
Q 040253 140 PVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSS-------MPPSLITAL-- 210 (338)
Q Consensus 140 ~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~-- 210 (338)
.+++|++ +..|.+.|+.+|.++|.+++.+++++|++++++||+++|||+..+. ....+..+.
T Consensus 161 ~~~~E~~---------~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~ 231 (397)
T 1gy8_A 161 EPIDINA---------KKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGR 231 (397)
T ss_dssp CCBCTTS---------CCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHH
T ss_pred cCcCccC---------CCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHH
Confidence 5677776 3457789999999999999999988899999999999999974321 111222111
Q ss_pred ---hhcccCC------------C-CCC------CCCC-CccccHHHHHHHHHHhhcCCCC------C---CceEE-ecCC
Q 040253 211 ---SPITRNE------------A-HYP------IIKQ-GQFVHLDDLCSAHIFLFEHPNA------K---GRYIC-SSHP 257 (338)
Q Consensus 211 ---~~~~~~~------------~-~~~------~~~~-~~~i~v~D~a~~~~~~l~~~~~------~---~~~~~-~~~~ 257 (338)
....+.. . .++ .+.. ++|||++|+|++++.+++++.. + ++||+ ++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~ 311 (397)
T 1gy8_A 232 VMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRG 311 (397)
T ss_dssp HHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCC
T ss_pred HHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCc
Confidence 2122221 1 111 2323 6899999999999999975321 2 68998 4678
Q ss_pred CCHHHHHHHHHHhCCCCCCCCCC-CCccccccccccchhhhhh-cCCcccc-cHHHHHHHHHHHHHHc
Q 040253 258 ATILELAKFLREKYPEFNVPTEF-EDVDENMKNMLFSSKKLTD-LGFKFKY-SLDDMFTGAVDTCRAK 322 (338)
Q Consensus 258 ~t~~e~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-lg~~~~~-~~~~~i~~~~~~~~~~ 322 (338)
+|+.|+++.+.+.+|. +.+... ...+.......+|++++++ |||+|++ +++++|+++++|++++
T Consensus 312 ~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~~~~~~~ 378 (397)
T 1gy8_A 312 YSVREVIEVARKTTGH-PIPVRECGRREGDPAYLVAASDKAREVLGWKPKYDTLEAIMETSWKFQRTH 378 (397)
T ss_dssp EEHHHHHHHHHHHHCC-CCCEEEECCCTTCCSEECBCCHHHHHHTCCCCSCCSHHHHHHHHHHHHHTC
T ss_pred ccHHHHHHHHHHHhCC-CCCeeeCCCCCCcccccccCHHHHHHHhCCCCCcCCHHHHHHHHHHHHHhc
Confidence 9999999999999874 333221 1123334567789999976 9999999 8999999999999876
No 30
>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}
Probab=100.00 E-value=2.8e-43 Score=311.16 Aligned_cols=293 Identities=15% Similarity=0.112 Sum_probs=222.4
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC--ccE
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG--CTG 80 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~ 80 (338)
.++|+|||||||||||++++++|+++|+ +..... .+++.+.+|++|++.+.+++++ +|+
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~~~d~ 64 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGEDW-------------VFVSSKDADLTDTAQTRALFEKVQPTH 64 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCEE-------------EECCTTTCCTTSHHHHHHHHHHSCCSE
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC------cccccc-------------cccCceecccCCHHHHHHHHhhcCCCE
Confidence 4578999999999999999999999998 111110 2455668999999999999985 999
Q ss_pred EEEecccCCC--CCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccC
Q 040253 81 VFHLATPMDF--ESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKM 158 (338)
Q Consensus 81 vi~~a~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~ 158 (338)
|||+|+.... .........++.|+.++.+++++|++.+ +++|||+||.++|+ .....+++|+++.. .+..
T Consensus 65 Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~-~~~~v~~SS~~vyg--~~~~~~~~E~~~~~-----~~~~ 136 (319)
T 4b8w_A 65 VIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVG-ARKVVSCLSTCIFP--DKTTYPIDETMIHN-----GPPH 136 (319)
T ss_dssp EEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSC--SSCCSSBCGGGGGB-----SCCC
T ss_pred EEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcC-CCeEEEEcchhhcC--CCCCCCcccccccc-----CCCC
Confidence 9999997541 1223445789999999999999999998 89999999999998 45566777775211 1223
Q ss_pred CCc-hHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCC--hhHHHhhh-----hcccCCC-CCCCCCC-Ccc
Q 040253 159 TGW-MYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMP--PSLITALS-----PITRNEA-HYPIIKQ-GQF 228 (338)
Q Consensus 159 p~~-~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~-----~~~~~~~-~~~~~~~-~~~ 228 (338)
|.+ .|+.+|+++|++++.++++++++++++||+++|||+...... ..+..++. ...+... .++.+.. ++|
T Consensus 137 p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 216 (319)
T 4b8w_A 137 NSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQF 216 (319)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECE
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEE
Confidence 444 699999999999999999899999999999999998754211 11111111 1233333 2334433 789
Q ss_pred ccHHHHHHHHHHhhcCCCC--CCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCCC-CCccccccccccchhhhhh-cCCc
Q 040253 229 VHLDDLCSAHIFLFEHPNA--KGRYIC-SSHPATILELAKFLREKYPEFNVPTEF-EDVDENMKNMLFSSKKLTD-LGFK 303 (338)
Q Consensus 229 i~v~D~a~~~~~~l~~~~~--~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-lg~~ 303 (338)
+|++|+|++++.+++++.. +++||+ +++++|+.|+++.+.+.+|. +.+... ...+........|++++++ |||.
T Consensus 217 i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~ 295 (319)
T 4b8w_A 217 IYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDF-HGEVTFDTTKSDGQFKKTASNSKLRTYLPDF 295 (319)
T ss_dssp EEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTC-CSCEEEETTSCCCCSCCCBCCHHHHHHCTTC
T ss_pred EeHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCC-CCcEEeCCCCCcCcccccCCHHHHHHhcCCC
Confidence 9999999999999987443 447887 56899999999999999984 222222 2223344556799999998 9999
Q ss_pred ccccHHHHHHHHHHHHHHcC
Q 040253 304 FKYSLDDMFTGAVDTCRAKG 323 (338)
Q Consensus 304 ~~~~~~~~i~~~~~~~~~~~ 323 (338)
|.++++++|+++++|++++.
T Consensus 296 p~~~~~~~l~~~~~~~~~~~ 315 (319)
T 4b8w_A 296 RFTPFKQAVKETCAWFTDNY 315 (319)
T ss_dssp CCCCHHHHHHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999764
No 31
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=100.00 E-value=7.4e-42 Score=305.57 Aligned_cols=300 Identities=17% Similarity=0.231 Sum_probs=222.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHH-HHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKK-KVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
.+|+||||||+||||++++++|+++|++|++++|+..... .+..+. ...+++++.+|+.+.. +.++|+||
T Consensus 26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~D~~~~~-----~~~~d~vi 96 (343)
T 2b69_A 26 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI----GHENFELINHDVVEPL-----YIEVDQIY 96 (343)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT----TCTTEEEEECCTTSCC-----CCCCSEEE
T ss_pred CCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc----cCCceEEEeCccCChh-----hcCCCEEE
Confidence 4689999999999999999999999999999999754321 111111 1257899999998753 56899999
Q ss_pred EecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCc
Q 040253 83 HLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGW 161 (338)
Q Consensus 83 ~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~ 161 (338)
|+|+..... ........++.|+.++.++++++++.+ + +|||+||.++|+ .....+++|+.|.... +..|.+
T Consensus 97 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g--~~~~~~~~E~~~~~~~----~~~~~~ 168 (343)
T 2b69_A 97 HLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVG-A-RLLLASTSEVYG--DPEVHPQSEDYWGHVN----PIGPRA 168 (343)
T ss_dssp ECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHT-C-EEEEEEEGGGGB--SCSSSSBCTTCCCBCC----SSSTTH
T ss_pred ECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhC-C-cEEEECcHHHhC--CCCCCCCcccccccCC----CCCCCC
Confidence 999965421 123345778999999999999999888 5 899999999997 3344567777543211 334678
Q ss_pred hHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhh-hhcccCCC-CCCCCCC-CccccHHHHHHHH
Q 040253 162 MYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITAL-SPITRNEA-HYPIIKQ-GQFVHLDDLCSAH 238 (338)
Q Consensus 162 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~-~~~i~v~D~a~~~ 238 (338)
.|+.+|.++|.+++.++++++++++++||+++|||+........+...+ ....+... .++.+.. ++++|++|+|+++
T Consensus 169 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~ 248 (343)
T 2b69_A 169 CYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGL 248 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHH
Confidence 9999999999999999888899999999999999986432111221111 12223332 2333333 6899999999999
Q ss_pred HHhhcCCCCCCceEEe-cCCCCHHHHHHHHHHhCCCCCCCCC-CCCccccccccccchhhhhh-cCCcccccHHHHHHHH
Q 040253 239 IFLFEHPNAKGRYICS-SHPATILELAKFLREKYPEFNVPTE-FEDVDENMKNMLFSSKKLTD-LGFKFKYSLDDMFTGA 315 (338)
Q Consensus 239 ~~~l~~~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-lg~~~~~~~~~~i~~~ 315 (338)
+.+++.+ .+++||++ ++++|+.|+++.+.+.+|.. .+.. .+...........|++++++ |||+|+++++++|+++
T Consensus 249 ~~~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~p~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~ 326 (343)
T 2b69_A 249 VALMNSN-VSSPVNLGNPEEHTILEFAQLIKNLVGSG-SEIQFLSEAQDDPQKRKPDIKKAKLMLGWEPVVPLEEGLNKA 326 (343)
T ss_dssp HHHHTSS-CCSCEEESCCCEEEHHHHHHHHHHHHTCC-CCEEEECCCTTCCCCCCBCCHHHHHHHCCCCCSCHHHHHHHH
T ss_pred HHHHhcC-CCCeEEecCCCCCcHHHHHHHHHHHhCCC-CCceeCCCCCCCCceecCCHHHHHHHcCCCCCCCHHHHHHHH
Confidence 9999875 36789885 57899999999999998742 2211 11112233456788999987 9999999999999999
Q ss_pred HHHHHHc
Q 040253 316 VDTCRAK 322 (338)
Q Consensus 316 ~~~~~~~ 322 (338)
++|++++
T Consensus 327 ~~~~~~~ 333 (343)
T 2b69_A 327 IHYFRKE 333 (343)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999864
No 32
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=100.00 E-value=1.4e-42 Score=310.50 Aligned_cols=306 Identities=19% Similarity=0.280 Sum_probs=225.1
Q ss_pred cEEEEeCCchhhHHHHHHHHHHC-CCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCC-CCchhhhCCccEEEE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLER-GYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEE-GNFDEPIRGCTGVFH 83 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~~~d~vi~ 83 (338)
|+||||||+||||++++++|+++ |++|++++|+......+ .. .++++++.+|++|. +.+.++++++|+|||
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~---~~----~~~~~~~~~D~~~~~~~~~~~~~~~d~vih 73 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF---LN----HPHFHFVEGDISIHSEWIEYHVKKCDVVLP 73 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG---TT----CTTEEEEECCTTTCSHHHHHHHHHCSEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHh---hc----CCCeEEEeccccCcHHHHHhhccCCCEEEE
Confidence 58999999999999999999998 89999999987553321 11 15789999999985 457778889999999
Q ss_pred ecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCch
Q 040253 84 LATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWM 162 (338)
Q Consensus 84 ~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~ 162 (338)
+|+..... ........++.|+.++.++++++++.+ ++|||+||.++|+ .....+++|+++... ..+...|.+.
T Consensus 74 ~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~v~~SS~~v~g--~~~~~~~~e~~~~~~--~~~~~~~~~~ 147 (345)
T 2bll_A 74 LVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYG--MCSDKYFDEDHSNLI--VGPVNKPRWI 147 (345)
T ss_dssp CBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGB--TCCCSSBCTTTCCCB--CCCTTCGGGH
T ss_pred cccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC--CeEEEEecHHHcC--CCCCCCcCCcccccc--cCcccCcccc
Confidence 99864411 112334678999999999999999877 7999999999998 334456777764311 0112245679
Q ss_pred HHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCC------ChhHHHhh-hhcccCCC-CCCCCCC-CccccHHH
Q 040253 163 YFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSM------PPSLITAL-SPITRNEA-HYPIIKQ-GQFVHLDD 233 (338)
Q Consensus 163 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~------~~~~~~~~-~~~~~~~~-~~~~~~~-~~~i~v~D 233 (338)
|+.+|..+|.+++.+++++|++++++||+.+|||+..... ...+..++ ....+... .++.+.+ ++++|++|
T Consensus 148 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D 227 (345)
T 2bll_A 148 YSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRD 227 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHH
T ss_pred cHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHH
Confidence 9999999999999998888999999999999999864311 11222222 12233332 2233333 68999999
Q ss_pred HHHHHHHhhcCCC---CCCceEEec-C-CCCHHHHHHHHHHhCCCCCCCCCCCCc---------------cccccccccc
Q 040253 234 LCSAHIFLFEHPN---AKGRYICSS-H-PATILELAKFLREKYPEFNVPTEFEDV---------------DENMKNMLFS 293 (338)
Q Consensus 234 ~a~~~~~~l~~~~---~~~~~~~~~-~-~~t~~e~~~~i~~~~~~~~~~~~~~~~---------------~~~~~~~~~~ 293 (338)
+|++++.+++++. .+++||+++ + ++|+.|+++.+.+.+|........+.. ........+|
T Consensus 228 va~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 307 (345)
T 2bll_A 228 GIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 307 (345)
T ss_dssp HHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC------------CCCCCBC
T ss_pred HHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhccccccchhhhccc
Confidence 9999999998763 356899865 4 799999999999987643211111110 0122345678
Q ss_pred hhhhhh-cCCcccccHHHHHHHHHHHHHHcCC
Q 040253 294 SKKLTD-LGFKFKYSLDDMFTGAVDTCRAKGL 324 (338)
Q Consensus 294 ~~~~~~-lg~~~~~~~~~~i~~~~~~~~~~~~ 324 (338)
++++++ |||+|+++++++|+++++|++++..
T Consensus 308 ~~k~~~~lG~~p~~~l~~~l~~~~~~~~~~~~ 339 (345)
T 2bll_A 308 IRNAHRCLDWEPKIDMQETIDETLDFFLRTVD 339 (345)
T ss_dssp CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHhcCCCccccHHHHHHHHHHHHHHcCC
Confidence 899887 9999999999999999999987643
No 33
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=100.00 E-value=1.1e-42 Score=311.43 Aligned_cols=304 Identities=16% Similarity=0.145 Sum_probs=223.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCC-cH-HHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC--ccE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPD-NK-KKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG--CTG 80 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~ 80 (338)
||+||||||+||||++++++|++.|++|++++|+.. .. .....+... .+++++.+|++|++++.+++++ +|+
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 76 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL----GNFEFVHGDIRNKNDVTRLITKYMPDS 76 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT----CCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccC----CceEEEEcCCCCHHHHHHHHhccCCCE
Confidence 479999999999999999999999999999998542 22 222222211 3689999999999999999987 999
Q ss_pred EEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCcc-EEEEecCceeeeccCCCCCC----------------c
Q 040253 81 VFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVR-RLVFTSSAGTLDVEEHRKPV----------------Y 142 (338)
Q Consensus 81 vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~Ss~~v~~~~~~~~~~----------------~ 142 (338)
|||+|+..... ........++.|+.++.++++++.+.+ ++ +|||+||.++|+. ....+ +
T Consensus 77 vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~iv~~SS~~v~g~--~~~~~~~e~~~~~~~~~~~~~~ 153 (347)
T 1orr_A 77 CFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYN-SNCNIIYSSTNKVYGD--LEQYKYNETETRYTCVDKPNGY 153 (347)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEEEEGGGGTT--CTTSCEEECSSCEEETTCTTCB
T ss_pred EEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEeccHHHhCC--CCcCCcccccccccccccccCc
Confidence 99999964421 112345788999999999999999888 64 9999999999973 22222 3
Q ss_pred CCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCC-hhHHHhh-hhcccC----
Q 040253 143 DETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMP-PSLITAL-SPITRN---- 216 (338)
Q Consensus 143 ~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~-~~~~~~---- 216 (338)
+|+. +..|.+.|+.+|.++|.+++.+++++|++++++||+.+|||+...... ..+...+ ....+.
T Consensus 154 ~e~~---------~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (347)
T 1orr_A 154 DEST---------QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGIN 224 (347)
T ss_dssp CTTS---------CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCC
T ss_pred cccC---------CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCC
Confidence 3333 334778999999999999999998889999999999999998643211 1111111 111122
Q ss_pred -CC-CCCCCCC-CccccHHHHHHHHHHhhcCC--CCCCceEEecC---CCCHHHHHHHHHHhCCCCCCCCC-CCCccccc
Q 040253 217 -EA-HYPIIKQ-GQFVHLDDLCSAHIFLFEHP--NAKGRYICSSH---PATILELAKFLREKYPEFNVPTE-FEDVDENM 287 (338)
Q Consensus 217 -~~-~~~~~~~-~~~i~v~D~a~~~~~~l~~~--~~~~~~~~~~~---~~t~~e~~~~i~~~~~~~~~~~~-~~~~~~~~ 287 (338)
+. .++.+.+ ++++|++|+|++++.+++.. ..+++||+++. ++|+.|+++.+.+.+|.. .+.. .+..+...
T Consensus 225 ~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~ 303 (347)
T 1orr_A 225 KPFTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNID-MRFTNLPVRESDQ 303 (347)
T ss_dssp CCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCC-CCEEEECCCSSCC
T ss_pred CCeEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCC-CCceeCCCCCCCc
Confidence 21 2333333 67999999999999999852 23558998653 499999999999998742 2221 11223334
Q ss_pred cccccchhhhhh-cCCcccccHHHHHHHHHHHHHHcCCC
Q 040253 288 KNMLFSSKKLTD-LGFKFKYSLDDMFTGAVDTCRAKGLL 325 (338)
Q Consensus 288 ~~~~~~~~~~~~-lg~~~~~~~~~~i~~~~~~~~~~~~~ 325 (338)
....+|++++++ |||+|+++++++|+++++|+++....
T Consensus 304 ~~~~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~~~~ 342 (347)
T 1orr_A 304 RVFVADIKKITNAIDWSPKVSAKDGVQKMYDWTSSILEH 342 (347)
T ss_dssp SEECBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHC---
T ss_pred ceeecCHHHHHHHHCCCccCCHHHHHHHHHHHHHHHHHh
Confidence 456789999976 99999999999999999999987654
No 34
>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*
Probab=100.00 E-value=1.1e-42 Score=313.11 Aligned_cols=301 Identities=16% Similarity=0.196 Sum_probs=224.3
Q ss_pred cEEEEeCCchhhHHHHHHHHHHC-CCeEEEEEcCCC--cHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC--CccE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLER-GYAVRATVRDPD--NKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--GCTG 80 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~ 80 (338)
|+||||||+||||++++++|++. |++|++++|+.. ....+..+ . ..++++++.+|++|.+++.++++ ++|+
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~---~-~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 76 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDI---S-ESNRYNFEHADICDSAEITRIFEQYQPDA 76 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTT---T-TCTTEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhh---h-cCCCeEEEECCCCCHHHHHHHHhhcCCCE
Confidence 47999999999999999999998 799999999652 22222111 1 12578999999999999999998 8999
Q ss_pred EEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhC--CCcc-------EEEEecCceeeeccCCCCC--------Cc
Q 040253 81 VFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNA--KTVR-------RLVFTSSAGTLDVEEHRKP--------VY 142 (338)
Q Consensus 81 vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~-------~~v~~Ss~~v~~~~~~~~~--------~~ 142 (338)
|||+|+..... ........+++|+.++.++++++... + ++ +|||+||.++|+....... ++
T Consensus 77 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~-v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~ 155 (361)
T 1kew_A 77 VMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSA-LGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLF 155 (361)
T ss_dssp EEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHT-SCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCB
T ss_pred EEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccC-cccccccCceEEEeCCHHHhCCCcccccccccccCCCC
Confidence 99999965411 11234578999999999999999987 6 65 9999999999973221011 56
Q ss_pred CCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhh-hhcccCCC-CC
Q 040253 143 DETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITAL-SPITRNEA-HY 220 (338)
Q Consensus 143 ~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~-~~ 220 (338)
+|++ +..|.+.|+.+|.++|.+++.+++++|++++++||+.+|||+..... .+...+ ....+... .+
T Consensus 156 ~E~~---------~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~ 224 (361)
T 1kew_A 156 TETT---------AYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEK--LIPLVILNALEGKPLPIY 224 (361)
T ss_dssp CTTS---------CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTS--HHHHHHHHHHHTCCEEEE
T ss_pred CCCC---------CCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCccc--HHHHHHHHHHcCCCceEc
Confidence 6665 44577899999999999999999888999999999999999864321 111111 11223322 22
Q ss_pred CCCCC-CccccHHHHHHHHHHhhcCCCCCCceEEec-CCCCHHHHHHHHHHhCCCCCC---CCC-----CCCcccccccc
Q 040253 221 PIIKQ-GQFVHLDDLCSAHIFLFEHPNAKGRYICSS-HPATILELAKFLREKYPEFNV---PTE-----FEDVDENMKNM 290 (338)
Q Consensus 221 ~~~~~-~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~-~~~t~~e~~~~i~~~~~~~~~---~~~-----~~~~~~~~~~~ 290 (338)
+.+.. ++++|++|+|++++.+++....+++||+++ .++|+.|+++.+.+.+|.... |.. ....+......
T Consensus 225 ~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~ 304 (361)
T 1kew_A 225 GKGDQIRDWLYVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGHDRRY 304 (361)
T ss_dssp TTSCCEEEEEEHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECCCTTCCCBC
T ss_pred CCCceeEeeEEHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCCCCccccee
Confidence 33333 689999999999999998766667899854 679999999999988763111 100 01112222345
Q ss_pred ccchhhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 040253 291 LFSSKKLTD-LGFKFKYSLDDMFTGAVDTCRAK 322 (338)
Q Consensus 291 ~~~~~~~~~-lg~~~~~~~~~~i~~~~~~~~~~ 322 (338)
.+|++++++ |||+|+++++++|+++++|++++
T Consensus 305 ~~d~~k~~~~lG~~p~~~~~e~l~~~~~~~~~~ 337 (361)
T 1kew_A 305 AIDAGKISRELGWKPLETFESGIRKTVEWYLAN 337 (361)
T ss_dssp CBCCHHHHHHHCCCCSCCHHHHHHHHHHHHHHC
T ss_pred ecCHHHHHHHhCCCCccCHHHHHHHHHHHHHhc
Confidence 689999987 99999999999999999999875
No 35
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=100.00 E-value=1.4e-41 Score=302.22 Aligned_cols=298 Identities=19% Similarity=0.195 Sum_probs=225.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC--CccEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--GCTGV 81 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~v 81 (338)
.+|+||||||+||||++++++|+++|++|++++|+....... ... .++++++.+|++|.+++.++++ ++|+|
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~---l~~v~~~~~Dl~d~~~~~~~~~~~~~D~v 92 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREV---LPP---VAGLSVIEGSVTDAGLLERAFDSFKPTHV 92 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGG---SCS---CTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhh---hhc---cCCceEEEeeCCCHHHHHHHHhhcCCCEE
Confidence 358999999999999999999999999999999965432210 000 1478999999999999999998 99999
Q ss_pred EEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCc
Q 040253 82 FHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGW 161 (338)
Q Consensus 82 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~ 161 (338)
||+|+.......... . +++|+.++.++++++.+.+ +++|||+||.++|+.......+++|++ .|.+
T Consensus 93 ih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~~~~~~~~~~~~E~~-----------~~~~ 158 (330)
T 2pzm_A 93 VHSAAAYKDPDDWAE-D-AATNVQGSINVAKAASKAG-VKRLLNFQTALCYGRPATVPIPIDSPT-----------APFT 158 (330)
T ss_dssp EECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHHT-CSEEEEEEEGGGGCSCSSSSBCTTCCC-----------CCCS
T ss_pred EECCccCCCccccCh-h-HHHHHHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCccCCCCcCCCC-----------CCCC
Confidence 999997553211222 3 8999999999999999888 889999999999973211111566664 3567
Q ss_pred hHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHH-HHHH
Q 040253 162 MYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCS-AHIF 240 (338)
Q Consensus 162 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~-~~~~ 240 (338)
.|+.+|.++|.+++.+ +++++++||+++|||+....+...+.. ....+. ..+..+..++++|++|+|+ +++.
T Consensus 159 ~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~i~~~Dva~~a~~~ 231 (330)
T 2pzm_A 159 SYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLAIGPIPTFYK--RLKAGQ-KCFCSDTVRDFLDMSDFLAIADLS 231 (330)
T ss_dssp HHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCCSSHHHHHHH--HHHTTC-CCCEESCEECEEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCCCCHHHHHHH--HHHcCC-EEeCCCCEecceeHHHHHHHHHHH
Confidence 9999999999998764 899999999999999852221111111 111232 2232222467999999999 9999
Q ss_pred hhcCCCCCCceEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC-CCccccccccccchhhh-----hhcCCcccccHHHHHH
Q 040253 241 LFEHPNAKGRYICS-SHPATILELAKFLREKYPEFNVPTEF-EDVDENMKNMLFSSKKL-----TDLGFKFKYSLDDMFT 313 (338)
Q Consensus 241 ~l~~~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~lg~~~~~~~~~~i~ 313 (338)
+++.+. +++||++ +.++|+.|+++.+.+.+|.. +... +..+ ......+|++++ ++|||+|+++++++|+
T Consensus 232 ~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~--~~~~~~~~~-~~~~~~~d~~k~~~~~l~~lG~~p~~~~~~~l~ 307 (330)
T 2pzm_A 232 LQEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGAT--LAEPVPVVA-PGADDVPSVVLDPSKTETEFGWKAKVDFKDTIT 307 (330)
T ss_dssp TSTTCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC--CSSCCCEEC-CCTTSCSEECBCCHHHHHHHCCCCCCCHHHHHH
T ss_pred HhhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCC--CceeCCCCc-chhhccCCHHHHhhchHHHcCCcccCCHHHHHH
Confidence 998865 7789985 57899999999999998854 2222 2122 344567788887 7799999999999999
Q ss_pred HHHHHHHHcCCCCCccCCC
Q 040253 314 GAVDTCRAKGLLPLLCENH 332 (338)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~ 332 (338)
++++|+++++++....+..
T Consensus 308 ~~~~~~~~~~~~~~~~~~~ 326 (330)
T 2pzm_A 308 GQLAWYDKYGVTDIFSHLS 326 (330)
T ss_dssp HHHHHHHHHCSCSCCCSSC
T ss_pred HHHHHHHhhCcccccCcCC
Confidence 9999999999987665543
No 36
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=100.00 E-value=9.6e-42 Score=311.52 Aligned_cols=313 Identities=14% Similarity=0.122 Sum_probs=224.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHH-----------------HHHHHhcCCCCCCcEEEEecccC
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKK-----------------KVKHLLELPKASTHLTLWKADLA 66 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~Dl~ 66 (338)
.+++||||||+||||++++++|+++|++|++++|...... .+..+... ...+++++.+|++
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~v~~~~~Dl~ 87 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL--TGKSIELYVGDIC 87 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH--HCCCCEEEESCTT
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhc--cCCceEEEECCCC
Confidence 4789999999999999999999999999999998643211 11111100 0147899999999
Q ss_pred CCCCchhhhCC--ccEEEEecccCCCC--CCCcc--chhhhhhhHHHHHHHHHHHhCCCc-cEEEEecCceeeeccCCCC
Q 040253 67 EEGNFDEPIRG--CTGVFHLATPMDFE--SKDPE--NEVIRPTINGMVSIMRACKNAKTV-RRLVFTSSAGTLDVEEHRK 139 (338)
Q Consensus 67 d~~~~~~~~~~--~d~vi~~a~~~~~~--~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~Ss~~v~~~~~~~~ 139 (338)
|.+++.+++++ +|+|||+||..... ..++. ...++.|+.++.++++++++.+ . ++|||+||.++|+.. .
T Consensus 88 d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~~~V~~SS~~vyg~~---~ 163 (404)
T 1i24_A 88 DFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFG-EECHLVKLGTMGEYGTP---N 163 (404)
T ss_dssp SHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGGCCC---S
T ss_pred CHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhC-CCcEEEEeCcHHHhCCC---C
Confidence 99999998886 99999999965411 11221 2377899999999999999887 5 599999999999732 2
Q ss_pred CCcCCCCCCchh-----hhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCC-------------
Q 040253 140 PVYDETSWSDLD-----FVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSS------------- 201 (338)
Q Consensus 140 ~~~~e~~~~~~~-----~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~------------- 201 (338)
.+++|+.|.... ....+..|.+.|+.+|.++|.+++.+++++|++++++||+++|||+....
T Consensus 164 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~ 243 (404)
T 1i24_A 164 IDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYD 243 (404)
T ss_dssp SCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCS
T ss_pred CCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCccccccccccccccc
Confidence 456665321100 00013457789999999999999999888899999999999999986421
Q ss_pred --CChhHHHhh-hhcccCCC-CCCCCCC-CccccHHHHHHHHHHhhcCCCC-C--CceEEecCCCCHHHHHHHHHHh---
Q 040253 202 --MPPSLITAL-SPITRNEA-HYPIIKQ-GQFVHLDDLCSAHIFLFEHPNA-K--GRYICSSHPATILELAKFLREK--- 270 (338)
Q Consensus 202 --~~~~~~~~~-~~~~~~~~-~~~~~~~-~~~i~v~D~a~~~~~~l~~~~~-~--~~~~~~~~~~t~~e~~~~i~~~--- 270 (338)
....+..++ ....+... .++.+.+ ++|+|++|+|++++.+++++.. + ++||++++++|+.|+++.+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~~~~s~~e~~~~i~~~~~~ 323 (404)
T 1i24_A 244 AVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSK 323 (404)
T ss_dssp TTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHT
T ss_pred cchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECCCCCcHHHHHHHHHHHHHh
Confidence 011122222 22234333 3344433 7899999999999999987654 3 4899876889999999999997
Q ss_pred CCCCCCCCC-CCCcc--ccccccccchhhhhhcCCcccccHHHHHHHHHHHHHHcC
Q 040253 271 YPEFNVPTE-FEDVD--ENMKNMLFSSKKLTDLGFKFKYSLDDMFTGAVDTCRAKG 323 (338)
Q Consensus 271 ~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~lg~~~~~~~~~~i~~~~~~~~~~~ 323 (338)
+|. +.+.. .+... .......+|++++++|||+|+++++++++++++|++...
T Consensus 324 ~g~-~~~~~~~p~~~~~~~~~~~~~d~~k~~~LG~~p~~~~~~~l~~~~~~~~~~~ 378 (404)
T 1i24_A 324 LGL-DVKKMTVPNPRVEAEEHYYNAKHTKLMELGLEPHYLSDSLLDSLLNFAVQFK 378 (404)
T ss_dssp TTC-CCCEEEECCSSCSCSSCCCCBCCCHHHHTTCCCCCCCHHHHHHHHHHHHHTG
T ss_pred hCC-CccccccCcccCccccceEecCHHHHHHcCCCcCcCHHHHHHHHHHHHHhhh
Confidence 553 22211 11111 122345678888888999999999999999999997543
No 37
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=100.00 E-value=4.5e-41 Score=292.98 Aligned_cols=265 Identities=15% Similarity=0.142 Sum_probs=207.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
|||+|||||| ||||++++++|+++|++|++++|++.+...+.. .+++++.+|++|.+ +.++|+|||
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~-----~~~~d~vi~ 69 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA--------SGAEPLLWPGEEPS-----LDGVTHLLI 69 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH--------TTEEEEESSSSCCC-----CTTCCEEEE
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh--------CCCeEEEecccccc-----cCCCCEEEE
Confidence 5689999998 999999999999999999999998876655443 57899999999854 678999999
Q ss_pred ecccCCCCCCCccchhhhhhhHHHHHHHHHHHh--CCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCc
Q 040253 84 LATPMDFESKDPENEVIRPTINGMVSIMRACKN--AKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGW 161 (338)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~ 161 (338)
+|+..... . ..+.++++++++ .+ +++|||+||.++|+ .....+++|++ +..|.+
T Consensus 70 ~a~~~~~~--~----------~~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg--~~~~~~~~E~~---------~~~p~~ 125 (286)
T 3ius_A 70 STAPDSGG--D----------PVLAALGDQIAARAAQ-FRWVGYLSTTAVYG--DHDGAWVDETT---------PLTPTA 125 (286)
T ss_dssp CCCCBTTB--C----------HHHHHHHHHHHHTGGG-CSEEEEEEEGGGGC--CCTTCEECTTS---------CCCCCS
T ss_pred CCCccccc--c----------HHHHHHHHHHHhhcCC-ceEEEEeecceecC--CCCCCCcCCCC---------CCCCCC
Confidence 99864421 1 125788899988 55 78999999999998 44556788887 556788
Q ss_pred hHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCC-CCCCCccccHHHHHHHHHH
Q 040253 162 MYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYP-IIKQGQFVHLDDLCSAHIF 240 (338)
Q Consensus 162 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~D~a~~~~~ 240 (338)
.|+.+|+.+|++++.+ .+++++++||+++||++.... .....+....+. .+..++|+|++|+|++++.
T Consensus 126 ~Y~~sK~~~E~~~~~~---~~~~~~ilRp~~v~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~ 194 (286)
T 3ius_A 126 ARGRWRVMAEQQWQAV---PNLPLHVFRLAGIYGPGRGPF--------SKLGKGGIRRIIKPGQVFSRIHVEDIAQVLAA 194 (286)
T ss_dssp HHHHHHHHHHHHHHHS---TTCCEEEEEECEEEBTTBSSS--------TTSSSSCCCEEECTTCCBCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh---cCCCEEEEeccceECCCchHH--------HHHhcCCccccCCCCcccceEEHHHHHHHHHH
Confidence 9999999999999875 599999999999999985431 111223333222 2333789999999999999
Q ss_pred hhcCCCCCCceEEe-cCCCCHHHHHHHHHHhCCCCCCCCCCCCcc---cc------ccccccchhhhhh-cCCcccc-cH
Q 040253 241 LFEHPNAKGRYICS-SHPATILELAKFLREKYPEFNVPTEFEDVD---EN------MKNMLFSSKKLTD-LGFKFKY-SL 308 (338)
Q Consensus 241 ~l~~~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~---~~------~~~~~~~~~~~~~-lg~~~~~-~~ 308 (338)
+++++..+++||++ ++++|+.|+++.+.+.+|.. .+..+...+ .. .....+|++++++ |||+|++ ++
T Consensus 195 ~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~ 273 (286)
T 3ius_A 195 SMARPDPGAVYNVCDDEPVPPQDVIAYAAELQGLP-LPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKYPNY 273 (286)
T ss_dssp HHHSCCTTCEEEECCSCCBCHHHHHHHHHHHHTCC-CCCEEEGGGSCCCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSH
T ss_pred HHhCCCCCCEEEEeCCCCccHHHHHHHHHHHcCCC-CCcccchhhhccChhHHHhhcCCceeehHHHHHHhCCCCCcCCH
Confidence 99998877799984 67899999999999998753 222211111 11 1456789999998 9999999 69
Q ss_pred HHHHHHHHHH
Q 040253 309 DDMFTGAVDT 318 (338)
Q Consensus 309 ~~~i~~~~~~ 318 (338)
+++|+++++.
T Consensus 274 ~e~l~~~~~~ 283 (286)
T 3ius_A 274 RVGLEALQAD 283 (286)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 9999999864
No 38
>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*
Probab=100.00 E-value=1.8e-42 Score=306.67 Aligned_cols=287 Identities=16% Similarity=0.183 Sum_probs=219.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC--CccEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--GCTGVF 82 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi 82 (338)
+|+||||||+||||++++++|+++|++|++++|+. .+|++|.+++.++++ ++|+||
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------------~~D~~d~~~~~~~~~~~~~d~vi 60 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------------ELNLLDSRAVHDFFASERIDQVY 60 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------------TCCTTCHHHHHHHHHHHCCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------------cCCccCHHHHHHHHHhcCCCEEE
Confidence 57999999999999999999999999999887752 269999999999998 999999
Q ss_pred EecccCCCC--CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCC-
Q 040253 83 HLATPMDFE--SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMT- 159 (338)
Q Consensus 83 ~~a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p- 159 (338)
|+|+..... ........++.|+.++.++++++++.+ +++|||+||.++|+ .....+++|+++.. .+..|
T Consensus 61 h~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~SS~~vyg--~~~~~~~~E~~~~~-----~~~~p~ 132 (321)
T 1e6u_A 61 LAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND-VNKLLFLGSSCIYP--KLAKQPMAESELLQ-----GTLEPT 132 (321)
T ss_dssp ECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEECCGGGSC--TTCCSSBCGGGTTS-----SCCCGG
T ss_pred EcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCeEEEEccHHHcC--CCCCCCcCcccccc-----CCCCCC
Confidence 999965310 112335788999999999999999988 88999999999998 33455677775321 02234
Q ss_pred CchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCC--ChhHHHhhhhc-----cc-CCC-CCCCCCC-Cccc
Q 040253 160 GWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSM--PPSLITALSPI-----TR-NEA-HYPIIKQ-GQFV 229 (338)
Q Consensus 160 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~-----~~-~~~-~~~~~~~-~~~i 229 (338)
.+.|+.+|..+|.+++.++++++++++++||+.+|||+..... ...+..++... .+ .+. .++.+.. ++|+
T Consensus 133 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i 212 (321)
T 1e6u_A 133 NEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFL 212 (321)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEE
T ss_pred CCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeE
Confidence 3589999999999999998888999999999999999865321 11111111111 12 222 2333333 7899
Q ss_pred cHHHHHHHHHHhhcCCCC---------CCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCC-CCCccccccccccchhhhh
Q 040253 230 HLDDLCSAHIFLFEHPNA---------KGRYIC-SSHPATILELAKFLREKYPEFNVPTE-FEDVDENMKNMLFSSKKLT 298 (338)
Q Consensus 230 ~v~D~a~~~~~~l~~~~~---------~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 298 (338)
|++|+|++++.+++++.. +++||+ +++++|+.|+++.+.+.+|.. .+.. ....+.......+|+++++
T Consensus 213 ~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~d~~k~~ 291 (321)
T 1e6u_A 213 HVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYK-GRVVFDASKPDGTPRKLLDVTRLH 291 (321)
T ss_dssp EHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCC-SEEEEETTSCCCCSBCCBCCHHHH
T ss_pred EHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCC-CceEeCCCCCCCcccccCCHHHHH
Confidence 999999999999987654 478998 567899999999999998742 2111 1112233445678999998
Q ss_pred hcCCcccccHHHHHHHHHHHHHHc
Q 040253 299 DLGFKFKYSLDDMFTGAVDTCRAK 322 (338)
Q Consensus 299 ~lg~~~~~~~~~~i~~~~~~~~~~ 322 (338)
+|||+|+++++++|+++++|++++
T Consensus 292 ~lG~~p~~~~~~~l~~~~~~~~~~ 315 (321)
T 1e6u_A 292 QLGWYHEISLEAGLASTYQWFLEN 315 (321)
T ss_dssp HTTCCCCCCHHHHHHHHHHHHHHT
T ss_pred hcCCccCCcHHHHHHHHHHHHHHH
Confidence 899999999999999999999875
No 39
>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=100.00 E-value=1.4e-41 Score=307.51 Aligned_cols=306 Identities=16% Similarity=0.152 Sum_probs=227.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcH--HHHHHHhcCCC--CCCcEEEEecccCCCCCchhhhCC--c
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNK--KKVKHLLELPK--ASTHLTLWKADLAEEGNFDEPIRG--C 78 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~--~ 78 (338)
+|+||||||+||||++++++|+++|++|++++|++... ..++.+..... ...+++++.+|++|.+++.+++++ +
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 103 (375)
T 1t2a_A 24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 103 (375)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence 37999999999999999999999999999999976531 11111100000 114789999999999999888874 7
Q ss_pred cEEEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCc---cEEEEecCceeeeccCCCCCCcCCCCCCchhhhh
Q 040253 79 TGVFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTV---RRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVR 154 (338)
Q Consensus 79 d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~ 154 (338)
|+|||+|+..... ........+++|+.++.++++++...+ + ++|||+||.++|+ .....+++|++
T Consensus 104 d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~~~~iv~~SS~~~~~--~~~~~~~~E~~-------- 172 (375)
T 1t2a_A 104 TEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCG-LINSVKFYQASTSELYG--KVQEIPQKETT-------- 172 (375)
T ss_dssp SEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGTC--SCSSSSBCTTS--------
T ss_pred CEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCccceEEEecchhhhC--CCCCCCCCccC--------
Confidence 9999999965421 112344678999999999999999887 5 7999999999997 33345778876
Q ss_pred hccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCCh-hHHHhh-hhcccCCC--CCCCCCC-Cccc
Q 040253 155 SVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPP-SLITAL-SPITRNEA--HYPIIKQ-GQFV 229 (338)
Q Consensus 155 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~-~~~~~~~~--~~~~~~~-~~~i 229 (338)
+..|.+.|+.+|.++|.+++.++++++++++++||+++|||+....... .+...+ ....+... .++.+.. ++|+
T Consensus 173 -~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i 251 (375)
T 1t2a_A 173 -PFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWG 251 (375)
T ss_dssp -CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCE
T ss_pred -CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeE
Confidence 4457789999999999999999988899999999999999986543221 111111 11223322 2333333 7899
Q ss_pred cHHHHHHHHHHhhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCC------CCCC------------CCC---ccccc
Q 040253 230 HLDDLCSAHIFLFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFN------VPTE------------FED---VDENM 287 (338)
Q Consensus 230 ~v~D~a~~~~~~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~------~~~~------------~~~---~~~~~ 287 (338)
|++|+|++++.+++++. .++||+ +++++|+.|+++.+.+.+|... +|.. +.. .+...
T Consensus 252 ~v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (375)
T 1t2a_A 252 HAKDYVEAMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEV 330 (375)
T ss_dssp EHHHHHHHHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCC
T ss_pred EHHHHHHHHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccc
Confidence 99999999999998765 578988 5678999999999999987521 1111 000 11223
Q ss_pred cccccchhhhhh-cCCcccccHHHHHHHHHHHHHHcC
Q 040253 288 KNMLFSSKKLTD-LGFKFKYSLDDMFTGAVDTCRAKG 323 (338)
Q Consensus 288 ~~~~~~~~~~~~-lg~~~~~~~~~~i~~~~~~~~~~~ 323 (338)
....+|++++++ |||+|+++++++|+++++|+++..
T Consensus 331 ~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~ 367 (375)
T 1t2a_A 331 DFLQGDCTKAKQKLNWKPRVAFDELVREMVHADVELM 367 (375)
T ss_dssp CBCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred hhhcCCHHHHHHhcCCCccCCHHHHHHHHHHHHHHhh
Confidence 345679999987 999999999999999999998753
No 40
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=100.00 E-value=7.4e-43 Score=304.39 Aligned_cols=270 Identities=18% Similarity=0.140 Sum_probs=213.5
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC--CccEEEE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--GCTGVFH 83 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi~ 83 (338)
|+|||||||||||++++++|+++|++|++++|. .+|++|.+.+.++++ ++|+|||
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~D~~d~~~~~~~~~~~~~d~vi~ 62 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKK-----------------------LLDITNISQVQQVVQEIRPHIIIH 62 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTT-----------------------TSCTTCHHHHHHHHHHHCCSEEEE
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEeccc-----------------------ccCCCCHHHHHHHHHhcCCCEEEE
Confidence 499999999999999999999999999999982 369999999999988 7999999
Q ss_pred ecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCch
Q 040253 84 LATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWM 162 (338)
Q Consensus 84 ~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~ 162 (338)
+|+..... ........++.|+.++.++++++++.+ + +|||+||.++|+ .....+++|++ +..|.+.
T Consensus 63 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~~v~~SS~~vy~--~~~~~~~~E~~---------~~~p~~~ 129 (287)
T 3sc6_A 63 CAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVG-A-KLVYISTDYVFQ--GDRPEGYDEFH---------NPAPINI 129 (287)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSC--CCCSSCBCTTS---------CCCCCSH
T ss_pred CCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchhhhcC--CCCCCCCCCCC---------CCCCCCH
Confidence 99976521 123456889999999999999999988 5 799999999997 44557788887 4568889
Q ss_pred HHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhc-ccCCCCCCCCCCCccccHHHHHHHHHHh
Q 040253 163 YFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPI-TRNEAHYPIIKQGQFVHLDDLCSAHIFL 241 (338)
Q Consensus 163 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 241 (338)
|+.+|..+|.+++.+ ..+++++||+.+|||+... .+....... .+..........++++|++|+|++++.+
T Consensus 130 Y~~sK~~~E~~~~~~----~~~~~ilR~~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 201 (287)
T 3sc6_A 130 YGASKYAGEQFVKEL----HNKYFIVRTSWLYGKYGNN----FVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKL 201 (287)
T ss_dssp HHHHHHHHHHHHHHH----CSSEEEEEECSEECSSSCC----HHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh----CCCcEEEeeeeecCCCCCc----HHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHH
Confidence 999999999999765 4478999999999997543 111222211 2332222223347899999999999999
Q ss_pred hcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCC-C-----CCccccccccccchhhhhhcCCcccccHHHHHHH
Q 040253 242 FEHPNAKGRYIC-SSHPATILELAKFLREKYPEFNVPTE-F-----EDVDENMKNMLFSSKKLTDLGFKFKYSLDDMFTG 314 (338)
Q Consensus 242 l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~i~~ 314 (338)
++++. +++||+ +++++|+.|+++.+.+.+|.. .+.. . ...........+|++++++|||.|.++++++|++
T Consensus 202 ~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lg~~p~~~~~~~l~~ 279 (287)
T 3sc6_A 202 IHTSL-YGTYHVSNTGSCSWFEFAKKIFSYANMK-VNVLPVSTEEFGAAAARPKYSIFQHNMLRLNGFLQMPSWEEGLER 279 (287)
T ss_dssp HTSCC-CEEEECCCBSCEEHHHHHHHHHHHHTCC-CEEEEECHHHHCCSSCCCSBCCBCCHHHHHTTCCCCCBHHHHHHH
T ss_pred HhCCC-CCeEEEcCCCcccHHHHHHHHHHHcCCC-cceeeeehhhcCcccCCCCcccccHHHHHhhCCCCCccHHHHHHH
Confidence 99877 779998 457899999999999998752 2111 1 1112334556789999999999999999999999
Q ss_pred HHHHHHH
Q 040253 315 AVDTCRA 321 (338)
Q Consensus 315 ~~~~~~~ 321 (338)
+++|+++
T Consensus 280 ~~~~~~~ 286 (287)
T 3sc6_A 280 FFIETKS 286 (287)
T ss_dssp HHHHTC-
T ss_pred HHHHHhc
Confidence 9999865
No 41
>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*
Probab=100.00 E-value=6e-42 Score=302.84 Aligned_cols=294 Identities=20% Similarity=0.264 Sum_probs=222.4
Q ss_pred EEEEeCCchhhHHHHHHHHHHC--CCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC--CccEEE
Q 040253 7 TVCVTGASGFIGSWLIMRLLER--GYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--GCTGVF 82 (338)
Q Consensus 7 ~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi 82 (338)
+||||||+||||++++++|+++ |++|++++|+.... .+++++.+|++|++++.++++ ++|+||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-------------~~~~~~~~D~~d~~~~~~~~~~~~~d~vi 67 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-------------GGIKFITLDVSNRDEIDRAVEKYSIDAIF 67 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-------------TTCCEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-------------cCceEEEecCCCHHHHHHHHhhcCCcEEE
Confidence 5899999999999999999998 89999999875432 145788999999999999887 899999
Q ss_pred EecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCch
Q 040253 83 HLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWM 162 (338)
Q Consensus 83 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~ 162 (338)
|+|+.............++.|+.++.++++++++.+ +++|||+||.++|+... ...+.+|++ +..|.+.
T Consensus 68 h~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~-~~~~~~e~~---------~~~p~~~ 136 (317)
T 3ajr_A 68 HLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHR-VEKVVIPSTIGVFGPET-PKNKVPSIT---------ITRPRTM 136 (317)
T ss_dssp ECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTT-CCEEEEEEEGGGCCTTS-CSSSBCSSS---------CCCCCSH
T ss_pred ECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcC-CCEEEEecCHHHhCCCC-CCCCccccc---------cCCCCch
Confidence 999864321122345788999999999999999988 88999999999997321 223556665 4457889
Q ss_pred HHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCC--CCh-hHHHhhhhcccCC-CCCCCC-CCCccccHHHHHHH
Q 040253 163 YFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSS--MPP-SLITALSPITRNE-AHYPII-KQGQFVHLDDLCSA 237 (338)
Q Consensus 163 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~--~~~-~~~~~~~~~~~~~-~~~~~~-~~~~~i~v~D~a~~ 237 (338)
|+.+|.++|.+++.+++++|++++++||+.+||+...+. ... ....+.....+.. ..+..+ ..++++|++|+|++
T Consensus 137 Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a 216 (317)
T 3ajr_A 137 FGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKA 216 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHH
Confidence 999999999999999888899999999999999864322 111 1111122222222 222222 33789999999999
Q ss_pred HHHhhcCCCC----CCceEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCccc---cccccccchhhhhh-cCCcccccHH
Q 040253 238 HIFLFEHPNA----KGRYICSSHPATILELAKFLREKYPEFNVPTEFEDVDE---NMKNMLFSSKKLTD-LGFKFKYSLD 309 (338)
Q Consensus 238 ~~~~l~~~~~----~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-lg~~~~~~~~ 309 (338)
++.+++++.. +++||+++..+|+.|+++.+.+.+|...++.... ... ......+|++++++ |||+|+++++
T Consensus 217 ~~~~l~~~~~~~~~g~~~~i~~~~~s~~e~~~~i~~~~~~~~i~~~~~-~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~~ 295 (317)
T 3ajr_A 217 LVDLYEADRDKLVLRNGYNVTAYTFTPSELYSKIKERIPEFEIEYKED-FRDKIAATWPESLDSSEASNEWGFSIEYDLD 295 (317)
T ss_dssp HHHHHHCCGGGCSSCSCEECCSEEECHHHHHHHHHTTCCSCCEEECCC-HHHHHHTTSCSCBCCHHHHHHHCCCCCCCHH
T ss_pred HHHHHhCCccccccCceEecCCccccHHHHHHHHHHHCCccccccccc-cchhhccccccccCHHHHHHHcCCCCCCCHH
Confidence 9999987643 3689997778999999999999987433222111 111 11123578899987 9999999999
Q ss_pred HHHHHHHHHHHHcCCC
Q 040253 310 DMFTGAVDTCRAKGLL 325 (338)
Q Consensus 310 ~~i~~~~~~~~~~~~~ 325 (338)
++|+++++|++++.-.
T Consensus 296 ~~l~~~~~~~~~~~~~ 311 (317)
T 3ajr_A 296 RTIDDMIDHISEKLGI 311 (317)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHhhhcc
Confidence 9999999999876443
No 42
>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2
Probab=100.00 E-value=2.7e-41 Score=305.27 Aligned_cols=316 Identities=16% Similarity=0.194 Sum_probs=226.1
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcH--HHHHHHhcCC-CCCCcEEEEecccCCCCCchhhhCC--cc
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNK--KKVKHLLELP-KASTHLTLWKADLAEEGNFDEPIRG--CT 79 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~--~d 79 (338)
||+||||||+||||++++++|+++|++|++++|+.... ..+..+.... ....+++++.+|++|.+++.+++++ +|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 57999999999999999999999999999999976531 1122111100 0124789999999999999888874 79
Q ss_pred EEEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCc---cEEEEecCceeeeccCCCCCCcCCCCCCchhhhhh
Q 040253 80 GVFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTV---RRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRS 155 (338)
Q Consensus 80 ~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~ 155 (338)
+|||+|+..... ..+.....+++|+.++.++++++...+ + ++|||+||.++|+ .....+++|++
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~~iv~~SS~~v~g--~~~~~~~~E~~--------- 148 (372)
T 1db3_A 81 EVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLG-LEKKTRFYQASTSELYG--LVQEIPQKETT--------- 148 (372)
T ss_dssp EEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTT-CTTTCEEEEEEEGGGGT--TCCSSSBCTTS---------
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CCCCcEEEEeCChhhhC--CCCCCCCCccC---------
Confidence 999999965422 223345678999999999999999887 6 7999999999997 33345778876
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCCh-hHHHhh-hhcccCCC--CCCCCCC-Ccccc
Q 040253 156 VKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPP-SLITAL-SPITRNEA--HYPIIKQ-GQFVH 230 (338)
Q Consensus 156 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~-~~~~~~~~--~~~~~~~-~~~i~ 230 (338)
+..|.+.|+.+|.++|.+++.++++++++++++|++++|||+....... .+...+ ....+... .++.+.+ ++|+|
T Consensus 149 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~ 228 (372)
T 1db3_A 149 PFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGH 228 (372)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEE
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeE
Confidence 4457789999999999999999998899999999999999986543221 111122 11223322 2333333 78999
Q ss_pred HHHHHHHHHHhhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCC------CCCC----------------------CC
Q 040253 231 LDDLCSAHIFLFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFN------VPTE----------------------FE 281 (338)
Q Consensus 231 v~D~a~~~~~~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~------~~~~----------------------~~ 281 (338)
++|+|++++.+++++. +++||+ +++++|+.|+++.+.+.+|... +|.+ +.
T Consensus 229 v~Dva~a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (372)
T 1db3_A 229 AKDYVKMQWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVD 307 (372)
T ss_dssp HHHHHHHHHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEEC
T ss_pred HHHHHHHHHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeecc
Confidence 9999999999998764 578987 5678999999999999987411 1110 00
Q ss_pred C---ccccccccccchhhhhh-cCCcccccHHHHHHHHHHHHHHcCCCCCccCCCc
Q 040253 282 D---VDENMKNMLFSSKKLTD-LGFKFKYSLDDMFTGAVDTCRAKGLLPLLCENHV 333 (338)
Q Consensus 282 ~---~~~~~~~~~~~~~~~~~-lg~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 333 (338)
. .+.......+|++++++ |||+|+++++++|+++++|++++.......+.|.
T Consensus 308 ~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~l~e~l~~~~~~~~~~~~~~~~~~~~~ 363 (372)
T 1db3_A 308 PRYFRPAEVETLLGDPTKAHEKLGWKPEITLREMVSEMVANDLEAAKKHSLLKSHG 363 (372)
T ss_dssp GGGCCCCC-CCCCBCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHHHHTTC------
T ss_pred ccccCCCchhhhccCHHHHHHHhCCccccCHHHHHHHHHHHHHHhhhccchhhhcC
Confidence 0 11222345679999987 9999999999999999999987654444444443
No 43
>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*
Probab=100.00 E-value=2.8e-41 Score=301.24 Aligned_cols=303 Identities=19% Similarity=0.218 Sum_probs=220.2
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc-HHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC--CccEEE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN-KKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--GCTGVF 82 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~vi 82 (338)
|+||||||+||||++++++|+++|++|++++|.... ......+.... ..+++++.+|++|++++.++++ ++|+||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vi 78 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG--GKHPTFVEGDIRNEALMTEILHDHAIDTVI 78 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH--TSCCEEEECCTTCHHHHHHHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc--CCcceEEEccCCCHHHHHHHhhccCCCEEE
Confidence 489999999999999999999999999999874322 11111111100 1357899999999998888886 599999
Q ss_pred EecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCc
Q 040253 83 HLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGW 161 (338)
Q Consensus 83 ~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~ 161 (338)
|+|+..... ........++.|+.++.++++++++.+ +++|||+||.++|+ .....+++|+.+ ..++.+
T Consensus 79 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~g--~~~~~~~~e~~~--------~~~~~~ 147 (338)
T 1udb_A 79 HFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAAN-VKNFIFSSSATVYG--DNPKIPYVESFP--------TGTPQS 147 (338)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGC--SCCSSSBCTTSC--------CCCCSS
T ss_pred ECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEEccHHHhC--CCCCCCcCcccC--------CCCCCC
Confidence 999864311 112234678999999999999998888 88999999999997 334456777762 112377
Q ss_pred hHHHHHHHHHHHHHHHHHHc-CccEEEEcCCceeCCCCCC------C-CCh-hHHHhhhhcccCCC---------CCCCC
Q 040253 162 MYFVSKTLAEQAAWKFAEEN-NIDFISIIPSLVVGPFLTS------S-MPP-SLITALSPITRNEA---------HYPII 223 (338)
Q Consensus 162 ~Y~~sK~~~E~~~~~~~~~~-~~~~~ilRp~~v~G~~~~~------~-~~~-~~~~~~~~~~~~~~---------~~~~~ 223 (338)
.|+.+|.++|.+++.+++++ +++++++||+++|||.... . ... .+........+... ..+.+
T Consensus 148 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 227 (338)
T 1udb_A 148 PYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDG 227 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSS
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCC
Confidence 99999999999999998887 8999999999999985311 1 011 11111111111111 11122
Q ss_pred CC-CccccHHHHHHHHHHhhcCC--CCC-CceEEe-cCCCCHHHHHHHHHHhCCCCCCCCCC-CCccccccccccchhhh
Q 040253 224 KQ-GQFVHLDDLCSAHIFLFEHP--NAK-GRYICS-SHPATILELAKFLREKYPEFNVPTEF-EDVDENMKNMLFSSKKL 297 (338)
Q Consensus 224 ~~-~~~i~v~D~a~~~~~~l~~~--~~~-~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 297 (338)
.+ ++|+|++|+|++++.++++. ..+ ++||++ ++++|+.|+++.+.+.+|. +++... ...+.......+|++++
T Consensus 228 ~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~-~~~~~~~~~~~~~~~~~~~d~~k~ 306 (338)
T 1udb_A 228 TGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGK-PVNYHFAPRREGDLPAYWADASKA 306 (338)
T ss_dssp SCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTS-CCCEEEECCCTTCCSBCCBCCHHH
T ss_pred ceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCC-CCcceeCCCCCCchhhhhcCHHHH
Confidence 23 68999999999999998753 233 589984 6789999999999998874 333221 11223344567899999
Q ss_pred hh-cCCcccccHHHHHHHHHHHHHHc
Q 040253 298 TD-LGFKFKYSLDDMFTGAVDTCRAK 322 (338)
Q Consensus 298 ~~-lg~~~~~~~~~~i~~~~~~~~~~ 322 (338)
++ |||+|+++++++|+++++|++++
T Consensus 307 ~~~lG~~p~~~l~~~l~~~~~w~~~~ 332 (338)
T 1udb_A 307 DRELNWRVTRTLDEMAQDTWHWQSRH 332 (338)
T ss_dssp HHHHCCCCCCCHHHHHHHHHHHHHHC
T ss_pred HHHcCCCcCCCHHHHHHHHHHHHHhc
Confidence 76 99999999999999999999875
No 44
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=100.00 E-value=6e-42 Score=301.83 Aligned_cols=290 Identities=15% Similarity=0.168 Sum_probs=210.6
Q ss_pred EEEEeCCchhhHHHHHHHHHHCC-CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC-----ccE
Q 040253 7 TVCVTGASGFIGSWLIMRLLERG-YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG-----CTG 80 (338)
Q Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~d~ 80 (338)
+||||||+||||++++++|+++| ++|++++|++.... ...+ +++. +.+|++|.+.+.+++++ +|+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~~-------~~~~-~~~d~~~~~~~~~~~~~~~~~~~d~ 71 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVNL-------VDLN-IADYMDKEDFLIQIMAGEEFGDVEA 71 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGG-GHHH-------HTSC-CSEEEEHHHHHHHHHTTCCCSSCCE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCch-hhhc-------Ccce-eccccccHHHHHHHHhccccCCCcE
Confidence 58999999999999999999999 99999999765431 1111 1223 77899998888888875 999
Q ss_pred EEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCC
Q 040253 81 VFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTG 160 (338)
Q Consensus 81 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~ 160 (338)
|||+|+..... .......++.|+.++.++++++++.+ + +|||+||.++|+ .....+++|++ +..|.
T Consensus 72 vi~~a~~~~~~-~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~g--~~~~~~~~E~~---------~~~p~ 137 (310)
T 1eq2_A 72 IFHEGACSSTT-EWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYG--GRTSDFIESRE---------YEKPL 137 (310)
T ss_dssp EEECCSCCCTT-CCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGT--TCCSCBCSSGG---------GCCCS
T ss_pred EEECcccccCc-ccCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEeeHHHhC--CCCCCCCCCCC---------CCCCC
Confidence 99999976542 33455789999999999999999988 7 999999999997 33344677776 45678
Q ss_pred chHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCC--CChhHHHhhh-hcccCCC-CCCCC-C-CCccccHHHH
Q 040253 161 WMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSS--MPPSLITALS-PITRNEA-HYPII-K-QGQFVHLDDL 234 (338)
Q Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~-~~~~~~~-~~~~~-~-~~~~i~v~D~ 234 (338)
+.|+.+|..+|.+++.+++++|++++++||+++|||+.... ....+...+. ...+... .++.+ . .++++|++|+
T Consensus 138 ~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dv 217 (310)
T 1eq2_A 138 NVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDV 217 (310)
T ss_dssp SHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHH
Confidence 89999999999999999888899999999999999986421 1111211111 1223332 23333 2 4689999999
Q ss_pred HHHHHHhhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCCCCCccc-----cccccccchhhhhhcCC-ccccc
Q 040253 235 CSAHIFLFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFNVPTEFEDVDE-----NMKNMLFSSKKLTDLGF-KFKYS 307 (338)
Q Consensus 235 a~~~~~~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~lg~-~~~~~ 307 (338)
|++++.+++++. +++||+ +++++|+.|+++.+.+.+|...+ .....+. .......|++++++||| .|.++
T Consensus 218 a~~~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~ 294 (310)
T 1eq2_A 218 ADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKGQI--EYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKT 294 (310)
T ss_dssp HHHHHHHHHHCC-CEEEEESCSCCBCHHHHHHHC-----------------------CCCSCCBCCHHHHHTTCCCCCCC
T ss_pred HHHHHHHHhcCC-CCeEEEeCCCccCHHHHHHHHHHHcCCCCc--eeCCCChhhhcccccccccchHHHHhcCCCCCCCC
Confidence 999999998876 779998 46889999999999999875311 1111111 12345678889988999 78889
Q ss_pred HHHHHHHHHHHHHHc
Q 040253 308 LDDMFTGAVDTCRAK 322 (338)
Q Consensus 308 ~~~~i~~~~~~~~~~ 322 (338)
++++|+++++|++++
T Consensus 295 l~~~l~~~~~~~~~~ 309 (310)
T 1eq2_A 295 VAEGVTEYMAWLNRD 309 (310)
T ss_dssp HHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998653
No 45
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=100.00 E-value=7.6e-41 Score=299.14 Aligned_cols=301 Identities=16% Similarity=0.150 Sum_probs=228.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHH--HHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC--ccE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKK--KVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG--CTG 80 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~ 80 (338)
+|+||||||+||||++++++|+++|++|++++|++.... .+..+. ..++++++.+|++|.+++.+++++ +|+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~----~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 78 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELG----IENDVKIIHMDLLEFSNIIRTIEKVQPDE 78 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTT----CTTTEEECCCCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhcc----ccCceeEEECCCCCHHHHHHHHHhcCCCE
Confidence 579999999999999999999999999999999875432 222211 114789999999999999988874 699
Q ss_pred EEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCc-cEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccC
Q 040253 81 VFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTV-RRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKM 158 (338)
Q Consensus 81 vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~ 158 (338)
|||+|+..... ..+.....+++|+.++.++++++...+ + ++|||+||.++|| .....+++|+. +..
T Consensus 79 vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~-~~~~iv~~SS~~vyg--~~~~~~~~e~~---------~~~ 146 (345)
T 2z1m_A 79 VYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVK-PDTKFYQASTSEMFG--KVQEIPQTEKT---------PFY 146 (345)
T ss_dssp EEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHC-TTCEEEEEEEGGGGC--SCSSSSBCTTS---------CCC
T ss_pred EEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhC-CCceEEEEechhhcC--CCCCCCCCccC---------CCC
Confidence 99999965421 123455789999999999999999877 5 7999999999998 33445677776 445
Q ss_pred CCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCC-hhHHHhh-hhcccCCC--CCCCCCC-CccccHHH
Q 040253 159 TGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMP-PSLITAL-SPITRNEA--HYPIIKQ-GQFVHLDD 233 (338)
Q Consensus 159 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~-~~~~~~~~--~~~~~~~-~~~i~v~D 233 (338)
|.+.|+.+|.++|.+++.++++++++++++|++++|||+...... ..+...+ ....+... .++.+.. ++++|++|
T Consensus 147 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~D 226 (345)
T 2z1m_A 147 PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPE 226 (345)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHH
Confidence 778999999999999999999889999999999999998643321 1111111 11123222 2233333 67999999
Q ss_pred HHHHHHHhhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCC------CCCC------------CC---Cccccccccc
Q 040253 234 LCSAHIFLFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFN------VPTE------------FE---DVDENMKNML 291 (338)
Q Consensus 234 ~a~~~~~~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~------~~~~------------~~---~~~~~~~~~~ 291 (338)
+|++++.+++++. .++||+ +++++|+.|+++.+.+.+|... +|.. .. ..+.......
T Consensus 227 va~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (345)
T 2z1m_A 227 YVEAMWLMMQQPE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILV 305 (345)
T ss_dssp HHHHHHHHHTSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCC
T ss_pred HHHHHHHHHhCCC-CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceee
Confidence 9999999998764 478988 5678999999999999987521 1110 00 0112233456
Q ss_pred cchhhhhh-cCCcccccHHHHHHHHHHHHHHc
Q 040253 292 FSSKKLTD-LGFKFKYSLDDMFTGAVDTCRAK 322 (338)
Q Consensus 292 ~~~~~~~~-lg~~~~~~~~~~i~~~~~~~~~~ 322 (338)
.|++++++ |||+|+++++++|+++++|++++
T Consensus 306 ~d~~k~~~~lG~~p~~~~~~~l~~~~~~~~~~ 337 (345)
T 2z1m_A 306 GNPEKAMKKLGWKPRTTFDELVEIMMEADLKR 337 (345)
T ss_dssp BCCHHHHHHHCCCCCSCHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHcCCcccCCHHHHHHHHHHHHHHH
Confidence 78999987 99999999999999999999875
No 46
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=100.00 E-value=7.3e-41 Score=297.88 Aligned_cols=296 Identities=22% Similarity=0.216 Sum_probs=218.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC--ccEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG--CTGV 81 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~v 81 (338)
.||+||||||+||||++++++|+++|++|++++|+...... .+.. .++++++.+|++|.+++.+++++ +|+|
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~l~~----~~~~~~~~~Dl~d~~~~~~~~~~~~~D~v 93 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRRE--HLKD----HPNLTFVEGSIADHALVNQLIGDLQPDAV 93 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG--GSCC----CTTEEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchh--hHhh----cCCceEEEEeCCCHHHHHHHHhccCCcEE
Confidence 46899999999999999999999999999999997543211 0100 14789999999999999999987 9999
Q ss_pred EEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccC-CCCCCcCCCCCCchhhhhhccCCC
Q 040253 82 FHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEE-HRKPVYDETSWSDLDFVRSVKMTG 160 (338)
Q Consensus 82 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~-~~~~~~~e~~~~~~~~~~~~~~p~ 160 (338)
||+|+.......... . +++|+.++.++++++...+ +++|||+||.++|+... ....+++|++ .|.
T Consensus 94 ih~A~~~~~~~~~~~-~-~~~N~~~~~~l~~a~~~~~-~~~iV~~SS~~~~g~~~~~~~~~~~E~~-----------~p~ 159 (333)
T 2q1w_A 94 VHTAASYKDPDDWYN-D-TLTNCVGGSNVVQAAKKNN-VGRFVYFQTALCYGVKPIQQPVRLDHPR-----------NPA 159 (333)
T ss_dssp EECCCCCSCTTCHHH-H-HHHHTHHHHHHHHHHHHTT-CSEEEEEEEGGGGCSCCCSSSBCTTSCC-----------CCT
T ss_pred EECceecCCCccCCh-H-HHHHHHHHHHHHHHHHHhC-CCEEEEECcHHHhCCCcccCCCCcCCCC-----------CCC
Confidence 999997553211222 3 8999999999999999988 88999999999996211 1111566664 255
Q ss_pred -chHHHHHHHHHHHHHH-HHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHH
Q 040253 161 -WMYFVSKTLAEQAAWK-FAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAH 238 (338)
Q Consensus 161 -~~Y~~sK~~~E~~~~~-~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~ 238 (338)
+.|+.+|.++|.+++. ++ +++++||+++|||+........+.. ....+. ..+.....++++|++|+|+++
T Consensus 160 ~~~Y~~sK~~~E~~~~~s~~-----~~~ilR~~~v~gp~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~i~v~Dva~ai 231 (333)
T 2q1w_A 160 NSSYAISKSANEDYLEYSGL-----DFVTFRLANVVGPRNVSGPLPIFFQ--RLSEGK-KCFVTKARRDFVFVKDLARAT 231 (333)
T ss_dssp TCHHHHHHHHHHHHHHHHTC-----CEEEEEESEEESTTCCSSHHHHHHH--HHHTTC-CCEEEECEECEEEHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHhhhC-----CeEEEeeceEECcCCcCcHHHHHHH--HHHcCC-eeeCCCceEeeEEHHHHHHHH
Confidence 7999999999999976 43 7999999999999832111111111 111233 223311226899999999999
Q ss_pred HHhhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCCCCCccccc-----cccccchhhhhhcCCcccccHHHHH
Q 040253 239 IFLFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFNVPTEFEDVDENM-----KNMLFSSKKLTDLGFKFKYSLDDMF 312 (338)
Q Consensus 239 ~~~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~lg~~~~~~~~~~i 312 (338)
+.+++.+. +++||+ ++..+|+.|+++.+.+.+|.. +......+... ....+|+++++++||+|+++++++|
T Consensus 232 ~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~--~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~~~l 308 (333)
T 2q1w_A 232 VRAVDGVG-HGAYHFSSGTDVAIKELYDAVVEAMALP--SYPEPEIRELGPDDAPSILLDPSRTIQDFGKIEFTPLKETV 308 (333)
T ss_dssp HHHHTTCC-CEEEECSCSCCEEHHHHHHHHHHHTTCS--SCCCCEEEECCTTSCCCCCBCCHHHHHHHCCCCCCCHHHHH
T ss_pred HHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHhCCC--CceeCCCCCcccccccccccCCHHHHHhcCCCcCCCHHHHH
Confidence 99998876 778998 457899999999999999854 22222111122 4567899999888999999999999
Q ss_pred HHHHHHHHHcCCCCCccC
Q 040253 313 TGAVDTCRAKGLLPLLCE 330 (338)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~ 330 (338)
+++++|++++|.++....
T Consensus 309 ~~~~~~~~~~~~~~~~~~ 326 (333)
T 2q1w_A 309 AAAVAYFREYGVSGGYTH 326 (333)
T ss_dssp HHHHHHHHHHCC------
T ss_pred HHHHHHHHHHCCCCCCce
Confidence 999999999998876543
No 47
>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*
Probab=100.00 E-value=1e-41 Score=306.38 Aligned_cols=292 Identities=14% Similarity=0.144 Sum_probs=220.9
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC-CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----Cc
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG-YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-----GC 78 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~ 78 (338)
+|+||||||+||||++++++|+++| ++|++++|+..... ... . .++. +.+|++|.+.+.++++ ++
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~~---~----~~~~-~~~d~~~~~~~~~~~~~~~~~~~ 116 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FVN---L----VDLN-IADYMDKEDFLIQIMAGEEFGDV 116 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GGG---T----TTSC-CSEEEEHHHHHHHHHTTCCCSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hhc---c----cCce-EeeecCcHHHHHHHHhhcccCCC
Confidence 4789999999999999999999999 99999999765421 111 1 1233 7789999888888886 59
Q ss_pred cEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccC
Q 040253 79 TGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKM 158 (338)
Q Consensus 79 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~ 158 (338)
|+|||+|+..... .......++.|+.++.++++++.+.+ + +|||+||.++|+ .....+++|++ +..
T Consensus 117 d~Vih~A~~~~~~-~~~~~~~~~~n~~~~~~ll~a~~~~~-~-r~V~~SS~~v~g--~~~~~~~~E~~---------~~~ 182 (357)
T 2x6t_A 117 EAIFHEGACSSTT-EWDGKYMMDNNYQYSKELLHYCLERE-I-PFLYASSAATYG--GRTSDFIESRE---------YEK 182 (357)
T ss_dssp CEEEECCSCCCTT-CCCHHHHHHHTHHHHHHHHHHHHHHT-C-CEEEEEEGGGGC--SCSSCCCSSGG---------GCC
T ss_pred CEEEECCcccCCc-cCCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEcchHHhC--CCCCCCcCCcC---------CCC
Confidence 9999999976542 33455789999999999999999988 7 999999999997 33344677776 456
Q ss_pred CCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCC--ChhHHHhhh-hcccCCC-CCCCCC--CCccccHH
Q 040253 159 TGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSM--PPSLITALS-PITRNEA-HYPIIK--QGQFVHLD 232 (338)
Q Consensus 159 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~-~~~~~~~-~~~~~~--~~~~i~v~ 232 (338)
|.+.|+.+|.++|.+++.+++++|++++++||+++|||+..... ...+...+. ...+... .++.+. .++|+|++
T Consensus 183 p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 262 (357)
T 2x6t_A 183 PLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVG 262 (357)
T ss_dssp CSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHH
Confidence 78899999999999999998888999999999999999865311 112222211 1223322 233332 35899999
Q ss_pred HHHHHHHHhhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCCCCCccc-----cccccccchhhhhhcCC-ccc
Q 040253 233 DLCSAHIFLFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFNVPTEFEDVDE-----NMKNMLFSSKKLTDLGF-KFK 305 (338)
Q Consensus 233 D~a~~~~~~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~lg~-~~~ 305 (338)
|+|++++.+++++. +++||+ +++++|+.|+++.+.+.+|.. +......+. ......+|++++++||| .|.
T Consensus 263 Dva~ai~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~k~~~lG~~~~~ 339 (357)
T 2x6t_A 263 DVADVNLWFLENGV-SGIFNLGTGRAESFQAVADATLAYHKKG--QIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPF 339 (357)
T ss_dssp HHHHHHHHHHHHCC-CEEEEESCSCCEEHHHHHHHHHHHHTCC--CCEEECCCGGGTTSCCSBCCCCCHHHHHTTCCCCC
T ss_pred HHHHHHHHHHhcCC-CCeEEecCCCcccHHHHHHHHHHHcCCC--CceecCCCcccccccccccccCHHHHHHcCCCCCC
Confidence 99999999998776 779998 457899999999999998854 111111111 12345678889988999 788
Q ss_pred ccHHHHHHHHHHHHHHc
Q 040253 306 YSLDDMFTGAVDTCRAK 322 (338)
Q Consensus 306 ~~~~~~i~~~~~~~~~~ 322 (338)
++++++|+++++|++++
T Consensus 340 ~~l~e~l~~~~~~~~~~ 356 (357)
T 2x6t_A 340 KTVAEGVTEYMAWLNRD 356 (357)
T ss_dssp CCHHHHHHHHHHHHC--
T ss_pred CCHHHHHHHHHHHHhhc
Confidence 89999999999999653
No 48
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=100.00 E-value=1.2e-40 Score=297.50 Aligned_cols=311 Identities=25% Similarity=0.395 Sum_probs=226.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEE-ecccCCCCCchhhhCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLW-KADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~Dl~d~~~~~~~~~~~d~vi 82 (338)
++|+||||||+||||++++++|+++|++|++++|+......+........ ..+++++ .+|++|.+++.++++++|+||
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKY-PGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHS-TTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccC-CCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 35899999999999999999999999999999997655443332211000 1468888 899999999999999999999
Q ss_pred EecccCCCCCCCccchhhhhhhHHHHHHHHHHHh-CCCccEEEEecCceeeeccCCC--CCCcCCCCCCchhhhh-----
Q 040253 83 HLATPMDFESKDPENEVIRPTINGMVSIMRACKN-AKTVRRLVFTSSAGTLDVEEHR--KPVYDETSWSDLDFVR----- 154 (338)
Q Consensus 83 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~~v~~Ss~~v~~~~~~~--~~~~~e~~~~~~~~~~----- 154 (338)
|+|+..... ......++.|+.++.++++++.. .+ +++|||+||.++|+..... ..+++|++|.......
T Consensus 89 h~A~~~~~~--~~~~~~~~~n~~g~~~ll~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~ 165 (342)
T 1y1p_A 89 HIASVVSFS--NKYDEVVTPAIGGTLNALRAAAATPS-VKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP 165 (342)
T ss_dssp ECCCCCSCC--SCHHHHHHHHHHHHHHHHHHHHTCTT-CCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSC
T ss_pred EeCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHhCCC-CcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhcccc
Confidence 999976532 23457899999999999999985 45 7899999999998632211 2578888765432110
Q ss_pred --hccCCCchHHHHHHHHHHHHHHHHHHc--CccEEEEcCCceeCCCCCCCCCh-hHHHhh-hhcccCCCC-CCCCCCCc
Q 040253 155 --SVKMTGWMYFVSKTLAEQAAWKFAEEN--NIDFISIIPSLVVGPFLTSSMPP-SLITAL-SPITRNEAH-YPIIKQGQ 227 (338)
Q Consensus 155 --~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~-~~~~~~~~~-~~~~~~~~ 227 (338)
.+..|.+.|+.+|.++|.+++.+++++ +++++++||+++|||........ .+...+ ....+.... ++.+..++
T Consensus 166 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (342)
T 1y1p_A 166 ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQY 245 (342)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEE
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccCCcCC
Confidence 012356799999999999999998876 78999999999999986543211 221111 222233322 22223468
Q ss_pred cccHHHHHHHHHHhhcCCCCCC-ceEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCccccccccccchhhhhh-cCC---
Q 040253 228 FVHLDDLCSAHIFLFEHPNAKG-RYICSSHPATILELAKFLREKYPEFNVPTEFEDVDENMKNMLFSSKKLTD-LGF--- 302 (338)
Q Consensus 228 ~i~v~D~a~~~~~~l~~~~~~~-~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-lg~--- 302 (338)
|+|++|+|++++.+++++...| .++++++++|+.|+++.+.+.+|...++..... .......+|++++++ |||
T Consensus 246 ~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~~~~~~~~~--~~~~~~~~d~~k~~~~lg~~~~ 323 (342)
T 1y1p_A 246 YVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPD--QGQDLSKFDTAPSLEILKSLGR 323 (342)
T ss_dssp EEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCC--CCCCCCEECCHHHHHHHHHTTC
T ss_pred EeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCccCCCCCCc--cccccccCChHHHHHHHhhccc
Confidence 9999999999999998765444 455667789999999999999986433332221 112235678899887 777
Q ss_pred cccccHHHHHHHHHHHHH
Q 040253 303 KFKYSLDDMFTGAVDTCR 320 (338)
Q Consensus 303 ~~~~~~~~~i~~~~~~~~ 320 (338)
.+..+++++|+++++|++
T Consensus 324 ~~~~~l~~~l~~~~~~~~ 341 (342)
T 1y1p_A 324 PGWRSIEESIKDLVGSET 341 (342)
T ss_dssp CSCCCHHHHHHHHHCCSC
T ss_pred CCcCCHHHHHHHHHHHhh
Confidence 566689999999998864
No 49
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=100.00 E-value=7.6e-41 Score=295.52 Aligned_cols=284 Identities=15% Similarity=0.153 Sum_probs=192.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC--ccEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG--CTGVF 82 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~vi 82 (338)
+|+||||||+||||++++++|+++|++|++++|+... ++ ++.+|++|++++.+++++ +|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--------------~~--~~~~Dl~d~~~~~~~~~~~~~d~vi 65 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR--------------PK--FEQVNLLDSNAVHHIIHDFQPHVIV 65 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------------CHHHHHHHCCSEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC--------------CC--eEEecCCCHHHHHHHHHhhCCCEEE
Confidence 5799999999999999999999999999999986542 12 678999999999999874 99999
Q ss_pred EecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCc
Q 040253 83 HLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGW 161 (338)
Q Consensus 83 ~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~ 161 (338)
|+|+..... ........+++|+.++.++++++.+.+ + +|||+||.++|+. ...+++|++ +..|.+
T Consensus 66 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~v~~~---~~~~~~E~~---------~~~~~~ 131 (315)
T 2ydy_A 66 HCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVG-A-FLIYISSDYVFDG---TNPPYREED---------IPAPLN 131 (315)
T ss_dssp ECC-------------------CHHHHHHHHHHHHHT-C-EEEEEEEGGGSCS---SSCSBCTTS---------CCCCCS
T ss_pred ECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEEchHHHcCC---CCCCCCCCC---------CCCCcC
Confidence 999965422 233455789999999999999999888 5 9999999999973 456678876 445778
Q ss_pred hHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCC--CCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHH
Q 040253 162 MYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTS--SMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHI 239 (338)
Q Consensus 162 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~ 239 (338)
.|+.+|..+|.+++.+ +++++++||+.+||+.... .+...+..... ..+..........++++|++|+|++++
T Consensus 132 ~Y~~sK~~~e~~~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~Dva~a~~ 206 (315)
T 2ydy_A 132 LYGKTKLDGEKAVLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQ-FSNKSANMDHWQQRFPTHVKDVATVCR 206 (315)
T ss_dssp HHHHHHHHHHHHHHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHH-CCSSCEEEECSSBBCCEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHH-hcCCCeeeccCceECcEEHHHHHHHHH
Confidence 9999999999999764 5788999999999998652 12221211111 023322222223378999999999999
Q ss_pred HhhcCC----CCCCceEE-ecCCCCHHHHHHHHHHhCCCCCC---CCCC-CC-ccccccccccchhhhhhcCCcccccHH
Q 040253 240 FLFEHP----NAKGRYIC-SSHPATILELAKFLREKYPEFNV---PTEF-ED-VDENMKNMLFSSKKLTDLGFKFKYSLD 309 (338)
Q Consensus 240 ~~l~~~----~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~---~~~~-~~-~~~~~~~~~~~~~~~~~lg~~~~~~~~ 309 (338)
.+++++ ..+++||+ +++++|+.|+++.+.+.+|.... +... .. .........+|+++++++||+|.++++
T Consensus 207 ~~~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~G~~p~~~~~ 286 (315)
T 2ydy_A 207 QLAEKRMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDSPVLGAQRPRNAQLDCSKLETLGIGQRTPFR 286 (315)
T ss_dssp HHHHHHHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSCCCSSSCCCSBCCBCCHHHHHTTCCCCCCHH
T ss_pred HHHHhhccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccccccccCCCcccccchHHHHhcCCCCCCCHH
Confidence 998753 45678988 55889999999999999875321 1110 11 112234567899999888999999999
Q ss_pred HHHHHHHHHHHHcC
Q 040253 310 DMFTGAVDTCRAKG 323 (338)
Q Consensus 310 ~~i~~~~~~~~~~~ 323 (338)
++|+++++|++++.
T Consensus 287 ~~l~~~~~~~~~~~ 300 (315)
T 2ydy_A 287 IGIKESLWPFLIDK 300 (315)
T ss_dssp HHHHHHHGGGCC--
T ss_pred HHHHHHHHHHccch
Confidence 99999999998763
No 50
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=100.00 E-value=1.1e-40 Score=302.27 Aligned_cols=303 Identities=17% Similarity=0.174 Sum_probs=224.6
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcH--HHHHHHhcCC-CCCC-cEEEEecccCCCCCchhhhCC--cc
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNK--KKVKHLLELP-KAST-HLTLWKADLAEEGNFDEPIRG--CT 79 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~-~~~~-~~~~~~~Dl~d~~~~~~~~~~--~d 79 (338)
|+||||||+||||++++++|+++|++|++++|+.... ..++.+.... ...+ +++++.+|++|.+++.+++++ +|
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 108 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD 108 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcCCC
Confidence 7999999999999999999999999999999976531 0111110000 0012 789999999999999888874 79
Q ss_pred EEEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCcc-----EEEEecCceeeeccCCCCCCcCCCCCCchhhh
Q 040253 80 GVFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVR-----RLVFTSSAGTLDVEEHRKPVYDETSWSDLDFV 153 (338)
Q Consensus 80 ~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-----~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~ 153 (338)
+|||+|+..... ........+++|+.++.++++++...+ ++ +|||+||.++|+. ... +++|++
T Consensus 109 ~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~~~~~~~~~v~~SS~~vyg~--~~~-~~~E~~------- 177 (381)
T 1n7h_A 109 EVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHT-IDSGRTVKYYQAGSSEMFGS--TPP-PQSETT------- 177 (381)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHH-HHHCCCCEEEEEEEGGGGTT--SCS-SBCTTS-------
T ss_pred EEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhC-CccCCccEEEEeCcHHHhCC--CCC-CCCCCC-------
Confidence 999999965421 112345778999999999999998876 55 9999999999973 223 778876
Q ss_pred hhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCCh-hHHHhh-hhcccCCC--CCCCCCC-Ccc
Q 040253 154 RSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPP-SLITAL-SPITRNEA--HYPIIKQ-GQF 228 (338)
Q Consensus 154 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~-~~~~~~~~--~~~~~~~-~~~ 228 (338)
+..|.+.|+.+|.++|.+++.++.+++++++++|++++|||+....... .+...+ ....+... .++.+.. ++|
T Consensus 178 --~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~ 255 (381)
T 1n7h_A 178 --PFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW 255 (381)
T ss_dssp --CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred --CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee
Confidence 4457889999999999999999988899999999999999986543221 111111 11223322 2233333 679
Q ss_pred ccHHHHHHHHHHhhcCCCCCCceEEe-cCCCCHHHHHHHHHHhCCCCCC-CCCCCC---ccccccccccchhhhhh-cCC
Q 040253 229 VHLDDLCSAHIFLFEHPNAKGRYICS-SHPATILELAKFLREKYPEFNV-PTEFED---VDENMKNMLFSSKKLTD-LGF 302 (338)
Q Consensus 229 i~v~D~a~~~~~~l~~~~~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~-lg~ 302 (338)
+|++|+|++++.+++++. +++||++ ++++|+.|+++.+.+.+|.... ...+.. .+.......+|++++++ |||
T Consensus 256 v~v~Dva~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~ 334 (381)
T 1n7h_A 256 GFAGDYVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRYFRPAEVDNLQGDASKAKEVLGW 334 (381)
T ss_dssp EEHHHHHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGGSCSSCCCBCCBCCHHHHHHHCC
T ss_pred EEHHHHHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcccCCccccccccCCHHHHHHhcCC
Confidence 999999999999998765 5789884 5789999999999999985210 011111 12233455679999987 999
Q ss_pred cccccHHHHHHHHHHHHHHc
Q 040253 303 KFKYSLDDMFTGAVDTCRAK 322 (338)
Q Consensus 303 ~~~~~~~~~i~~~~~~~~~~ 322 (338)
+|+++++++|+++++|++++
T Consensus 335 ~p~~~l~e~l~~~~~~~~~~ 354 (381)
T 1n7h_A 335 KPQVGFEKLVKMMVDEDLEL 354 (381)
T ss_dssp CCCSCHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHhh
Confidence 99989999999999999764
No 51
>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*
Probab=100.00 E-value=2.4e-41 Score=296.53 Aligned_cols=277 Identities=12% Similarity=0.039 Sum_probs=212.0
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC--ccEEEE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG--CTGVFH 83 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~vi~ 83 (338)
|+||||||+||||++++++|+ +|++|++++|++. .+.+|++|.+++.+++++ +|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------------~~~~D~~d~~~~~~~~~~~~~d~vih 60 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------------EFCGDFSNPKGVAETVRKLRPDVIVN 60 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------------SSCCCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------------cccccCCCHHHHHHHHHhcCCCEEEE
Confidence 489999999999999999999 8999999998752 246899999999998875 999999
Q ss_pred ecccCCC-CCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCch
Q 040253 84 LATPMDF-ESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWM 162 (338)
Q Consensus 84 ~a~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~ 162 (338)
+|+.... .........++.|+.++.++++++++.+ + +|||+||.++|+ .....+++|++ +..|.+.
T Consensus 61 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~-~-~~v~~SS~~vy~--~~~~~~~~E~~---------~~~p~~~ 127 (299)
T 1n2s_A 61 AAAHTAVDKAESEPELAQLLNATSVEAIAKAANETG-A-WVVHYSTDYVFP--GTGDIPWQETD---------ATSPLNV 127 (299)
T ss_dssp CCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTT-C-EEEEEEEGGGSC--CCTTCCBCTTS---------CCCCSSH
T ss_pred CcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcC-C-cEEEEecccEEe--CCCCCCCCCCC---------CCCCccH
Confidence 9996542 1123445789999999999999999988 5 899999999998 44445778887 4457889
Q ss_pred HHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhh-cccCCCCCCCCCCCccccHHHHHHHHHHh
Q 040253 163 YFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSP-ITRNEAHYPIIKQGQFVHLDDLCSAHIFL 241 (338)
Q Consensus 163 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 241 (338)
|+.+|.++|.+++.++ .+++++||+++|||+... .+...... ..+..........++++|++|+|++++.+
T Consensus 128 Y~~sK~~~E~~~~~~~----~~~~ilRp~~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 199 (299)
T 1n2s_A 128 YGKTKLAGEKALQDNC----PKHLIFRTSWVYAGKGNN----FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHA 199 (299)
T ss_dssp HHHHHHHHHHHHHHHC----SSEEEEEECSEECSSSCC----HHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC----CCeEEEeeeeecCCCcCc----HHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHH
Confidence 9999999999997653 489999999999998542 11111111 12322222222337899999999999999
Q ss_pred hcCC--C--CCCceEEe-cCCCCHHHHHHHHHHhCCCCCC----C-C---C---CCCccccccccccchhhhhh-cCCcc
Q 040253 242 FEHP--N--AKGRYICS-SHPATILELAKFLREKYPEFNV----P-T---E---FEDVDENMKNMLFSSKKLTD-LGFKF 304 (338)
Q Consensus 242 l~~~--~--~~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~----~-~---~---~~~~~~~~~~~~~~~~~~~~-lg~~~ 304 (338)
++++ . .+++||++ ++++|++|+++.+.+.+|.... + . . +...........+|++++++ |||+|
T Consensus 200 ~~~~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p 279 (299)
T 1n2s_A 200 IRVALNKPEVAGLYHLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPASRPGNSRLNTEKFQRNFDLIL 279 (299)
T ss_dssp HHHHHHCGGGCEEEECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHHHTCCC
T ss_pred HHHhccccccCceEEEeCCCCCCHHHHHHHHHHHhCCCccccccccccccccccccCcCCCCCceeeeHHHHHHhcCCCC
Confidence 9875 2 36789985 5789999999999988763210 1 0 0 00111223456789999987 99999
Q ss_pred cccHHHHHHHHHHHHHHcCC
Q 040253 305 KYSLDDMFTGAVDTCRAKGL 324 (338)
Q Consensus 305 ~~~~~~~i~~~~~~~~~~~~ 324 (338)
+ +++++|+++++|++++..
T Consensus 280 ~-~~~~~l~~~~~~~~~~~~ 298 (299)
T 1n2s_A 280 P-QWELGVKRMLTEMFTTTT 298 (299)
T ss_dssp C-BHHHHHHHHHHHHHSCCC
T ss_pred C-CHHHHHHHHHHHHHhcCC
Confidence 8 899999999999987654
No 52
>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}
Probab=100.00 E-value=9.6e-41 Score=298.23 Aligned_cols=298 Identities=18% Similarity=0.130 Sum_probs=222.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCC-------CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERG-------YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 76 (338)
++|+||||||+||||++++++|+++| ++|++++|+...... ....+++++.+|++|++++.++++
T Consensus 13 ~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~~ 84 (342)
T 2hrz_A 13 QGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA--------GFSGAVDARAADLSAPGEAEKLVE 84 (342)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT--------TCCSEEEEEECCTTSTTHHHHHHH
T ss_pred cCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc--------ccCCceeEEEcCCCCHHHHHHHHh
Confidence 46899999999999999999999999 899999997643211 012578999999999999999884
Q ss_pred -CccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCC----CccEEEEecCceeeeccCCCCCCcCCCCCCchh
Q 040253 77 -GCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAK----TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLD 151 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~ 151 (338)
++|+|||+|+.............++.|+.++.++++++.+.+ .+++|||+||.++|+ .....+++|++
T Consensus 85 ~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~--~~~~~~~~E~~----- 157 (342)
T 2hrz_A 85 ARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFG--APLPYPIPDEF----- 157 (342)
T ss_dssp TCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCC--SSCCSSBCTTC-----
T ss_pred cCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhC--CCCCCCcCCCC-----
Confidence 899999999965421122345778999999999999998754 268999999999997 33345788887
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeC-CCCCCCCCh-hHHHhhh-hcccCCCCCC-CCCC-C
Q 040253 152 FVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVG-PFLTSSMPP-SLITALS-PITRNEAHYP-IIKQ-G 226 (338)
Q Consensus 152 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G-~~~~~~~~~-~~~~~~~-~~~~~~~~~~-~~~~-~ 226 (338)
+..|.+.|+.+|.++|.+++.++++++++++++|++.+|| |+....... .+...+. ...+....++ .+.. .
T Consensus 158 ----~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (342)
T 2hrz_A 158 ----HTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRH 233 (342)
T ss_dssp ----CCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEE
T ss_pred ----CCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccce
Confidence 4457789999999999999999988889999999999998 764322111 1222221 2223332222 2222 4
Q ss_pred ccccHHHHHHHHHHhhcCCC----CCCceEEecCCCCHHHHHHHHHHhCCCCCC-CCCCCCcc--cc---ccccccchhh
Q 040253 227 QFVHLDDLCSAHIFLFEHPN----AKGRYICSSHPATILELAKFLREKYPEFNV-PTEFEDVD--EN---MKNMLFSSKK 296 (338)
Q Consensus 227 ~~i~v~D~a~~~~~~l~~~~----~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~-~~~~~~~~--~~---~~~~~~~~~~ 296 (338)
+++|++|+|++++.+++.+. .+++||+++.++|+.|+++.+.+.+|.... .......+ .. .....+|+++
T Consensus 234 ~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k 313 (342)
T 2hrz_A 234 WHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPGLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCEGWAPGFEAKR 313 (342)
T ss_dssp EEECHHHHHHHHHHHHHSCHHHHCSCCEEECCCEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHTTSCCCBCCHH
T ss_pred eeEehHHHHHHHHHHHhccccccCCccEEEcCCCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhcccccccChHH
Confidence 58999999999999998754 356899977789999999999998874210 01111111 01 1112478899
Q ss_pred hhhcCCcccccHHHHHHHHHHHHH
Q 040253 297 LTDLGFKFKYSLDDMFTGAVDTCR 320 (338)
Q Consensus 297 ~~~lg~~~~~~~~~~i~~~~~~~~ 320 (338)
+++|||+|+++++++|+++++|++
T Consensus 314 ~~~lG~~p~~~l~e~l~~~~~~~~ 337 (342)
T 2hrz_A 314 ARELGFTAESSFEEIIQVHIEDEL 337 (342)
T ss_dssp HHHTTCCCCSSHHHHHHHHHHHHS
T ss_pred HHHcCCCCCCCHHHHHHHHHHHhc
Confidence 888999999999999999999997
No 53
>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2
Probab=100.00 E-value=1e-39 Score=317.40 Aligned_cols=308 Identities=17% Similarity=0.201 Sum_probs=224.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcH-HHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC--CccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNK-KKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--GCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~ 80 (338)
++|+||||||+||||++++++|+++|++|++++|+.... .....+.... ..+++++.+|++|++++.++++ ++|+
T Consensus 10 ~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~v~~v~~Dl~d~~~l~~~~~~~~~D~ 87 (699)
T 1z45_A 10 TSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLT--KHHIPFYEVDLCDRKGLEKVFKEYKIDS 87 (699)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHH--TSCCCEEECCTTCHHHHHHHHHHSCCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhcc--CCceEEEEcCCCCHHHHHHHHHhCCCCE
Confidence 458999999999999999999999999999999975432 1111111100 1468899999999999999888 8999
Q ss_pred EEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccC--CCCCCcCCCCCCchhhhhhcc
Q 040253 81 VFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEE--HRKPVYDETSWSDLDFVRSVK 157 (338)
Q Consensus 81 vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~--~~~~~~~e~~~~~~~~~~~~~ 157 (338)
|||+|+..... ......+.+++|+.++.++++++++.+ +++|||+||.++|+... ....+++|++ +.
T Consensus 88 Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~-~~~iV~~SS~~vyg~~~~~~~~~~~~E~~---------~~ 157 (699)
T 1z45_A 88 VIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYN-VSKFVFSSSATVYGDATRFPNMIPIPEEC---------PL 157 (699)
T ss_dssp EEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHT-CCEEEEEEEGGGGCCGGGSTTCCSBCTTS---------CC
T ss_pred EEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECcHHHhCCCccccccCCccccC---------CC
Confidence 99999965421 111234678999999999999999888 88999999999997322 1124566665 34
Q ss_pred CCCchHHHHHHHHHHHHHHHHHH--cCccEEEEcCCceeCCCCCCC-------CChhH-HHhhhhccc--CCC-CCC---
Q 040253 158 MTGWMYFVSKTLAEQAAWKFAEE--NNIDFISIIPSLVVGPFLTSS-------MPPSL-ITALSPITR--NEA-HYP--- 221 (338)
Q Consensus 158 ~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~~ilRp~~v~G~~~~~~-------~~~~~-~~~~~~~~~--~~~-~~~--- 221 (338)
.|.+.|+.+|.++|.+++.++++ .+++++++||+++||++.... ....+ ..+.....+ ... .++
T Consensus 158 ~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 237 (699)
T 1z45_A 158 GPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDY 237 (699)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC----
T ss_pred CCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcc
Confidence 57789999999999999998877 699999999999999864321 01112 112222222 222 222
Q ss_pred ---CCCC-CccccHHHHHHHHHHhhcCC-------CCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCCCC-Ccccccc
Q 040253 222 ---IIKQ-GQFVHLDDLCSAHIFLFEHP-------NAKGRYIC-SSHPATILELAKFLREKYPEFNVPTEFE-DVDENMK 288 (338)
Q Consensus 222 ---~~~~-~~~i~v~D~a~~~~~~l~~~-------~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~-~~~~~~~ 288 (338)
.+.. ++|||++|+|++++.+++.. ..+++||+ +++++|+.|+++.+++.+|. +.+.... .......
T Consensus 238 ~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~-~~~~~~~~~~~~~~~ 316 (699)
T 1z45_A 238 DSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGI-DLPYKVTGRRAGDVL 316 (699)
T ss_dssp --CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTC-CCCC---------CC
T ss_pred cCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCC-CCCceecCCCCCccc
Confidence 2333 78999999999999998642 12458988 56789999999999998874 3333322 1223345
Q ss_pred ccccchhhhhh-cCCcccccHHHHHHHHHHHHHHcCC
Q 040253 289 NMLFSSKKLTD-LGFKFKYSLDDMFTGAVDTCRAKGL 324 (338)
Q Consensus 289 ~~~~~~~~~~~-lg~~~~~~~~~~i~~~~~~~~~~~~ 324 (338)
...+|++++++ |||+|+++++++|+++++|+++++.
T Consensus 317 ~~~~d~~ka~~~LG~~p~~~l~egl~~~~~w~~~~~~ 353 (699)
T 1z45_A 317 NLTAKPDRAKRELKWQTELQVEDSCKDLWKWTTENPF 353 (699)
T ss_dssp CCCBCCHHHHHHTCCCCCCCHHHHHHHHHHHHHHCTT
T ss_pred cccCCHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCc
Confidence 66788999986 9999999999999999999988654
No 54
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=100.00 E-value=4.2e-39 Score=289.96 Aligned_cols=296 Identities=15% Similarity=0.140 Sum_probs=222.6
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC-----CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC--
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG-----YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG-- 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-- 77 (338)
+|+|||||||||||++++++|+++| ++|++++|++.... . ...+++++.+|++|.+++.+++++
T Consensus 1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~-------~--~~~~~~~~~~Dl~d~~~~~~~~~~~~ 71 (364)
T 2v6g_A 1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW-------H--EDNPINYVQCDISDPDDSQAKLSPLT 71 (364)
T ss_dssp CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC-------C--CSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc-------c--ccCceEEEEeecCCHHHHHHHHhcCC
Confidence 3799999999999999999999999 99999999765432 0 115789999999999999999987
Q ss_pred -ccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhC--CCccEEE-------EecCceeeeccCCCCCCcCCCCC
Q 040253 78 -CTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNA--KTVRRLV-------FTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 78 -~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v-------~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
+|+|||+|+... .+....++.|+.++.+++++|++. + +++|| |+||.++||.......+++|+++
T Consensus 72 ~~d~vih~a~~~~----~~~~~~~~~n~~~~~~l~~a~~~~~~~-~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~ 146 (364)
T 2v6g_A 72 DVTHVFYVTWANR----STEQENCEANSKMFRNVLDAVIPNCPN-LKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLP 146 (364)
T ss_dssp TCCEEEECCCCCC----SSHHHHHHHHHHHHHHHHHHHTTTCTT-CCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSC
T ss_pred CCCEEEECCCCCc----chHHHHHHHhHHHHHHHHHHHHHhccc-cceEEeccCceEEEechhhccccccCCCCCCcccc
Confidence 999999999653 234578999999999999999987 5 88998 89999999843333457788863
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHcC-ccEEEEcCCceeCCCCCCCCChhHHH-hhhh---cccCCCC-CC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENN-IDFISIIPSLVVGPFLTSSMPPSLIT-ALSP---ITRNEAH-YP 221 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~-~~~~---~~~~~~~-~~ 221 (338)
. .++.+.| +.+|+.+++++++++ ++++++||+++|||+........... .... ..+.+.. ++
T Consensus 147 ~--------~~~~~~y----~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 214 (364)
T 2v6g_A 147 R--------LKYMNFY----YDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTG 214 (364)
T ss_dssp C--------CSSCCHH----HHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCS
T ss_pred C--------Cccchhh----HHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCC
Confidence 2 1235567 458999998887777 99999999999999875322211111 1111 1344433 33
Q ss_pred CC----CCCccccHHHHHHHHHHhhcCCCC-CCceEEe-cCCCCHHHHHHHHHHhCCCCC------CCCCC---------
Q 040253 222 II----KQGQFVHLDDLCSAHIFLFEHPNA-KGRYICS-SHPATILELAKFLREKYPEFN------VPTEF--------- 280 (338)
Q Consensus 222 ~~----~~~~~i~v~D~a~~~~~~l~~~~~-~~~~~~~-~~~~t~~e~~~~i~~~~~~~~------~~~~~--------- 280 (338)
.+ ...++++++|+|++++.+++++.. +++||++ ++++|+.|+++.+.+.+|... +|...
T Consensus 215 ~~~~~~~~~~~~~v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~ 294 (364)
T 2v6g_A 215 CKAAWDGYSDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEP 294 (364)
T ss_dssp CHHHHHSCBCCEEHHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHH
T ss_pred CcccccccCCCCcHHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHH
Confidence 32 125688899999999999988753 4589985 567999999999999887432 22110
Q ss_pred --------CC-ccc---cc-----------cc-cccchhhhhhcCCcccccHHHHHHHHHHHHHHcCCCC
Q 040253 281 --------ED-VDE---NM-----------KN-MLFSSKKLTDLGFKFKYSLDDMFTGAVDTCRAKGLLP 326 (338)
Q Consensus 281 --------~~-~~~---~~-----------~~-~~~~~~~~~~lg~~~~~~~~~~i~~~~~~~~~~~~~~ 326 (338)
.+ .+. .. .. ..+|++++++|||+|.++++++|+++++|++++|.+|
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~~~~e~l~~~~~~~~~~g~lp 364 (364)
T 2v6g_A 295 VWEEIVRENGLTPTKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFRNSKNAFISWIDKAKAYKIVP 364 (364)
T ss_dssp HHHHHHHHTTCCCCCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCCCHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHhCCCccccccccccchhhhccccchhhcchHHHHhcCCCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 00 011 11 23 4788899988999999899999999999999999875
No 55
>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1
Probab=100.00 E-value=1.1e-39 Score=314.88 Aligned_cols=309 Identities=19% Similarity=0.286 Sum_probs=227.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHC-CCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCC-chhhhCCccEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLER-GYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGN-FDEPIRGCTGV 81 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~-~~~~~~~~d~v 81 (338)
++|+||||||+||||++++++|+++ |++|++++|+......+ . ...+++++.+|++|.++ +.++++++|+|
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~---~----~~~~v~~v~~Dl~d~~~~~~~~~~~~D~V 386 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF---L----NHPHFHFVEGDISIHSEWIEYHVKKCDVV 386 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG---T----TCTTEEEEECCTTTCHHHHHHHHHHCSEE
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh---c----cCCceEEEECCCCCcHHHHHHhhcCCCEE
Confidence 4689999999999999999999998 89999999987543221 1 12578999999999765 67788899999
Q ss_pred EEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCC
Q 040253 82 FHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTG 160 (338)
Q Consensus 82 i~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~ 160 (338)
||+|+..... ...+....++.|+.++.++++++.+.+ ++|||+||.++|+ .....+++|+++... ..+...|.
T Consensus 387 ih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~--~r~V~~SS~~vyg--~~~~~~~~E~~~~~~--~~p~~~p~ 460 (660)
T 1z7e_A 387 LPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR--KRIIFPSTSEVYG--MCSDKYFDEDHSNLI--VGPVNKPR 460 (660)
T ss_dssp EECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT--CEEEEECCGGGGB--TCCSSSBCTTTCCEE--ECCTTCTT
T ss_pred EECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC--CEEEEEecHHHcC--CCCCcccCCCccccc--cCcccCCC
Confidence 9999865421 112345788999999999999999887 7999999999998 334456778764321 01122467
Q ss_pred chHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCC------CChhHHHhh-hhcccCCC-CCCCCCC-CccccH
Q 040253 161 WMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSS------MPPSLITAL-SPITRNEA-HYPIIKQ-GQFVHL 231 (338)
Q Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~------~~~~~~~~~-~~~~~~~~-~~~~~~~-~~~i~v 231 (338)
+.|+.+|.++|.+++.+++++|++++++||+++|||+.... ....+...+ ....+.+. .++.+.. ++|+|+
T Consensus 461 ~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v 540 (660)
T 1z7e_A 461 WIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDI 540 (660)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEH
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEH
Confidence 79999999999999999888899999999999999986420 011111111 12223332 2223322 689999
Q ss_pred HHHHHHHHHhhcCCC---CCCceEEec-C-CCCHHHHHHHHHHhCCCCCCCCCCCCc---------------cccccccc
Q 040253 232 DDLCSAHIFLFEHPN---AKGRYICSS-H-PATILELAKFLREKYPEFNVPTEFEDV---------------DENMKNML 291 (338)
Q Consensus 232 ~D~a~~~~~~l~~~~---~~~~~~~~~-~-~~t~~e~~~~i~~~~~~~~~~~~~~~~---------------~~~~~~~~ 291 (338)
+|+|++++.+++.+. .+++||+++ + ++|+.|+++.+.+.+|.......++.. ........
T Consensus 541 ~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (660)
T 1z7e_A 541 RDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRK 620 (660)
T ss_dssp HHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTTCCCCSCCC
T ss_pred HHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhccccccccccchhhcc
Confidence 999999999998764 355899865 4 799999999999887642211111110 01223456
Q ss_pred cchhhhhh-cCCcccccHHHHHHHHHHHHHHcCCC
Q 040253 292 FSSKKLTD-LGFKFKYSLDDMFTGAVDTCRAKGLL 325 (338)
Q Consensus 292 ~~~~~~~~-lg~~~~~~~~~~i~~~~~~~~~~~~~ 325 (338)
.|++++++ |||+|+++++++|+++++|++++..+
T Consensus 621 ~d~~ka~~~LG~~p~~~l~egl~~~i~~~~~~~~~ 655 (660)
T 1z7e_A 621 PSIRNAHRCLDWEPKIDMQETIDETLDFFLRTVDL 655 (660)
T ss_dssp BCCHHHHHHHCCCCCCCHHHHHHHHHHHHHTTSCC
T ss_pred cCHHHHHHhcCCCccCcHHHHHHHHHHHHHhhccc
Confidence 78999987 99999999999999999999987643
No 56
>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2
Probab=100.00 E-value=4.1e-40 Score=287.73 Aligned_cols=271 Identities=14% Similarity=0.074 Sum_probs=208.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC--CccEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--GCTGV 81 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~v 81 (338)
..|+|||||||||||++++++|+++|++|++++|+ .+|++|.+++.++++ ++|+|
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-----------------------~~Dl~d~~~~~~~~~~~~~d~v 67 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ-----------------------DLDITNVLAVNKFFNEKKPNVV 67 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT-----------------------TCCTTCHHHHHHHHHHHCCSEE
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc-----------------------cCCCCCHHHHHHHHHhcCCCEE
Confidence 46899999999999999999999999999999885 269999999999888 89999
Q ss_pred EEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCC
Q 040253 82 FHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTG 160 (338)
Q Consensus 82 i~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~ 160 (338)
||+|+..... ........++.|+.++.++++++++.+ + +|||+||.++|+ .....+++|++ +..|.
T Consensus 68 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~-~-~iv~~SS~~v~~--~~~~~~~~E~~---------~~~~~ 134 (292)
T 1vl0_A 68 INCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVG-A-EIVQISTDYVFD--GEAKEPITEFD---------EVNPQ 134 (292)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHT-C-EEEEEEEGGGSC--SCCSSCBCTTS---------CCCCC
T ss_pred EECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcC-C-eEEEechHHeEC--CCCCCCCCCCC---------CCCCc
Confidence 9999965421 112345789999999999999999988 6 999999999997 33445778887 44577
Q ss_pred chHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHH
Q 040253 161 WMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIF 240 (338)
Q Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 240 (338)
+.|+.+|..+|.+++.+ +.+++++||+.+||| .. .+...+.. ....+..........++++|++|+|++++.
T Consensus 135 ~~Y~~sK~~~E~~~~~~----~~~~~~lR~~~v~G~-~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~ 206 (292)
T 1vl0_A 135 SAYGKTKLEGENFVKAL----NPKYYIVRTAWLYGD-GN-NFVKTMIN--LGKTHDELKVVHDQVGTPTSTVDLARVVLK 206 (292)
T ss_dssp SHHHHHHHHHHHHHHHH----CSSEEEEEECSEESS-SS-CHHHHHHH--HHHHCSEEEEESSCEECCEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHhh----CCCeEEEeeeeeeCC-Cc-ChHHHHHH--HHhcCCcEEeecCeeeCCccHHHHHHHHHH
Confidence 89999999999999765 457999999999999 22 21111111 111122221222233789999999999999
Q ss_pred hhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCC----CCCCCC-Cccccccccccchhhhhh-cCCcccccHHHHHH
Q 040253 241 LFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFN----VPTEFE-DVDENMKNMLFSSKKLTD-LGFKFKYSLDDMFT 313 (338)
Q Consensus 241 ~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~-lg~~~~~~~~~~i~ 313 (338)
+++++ .+++||+ +++++|+.|+++.+.+.+|... +|.... ..........+|++++++ |||+|+ +++++|+
T Consensus 207 ~~~~~-~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~-~~~~~l~ 284 (292)
T 1vl0_A 207 VIDEK-NYGTFHCTCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFPRPAKRPKYSVLRNYMLELTTGDITR-EWKESLK 284 (292)
T ss_dssp HHHHT-CCEEEECCCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSCCSSCCCSBCCBCCHHHHHTTCCCCC-BHHHHHH
T ss_pred HHhcC-CCcEEEecCCCCccHHHHHHHHHHHhCCCCceeeccccccCcccCCCccccccHHHHHHHcCCCCC-CHHHHHH
Confidence 99876 6778988 4578999999999999987421 111111 111233456789999988 999999 9999999
Q ss_pred HHHHHHH
Q 040253 314 GAVDTCR 320 (338)
Q Consensus 314 ~~~~~~~ 320 (338)
++++||+
T Consensus 285 ~~~~~~~ 291 (292)
T 1vl0_A 285 EYIDLLQ 291 (292)
T ss_dssp HHHHHHT
T ss_pred HHHHHhc
Confidence 9999985
No 57
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=278.04 Aligned_cols=273 Identities=17% Similarity=0.156 Sum_probs=201.4
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEec
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHLA 85 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 85 (338)
|||||||||||||++|+++|+++||+|++++|++... .+ ..|. ...+.++++|+|||+|
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~--------------~~---~~~~----~~~~~l~~~d~vihla 59 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG--------------RI---TWDE----LAASGLPSCDAAVNLA 59 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT--------------EE---EHHH----HHHHCCCSCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC--------------ee---ecch----hhHhhccCCCEEEEec
Confidence 6899999999999999999999999999999976431 12 1221 1234567899999999
Q ss_pred ccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCC
Q 040253 86 TPMDFE-----SKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMT 159 (338)
Q Consensus 86 ~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p 159 (338)
+..... .......+++.|+.++.+|+++++..+ +..+||+.||.++|+ .....+.+|++ +..|
T Consensus 60 ~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg--~~~~~~~~E~~---------p~~~ 128 (298)
T 4b4o_A 60 GENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQ--PSLTAEYDEDS---------PGGD 128 (298)
T ss_dssp CCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSC--CCSSCCBCTTC---------CCSC
T ss_pred cCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeec--CCCCCcccccC---------Cccc
Confidence 743211 112234678899999999999998876 355799999999998 55567788887 4456
Q ss_pred CchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhh-hhcccCCCCCCCCCC-CccccHHHHHHH
Q 040253 160 GWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITAL-SPITRNEAHYPIIKQ-GQFVHLDDLCSA 237 (338)
Q Consensus 160 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~i~v~D~a~~ 237 (338)
.+.|+..|...|.... ....+++++++||+.+|||+.. .+.... ....+....++.+.+ ++|||++|++++
T Consensus 129 ~~~~~~~~~~~e~~~~--~~~~~~~~~~~r~~~v~g~~~~-----~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a 201 (298)
T 4b4o_A 129 FDFFSNLVTKWEAAAR--LPGDSTRQVVVRSGVVLGRGGG-----AMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGI 201 (298)
T ss_dssp SSHHHHHHHHHHHHHC--CSSSSSEEEEEEECEEECTTSH-----HHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHH
T ss_pred cchhHHHHHHHHHHHH--hhccCCceeeeeeeeEEcCCCC-----chhHHHHHHhcCCcceecccCceeecCcHHHHHHH
Confidence 7788888887776432 2445899999999999999742 121111 112344445555555 789999999999
Q ss_pred HHHhhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCCCCCcc-----c------cccccccchhhhhhcCCccc
Q 040253 238 HIFLFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFNVPTEFEDVD-----E------NMKNMLFSSKKLTDLGFKFK 305 (338)
Q Consensus 238 ~~~~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~-----~------~~~~~~~~~~~~~~lg~~~~ 305 (338)
+..+++++...|+||+ +++++|++|+++.+++.+|+. ....++.+. . ...+...++++++++||+|+
T Consensus 202 ~~~~~~~~~~~g~yn~~~~~~~t~~e~~~~ia~~lgrp-~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~ 280 (298)
T 4b4o_A 202 LTHALEANHVHGVLNGVAPSSATNAEFAQTFGAALGRR-AFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYS 280 (298)
T ss_dssp HHHHHHCTTCCEEEEESCSCCCBHHHHHHHHHHHHTCC-CCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCS
T ss_pred HHHHHhCCCCCCeEEEECCCccCHHHHHHHHHHHhCcC-CcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCC
Confidence 9999999888889998 568899999999999998752 222222210 0 01244677889999999999
Q ss_pred cc-HHHHHHHHHHH
Q 040253 306 YS-LDDMFTGAVDT 318 (338)
Q Consensus 306 ~~-~~~~i~~~~~~ 318 (338)
++ ++++|+++++.
T Consensus 281 yp~l~~al~~l~~~ 294 (298)
T 4b4o_A 281 FPELGAALKEIAEN 294 (298)
T ss_dssp CCSHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHh
Confidence 96 99999998873
No 58
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=100.00 E-value=1.8e-36 Score=284.32 Aligned_cols=279 Identities=14% Similarity=0.125 Sum_probs=202.1
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
+|+|||||||||||++|+++|+++|++|++++|+.... ..+.+|+.+ .+.+++.++|+|||+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~----------------~~v~~d~~~--~~~~~l~~~D~Vih~ 208 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP----------------GKRFWDPLN--PASDLLDGADVLVHL 208 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT----------------TCEECCTTS--CCTTTTTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc----------------cceeecccc--hhHHhcCCCCEEEEC
Confidence 68999999999999999999999999999999987642 225678764 356778899999999
Q ss_pred cccCCCC--CCCccchhhhhhhHHHHHHHHH-HHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCc
Q 040253 85 ATPMDFE--SKDPENEVIRPTINGMVSIMRA-CKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGW 161 (338)
Q Consensus 85 a~~~~~~--~~~~~~~~~~~n~~~~~~l~~~-~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~ 161 (338)
|+..... .......+++.|+.++.+|+++ ++..+ +++|||+||.++|+.. ....+++|+++ . |.+
T Consensus 209 A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~-~~r~V~~SS~~vyg~~-~~~~~~~E~~~---------~-~~~ 276 (516)
T 3oh8_A 209 AGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQ-CTTMISASAVGFYGHD-RGDEILTEESE---------S-GDD 276 (516)
T ss_dssp CCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSS-CCEEEEEEEGGGGCSE-EEEEEECTTSC---------C-CSS
T ss_pred CCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeCcceEecCC-CCCCccCCCCC---------C-CcC
Confidence 9975421 2234456889999999999999 55556 8899999999999721 12346777762 2 677
Q ss_pred hHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhh-cccCCCCCCCCCC-CccccHHHHHHHHH
Q 040253 162 MYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSP-ITRNEAHYPIIKQ-GQFVHLDDLCSAHI 239 (338)
Q Consensus 162 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~i~v~D~a~~~~ 239 (338)
.|+.+|...|..+.. +...|++++++||+++|||+.. .+..+... ..+....++.+.+ ++|||++|+|++++
T Consensus 277 ~y~~~~~~~E~~~~~-~~~~gi~~~ilRp~~v~Gp~~~-----~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~ 350 (516)
T 3oh8_A 277 FLAEVCRDWEHATAP-ASDAGKRVAFIRTGVALSGRGG-----MLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYY 350 (516)
T ss_dssp HHHHHHHHHHHTTHH-HHHTTCEEEEEEECEEEBTTBS-----HHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHH-HHhCCCCEEEEEeeEEECCCCC-----hHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHH
Confidence 899999999987654 4556999999999999999831 12221111 1233334444444 68999999999999
Q ss_pred HhhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCC---CCCCCCCc--------cccccccccchhhhhhcCCccccc
Q 040253 240 FLFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFN---VPTEFEDV--------DENMKNMLFSSKKLTDLGFKFKYS 307 (338)
Q Consensus 240 ~~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~---~~~~~~~~--------~~~~~~~~~~~~~~~~lg~~~~~~ 307 (338)
.+++++...++||+ +++++|+.|+++.+.+.+|... +|.+.... .........+++++++|||+|+++
T Consensus 351 ~~l~~~~~~g~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~ 430 (516)
T 3oh8_A 351 RAIVDAQISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYT 430 (516)
T ss_dssp HHHHCTTCCEEEEESCSCCEEHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTCCCSCS
T ss_pred HHHhCcccCCcEEEECCCCCCHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCC
Confidence 99998877889987 5688999999999999887421 22211110 011224457788888999999998
Q ss_pred -HHHHHHHHHHHH
Q 040253 308 -LDDMFTGAVDTC 319 (338)
Q Consensus 308 -~~~~i~~~~~~~ 319 (338)
++++|+++++..
T Consensus 431 ~l~e~l~~~l~~~ 443 (516)
T 3oh8_A 431 DIGAAIAHELGYE 443 (516)
T ss_dssp SHHHHHHHHHTCC
T ss_pred CHHHHHHHHhCcc
Confidence 999999998753
No 59
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=100.00 E-value=2.3e-36 Score=277.73 Aligned_cols=303 Identities=13% Similarity=0.140 Sum_probs=213.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcC----------CCCCCcEEEEecccCCCCCchh
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLEL----------PKASTHLTLWKADLAEEGNFDE 73 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~~~Dl~d~~~~~~ 73 (338)
.+|+||||||+||||++++++|++.|++|++++|+.........+... .....+++++.+|++|++.+.
T Consensus 68 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 146 (427)
T 4f6c_A 68 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 146 (427)
T ss_dssp CCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-
T ss_pred CCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-
Confidence 368999999999999999999999999999999998743322221110 000157999999999988888
Q ss_pred hhCCccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeec---cCCCCCCcCCCCCCch
Q 040253 74 PIRGCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDV---EEHRKPVYDETSWSDL 150 (338)
Q Consensus 74 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~---~~~~~~~~~e~~~~~~ 150 (338)
.+.++|+|||+|+..... .+....++.|+.++.++++++.. + .++|||+||.++ |. ......+++|+++..
T Consensus 147 ~~~~~d~Vih~A~~~~~~--~~~~~~~~~Nv~g~~~l~~aa~~-~-~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~~- 220 (427)
T 4f6c_A 147 LPENMDTIIHAGARTDHF--GDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISV-GTYFDIDTEDVTFSEADVYK- 220 (427)
T ss_dssp CSSCCSEEEECCCCC---------CHHHHHHHHHHHHHHHHHH-T-TCEEEEEEEGGG-GSEECSSCSCCEECTTCSCS-
T ss_pred CcCCCCEEEECCcccCCC--CCHHHHHHHHHHHHHHHHHHHHh-c-CCcEEEECchHh-CCCccCCCCCcccccccccc-
Confidence 778999999999976532 34457899999999999999998 5 789999999998 42 123456778887422
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChh-----HHHhhhhcccCC-CCCC-CC
Q 040253 151 DFVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPS-----LITALSPITRNE-AHYP-II 223 (338)
Q Consensus 151 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~-----~~~~~~~~~~~~-~~~~-~~ 223 (338)
+..|.+.|+.+|+++|.+++.+++ .|++++++||++|||+.....+... +...+....... .... ..
T Consensus 221 -----~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (427)
T 4f6c_A 221 -----GQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAE 294 (427)
T ss_dssp -----SCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHT
T ss_pred -----CCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCcccc
Confidence 234788999999999999999765 6999999999999999876542211 222222211111 1111 12
Q ss_pred CCCccccHHHHHHHHHHhhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCCCCCccc-----------------
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFNVPTEFEDVDE----------------- 285 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~----------------- 285 (338)
..+++++++|+|++++.++..+..+++||+ +++++|+.|+++.+.+ ++...+ ....+..
T Consensus 295 ~~~~~v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g~~~~--~~~~~~~~l~~~~~~~~~~~~~~~ 371 (427)
T 4f6c_A 295 MPVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KEIELV--SDESFNEILQKQDMYETIGLTSVD 371 (427)
T ss_dssp CEECCEEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SCCEEE--CHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred ceEEEeeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cCCccc--CHHHHHHHHHhcCchhhhhhhhcc
Confidence 237899999999999999998776778988 5688999999999998 551111 1111000
Q ss_pred -cccccccchhhh----hhcCCcccccHHHHHHHHHHHHHHc
Q 040253 286 -NMKNMLFSSKKL----TDLGFKFKYSLDDMFTGAVDTCRAK 322 (338)
Q Consensus 286 -~~~~~~~~~~~~----~~lg~~~~~~~~~~i~~~~~~~~~~ 322 (338)
......+|+++. +++||.+....++.++++++++++.
T Consensus 372 ~~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~l~~~ 413 (427)
T 4f6c_A 372 REQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI 413 (427)
T ss_dssp HTSEECEECCHHHHHHHHHTTCCCCCCCHHHHHHHHHHHHHH
T ss_pred ccCCceeccHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Confidence 111234555544 4479988855677999999998875
No 60
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.4e-36 Score=254.16 Aligned_cols=224 Identities=24% Similarity=0.290 Sum_probs=173.4
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
|+. ||+||||||+||||++++++|+++|++|++++|+++....+ .++++++.+|++|.+++.++++++|+
T Consensus 1 M~~-m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~~~d~ 70 (227)
T 3dhn_A 1 MEK-VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE---------NEHLKVKKADVSSLDEVCEVCKGADA 70 (227)
T ss_dssp --C-CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC---------CTTEEEECCCTTCHHHHHHHHTTCSE
T ss_pred CCC-CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc---------cCceEEEEecCCCHHHHHHHhcCCCE
Confidence 554 68999999999999999999999999999999986543211 15799999999999999999999999
Q ss_pred EEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCC
Q 040253 81 VFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTG 160 (338)
Q Consensus 81 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~ 160 (338)
|||+|+.... . ...++.|+.++.++++++++.+ +++|||+||.++|+... .. ..|++ +..|.
T Consensus 71 vi~~a~~~~~----~-~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~~~~--~~-~~~~~---------~~~p~ 132 (227)
T 3dhn_A 71 VISAFNPGWN----N-PDIYDETIKVYLTIIDGVKKAG-VNRFLMVGGAGSLFIAP--GL-RLMDS---------GEVPE 132 (227)
T ss_dssp EEECCCC-----------CCSHHHHHHHHHHHHHHHTT-CSEEEEECCSTTSEEET--TE-EGGGT---------TCSCG
T ss_pred EEEeCcCCCC----C-hhHHHHHHHHHHHHHHHHHHhC-CCEEEEeCChhhccCCC--CC-ccccC---------CcchH
Confidence 9999986421 1 2478899999999999999998 89999999998876322 11 22222 34577
Q ss_pred chHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHH
Q 040253 161 WMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIF 240 (338)
Q Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 240 (338)
+.|+.+|..+|.+++.++++++++++++||+.+||++....... .+....+..+..++++|++|+|++++.
T Consensus 133 ~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~---------~~~~~~~~~~~~~~~i~~~Dva~ai~~ 203 (227)
T 3dhn_A 133 NILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTGRYR---------LGKDDMIVDIVGNSHISVEDYAAAMID 203 (227)
T ss_dssp GGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCCCCE---------EESSBCCCCTTSCCEEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhccCccEEEEeCCcccCCCcccccee---------ecCCCcccCCCCCcEEeHHHHHHHHHH
Confidence 89999999999999998877899999999999999986543211 122222223333889999999999999
Q ss_pred hhcCCCC-CCceEE-ecCCCCHH
Q 040253 241 LFEHPNA-KGRYIC-SSHPATIL 261 (338)
Q Consensus 241 ~l~~~~~-~~~~~~-~~~~~t~~ 261 (338)
+++++.. +++|++ ++++.++.
T Consensus 204 ~l~~~~~~g~~~~~~~~~~~~~~ 226 (227)
T 3dhn_A 204 ELEHPKHHQERFTIGYLEHHHHH 226 (227)
T ss_dssp HHHSCCCCSEEEEEECCSCCC--
T ss_pred HHhCccccCcEEEEEeehhcccC
Confidence 9999875 457876 56777775
No 61
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=100.00 E-value=7.5e-36 Score=280.03 Aligned_cols=304 Identities=13% Similarity=0.139 Sum_probs=215.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcC----------CCCCCcEEEEecccCCCCCchh
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLEL----------PKASTHLTLWKADLAEEGNFDE 73 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----------~~~~~~~~~~~~Dl~d~~~~~~ 73 (338)
.+|+|||||||||||++++++|.+.|++|++++|+.........+... ....++++++.+|+.|++.+.
T Consensus 149 ~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~- 227 (508)
T 4f6l_B 149 PLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV- 227 (508)
T ss_dssp CCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-
T ss_pred CCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-
Confidence 368999999999999999999988899999999988743332221110 001258999999999988888
Q ss_pred hhCCccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCcee--eeccCCCCCCcCCCCCCchh
Q 040253 74 PIRGCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGT--LDVEEHRKPVYDETSWSDLD 151 (338)
Q Consensus 74 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v--~~~~~~~~~~~~e~~~~~~~ 151 (338)
+..++|+|||+|+.... ..+...+++.|+.++.+++++|.+ + .++|||+||.++ |........+++|+++..
T Consensus 228 ~~~~~D~Vih~Aa~~~~--~~~~~~~~~~Nv~gt~~ll~~a~~-~-~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~-- 301 (508)
T 4f6l_B 228 LPENMDTIIHAGARTDH--FGDDDEFEKVNVQGTVDVIRLAQQ-H-HARLIYVSTISVGTYFDIDTEDVTFSEADVYK-- 301 (508)
T ss_dssp CSSCCSEEEECCCC----------CCHHHHHHHHHHHHHHHHT-T-TCEEEEEEESCTTSEECTTCSCCEECTTCSCS--
T ss_pred CccCCCEEEECCceecC--CCCHHHHhhhHHHHHHHHHHHHHh-C-CCcEEEeCChhhccCCccCCcCcccccccccc--
Confidence 77899999999997653 234457899999999999999998 5 689999999999 322223456778887422
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCC-----hhHHHhhhhcccCC-CCCCC-CC
Q 040253 152 FVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMP-----PSLITALSPITRNE-AHYPI-IK 224 (338)
Q Consensus 152 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~-~~ 224 (338)
...|.+.|+.+|+.+|.+++.+++ .|++++++||++|||+...+.+. ..+...+....... ..... ..
T Consensus 302 ----~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~ 376 (508)
T 4f6l_B 302 ----GQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEM 376 (508)
T ss_dssp ----SBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGS
T ss_pred ----cccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCc
Confidence 234788999999999999999765 69999999999999998665421 11222222221221 11222 22
Q ss_pred CCccccHHHHHHHHHHhhcCCCCCCceEE-ecCCCCHHHHHHHHHHhCCCCCCCCCCCCcc------------------c
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPNAKGRYIC-SSHPATILELAKFLREKYPEFNVPTEFEDVD------------------E 285 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~~~~~~~~-~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~------------------~ 285 (338)
.++|+|++|+|++++.++..+..+++||+ +++++|+.|+++.+.+.. ...++ ...+. .
T Consensus 377 ~~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~-~~~~~--~~~w~~~l~~~~~~~~~~~~~~~~ 453 (508)
T 4f6l_B 377 PVDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE-IELVS--DESFNEILQKQDMYETIGLTSVDR 453 (508)
T ss_dssp EEECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC-CEEEC--HHHHHHHHHTTCCHHHHHHHHTGG
T ss_pred eEEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC-CcccC--HHHHHHHHHhcCCccchhcccccc
Confidence 37899999999999999998776779988 567899999999999753 11111 00000 0
Q ss_pred cccccccchhh----hhhcCCcccccHHHHHHHHHHHHHHc
Q 040253 286 NMKNMLFSSKK----LTDLGFKFKYSLDDMFTGAVDTCRAK 322 (338)
Q Consensus 286 ~~~~~~~~~~~----~~~lg~~~~~~~~~~i~~~~~~~~~~ 322 (338)
......+|+++ ++++||.+....++.++++++++++.
T Consensus 454 ~~~~~~~d~~~~~~~l~~~G~~~~~~~~~~l~~~~~~~~~~ 494 (508)
T 4f6l_B 454 EQQLAMIDTTLTLKIMNHISEKWPTITNNWLYHWAQYIKTI 494 (508)
T ss_dssp GSEECEECCHHHHHHHHHHSCCCCCCCHHHHHHHHHHHHHH
T ss_pred cCcceecchHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHHH
Confidence 11233455544 34579988866788899999988775
No 62
>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.7e-35 Score=271.13 Aligned_cols=261 Identities=16% Similarity=0.139 Sum_probs=191.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHC---CCeEEEEEcCCCcHHHHHHHhcCCCC-------------CCcEEEEecccCC
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLER---GYAVRATVRDPDNKKKVKHLLELPKA-------------STHLTLWKADLAE 67 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~d 67 (338)
.+|+|||||||||||++++++|++. |++|++++|+.........+...... ..+++++.+|+++
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~ 151 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSE 151 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCC
Confidence 4789999999999999999999998 89999999988765444433221111 1589999999984
Q ss_pred ------CCCchhhhCCccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCC
Q 040253 68 ------EGNFDEPIRGCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPV 141 (338)
Q Consensus 68 ------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~ 141 (338)
.+.+.++++++|+|||+|+.... .+..+.++.|+.++.+++++|.+.+ +++|||+||.++|+ .....+
T Consensus 152 ~~~gld~~~~~~~~~~~D~Vih~Aa~~~~---~~~~~~~~~Nv~gt~~ll~aa~~~~-~~~~V~iSS~~v~~--~~~~~~ 225 (478)
T 4dqv_A 152 PDLGLDQPMWRRLAETVDLIVDSAAMVNA---FPYHELFGPNVAGTAELIRIALTTK-LKPFTYVSTADVGA--AIEPSA 225 (478)
T ss_dssp GGGGCCHHHHHHHHHHCCEEEECCSSCSB---SSCCEEHHHHHHHHHHHHHHHTSSS-CCCEEEEEEGGGGT--TSCTTT
T ss_pred cccCCCHHHHHHHHcCCCEEEECccccCC---cCHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEEeehhhcC--ccCCCC
Confidence 45677788899999999998765 3445789999999999999999988 88999999999997 444556
Q ss_pred cCCCCCCchhhh--hhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCC---CChhHHHhhhhc--c
Q 040253 142 YDETSWSDLDFV--RSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSS---MPPSLITALSPI--T 214 (338)
Q Consensus 142 ~~e~~~~~~~~~--~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~--~ 214 (338)
++|+++...... .......+.|+.+|+.+|.+++.++++.|++++++||++|||+..... ....+...+... .
T Consensus 226 ~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~ 305 (478)
T 4dqv_A 226 FTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMAT 305 (478)
T ss_dssp CCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHH
T ss_pred cCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHc
Confidence 777763211000 000012356999999999999999988899999999999999864221 222222222111 1
Q ss_pred cC-CCCCC----C----CCCCccccHHHHHHHHHHhhcC----C-CCCCceEEe-cCC--CCHHHHHHHHHHh
Q 040253 215 RN-EAHYP----I----IKQGQFVHLDDLCSAHIFLFEH----P-NAKGRYICS-SHP--ATILELAKFLREK 270 (338)
Q Consensus 215 ~~-~~~~~----~----~~~~~~i~v~D~a~~~~~~l~~----~-~~~~~~~~~-~~~--~t~~e~~~~i~~~ 270 (338)
+. +..+. . ...++++|++|+|++++.++.+ + ..+++||++ +++ +|+.|+++.+.+.
T Consensus 306 g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~ 378 (478)
T 4dqv_A 306 GIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA 378 (478)
T ss_dssp CEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT
T ss_pred CcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc
Confidence 21 11111 1 1236899999999999999875 2 335689984 565 9999999999985
No 63
>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}
Probab=100.00 E-value=2.8e-35 Score=254.55 Aligned_cols=263 Identities=21% Similarity=0.160 Sum_probs=196.0
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC--ccEEEE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG--CTGVFH 83 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d~vi~ 83 (338)
|+||||||+||||++++++|++ |++|++++|++... ++ +.+|++|++++.+++++ +|+|||
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~-------------~~---~~~Dl~~~~~~~~~~~~~~~d~vi~ 63 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ-------------GG---YKLDLTDFPRLEDFIIKKRPDVIIN 63 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT-------------TC---EECCTTSHHHHHHHHHHHCCSEEEE
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC-------------CC---ceeccCCHHHHHHHHHhcCCCEEEE
Confidence 4899999999999999999994 89999999986421 12 78999999999998875 999999
Q ss_pred ecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCch
Q 040253 84 LATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWM 162 (338)
Q Consensus 84 ~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~ 162 (338)
+|+..... ........++.|+.++.++++++.+.+ . +|||+||.++|+.. ..+++|++ +..|.+.
T Consensus 64 ~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~-~iv~~SS~~~~~~~---~~~~~e~~---------~~~~~~~ 129 (273)
T 2ggs_A 64 AAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVID-S-YIVHISTDYVFDGE---KGNYKEED---------IPNPINY 129 (273)
T ss_dssp CCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTT-C-EEEEEEEGGGSCSS---SCSBCTTS---------CCCCSSH
T ss_pred CCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhC-C-eEEEEecceeEcCC---CCCcCCCC---------CCCCCCH
Confidence 99965421 112345788999999999999999887 5 89999999999622 23677776 4457789
Q ss_pred HHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhh
Q 040253 163 YFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLF 242 (338)
Q Consensus 163 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l 242 (338)
|+.+|.++|.+++. ++++++||+.+||+. .+...+.. ....+........ .++++|++|+|++++.++
T Consensus 130 Y~~sK~~~e~~~~~------~~~~~iR~~~v~G~~---~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~ 197 (273)
T 2ggs_A 130 YGLSKLLGETFALQ------DDSLIIRTSGIFRNK---GFPIYVYK--TLKEGKTVFAFKG-YYSPISARKLASAILELL 197 (273)
T ss_dssp HHHHHHHHHHHHCC------TTCEEEEECCCBSSS---SHHHHHHH--HHHTTCCEEEESC-EECCCBHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC------CCeEEEecccccccc---HHHHHHHH--HHHcCCCEEeecC-CCCceEHHHHHHHHHHHH
Confidence 99999999998864 678999999999821 11111111 1112222221122 468999999999999999
Q ss_pred cCCCCCCceEEecCCCCHHHHHHHHHHhCCCCCC---CCCCCC-ccccccccccchhhhhh-cCCcc-cccHHHHH
Q 040253 243 EHPNAKGRYICSSHPATILELAKFLREKYPEFNV---PTEFED-VDENMKNMLFSSKKLTD-LGFKF-KYSLDDMF 312 (338)
Q Consensus 243 ~~~~~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~-lg~~~-~~~~~~~i 312 (338)
+++. .++||++++.+|+.|+++.+.+.+|.... +..... .+.......+|++++++ |||+| .++++++|
T Consensus 198 ~~~~-~g~~~i~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~~~l~~~~ 272 (273)
T 2ggs_A 198 ELRK-TGIIHVAGERISRFELALKIKEKFNLPGEVKEVDEVRGWIAKRPYDSSLDSSRARKILSTDFYTLDLDGMV 272 (273)
T ss_dssp HHTC-CEEEECCCCCEEHHHHHHHHHHHTTCCSCEEEESSCTTCCSCCCSBCCBCCHHHHHHCSSCCCSCCGGGCC
T ss_pred hcCc-CCeEEECCCcccHHHHHHHHHHHhCCChhhcccccccccccCCCcccccCHHHHHHHhCCCCCCccccccc
Confidence 8764 56899866889999999999999975311 111101 12233456789999998 99999 67788764
No 64
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=100.00 E-value=1e-34 Score=250.22 Aligned_cols=236 Identities=20% Similarity=0.205 Sum_probs=187.9
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
||+||||||+||||++++++|+++|++|++++|++.... . .+++++.+|++|++.+.++++++|+|||+
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--------~---~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 70 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA--------E---AHEEIVACDLADAQAVHDLVKDCDGIIHL 70 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC--------C---TTEEECCCCTTCHHHHHHHHTTCSEEEEC
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc--------C---CCccEEEccCCCHHHHHHHHcCCCEEEEC
Confidence 679999999999999999999999999999999765311 0 36799999999999999999999999999
Q ss_pred cccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHH
Q 040253 85 ATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYF 164 (338)
Q Consensus 85 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~ 164 (338)
|+... .......++.|+.++.++++++.+.+ +++|||+||.++|+... ...+++|++ +..|.+.|+
T Consensus 71 a~~~~---~~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~~~-~~~~~~E~~---------~~~~~~~Y~ 136 (267)
T 3ay3_A 71 GGVSV---ERPWNDILQANIIGAYNLYEAARNLG-KPRIVFASSNHTIGYYP-RTTRIDTEV---------PRRPDSLYG 136 (267)
T ss_dssp CSCCS---CCCHHHHHHHTHHHHHHHHHHHHHTT-CCEEEEEEEGGGSTTSB-TTSCBCTTS---------CCCCCSHHH
T ss_pred CcCCC---CCCHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeCCHHHhCCCC-CCCCCCCCC---------CCCCCChHH
Confidence 99652 23345788999999999999999888 88999999999997322 245677876 445778999
Q ss_pred HHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcC
Q 040253 165 VSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEH 244 (338)
Q Consensus 165 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~ 244 (338)
.+|..+|.+++.++++++++++++||+.+|+... . + ...++++|++|+|+++..++++
T Consensus 137 ~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~----~-----------~-------~~~~~~~~~~dva~~~~~~~~~ 194 (267)
T 3ay3_A 137 LSKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK----D-----------A-------RMMATWLSVDDFMRLMKRAFVA 194 (267)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC----S-----------H-------HHHHHBCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC----C-----------C-------CeeeccccHHHHHHHHHHHHhC
Confidence 9999999999998888899999999999984210 0 0 0015799999999999999988
Q ss_pred CCC-CCceEEecCCCCHHHHHHHHHHhCCCCCCCCCCCCccccccccccchhhhhhcCCcccccHHHHHHHHHH
Q 040253 245 PNA-KGRYICSSHPATILELAKFLREKYPEFNVPTEFEDVDENMKNMLFSSKKLTDLGFKFKYSLDDMFTGAVD 317 (338)
Q Consensus 245 ~~~-~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~i~~~~~ 317 (338)
+.. .++|++.+.. .....+..+++.+||+|+++++++++++.+
T Consensus 195 ~~~~~~~~~~~~~~------------------------------~~~~~d~~~~~~lg~~p~~~~~~~~~~~~~ 238 (267)
T 3ay3_A 195 PKLGCTVVYGASAN------------------------------TESWWDNDKSAFLGWVPQDSSEIWREEIEQ 238 (267)
T ss_dssp SCCCEEEEEECCSC------------------------------SSCCBCCGGGGGGCCCCCCCGGGGHHHHHH
T ss_pred CCCCceeEecCCCc------------------------------cccccCHHHHHHcCCCCCCCHHHHHHHHHh
Confidence 654 3456653211 112344555555999999999999988754
No 65
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=100.00 E-value=3.6e-34 Score=249.37 Aligned_cols=256 Identities=19% Similarity=0.227 Sum_probs=192.4
Q ss_pred cEEEEeCCchhhHHHHHHHHHHC--CCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLER--GYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
|+|||||||||||++++++|+++ |++|++++|++.....+.. .+++++.+|++|++++.++++++|+|||
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~--------~~~~~~~~D~~d~~~l~~~~~~~d~vi~ 72 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD--------QGVEVRHGDYNQPESLQKAFAGVSKLLF 72 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH--------TTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh--------cCCeEEEeccCCHHHHHHHHhcCCEEEE
Confidence 57999999999999999999998 9999999998766544322 4689999999999999999999999999
Q ss_pred ecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchH
Q 040253 84 LATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 163 (338)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y 163 (338)
+|+.. .. . +.|+.++.++++++++.+ +++|||+||.+++. . | ..|
T Consensus 73 ~a~~~------~~-~--~~n~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~------------~------------~-~~y 117 (287)
T 2jl1_A 73 ISGPH------YD-N--TLLIVQHANVVKAARDAG-VKHIAYTGYAFAEE------------S------------I-IPL 117 (287)
T ss_dssp CCCCC------SC-H--HHHHHHHHHHHHHHHHTT-CSEEEEEEETTGGG------------C------------C-STH
T ss_pred cCCCC------cC-c--hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCC------------C------------C-Cch
Confidence 99852 11 1 579999999999999988 89999999987752 0 1 279
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhc
Q 040253 164 FVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFE 243 (338)
Q Consensus 164 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~ 243 (338)
+.+|..+|.+++ ++|++++++||+.++|+... ..+..... .+..........++++|++|+|++++.+++
T Consensus 118 ~~~K~~~E~~~~----~~~~~~~ilrp~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 187 (287)
T 2jl1_A 118 AHVHLATEYAIR----TTNIPYTFLRNALYTDFFVN----EGLRASTE--SGAIVTNAGSGIVNSVTRNELALAAATVLT 187 (287)
T ss_dssp HHHHHHHHHHHH----HTTCCEEEEEECCBHHHHSS----GGGHHHHH--HTEEEESCTTCCBCCBCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH----HcCCCeEEEECCEeccccch----hhHHHHhh--CCceeccCCCCccCccCHHHHHHHHHHHhc
Confidence 999999999885 36999999999998886421 12221111 121111112233789999999999999998
Q ss_pred CCCC-CCceEEe-cCCCCHHHHHHHHHHhCCCCCCCCC-CC-----------Cccccc-------------cccccchhh
Q 040253 244 HPNA-KGRYICS-SHPATILELAKFLREKYPEFNVPTE-FE-----------DVDENM-------------KNMLFSSKK 296 (338)
Q Consensus 244 ~~~~-~~~~~~~-~~~~t~~e~~~~i~~~~~~~~~~~~-~~-----------~~~~~~-------------~~~~~~~~~ 296 (338)
++.. +++||++ ++.+|+.|+++.+.+.+|.. .+.. .+ ..+... .....|+++
T Consensus 188 ~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (287)
T 2jl1_A 188 EEGHENKTYNLVSNQPWTFDELAQILSEVSGKK-VVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDD 266 (287)
T ss_dssp SSSCTTEEEEECCSSCBCHHHHHHHHHHHHSSC-CEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSH
T ss_pred CCCCCCcEEEecCCCcCCHHHHHHHHHHHHCCc-ceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchH
Confidence 7644 4589885 46899999999999998742 2211 11 011100 124557788
Q ss_pred hhh-cCCcccccHHHHHHHHHH
Q 040253 297 LTD-LGFKFKYSLDDMFTGAVD 317 (338)
Q Consensus 297 ~~~-lg~~~~~~~~~~i~~~~~ 317 (338)
+++ || |.++++++|+++++
T Consensus 267 ~~~~lG--~~~~l~e~l~~~~~ 286 (287)
T 2jl1_A 267 LQKLIG--SLTPLKETVKQALK 286 (287)
T ss_dssp HHHHHS--SCCCHHHHHHHHHT
T ss_pred HHHHhC--CCCCHHHHHHHHhc
Confidence 887 99 66699999999875
No 66
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=100.00 E-value=6.7e-34 Score=253.68 Aligned_cols=234 Identities=15% Similarity=0.213 Sum_probs=183.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHC-CC-eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLER-GY-AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
+|+||||||||+||++++++|++. |+ +|++++|++.+...+..... ..+++++.+|++|.+++.++++++|+||
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~~~~~D~Vi 96 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYALEGVDICI 96 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHHTTTCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHHHhcCCEEE
Confidence 589999999999999999999999 97 99999998665544433222 1578999999999999999999999999
Q ss_pred EecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCc
Q 040253 83 HLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGW 161 (338)
Q Consensus 83 ~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~ 161 (338)
|+||..... ......+.+++|+.++.++++++...+ +++||++||..++. |.+
T Consensus 97 h~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~-v~~~V~~SS~~~~~-------------------------p~~ 150 (344)
T 2gn4_A 97 HAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNA-ISQVIALSTDKAAN-------------------------PIN 150 (344)
T ss_dssp ECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTT-CSEEEEECCGGGSS-------------------------CCS
T ss_pred ECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEecCCccCC-------------------------Ccc
Confidence 999865411 112234789999999999999999998 89999999976552 456
Q ss_pred hHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccC-CCCCCCCCC-CccccHHHHHH
Q 040253 162 MYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRN-EAHYPIIKQ-GQFVHLDDLCS 236 (338)
Q Consensus 162 ~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~i~v~D~a~ 236 (338)
.|+.+|.++|.+++.++++ .|++++++|||++||++.. ....+.. ....+. +..+..+.. ++|+|++|+|+
T Consensus 151 ~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~--~i~~~~~--~~~~g~~~~~i~~~~~~r~~i~v~D~a~ 226 (344)
T 2gn4_A 151 LYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGS--VVPFFKK--LVQNKASEIPITDIRMTRFWITLDEGVS 226 (344)
T ss_dssp HHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTS--HHHHHHH--HHHHTCCCEEESCTTCEEEEECHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCC--HHHHHHH--HHHcCCCceEEeCCCeEEeeEEHHHHHH
Confidence 9999999999999988764 4899999999999998732 1111111 111233 322333333 67999999999
Q ss_pred HHHHhhcCCCCCCceEEecCCCCHHHHHHHHHHhCC
Q 040253 237 AHIFLFEHPNAKGRYICSSHPATILELAKFLREKYP 272 (338)
Q Consensus 237 ~~~~~l~~~~~~~~~~~~~~~~t~~e~~~~i~~~~~ 272 (338)
+++.++++...+++|++++..+|+.|+++.+.+.++
T Consensus 227 ~v~~~l~~~~~g~~~~~~~~~~s~~el~~~i~~~~~ 262 (344)
T 2gn4_A 227 FVLKSLKRMHGGEIFVPKIPSMKMTDLAKALAPNTP 262 (344)
T ss_dssp HHHHHHHHCCSSCEEEECCCEEEHHHHHHHHCTTCC
T ss_pred HHHHHHhhccCCCEEecCCCcEEHHHHHHHHHHhCC
Confidence 999999886656689987778999999999987653
No 67
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=100.00 E-value=4e-34 Score=239.28 Aligned_cols=209 Identities=16% Similarity=0.211 Sum_probs=171.0
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCC-CCCchhhhCCccEEEEe
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAE-EGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~~~d~vi~~ 84 (338)
|+||||||+||||++++++|+++|++|++++|+++..... ++++++.+|++| ++++.++++++|+|||+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~----------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ 70 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY----------NNVKAVHFDVDWTPEEMAKQLHGMDAIINV 70 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC----------TTEEEEECCTTSCHHHHHTTTTTCSEEEEC
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc----------CCceEEEecccCCHHHHHHHHcCCCEEEEC
Confidence 4899999999999999999999999999999986543211 578999999999 99999999999999999
Q ss_pred cccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHH
Q 040253 85 ATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYF 164 (338)
Q Consensus 85 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~ 164 (338)
|+... ...++.|+.++.++++++++.+ +++||++||.++++. .+..| . +..|.+.|+
T Consensus 71 ag~~~-------~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~~-----~~~~e-~---------~~~~~~~Y~ 127 (219)
T 3dqp_A 71 SGSGG-------KSLLKVDLYGAVKLMQAAEKAE-VKRFILLSTIFSLQP-----EKWIG-A---------GFDALKDYY 127 (219)
T ss_dssp CCCTT-------SSCCCCCCHHHHHHHHHHHHTT-CCEEEEECCTTTTCG-----GGCCS-H---------HHHHTHHHH
T ss_pred CcCCC-------CCcEeEeHHHHHHHHHHHHHhC-CCEEEEECcccccCC-----Ccccc-c---------ccccccHHH
Confidence 99644 2468899999999999999988 899999999877641 23333 2 334678999
Q ss_pred HHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcC
Q 040253 165 VSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEH 244 (338)
Q Consensus 165 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~ 244 (338)
.+|..+|.+++ +..+++++++||+.+||+....... .+ ...+++++++|+|++++.++++
T Consensus 128 ~sK~~~e~~~~---~~~~i~~~ilrp~~v~g~~~~~~~~----------~~-------~~~~~~i~~~Dva~~i~~~l~~ 187 (219)
T 3dqp_A 128 IAKHFADLYLT---KETNLDYTIIQPGALTEEEATGLID----------IN-------DEVSASNTIGDVADTIKELVMT 187 (219)
T ss_dssp HHHHHHHHHHH---HSCCCEEEEEEECSEECSCCCSEEE----------ES-------SSCCCCEEHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHH---hccCCcEEEEeCceEecCCCCCccc----------cC-------CCcCCcccHHHHHHHHHHHHhC
Confidence 99999999986 4679999999999999986433211 01 2237899999999999999998
Q ss_pred CCC-CCceEEecCCCCHHHHHHHH
Q 040253 245 PNA-KGRYICSSHPATILELAKFL 267 (338)
Q Consensus 245 ~~~-~~~~~~~~~~~t~~e~~~~i 267 (338)
+.. +++||++++..+++|+.+.-
T Consensus 188 ~~~~g~~~~i~~g~~~~~e~~~~~ 211 (219)
T 3dqp_A 188 DHSIGKVISMHNGKTAIKEALESL 211 (219)
T ss_dssp GGGTTEEEEEEECSEEHHHHHHTT
T ss_pred ccccCcEEEeCCCCccHHHHHHHH
Confidence 765 45899977779999988753
No 68
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=100.00 E-value=1.1e-32 Score=233.15 Aligned_cols=214 Identities=17% Similarity=0.262 Sum_probs=171.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcE-EEEecccCCCCCchhhhCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHL-TLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
++|+||||||||+||++++++|+++|++|++++|+++....+.. .++ +++.+|++ +++.+++.++|+||
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~--------~~~~~~~~~Dl~--~~~~~~~~~~D~vi 89 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE--------RGASDIVVANLE--EDFSHAFASIDAVV 89 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH--------TTCSEEEECCTT--SCCGGGGTTCSEEE
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh--------CCCceEEEcccH--HHHHHHHcCCCEEE
Confidence 46899999999999999999999999999999999877655443 478 99999998 88889999999999
Q ss_pred EecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCch
Q 040253 83 HLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWM 162 (338)
Q Consensus 83 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~ 162 (338)
|+|+.... ......+++|+.++.++++++++.+ +++||++||...+. . +.. + .+.+.
T Consensus 90 ~~ag~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~-~~~iv~~SS~~~~~---~------~~~---------~-~~~~~ 146 (236)
T 3e8x_A 90 FAAGSGPH---TGADKTILIDLWGAIKTIQEAEKRG-IKRFIMVSSVGTVD---P------DQG---------P-MNMRH 146 (236)
T ss_dssp ECCCCCTT---SCHHHHHHTTTHHHHHHHHHHHHHT-CCEEEEECCTTCSC---G------GGS---------C-GGGHH
T ss_pred ECCCCCCC---CCccccchhhHHHHHHHHHHHHHcC-CCEEEEEecCCCCC---C------CCC---------h-hhhhh
Confidence 99996542 3456789999999999999999988 89999999954432 1 111 1 25679
Q ss_pred HHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhh
Q 040253 163 YFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLF 242 (338)
Q Consensus 163 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l 242 (338)
|+.+|..+|.+++ +.|++++++||+.++|+........ .. ......++++++|+|++++.++
T Consensus 147 Y~~sK~~~e~~~~----~~gi~~~~lrpg~v~~~~~~~~~~~---------~~-----~~~~~~~~i~~~Dva~~~~~~~ 208 (236)
T 3e8x_A 147 YLVAKRLADDELK----RSSLDYTIVRPGPLSNEESTGKVTV---------SP-----HFSEITRSITRHDVAKVIAELV 208 (236)
T ss_dssp HHHHHHHHHHHHH----HSSSEEEEEEECSEECSCCCSEEEE---------ES-----SCSCCCCCEEHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH----HCCCCEEEEeCCcccCCCCCCeEEe---------cc-----CCCcccCcEeHHHHHHHHHHHh
Confidence 9999999999885 5799999999999999864321100 00 1111268999999999999999
Q ss_pred cCCCC-CCceEEecCCCCHHHHHHHHH
Q 040253 243 EHPNA-KGRYICSSHPATILELAKFLR 268 (338)
Q Consensus 243 ~~~~~-~~~~~~~~~~~t~~e~~~~i~ 268 (338)
+++.. +++|++++...++.|+++.++
T Consensus 209 ~~~~~~g~~~~v~~~~~~~~e~~~~i~ 235 (236)
T 3e8x_A 209 DQQHTIGKTFEVLNGDTPIAKVVEQLG 235 (236)
T ss_dssp TCGGGTTEEEEEEECSEEHHHHHHTC-
T ss_pred cCccccCCeEEEeCCCcCHHHHHHHhc
Confidence 98754 558888666899999998765
No 69
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=100.00 E-value=1.1e-33 Score=246.21 Aligned_cols=255 Identities=16% Similarity=0.197 Sum_probs=185.0
Q ss_pred EEEEeCCchhhHHHHHHHHHHC--CCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 7 TVCVTGASGFIGSWLIMRLLER--GYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 7 ~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
+|||||||||||++++++|+++ |++|++++|+++....+.. .+++++.+|++|++++.++++++|+|||+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~--------~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ 72 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA--------QGITVRQADYGDEAALTSALQGVEKLLLI 72 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH--------TTCEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc--------CCCeEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence 5899999999999999999998 9999999998766543332 46899999999999999999999999999
Q ss_pred cccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHH
Q 040253 85 ATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYF 164 (338)
Q Consensus 85 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~ 164 (338)
|+... ..|+.++.++++++++.+ +++|||+||.++|. . | ..|+
T Consensus 73 a~~~~-----------~~~~~~~~~l~~a~~~~~-~~~~v~~Ss~~~~~------------~------------~-~~y~ 115 (286)
T 2zcu_A 73 SSSEV-----------GQRAPQHRNVINAAKAAG-VKFIAYTSLLHADT------------S------------P-LGLA 115 (286)
T ss_dssp C-------------------CHHHHHHHHHHHHT-CCEEEEEEETTTTT------------C------------C-STTH
T ss_pred CCCCc-----------hHHHHHHHHHHHHHHHcC-CCEEEEECCCCCCC------------C------------c-chhH
Confidence 98421 147889999999999988 89999999987651 0 1 2799
Q ss_pred HHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC-CCCccccHHHHHHHHHHhhc
Q 040253 165 VSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII-KQGQFVHLDDLCSAHIFLFE 243 (338)
Q Consensus 165 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~v~D~a~~~~~~l~ 243 (338)
.+|..+|.+++. .+++++++||+.++++.. ..+..... +....++.+ ..++++|++|+|++++.+++
T Consensus 116 ~sK~~~e~~~~~----~~~~~~ilrp~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~ 183 (286)
T 2zcu_A 116 DEHIETEKMLAD----SGIVYTLLRNGWYSENYL-----ASAPAALE---HGVFIGAAGDGKIASATRADYAAAAARVIS 183 (286)
T ss_dssp HHHHHHHHHHHH----HCSEEEEEEECCBHHHHH-----TTHHHHHH---HTEEEESCTTCCBCCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH----cCCCeEEEeChHHhhhhH-----HHhHHhhc---CCceeccCCCCccccccHHHHHHHHHHHhc
Confidence 999999998853 599999999987766431 11111111 111112222 23789999999999999998
Q ss_pred CCC-CCCceEEec-CCCCHHHHHHHHHHhCCCCCCCCC-CC-----------Cccccc-------------cccccchhh
Q 040253 244 HPN-AKGRYICSS-HPATILELAKFLREKYPEFNVPTE-FE-----------DVDENM-------------KNMLFSSKK 296 (338)
Q Consensus 244 ~~~-~~~~~~~~~-~~~t~~e~~~~i~~~~~~~~~~~~-~~-----------~~~~~~-------------~~~~~~~~~ 296 (338)
++. .+++||+++ +.+|+.|+++.+.+.+|.. .+.. .+ ..+... .....++++
T Consensus 184 ~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (286)
T 2zcu_A 184 EAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQ-VTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKT 262 (286)
T ss_dssp SSSCTTCEEEECCSSCBCHHHHHHHHHHHHSSC-CEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCH
T ss_pred CCCCCCceEEEeCCCcCCHHHHHHHHHHHHCCC-CceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchH
Confidence 754 356898855 6899999999999998742 2111 11 011100 124456778
Q ss_pred hhh-cCCcccccHHHHHHHHHHHHH
Q 040253 297 LTD-LGFKFKYSLDDMFTGAVDTCR 320 (338)
Q Consensus 297 ~~~-lg~~~~~~~~~~i~~~~~~~~ 320 (338)
+++ |||.| ++++++|+++++|+.
T Consensus 263 ~~~~lg~~~-~~~~e~l~~~~~~~~ 286 (286)
T 2zcu_A 263 LSKLIGHPT-TTLAESVSHLFNVNN 286 (286)
T ss_dssp HHHHHTSCC-CCHHHHHHGGGC---
T ss_pred HHHHhCcCC-CCHHHHHHHHHhhcC
Confidence 877 99854 599999999998863
No 70
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=100.00 E-value=2.3e-32 Score=248.23 Aligned_cols=236 Identities=12% Similarity=0.018 Sum_probs=181.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC-CeEEEEEcCCCcHHHHHH-HhcC-CCCCCcEEEEecccCCCCCchhhh--CCcc
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG-YAVRATVRDPDNKKKVKH-LLEL-PKASTHLTLWKADLAEEGNFDEPI--RGCT 79 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d 79 (338)
+|+||||||||+||++++++|+++| ++|++++|+......+.. +... +....+++++.+|++|++.+..++ .++|
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D 114 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQYD 114 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCCS
T ss_pred CCEEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCCC
Confidence 6899999999999999999999999 799999997665444322 1111 111257999999999998777776 4899
Q ss_pred EEEEecccCCCCCCCcc---chhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhc
Q 040253 80 GVFHLATPMDFESKDPE---NEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSV 156 (338)
Q Consensus 80 ~vi~~a~~~~~~~~~~~---~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~ 156 (338)
+|||+||.......... .+.+++|+.++.++++++...+ +++||++||....
T Consensus 115 ~Vih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~g-v~r~V~iSS~~~~------------------------ 169 (399)
T 3nzo_A 115 YVLNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAG-AKKYFCVSTDKAA------------------------ 169 (399)
T ss_dssp EEEECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTT-CSEEEEECCSCSS------------------------
T ss_pred EEEECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEeCCCCC------------------------
Confidence 99999997553222222 4789999999999999999999 8999999995322
Q ss_pred cCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhh-hhcccCCCCCCCCCCCccccHHHHH
Q 040253 157 KMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITAL-SPITRNEAHYPIIKQGQFVHLDDLC 235 (338)
Q Consensus 157 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~v~D~a 235 (338)
.|.+.|+.+|..+|.+++.++++ ++++++||+++||+.. ..+..+. ....+.+........++|+|++|+|
T Consensus 170 -~p~~~Yg~sK~~~E~~~~~~~~~--~~~~~vR~g~v~G~~~-----~~i~~~~~~i~~g~~~~~~gd~~r~~v~v~D~a 241 (399)
T 3nzo_A 170 -NPVNMMGASKRIMEMFLMRKSEE--IAISTARFANVAFSDG-----SLLHGFNQRIQKNQPIVAPNDIKRYFVTPQESG 241 (399)
T ss_dssp -CCCSHHHHHHHHHHHHHHHHTTT--SEEEEECCCEETTCTT-----SHHHHHHHHHHTTCCEEEESSCEECEECHHHHH
T ss_pred -CCcCHHHHHHHHHHHHHHHHhhh--CCEEEeccceeeCCCC-----chHHHHHHHHHhCCCEecCCCCeeccCCHHHHH
Confidence 36679999999999999988765 9999999999999862 1111111 1223443333223336799999999
Q ss_pred HHHHHhhcCCCCCCceEE-ecCC---CCHHHHHHHHHHhCCC
Q 040253 236 SAHIFLFEHPNAKGRYIC-SSHP---ATILELAKFLREKYPE 273 (338)
Q Consensus 236 ~~~~~~l~~~~~~~~~~~-~~~~---~t~~e~~~~i~~~~~~ 273 (338)
++++.++.....+++|++ .+++ +|+.|+++.+.+.+|.
T Consensus 242 ~~~~~a~~~~~~g~i~~l~~g~~~~~~s~~ela~~l~~~~G~ 283 (399)
T 3nzo_A 242 ELCLMSCIFGENRDIFFPKLSEALHLISFADIAVKYLKQLGY 283 (399)
T ss_dssp HHHHHHHHHCCTTEEEEECCCTTCCCEEHHHHHHHHHHHTTC
T ss_pred HHHHHHhccCCCCCEEEecCCCCCCcccHHHHHHHHHHHhCC
Confidence 999999987666668866 4556 9999999999999883
No 71
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=100.00 E-value=2.9e-32 Score=234.74 Aligned_cols=211 Identities=19% Similarity=0.219 Sum_probs=174.3
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
||+||||||+|+||++++++|+++|++|++++|++.... ..+++++.+|++|.+++.++++++|+|||+
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~-----------~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~ 71 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA-----------GPNEECVQCDLADANAVNAMVAGCDGIVHL 71 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC-----------CTTEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc-----------CCCCEEEEcCCCCHHHHHHHHcCCCEEEEC
Confidence 689999999999999999999999999999999875432 157899999999999999999999999999
Q ss_pred cccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHH
Q 040253 85 ATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYF 164 (338)
Q Consensus 85 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~ 164 (338)
||... ..+.+..+++|+.++.++++++++.+ .++|||+||.++|+... ...+++|+. +..|.+.|+
T Consensus 72 Ag~~~---~~~~~~~~~~N~~g~~~l~~a~~~~~-~~~iv~~SS~~~~g~~~-~~~~~~e~~---------~~~~~~~Y~ 137 (267)
T 3rft_A 72 GGISV---EKPFEQILQGNIIGLYNLYEAARAHG-QPRIVFASSNHTIGYYP-QTERLGPDV---------PARPDGLYG 137 (267)
T ss_dssp CSCCS---CCCHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEEEEGGGGTTSB-TTSCBCTTS---------CCCCCSHHH
T ss_pred CCCcC---cCCHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEEcchHHhCCCC-CCCCCCCCC---------CCCCCChHH
Confidence 99743 34556889999999999999999988 88999999999996332 244667766 445778999
Q ss_pred HHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcC
Q 040253 165 VSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEH 244 (338)
Q Consensus 165 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~ 244 (338)
.+|..+|.+++.++++++++++++||+.++|+...+. ...+|++++|+++++..+++.
T Consensus 138 ~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~~~~----------------------~~~~~~~~~d~a~~~~~~~~~ 195 (267)
T 3rft_A 138 VSKCFGENLARMYFDKFGQETALVRIGSCTPEPNNYR----------------------MLSTWFSHDDFVSLIEAVFRA 195 (267)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCCSTT----------------------HHHHBCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCCCCC----------------------ceeeEEcHHHHHHHHHHHHhC
Confidence 9999999999999989999999999999998732110 014689999999999999998
Q ss_pred CCCCC-ceE-EecCCCCHHH
Q 040253 245 PNAKG-RYI-CSSHPATILE 262 (338)
Q Consensus 245 ~~~~~-~~~-~~~~~~t~~e 262 (338)
+..++ +++ +++++.++.+
T Consensus 196 ~~~~~~~~~~~s~~~~~~~~ 215 (267)
T 3rft_A 196 PVLGCPVVWGASANDAGWWD 215 (267)
T ss_dssp SCCCSCEEEECCCCTTCCBC
T ss_pred CCCCceEEEEeCCCCCCccc
Confidence 77654 454 4555554443
No 72
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=99.98 E-value=3.7e-32 Score=245.05 Aligned_cols=211 Identities=16% Similarity=0.128 Sum_probs=170.7
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
|+|||||||||||++++++|+++|+ +|++++|+ .|++++.++++++|+|||+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------------~d~~~l~~~~~~~d~Vih~ 53 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------------TKEEELESALLKADFIVHL 53 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------------CCHHHHHHHHHHCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------------CCHHHHHHHhccCCEEEEC
Confidence 5899999999999999999999998 77776553 4566677788889999999
Q ss_pred cccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCcc-EEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchH
Q 040253 85 ATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVR-RLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 163 (338)
Q Consensus 85 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y 163 (338)
|+.... ......++.|+.++.++++++++.+ ++ +|||+||.++|+ .+.|
T Consensus 54 a~~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~-~~~~~v~~Ss~~~~~--------------------------~~~Y 103 (369)
T 3st7_A 54 AGVNRP---EHDKEFSLGNVSYLDHVLDILTRNT-KKPAILLSSSIQATQ--------------------------DNPY 103 (369)
T ss_dssp CCSBCT---TCSTTCSSSCCBHHHHHHHHHTTCS-SCCEEEEEEEGGGGS--------------------------CSHH
T ss_pred CcCCCC---CCHHHHHHHHHHHHHHHHHHHHHhC-CCCeEEEeCchhhcC--------------------------CCCc
Confidence 997653 2334678999999999999999988 65 999999999884 2489
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhh-hcccCCCCCCCCCC-CccccHHHHHHHHHHh
Q 040253 164 FVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALS-PITRNEAHYPIIKQ-GQFVHLDDLCSAHIFL 241 (338)
Q Consensus 164 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~i~v~D~a~~~~~~ 241 (338)
+.+|..+|++++.++++++++++++||+++||++..+.....+..++. ...+....+..+.. ++++|++|+|++++.+
T Consensus 104 ~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~ 183 (369)
T 3st7_A 104 GESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRA 183 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHH
Confidence 999999999999999989999999999999999876543333332222 22344433333333 7899999999999999
Q ss_pred hcCCCC--CCceEEe-cCCCCHHHHHHHHHHhCCC
Q 040253 242 FEHPNA--KGRYICS-SHPATILELAKFLREKYPE 273 (338)
Q Consensus 242 l~~~~~--~~~~~~~-~~~~t~~e~~~~i~~~~~~ 273 (338)
++++.. +++||++ ++.+|+.|+++.+.+.+|.
T Consensus 184 l~~~~~~~~~~~~i~~~~~~s~~e~~~~~~~~~g~ 218 (369)
T 3st7_A 184 IEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQS 218 (369)
T ss_dssp HHTCCCEETTEECCSCCEEEEHHHHHHHHHHHHHH
T ss_pred HhCCcccCCceEEeCCCCceeHHHHHHHHHHHhCC
Confidence 998877 6789885 5789999999999998763
No 73
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=99.97 E-value=3.3e-31 Score=222.21 Aligned_cols=216 Identities=16% Similarity=0.124 Sum_probs=159.5
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEec
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHLA 85 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 85 (338)
|+|||||||||||++++++|+++|++|++++|+++....+ .. ++++++.+|++|.++ +++.++|+|||+|
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~-----~~~~~~~~D~~d~~~--~~~~~~d~vi~~a 70 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR---LG-----ATVATLVKEPLVLTE--ADLDSVDAVVDAL 70 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH---TC-----TTSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc---cC-----CCceEEecccccccH--hhcccCCEEEECC
Confidence 5799999999999999999999999999999986554332 11 578999999999887 7888999999999
Q ss_pred ccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCC-CCCcCCCCCCchhhhhhccCCCchHH
Q 040253 86 TPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHR-KPVYDETSWSDLDFVRSVKMTGWMYF 164 (338)
Q Consensus 86 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~-~~~~~e~~~~~~~~~~~~~~p~~~Y~ 164 (338)
+.... ......|+.++.++++++++.+ ++||++||.++++..... ..+.+|.. .+.|.+.|+
T Consensus 71 g~~~~------~~~~~~n~~~~~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~---------~~~~~~~y~ 133 (224)
T 3h2s_A 71 SVPWG------SGRGYLHLDFATHLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPE---------SAASQPWYD 133 (224)
T ss_dssp CCCTT------SSCTHHHHHHHHHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCG---------GGGGSTTHH
T ss_pred ccCCC------cchhhHHHHHHHHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCC---------CCccchhhH
Confidence 97521 1235789999999999999988 799999998666522221 12333332 334578999
Q ss_pred HHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcC
Q 040253 165 VSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEH 244 (338)
Q Consensus 165 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~ 244 (338)
.+|..+|. +..+.++.+++++++||+.+||++.... +. .+...........++++++|+|++++.++++
T Consensus 134 ~sK~~~e~-~~~~~~~~~i~~~ivrp~~v~g~~~~~~----~~------~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~ 202 (224)
T 3h2s_A 134 GALYQYYE-YQFLQMNANVNWIGISPSEAFPSGPATS----YV------AGKDTLLVGEDGQSHITTGNMALAILDQLEH 202 (224)
T ss_dssp HHHHHHHH-HHHHTTCTTSCEEEEEECSBCCCCCCCC----EE------EESSBCCCCTTSCCBCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHH-HHHHHhcCCCcEEEEcCccccCCCcccC----ce------ecccccccCCCCCceEeHHHHHHHHHHHhcC
Confidence 99999994 4555556799999999999999854322 10 0111111122336899999999999999998
Q ss_pred CCC-CCceEEec-CCCC
Q 040253 245 PNA-KGRYICSS-HPAT 259 (338)
Q Consensus 245 ~~~-~~~~~~~~-~~~t 259 (338)
+.. +++|++++ ...+
T Consensus 203 ~~~~g~~~~~~~~~~~~ 219 (224)
T 3h2s_A 203 PTAIRDRIVVRDADLEH 219 (224)
T ss_dssp CCCTTSEEEEEECC---
T ss_pred ccccCCEEEEecCcchh
Confidence 765 55888754 4333
No 74
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=99.97 E-value=8.5e-32 Score=240.64 Aligned_cols=224 Identities=17% Similarity=0.161 Sum_probs=168.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc-HHHHH---HHhcCCCCCCcEEEEecccCCCCCchhhhC--Cc
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN-KKKVK---HLLELPKASTHLTLWKADLAEEGNFDEPIR--GC 78 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~---~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~ 78 (338)
+|+|||||||||||++++++|++.|++|++++|++.. ..+.. .+.. .+++++.+|++|.+++.++++ ++
T Consensus 10 ~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~-----~~v~~~~~Dl~d~~~l~~~~~~~~~ 84 (346)
T 3i6i_A 10 KGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALED-----KGAIIVYGLINEQEAMEKILKEHEI 84 (346)
T ss_dssp -CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHH-----TTCEEEECCTTCHHHHHHHHHHTTC
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHh-----CCcEEEEeecCCHHHHHHHHhhCCC
Confidence 4689999999999999999999999999999997622 22222 2221 578999999999999999999 99
Q ss_pred cEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccC
Q 040253 79 TGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKM 158 (338)
Q Consensus 79 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~ 158 (338)
|+|||+|+. .|+.++.+++++|++.+++++||+ | +|| . ..+|.+ +..
T Consensus 85 d~Vi~~a~~--------------~n~~~~~~l~~aa~~~g~v~~~v~-S---~~g--~----~~~e~~---------~~~ 131 (346)
T 3i6i_A 85 DIVVSTVGG--------------ESILDQIALVKAMKAVGTIKRFLP-S---EFG--H----DVNRAD---------PVE 131 (346)
T ss_dssp CEEEECCCG--------------GGGGGHHHHHHHHHHHCCCSEEEC-S---CCS--S----CTTTCC---------CCT
T ss_pred CEEEECCch--------------hhHHHHHHHHHHHHHcCCceEEee-c---ccC--C----CCCccC---------cCC
Confidence 999999985 277888999999998876788885 3 454 1 133443 334
Q ss_pred CCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC-CCccccHHHHHHH
Q 040253 159 TGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK-QGQFVHLDDLCSA 237 (338)
Q Consensus 159 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~~ 237 (338)
|.+.|+.+|..+|++++. .|++++++||+.++|........... .....+....++.+. .++|+|++|+|++
T Consensus 132 p~~~y~~sK~~~e~~l~~----~g~~~tivrpg~~~g~~~~~~~~~~~---~~~~~~~~~~~g~g~~~~~~i~~~Dva~~ 204 (346)
T 3i6i_A 132 PGLNMYREKRRVRQLVEE----SGIPFTYICCNSIASWPYYNNIHPSE---VLPPTDFFQIYGDGNVKAYFVAGTDIGKF 204 (346)
T ss_dssp THHHHHHHHHHHHHHHHH----TTCCBEEEECCEESSCCCSCC--------CCCCSSCEEEETTSCCCEEEECHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHH----cCCCEEEEEecccccccCcccccccc---ccCCCceEEEccCCCceEEecCHHHHHHH
Confidence 677999999999998864 69999999999999976432111100 000111112233333 2679999999999
Q ss_pred HHHhhcCCCC-CCceEEe--cCCCCHHHHHHHHHHhCCC
Q 040253 238 HIFLFEHPNA-KGRYICS--SHPATILELAKFLREKYPE 273 (338)
Q Consensus 238 ~~~~l~~~~~-~~~~~~~--~~~~t~~e~~~~i~~~~~~ 273 (338)
++.++..+.. ++.|++. ++.+|+.|+++.+.+.+|.
T Consensus 205 ~~~~l~~~~~~~~~~~i~g~~~~~s~~e~~~~~~~~~g~ 243 (346)
T 3i6i_A 205 TMKTVDDVRTLNKSVHFRPSCNCLNINELASVWEKKIGR 243 (346)
T ss_dssp HHHHTTCGGGTTEEEECCCGGGEECHHHHHHHHHHHHTS
T ss_pred HHHHHhCccccCeEEEEeCCCCCCCHHHHHHHHHHHHCC
Confidence 9999998755 4567764 5789999999999999874
No 75
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=99.97 E-value=7e-31 Score=219.69 Aligned_cols=216 Identities=15% Similarity=0.203 Sum_probs=145.8
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEec
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHLA 85 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 85 (338)
|+|||||||||||++++++|+++|++|++++|+++....+. ++++++.+|++|.++ +++.++|+|||+|
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~---------~~~~~~~~D~~d~~~--~~~~~~d~vi~~a 69 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH---------KDINILQKDIFDLTL--SDLSDQNVVVDAY 69 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC---------SSSEEEECCGGGCCH--HHHTTCSEEEECC
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc---------CCCeEEeccccChhh--hhhcCCCEEEECC
Confidence 58999999999999999999999999999999876544321 478999999999887 7889999999999
Q ss_pred ccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHHH
Q 040253 86 TPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFV 165 (338)
Q Consensus 86 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~ 165 (338)
+... .....|+.++.++++++++.+ .+++|++||..+++... ...+..|+. +..|.+.|+.
T Consensus 70 g~~~--------~~~~~~~~~~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~-~~~~~~~~~---------~~~~~~~y~~ 130 (221)
T 3ew7_A 70 GISP--------DEAEKHVTSLDHLISVLNGTV-SPRLLVVGGAASLQIDE-DGNTLLESK---------GLREAPYYPT 130 (221)
T ss_dssp CSST--------TTTTSHHHHHHHHHHHHCSCC-SSEEEEECCCC-----------------------------CCCSCC
T ss_pred cCCc--------cccchHHHHHHHHHHHHHhcC-CceEEEEecceEEEcCC-CCccccccC---------CCCCHHHHHH
Confidence 9632 125679999999999999988 88999999988775222 122334443 3346678999
Q ss_pred HHHHHHHHHHHHHH-HcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcC
Q 040253 166 SKTLAEQAAWKFAE-ENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEH 244 (338)
Q Consensus 166 sK~~~E~~~~~~~~-~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~ 244 (338)
+|..+|.+ ..+.+ +.+++++++||+.+||++..... +. ..+...... +...++++++|+|++++.++++
T Consensus 131 ~k~~~e~~-~~~~~~~~gi~~~ivrp~~v~g~~~~~~~---~~-----~~~~~~~~~-~~~~~~i~~~Dva~~~~~~l~~ 200 (221)
T 3ew7_A 131 ARAQAKQL-EHLKSHQAEFSWTYISPSAMFEPGERTGD---YQ-----IGKDHLLFG-SDGNSFISMEDYAIAVLDEIER 200 (221)
T ss_dssp HHHHHHHH-HHHHTTTTTSCEEEEECSSCCCCC------------------------------CCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHH-HHHHhhccCccEEEEeCcceecCCCccCc---eE-----eccccceec-CCCCceEeHHHHHHHHHHHHhC
Confidence 99999986 33433 67999999999999998432111 00 001111111 1224699999999999999998
Q ss_pred CCC-CCceEEe-cCCCCHH
Q 040253 245 PNA-KGRYICS-SHPATIL 261 (338)
Q Consensus 245 ~~~-~~~~~~~-~~~~t~~ 261 (338)
+.. +++||++ +.+.+..
T Consensus 201 ~~~~g~~~~~~~~~~~~~~ 219 (221)
T 3ew7_A 201 PNHLNEHFTVAGKLEHHHH 219 (221)
T ss_dssp CSCTTSEEECCC-------
T ss_pred ccccCCEEEECCCCccccc
Confidence 776 5588874 4555544
No 76
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=99.97 E-value=5.7e-32 Score=225.42 Aligned_cols=206 Identities=20% Similarity=0.114 Sum_probs=159.5
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCc
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGC 78 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 78 (338)
|+.++|+|+||||+|+||++++++|+++|+ +|++++|++... .++++++.+|++|++++.+++ +
T Consensus 1 M~~~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~------------~~~~~~~~~D~~~~~~~~~~~--~ 66 (215)
T 2a35_A 1 MHSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------------HPRLDNPVGPLAELLPQLDGS--I 66 (215)
T ss_dssp ---CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------------CTTEECCBSCHHHHGGGCCSC--C
T ss_pred CCCCCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc------------CCCceEEeccccCHHHHHHhh--h
Confidence 666678999999999999999999999998 999999987641 157899999999999888888 9
Q ss_pred cEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccC
Q 040253 79 TGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKM 158 (338)
Q Consensus 79 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~ 158 (338)
|+|||+|+..... ....+.+++.|+.++.++++++++.+ +++||++||.++|+ .
T Consensus 67 d~vi~~a~~~~~~-~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~v~~Ss~~~~~------------------------~ 120 (215)
T 2a35_A 67 DTAFCCLGTTIKE-AGSEEAFRAVDFDLPLAVGKRALEMG-ARHYLVVSALGADA------------------------K 120 (215)
T ss_dssp SEEEECCCCCHHH-HSSHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT------------------------T
T ss_pred cEEEECeeecccc-CCCHHHHHHhhHHHHHHHHHHHHHcC-CCEEEEECCcccCC------------------------C
Confidence 9999999864321 13345788999999999999999988 88999999998884 1
Q ss_pred CCchHHHHHHHHHHHHHHHHHHcCcc-EEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHH
Q 040253 159 TGWMYFVSKTLAEQAAWKFAEENNID-FISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSA 237 (338)
Q Consensus 159 p~~~Y~~sK~~~E~~~~~~~~~~~~~-~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~ 237 (338)
|.+.|+.+|..+|.+++. .+++ ++++||+.+||+.....+ ... .. +....+.. +.++++|++|+|++
T Consensus 121 ~~~~y~~sK~~~e~~~~~----~~~~~~~~vrp~~v~g~~~~~~~---~~~-~~---~~~~~~~~-~~~~~i~~~Dva~~ 188 (215)
T 2a35_A 121 SSIFYNRVKGELEQALQE----QGWPQLTIARPSLLFGPREEFRL---AEI-LA---APIARILP-GKYHGIEACDLARA 188 (215)
T ss_dssp CSSHHHHHHHHHHHHHTT----SCCSEEEEEECCSEESTTSCEEG---GGG-TT---CCCC-----CHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHH----cCCCeEEEEeCceeeCCCCcchH---HHH-HH---HhhhhccC-CCcCcEeHHHHHHH
Confidence 345899999999998864 5899 999999999999754211 111 11 11111221 23679999999999
Q ss_pred HHHhhcCCCCCCceEEec-CCCC
Q 040253 238 HIFLFEHPNAKGRYICSS-HPAT 259 (338)
Q Consensus 238 ~~~~l~~~~~~~~~~~~~-~~~t 259 (338)
++.+++++. +++||+++ +.++
T Consensus 189 ~~~~~~~~~-~~~~~i~~~~~~~ 210 (215)
T 2a35_A 189 LWRLALEEG-KGVRFVESDELRK 210 (215)
T ss_dssp HHHHHTCCC-SEEEEEEHHHHHH
T ss_pred HHHHHhcCC-CCceEEcHHHHHH
Confidence 999999875 77898854 4433
No 77
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=99.97 E-value=6.4e-31 Score=224.44 Aligned_cols=230 Identities=18% Similarity=0.174 Sum_probs=171.1
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHC--CCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLER--GYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
+++|+||||||+|+||++++++|+++ |++|++++|++..... + ..+++++.+|++|.+++.++++++|+
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~---~------~~~~~~~~~D~~d~~~~~~~~~~~d~ 72 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK---I------GGEADVFIGDITDADSINPAFQGIDA 72 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH---T------TCCTTEEECCTTSHHHHHHHHTTCSE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh---c------CCCeeEEEecCCCHHHHHHHHcCCCE
Confidence 45789999999999999999999999 8999999997543322 1 14678899999999999999999999
Q ss_pred EEEecccCCCCC--------CCcc------chhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 81 VFHLATPMDFES--------KDPE------NEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 81 vi~~a~~~~~~~--------~~~~------~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
|||+|+...... ..+. ...++.|+.++.++++++++.+ +++||++||.+++. +..
T Consensus 73 vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~SS~~~~~----------~~~ 141 (253)
T 1xq6_A 73 LVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAG-VKHIVVVGSMGGTN----------PDH 141 (253)
T ss_dssp EEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHT-CSEEEEEEETTTTC----------TTC
T ss_pred EEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcC-CCEEEEEcCccCCC----------CCC
Confidence 999998643110 0111 1357899999999999999888 88999999987652 111
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQG 226 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (338)
+. .....+.|+.+|..+|.+++ +.|++++++||+.+||+..... ..+ .+....+. ....
T Consensus 142 ~~-------~~~~~~~y~~sK~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~--~~~-------~~~~~~~~-~~~~ 200 (253)
T 1xq6_A 142 PL-------NKLGNGNILVWKRKAEQYLA----DSGTPYTIIRAGGLLDKEGGVR--ELL-------VGKDDELL-QTDT 200 (253)
T ss_dssp GG-------GGGGGCCHHHHHHHHHHHHH----TSSSCEEEEEECEEECSCSSSS--CEE-------EESTTGGG-GSSC
T ss_pred cc-------ccccchhHHHHHHHHHHHHH----hCCCceEEEecceeecCCcchh--hhh-------ccCCcCCc-CCCC
Confidence 00 00112358889999999875 3799999999999999874321 000 01111111 1235
Q ss_pred ccccHHHHHHHHHHhhcCCCC-CCceEEec----CCCCHHHHHHHHHHhCCC
Q 040253 227 QFVHLDDLCSAHIFLFEHPNA-KGRYICSS----HPATILELAKFLREKYPE 273 (338)
Q Consensus 227 ~~i~v~D~a~~~~~~l~~~~~-~~~~~~~~----~~~t~~e~~~~i~~~~~~ 273 (338)
++++++|+|++++.+++++.. +++||+++ .++|+.|+++.+.+.+|+
T Consensus 201 ~~~~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 201 KTVPRADVAEVCIQALLFEEAKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp CEEEHHHHHHHHHHHTTCGGGTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred cEEcHHHHHHHHHHHHcCccccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 799999999999999988654 45788854 359999999999998774
No 78
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=99.97 E-value=7.7e-31 Score=228.58 Aligned_cols=214 Identities=16% Similarity=0.241 Sum_probs=160.2
Q ss_pred cEEEEeCCchhhHHHHHHHHHHC-CCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 6 ETVCVTGASGFIGSWLIMRLLER-GYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
|+|||||||||||++++++|++. |++|++++|+++....+. ..+++++.+|++|++++.++++++|+|||+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~--------~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~ 72 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW--------RGKVSVRQLDYFNQESMVEAFKGMDTVVFI 72 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG--------BTTBEEEECCTTCHHHHHHHTTTCSEEEEC
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh--------hCCCEEEEcCCCCHHHHHHHHhCCCEEEEe
Confidence 57999999999999999999998 899999999876533221 157899999999999999999999999999
Q ss_pred cccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHH
Q 040253 85 ATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYF 164 (338)
Q Consensus 85 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~ 164 (338)
|+... ....|+.++.++++++++.+ +++|||+||.+.. +.. |. .+.
T Consensus 73 a~~~~---------~~~~~~~~~~~l~~aa~~~g-v~~iv~~Ss~~~~-----------~~~------------~~-~~~ 118 (289)
T 3e48_A 73 PSIIH---------PSFKRIPEVENLVYAAKQSG-VAHIIFIGYYADQ-----------HNN------------PF-HMS 118 (289)
T ss_dssp CCCCC---------SHHHHHHHHHHHHHHHHHTT-CCEEEEEEESCCS-----------TTC------------CS-TTH
T ss_pred CCCCc---------cchhhHHHHHHHHHHHHHcC-CCEEEEEcccCCC-----------CCC------------CC-ccc
Confidence 98532 12458899999999999999 8999999984311 011 10 111
Q ss_pred HHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC-CCccccHHHHHHHHHHhhc
Q 040253 165 VSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK-QGQFVHLDDLCSAHIFLFE 243 (338)
Q Consensus 165 ~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~v~D~a~~~~~~l~ 243 (338)
..+..+|..+ ++.|++++++||+.++|+.. ..+.... .+....++.+. .+++++++|+|++++.++.
T Consensus 119 ~~~~~~e~~~----~~~g~~~~ilrp~~~~~~~~-----~~~~~~~---~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~ 186 (289)
T 3e48_A 119 PYFGYASRLL----STSGIDYTYVRMAMYMDPLK-----PYLPELM---NMHKLIYPAGDGRINYITRNDIARGVIAIIK 186 (289)
T ss_dssp HHHHHHHHHH----HHHCCEEEEEEECEESTTHH-----HHHHHHH---HHTEECCCCTTCEEEEECHHHHHHHHHHHHH
T ss_pred hhHHHHHHHH----HHcCCCEEEEeccccccccH-----HHHHHHH---HCCCEecCCCCceeeeEEHHHHHHHHHHHHc
Confidence 2222344443 45699999999999999742 1111111 12222233333 2679999999999999999
Q ss_pred CCCC-CCceEEecCCCCHHHHHHHHHHhCCC
Q 040253 244 HPNA-KGRYICSSHPATILELAKFLREKYPE 273 (338)
Q Consensus 244 ~~~~-~~~~~~~~~~~t~~e~~~~i~~~~~~ 273 (338)
.+.. +++|+++++.+|+.|+++.+.+.+|.
T Consensus 187 ~~~~~g~~~~~~~~~~s~~e~~~~~~~~~g~ 217 (289)
T 3e48_A 187 NPDTWGKRYLLSGYSYDMKELAAILSEASGT 217 (289)
T ss_dssp CGGGTTCEEEECCEEEEHHHHHHHHHHHHTS
T ss_pred CCCcCCceEEeCCCcCCHHHHHHHHHHHHCC
Confidence 8765 56898888889999999999999875
No 79
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=99.97 E-value=7.6e-30 Score=223.39 Aligned_cols=225 Identities=16% Similarity=0.159 Sum_probs=171.8
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC-CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG-YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
+|+|+||||||+||++++++|+++| ++|++++|++..... ..+.. .+++++.+|++|++++.++++++|+|||
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~-~~l~~-----~~~~~~~~D~~d~~~l~~~~~~~d~vi~ 78 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA-KELRL-----QGAEVVQGDQDDQVIMELALNGAYATFI 78 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH-HHHHH-----TTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH-HHHHH-----CCCEEEEecCCCHHHHHHHHhcCCEEEE
Confidence 5899999999999999999999998 999999998765421 11111 4789999999999999999999999999
Q ss_pred ecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchH
Q 040253 84 LATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 163 (338)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y 163 (338)
+++.... .....|+.++.++++++++.+ +++||++|+..+++.. +. .+...|
T Consensus 79 ~a~~~~~-------~~~~~~~~~~~~~~~aa~~~g-v~~iv~~S~~~~~~~~--------~~------------~~~~~y 130 (299)
T 2wm3_A 79 VTNYWES-------CSQEQEVKQGKLLADLARRLG-LHYVVYSGLENIKKLT--------AG------------RLAAAH 130 (299)
T ss_dssp CCCHHHH-------TCHHHHHHHHHHHHHHHHHHT-CSEEEECCCCCHHHHT--------TT------------SCCCHH
T ss_pred eCCCCcc-------ccchHHHHHHHHHHHHHHHcC-CCEEEEEcCccccccC--------CC------------cccCch
Confidence 9974221 124567889999999999988 8999998887777411 11 134589
Q ss_pred HHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCC--CCCCCC-CCCccccHHHHHHHHHH
Q 040253 164 FVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNE--AHYPII-KQGQFVHLDDLCSAHIF 240 (338)
Q Consensus 164 ~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~i~v~D~a~~~~~ 240 (338)
+.+|..+|.+++. .|++++++||+.+||+........ ....+.. ..++.+ ..+++++++|+|+++..
T Consensus 131 ~~sK~~~e~~~~~----~gi~~~ilrp~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~ 200 (299)
T 2wm3_A 131 FDGKGEVEEYFRD----IGVPMTSVRLPCYFENLLSHFLPQ------KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLS 200 (299)
T ss_dssp HHHHHHHHHHHHH----HTCCEEEEECCEEGGGGGTTTCCE------ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHH
T ss_pred hhHHHHHHHHHHH----CCCCEEEEeecHHhhhchhhcCCc------ccCCCCEEEEEecCCCCccceecHHHHHHHHHH
Confidence 9999999998864 599999999999999753211110 0011211 112222 23679999999999999
Q ss_pred hhcCCC--CCCceEEecCCCCHHHHHHHHHHhCCC
Q 040253 241 LFEHPN--AKGRYICSSHPATILELAKFLREKYPE 273 (338)
Q Consensus 241 ~l~~~~--~~~~~~~~~~~~t~~e~~~~i~~~~~~ 273 (338)
++..+. .++.|+++++.+|+.|+++.+.+.+|.
T Consensus 201 ~l~~~~~~~g~~~~~~g~~~s~~e~~~~~~~~~g~ 235 (299)
T 2wm3_A 201 LLKMPEKYVGQNIGLSTCRHTAEEYAALLTKHTRK 235 (299)
T ss_dssp HHHSHHHHTTCEEECCSEEECHHHHHHHHHHHHSS
T ss_pred HHcChhhhCCeEEEeeeccCCHHHHHHHHHHHHCC
Confidence 998742 356888877789999999999998874
No 80
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=99.96 E-value=1.7e-29 Score=225.73 Aligned_cols=228 Identities=16% Similarity=0.118 Sum_probs=167.8
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecc-cCCCCCchhhhCCcc
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKAD-LAEEGNFDEPIRGCT 79 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D-l~d~~~~~~~~~~~d 79 (338)
|++.+|+|+|||||||||++++++|+++|++|++++|+++.... +.+... ++++++.+| ++|++++.++++++|
T Consensus 1 M~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~-~~l~~~----~~v~~v~~D~l~d~~~l~~~~~~~d 75 (352)
T 1xgk_A 1 MAQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA-EELQAI----PNVTLFQGPLLNNVPLMDTLFEGAH 75 (352)
T ss_dssp --CCCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH-HHHHTS----TTEEEEESCCTTCHHHHHHHHTTCS
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH-HHHhhc----CCcEEEECCccCCHHHHHHHHhcCC
Confidence 65546899999999999999999999999999999998776421 122111 478999999 999999999999999
Q ss_pred EEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCce--eeeccCCCCCCcCCCCCCchhhhhhcc
Q 040253 80 GVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAG--TLDVEEHRKPVYDETSWSDLDFVRSVK 157 (338)
Q Consensus 80 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~--v~~~~~~~~~~~~e~~~~~~~~~~~~~ 157 (338)
+|||+++... ...|..+ .++++++++.+++++|||+||.+ .|+ .
T Consensus 76 ~Vi~~a~~~~----------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~--~--------------------- 121 (352)
T 1xgk_A 76 LAFINTTSQA----------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYG--P--------------------- 121 (352)
T ss_dssp EEEECCCSTT----------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTS--S---------------------
T ss_pred EEEEcCCCCC----------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccC--C---------------------
Confidence 9999987421 1346666 99999998875468999999975 221 0
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCC--CCC-CCCCCccccH-HH
Q 040253 158 MTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEA--HYP-IIKQGQFVHL-DD 233 (338)
Q Consensus 158 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~i~v-~D 233 (338)
.+.+.|+.+|..+|.+++. .+++++++||+ +||++........+.. .....+... .+. ....++++|+ +|
T Consensus 122 ~~~~~y~~sK~~~E~~~~~----~gi~~~ivrpg-~~g~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~i~v~~D 195 (352)
T 1xgk_A 122 WPAVPMWAPKFTVENYVRQ----LGLPSTFVYAG-IYNNNFTSLPYPLFQM-ELMPDGTFEWHAPFDPDIPLPWLDAEHD 195 (352)
T ss_dssp CCCCTTTHHHHHHHHHHHT----SSSCEEEEEEC-EEGGGCBSSSCSSCBE-EECTTSCEEEEESSCTTSCEEEECHHHH
T ss_pred CCCccHHHHHHHHHHHHHH----cCCCEEEEecc-eecCCchhcccccccc-cccCCCceEEeeccCCCCceeeEecHHH
Confidence 1335799999999999864 59999999986 6888654322111110 000112211 122 2233689999 99
Q ss_pred HHHHHHHhhcCCC---CCCceEEecCCCCHHHHHHHHHHhCCC
Q 040253 234 LCSAHIFLFEHPN---AKGRYICSSHPATILELAKFLREKYPE 273 (338)
Q Consensus 234 ~a~~~~~~l~~~~---~~~~~~~~~~~~t~~e~~~~i~~~~~~ 273 (338)
+|++++.+++++. .+++|+++++.+|+.|+++.+.+.+|.
T Consensus 196 va~ai~~~l~~~~~~~~g~~~~l~~~~~s~~e~~~~i~~~~G~ 238 (352)
T 1xgk_A 196 VGPALLQIFKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNR 238 (352)
T ss_dssp HHHHHHHHHHHCHHHHTTCEEEECSEEECHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHhCCchhhCCeEEEEecCCCCHHHHHHHHHHHHCC
Confidence 9999999998752 467899988889999999999998874
No 81
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=99.96 E-value=2.5e-29 Score=213.34 Aligned_cols=207 Identities=14% Similarity=0.125 Sum_probs=158.4
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
+|+|+||||+|+||++++++|+++|+ +|++++|+++...... .+++.++.+|++|++++.++++++|+||
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~--------~~~~~~~~~D~~d~~~~~~~~~~~d~vi 89 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA--------YKNVNQEVVDFEKLDDYASAFQGHDVGF 89 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG--------GGGCEEEECCGGGGGGGGGGGSSCSEEE
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc--------cCCceEEecCcCCHHHHHHHhcCCCEEE
Confidence 57999999999999999999999999 9999999876432211 1467899999999999999999999999
Q ss_pred EecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCch
Q 040253 83 HLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWM 162 (338)
Q Consensus 83 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~ 162 (338)
|+|+..... ...+..+++|+.++.++++++++.+ .++||++||.++|+ . +.+.
T Consensus 90 ~~ag~~~~~--~~~~~~~~~n~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~--~----------------------~~~~ 142 (242)
T 2bka_A 90 CCLGTTRGK--AGAEGFVRVDRDYVLKSAELAKAGG-CKHFNLLSSKGADK--S----------------------SNFL 142 (242)
T ss_dssp ECCCCCHHH--HHHHHHHHHHTHHHHHHHHHHHHTT-CCEEEEECCTTCCT--T----------------------CSSH
T ss_pred ECCCccccc--CCcccceeeeHHHHHHHHHHHHHCC-CCEEEEEccCcCCC--C----------------------Ccch
Confidence 999864311 1234678999999999999999888 88999999998874 1 2348
Q ss_pred HHHHHHHHHHHHHHHHHHcCc-cEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHh
Q 040253 163 YFVSKTLAEQAAWKFAEENNI-DFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFL 241 (338)
Q Consensus 163 Y~~sK~~~E~~~~~~~~~~~~-~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 241 (338)
|+.+|..+|.+++. .++ +++++||+.++|+...... .........+.... .....++++++|+|++++.+
T Consensus 143 Y~~sK~~~e~~~~~----~~~~~~~~vrpg~v~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~dva~~~~~~ 213 (242)
T 2bka_A 143 YLQVKGEVEAKVEE----LKFDRYSVFRPGVLLCDRQESRP---GEWLVRKFFGSLPD--SWASGHSVPVVTVVRAMLNN 213 (242)
T ss_dssp HHHHHHHHHHHHHT----TCCSEEEEEECCEEECTTGGGSH---HHHHHHHHHCSCCT--TGGGGTEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh----cCCCCeEEEcCceecCCCCCCcH---HHHHHHHhhcccCc--cccCCcccCHHHHHHHHHHH
Confidence 99999999998854 578 5999999999999743211 11111111111111 11124699999999999999
Q ss_pred hcCCCCCCceEEec
Q 040253 242 FEHPNAKGRYICSS 255 (338)
Q Consensus 242 l~~~~~~~~~~~~~ 255 (338)
+.++...+.+++++
T Consensus 214 ~~~~~~~~~~~~~~ 227 (242)
T 2bka_A 214 VVRPRDKQMELLEN 227 (242)
T ss_dssp HTSCCCSSEEEEEH
T ss_pred HhCccccCeeEeeH
Confidence 99887777777643
No 82
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=99.96 E-value=1.5e-28 Score=203.19 Aligned_cols=200 Identities=15% Similarity=0.124 Sum_probs=152.5
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEec
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHLA 85 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 85 (338)
|+|+||||+|+||++++++|+++|++|++++|+++..... ...+++++.+|++|++++.++++++|+|||+|
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a 75 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE--------GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLL 75 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS--------SCCCSEEEESCTTSHHHHHHHHTTCSEEEECC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc--------cCCceEEEEecCCCHHHHHHHHcCCCEEEECc
Confidence 7999999999999999999999999999999986542210 02578999999999999999999999999999
Q ss_pred ccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHHH
Q 040253 86 TPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFV 165 (338)
Q Consensus 86 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~ 165 (338)
+.... . ...+.|+.++.++++++++.+ +++||++||.++|+.. ... + .+...|+.
T Consensus 76 ~~~~~--~----~~~~~n~~~~~~~~~~~~~~~-~~~~v~~Ss~~~~~~~--~~~---------------~-~~~~~y~~ 130 (206)
T 1hdo_A 76 GTRND--L----SPTTVMSEGARNIVAAMKAHG-VDKVVACTSAFLLWDP--TKV---------------P-PRLQAVTD 130 (206)
T ss_dssp CCTTC--C----SCCCHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCT--TCS---------------C-GGGHHHHH
T ss_pred cCCCC--C----CccchHHHHHHHHHHHHHHhC-CCeEEEEeeeeeccCc--ccc---------------c-ccchhHHH
Confidence 86543 1 123589999999999999888 8899999999888621 110 0 14568999
Q ss_pred HHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCC
Q 040253 166 SKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHP 245 (338)
Q Consensus 166 sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 245 (338)
+|..+|.+++ +.+++++++||+.++ ++...... . ... .. .+ . .++++++|+|++++.+++++
T Consensus 131 ~K~~~e~~~~----~~~i~~~~lrp~~~~-~~~~~~~~---~---~~~-~~---~~--~-~~~i~~~Dva~~~~~~~~~~ 192 (206)
T 1hdo_A 131 DHIRMHKVLR----ESGLKYVAVMPPHIG-DQPLTGAY---T---VTL-DG---RG--P-SRVISKHDLGHFMLRCLTTD 192 (206)
T ss_dssp HHHHHHHHHH----HTCSEEEEECCSEEE-CCCCCSCC---E---EES-SS---CS--S-CSEEEHHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHH----hCCCCEEEEeCCccc-CCCCCcce---E---ecc-cC---CC--C-CCccCHHHHHHHHHHHhcCc
Confidence 9999999884 469999999999983 33211100 0 000 10 00 0 48999999999999999986
Q ss_pred CC-CCceEEecC
Q 040253 246 NA-KGRYICSSH 256 (338)
Q Consensus 246 ~~-~~~~~~~~~ 256 (338)
.. ++.|+++++
T Consensus 193 ~~~g~~~~i~~g 204 (206)
T 1hdo_A 193 EYDGHSTYPSHQ 204 (206)
T ss_dssp TTTTCEEEEECC
T ss_pred cccccceeeecc
Confidence 54 457887653
No 83
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=99.96 E-value=6.9e-29 Score=215.33 Aligned_cols=239 Identities=14% Similarity=0.062 Sum_probs=170.0
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
|+.++|+||||||+|+||++++++|+++|++|++++|+.+......... ..+++++.+|++|.+++.++++
T Consensus 1 M~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~~~~~~~~~~~ 75 (281)
T 3m1a_A 1 MSESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY-----PDRAEAISLDVTDGERIDVVAADVLA 75 (281)
T ss_dssp ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC-----TTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc-----cCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 7777899999999999999999999999999999999877655543322 1478999999999998887765
Q ss_pred ---CccEEEEecccCCC-----CCCCccchhhhhhhHH----HHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCC
Q 040253 77 ---GCTGVFHLATPMDF-----ESKDPENEVIRPTING----MVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDE 144 (338)
Q Consensus 77 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e 144 (338)
++|+|||+||.... ...+..+..+++|+.+ +..++..+++.+ ..++|++||...+.
T Consensus 76 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~----------- 143 (281)
T 3m1a_A 76 RYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQL----------- 143 (281)
T ss_dssp HHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC-----------
T ss_pred hCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccC-----------
Confidence 78999999986431 1122334678999999 455555556666 68999999987653
Q ss_pred CCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCC-------CChhHHHhhhhcc
Q 040253 145 TSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSS-------MPPSLITALSPIT 214 (338)
Q Consensus 145 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~ 214 (338)
+..+.+.|+.+|.+.|.+++.++.+ +|+++++++||.+.++..... ..........
T Consensus 144 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--- 209 (281)
T 3m1a_A 144 -----------SFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGP--- 209 (281)
T ss_dssp -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHH---
T ss_pred -----------CCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHH---
Confidence 1235669999999999999999988 699999999999988754321 1111111000
Q ss_pred cCCCCCCCCCCCccccHHHHHHHHHHhhcCCCCCCceEEec-CCCCHHHHHHHHHHhC
Q 040253 215 RNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPNAKGRYICSS-HPATILELAKFLREKY 271 (338)
Q Consensus 215 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~-~~~t~~e~~~~i~~~~ 271 (338)
... ........++.+++|+|++++.+++.+..++.|++++ ....+.+....+.+.+
T Consensus 210 ~~~-~~~~~~~~~~~~~~dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~ 266 (281)
T 3m1a_A 210 TRQ-LVQGSDGSQPGDPAKAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAEL 266 (281)
T ss_dssp HHH-HHHC-----CBCHHHHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHH
T ss_pred HHH-HHhhccCCCCCCHHHHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHH
Confidence 000 0001112568899999999999999988788888754 4456666666665543
No 84
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=99.95 E-value=2.4e-27 Score=205.34 Aligned_cols=235 Identities=16% Similarity=0.208 Sum_probs=171.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+............. ..++.++.+|++|.+++.++++
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 91 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS---PDVISFVHCDVTKDEDVRNLVDTTIAKHG 91 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC---TTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC---CCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 458999999999999999999999999999999976544333222211 1378999999999998888775
Q ss_pred CccEEEEecccCCCC-------CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCC
Q 040253 77 GCTGVFHLATPMDFE-------SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++... + .+++|++||..++....
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~--------- 161 (278)
T 2bgk_A 92 KLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGE--------- 161 (278)
T ss_dssp CCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCT---------
T ss_pred CCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCCC---------
Confidence 799999999864311 11233467899999999999887653 4 57999999988774110
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCC--hhHHHhhhhcccCCCCC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMP--PSLITALSPITRNEAHY 220 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~ 220 (338)
.+...|+.+|.+.|.+++.++.+ +|++++++|||.++++....... ........ ...+..
T Consensus 162 ------------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~--~~~~~~- 226 (278)
T 2bgk_A 162 ------------GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELA--HQAANL- 226 (278)
T ss_dssp ------------TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHH--HHTCSS-
T ss_pred ------------CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhh--hccccc-
Confidence 13458999999999999999876 48999999999999986543221 11111111 111111
Q ss_pred CCCCCCccccHHHHHHHHHHhhcCCC---CCCceEE-ecCCCCHHHHHHHHHHh
Q 040253 221 PIIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYIC-SSHPATILELAKFLREK 270 (338)
Q Consensus 221 ~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~-~~~~~t~~e~~~~i~~~ 270 (338)
..++++++|+|++++.++.... .+..|++ ++..+++.|+++.+.+.
T Consensus 227 ----~~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 227 ----KGTLLRAEDVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHG 276 (278)
T ss_dssp ----CSCCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSC
T ss_pred ----ccccCCHHHHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhh
Confidence 1468999999999999996532 2446777 45679999999887654
No 85
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=99.95 E-value=9.8e-28 Score=211.27 Aligned_cols=235 Identities=16% Similarity=0.184 Sum_probs=163.5
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc--HHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCc
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN--KKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGC 78 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 78 (338)
|+. +|+|+|||||||||++++++|+++|++|++++|+... ..+.+.+..+. ..+++++.+|++|++++.++++++
T Consensus 1 M~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~--~~~~~~~~~D~~d~~~l~~~~~~~ 77 (313)
T 1qyd_A 1 MDK-KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFK--QLGAKLIEASLDDHQRLVDALKQV 77 (313)
T ss_dssp -CC-CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHH--TTTCEEECCCSSCHHHHHHHHTTC
T ss_pred CCC-CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHH--hCCeEEEeCCCCCHHHHHHHHhCC
Confidence 543 6789999999999999999999999999999998643 12221111100 157899999999999999999999
Q ss_pred cEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccC
Q 040253 79 TGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKM 158 (338)
Q Consensus 79 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~ 158 (338)
|+|||+++.... ..|+.++.+++++|++.+++++||+ | +|+... ... .. +..
T Consensus 78 d~vi~~a~~~~~----------~~~~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~--~~~---~~---------~~~ 129 (313)
T 1qyd_A 78 DVVISALAGGVL----------SHHILEQLKLVEAIKEAGNIKRFLP-S---EFGMDP--DIM---EH---------ALQ 129 (313)
T ss_dssp SEEEECCCCSSS----------STTTTTHHHHHHHHHHSCCCSEEEC-S---CCSSCT--TSC---CC---------CCS
T ss_pred CEEEECCccccc----------hhhHHHHHHHHHHHHhcCCCceEEe-c---CCcCCc--ccc---cc---------CCC
Confidence 999999986432 1256778999999998865789985 3 454211 111 11 112
Q ss_pred C-CchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCC-CccccHHHHHH
Q 040253 159 T-GWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQ-GQFVHLDDLCS 236 (338)
Q Consensus 159 p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~D~a~ 236 (338)
| ...| .+|..+|++++ +.|++++++||+.++|+..... ..... ......+....++.+.. +++++++|+|+
T Consensus 130 p~~~~y-~sK~~~e~~~~----~~g~~~~ilrp~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~g~~~~~~i~~~Dva~ 202 (313)
T 1qyd_A 130 PGSITF-IDKRKVRRAIE----AASIPYTYVSSNMFAGYFAGSL-AQLDG-HMMPPRDKVLIYGDGNVKGIWVDEDDVGT 202 (313)
T ss_dssp STTHHH-HHHHHHHHHHH----HTTCCBCEEECCEEHHHHTTTS-SCTTC-CSSCCSSEECCBTTSCSEEEEECHHHHHH
T ss_pred CCcchH-HHHHHHHHHHH----hcCCCeEEEEeceecccccccc-ccccc-cccCCCCeEEEeCCCCceEEEEEHHHHHH
Confidence 3 4578 99999999885 4699999999999988542211 10000 00000111122333322 68999999999
Q ss_pred HHHHhhcCCCC-CCceEE-ec-CCCCHHHHHHHHHHhCCC
Q 040253 237 AHIFLFEHPNA-KGRYIC-SS-HPATILELAKFLREKYPE 273 (338)
Q Consensus 237 ~~~~~l~~~~~-~~~~~~-~~-~~~t~~e~~~~i~~~~~~ 273 (338)
+++.+++++.. ++.|++ ++ +.+|+.|+++.+.+.+|.
T Consensus 203 ~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~ 242 (313)
T 1qyd_A 203 YTIKSIDDPQTLNKTMYIRPPMNILSQKEVIQIWERLSEQ 242 (313)
T ss_dssp HHHHHTTCGGGSSSEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred HHHHHHhCcccCCceEEEeCCCCccCHHHHHHHHHHhcCC
Confidence 99999987654 455655 44 689999999999999874
No 86
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=99.94 E-value=1.8e-26 Score=194.89 Aligned_cols=200 Identities=17% Similarity=0.210 Sum_probs=137.6
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCC-CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEE
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERG-YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGV 81 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 81 (338)
++||+||||||+|+||++++++|+++| ++|++++|+++....+ ...+++++.+|++|++++.++++++|+|
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~--------~~~~~~~~~~Dl~d~~~~~~~~~~~D~v 92 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP--------YPTNSQIIMGDVLNHAALKQAMQGQDIV 92 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS--------CCTTEEEEECCTTCHHHHHHHHTTCSEE
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc--------ccCCcEEEEecCCCHHHHHHHhcCCCEE
Confidence 357899999999999999999999999 8999999986543211 1157899999999999999999999999
Q ss_pred EEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCc
Q 040253 82 FHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGW 161 (338)
Q Consensus 82 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~ 161 (338)
||+++... . ...+.++++++++.+ +++||++||..+|+..........+.. ...+..
T Consensus 93 v~~a~~~~------~-------~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~---------~~~~~~ 149 (236)
T 3qvo_A 93 YANLTGED------L-------DIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAV---------IGEPLK 149 (236)
T ss_dssp EEECCSTT------H-------HHHHHHHHHHHHHTT-CCEEEEECCCCC-------------------------CGGGH
T ss_pred EEcCCCCc------h-------hHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhc---------ccchHH
Confidence 99998411 1 123678999999988 899999999999973222111222222 112223
Q ss_pred hHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHh
Q 040253 162 MYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFL 241 (338)
Q Consensus 162 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 241 (338)
.| ..+|+.+ ++.|+++++|||+.++++..... ... .....+ ..++++.+|+|++++.+
T Consensus 150 ~~----~~~~~~l----~~~gi~~~~vrPg~i~~~~~~~~---------~~~-~~~~~~----~~~~i~~~DvA~~i~~l 207 (236)
T 3qvo_A 150 PF----RRAADAI----EASGLEYTILRPAWLTDEDIIDY---------ELT-SRNEPF----KGTIVSRKSVAALITDI 207 (236)
T ss_dssp HH----HHHHHHH----HTSCSEEEEEEECEEECCSCCCC---------EEE-CTTSCC----SCSEEEHHHHHHHHHHH
T ss_pred HH----HHHHHHH----HHCCCCEEEEeCCcccCCCCcce---------EEe-ccCCCC----CCcEECHHHHHHHHHHH
Confidence 34 4445544 35799999999999998753210 000 111111 13589999999999999
Q ss_pred hcCCC--CCCceEEec
Q 040253 242 FEHPN--AKGRYICSS 255 (338)
Q Consensus 242 l~~~~--~~~~~~~~~ 255 (338)
+..+. .++.|++++
T Consensus 208 l~~~~~~~g~~~~i~~ 223 (236)
T 3qvo_A 208 IDKPEKHIGENIGINQ 223 (236)
T ss_dssp HHSTTTTTTEEEEEEC
T ss_pred HcCcccccCeeEEecC
Confidence 98876 355777754
No 87
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=99.94 E-value=1.3e-26 Score=198.17 Aligned_cols=223 Identities=13% Similarity=0.124 Sum_probs=161.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|++++.++++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 87 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQ--LGGQAFACRCDITSEQELSALADFAISKLG 87 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHH--hCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 458999999999999999999999999999999986554433221111 12478899999999998888775
Q ss_pred CccEEEEecccCCCC----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 77 GCTGVFHLATPMDFE----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++. +.+ .++||++||...+.
T Consensus 88 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--------------- 151 (255)
T 1fmc_A 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAEN--------------- 151 (255)
T ss_dssp SCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC---------------
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcC---------------
Confidence 899999999865421 112234678899999999888774 344 67999999987764
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQ 225 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (338)
+..+...|+.+|.+.|.+++.+++++ +++++++|||.++++.............. ..+. ..
T Consensus 152 -------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~--~~----- 215 (255)
T 1fmc_A 152 -------KNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKM--LQHT--PI----- 215 (255)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHH--HHTC--SS-----
T ss_pred -------CCCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHH--HhcC--Cc-----
Confidence 11245689999999999999988775 89999999999998753322222111111 1111 11
Q ss_pred CccccHHHHHHHHHHhhcCCC---CCCceEEe-cCCCCH
Q 040253 226 GQFVHLDDLCSAHIFLFEHPN---AKGRYICS-SHPATI 260 (338)
Q Consensus 226 ~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~-~~~~t~ 260 (338)
.++++++|+|+++..++.... .+..|+++ +...|+
T Consensus 216 ~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 216 RRLGQPQDIANAALFLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred ccCCCHHHHHHHHHHHhCCccccCCCcEEEECCceeccC
Confidence 458899999999999997543 24478885 455553
No 88
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=99.94 E-value=7.6e-28 Score=205.68 Aligned_cols=229 Identities=15% Similarity=0.113 Sum_probs=157.1
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----CccE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR----GCTG 80 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~d~ 80 (338)
||+||||||+|+||++++++|+++|++|++++|+++... . .+.+|++|.+++.++++ ++|+
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~---~~~~D~~~~~~~~~~~~~~~~~~d~ 65 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE------------A---DLSTPGGRETAVAAVLDRCGGVLDG 65 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE------------C---CTTSHHHHHHHHHHHHHHHTTCCSE
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc------------c---cccCCcccHHHHHHHHHHcCCCccE
Confidence 478999999999999999999999999999999865421 0 26789999888888775 8999
Q ss_pred EEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCC----CCCc-hh
Q 040253 81 VFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDET----SWSD-LD 151 (338)
Q Consensus 81 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~----~~~~-~~ 151 (338)
|||+||.... ..+.+..+++|+.++.++++++... + .+++|++||..+|+.... ..+..|. ++.. ..
T Consensus 66 vi~~Ag~~~~--~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 141 (255)
T 2dkn_A 66 LVCCAGVGVT--AANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAA-ELPMVEAMLAGDEARAIE 141 (255)
T ss_dssp EEECCCCCTT--SSCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGG-GCHHHHHHHHTCHHHHHH
T ss_pred EEECCCCCCc--chhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEecccccccccc-ccchhhhhcccchhhhhh
Confidence 9999996542 2345688999999999999977653 4 589999999998862211 1111110 0000 00
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhh-hhcccCCCCCCCCCCCc
Q 040253 152 FVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITAL-SPITRNEAHYPIIKQGQ 227 (338)
Q Consensus 152 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 227 (338)
..+....+.+.|+.+|.++|.+++.++++ +|++++++||+.++|+.... .+.... ..... .+.. ...+
T Consensus 142 ~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~----~~~~~~~~~~~~---~~~~-~~~~ 213 (255)
T 2dkn_A 142 LAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQA----SKADPRYGESTR---RFVA-PLGR 213 (255)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHH----HHHCTTTHHHHH---SCCC-TTSS
T ss_pred hccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhh----cccchhhHHHHH---HHHH-HhcC
Confidence 00011235678999999999999998877 59999999999999875211 000000 00000 0101 2257
Q ss_pred cccHHHHHHHHHHhhcCCC---CCCceEEec-CCCCH
Q 040253 228 FVHLDDLCSAHIFLFEHPN---AKGRYICSS-HPATI 260 (338)
Q Consensus 228 ~i~v~D~a~~~~~~l~~~~---~~~~~~~~~-~~~t~ 260 (338)
+++++|+|++++.++..+. .+..|++++ ..+++
T Consensus 214 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~ 250 (255)
T 2dkn_A 214 GSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDALM 250 (255)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHHHH
T ss_pred CCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEeee
Confidence 9999999999999998652 244678754 34443
No 89
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=99.94 E-value=1.4e-26 Score=203.25 Aligned_cols=222 Identities=16% Similarity=0.202 Sum_probs=157.4
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCC-------CcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDP-------DNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-------~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (338)
||+|+||||||+||++++++|+++|++|++++|++ ++...+..+.. .+++++.+|++|++++.+++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~-----~~v~~v~~D~~d~~~l~~~~~~ 76 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQS-----LGVILLEGDINDHETLVKAIKQ 76 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHH-----TTCEEEECCTTCHHHHHHHHTT
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHh-----CCCEEEEeCCCCHHHHHHHHhC
Confidence 67899999999999999999999999999999986 22222222211 4789999999999999999999
Q ss_pred ccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhcc
Q 040253 78 CTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVK 157 (338)
Q Consensus 78 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~ 157 (338)
+|+|||+++... +.++.++++++++.+.+++||+ | +||... +|.. +.
T Consensus 77 ~d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~~------~~~~---------~~ 123 (307)
T 2gas_A 77 VDIVICAAGRLL--------------IEDQVKIIKAIKEAGNVKKFFP-S---EFGLDV------DRHD---------AV 123 (307)
T ss_dssp CSEEEECSSSSC--------------GGGHHHHHHHHHHHCCCSEEEC-S---CCSSCT------TSCC---------CC
T ss_pred CCEEEECCcccc--------------cccHHHHHHHHHhcCCceEEee-c---ccccCc------cccc---------CC
Confidence 999999998532 3456789999988764788883 3 354111 1221 11
Q ss_pred CC-CchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCC-CCCCCCCC-CccccHHHH
Q 040253 158 MT-GWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNE-AHYPIIKQ-GQFVHLDDL 234 (338)
Q Consensus 158 ~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~i~v~D~ 234 (338)
.| .+.| .+|..+|.+++ +.+++++++||+.++|+........ ......+.. ..++.+.. +++++++|+
T Consensus 124 ~p~~~~y-~sK~~~e~~~~----~~~i~~~~lrp~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~Dv 194 (307)
T 2gas_A 124 EPVRQVF-EEKASIRRVIE----AEGVPYTYLCCHAFTGYFLRNLAQL----DATDPPRDKVVILGDGNVKGAYVTEADV 194 (307)
T ss_dssp TTHHHHH-HHHHHHHHHHH----HHTCCBEEEECCEETTTTGGGTTCT----TCSSCCSSEEEEETTSCSEEEEECHHHH
T ss_pred CcchhHH-HHHHHHHHHHH----HcCCCeEEEEcceeecccccccccc----ccccCCCCeEEEecCCCcceEEeeHHHH
Confidence 23 3578 99999998885 3589999999999988642211000 000001111 12222322 679999999
Q ss_pred HHHHHHhhcCCCC-CCceEE-ec-CCCCHHHHHHHHHHhCCC
Q 040253 235 CSAHIFLFEHPNA-KGRYIC-SS-HPATILELAKFLREKYPE 273 (338)
Q Consensus 235 a~~~~~~l~~~~~-~~~~~~-~~-~~~t~~e~~~~i~~~~~~ 273 (338)
|++++.++..+.. ++.|++ ++ +.+|+.|+++.+.+.+|.
T Consensus 195 a~~~~~~l~~~~~~~~~~~~~~~~~~~s~~e~~~~~~~~~g~ 236 (307)
T 2gas_A 195 GTFTIRAANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGK 236 (307)
T ss_dssp HHHHHHHHTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHHcCccccCceEEEeCCCCcCCHHHHHHHHHHHhCC
Confidence 9999999987654 345554 44 689999999999999874
No 90
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=99.94 E-value=5.3e-27 Score=206.10 Aligned_cols=228 Identities=19% Similarity=0.269 Sum_probs=159.1
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcH---HHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNK---KKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG 77 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (338)
|+. ||+|+||||||+||++++++|++.|++|++++|+.... .+.+.+..+. ..+++++.+|++|++++.+++++
T Consensus 1 M~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~--~~~v~~v~~D~~d~~~l~~~~~~ 77 (308)
T 1qyc_A 1 MGS-RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFK--ASGANIVHGSIDDHASLVEAVKN 77 (308)
T ss_dssp -CC-CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHH--TTTCEEECCCTTCHHHHHHHHHT
T ss_pred CCC-CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHH--hCCCEEEEeccCCHHHHHHHHcC
Confidence 543 67899999999999999999999999999999976432 2221111110 15789999999999999999999
Q ss_pred ccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhcc
Q 040253 78 CTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVK 157 (338)
Q Consensus 78 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~ 157 (338)
+|+|||+++... +.++.+++++|++.+++++||+ | +||.. .+|.. +.
T Consensus 78 ~d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~------~~~~~---------~~ 124 (308)
T 1qyc_A 78 VDVVISTVGSLQ--------------IESQVNIIKAIKEVGTVKRFFP-S---EFGND------VDNVH---------AV 124 (308)
T ss_dssp CSEEEECCCGGG--------------SGGGHHHHHHHHHHCCCSEEEC-S---CCSSC------TTSCC---------CC
T ss_pred CCEEEECCcchh--------------hhhHHHHHHHHHhcCCCceEee-c---ccccC------ccccc---------cC
Confidence 999999998521 3346789999988765788984 4 35411 11222 11
Q ss_pred CC-CchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCC-CCCCCCC-CCccccHHHH
Q 040253 158 MT-GWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNE-AHYPIIK-QGQFVHLDDL 234 (338)
Q Consensus 158 ~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~v~D~ 234 (338)
.| ...| .+|..+|.+++. .+++++++||+.++|+......... .....+.. ..++.+. .+++++++|+
T Consensus 125 ~p~~~~y-~sK~~~e~~~~~----~~~~~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~Dv 195 (308)
T 1qyc_A 125 EPAKSVF-EVKAKVRRAIEA----EGIPYTYVSSNCFAGYFLRSLAQAG----LTAPPRDKVVILGDGNARVVFVKEEDI 195 (308)
T ss_dssp TTHHHHH-HHHHHHHHHHHH----HTCCBEEEECCEEHHHHTTTTTCTT----CSSCCSSEEEEETTSCCEEEEECHHHH
T ss_pred CcchhHH-HHHHHHHHHHHh----cCCCeEEEEeceecccccccccccc----ccCCCCCceEEecCCCceEEEecHHHH
Confidence 23 3478 999999988853 5899999999999886432111100 00001111 1222222 2689999999
Q ss_pred HHHHHHhhcCCCC-CCceEE-e-cCCCCHHHHHHHHHHhCCC
Q 040253 235 CSAHIFLFEHPNA-KGRYIC-S-SHPATILELAKFLREKYPE 273 (338)
Q Consensus 235 a~~~~~~l~~~~~-~~~~~~-~-~~~~t~~e~~~~i~~~~~~ 273 (338)
|++++.+++++.. ++.|++ + ++.+|+.|+++.+.+.+|.
T Consensus 196 a~~~~~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~ 237 (308)
T 1qyc_A 196 GTFTIKAVDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDK 237 (308)
T ss_dssp HHHHHTTSSCGGGTTEEEECCCGGGEEEHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhCccccCeEEEEeCCCCccCHHHHHHHHHHHhCC
Confidence 9999999987654 445665 4 3689999999999999984
No 91
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=99.94 E-value=2.7e-26 Score=189.86 Aligned_cols=194 Identities=13% Similarity=0.047 Sum_probs=151.5
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC---CccEEE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---GCTGVF 82 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~vi 82 (338)
|+|+||||+|+||++++++|+++ +|++++|+++......... .. +++.+|++|++++.++++ ++|+||
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~------~~-~~~~~D~~~~~~~~~~~~~~~~id~vi 71 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV------GA-RALPADLADELEAKALLEEAGPLDLLV 71 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH------TC-EECCCCTTSHHHHHHHHHHHCSEEEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc------cC-cEEEeeCCCHHHHHHHHHhcCCCCEEE
Confidence 58999999999999999999988 9999999765544433221 12 888999999999998887 899999
Q ss_pred EecccCCC-----CCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhcc
Q 040253 83 HLATPMDF-----ESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVK 157 (338)
Q Consensus 83 ~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~ 157 (338)
|+||.... ...+..+..+++|+.++.++++++++.+ .++||++||..++. +.
T Consensus 72 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~iv~~sS~~~~~----------------------~~ 128 (207)
T 2yut_A 72 HAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQK-GARAVFFGAYPRYV----------------------QV 128 (207)
T ss_dssp ECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEE-EEEEEEECCCHHHH----------------------SS
T ss_pred ECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcC-CcEEEEEcChhhcc----------------------CC
Confidence 99986532 1233445788999999999999996666 78999999988774 11
Q ss_pred CCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHH
Q 040253 158 MTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDL 234 (338)
Q Consensus 158 ~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~ 234 (338)
.+...|+.+|...|.+++.++.+ +|++++++||+.++++... +.... ..++++++|+
T Consensus 129 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~---------------~~~~~-----~~~~~~~~dv 188 (207)
T 2yut_A 129 PGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA---------------PLGGP-----PKGALSPEEA 188 (207)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG---------------GGTSC-----CTTCBCHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc---------------ccCCC-----CCCCCCHHHH
Confidence 25568999999999999999887 5999999999999987511 11111 1579999999
Q ss_pred HHHHHHhhcCCCCCCce
Q 040253 235 CSAHIFLFEHPNAKGRY 251 (338)
Q Consensus 235 a~~~~~~l~~~~~~~~~ 251 (338)
|++++.+++++..+.++
T Consensus 189 a~~~~~~~~~~~~~~~~ 205 (207)
T 2yut_A 189 ARKVLEGLFREPVPALL 205 (207)
T ss_dssp HHHHHHHHC--CCCSCC
T ss_pred HHHHHHHHhCCCCcccc
Confidence 99999999987655544
No 92
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=99.94 E-value=2.5e-26 Score=202.72 Aligned_cols=218 Identities=19% Similarity=0.202 Sum_probs=157.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCC-cHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPD-NKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
+++|+||||||+||++++++|++.|++|++++|+++ ....+..+.. .+++++.+|++|++++.++++++|+|||
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~-----~~v~~v~~Dl~d~~~l~~a~~~~d~vi~ 85 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS-----LGAIIVKGELDEHEKLVELMKKVDVVIS 85 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH-----TTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc-----CCCEEEEecCCCHHHHHHHHcCCCEEEE
Confidence 458999999999999999999999999999999875 3332222211 4789999999999999999999999999
Q ss_pred ecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCC-Cch
Q 040253 84 LATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMT-GWM 162 (338)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p-~~~ 162 (338)
+++... +.++.++++++++.+++++||+ | +||.. .+|.. +..| ...
T Consensus 86 ~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~------~~~~~---------~~~p~~~~ 132 (318)
T 2r6j_A 86 ALAFPQ--------------ILDQFKILEAIKVAGNIKRFLP-S---DFGVE------EDRIN---------ALPPFEAL 132 (318)
T ss_dssp CCCGGG--------------STTHHHHHHHHHHHCCCCEEEC-S---CCSSC------TTTCC---------CCHHHHHH
T ss_pred CCchhh--------------hHHHHHHHHHHHhcCCCCEEEe-e---ccccC------ccccc---------CCCCcchh
Confidence 998521 3446889999988764788884 3 35411 12222 1112 346
Q ss_pred HHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhh-cccCC-CCCCCCC-CCccccHHHHHHHHH
Q 040253 163 YFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSP-ITRNE-AHYPIIK-QGQFVHLDDLCSAHI 239 (338)
Q Consensus 163 Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~-~~~~i~v~D~a~~~~ 239 (338)
| .+|..+|.+++ +.+++++++||+.+++... ...... ..+.. ..++.+. .+++++++|++++++
T Consensus 133 y-~sK~~~e~~~~----~~~~~~~~lr~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~ 199 (318)
T 2r6j_A 133 I-ERKRMIRRAIE----EANIPYTYVSANCFASYFI--------NYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTI 199 (318)
T ss_dssp H-HHHHHHHHHHH----HTTCCBEEEECCEEHHHHH--------HHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHH
T ss_pred H-HHHHHHHHHHH----hcCCCeEEEEcceehhhhh--------hhhccccCCCCceEEecCCCceeeEeeHHHHHHHHH
Confidence 8 99999998885 4699999999998876421 111111 11111 1222232 267999999999999
Q ss_pred HhhcCCCC-CCceEE-e-cCCCCHHHHHHHHHHhCCC
Q 040253 240 FLFEHPNA-KGRYIC-S-SHPATILELAKFLREKYPE 273 (338)
Q Consensus 240 ~~l~~~~~-~~~~~~-~-~~~~t~~e~~~~i~~~~~~ 273 (338)
.++..+.. ++.|++ + ++.+|+.|+++.+.+.+|.
T Consensus 200 ~~l~~~~~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~ 236 (318)
T 2r6j_A 200 KVATDPRALNRVVIYRPSTNIITQLELISRWEKKIGK 236 (318)
T ss_dssp HHTTCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTC
T ss_pred HHhcCccccCeEEEecCCCCccCHHHHHHHHHHHhCC
Confidence 99987654 445654 4 4789999999999999874
No 93
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=99.94 E-value=1.6e-26 Score=204.32 Aligned_cols=223 Identities=15% Similarity=0.147 Sum_probs=157.6
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCC-C-----cHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDP-D-----NKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~-----~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 76 (338)
++||+|+||||||+||++++++|+++|++|++++|++ . ....+..+.. .+++++.+|++|++++.++++
T Consensus 2 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~-----~~v~~v~~D~~d~~~l~~a~~ 76 (321)
T 3c1o_A 2 SHMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRS-----MGVTIIEGEMEEHEKMVSVLK 76 (321)
T ss_dssp --CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHH-----TTCEEEECCTTCHHHHHHHHT
T ss_pred CcccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhc-----CCcEEEEecCCCHHHHHHHHc
Confidence 3578999999999999999999999999999999986 2 1111211111 478999999999999999999
Q ss_pred CccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhc
Q 040253 77 GCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSV 156 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~ 156 (338)
++|+|||+++... +.++.+++++|++.+++++||+ | +|+.. .+|.. +
T Consensus 77 ~~d~vi~~a~~~~--------------~~~~~~l~~aa~~~g~v~~~v~-S---~~g~~------~~~~~---------~ 123 (321)
T 3c1o_A 77 QVDIVISALPFPM--------------ISSQIHIINAIKAAGNIKRFLP-S---DFGCE------EDRIK---------P 123 (321)
T ss_dssp TCSEEEECCCGGG--------------SGGGHHHHHHHHHHCCCCEEEC-S---CCSSC------GGGCC---------C
T ss_pred CCCEEEECCCccc--------------hhhHHHHHHHHHHhCCccEEec-c---ccccC------ccccc---------c
Confidence 9999999998521 3446889999988764788882 3 45411 12222 1
Q ss_pred cCC-CchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhh-hhcccCC-CCCCCCCC-CccccHH
Q 040253 157 KMT-GWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITAL-SPITRNE-AHYPIIKQ-GQFVHLD 232 (338)
Q Consensus 157 ~~p-~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~-~~~i~v~ 232 (338)
..| .+.| .+|..+|.+++ +.+++++++||+.++|+... .+.... ....+.. ..++.+.. +++++++
T Consensus 124 ~~p~~~~y-~sK~~~e~~~~----~~~~~~~~lrp~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 193 (321)
T 3c1o_A 124 LPPFESVL-EKKRIIRRAIE----AAALPYTYVSANCFGAYFVN-----YLLHPSPHPNRNDDIVIYGTGETKFVLNYEE 193 (321)
T ss_dssp CHHHHHHH-HHHHHHHHHHH----HHTCCBEEEECCEEHHHHHH-----HHHCCCSSCCTTSCEEEETTSCCEEEEECHH
T ss_pred CCCcchHH-HHHHHHHHHHH----HcCCCeEEEEeceecccccc-----ccccccccccccCceEEecCCCcceeEeeHH
Confidence 112 4579 99999999885 35899999999998875311 111000 0011111 12222222 6799999
Q ss_pred HHHHHHHHhhcCCCC-CCceEE-e-cCCCCHHHHHHHHHHhCCC
Q 040253 233 DLCSAHIFLFEHPNA-KGRYIC-S-SHPATILELAKFLREKYPE 273 (338)
Q Consensus 233 D~a~~~~~~l~~~~~-~~~~~~-~-~~~~t~~e~~~~i~~~~~~ 273 (338)
|+|++++.++..+.. ++.|++ + ++.+|+.|+++.+.+.+|.
T Consensus 194 Dva~~~~~~l~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~ 237 (321)
T 3c1o_A 194 DIAKYTIKVACDPRCCNRIVIYRPPKNIISQNELISLWEAKSGL 237 (321)
T ss_dssp HHHHHHHHHHHCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhCccccCeEEEEeCCCCcccHHHHHHHHHHHcCC
Confidence 999999999987654 445665 4 4789999999999999874
No 94
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=99.93 E-value=3.2e-26 Score=200.61 Aligned_cols=239 Identities=14% Similarity=0.047 Sum_probs=166.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+|+||||+|+||++++++|+++|++|++++|+.+............ ...++.++.+|++|.+++.++++
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 103 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ-TGNKVHAIQCDVRDPDMVQNTVSELIKVAG 103 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-HSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-cCCceEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence 3589999999999999999999999999999999865544332211100 01468999999999988877764
Q ss_pred CccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|+|||+||.... ...+..+..+++|+.++.++++++.. .....++|++||...+.
T Consensus 104 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~-------------- 169 (302)
T 1w6u_A 104 HPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAET-------------- 169 (302)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHH--------------
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccccc--------------
Confidence 56999999985432 11223456889999999998877643 22257999999987663
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+..+...|+.+|.+.|.+++.++.+ +|++++++|||.++++.................... ..
T Consensus 170 --------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--p~---- 235 (302)
T 1w6u_A 170 --------GSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRI--PC---- 235 (302)
T ss_dssp --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTC--TT----
T ss_pred --------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcC--Cc----
Confidence 1124568999999999999999888 689999999999998743221111100000000111 11
Q ss_pred CCccccHHHHHHHHHHhhcCCC---CCCceEEe-cCCCCHHHHHHHHHHhCC
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPN---AKGRYICS-SHPATILELAKFLREKYP 272 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~-~~~~t~~e~~~~i~~~~~ 272 (338)
.++++++|+|++++.++.... .+..|+++ +..++++++++.+.+..+
T Consensus 236 -~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g 286 (302)
T 1w6u_A 236 -GRLGTVEELANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK 286 (302)
T ss_dssp -SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred -CCCCCHHHHHHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence 358899999999999997543 24467775 456777777777665543
No 95
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=99.93 E-value=9.2e-26 Score=191.52 Aligned_cols=215 Identities=16% Similarity=0.151 Sum_probs=156.5
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC---CccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---GCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~ 80 (338)
.+|+|+||||+|+||++++++|+++|++|++++|+.+........ . ++++++.+|++|.+++.++++ ++|+
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~--~----~~~~~~~~D~~~~~~~~~~~~~~~~id~ 79 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE--C----PGIEPVCVDLGDWDATEKALGGIGPVDL 79 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--S----TTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh--c----cCCCcEEecCCCHHHHHHHHHHcCCCCE
Confidence 468999999999999999999999999999999986554433221 1 356788999999999888876 5899
Q ss_pred EEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCCCCCchh
Q 040253 81 VFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLD 151 (338)
Q Consensus 81 vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~ 151 (338)
|||+||..... ..+..+..+++|+.++.++++++... +..++||++||..++. .
T Consensus 80 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~--~--------------- 142 (244)
T 1cyd_A 80 LVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHV--T--------------- 142 (244)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--C---------------
T ss_pred EEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcC--C---------------
Confidence 99999864321 11233467899999999998877553 2136899999987774 1
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCC-ChhHHHhhhhcccCCCCCCCCCCCc
Q 040253 152 FVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSM-PPSLITALSPITRNEAHYPIIKQGQ 227 (338)
Q Consensus 152 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (338)
.++...|+.+|.+.|.+++.++++ .+++++++||+.++++...... ...+.... ..+.+ . .+
T Consensus 143 -----~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~--~~~~~--~-----~~ 208 (244)
T 1cyd_A 143 -----FPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKL--KERHP--L-----RK 208 (244)
T ss_dssp -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHH--HHHST--T-----SS
T ss_pred -----CCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHH--HhcCC--c-----cC
Confidence 123458999999999999999887 4899999999999987532110 11111111 11111 1 57
Q ss_pred cccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 228 FVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 228 ~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
+++++|+|++++.++..+.. +..+++.+
T Consensus 209 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 239 (244)
T 1cyd_A 209 FAEVEDVVNSILFLLSDRSASTSGGGILVDA 239 (244)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSSEEEEST
T ss_pred CCCHHHHHHHHHHHhCchhhcccCCEEEECC
Confidence 99999999999999976432 34556644
No 96
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.93 E-value=2.1e-25 Score=193.02 Aligned_cols=241 Identities=15% Similarity=0.139 Sum_probs=158.1
Q ss_pred CCC-CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHh-cCCCCCCcEEEEecccCCCCCchhhhC--
Q 040253 1 MGS-IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLL-ELPKASTHLTLWKADLAEEGNFDEPIR-- 76 (338)
Q Consensus 1 m~~-~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~-- 76 (338)
|.. .+|+|+||||+|+||++++++|+++|++|++++|+.+......... .......++.++.+|++|++++.++++
T Consensus 1 m~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (278)
T 1spx_A 1 MTRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTT 80 (278)
T ss_dssp -CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHH
Confidence 543 4689999999999999999999999999999999865544433221 101112468999999999998888776
Q ss_pred -----CccEEEEecccCCCC---------CCCccchhhhhhhHHHHHHHHHHHhC---CCccEEEEecCcee-eeccCCC
Q 040253 77 -----GCTGVFHLATPMDFE---------SKDPENEVIRPTINGMVSIMRACKNA---KTVRRLVFTSSAGT-LDVEEHR 138 (338)
Q Consensus 77 -----~~d~vi~~a~~~~~~---------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v-~~~~~~~ 138 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++... . ..++|++||... +.
T Consensus 81 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~~----- 154 (278)
T 1spx_A 81 LGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSST-KGEIVNISSIASGLH----- 154 (278)
T ss_dssp HHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCTTSSSS-----
T ss_pred HHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCeEEEEeccccccc-----
Confidence 899999999864321 22234567899999999998887653 1 169999999876 43
Q ss_pred CCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCC--hhH---HHhh
Q 040253 139 KPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMP--PSL---ITAL 210 (338)
Q Consensus 139 ~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~--~~~---~~~~ 210 (338)
+.++...|+.+|...+.+.+.++.+ +|+++++++||.+.++....... ... ....
T Consensus 155 -----------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~ 217 (278)
T 1spx_A 155 -----------------ATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTM 217 (278)
T ss_dssp -----------------CCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHH
T ss_pred -----------------CCCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHH
Confidence 1123458999999999999998876 48999999999999875332100 000 0000
Q ss_pred hhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCC----CCCceEEe-cCCCCHHHHHHHHHHh
Q 040253 211 SPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN----AKGRYICS-SHPATILELAKFLREK 270 (338)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~----~~~~~~~~-~~~~t~~e~~~~i~~~ 270 (338)
...... ... .++++.+|+|++++.++..+. .+..+++. +...++.++++.+.+.
T Consensus 218 ~~~~~~-~p~-----~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~ 276 (278)
T 1spx_A 218 ATMKEC-VPA-----GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKL 276 (278)
T ss_dssp HHHHHH-CTT-----SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC-----------
T ss_pred HHHHhc-CCC-----cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHH
Confidence 000010 111 358999999999999987532 24467774 5679999999988765
No 97
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=99.93 E-value=1.8e-25 Score=186.89 Aligned_cols=193 Identities=16% Similarity=0.164 Sum_probs=141.8
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHH-HCCCeEEEEEcCCC-cHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLL-ERGYAVRATVRDPD-NKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
+||++|+||||+|+||++++++|+ +.|++|++++|+++ ....+.. ...+++++.+|++|.+++.++++++|+
T Consensus 3 ~mmk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~d~ 76 (221)
T 3r6d_A 3 AMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII------DHERVTVIEGSFQNPGXLEQAVTNAEV 76 (221)
T ss_dssp CSCSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH------TSTTEEEEECCTTCHHHHHHHHTTCSE
T ss_pred ceEEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc------CCCceEEEECCCCCHHHHHHHHcCCCE
Confidence 345679999999999999999999 89999999999865 3332210 115789999999999999999999999
Q ss_pred EEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCC
Q 040253 81 VFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTG 160 (338)
Q Consensus 81 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~ 160 (338)
|||+|+.. |+. +.++++++++.+ .++||++||..+|+.. .....+. ......
T Consensus 77 vv~~ag~~--------------n~~-~~~~~~~~~~~~-~~~iv~iSs~~~~~~~---~~~~~~~---------~~~~~~ 128 (221)
T 3r6d_A 77 VFVGAMES--------------GSD-MASIVKALSRXN-IRRVIGVSMAGLSGEF---PVALEKW---------TFDNLP 128 (221)
T ss_dssp EEESCCCC--------------HHH-HHHHHHHHHHTT-CCEEEEEEETTTTSCS---CHHHHHH---------HHHTSC
T ss_pred EEEcCCCC--------------Chh-HHHHHHHHHhcC-CCeEEEEeeceecCCC---Ccccccc---------cccccc
Confidence 99999842 444 889999999988 8899999999887511 1000000 011112
Q ss_pred chHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHH
Q 040253 161 WMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIF 240 (338)
Q Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~ 240 (338)
+.|+.+|..+|..++ +.+++++++||+.++++........ . .....+ ...+++.+|+|++++.
T Consensus 129 ~~y~~~K~~~e~~~~----~~~i~~~~vrpg~v~~~~~~~~~~~--------~-~~~~~~----~~~~~~~~dvA~~~~~ 191 (221)
T 3r6d_A 129 ISYVQGERQARNVLR----ESNLNYTILRLTWLYNDPEXTDYEL--------I-PEGAQF----NDAQVSREAVVKAIFD 191 (221)
T ss_dssp HHHHHHHHHHHHHHH----HSCSEEEEEEECEEECCTTCCCCEE--------E-CTTSCC----CCCEEEHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH----hCCCCEEEEechhhcCCCCCcceee--------c-cCCccC----CCceeeHHHHHHHHHH
Confidence 279999999999885 4799999999999998732211100 0 000111 1348999999999999
Q ss_pred hh--cCCC
Q 040253 241 LF--EHPN 246 (338)
Q Consensus 241 ~l--~~~~ 246 (338)
++ ..+.
T Consensus 192 l~~~~~~~ 199 (221)
T 3r6d_A 192 ILHAADET 199 (221)
T ss_dssp HHTCSCCG
T ss_pred HHHhcChh
Confidence 99 7654
No 98
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=99.93 E-value=4.8e-25 Score=188.88 Aligned_cols=221 Identities=18% Similarity=0.122 Sum_probs=157.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+|+||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRM--EGHDVSSVVMDVTNTESVQNAVRSVHEQEG 89 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 358899999999999999999999999999999986554433221111 11468999999999998887765
Q ss_pred CccEEEEecccCC-CC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 GCTGVFHLATPMD-FE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 ~~d~vi~~a~~~~-~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|+|||+||... .. ..+.....+++|+.++.++++++.. .+ ..++|++||.+.+. ..
T Consensus 90 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~--------- 157 (260)
T 3awd_A 90 RVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLI--VN--------- 157 (260)
T ss_dssp CCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CC---------
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcc--cC---------
Confidence 7999999998643 11 1112246789999999999888754 34 57999999986553 10
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCC-CCCChhHHHhhhhcccCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLT-SSMPPSLITALSPITRNEAHYPI 222 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 222 (338)
+..|...|+.+|.+.|.+++.++++ +|++++++|||.++++... ........... ..+. ..
T Consensus 158 ---------~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~--~~~~--~~-- 222 (260)
T 3awd_A 158 ---------RPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAW--IAGT--PM-- 222 (260)
T ss_dssp ---------SSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHH--HHTC--TT--
T ss_pred ---------CCCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHH--HhcC--Cc--
Confidence 1123468999999999999999888 6999999999999998643 10011111101 0111 11
Q ss_pred CCCCccccHHHHHHHHHHhhcCCC---CCCceEEecC
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSSH 256 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~~ 256 (338)
.++++.+|+|++++.++.... .+..|++++.
T Consensus 223 ---~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 256 (260)
T 3awd_A 223 ---GRVGQPDEVASVVQFLASDAASLMTGAIVNVDAG 256 (260)
T ss_dssp ---SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ---CCCCCHHHHHHHHHHHhCchhccCCCcEEEECCc
Confidence 458899999999999987532 2446777554
No 99
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=99.93 E-value=4.1e-25 Score=189.97 Aligned_cols=219 Identities=15% Similarity=0.140 Sum_probs=144.1
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh-------
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI------- 75 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------- 75 (338)
..+|+||||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.+++
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQK--KGFQVTGSVCDASLRPEREKLMQTVSSMF 89 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCeeEEEECCCCCHHHHHHHHHHHHHHh
Confidence 3468999999999999999999999999999999986554433221111 1246899999999998887766
Q ss_pred -CCccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCC
Q 040253 76 -RGCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 76 -~~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
.++|+|||+||..... ..+..+..+++|+.++.++++++ ++.+ .+++|++||...+.
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~------------ 156 (266)
T 1xq1_A 90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVV------------ 156 (266)
T ss_dssp TTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC------------------
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhcc------------
Confidence 5789999999864321 12233467899999999998887 3445 68999999987764
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPI 222 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (338)
+..+...|+.+|...+.+++.++.++ |++++++|||.++++.......... ...... ....
T Consensus 157 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~---~~~~~~-~~~~-- 220 (266)
T 1xq1_A 157 ----------SASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEF---KKVVIS-RKPL-- 220 (266)
T ss_dssp --------------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC----------------------------
T ss_pred ----------CCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHH---HHHHHh-cCCC--
Confidence 11234589999999999999998875 8999999999999986432110000 000000 0011
Q ss_pred CCCCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
.++++.+|+|+++..++.... .+..+++.+
T Consensus 221 ---~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 253 (266)
T 1xq1_A 221 ---GRFGEPEEVSSLVAFLCMPAASYITGQTICVDG 253 (266)
T ss_dssp ------CCGGGGHHHHHHHTSGGGTTCCSCEEECCC
T ss_pred ---CCCcCHHHHHHHHHHHcCccccCccCcEEEEcC
Confidence 358899999999999987532 234566644
No 100
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=99.93 E-value=4.2e-25 Score=187.46 Aligned_cols=214 Identities=16% Similarity=0.175 Sum_probs=155.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC---CccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---GCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~ 80 (338)
.+++|+||||+|+||++++++|+++|++|++++|+.+....+... . ++++++.+|++|.+++.++++ ++|+
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~--~----~~~~~~~~D~~~~~~~~~~~~~~~~id~ 79 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRE--C----PGIEPVCVDLGDWEATERALGSVGPVDL 79 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH--S----TTCEEEECCTTCHHHHHHHHTTCCCCCE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--c----CCCCEEEEeCCCHHHHHHHHHHcCCCCE
Confidence 468999999999999999999999999999999986544433221 1 256788999999999888876 5899
Q ss_pred EEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCCCCCchh
Q 040253 81 VFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLD 151 (338)
Q Consensus 81 vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~ 151 (338)
|||+||..... ..+..+..+++|+.++.++.+++... +...++|++||...+.
T Consensus 80 vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~------------------ 141 (244)
T 3d3w_A 80 LVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQR------------------ 141 (244)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS------------------
T ss_pred EEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhcc------------------
Confidence 99999864321 11234568899999999988877543 2147899999987663
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCC--ChhHHHhhhhcccCCCCCCCCCCC
Q 040253 152 FVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSM--PPSLITALSPITRNEAHYPIIKQG 226 (338)
Q Consensus 152 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 226 (338)
+..+...|+.+|.+.|.+++.++.+ .|++++++|||.++++...... ........ ... .. .
T Consensus 142 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~---~~~--~~-----~ 207 (244)
T 3d3w_A 142 ----AVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTML---NRI--PL-----G 207 (244)
T ss_dssp ----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHH---HTC--TT-----C
T ss_pred ----CCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHH---hhC--CC-----C
Confidence 1124568999999999999999877 4899999999999987532110 11111111 011 11 4
Q ss_pred ccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 227 QFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 227 ~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
++++++|+|++++.++.... .+..|++++
T Consensus 208 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 239 (244)
T 3d3w_A 208 KFAEVEHVVNAILFLLSDRSGMTTGSTLPVEG 239 (244)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCcCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence 68999999999999997542 244677754
No 101
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=99.93 E-value=3.5e-24 Score=184.55 Aligned_cols=216 Identities=18% Similarity=0.119 Sum_probs=162.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+++||||+|+||.+++++|+++|++|++++|+.+.......... .++.++.+|++|.+++.++++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVG-----RGAVHHVVDLTNEVSVRALIDFTIDTFG 84 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHC-----TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC-----CCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999999887665544331 568899999999998888775
Q ss_pred CccEEEEecccCCC-C------CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCC
Q 040253 77 GCTGVFHLATPMDF-E------SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
++|++||+||.... . ..+..+..+++|+.++.++++++ ++.+ ..++|++||...+.
T Consensus 85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~------------ 151 (271)
T 3tzq_B 85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHA------------ 151 (271)
T ss_dssp CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS------------
T ss_pred CCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcC------------
Confidence 79999999996532 1 12233468899999999999888 5555 67999999987663
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPI 222 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (338)
+..+...|+.+|.+.+.+.+.++.+ +|+++++++||.++++............... .....
T Consensus 152 ----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~----~~~~~-- 215 (271)
T 3tzq_B 152 ----------AYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFA----THHLA-- 215 (271)
T ss_dssp ----------BCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHH----TTSTT--
T ss_pred ----------CCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHH----hcCCC--
Confidence 1124568999999999999999988 5899999999999998754333222221111 11111
Q ss_pred CCCCccccHHHHHHHHHHhhcCCCC---CCceEEecC
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSSH 256 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~~ 256 (338)
.++...+|+|+++++++..... +..+++.+.
T Consensus 216 ---~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 249 (271)
T 3tzq_B 216 ---GRIGEPHEIAELVCFLASDRAAFITGQVIAADSG 249 (271)
T ss_dssp ---SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ---CCCcCHHHHHHHHHHHhCcccCCcCCCEEEECCC
Confidence 4588999999999999975432 446677544
No 102
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=99.93 E-value=4e-25 Score=189.20 Aligned_cols=224 Identities=13% Similarity=0.142 Sum_probs=158.5
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|++|||||+|+||++++++|+++|++|++++|+.+.......... .++.++.+|++|++++.++++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIG-----PAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----CCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 35899999999999999999999999999999998765554433321 468999999999998887775
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++.++++++... +...++|++||...+.
T Consensus 82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------- 147 (259)
T 4e6p_A 82 GLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRR-------------- 147 (259)
T ss_dssp SCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--------------
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhcc--------------
Confidence 799999999964421 12334567889999999999887543 1135899999987663
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCC-CCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNE-AHYPII 223 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 223 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.++++..... ...+........... ..+...
T Consensus 148 --------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 218 (259)
T 4e6p_A 148 --------GEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGV-DALFARYENRPRGEKKRLVGEA 218 (259)
T ss_dssp --------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHH-HHHHHHHHTCCTTHHHHHHHHH
T ss_pred --------CCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhh-hhhhhhhccCChHHHHHHHhcc
Confidence 11245689999999999999999875 89999999999998753210 000000000000000 000000
Q ss_pred -CCCccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 224 -KQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 224 -~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
...++.+++|+|+++++++..... +..+++++
T Consensus 219 ~p~~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdg 254 (259)
T 4e6p_A 219 VPFGRMGTAEDLTGMAIFLASAESDYIVSQTYNVDG 254 (259)
T ss_dssp STTSSCBCTHHHHHHHHHTTSGGGTTCCSCEEEEST
T ss_pred CCCCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECc
Confidence 115699999999999999864332 45778754
No 103
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=99.93 E-value=8.6e-25 Score=187.06 Aligned_cols=207 Identities=16% Similarity=0.181 Sum_probs=156.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+...... .++.++.+|++|++++.++++
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 95 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD-----------PDIHTVAGDISKPETADRIVREGIERFG 95 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS-----------TTEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-----------CceEEEEccCCCHHHHHHHHHHHHHHCC
Confidence 46899999999999999999999999999999997654221 468999999999998887765
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++.++++++ ++.+ ..++|++||..++...
T Consensus 96 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~------------ 162 (260)
T 3un1_A 96 RIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPM------------ 162 (260)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCB------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCC------------
Confidence 799999999865421 22334567889999999999877 4455 6799999997665310
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.++++.... ...... ......
T Consensus 163 --------~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~----~~~~~~----~~~~p~---- 222 (260)
T 3un1_A 163 --------VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA----ETHSTL----AGLHPV---- 222 (260)
T ss_dssp --------TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG----GGHHHH----HTTSTT----
T ss_pred --------CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH----HHHHHH----hccCCC----
Confidence 11245689999999999999999987 8999999999999886432 111111 111111
Q ss_pred CCccccHHHHHHHHHHhhcCCCCCC-ceEEec
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPNAKG-RYICSS 255 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~~~~-~~~~~~ 255 (338)
.++.+++|+|++++.+.+.....| .+++++
T Consensus 223 -~r~~~~~dva~av~~L~~~~~itG~~i~vdG 253 (260)
T 3un1_A 223 -GRMGEIRDVVDAVLYLEHAGFITGEILHVDG 253 (260)
T ss_dssp -SSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred -CCCcCHHHHHHHHHHhcccCCCCCcEEEECC
Confidence 468899999999999965544444 677754
No 104
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=99.92 E-value=1.7e-24 Score=184.45 Aligned_cols=218 Identities=18% Similarity=0.154 Sum_probs=156.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|+|+||||+|+||++++++|+++|++|++++|+.+.......... .....++.++.+|++|++++.++++ +
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHW-HAYADKVLRVRADVADEGDVNAAIAATMEQFGA 80 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHS-TTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHH-HhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999999999999998655444332220 1112578999999999998888775 7
Q ss_pred ccEEEEecccCCCCC--------CCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCC
Q 040253 78 CTGVFHLATPMDFES--------KDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 78 ~d~vi~~a~~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
+|+|||+||...... .+..+..+++|+.++.++++++. +.+ .+++|++||...+. .
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~--~--------- 148 (250)
T 2cfc_A 81 IDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLV--A--------- 148 (250)
T ss_dssp CCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--C---------
T ss_pred CCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcc--C---------
Confidence 999999998654221 12344678899999977766553 345 68999999987664 1
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCC-ChhHHHhhhhcccCCCCCC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSM-PPSLITALSPITRNEAHYP 221 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~ 221 (338)
..+...|+.+|.+.+.+++.++.++ |++++++|||.++++...... ...+.. ..... ...
T Consensus 149 -----------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~---~~~~~-~~~- 212 (250)
T 2cfc_A 149 -----------FPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRD---QVLAR-IPQ- 212 (250)
T ss_dssp -----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHH---HHHTT-CTT-
T ss_pred -----------CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHH---HHHhc-CCC-
Confidence 1245689999999999999998876 899999999999998642100 011111 01111 111
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
..+.+.+|+|++++.++..+.. +..+++.+
T Consensus 213 ----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 245 (250)
T 2cfc_A 213 ----KEIGTAAQVADAVMFLAGEDATYVNGAALVMDG 245 (250)
T ss_dssp ----CSCBCHHHHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred ----CCCcCHHHHHHHHHHHcCchhhcccCCEEEECC
Confidence 4588999999999999976432 33566654
No 105
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=99.92 E-value=1.4e-25 Score=194.45 Aligned_cols=239 Identities=16% Similarity=0.155 Sum_probs=170.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHH-HhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKH-LLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+.+....... +........++.++.+|++|++++.++++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 46899999999999999999999999999999998766554433 22222112378999999999998877764
Q ss_pred -CccEEEEecccCCC------CCCCccchhhhhhhHHHHHHHHHHHhCC---CccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 -GCTGVFHLATPMDF------ESKDPENEVIRPTINGMVSIMRACKNAK---TVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 -~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|++||+||.... ...+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 90 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------- 156 (281)
T 3svt_A 90 GRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASN------------- 156 (281)
T ss_dssp SCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHS-------------
T ss_pred CCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcC-------------
Confidence 68999999996221 1122335688899999999988775432 145999999987764
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCC-ChhHHHhhhhcccCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSM-PPSLITALSPITRNEAHYPI 222 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 222 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+.++...... ........ .... ..
T Consensus 157 ---------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~--~~~~--p~-- 221 (281)
T 3svt_A 157 ---------THRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDY--AMCT--PL-- 221 (281)
T ss_dssp ---------CCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHH--HHHC--SS--
T ss_pred ---------CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHH--HhcC--CC--
Confidence 11245689999999999999999876 699999999999887532100 00000000 0011 11
Q ss_pred CCCCccccHHHHHHHHHHhhcCCCC---CCceEEe-cCCCC-HHHHHHHHHHhCCC
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICS-SHPAT-ILELAKFLREKYPE 273 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~-~~~~t-~~e~~~~i~~~~~~ 273 (338)
.++.+++|+|+++++++..... +..+++. +...+ ..++++.+.+.++.
T Consensus 222 ---~r~~~~~dva~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~ 274 (281)
T 3svt_A 222 ---PRQGEVEDVANMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGR 274 (281)
T ss_dssp ---SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCT
T ss_pred ---CCCCCHHHHHHHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCC
Confidence 4688999999999999975432 4567774 44444 67788888877664
No 106
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=99.92 E-value=1.6e-24 Score=184.28 Aligned_cols=221 Identities=13% Similarity=0.103 Sum_probs=150.5
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEE-EcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC---
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRAT-VRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--- 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 76 (338)
|...+|+|+||||+|+||++++++|+++|++|+++ .|++............ ...++.++.+|++|++++.++++
T Consensus 1 M~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (247)
T 2hq1_A 1 MQLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKA--AGINVVVAKGDVKNPEDVENMVKTAM 78 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHH--TTCCEEEEESCTTSHHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 66667999999999999999999999999999998 4565544433222111 11568999999999998887765
Q ss_pred ----CccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcC
Q 040253 77 ----GCTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYD 143 (338)
Q Consensus 77 ----~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~ 143 (338)
++|+|||+||.... ...+..+..+++|+.++.++++++.. .+ ..+||++||...+. .
T Consensus 79 ~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~------- 148 (247)
T 2hq1_A 79 DAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGII--G------- 148 (247)
T ss_dssp HHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC---------------
T ss_pred HhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcc--C-------
Confidence 79999999986431 12334557899999998888877653 34 57999999975442 1
Q ss_pred CCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCC
Q 040253 144 ETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHY 220 (338)
Q Consensus 144 e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (338)
..+...|+.+|.+.|.+++.++.++ ++++++++||.+.++.... ......... .. ....
T Consensus 149 -------------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~---~~-~~~~ 210 (247)
T 2hq1_A 149 -------------NAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDV-LPDKVKEMY---LN-NIPL 210 (247)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHH---HT-TSTT
T ss_pred -------------CCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhh-cchHHHHHH---Hh-hCCC
Confidence 0134589999999999999998875 8999999999987653211 111111111 01 1111
Q ss_pred CCCCCCccccHHHHHHHHHHhhcCCC---CCCceEEecC
Q 040253 221 PIIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSSH 256 (338)
Q Consensus 221 ~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~~ 256 (338)
.++++++|+|+++..++..+. .+..|++++.
T Consensus 211 -----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 244 (247)
T 2hq1_A 211 -----KRFGTPEEVANVVGFLASDDSNYITGQVINIDGG 244 (247)
T ss_dssp -----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -----CCCCCHHHHHHHHHHHcCcccccccCcEEEeCCC
Confidence 458999999999999987532 2446787553
No 107
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=99.92 E-value=1.2e-24 Score=186.64 Aligned_cols=224 Identities=16% Similarity=0.159 Sum_probs=157.0
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
..+|+||||||+|+||++++++|+++|++|++++|+.+............ ...++.++.+|++|++++.++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEK-FGVRVLEVAVDVATPEGVDAVVESVRSSF 83 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-HCCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh-cCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 34689999999999999999999999999999999865544332211100 01468899999999998887765
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||...+. .
T Consensus 84 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~---------- 150 (263)
T 3ai3_A 84 GGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQ--P---------- 150 (263)
T ss_dssp SSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--C----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcC--C----------
Confidence 799999999865321 112335678899999999888764 334 57999999987774 1
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCCh-------hHHHhhhhcccC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPP-------SLITALSPITRN 216 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~-------~~~~~~~~~~~~ 216 (338)
..+...|+.+|.+.+.+.+.++.+ +|+++++++||.++++........ ............
T Consensus 151 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (263)
T 3ai3_A 151 ----------LWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADE 220 (263)
T ss_dssp ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHH
T ss_pred ----------CCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhc
Confidence 123458999999999999999887 589999999999998752110000 000000000000
Q ss_pred CCCCCCCCCCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 217 EAHYPIIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 217 ~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
.... .++++++|+|++++.++..+. .+..|++++
T Consensus 221 ~~p~-----~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdg 257 (263)
T 3ai3_A 221 HAPI-----KRFASPEELANFFVFLCSERATYSVGSAYFVDG 257 (263)
T ss_dssp HCTT-----CSCBCHHHHHHHHHHHTSTTCTTCCSCEEEEST
T ss_pred CCCC-----CCCcCHHHHHHHHHHHcCccccCCCCcEEEECC
Confidence 0111 468999999999999997543 244677744
No 108
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=99.92 E-value=5e-25 Score=188.54 Aligned_cols=221 Identities=15% Similarity=0.159 Sum_probs=158.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcC-CCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRD-PDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+ ++........... ...++.++.+|++|++++.++++
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRA--DGGDAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHH--TTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHh--cCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999999999999998 6655443322111 12578999999999998888776
Q ss_pred -CccEEEEeccc-CCCC-----CCCccchhhhhhhHHHHHHHHHHHhC--------CCccEEEEecCceeeeccCCCCCC
Q 040253 77 -GCTGVFHLATP-MDFE-----SKDPENEVIRPTINGMVSIMRACKNA--------KTVRRLVFTSSAGTLDVEEHRKPV 141 (338)
Q Consensus 77 -~~d~vi~~a~~-~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--------~~~~~~v~~Ss~~v~~~~~~~~~~ 141 (338)
++|+|||+||. .... ..+..+..+++|+.++.++++++... +...++|++||...+. ..
T Consensus 84 g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~~---- 157 (258)
T 3afn_B 84 GGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHT--GG---- 157 (258)
T ss_dssp SSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHH--CC----
T ss_pred CCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhcc--CC----
Confidence 79999999986 3211 11223467889999999988866421 1126899999986653 00
Q ss_pred cCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCC
Q 040253 142 YDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEA 218 (338)
Q Consensus 142 ~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 218 (338)
..+...|+.+|.+.|.+++.++.++ |++++++|||.++++..... ...+.... .. ..
T Consensus 158 ---------------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~---~~-~~ 217 (258)
T 3afn_B 158 ---------------GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK-TQDVRDRI---SN-GI 217 (258)
T ss_dssp ---------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC-CHHHHHHH---HT-TC
T ss_pred ---------------CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc-CHHHHHHH---hc-cC
Confidence 1245689999999999999988775 89999999999999864332 11111111 11 11
Q ss_pred CCCCCCCCccccHHHHHHHHHHhhcCCC----CCCceEEecCC
Q 040253 219 HYPIIKQGQFVHLDDLCSAHIFLFEHPN----AKGRYICSSHP 257 (338)
Q Consensus 219 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~----~~~~~~~~~~~ 257 (338)
.. .++++++|+|++++.++.... .+..|+++++.
T Consensus 218 ~~-----~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 218 PM-----GRFGTAEEMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp TT-----CSCBCGGGTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred CC-----CcCCCHHHHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 11 468999999999999997532 24467776543
No 109
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}
Probab=99.92 E-value=2.6e-25 Score=183.24 Aligned_cols=188 Identities=14% Similarity=0.085 Sum_probs=144.8
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC---ccEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG---CTGV 81 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~d~v 81 (338)
+|+|+||||+|+||++++++|+ +|++|++++|+.. .+.+|++|++++.+++++ +|+|
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------------~~~~D~~~~~~~~~~~~~~~~~d~v 62 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------------DVTVDITNIDSIKKMYEQVGKVDAI 62 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------------SEECCTTCHHHHHHHHHHHCCEEEE
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------------ceeeecCCHHHHHHHHHHhCCCCEE
Confidence 4589999999999999999999 9999999999753 357899999988888764 8999
Q ss_pred EEecccCCCCC-----CCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhh
Q 040253 82 FHLATPMDFES-----KDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRS 155 (338)
Q Consensus 82 i~~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~ 155 (338)
||+||...... .+.....++.|+.++.++++++...- ...++|++||...+.
T Consensus 63 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~---------------------- 120 (202)
T 3d7l_A 63 VSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMED---------------------- 120 (202)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTS----------------------
T ss_pred EECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcC----------------------
Confidence 99999643211 11223567899999999999987762 026899999976653
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHc--CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHH
Q 040253 156 VKMTGWMYFVSKTLAEQAAWKFAEEN--NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDD 233 (338)
Q Consensus 156 ~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D 233 (338)
+..+...|+.+|...|.+++.++.++ |++++++||+.++++... . +... ..+++++++|
T Consensus 121 ~~~~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~---------~-----~~~~-----~~~~~~~~~d 181 (202)
T 3d7l_A 121 PIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDK---------L-----EPFF-----EGFLPVPAAK 181 (202)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHH---------H-----GGGS-----TTCCCBCHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhh---------h-----hhhc-----cccCCCCHHH
Confidence 11245689999999999999988764 899999999999987421 0 0000 1257899999
Q ss_pred HHHHHHHhhcCCCCCCceEE
Q 040253 234 LCSAHIFLFEHPNAKGRYIC 253 (338)
Q Consensus 234 ~a~~~~~~l~~~~~~~~~~~ 253 (338)
+|++++.++.....+..|++
T Consensus 182 va~~~~~~~~~~~~G~~~~v 201 (202)
T 3d7l_A 182 VARAFEKSVFGAQTGESYQV 201 (202)
T ss_dssp HHHHHHHHHHSCCCSCEEEE
T ss_pred HHHHHHHhhhccccCceEec
Confidence 99999998865544557765
No 110
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=99.92 E-value=7e-25 Score=189.34 Aligned_cols=220 Identities=17% Similarity=0.122 Sum_probs=156.8
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEc-CCCcHHHHHH-HhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVR-DPDNKKKVKH-LLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
..+|+||||||+|+||++++++|+++|++|++++| +.+....... +... ..++.++.+|++|++++.++++
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~ 95 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL---GAQGVAIQADISKPSEVVALFDKAVS 95 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHH
Confidence 34689999999999999999999999999999999 4433333221 2111 2568899999999998888775
Q ss_pred ---CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceee-eccCCCCCCcCCCC
Q 040253 77 ---GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTL-DVEEHRKPVYDETS 146 (338)
Q Consensus 77 ---~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~-~~~~~~~~~~~e~~ 146 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++...- ..++||++||...+ . .
T Consensus 96 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~--~---------- 163 (274)
T 1ja9_A 96 HFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMT--G---------- 163 (274)
T ss_dssp HHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCC--S----------
T ss_pred HcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccC--C----------
Confidence 799999999865421 112234678999999999998886541 02689999998776 3 1
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCC-----------CCC-hhHHHhhh
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTS-----------SMP-PSLITALS 211 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~-----------~~~-~~~~~~~~ 211 (338)
..+...|+.+|.+.|.+++.++.++ +++++++|||.++++.... ... .... .
T Consensus 164 ----------~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~ 230 (274)
T 1ja9_A 164 ----------IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKID---E 230 (274)
T ss_dssp ----------CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHH---H
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHH---H
Confidence 1134589999999999999998875 8999999999998764220 000 0000 0
Q ss_pred hcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCC---CCCceEEecC
Q 040253 212 PITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSSH 256 (338)
Q Consensus 212 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~~ 256 (338)
.. ..... ..++++++|+|+++..++..+. .+..|+++++
T Consensus 231 ~~-~~~~~-----~~~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG 272 (274)
T 1ja9_A 231 GL-ANMNP-----LKRIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272 (274)
T ss_dssp HH-HHTST-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HH-HhcCC-----CCCccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence 00 00011 1468999999999999997543 2446787654
No 111
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=99.92 E-value=2.7e-24 Score=182.61 Aligned_cols=218 Identities=16% Similarity=0.169 Sum_probs=158.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCC-CcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDP-DNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
++|++|||||+|+||++++++|+++|++|++++|+. +..+........ ...++.++.+|++|.+++.++++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKA--KGVDSFAIQANVADADEVKAMIKEVVSQF 80 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--TTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999988854 333332221111 12578999999999998887765
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|++||+||..... ..+..+..+++|+.++.++++++ ++.+ ..++|++||...+.
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------------- 146 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAV------------- 146 (246)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH-------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcC-------------
Confidence 799999999965421 12233468899999999999987 4445 57999999987663
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+.++...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++..... ........ ....+.
T Consensus 147 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~----~~~~p~--- 209 (246)
T 3osu_A 147 ---------GNPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL-SDELKEQM----LTQIPL--- 209 (246)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS-CHHHHHHH----HTTCTT---
T ss_pred ---------CCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc-CHHHHHHH----HhcCCC---
Confidence 1124568999999999999999885 489999999999998764332 22111111 111111
Q ss_pred CCCccccHHHHHHHHHHhhcCCCC---CCceEEecC
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSSH 256 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~~ 256 (338)
.++.+.+|+|+++++++..... +..+++++.
T Consensus 210 --~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdgG 243 (246)
T 3osu_A 210 --ARFGQDTDIANTVAFLASDKAKYITGQTIHVNGG 243 (246)
T ss_dssp --CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred --CCCcCHHHHHHHHHHHhCccccCCCCCEEEeCCC
Confidence 4688999999999999875433 446777543
No 112
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=99.92 E-value=5.3e-24 Score=185.38 Aligned_cols=224 Identities=14% Similarity=0.075 Sum_probs=159.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC---CccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---GCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~ 80 (338)
.+|+|+||||+|+||.+++++|+++|++|++++|+.+......... ..++.++.+|++|.+++.++++ ++|+
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~ 89 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM-----AGQVEVRELDLQDLSSVRRFADGVSGADV 89 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS-----SSEEEEEECCTTCHHHHHHHHHTCCCEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----cCCeeEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 3689999999999999999999999999999999876554433221 2579999999999999988876 6799
Q ss_pred EEEecccCCC---CCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhcc
Q 040253 81 VFHLATPMDF---ESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVK 157 (338)
Q Consensus 81 vi~~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~ 157 (338)
+||+||.... ...+..+..+++|+.++.++++++.... .+++|++||...+...........+.. +.
T Consensus 90 lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~-~~riv~isS~~~~~~~~~~~~~~~~~~---------~~ 159 (291)
T 3rd5_A 90 LINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRL-TDRVVTVSSMAHWPGRINLEDLNWRSR---------RY 159 (291)
T ss_dssp EEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGE-EEEEEEECCGGGTTCCCCSSCTTCSSS---------CC
T ss_pred EEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH-HhheeEeechhhccCCCCccccccccc---------CC
Confidence 9999996542 2334556889999999999999999887 679999999877642211111111111 22
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHc---C--ccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHH
Q 040253 158 MTGWMYFVSKTLAEQAAWKFAEEN---N--IDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLD 232 (338)
Q Consensus 158 ~p~~~Y~~sK~~~E~~~~~~~~~~---~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 232 (338)
.+...|+.||.+.+.+.+.+++++ | +++++++||.+..+........ .. ..... ....+-..+.+
T Consensus 160 ~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~-~~---~~~~~------~~~~~~~~~~~ 229 (291)
T 3rd5_A 160 SPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRK-LG---DALMS------AATRVVATDAD 229 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC------------------------------CHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchH-HH---HHHHH------HHHHHHhCCHH
Confidence 345689999999999999988775 4 9999999999976653221100 00 00000 00012244699
Q ss_pred HHHHHHHHhhcCCCCCCceE
Q 040253 233 DLCSAHIFLFEHPNAKGRYI 252 (338)
Q Consensus 233 D~a~~~~~~l~~~~~~~~~~ 252 (338)
|+|++++.++..+...|.|+
T Consensus 230 ~~A~~~~~l~~~~~~~G~~~ 249 (291)
T 3rd5_A 230 FGARQTLYAASQDLPGDSFV 249 (291)
T ss_dssp HHHHHHHHHHHSCCCTTCEE
T ss_pred HHHHHHHHHHcCCCCCCcee
Confidence 99999999998866666653
No 113
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=99.92 E-value=1e-24 Score=185.49 Aligned_cols=219 Identities=15% Similarity=0.128 Sum_probs=156.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+++|+||||+|+||++++++|+++|++|++++|+.+............ ...++.++.+|++|.+++.++++
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANK-YGVKAHGVEMNLLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-HCCCEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh-cCCceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 4689999999999999999999999999999999865544332211100 01468999999999998888775
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++ ++.+ .++||++||...+. ..
T Consensus 85 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~~---------- 151 (248)
T 2pnf_A 85 GIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFT--GN---------- 151 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHH--CC----------
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcC--CC----------
Confidence 799999999865421 11233467899999997776655 3345 67999999976553 11
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
.+...|+.+|...+.+.+.+++++ +++++++|||.++++.... ......... ... ...
T Consensus 152 ----------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~~~---~~~-~~~---- 212 (248)
T 2pnf_A 152 ----------VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAV-LSEEIKQKY---KEQ-IPL---- 212 (248)
T ss_dssp ----------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGG-SCHHHHHHH---HHT-CTT----
T ss_pred ----------CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhh-ccHHHHHHH---Hhc-CCC----
Confidence 134589999999999999988764 8999999999999875332 111111111 111 111
Q ss_pred CCccccHHHHHHHHHHhhcCCC---CCCceEEecC
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPN---AKGRYICSSH 256 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~~ 256 (338)
.++++++|+|+++..++.... .+..|++++.
T Consensus 213 -~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 246 (248)
T 2pnf_A 213 -GRFGSPEEVANVVLFLCSELASYITGEVIHVNGG 246 (248)
T ss_dssp -SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -CCccCHHHHHHHHHHHhCchhhcCCCcEEEeCCC
Confidence 458999999999999987532 2446777543
No 114
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=99.92 E-value=1.4e-24 Score=186.51 Aligned_cols=226 Identities=20% Similarity=0.162 Sum_probs=153.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCC-----CCCcEEEEecccCCCCCchhhhCC-
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPK-----ASTHLTLWKADLAEEGNFDEPIRG- 77 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-----~~~~~~~~~~Dl~d~~~~~~~~~~- 77 (338)
.+++|+||||+|+||++++++|+++|++|++++|+.+............. ...++.++.+|++|.+++.++++.
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV 85 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence 35799999999999999999999999999999998655443322111000 014678999999999888777653
Q ss_pred ------c-cEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCC
Q 040253 78 ------C-TGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPV 141 (338)
Q Consensus 78 ------~-d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~ 141 (338)
+ |+|||+||..... ..+..+..+++|+.++.++++++... +...+||++||...+.
T Consensus 86 ~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-------- 157 (264)
T 2pd6_A 86 QACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKV-------- 157 (264)
T ss_dssp HHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH--------
T ss_pred HHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhcc--------
Confidence 4 9999999865421 22334567899999999999987653 1136899999976553
Q ss_pred cCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCC
Q 040253 142 YDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEA 218 (338)
Q Consensus 142 ~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 218 (338)
+..+...|+.+|.+.+.+++.++.+ +|++++++|||.++++..... .... ....... .
T Consensus 158 --------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~---~~~~~~~-~ 218 (264)
T 2pd6_A 158 --------------GNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKV-PQKV---VDKITEM-I 218 (264)
T ss_dssp --------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--------------CTGGG-C
T ss_pred --------------CCCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhc-CHHH---HHHHHHh-C
Confidence 1124568999999999999999887 699999999999999864321 1100 0000000 0
Q ss_pred CCCCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec-CCCCHH
Q 040253 219 HYPIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS-HPATIL 261 (338)
Q Consensus 219 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~-~~~t~~ 261 (338)
.. ..+++++|+|++++.++.... . +..+++++ ..++..
T Consensus 219 ~~-----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~ 260 (264)
T 2pd6_A 219 PM-----GHLGDPEDVADVVAFLASEDSGYITGTSVEVTGGLFMAEN 260 (264)
T ss_dssp TT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC-----
T ss_pred CC-----CCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCceeccc
Confidence 11 358899999999999987532 2 33566644 444433
No 115
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=99.92 E-value=5.9e-24 Score=181.99 Aligned_cols=210 Identities=16% Similarity=0.179 Sum_probs=154.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+.+.......... .++.++.+|++|++++.++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~g 80 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA-----DAARYVHLDVTQPAQWKAAVDTAVTAFG 80 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG-----GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh-----cCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35899999999999999999999999999999998755444322211 357899999999998888776
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|+|||+||..... ..+..+..+++|+.++.++.+++ ++.+ ..++|++||...+. .
T Consensus 81 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~----------- 146 (260)
T 1nff_A 81 GLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLA--G----------- 146 (260)
T ss_dssp CCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--C-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcC--C-----------
Confidence 799999999865421 12234568899999997665554 4445 67999999987763 1
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
..+...|+.+|...+.+.+.++.+ +|++++++|||.++++... ... .... .. .
T Consensus 147 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~--~~~------~~~~--~~-----~ 202 (260)
T 1nff_A 147 ---------TVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD--WVP------EDIF--QT-----A 202 (260)
T ss_dssp ---------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT--TSC------TTCS--CC-----S
T ss_pred ---------CCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc--cch------hhHH--hC-----c
Confidence 113458999999999999998877 4899999999999987532 100 0000 00 1
Q ss_pred CCccccHHHHHHHHHHhhcCCC---CCCceEEecC
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPN---AKGRYICSSH 256 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~~ 256 (338)
..++.+.+|+|++++.++.... .+..+++.+.
T Consensus 203 ~~~~~~~~dvA~~v~~l~s~~~~~~~G~~~~v~gG 237 (260)
T 1nff_A 203 LGRAAEPVEVSNLVVYLASDESSYSTGAEFVVDGG 237 (260)
T ss_dssp SSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCCCCCHHHHHHHHHHHhCccccCCcCCEEEECCC
Confidence 1458899999999999987533 2446677543
No 116
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=99.92 E-value=1.1e-24 Score=185.91 Aligned_cols=218 Identities=16% Similarity=0.130 Sum_probs=137.7
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
|...+|+||||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++
T Consensus 5 ~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (253)
T 3qiv_A 5 MRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVA--DGGTAISVAVDVSDPESAKAMADRTLA 82 (253)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 445678999999999999999999999999999999987665554332211 12578999999999998887765
Q ss_pred ---CccEEEEecccCC--------CCCCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCC
Q 040253 77 ---GCTGVFHLATPMD--------FESKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPV 141 (338)
Q Consensus 77 ---~~d~vi~~a~~~~--------~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~ 141 (338)
++|+|||+||... ....+..+..+++|+.++.++.+++ .+.+ ..++|++||...+.
T Consensus 83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~-------- 153 (253)
T 3qiv_A 83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAWL-------- 153 (253)
T ss_dssp HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC-------------
T ss_pred HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccC--------
Confidence 7999999998632 1112234568899999976666554 4445 57999999987762
Q ss_pred cCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCC
Q 040253 142 YDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEA 218 (338)
Q Consensus 142 ~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 218 (338)
+...|+.+|.+.+.+++.++.++ |+++++++||.++++........... ... ....
T Consensus 154 -----------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---~~~-~~~~ 212 (253)
T 3qiv_A 154 -----------------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMV---DDI-VKGL 212 (253)
T ss_dssp -----------------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC----------------------------
T ss_pred -----------------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHH---HHH-hccC
Confidence 23479999999999999999886 79999999999998754322111110 000 0001
Q ss_pred CCCCCCCCccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 219 HYPIIKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 219 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
. ...+..++|+|++++.++..... +..|++++
T Consensus 213 ~-----~~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg 247 (253)
T 3qiv_A 213 P-----LSRMGTPDDLVGMCLFLLSDEASWITGQIFNVDG 247 (253)
T ss_dssp ------------CCHHHHHHHHHHSGGGTTCCSCEEEC--
T ss_pred C-----CCCCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence 1 13577899999999999975432 45677744
No 117
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.92 E-value=4e-24 Score=183.26 Aligned_cols=219 Identities=18% Similarity=0.119 Sum_probs=158.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|++|||||+|+||++++++|+++|++|++++|+.+............ ...++.++.+|++|++++.++++
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL-GSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-SSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-CCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999999999999876655443322211 11478999999999998887764
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++.++++++... + ..++|++||..... .
T Consensus 88 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~----------- 153 (262)
T 3pk0_A 88 GIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPI--T----------- 153 (262)
T ss_dssp CCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTT--B-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcc--C-----------
Confidence 799999999965421 12233457899999999988877554 4 57999999975431 0
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+.++...|+.+|.+.+.+.+.++.+ +|+++++++||.++++............. ......
T Consensus 154 --------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~-----~~~~p~---- 216 (262)
T 3pk0_A 154 --------GYPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASM-----ARSIPA---- 216 (262)
T ss_dssp --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHH-----HTTSTT----
T ss_pred --------CCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHH-----HhcCCC----
Confidence 1124568999999999999999988 58999999999999874322111111111 111111
Q ss_pred CCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
.++...+|+|+++++++.... . +..+++.+
T Consensus 217 -~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdG 249 (262)
T 3pk0_A 217 -GALGTPEDIGHLAAFLATKEAGYITGQAIAVDG 249 (262)
T ss_dssp -SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -CCCcCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence 458899999999999987543 2 44566744
No 118
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=99.92 E-value=1.2e-23 Score=180.73 Aligned_cols=218 Identities=16% Similarity=0.157 Sum_probs=158.1
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
|...+|+|+||||+|+||++++++|+++|++|++++|+.+.......... .++.++.+|++|.+++.++++
T Consensus 8 ~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 8 RSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG-----NNCVFAPADVTSEKDVQTALALAKG 82 (265)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhC-----CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 33456899999999999999999999999999999998877655433221 478999999999998888775
Q ss_pred ---CccEEEEecccCCCC-----------CCCccchhhhhhhHHHHHHHHHHHhC----------CCccEEEEecCceee
Q 040253 77 ---GCTGVFHLATPMDFE-----------SKDPENEVIRPTINGMVSIMRACKNA----------KTVRRLVFTSSAGTL 132 (338)
Q Consensus 77 ---~~d~vi~~a~~~~~~-----------~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~~~~~v~~Ss~~v~ 132 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++... + ..++|++||...+
T Consensus 83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~ 161 (265)
T 2o23_A 83 KFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAAF 161 (265)
T ss_dssp HHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHHH
T ss_pred HCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEeCChhhc
Confidence 799999999865421 11234567889999999999887653 4 5799999998776
Q ss_pred eccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHh
Q 040253 133 DVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITA 209 (338)
Q Consensus 133 ~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~ 209 (338)
. +..+...|+.+|.+.+.+++.++.++ |+++++++||.+.++..... .......
T Consensus 162 ~----------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~ 218 (265)
T 2o23_A 162 E----------------------GQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL-PEKVCNF 218 (265)
T ss_dssp H----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-----------CH
T ss_pred C----------------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc-CHHHHHH
Confidence 4 11245689999999999999888774 89999999999987753211 1100000
Q ss_pred hhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCCCCC-ceEEec
Q 040253 210 LSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPNAKG-RYICSS 255 (338)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~-~~~~~~ 255 (338)
. ... .+. ...+++.+|+|++++.+++.....| .+.+.+
T Consensus 219 ~---~~~---~~~--~~~~~~~~dva~~~~~l~~~~~~~G~~i~vdg 257 (265)
T 2o23_A 219 L---ASQ---VPF--PSRLGDPAEYAHLVQAIIENPFLNGEVIRLDG 257 (265)
T ss_dssp H---HHT---CSS--SCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred H---HHc---CCC--cCCCCCHHHHHHHHHHHhhcCccCceEEEECC
Confidence 0 011 010 0357899999999999997655444 556643
No 119
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=99.92 E-value=4.9e-24 Score=184.47 Aligned_cols=227 Identities=16% Similarity=0.156 Sum_probs=153.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCC-CcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDP-DNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
++|++|||||+|+||++++++|+++|++|++++|+. +............ ...++.++.+|++|.+++.++++
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 102 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL-SSGTVLHHPADMTKPSEIADMMAMVADRF 102 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT-CSSCEEEECCCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc-cCCcEEEEeCCCCCHHHHHHHHHHHHHHC
Confidence 468999999999999999999999999999999843 3333332222111 12578999999999998887764
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|++||+||..... ..+..+..+++|+.++.++++++ ++.+ ..++|++||...+.
T Consensus 103 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------------- 168 (281)
T 3v2h_A 103 GGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLV------------- 168 (281)
T ss_dssp SSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS-------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCccccc-------------
Confidence 799999999965422 12234567899999999999886 3344 57899999987653
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccC--CCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRN--EAHYP 221 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~--~~~~~ 221 (338)
+......|+.+|.+.+.+.+.++.++ |+++++++||.+.++............. ...... ...+.
T Consensus 169 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 238 (281)
T 3v2h_A 169 ---------ASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTR-GITEEQVINEVML 238 (281)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------
T ss_pred ---------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhc-CCCHHHHHHHHHH
Confidence 11234589999999999999998875 8999999999999875432211110000 000000 00011
Q ss_pred CC-CCCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 222 II-KQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 222 ~~-~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
.. ...++++++|+|++++.++.... .+..+++.+
T Consensus 239 ~~~p~~r~~~~edvA~~v~~L~s~~a~~itG~~i~vdG 276 (281)
T 3v2h_A 239 KGQPTKKFITVEQVASLALYLAGDDAAQITGTHVSMDG 276 (281)
T ss_dssp -CCTTCSCBCHHHHHHHHHHHHSSGGGGCCSCEEEEST
T ss_pred hcCCCCCccCHHHHHHHHHHHcCCCcCCCCCcEEEECC
Confidence 11 12579999999999999997643 244567654
No 120
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=99.92 E-value=7.1e-24 Score=181.25 Aligned_cols=216 Identities=17% Similarity=0.189 Sum_probs=151.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+.+......... ..++.++.+|++|.+++.++++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL-----GAAVRFRNADVTNEADATAALAFAKQEFG 80 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC-----------------CEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-----CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999877654432211 1468899999999998887765
Q ss_pred CccEEEEecccCCCCC---------CCccchhhhhhhHHHHHHHHHHHhC---------CCccEEEEecCceeeeccCCC
Q 040253 77 GCTGVFHLATPMDFES---------KDPENEVIRPTINGMVSIMRACKNA---------KTVRRLVFTSSAGTLDVEEHR 138 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~v~~Ss~~v~~~~~~~ 138 (338)
++|++||+||...... .+..+..+++|+.++.++++++... +...++|++||...+.
T Consensus 81 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~----- 155 (257)
T 3tpc_A 81 HVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFD----- 155 (257)
T ss_dssp CCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHH-----
T ss_pred CCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhcc-----
Confidence 7999999999654211 1234567899999999999887643 1146899999987764
Q ss_pred CCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhccc
Q 040253 139 KPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITR 215 (338)
Q Consensus 139 ~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~ 215 (338)
+..+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++........ .. .....
T Consensus 156 -----------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~-~~---~~~~~ 214 (257)
T 3tpc_A 156 -----------------GQIGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQD-VQ---DALAA 214 (257)
T ss_dssp -----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------------------C
T ss_pred -----------------CCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHH-HH---HHHHh
Confidence 1124568999999999999999888 589999999999988754321110 00 00001
Q ss_pred CCCCCCCCCCCccccHHHHHHHHHHhhcCCCCCC-ceEEec
Q 040253 216 NEAHYPIIKQGQFVHLDDLCSAHIFLFEHPNAKG-RYICSS 255 (338)
Q Consensus 216 ~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~-~~~~~~ 255 (338)
. .+. ..++.+.+|+|++++.+++.....| .+++.+
T Consensus 215 ~---~p~--~~r~~~~~dva~~v~~l~s~~~itG~~i~vdG 250 (257)
T 3tpc_A 215 S---VPF--PPRLGRAEEYAALVKHICENTMLNGEVIRLDG 250 (257)
T ss_dssp C---SSS--SCSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred c---CCC--CCCCCCHHHHHHHHHHHcccCCcCCcEEEECC
Confidence 1 000 0358899999999999998654445 556644
No 121
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=99.92 E-value=2.5e-24 Score=184.37 Aligned_cols=220 Identities=15% Similarity=0.101 Sum_probs=155.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHH-HhcCCCCCCcEEEEecccCCCCCchhhh-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKH-LLELPKASTHLTLWKADLAEEGNFDEPI------- 75 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------- 75 (338)
.+|+||||||+|+||++++++|+++|++|++++|+.+....... +... ..++.++.+|++|++++.+++
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK---GFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999999999999998655443322 2111 247889999999998887776
Q ss_pred -CCccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCC
Q 040253 76 -RGCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 76 -~~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
.++|++||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||...+.
T Consensus 85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------------ 151 (260)
T 2ae2_A 85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGAL------------ 151 (260)
T ss_dssp TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTS------------
T ss_pred CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcc------------
Confidence 4799999999964321 122344678899999999988873 344 67999999987653
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCC-ChhHHHhhhhcccCCCCCC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSM-PPSLITALSPITRNEAHYP 221 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~ 221 (338)
+.++...|+.+|...+.+.+.++.++ |+++++++||.+.++...... ............. ....
T Consensus 152 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~~~~- 219 (260)
T 2ae2_A 152 ----------AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLID-RCAL- 219 (260)
T ss_dssp ----------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHH-TSTT-
T ss_pred ----------CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHh-cCCC-
Confidence 11234589999999999999999886 899999999999876321100 0000000000001 1111
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
.++++.+|+|++++.++.... .+..+++.+
T Consensus 220 ----~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg 252 (260)
T 2ae2_A 220 ----RRMGEPKELAAMVAFLCFPAASYVTGQIIYVDG 252 (260)
T ss_dssp ----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ----CCCCCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence 468999999999999986532 234566644
No 122
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=99.92 E-value=2.9e-24 Score=183.37 Aligned_cols=218 Identities=15% Similarity=0.119 Sum_probs=154.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcE-EEEecccCCCCCchhhh------C
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHL-TLWKADLAEEGNFDEPI------R 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~Dl~d~~~~~~~~------~ 76 (338)
.+++|+||||+|+||++++++|+++|++|++++|+.+..+....... .++ .++.+|++|.+++.+++ .
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG-----AAVAARIVADVTDAEAMTAAAAEAEAVA 84 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----ccceeEEEEecCCHHHHHHHHHHHHhhC
Confidence 35789999999999999999999999999999998665444322211 356 88999999998887776 4
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++ ++.+ .++||++||...+. ..
T Consensus 85 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~~---------- 151 (254)
T 2wsb_A 85 PVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTI--VN---------- 151 (254)
T ss_dssp CCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--CC----------
T ss_pred CCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhcc--CC----------
Confidence 799999999865421 11223467889999977776655 3445 68999999987663 11
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCC-ChhHHHhhhhcccCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSM-PPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+..|...|+.+|.+.|.+++.++.++ |++++++|||.++++...... ..... ...... ...
T Consensus 152 --------~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~---~~~~~~-~~~--- 216 (254)
T 2wsb_A 152 --------RPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELF---ETWLDM-TPM--- 216 (254)
T ss_dssp --------SSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHH---HHHHHT-STT---
T ss_pred --------CCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHH---HHHHhc-CCC---
Confidence 11234689999999999999988875 899999999999987522100 00010 000011 111
Q ss_pred CCCccccHHHHHHHHHHhhcCCC--C-CCceEEecC
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSSH 256 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~~ 256 (338)
.++++++|+|++++.++.... . +..+++.+.
T Consensus 217 --~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 250 (254)
T 2wsb_A 217 --GRCGEPSEIAAAALFLASPAASYVTGAILAVDGG 250 (254)
T ss_dssp --SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --CCCCCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence 468999999999999986532 2 345666543
No 123
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=99.92 E-value=1.2e-23 Score=178.95 Aligned_cols=215 Identities=16% Similarity=0.105 Sum_probs=153.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC---CccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---GCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~ 80 (338)
..++||||||+|+||++++++|+++|++|++++|+.+....+..... .++.++.+|++|.+++.++++ ++|+
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK-----DNYTIEVCNLANKEECSNLISKTSNLDI 87 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----SSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc-----cCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 46899999999999999999999999999999998766555443322 478999999999998888776 6899
Q ss_pred EEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCCCchh
Q 040253 81 VFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLD 151 (338)
Q Consensus 81 vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~ 151 (338)
|||+||.... ...+..+..+++|+.++.++++++.. .+ ..+||++||...+.
T Consensus 88 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------------------ 148 (249)
T 3f9i_A 88 LVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIA------------------ 148 (249)
T ss_dssp EEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--------------------
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhcc------------------
Confidence 9999986431 22344568899999999999887643 33 56999999987764
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCcc
Q 040253 152 FVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQF 228 (338)
Q Consensus 152 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (338)
+..+...|+.+|.+.+.+++.++.++ |+++++++||.+.++............... +. .. .++
T Consensus 149 ----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---~~--~~-----~~~ 214 (249)
T 3f9i_A 149 ----GNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQ---KI--PL-----GTY 214 (249)
T ss_dssp ----CCSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHH---HC--TT-----CSC
T ss_pred ----CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHh---cC--CC-----CCC
Confidence 11245689999999999999988874 899999999999877543221111111111 11 11 468
Q ss_pred ccHHHHHHHHHHhhcCCCC---CCceEEecC
Q 040253 229 VHLDDLCSAHIFLFEHPNA---KGRYICSSH 256 (338)
Q Consensus 229 i~v~D~a~~~~~~l~~~~~---~~~~~~~~~ 256 (338)
.+++|+|++++.++..... +..+++++.
T Consensus 215 ~~~~dva~~~~~l~s~~~~~~tG~~~~vdgG 245 (249)
T 3f9i_A 215 GIPEDVAYAVAFLASNNASYITGQTLHVNGG 245 (249)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence 8999999999999975432 446677553
No 124
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.92 E-value=2.9e-24 Score=181.97 Aligned_cols=206 Identities=18% Similarity=0.214 Sum_probs=154.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------Cc
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------GC 78 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~ 78 (338)
+|+||||||+|+||++++++|+++|++|++++|+.+ . ..+.++.+|++|.+++.++++ ++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~-------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 67 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G-------------EDLIYVEGDVTREEDVRRAVARAQEEAPL 67 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S-------------SSSEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c-------------cceEEEeCCCCCHHHHHHHHHHHHhhCCc
Confidence 589999999999999999999999999999999865 1 356889999999998888876 78
Q ss_pred cEEEEecccCCCCC-----CC----ccchhhhhhhHHHHHHHHHHHhCC---------CccEEEEecCceeeeccCCCCC
Q 040253 79 TGVFHLATPMDFES-----KD----PENEVIRPTINGMVSIMRACKNAK---------TVRRLVFTSSAGTLDVEEHRKP 140 (338)
Q Consensus 79 d~vi~~a~~~~~~~-----~~----~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~v~~Ss~~v~~~~~~~~~ 140 (338)
|+|||+|+...... .+ ..+..++.|+.++.++++++.... ...+||++||...+. .
T Consensus 68 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~--~---- 141 (242)
T 1uay_A 68 FAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFE--G---- 141 (242)
T ss_dssp EEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHH--C----
T ss_pred eEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhcc--C----
Confidence 99999998644211 11 345778999999999999876431 123999999988775 1
Q ss_pred CcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCC
Q 040253 141 VYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNE 217 (338)
Q Consensus 141 ~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~ 217 (338)
..+...|+.+|.+.+.+++.++.+. |++++++|||.++++.... ......... ....
T Consensus 142 ----------------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~---~~~~ 201 (242)
T 1uay_A 142 ----------------QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-LPEKAKASL---AAQV 201 (242)
T ss_dssp ----------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-SCHHHHHHH---HTTC
T ss_pred ----------------CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc-cchhHHHHH---HhhC
Confidence 1245689999999999999988775 8999999999999875332 111111111 1111
Q ss_pred CCCCCCCCCccccHHHHHHHHHHhhcCCCCCC-ceEEec
Q 040253 218 AHYPIIKQGQFVHLDDLCSAHIFLFEHPNAKG-RYICSS 255 (338)
Q Consensus 218 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~-~~~~~~ 255 (338)
.+ ...+++++|+|++++.++......| .+++.+
T Consensus 202 -~~----~~~~~~~~dva~~~~~l~~~~~~~G~~~~v~g 235 (242)
T 1uay_A 202 -PF----PPRLGRPEEYAALVLHILENPMLNGEVVRLDG 235 (242)
T ss_dssp -CS----SCSCCCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred -CC----cccCCCHHHHHHHHHHHhcCCCCCCcEEEEcC
Confidence 11 0358899999999999998744444 667744
No 125
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=99.91 E-value=9.9e-24 Score=179.30 Aligned_cols=215 Identities=15% Similarity=0.125 Sum_probs=158.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|++|||||+|+||++++++|+++|++|++++|+.+.......... .++..+.+|++|.+++.++++
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG-----DNGKGMALNVTNPESIEAVLKAITDEFG 82 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----ccceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 35899999999999999999999999999999998766555443322 357889999999998887765
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++.++.+++.. .+ ..++|++||...+.
T Consensus 83 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~-------------- 147 (248)
T 3op4_A 83 GVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTM-------------- 147 (248)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcC--------------
Confidence 799999999965421 2233456889999999999888743 34 57999999987663
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+..+..... ......... .. ...
T Consensus 148 --------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~--~~--~p~---- 210 (248)
T 3op4_A 148 --------GNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL-NDEQRTATL--AQ--VPA---- 210 (248)
T ss_dssp --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS-CHHHHHHHH--HT--CTT----
T ss_pred --------CCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc-CHHHHHHHH--hc--CCC----
Confidence 11245689999999999999998875 89999999999987653321 111111110 01 111
Q ss_pred CCccccHHHHHHHHHHhhcCCCC---CCceEEecC
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPNA---KGRYICSSH 256 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~~ 256 (338)
.++.+.+|+|+++++++..... +..+++.+.
T Consensus 211 -~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdgG 244 (248)
T 3op4_A 211 -GRLGDPREIASAVAFLASPEAAYITGETLHVNGG 244 (248)
T ss_dssp -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -CCCcCHHHHHHHHHHHcCCccCCccCcEEEECCC
Confidence 4688999999999999875432 445666543
No 126
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=99.91 E-value=6.3e-24 Score=180.98 Aligned_cols=217 Identities=15% Similarity=0.201 Sum_probs=154.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+|+||||+|+||++++++|+++|++|++++|+.+............ .++.++.+|++|.+++.++++
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP---DQIQFFQHDSSDEDGWTKLFDATEKAFG 81 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT---TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc---CceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999999999999865544433222211 478999999999988887765
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCc-cEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTV-RRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~-~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|+|||+||..... ..+..+..+++|+.++..+.+++ ++.+ . ++||++||...+. .
T Consensus 82 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~~iv~isS~~~~~--~---------- 148 (251)
T 1zk4_A 82 PVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKG-LGASIINMSSIEGFV--G---------- 148 (251)
T ss_dssp SCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEEECCGGGTS--C----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCCEEEEeCCchhcc--C----------
Confidence 599999999864321 11223467899999877765554 4445 4 7999999987764 1
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHH-----HcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAE-----ENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYP 221 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~-----~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (338)
..+...|+.+|.+.|.+++.++. ..|++++++|||.++++.... ....... .. .......
T Consensus 149 ----------~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~-~~~~~~~--~~-~~~~~~~- 213 (251)
T 1zk4_A 149 ----------DPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDD-LPGAEEA--MS-QRTKTPM- 213 (251)
T ss_dssp ----------CTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHT-STTHHHH--HT-STTTCTT-
T ss_pred ----------CCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhh-cCchhhh--HH-HhhcCCC-
Confidence 12456899999999999988776 358999999999999875322 1111000 00 0111111
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
.++++.+|+|++++.++.... .+..+++++
T Consensus 214 ----~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 246 (251)
T 1zk4_A 214 ----GHIGEPNDIAYICVYLASNESKFATGSEFVVDG 246 (251)
T ss_dssp ----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ----CCCcCHHHHHHHHHHHcCcccccccCcEEEECC
Confidence 458999999999999997543 234566654
No 127
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=99.91 E-value=9.6e-24 Score=179.41 Aligned_cols=220 Identities=15% Similarity=0.113 Sum_probs=162.0
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
|+..+|+++||||+|+||++++++|+++|++|++++|+.+............ ..++.++.+|++|.+++.++++
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 1 MSLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK--GFKARGLVLNISDIESIQNFFAEIKA 78 (247)
T ss_dssp CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 6777899999999999999999999999999999999876655544332211 2578999999999988877664
Q ss_pred ---CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCC
Q 040253 77 ---GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDE 144 (338)
Q Consensus 77 ---~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e 144 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++.. .+ ..++|++||...+.
T Consensus 79 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~----------- 146 (247)
T 3lyl_A 79 ENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSA----------- 146 (247)
T ss_dssp TTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH-----------
T ss_pred HcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcc-----------
Confidence 589999999965421 2233456889999999998887643 33 46999999987663
Q ss_pred CCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCC
Q 040253 145 TSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYP 221 (338)
Q Consensus 145 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (338)
+.++...|+.+|.+.+.+.+.++.++ |+++++++||.+.++..... ........ ......
T Consensus 147 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~----~~~~~~- 209 (247)
T 3lyl_A 147 -----------GNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL-TDEQKSFI----ATKIPS- 209 (247)
T ss_dssp -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS-CHHHHHHH----HTTSTT-
T ss_pred -----------CCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc-cHHHHHHH----hhcCCC-
Confidence 11245689999999999999988874 89999999999987754332 11111111 111111
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
.++.+++|+|+++..++..... +..+++.+
T Consensus 210 ----~~~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg 242 (247)
T 3lyl_A 210 ----GQIGEPKDIAAAVAFLASEEAKYITGQTLHVNG 242 (247)
T ss_dssp ----CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ----CCCcCHHHHHHHHHHHhCCCcCCccCCEEEECC
Confidence 4689999999999999875432 44667744
No 128
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=99.91 E-value=1.7e-24 Score=183.78 Aligned_cols=217 Identities=18% Similarity=0.194 Sum_probs=151.9
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEE-EcCCCcHHHHHHHhcCCCCCCcEEE-EecccCCCCCchhhhC------
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRAT-VRDPDNKKKVKHLLELPKASTHLTL-WKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~d~~~~~~~~~------ 76 (338)
||+|+||||+|+||++++++|+++|++|+++ +|+.+............ ..++.. +.+|++|.+++.++++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR--GSPLVAVLGANLLEAEAATALVHQAAEVL 78 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT--TCSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc--CCceEEEEeccCCCHHHHHHHHHHHHHhc
Confidence 4799999999999999999999999999998 67755444332211111 135566 8999999988877653
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHH----HHHhCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMR----ACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~----~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|+|||+||..... ..+..+..+++|+.++.++.+ .+++.+ .++||++||...+. .
T Consensus 79 ~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~---------- 145 (245)
T 2ph3_A 79 GGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGIL--G---------- 145 (245)
T ss_dssp TCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--C----------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhcc--C----------
Confidence 799999999865321 122335678999999655554 444555 68999999976553 1
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
..+...|+.+|.+.+.+.+.+++++ |++++++|||.++++.... ......... ... ...
T Consensus 146 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~---~~~-~~~--- 207 (245)
T 2ph3_A 146 ----------NPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTER-LPQEVKEAY---LKQ-IPA--- 207 (245)
T ss_dssp ----------CSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHT-SCHHHHHHH---HHT-CTT---
T ss_pred ----------CCCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhh-cCHHHHHHH---Hhc-CCC---
Confidence 1134589999999999999988875 8999999999998875322 111111111 011 111
Q ss_pred CCCccccHHHHHHHHHHhhcCCC---CCCceEEecC
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSSH 256 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~~ 256 (338)
.++++++|+|++++.++..+. .+..|+++++
T Consensus 208 --~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg 241 (245)
T 2ph3_A 208 --GRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDGG 241 (245)
T ss_dssp --CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred --CCCcCHHHHHHHHHHHhCcccccccCCEEEECCC
Confidence 468899999999999997543 2446777654
No 129
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=99.91 E-value=4.9e-24 Score=182.07 Aligned_cols=218 Identities=16% Similarity=0.133 Sum_probs=158.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|++|||||+|+||++++++|+++|++|++++|+.+..+........ ...++.++.+|++|.+++.++++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQ--AGGKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999987665544332211 12578999999999988877764
Q ss_pred CccEEEEecccCCCC----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 77 GCTGVFHLATPMDFE----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
++|++||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||...+.
T Consensus 89 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--------------- 152 (256)
T 3gaf_A 89 KITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGEN--------------- 152 (256)
T ss_dssp CCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTC---------------
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcC---------------
Confidence 799999999865421 112345678999999999998863 334 57999999987663
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQ 225 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (338)
+..+...|+.+|...+.+.+.++.++ |+++++++||.+.++.............. ......
T Consensus 153 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~----~~~~p~----- 216 (256)
T 3gaf_A 153 -------TNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAM----LKHTPL----- 216 (256)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHH----HTTCTT-----
T ss_pred -------CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHH----HhcCCC-----
Confidence 11245689999999999999999875 89999999999987642111111111111 111111
Q ss_pred CccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 226 GQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 226 ~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
.++.+.+|+|+++++++.... .+..+++.+
T Consensus 217 ~r~~~~~dva~~~~~L~s~~~~~itG~~i~vdg 249 (256)
T 3gaf_A 217 GRLGEAQDIANAALFLCSPAAAWISGQVLTVSG 249 (256)
T ss_dssp SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCHHHHHHHHHHHcCCcccCccCCEEEECC
Confidence 468899999999999997533 244677754
No 130
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=99.91 E-value=5.4e-24 Score=182.78 Aligned_cols=220 Identities=15% Similarity=0.193 Sum_probs=155.9
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcH-HHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNK-KKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
.++|+++||||+|+||.+++++|+++|++|++++|+.... +....... ....++.++.+|++|.+++.++++
T Consensus 5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 82 (264)
T 3i4f_A 5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYK--DVEERLQFVQADVTKKEDLHKIVEEAMSH 82 (264)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTG--GGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHH--hcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999998875432 22222221 112579999999999998887765
Q ss_pred --CccEEEEecccC--CC-----CCCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcC
Q 040253 77 --GCTGVFHLATPM--DF-----ESKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYD 143 (338)
Q Consensus 77 --~~d~vi~~a~~~--~~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~ 143 (338)
++|+|||+||.. .. ...+..+..+++|+.++.++++++ ++.+ ..++|++||.+.++ ..
T Consensus 83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~--~~------ 153 (264)
T 3i4f_A 83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADS--AP------ 153 (264)
T ss_dssp HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGG--CC------
T ss_pred hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcc--cC------
Confidence 799999999932 11 112233567899999999999887 4445 57999999875542 10
Q ss_pred CCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCC
Q 040253 144 ETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHY 220 (338)
Q Consensus 144 e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (338)
+..+...|+.+|.+.+.+++.++.+ .|+++++++||.++++....... ..... .......
T Consensus 154 ------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~-~~~~~p~ 216 (264)
T 3i4f_A 154 ------------GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQ----EARQL-KEHNTPI 216 (264)
T ss_dssp ------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHH----HHHHC--------
T ss_pred ------------CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccH----HHHHH-HhhcCCC
Confidence 1124568999999999999999887 58999999999999876433211 11110 0111111
Q ss_pred CCCCCCccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 221 PIIKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 221 ~~~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
.++.+.+|+|++++.++..... +..+++++
T Consensus 217 -----~r~~~~~dva~~v~~l~s~~~~~itG~~i~vdG 249 (264)
T 3i4f_A 217 -----GRSGTGEDIARTISFLCEDDSDMITGTIIEVTG 249 (264)
T ss_dssp ------CCCCHHHHHHHHHHHHSGGGTTCCSCEEEESC
T ss_pred -----CCCcCHHHHHHHHHHHcCcccCCCCCcEEEEcC
Confidence 4588999999999999975432 44667743
No 131
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=99.91 E-value=1.3e-23 Score=179.41 Aligned_cols=219 Identities=13% Similarity=0.054 Sum_probs=156.5
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCe-EEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCC-CCchhhhC--
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYA-VRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEE-GNFDEPIR-- 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~-- 76 (338)
|...+|+|+||||+|+||.+++++|+++|++ |++++|+... ...+.+..... ..++.++.+|++|. +++.++++
T Consensus 1 m~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~ 78 (254)
T 1sby_A 1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-TALAELKAINP-KVNITFHTYDVTVPVAESKKLLKKI 78 (254)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH-HHHHHHHHHCT-TSEEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH-HHHHHHHHhCC-CceEEEEEEecCCChHHHHHHHHHH
Confidence 6667899999999999999999999999996 9999998643 22232222111 24789999999998 77776654
Q ss_pred -----CccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCC------CccEEEEecCceeeeccCCCCCCcCCC
Q 040253 77 -----GCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAK------TVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 77 -----~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~------~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
++|+|||+||... .+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 79 ~~~~g~id~lv~~Ag~~~---~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~------------ 143 (254)
T 1sby_A 79 FDQLKTVDILINGAGILD---DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFN------------ 143 (254)
T ss_dssp HHHHSCCCEEEECCCCCC---TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS------------
T ss_pred HHhcCCCCEEEECCccCC---HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhcc------------
Confidence 7999999999653 24456889999999999998875421 125899999987763
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhH-HHhhhhcccCCCCCC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSL-ITALSPITRNEAHYP 221 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~~~ 221 (338)
+..+...|+.+|.+.+.+++.++.+ +|+++++++||.+.++.........- ........
T Consensus 144 ----------~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~------- 206 (254)
T 1sby_A 144 ----------AIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL------- 206 (254)
T ss_dssp ----------CCTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH-------
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHH-------
Confidence 1123458999999999999998876 58999999999998864221100000 00000000
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCCCCCceEEec
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPNAKGRYICSS 255 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~ 255 (338)
......+++|+|++++.+++....+..|++.+
T Consensus 207 --~~~~~~~~~dvA~~i~~~~~~~~~G~~~~v~g 238 (254)
T 1sby_A 207 --LSHPTQTSEQCGQNFVKAIEANKNGAIWKLDL 238 (254)
T ss_dssp --TTSCCEEHHHHHHHHHHHHHHCCTTCEEEEET
T ss_pred --hcCCCCCHHHHHHHHHHHHHcCCCCCEEEEeC
Confidence 01234589999999999997655555777754
No 132
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=99.91 E-value=3.1e-24 Score=183.84 Aligned_cols=220 Identities=16% Similarity=0.137 Sum_probs=156.9
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHH-HhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKH-LLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
+|+||||||+|+||++++++|+++|++|++++|+.+....... +... ..++..+.+|++|.+++.++++
T Consensus 14 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 90 (260)
T 2zat_A 14 NKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE---GLSVTGTVCHVGKAEDRERLVAMAVNLHG 90 (260)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999998655443322 2111 2468899999999988877665
Q ss_pred CccEEEEecccCCC------CCCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 GCTGVFHLATPMDF------ESKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 ~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|+|||+||.... ...+..+..+++|+.++.++++++. +.+ ..++|++||...+.
T Consensus 91 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------------- 156 (260)
T 2zat_A 91 GVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYH------------- 156 (260)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS-------------
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcC-------------
Confidence 79999999986421 1112235678999999988888764 445 67999999987774
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCC-ChhHHHhhhhcccCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSM-PPSLITALSPITRNEAHYPI 222 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 222 (338)
+..+...|+.+|...+.+.+.++.++ |+++++++||.+.++...... ........ ......
T Consensus 157 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~----~~~~~~-- 221 (260)
T 2zat_A 157 ---------PFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYM----KESLRI-- 221 (260)
T ss_dssp ---------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHH----HHHHTC--
T ss_pred ---------CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHH----HhcCCC--
Confidence 11245689999999999999998875 899999999999876421100 00000000 000011
Q ss_pred CCCCccccHHHHHHHHHHhhcCCC---CCCceEEec-CCCC
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS-HPAT 259 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~-~~~t 259 (338)
.++.+.+|+|+++++++.... .+..+++++ ...|
T Consensus 222 ---~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 222 ---RRLGNPEDCAGIVSFLCSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp ---SSCBCGGGGHHHHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred ---CCCCCHHHHHHHHHHHcCcccCCccCCEEEECCCcccc
Confidence 468999999999999987543 244677744 4443
No 133
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=99.91 E-value=8e-24 Score=181.57 Aligned_cols=218 Identities=16% Similarity=0.059 Sum_probs=154.3
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|+||||||+|+||++++++|+++|++|++++|+.+........ .. .++.++.+|++|.+++.++++ +
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~---~~~~~~~~D~~d~~~v~~~~~~~~~~~g~ 86 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAG--LE---NGGFAVEVDVTKRASVDAAMQKAIDALGG 86 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--CT---TCCEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--Hh---cCCeEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 47999999999999999999999999999999986544433221 11 257889999999998888775 7
Q ss_pred ccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 78 CTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 78 ~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
+|+|||+||..... ..+..+..+++|+.++.++++++... +...++|++||...+. .
T Consensus 87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~------------ 152 (263)
T 3ak4_A 87 FDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKV--G------------ 152 (263)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS--C------------
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccc--C------------
Confidence 99999999864321 11234567889999999988877542 2147999999986653 1
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCCh---h----HHHhhhhcccCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPP---S----LITALSPITRNEA 218 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~---~----~~~~~~~~~~~~~ 218 (338)
.++...|+.+|...+.+.+.++.++ |++++++|||.++++........ . .......... ..
T Consensus 153 --------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 223 (263)
T 3ak4_A 153 --------APLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVS-LT 223 (263)
T ss_dssp --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHH-TC
T ss_pred --------CCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHh-cC
Confidence 1134589999999999999988875 89999999999988642110000 0 0000000001 11
Q ss_pred CCCCCCCCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 219 HYPIIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 219 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
.. .++++.+|+|++++.++.... .+..+++.+
T Consensus 224 p~-----~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg 258 (263)
T 3ak4_A 224 PL-----GRIEEPEDVADVVVFLASDAARFMTGQGINVTG 258 (263)
T ss_dssp TT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred CC-----CCCcCHHHHHHHHHHHhCccccCCCCCEEEECc
Confidence 11 468999999999999997542 244677754
No 134
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=99.91 E-value=9.6e-24 Score=180.75 Aligned_cols=224 Identities=15% Similarity=0.126 Sum_probs=154.5
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
..+|+||||||+|+||++++++|+++|++|++++|+.+................++.++.+|++|++++.++++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLG 84 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhc
Confidence 34689999999999999999999999999999999865544332221100001268999999999998888775
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|+|||+||..... ..+..+..+++|+.++.++.+++. +.+ ..++|++||...+. .
T Consensus 85 gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~----------- 150 (260)
T 2z1n_A 85 GADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLR--P----------- 150 (260)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--C-----------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcC--C-----------
Confidence 599999999854321 122345678999999977766553 445 67999999987763 1
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCCh-----hHH-Hh-hhhcccCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPP-----SLI-TA-LSPITRNE 217 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~-----~~~-~~-~~~~~~~~ 217 (338)
..+...|+.+|...+.+.+.++.++ |+++++++||.++++........ ... .. .... ...
T Consensus 151 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 220 (260)
T 2z1n_A 151 ---------WQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSM-ASR 220 (260)
T ss_dssp ---------CTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC------------------------C
T ss_pred ---------CCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHH-Hhc
Confidence 1234589999999999999988875 89999999999998764311000 000 00 0000 000
Q ss_pred CCCCCCCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 218 AHYPIIKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 218 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
.. ..++.+.+|+|+++++++.... ..| .+++.+
T Consensus 221 ~p-----~~r~~~~~dva~~v~~l~s~~~~~~tG~~i~vdG 256 (260)
T 2z1n_A 221 IP-----MGRVGKPEELASVVAFLASEKASFITGAVIPVDG 256 (260)
T ss_dssp CT-----TSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred CC-----CCCccCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence 01 1358899999999999987532 234 556644
No 135
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=99.91 E-value=6.2e-24 Score=182.47 Aligned_cols=227 Identities=16% Similarity=0.177 Sum_probs=158.3
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHH-HHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKK-VKHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
..+|+||||||+|+||++++++|+++|++|++++|+...... .+.+.... ..++.++.+|++|.+++.++++
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 89 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEF--GVKTKAYQCDVSNTDIVTKTIQQIDAD 89 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHH--TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhc--CCeeEEEEeeCCCHHHHHHHHHHHHHh
Confidence 346899999999999999999999999999999997655332 22221100 1468999999999988877664
Q ss_pred --CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCC
Q 040253 77 --GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 77 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++... +...+||++||...+..... ..
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~------~~ 163 (265)
T 1h5q_A 90 LGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQS------SL 163 (265)
T ss_dssp SCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEE------ET
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccc------cc
Confidence 489999999865421 11233457899999999999887543 21378999999876531100 00
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPI 222 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (338)
. +..+...|+.+|.+.+.+++.++.++ |++++++|||.++++..... ......... .. ...
T Consensus 164 ~---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~~~---~~-~~~-- 227 (265)
T 1h5q_A 164 N---------GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM-DKKIRDHQA---SN-IPL-- 227 (265)
T ss_dssp T---------EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS-CHHHHHHHH---HT-CTT--
T ss_pred c---------ccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc-chhHHHHHH---hc-Ccc--
Confidence 0 22356789999999999999998774 89999999999998753321 111111111 11 111
Q ss_pred CCCCccccHHHHHHHHHHhhcCCC---CCCceEEecC
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSSH 256 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~~ 256 (338)
.++++.+|+|++++.++.... .+..|++.++
T Consensus 228 ---~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gG 261 (265)
T 1h5q_A 228 ---NRFAQPEEMTGQAILLLSDHATYMTGGEYFIDGG 261 (265)
T ss_dssp ---SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEECTT
T ss_pred ---cCCCCHHHHHHHHHhhccCchhcCcCcEEEecCC
Confidence 358899999999999987543 2446777543
No 136
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.91 E-value=1.4e-23 Score=181.65 Aligned_cols=227 Identities=16% Similarity=0.155 Sum_probs=156.5
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCC----------cHHHHHHHhc-CCCCCCcEEEEecccCCCCCch
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPD----------NKKKVKHLLE-LPKASTHLTLWKADLAEEGNFD 72 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~----------~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~ 72 (338)
.+|+++||||+|+||.+++++|+++|++|++++|+.+ +.+.++.... ......++.++.+|++|.+++.
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 93 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR 93 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 3589999999999999999999999999999998421 2222222111 1111257899999999999888
Q ss_pred hhhC-------CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccC
Q 040253 73 EPIR-------GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEE 136 (338)
Q Consensus 73 ~~~~-------~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~ 136 (338)
++++ ++|++||+||..... ..+..+..+++|+.++.++++++.. .+...++|++||...+.
T Consensus 94 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--- 170 (280)
T 3pgx_A 94 ELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLK--- 170 (280)
T ss_dssp HHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS---
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhcc---
Confidence 7764 799999999965421 2233456788999999999888743 22246899999987663
Q ss_pred CCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhh---
Q 040253 137 HRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITAL--- 210 (338)
Q Consensus 137 ~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~--- 210 (338)
+......|+.+|.+.+.+.+.++.+ +|+++++++||.+.++..... ......
T Consensus 171 -------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~---~~~~~~~~~ 228 (280)
T 3pgx_A 171 -------------------ATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE---AMMEIFARH 228 (280)
T ss_dssp -------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH---HHHHHHHHC
T ss_pred -------------------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh---hhhhhhhcC
Confidence 1123558999999999999999987 589999999999998764321 111101
Q ss_pred hhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEecC
Q 040253 211 SPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSSH 256 (338)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~~ 256 (338)
.............. ..+.+++|+|+++++++.... . +..+++.+.
T Consensus 229 ~~~~~~~~~~~~~~-~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 276 (280)
T 3pgx_A 229 PSFVHSFPPMPVQP-NGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKG 276 (280)
T ss_dssp GGGGGGSCCBTTBC-SSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTT
T ss_pred chhhhhhhhcccCC-CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 00001000111111 258999999999999987543 2 445677554
No 137
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=99.91 E-value=5.1e-24 Score=183.90 Aligned_cols=219 Identities=12% Similarity=0.109 Sum_probs=156.8
Q ss_pred CCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 2 GSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
...+|++|||||+|+||++++++|+++|++|++++|+.+.......... .++..+.+|++|.+++.++++
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~ 98 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIG-----SKAFGVRVDVSSAKDAESMVEKTTAK 98 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----CceEEEEecCCCHHHHHHHHHHHHHH
Confidence 3446899999999999999999999999999999998765554433221 578999999999998887765
Q ss_pred --CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCC
Q 040253 77 --GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 77 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
++|++||+||..... ..+..+..+++|+.++.++.+++. +.+ ..++|++||...+.
T Consensus 99 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------------ 165 (277)
T 4dqx_A 99 WGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATS------------ 165 (277)
T ss_dssp HSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTS------------
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCc------------
Confidence 799999999964321 122344677899999998888774 333 56999999987663
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCC---CChhHHHhhhhcccCCCC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSS---MPPSLITALSPITRNEAH 219 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~ 219 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+.++..... .... ....... .....
T Consensus 166 ----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~-~~~~~ 233 (277)
T 4dqx_A 166 ----------AIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDP-AKLRSDF-NARAV 233 (277)
T ss_dssp ----------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCH-HHHHHHH-HTTST
T ss_pred ----------CCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccch-hHHHHHH-HhcCc
Confidence 11245689999999999999998876 89999999999976531000 0000 0000000 11111
Q ss_pred CCCCCCCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 220 YPIIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 220 ~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
. .++.+.+|+|+++++++.... .+..+++.+
T Consensus 234 ~-----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 267 (277)
T 4dqx_A 234 M-----DRMGTAEEIAEAMLFLASDRSRFATGSILTVDG 267 (277)
T ss_dssp T-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred c-----cCCcCHHHHHHHHHHHhCCccCCCcCCEEEECC
Confidence 1 458899999999999987543 244667744
No 138
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=99.91 E-value=9.7e-24 Score=180.87 Aligned_cols=222 Identities=17% Similarity=0.145 Sum_probs=150.9
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
|...+|++|||||+|+||++++++|+++|++|++++|+.+....+..... .++.++.+|++|.+++.++++
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIG-----DAALAVAADISKEADVDAAVEAALS 79 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhC-----CceEEEEecCCCHHHHHHHHHHHHH
Confidence 44557899999999999999999999999999999998776555543322 578999999999998877765
Q ss_pred ---CccEEEEecccCCC-C-----CCCccchhhhhhhHHHHHHHHHHHhCC-------CccEEEEecCceeeeccCCCCC
Q 040253 77 ---GCTGVFHLATPMDF-E-----SKDPENEVIRPTINGMVSIMRACKNAK-------TVRRLVFTSSAGTLDVEEHRKP 140 (338)
Q Consensus 77 ---~~d~vi~~a~~~~~-~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-------~~~~~v~~Ss~~v~~~~~~~~~ 140 (338)
++|++||+||.... . ..+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 80 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~------- 152 (261)
T 3n74_A 80 KFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGR------- 152 (261)
T ss_dssp HHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTS-------
T ss_pred hcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcC-------
Confidence 78999999986541 1 122334678899999988888764331 134799999976653
Q ss_pred CcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCC
Q 040253 141 VYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNE 217 (338)
Q Consensus 141 ~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~ 217 (338)
+.+....|+.+|.+.+.+.+.++.++ |+++++++||.+.++................. ...
T Consensus 153 ---------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~-~~~ 216 (261)
T 3n74_A 153 ---------------PRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKF-RDS 216 (261)
T ss_dssp ---------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC--------------------------
T ss_pred ---------------CCCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHH-hhc
Confidence 11234579999999999999999884 89999999999987754321110000000000 000
Q ss_pred CCCCCCCCCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 218 AHYPIIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 218 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
. ...++++.+|+|+++++++.... .+..+++.+
T Consensus 217 ~-----~~~~~~~~~dva~~~~~l~s~~~~~itG~~i~vdg 252 (261)
T 3n74_A 217 I-----PMGRLLKPDDLAEAAAFLCSPQASMITGVALDVDG 252 (261)
T ss_dssp C-----TTSSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred C-----CcCCCcCHHHHHHHHHHHcCCcccCcCCcEEEecC
Confidence 1 11468999999999999996433 244567744
No 139
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=99.91 E-value=1.9e-23 Score=181.64 Aligned_cols=219 Identities=20% Similarity=0.151 Sum_probs=158.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+||||||+|+||.+++++|+++|++|++++|+.+............. ..++.++.+|++|.+++.++++
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELG-AGNVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSS-SSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-CCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 46899999999999999999999999999999998877665544332211 1478999999999988777654
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||...+. .
T Consensus 119 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~--~----------- 184 (293)
T 3rih_A 119 ALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPV--T----------- 184 (293)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTT--B-----------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhcc--C-----------
Confidence 689999999965421 122335678999999999998873 444 57999999976431 0
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
...+...|+.+|...+.+.+.++.++ |+++++++||.++++...... .... ..... ....
T Consensus 185 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~-~~~~---~~~~~-~~p~---- 247 (293)
T 3rih_A 185 --------GYPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG-EEYI---SGMAR-SIPM---- 247 (293)
T ss_dssp --------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC-HHHH---HHHHT-TSTT----
T ss_pred --------CCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc-HHHH---HHHHh-cCCC----
Confidence 11245689999999999999998874 899999999999987532111 1111 11111 1111
Q ss_pred CCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
..+...+|+|+++++++.... . +..+++.+
T Consensus 248 -~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG 280 (293)
T 3rih_A 248 -GMLGSPVDIGHLAAFLATDEAGYITGQAIVVDG 280 (293)
T ss_dssp -SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -CCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 357789999999999986533 2 44566644
No 140
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=99.91 E-value=1.9e-23 Score=177.18 Aligned_cols=198 Identities=13% Similarity=0.146 Sum_probs=151.6
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC-------eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY-------AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR- 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~- 76 (338)
+|+||||||+|+||++++++|+++|+ +|++++|+.+....+...... ...++.++.+|++|++++.++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~ 79 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRA--EGALTDTITADISDMADVRRLTTH 79 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHT--TTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHc--cCCeeeEEEecCCCHHHHHHHHHH
Confidence 57899999999999999999999999 999999986554444332211 12578999999999988887765
Q ss_pred ------CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCC
Q 040253 77 ------GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPV 141 (338)
Q Consensus 77 ------~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~ 141 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++.. .+ ..++|++||...+.
T Consensus 80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~-------- 150 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATK-------- 150 (244)
T ss_dssp HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--------
T ss_pred HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcC--------
Confidence 699999999865421 1223456789999999999888743 34 57999999987764
Q ss_pred cCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCC
Q 040253 142 YDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEA 218 (338)
Q Consensus 142 ~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 218 (338)
+..+...|+.+|.+.+.+++.++.+ +|++++++|||.++++..... . ...
T Consensus 151 --------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~-----------~~~- 203 (244)
T 2bd0_A 151 --------------AFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV-D-----------DEM- 203 (244)
T ss_dssp --------------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC-C-----------STT-
T ss_pred --------------CCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhc-c-----------ccc-
Confidence 1124568999999999999888765 489999999999998864321 0 000
Q ss_pred CCCCCCCCccccHHHHHHHHHHhhcCCC
Q 040253 219 HYPIIKQGQFVHLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 219 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 246 (338)
...+++.+|+|++++.++..+.
T Consensus 204 ------~~~~~~~~dva~~~~~l~~~~~ 225 (244)
T 2bd0_A 204 ------QALMMMPEDIAAPVVQAYLQPS 225 (244)
T ss_dssp ------GGGSBCHHHHHHHHHHHHTSCT
T ss_pred ------cccCCCHHHHHHHHHHHHhCCc
Confidence 1368999999999999998654
No 141
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=99.91 E-value=1.6e-23 Score=178.33 Aligned_cols=218 Identities=14% Similarity=0.131 Sum_probs=146.5
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
|...+|+++||||+|+||++++++|+++|++|++++|+.+.. . .++..+.+|++|++++.++++
T Consensus 3 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-------~-----~~~~~~~~D~~d~~~~~~~~~~~~~ 70 (250)
T 2fwm_X 3 MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-------Q-----YPFATEVMDVADAAQVAQVCQRLLA 70 (250)
T ss_dssp CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS-------C-----CSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh-------c-----CCceEEEcCCCCHHHHHHHHHHHHH
Confidence 545578999999999999999999999999999999986521 0 137889999999998887775
Q ss_pred ---CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCC
Q 040253 77 ---GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDE 144 (338)
Q Consensus 77 ---~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e 144 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++ ++.+ ..++|++||...+.
T Consensus 71 ~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~----------- 138 (250)
T 2fwm_X 71 ETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHT----------- 138 (250)
T ss_dssp HCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS-----------
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCC-----------
Confidence 799999999864421 12234568899999999998887 3444 57999999987663
Q ss_pred CCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhh-hcccCCCCC
Q 040253 145 TSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALS-PITRNEAHY 220 (338)
Q Consensus 145 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~-~~~~~~~~~ 220 (338)
+..+...|+.+|...+.+.+.++.+. |+++++++||.++++......... .... ........+
T Consensus 139 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~ 205 (250)
T 2fwm_X 139 -----------PRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSD--DAEEQRIRGFGEQF 205 (250)
T ss_dssp -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------------------------
T ss_pred -----------CCCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccCh--hHHHHHHhhhhhcc
Confidence 11245689999999999999998874 899999999999987533211000 0000 000000000
Q ss_pred C-CCCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 221 P-IIKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 221 ~-~~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
. .....++.+.+|+|+++++++.... ..| .+.+.+
T Consensus 206 ~~~~p~~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG 244 (250)
T 2fwm_X 206 KLGIPLGKIARPQEIANTILFLASDLASHITLQDIVVDG 244 (250)
T ss_dssp ----------CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred cccCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 0 0001358899999999999987643 234 556644
No 142
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=99.91 E-value=2.6e-23 Score=177.71 Aligned_cols=220 Identities=15% Similarity=0.072 Sum_probs=156.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQ--FPGQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--STTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999987765555443322 12578999999999998887764
Q ss_pred CccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHH-----HhCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 GCTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRAC-----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~-----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|++||+||.... ...+..+..+++|+.++.++.+++ ++.+ ..++|++||...+.
T Consensus 83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------------- 148 (257)
T 3imf_A 83 RIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGI-KGNIINMVATYAWD------------- 148 (257)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC-CCEEEEECCGGGGS-------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCC-CcEEEEECchhhcc-------------
Confidence 78999999985432 122334567899999999998887 3333 57999999987663
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH----cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE----NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPI 222 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (338)
+......|+.+|...+.+.+.++.+ +|+++++++||.+.++......... ....... ......
T Consensus 149 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~-~~~~~~~-~~~~p~-- 215 (257)
T 3imf_A 149 ---------AGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWIS-EEMAKRT-IQSVPL-- 215 (257)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------CCSHHH-HTTSTT--
T ss_pred ---------CCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccC-HHHHHHH-HhcCCC--
Confidence 1123458999999999988888754 3899999999999887533211000 0000000 011111
Q ss_pred CCCCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
.++...+|+|+++++++.... .+..+++.+
T Consensus 216 ---~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 248 (257)
T 3imf_A 216 ---GRLGTPEEIAGLAYYLCSDEAAYINGTCMTMDG 248 (257)
T ss_dssp ---CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ---CCCcCHHHHHHHHHHHcCchhcCccCCEEEECC
Confidence 468899999999999997543 244566644
No 143
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=99.91 E-value=3e-23 Score=179.72 Aligned_cols=224 Identities=16% Similarity=0.164 Sum_probs=157.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc---------HHHHHHHhc-CCCCCCcEEEEecccCCCCCchh
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN---------KKKVKHLLE-LPKASTHLTLWKADLAEEGNFDE 73 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~ 73 (338)
.+|++|||||+|+||++++++|+++|++|++++|++.. .+.+..... ......++.++.+|++|.+++.+
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 88 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 36899999999999999999999999999999997431 222222111 11112578999999999998887
Q ss_pred hhC-------CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCC
Q 040253 74 PIR-------GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEH 137 (338)
Q Consensus 74 ~~~-------~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~ 137 (338)
+++ ++|++||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||...+.
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~---- 163 (281)
T 3s55_A 89 FVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGHS---- 163 (281)
T ss_dssp HHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGS----
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcC----
Confidence 765 799999999965421 122345678899999999998853 334 57999999987663
Q ss_pred CCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCC-----Ch-----
Q 040253 138 RKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSM-----PP----- 204 (338)
Q Consensus 138 ~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~-----~~----- 204 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.++++...... ..
T Consensus 164 ------------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~ 225 (281)
T 3s55_A 164 ------------------ANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKP 225 (281)
T ss_dssp ------------------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------C
T ss_pred ------------------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhcccccccccc
Confidence 11245689999999999999999874 899999999999998643210 00
Q ss_pred hHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 205 SLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
.............. ...++.+++|+|+++++++..... +..+++.+
T Consensus 226 ~~~~~~~~~~~~~~-----~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg 274 (281)
T 3s55_A 226 TLKDVESVFASLHL-----QYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDA 274 (281)
T ss_dssp CHHHHHHHHHHHCS-----SSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred chhHHHHHHHhhhc-----cCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence 00000000000000 014689999999999999975432 44677754
No 144
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=99.91 E-value=3.1e-23 Score=176.37 Aligned_cols=216 Identities=16% Similarity=0.127 Sum_probs=149.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCC-CcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDP-DNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI------- 75 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------- 75 (338)
.+|+|+||||+|+||++++++|+++|++|++++|++ +.... .+... ..++.++.+|++|++++.+++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~--~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA--AIRNL---GRRVLTVKCDVSQPGDVEAFGKQVISTF 80 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH--HHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH--HHHhc---CCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 358999999999999999999999999999999987 43322 11111 146899999999998887765
Q ss_pred CCccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHH----HHhCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 76 RGCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRA----CKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 76 ~~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
.++|+|||+||..... ..+..+..+++|+.++.++.++ +++.+ ..++|++||...+.
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------------- 146 (249)
T 2ew8_A 81 GRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWL------------- 146 (249)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGS-------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcc-------------
Confidence 3799999999865421 1223446789999998888777 44445 57999999987764
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+.++...|+.+|...+.+.+.++.++ |+++++++||.+.++.............. ... . .
T Consensus 147 ---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~----~~~-~---~ 209 (249)
T 2ew8_A 147 ---------KIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVL----PNM-L---Q 209 (249)
T ss_dssp ---------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------CT-T---S
T ss_pred ---------CCCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHH----HHh-h---C
Confidence 11245689999999999999998874 89999999999988753211100000000 000 0 0
Q ss_pred CCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
...++.+.+|+|+++++++.... ..| .+++.+
T Consensus 210 ~~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdG 244 (249)
T 2ew8_A 210 AIPRLQVPLDLTGAAAFLASDDASFITGQTLAVDG 244 (249)
T ss_dssp SSCSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESS
T ss_pred ccCCCCCHHHHHHHHHHHcCcccCCCCCcEEEECC
Confidence 11458899999999999997532 234 556644
No 145
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=99.91 E-value=2.2e-23 Score=180.87 Aligned_cols=218 Identities=17% Similarity=0.156 Sum_probs=153.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+|+||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKS--FGYESSGYAGDVSKKEEISEVINKILTEHK 120 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHT--TTCCEEEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHh--cCCceeEEECCCCCHHHHHHHHHHHHHhcC
Confidence 358999999999999999999999999999988876554433222211 12468899999999998887763
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++. +.+ .++||++||...+. .
T Consensus 121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~--~----------- 186 (285)
T 2c07_A 121 NVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLT--G----------- 186 (285)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--C-----------
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcc--C-----------
Confidence 689999999865421 122345678999999888777664 344 57999999987653 1
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
..+...|+.+|.+.+.+++.++.+. |+++++++||.+.++.... ......... .. ....
T Consensus 187 ---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~---~~-~~~~---- 248 (285)
T 2c07_A 187 ---------NVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDK-ISEQIKKNI---IS-NIPA---- 248 (285)
T ss_dssp ---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC------CCHHHHHHH---HT-TCTT----
T ss_pred ---------CCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhh-cCHHHHHHH---Hh-hCCC----
Confidence 1134589999999999999988775 8999999999998875332 111111111 01 1111
Q ss_pred CCccccHHHHHHHHHHhhcCCC---CCCceEEecC
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPN---AKGRYICSSH 256 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~~ 256 (338)
.++++++|+|++++.++.... .+..++++++
T Consensus 249 -~~~~~~~dvA~~~~~l~~~~~~~~~G~~i~v~gG 282 (285)
T 2c07_A 249 -GRMGTPEEVANLACFLSSDKSGYINGRVFVIDGG 282 (285)
T ss_dssp -SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -CCCCCHHHHHHHHHHHhCCCcCCCCCCEEEeCCC
Confidence 358999999999999987543 2445666543
No 146
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=99.91 E-value=3.5e-23 Score=178.52 Aligned_cols=218 Identities=16% Similarity=0.141 Sum_probs=152.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh--------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI-------- 75 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------- 75 (338)
.+|+++||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|++++.+++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWRE--KGLNVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 458999999999999999999999999999999986554433221111 1246889999999998887766
Q ss_pred CCccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 76 RGCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 76 ~~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
.++|++||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||...+. .
T Consensus 98 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~--~---------- 164 (273)
T 1ae1_A 98 GKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFS--A---------- 164 (273)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTS--C----------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcC--C----------
Confidence 4799999999864321 122344677899999999988773 334 57999999987764 1
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCC-----hhHHHhhhhcccCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMP-----PSLITALSPITRNEA 218 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~ 218 (338)
.++...|+.+|.+.+.+.+.++.++ |+++++++||.++++....... ........ ...
T Consensus 165 ----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~-- 230 (273)
T 1ae1_A 165 ----------LPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFI--VKT-- 230 (273)
T ss_dssp ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHH--HHS--
T ss_pred ----------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHH--hcC--
Confidence 1234589999999999999998875 8999999999999886332111 00100000 011
Q ss_pred CCCCCCCCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 219 HYPIIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 219 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
.. .++.+.+|+|++++.++.... .+..+++.+
T Consensus 231 p~-----~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG 265 (273)
T 1ae1_A 231 PM-----GRAGKPQEVSALIAFLCFPAASYITGQIIWADG 265 (273)
T ss_dssp TT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CC-----CCCcCHHHHHHHHHHHhCccccCcCCCEEEECC
Confidence 11 358899999999999986432 234566644
No 147
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=99.91 E-value=1.7e-23 Score=179.75 Aligned_cols=218 Identities=14% Similarity=0.085 Sum_probs=155.6
Q ss_pred CcEEEEeCCc--hhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 5 AETVCVTGAS--GFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 5 ~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
+|+||||||+ |+||++++++|+++|++|++++|+....+..+.+.... ++..++.+|++|++++.++++
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL---GSDIVLQCDVAEDASIDTMFAELGKVW 85 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhc---CCcEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4789999999 99999999999999999999999874333333332211 234788999999988877664
Q ss_pred -CccEEEEecccCCC----------CCCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCC
Q 040253 77 -GCTGVFHLATPMDF----------ESKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDE 144 (338)
Q Consensus 77 -~~d~vi~~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e 144 (338)
++|+|||+||.... ...+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 86 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----------- 154 (265)
T 1qsg_A 86 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAER----------- 154 (265)
T ss_dssp SSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-----------
T ss_pred CCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhcc-----------
Confidence 68999999996432 2223345688999999999999987652 125899999976653
Q ss_pred CCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCC
Q 040253 145 TSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYP 221 (338)
Q Consensus 145 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (338)
+.++...|+.+|.+.+.+.+.++.++ |+++++++||.++++....... ........... ..+
T Consensus 155 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~-~p~- 219 (265)
T 1qsg_A 155 -----------AIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKD--FRKMLAHCEAV-TPI- 219 (265)
T ss_dssp -----------BCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTT--HHHHHHHHHHH-STT-
T ss_pred -----------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccc--cHHHHHHHHhc-CCC-
Confidence 11234589999999999999998875 8999999999999875322111 01111100011 111
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
..+.+.+|+|+++++++..... +..+++.+
T Consensus 220 ----~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg 252 (265)
T 1qsg_A 220 ----RRTVTIEDVGNSAAFLCSDLSAGISGEVVHVDG 252 (265)
T ss_dssp ----SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred ----CCCCCHHHHHHHHHHHhCchhcCccCCEEEECC
Confidence 3578999999999999875332 34567754
No 148
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=99.91 E-value=7e-24 Score=179.90 Aligned_cols=217 Identities=18% Similarity=0.186 Sum_probs=153.8
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEE-EcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRAT-VRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
+|+|+||||+|+||++++++|+++|++|+++ .|+.+........... ...++.++.+|++|.+++.++++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEA--YGGQAITFGGDVSKEADVEAMMKTAIDAWG 78 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--HTCEEEEEECCTTSHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh--cCCcEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 3789999999999999999999999999985 6765444333221110 11468899999999998888775
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++... + ..+||++||...+. .
T Consensus 79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~--~----------- 144 (244)
T 1edo_A 79 TIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLI--G----------- 144 (244)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--C-----------
T ss_pred CCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcC--C-----------
Confidence 699999999865421 11233467899999999998887543 4 57999999986653 1
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
..+...|+.+|...+.+.+.+++++ |++++++|||.++++..... ....... .... ...
T Consensus 145 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-~~~~~~~---~~~~-~~~---- 206 (244)
T 1edo_A 145 ---------NIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL-GEDMEKK---ILGT-IPL---- 206 (244)
T ss_dssp ---------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT-CHHHHHH---HHTS-CTT----
T ss_pred ---------CCCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc-ChHHHHH---Hhhc-CCC----
Confidence 1134589999999999999888774 89999999999988743221 1111111 1111 111
Q ss_pred CCccccHHHHHHHHHHhhcCCC----CCCceEEecC
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPN----AKGRYICSSH 256 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~----~~~~~~~~~~ 256 (338)
.++++.+|+|++++.++.++. .+..|++++.
T Consensus 207 -~~~~~~~dva~~~~~l~~~~~~~~~~G~~~~v~gG 241 (244)
T 1edo_A 207 -GRTGQPENVAGLVEFLALSPAASYITGQAFTIDGG 241 (244)
T ss_dssp -CSCBCHHHHHHHHHHHHHCSGGGGCCSCEEEESTT
T ss_pred -CCCCCHHHHHHHHHHHhCCCccCCcCCCEEEeCCC
Confidence 458899999999999984432 2445677543
No 149
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=99.91 E-value=1.6e-23 Score=181.15 Aligned_cols=234 Identities=15% Similarity=0.139 Sum_probs=158.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCC---------cHHHHHHHhc-CCCCCCcEEEEecccCCCCCchh
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPD---------NKKKVKHLLE-LPKASTHLTLWKADLAEEGNFDE 73 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~ 73 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+.. ..+.+..... ......++.++.+|++|.+++.+
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 91 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA 91 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 3689999999999999999999999999999998732 1222221111 01112578999999999998888
Q ss_pred hhC-------CccEEEEecccCCCC-CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCC
Q 040253 74 PIR-------GCTGVFHLATPMDFE-SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPV 141 (338)
Q Consensus 74 ~~~-------~~d~vi~~a~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~ 141 (338)
+++ ++|++||+||..... ..+..+..+++|+.++.++++++... +...++|++||...+. .. .
T Consensus 92 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--~~-~-- 166 (278)
T 3sx2_A 92 ALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLA--GV-G-- 166 (278)
T ss_dssp HHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS--CC-C--
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcC--CC-c--
Confidence 775 799999999975432 22345678999999999999886432 2146899999987653 11 0
Q ss_pred cCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCC
Q 040253 142 YDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEA 218 (338)
Q Consensus 142 ~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 218 (338)
. +.++...|+.+|.+.+.+.+.++.++ |+++++++||.+.++......................
T Consensus 167 ----~---------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~ 233 (278)
T 3sx2_A 167 ----S---------ADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPG 233 (278)
T ss_dssp ----C---------SSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--C
T ss_pred ----c---------CCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhh
Confidence 0 11234589999999999999998875 6999999999999876432111111100111111111
Q ss_pred CCCCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 219 HYPIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 219 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
.+......++++.+|+|+++++++.... . +..+++.+
T Consensus 234 ~~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG 273 (278)
T 3sx2_A 234 AMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDA 273 (278)
T ss_dssp TTSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred hhhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECC
Confidence 1111111578999999999999986543 2 44566654
No 150
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=99.91 E-value=1.4e-23 Score=179.76 Aligned_cols=219 Identities=13% Similarity=0.099 Sum_probs=156.4
Q ss_pred CCcEEEEeCCc--hhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 4 IAETVCVTGAS--GFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 4 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
.+|+||||||+ |+||++++++|+++|++|++++|+.+.....+.+.... +++.++.+|++|++++.++++
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEAL---GGALLFRADVTQDEELDALFAGVKEA 83 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHT---TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHHHHHH
Confidence 46899999999 99999999999999999999999875333333332211 247889999999998887765
Q ss_pred --CccEEEEecccCCC---------CCCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCC
Q 040253 77 --GCTGVFHLATPMDF---------ESKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDE 144 (338)
Q Consensus 77 --~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e 144 (338)
++|+|||+||.... ...+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 84 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~----------- 152 (261)
T 2wyu_A 84 FGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEK----------- 152 (261)
T ss_dssp HSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTS-----------
T ss_pred cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccC-----------
Confidence 78999999986431 1223345688999999999999987652 125899999976653
Q ss_pred CCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCC
Q 040253 145 TSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYP 221 (338)
Q Consensus 145 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (338)
+..+...|+.+|...+.+.+.++.++ |+++++++||.++++....... ........... ...
T Consensus 153 -----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~-~p~- 217 (261)
T 2wyu_A 153 -----------VVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPG--FTKMYDRVAQT-APL- 217 (261)
T ss_dssp -----------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTT--HHHHHHHHHHH-STT-
T ss_pred -----------CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccc--cHHHHHHHHhc-CCC-
Confidence 11234589999999999999998876 8999999999999875322111 00101100011 111
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
.++.+++|+|+++++++.... .+..+++.+
T Consensus 218 ----~~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdg 250 (261)
T 2wyu_A 218 ----RRNITQEEVGNLGLFLLSPLASGITGEVVYVDA 250 (261)
T ss_dssp ----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ----CCCCCHHHHHHHHHHHcChhhcCCCCCEEEECC
Confidence 357899999999999986432 244667754
No 151
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=99.91 E-value=1.5e-23 Score=180.55 Aligned_cols=217 Identities=17% Similarity=0.112 Sum_probs=155.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------C
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------G 77 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~ 77 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+.......+.+... ..++.++.+|++|.+++.++.+ +
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~ 106 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADG---GGSAEAVVADLADLEGAANVAEELAATRR 106 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTT---TCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhc---CCcEEEEEecCCCHHHHHHHHHHHHhcCC
Confidence 368999999999999999999999999999999764333333333221 2578999999999988776643 7
Q ss_pred ccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 78 CTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 78 ~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
+|++||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||...+.
T Consensus 107 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~--------------- 170 (273)
T 3uf0_A 107 VDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQ--------------- 170 (273)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS---------------
T ss_pred CcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcC---------------
Confidence 99999999965421 122345688999999999988763 344 57999999987663
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCC-ChhHHHhhhhcccCCCCCCCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSM-PPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+..+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++...... ........ .... ..
T Consensus 171 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~--~~~~--p~---- 235 (273)
T 3uf0_A 171 -------GGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEI--TARI--PA---- 235 (273)
T ss_dssp -------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHH--HHHS--TT----
T ss_pred -------CCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHH--HhcC--CC----
Confidence 1124568999999999999999988 5899999999999886532100 00000000 0011 11
Q ss_pred CCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
.++.+.+|+|+++++++.... .+..+++.+
T Consensus 236 -~r~~~pedva~~v~~L~s~~a~~itG~~i~vdG 268 (273)
T 3uf0_A 236 -GRWATPEDMVGPAVFLASDAASYVHGQVLAVDG 268 (273)
T ss_dssp -SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence 468899999999999987533 244567754
No 152
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=99.91 E-value=4e-23 Score=176.35 Aligned_cols=219 Identities=14% Similarity=0.126 Sum_probs=154.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+||||||+|+||.+++++|+++|++|++++|+.+ ....+.+... ..++.++.+|++|.+++.++++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~l~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 78 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP-APALAEIARH---GVKAVHHPADLSDVAQIEALFALAEREFG 78 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHTT---SCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch-HHHHHHHHhc---CCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999876 2222333221 2468899999999998888776
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|+|||+||..... ..+..+..+++|+.++.++.+++ ++.+ ..++|++||...+. .
T Consensus 79 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~----------- 144 (255)
T 2q2v_A 79 GVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLV--G----------- 144 (255)
T ss_dssp SCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS--C-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhcc--C-----------
Confidence 799999999864321 12234567899999777766554 5555 68999999987663 1
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHh---h----hhcccCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITA---L----SPITRNE 217 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~---~----~~~~~~~ 217 (338)
..+...|+.+|...+.+.+.++.++ |+++++++||.++++.... ........ . .......
T Consensus 145 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 214 (255)
T 2q2v_A 145 ---------STGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQK-QIDDRAANGGDPLQAQHDLLAEK 214 (255)
T ss_dssp ---------CTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHH-HHHHHHHHTCCHHHHHHHHHTTT
T ss_pred ---------CCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhh-hcccccccccchHHHHHHHHhcc
Confidence 1134589999999999999999885 7999999999998874211 00000000 0 0000111
Q ss_pred CCCCCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 218 AHYPIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 218 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
.. ..++++++|+|+++++++.... . +..+++.+
T Consensus 215 ~p-----~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg 250 (255)
T 2q2v_A 215 QP-----SLAFVTPEHLGELVLFLCSEAGSQVRGAAWNVDG 250 (255)
T ss_dssp CT-----TCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred CC-----CCCCcCHHHHHHHHHHHhCCccCCCCCCEEEECC
Confidence 11 1468999999999999987543 2 44567654
No 153
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=99.91 E-value=1.3e-23 Score=180.24 Aligned_cols=215 Identities=15% Similarity=0.119 Sum_probs=151.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+.+......... ..++.++.+|++|.+++.++++
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL-----GKDVFVFSANLSDRKSIKQLAEVAEREME 100 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----CSSEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999999999866554443222 1578999999999998887764
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++.++.+++ ++.+ ..++|++||...+.
T Consensus 101 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~-------------- 165 (266)
T 3grp_A 101 GIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVV-------------- 165 (266)
T ss_dssp SCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC------------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcC--------------
Confidence 799999999965421 11234567889999977776655 3344 57999999987663
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+.++..... ........ ......
T Consensus 166 --------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~-~~~~~~~~----~~~~p~---- 228 (266)
T 3grp_A 166 --------GNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL-NEKQKEAI----MAMIPM---- 228 (266)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC-CHHHHHHH----HTTCTT----
T ss_pred --------CCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc-CHHHHHHH----HhcCCC----
Confidence 11234589999999999999998875 89999999999987642211 11111111 111111
Q ss_pred CCccccHHHHHHHHHHhhcCCCC---CCceEEecC
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPNA---KGRYICSSH 256 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~~ 256 (338)
.++.+.+|+|+++++++..... +..+++.+.
T Consensus 229 -~r~~~~edvA~~v~~L~s~~~~~itG~~i~vdGG 262 (266)
T 3grp_A 229 -KRMGIGEEIAFATVYLASDEAAYLTGQTLHINGG 262 (266)
T ss_dssp -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 4688999999999999875432 445666543
No 154
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=99.91 E-value=1.6e-23 Score=176.63 Aligned_cols=196 Identities=20% Similarity=0.187 Sum_probs=139.6
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
|+.++|+|+||||+|+||++++++|+++|++|++++|+.+....+.... .++.++.+|++|.+++.++++
T Consensus 1 M~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (234)
T 2ehd_A 1 MEGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL------EGALPLPGDVREEGDWARAVAAMEE 74 (234)
T ss_dssp ---CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS------TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------hhceEEEecCCCHHHHHHHHHHHHH
Confidence 7777789999999999999999999999999999999765544332211 267899999999988877664
Q ss_pred ---CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHH----HHhCCCccEEEEecCceeeeccCCCCCCcCC
Q 040253 77 ---GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRA----CKNAKTVRRLVFTSSAGTLDVEEHRKPVYDE 144 (338)
Q Consensus 77 ---~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e 144 (338)
++|+|||+||..... ..+..+..+++|+.++.++++. +++.+ .++||++||...+.
T Consensus 75 ~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~----------- 142 (234)
T 2ehd_A 75 AFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKN----------- 142 (234)
T ss_dssp HHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTS-----------
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcC-----------
Confidence 789999999864321 1123356788999998765554 45555 68999999987663
Q ss_pred CCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCC
Q 040253 145 TSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYP 221 (338)
Q Consensus 145 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (338)
+..+...|+.+|...+.+++.++.+ +|++++++|||.+..+.... . .. .
T Consensus 143 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----~--------~~--~-- 194 (234)
T 2ehd_A 143 -----------PFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN-----T--------PG--Q-- 194 (234)
T ss_dssp -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC------------------------------
T ss_pred -----------CCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCcccc-----c--------cc--c--
Confidence 1124568999999999998888776 48999999999887653210 0 00 0
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCC
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~ 246 (338)
..+++.+|+|++++.++..+.
T Consensus 195 ----~~~~~~~dvA~~~~~l~~~~~ 215 (234)
T 2ehd_A 195 ----AWKLKPEDVAQAVLFALEMPG 215 (234)
T ss_dssp -------CCHHHHHHHHHHHHHSCC
T ss_pred ----cCCCCHHHHHHHHHHHhCCCc
Confidence 125799999999999998654
No 155
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=99.91 E-value=9.3e-24 Score=181.20 Aligned_cols=205 Identities=20% Similarity=0.234 Sum_probs=151.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
++|+||||||+|+||.+++++|+++|++|++++|+.+.... +. ..++.++.+|++|.+++.++++
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~---~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 86 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKA---LN-----LPNTLCAQVDVTDKYTFDTAITRAEKIYG 86 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHT---TC-----CTTEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH---hh-----cCCceEEEecCCCHHHHHHHHHHHHHHCC
Confidence 35789999999999999999999999999999997543322 11 1478899999999988887765
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||...+.
T Consensus 87 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~-------------- 151 (266)
T 3p19_A 87 PADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKK-------------- 151 (266)
T ss_dssp SEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS--------------
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCC--------------
Confidence 799999999965421 112334678999999999777653 444 57999999987663
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+.++................ .....
T Consensus 152 --------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~---~~~~~---- 216 (266)
T 3p19_A 152 --------TFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDA---WRVDM---- 216 (266)
T ss_dssp --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHH---HHHHT----
T ss_pred --------CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHh---hcccc----
Confidence 11244589999999999999998874 8999999999998875432221111111110 00011
Q ss_pred CCccccHHHHHHHHHHhhcCCCC
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPNA 247 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~~ 247 (338)
.++++.+|+|+++++++..+..
T Consensus 217 -~r~~~pedvA~av~~l~~~~~~ 238 (266)
T 3p19_A 217 -GGVLAADDVARAVLFAYQQPQN 238 (266)
T ss_dssp -TCCBCHHHHHHHHHHHHHSCTT
T ss_pred -cCCCCHHHHHHHHHHHHcCCCC
Confidence 4589999999999999998654
No 156
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.91 E-value=1.6e-23 Score=178.91 Aligned_cols=218 Identities=14% Similarity=0.099 Sum_probs=152.5
Q ss_pred CCC-CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC---
Q 040253 1 MGS-IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--- 76 (338)
Q Consensus 1 m~~-~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 76 (338)
|+. .+|+||||||+|+||++++++|+++|++|++++|+.+. ....... .. .++.+|++|.+++.++++
T Consensus 1 M~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~------~~-~~~~~D~~~~~~~~~~~~~~~ 72 (256)
T 2d1y_A 1 MGLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI------GG-AFFQVDLEDERERVRFVEEAA 72 (256)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH------TC-EEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh------hC-CEEEeeCCCHHHHHHHHHHHH
Confidence 443 46899999999999999999999999999999998766 3332211 13 788999999988877664
Q ss_pred ----CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcC
Q 040253 77 ----GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYD 143 (338)
Q Consensus 77 ----~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~ 143 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++.. .+ ..++|++||...+.
T Consensus 73 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~---------- 141 (256)
T 2d1y_A 73 YALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLF---------- 141 (256)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTS----------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccC----------
Confidence 689999999865421 1122356889999999999887643 34 67999999986653
Q ss_pred CCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhH-H-HhhhhcccCCC
Q 040253 144 ETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSL-I-TALSPITRNEA 218 (338)
Q Consensus 144 e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~-~-~~~~~~~~~~~ 218 (338)
+.++...|+.+|...+.+.+.++.++ |+++++++||.+.++.......... . ...... ....
T Consensus 142 ------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~ 208 (256)
T 2d1y_A 142 ------------AEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDW-EDLH 208 (256)
T ss_dssp ------------BCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHH-HTTS
T ss_pred ------------CCCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHH-HhcC
Confidence 11234589999999999999998775 8999999999997653110000000 0 000000 0001
Q ss_pred CCCCCCCCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 219 HYPIIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 219 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
. ..++++++|+|++++.++.... .+..+++.+
T Consensus 209 ~-----~~~~~~~~dvA~~~~~l~s~~~~~~~G~~~~v~g 243 (256)
T 2d1y_A 209 A-----LRRLGKPEEVAEAVLFLASEKASFITGAILPVDG 243 (256)
T ss_dssp T-----TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred C-----CCCCcCHHHHHHHHHHHhCchhcCCCCCEEEECC
Confidence 1 1468999999999999987642 244677754
No 157
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=99.91 E-value=8.1e-23 Score=176.58 Aligned_cols=218 Identities=17% Similarity=0.151 Sum_probs=154.8
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEc-CCCcHHHHHHHhcCCCCCCcEEEEecccCCC----CCchhhhC---
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVR-DPDNKKKVKHLLELPKASTHLTLWKADLAEE----GNFDEPIR--- 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~----~~~~~~~~--- 76 (338)
+|++|||||+|+||.+++++|+++|++|++++| +.+............ ...++.++.+|++|. +++.++++
T Consensus 11 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 11 CPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA-RAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH-STTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHh-cCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence 478999999999999999999999999999999 655443332211100 014689999999999 77776664
Q ss_pred ----CccEEEEecccCCCC-----CC-----------CccchhhhhhhHHHHHHHHHHHhCC--Cc------cEEEEecC
Q 040253 77 ----GCTGVFHLATPMDFE-----SK-----------DPENEVIRPTINGMVSIMRACKNAK--TV------RRLVFTSS 128 (338)
Q Consensus 77 ----~~d~vi~~a~~~~~~-----~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~--~~------~~~v~~Ss 128 (338)
++|++||+||..... .. +..+..+++|+.++.++++++...- .. .++|++||
T Consensus 90 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS 169 (276)
T 1mxh_A 90 RAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCD 169 (276)
T ss_dssp HHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECC
T ss_pred HhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECc
Confidence 799999999864321 11 2334678999999999999887642 13 79999999
Q ss_pred ceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChh
Q 040253 129 AGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPS 205 (338)
Q Consensus 129 ~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~ 205 (338)
...+. +..+...|+.+|...+.+.+.++.++ |+++++++||.+.++ . .....
T Consensus 170 ~~~~~----------------------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~--~~~~~ 224 (276)
T 1mxh_A 170 AMTDL----------------------PLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P--AMPQE 224 (276)
T ss_dssp GGGGS----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S--SSCHH
T ss_pred hhhcC----------------------CCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c--cCCHH
Confidence 87763 11244589999999999999998875 899999999999998 2 22221
Q ss_pred HHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCCC---CCceEEecC
Q 040253 206 LITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSSH 256 (338)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~~ 256 (338)
..... ... ... .+++.+.+|+|+++++++..... +..+++.+.
T Consensus 225 ~~~~~---~~~-~p~----~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG 270 (276)
T 1mxh_A 225 TQEEY---RRK-VPL----GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGG 270 (276)
T ss_dssp HHHHH---HTT-CTT----TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHH---Hhc-CCC----CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCc
Confidence 11111 111 111 12288999999999999875332 335666543
No 158
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=99.91 E-value=2.7e-23 Score=177.25 Aligned_cols=219 Identities=17% Similarity=0.131 Sum_probs=159.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|+++||||+|+||.+++++|+++|++|++++|+.+....+..... .++.++.+|++|.+++.++++ +
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG-----PRVHALRSDIADLNEIAVLGAAAGQTLGA 82 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-----CcceEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5899999999999999999999999999999998766555443321 578999999999988876653 7
Q ss_pred ccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCCCchh
Q 040253 78 CTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLD 151 (338)
Q Consensus 78 ~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~ 151 (338)
+|++||+||..... ..+..+..+++|+.++.++.+++...- ...++|++||...+.
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~------------------ 144 (255)
T 4eso_A 83 IDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEG------------------ 144 (255)
T ss_dssp EEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSS------------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcC------------------
Confidence 99999999865421 223345679999999999999987642 135899999987664
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCC-CChhHHHhhhhcccCCCCCCCCCCCc
Q 040253 152 FVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSS-MPPSLITALSPITRNEAHYPIIKQGQ 227 (338)
Q Consensus 152 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (338)
+.++...|+.+|.+.+.+.+.++.++ |+++++++||.+..+..... .................+. .+
T Consensus 145 ----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~-----~r 215 (255)
T 4eso_A 145 ----GHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM-----KR 215 (255)
T ss_dssp ----BCTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT-----SS
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC-----CC
Confidence 11245689999999999999999886 89999999999998754321 1111111110000111111 45
Q ss_pred cccHHHHHHHHHHhhcCC-CC-CCceEEec
Q 040253 228 FVHLDDLCSAHIFLFEHP-NA-KGRYICSS 255 (338)
Q Consensus 228 ~i~v~D~a~~~~~~l~~~-~~-~~~~~~~~ 255 (338)
+.+.+|+|+++++++... .. +..+++.+
T Consensus 216 ~~~pedvA~~v~~L~s~~~~itG~~i~vdG 245 (255)
T 4eso_A 216 NGTADEVARAVLFLAFEATFTTGAKLAVDG 245 (255)
T ss_dssp CBCHHHHHHHHHHHHHTCTTCCSCEEEEST
T ss_pred CcCHHHHHHHHHHHcCcCcCccCCEEEECC
Confidence 889999999999988641 12 44567743
No 159
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=99.91 E-value=4.2e-23 Score=177.42 Aligned_cols=220 Identities=17% Similarity=0.101 Sum_probs=154.5
Q ss_pred CCcEEEEeCCchh-hHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGF-IGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|+||||||+|+ ||++++++|+++|++|++++|+.+............ ...++.++.+|++|.+++.++++
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL-GLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-CSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-CCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 3689999999985 999999999999999999999876655543332211 12579999999999998877764
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++... +...++|++||...+.
T Consensus 100 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~------------- 166 (266)
T 3o38_A 100 GRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR------------- 166 (266)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC-------------
T ss_pred CCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC-------------
Confidence 689999999964421 12234567899999999998887543 1257899999976653
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+..+...|+.+|.+.+.+++.++.+ +|+++++++||.+..+........... ... ....
T Consensus 167 ---------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---~~~-~~~~----- 228 (266)
T 3o38_A 167 ---------AQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELL---DRL-ASDE----- 228 (266)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC---------------------CC-----
T ss_pred ---------CCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHH---HHH-HhcC-----
Confidence 1124568999999999999999887 489999999999987653221111000 000 0011
Q ss_pred CCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
...++.+.+|+|+++++++.... . +..+++++
T Consensus 229 ~~~r~~~~~dva~~i~~l~s~~~~~~tG~~i~vdg 263 (266)
T 3o38_A 229 AFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSS 263 (266)
T ss_dssp TTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred CcCCCCCHHHHHHHHHHHcCccccCccCCEEEEcC
Confidence 11468899999999999987533 2 33566644
No 160
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=99.91 E-value=4.7e-24 Score=184.30 Aligned_cols=222 Identities=17% Similarity=0.149 Sum_probs=156.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELRE--AGVEADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999999999999987554433221110 11468899999999988877765
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC------CCccEEEEecCceeeeccCCCCCCcCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA------KTVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++... + ..+||++||...+.
T Consensus 99 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~------------ 165 (277)
T 2rhc_B 99 PVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQ------------ 165 (277)
T ss_dssp SCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTS------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECcccccc------------
Confidence 699999999864321 11223568899999999999987654 4 57999999986553
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCCh--hH-----HHhhhhccc
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPP--SL-----ITALSPITR 215 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~--~~-----~~~~~~~~~ 215 (338)
+..+...|+.+|...+.+.+.++.+. |+++++++||.+.++........ .. .........
T Consensus 166 ----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (277)
T 2rhc_B 166 ----------GVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITA 235 (277)
T ss_dssp ----------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred ----------CCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHh
Confidence 11234589999999999999988774 79999999999987642110000 00 000000000
Q ss_pred CCCCCCCCCCCccccHHHHHHHHHHhhcCCC---CCCceEEecC
Q 040253 216 NEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSSH 256 (338)
Q Consensus 216 ~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~~ 256 (338)
. ... .++++.+|+|++++.++..+. .+..+++.+.
T Consensus 236 ~-~p~-----~r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG 273 (277)
T 2rhc_B 236 R-VPI-----GRYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 273 (277)
T ss_dssp H-STT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred c-CCC-----CCCcCHHHHHHHHHHHhCchhcCCCCcEEEECCC
Confidence 0 111 468999999999999987542 2446677553
No 161
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=99.90 E-value=2.2e-23 Score=178.59 Aligned_cols=220 Identities=15% Similarity=0.083 Sum_probs=153.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEc-CCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVR-DPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|+||||||+|+||++++++|+++|++|++++| +.+.......... ....++.++.+|++|.+++.++++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIK--KVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--HTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHH--hcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3589999999999999999999999999999999 5443333222111 012468899999999988877765
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++... +...+||++||...+.
T Consensus 84 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~------------- 150 (261)
T 1gee_A 84 GKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKI------------- 150 (261)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTS-------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcC-------------
Confidence 799999999865421 11233467899999999888776542 2136999999976552
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+..+...|+.+|.+.+.+++.++.++ |++++++|||.++++....... . ......... ....
T Consensus 151 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~-~~~~~~~~~-~~~~--- 215 (261)
T 1gee_A 151 ---------PWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA-D-PEQRADVES-MIPM--- 215 (261)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH-S-HHHHHHHHT-TCTT---
T ss_pred ---------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhccc-C-hhHHHHHHh-cCCC---
Confidence 11245689999999999999888775 8999999999999875321000 0 000010101 1111
Q ss_pred CCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
.++++.+|+|++++.++.... . +..+++.+
T Consensus 216 --~~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~g 248 (261)
T 1gee_A 216 --GYIGEPEEIAAVAAWLASSEASYVTGITLFADG 248 (261)
T ss_dssp --SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred --CCCcCHHHHHHHHHHHhCccccCCCCcEEEEcC
Confidence 458899999999999987432 2 33566654
No 162
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.90 E-value=2.6e-23 Score=176.95 Aligned_cols=204 Identities=16% Similarity=0.190 Sum_probs=147.9
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC--CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG--YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
+|+|+||||+|+||++++++|+++| ++|++++|+.+..+.+..+ ...++.++.+|++|.+++.++++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI-----KDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC-----CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc-----cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence 6899999999999999999999999 9999999987665544332 12578999999999988887775
Q ss_pred ---CccEEEEecccCC-CC-----CCCccchhhhhhhHHHHHHHHHHHhC----------CC----ccEEEEecCceeee
Q 040253 77 ---GCTGVFHLATPMD-FE-----SKDPENEVIRPTINGMVSIMRACKNA----------KT----VRRLVFTSSAGTLD 133 (338)
Q Consensus 77 ---~~d~vi~~a~~~~-~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----------~~----~~~~v~~Ss~~v~~ 133 (338)
++|+|||+||... .. ..+..+..+++|+.++.++++++... +. ..+||++||...+.
T Consensus 78 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 157 (250)
T 1yo6_A 78 GSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSI 157 (250)
T ss_dssp GGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCS
T ss_pred CCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcccc
Confidence 7999999998654 11 11223467889999999988876532 10 46899999987664
Q ss_pred ccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhh
Q 040253 134 VEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITAL 210 (338)
Q Consensus 134 ~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~ 210 (338)
... .+.. +..+...|+.+|.+.+.+++.++.++ |+++++++||.+.++....
T Consensus 158 ~~~------~~~~---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~---------- 212 (250)
T 1yo6_A 158 TDN------TSGS---------AQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK---------- 212 (250)
T ss_dssp TTC------CSTT---------SSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC-----------------
T ss_pred CCc------cccc---------ccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----------
Confidence 111 0011 12356689999999999999999886 8999999999987654210
Q ss_pred hhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCC--CCCceEE
Q 040253 211 SPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN--AKGRYIC 253 (338)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~ 253 (338)
..+++.+|+|+.++.++.... ..|.|+.
T Consensus 213 ---------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~ 242 (250)
T 1yo6_A 213 ---------------NAALTVEQSTAELISSFNKLDNSHNGRFFM 242 (250)
T ss_dssp ---------------------HHHHHHHHHHHTTCCGGGTTCEEE
T ss_pred ---------------CCCCCHHHHHHHHHHHHhcccccCCCeEEE
Confidence 136789999999999998754 2555543
No 163
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=99.90 E-value=2.3e-23 Score=178.07 Aligned_cols=218 Identities=16% Similarity=0.124 Sum_probs=156.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEE-EcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRAT-VRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|++|||||+|+||++++++|+++|++|+++ .|+............. ...++.++.+|++|.+++.++++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEK--LGVKVLVVKANVGQPAKIKEMFQQIDETF 80 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT--TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 36899999999999999999999999999987 6765544443332221 12578999999999998877764
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|++||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||...+.
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~------------- 146 (258)
T 3oid_A 81 GRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIR------------- 146 (258)
T ss_dssp SCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTS-------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCC-------------
Confidence 679999999854321 122334678999999999988773 344 57999999987653
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCCh-hHHHhhhhcccCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPP-SLITALSPITRNEAHYPI 222 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 222 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+..+........ ....... ... ..
T Consensus 147 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~--p~-- 211 (258)
T 3oid_A 147 ---------YLENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDAR--QNT--PA-- 211 (258)
T ss_dssp ---------BCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHH--HHC--TT--
T ss_pred ---------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHH--hcC--CC--
Confidence 11245689999999999999999886 79999999999987653321111 0111000 111 11
Q ss_pred CCCCccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
.++.+.+|+|+++++++..... +..+++.+
T Consensus 212 ---~r~~~~~dva~~v~~L~s~~~~~itG~~i~vdG 244 (258)
T 3oid_A 212 ---GRMVEIKDMVDTVEFLVSSKADMIRGQTIIVDG 244 (258)
T ss_dssp ---SSCBCHHHHHHHHHHHTSSTTTTCCSCEEEEST
T ss_pred ---CCCcCHHHHHHHHHHHhCcccCCccCCEEEECC
Confidence 4688999999999999976432 44667744
No 164
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=99.90 E-value=2.6e-23 Score=177.43 Aligned_cols=214 Identities=18% Similarity=0.113 Sum_probs=152.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+.+......... ..++.++.+|++|.+++.++++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL-----GDAARYQHLDVTIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT-----GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999865544332211 1468899999999998887765
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHH----HHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIM----RACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~----~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++..+. ..+++.+ ..++|++||...+. .
T Consensus 79 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~----------- 144 (254)
T 1hdc_A 79 SVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLM--G----------- 144 (254)
T ss_dssp CCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--C-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhcc--C-----------
Confidence 799999999864421 12234567899999987554 4455555 67999999987663 1
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
..+...|+.+|...+.+.+.++.++ |+++++++||.++++.... . .... .. .......
T Consensus 145 ---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-----~---~~~~-~~-~~~~~~p 205 (254)
T 1hdc_A 145 ---------LALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAE-----T---GIRQ-GE-GNYPNTP 205 (254)
T ss_dssp ---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-----H---TCCC-ST-TSCTTST
T ss_pred ---------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccc-----c---chhH-HH-HHHhcCC
Confidence 1245589999999999999988874 8999999999998764210 0 0000 00 0000001
Q ss_pred CCccc-cHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 225 QGQFV-HLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 225 ~~~~i-~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
..++. +.+|+|++++.++.... . +..+++.+
T Consensus 206 ~~~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg 240 (254)
T 1hdc_A 206 MGRVGNEPGEIAGAVVKLLSDTSSYVTGAELAVDG 240 (254)
T ss_dssp TSSCB-CHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCCCCHHHHHHHHHHHhCchhcCCCCCEEEECC
Confidence 13477 99999999999987542 2 33556644
No 165
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=99.90 E-value=2.1e-23 Score=183.86 Aligned_cols=240 Identities=17% Similarity=0.123 Sum_probs=155.9
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCC--cHHHHHHHhcC-CCCCCcEEEEecccCCCCCchhhhC-
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPD--NKKKVKHLLEL-PKASTHLTLWKADLAEEGNFDEPIR- 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~- 76 (338)
|++.+|+||||||+|+||.+++++|+++|++|++.+|+.. +...++.+... .....++.++.+|++|.+++.++++
T Consensus 1 M~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~ 80 (324)
T 3u9l_A 1 MVMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQ 80 (324)
T ss_dssp ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHH
Confidence 6666789999999999999999999999999999999642 22222222211 0112578999999999998888775
Q ss_pred ------CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCC
Q 040253 77 ------GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPV 141 (338)
Q Consensus 77 ------~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~ 141 (338)
++|+|||+||..... ..+.....+++|+.++.++++++ ++.+ ..++|++||...+. .
T Consensus 81 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~--~----- 152 (324)
T 3u9l_A 81 IIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAG--G----- 152 (324)
T ss_dssp HHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--C-----
T ss_pred HHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhcc--C-----
Confidence 799999999954311 22233567899999999999988 4445 67999999987663 1
Q ss_pred cCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCC---CCChhHHHhhhhccc
Q 040253 142 YDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTS---SMPPSLITALSPITR 215 (338)
Q Consensus 142 ~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~~ 215 (338)
.......|+.||.+.|.+.+.++.+ +|+++++++||.+.++.... ........... ...
T Consensus 153 --------------~~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-~~~ 217 (324)
T 3u9l_A 153 --------------TPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAE-YEA 217 (324)
T ss_dssp --------------CCSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHH-HHH
T ss_pred --------------CCCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHh-hcc
Confidence 0112457999999999999999888 48999999999998653211 11111100000 000
Q ss_pred CCCCCCCCC---------CCccccHHHHHHHHHHhhcCCCC--CCceEEecCCCCHHHHH
Q 040253 216 NEAHYPIIK---------QGQFVHLDDLCSAHIFLFEHPNA--KGRYICSSHPATILELA 264 (338)
Q Consensus 216 ~~~~~~~~~---------~~~~i~v~D~a~~~~~~l~~~~~--~~~~~~~~~~~t~~e~~ 264 (338)
.+ ...... ..+..+.+|+|++++.+++.+.. ...+.+++.......+.
T Consensus 218 ~~-~~~~~~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~~~~~~ 276 (324)
T 3u9l_A 218 GP-NAGLGEEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDGADVGF 276 (324)
T ss_dssp TT-TTTHHHHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCSHHHHH
T ss_pred cc-ccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchHHHHHH
Confidence 00 000000 01236889999999999988742 22445666555644333
No 166
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=99.90 E-value=4.7e-23 Score=178.83 Aligned_cols=219 Identities=13% Similarity=0.070 Sum_probs=154.9
Q ss_pred CCcEEEEeCCc--hhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 4 IAETVCVTGAS--GFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 4 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
.+|+||||||+ |+||.+++++|+++|++|++++|+.+.....+.+.... +++.++.+|++|.+++.++++
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~ 96 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGF---GSDLVVKCDVSLDEDIKNLKKFLEEN 96 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35789999999 99999999999999999999999875333333332211 246789999999988877764
Q ss_pred --CccEEEEecccCCC---------CCCCccchhhhhhhHHHHHHHHHHHhCC--CccEEEEecCceeeeccCCCCCCcC
Q 040253 77 --GCTGVFHLATPMDF---------ESKDPENEVIRPTINGMVSIMRACKNAK--TVRRLVFTSSAGTLDVEEHRKPVYD 143 (338)
Q Consensus 77 --~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~~~ 143 (338)
++|+|||+||.... ...+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~---------- 166 (285)
T 2p91_A 97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEK---------- 166 (285)
T ss_dssp TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTS----------
T ss_pred cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhcc----------
Confidence 78999999986432 1122345688999999999999987652 136999999976653
Q ss_pred CCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCC
Q 040253 144 ETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHY 220 (338)
Q Consensus 144 e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+.++....... ........... ...
T Consensus 167 ------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~-~p~ 231 (285)
T 2p91_A 167 ------------VVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITG--FHLLMEHTTKV-NPF 231 (285)
T ss_dssp ------------BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTT--HHHHHHHHHHH-STT
T ss_pred ------------CCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccc--hHHHHHHHHhc-CCC
Confidence 11234589999999999999988775 8999999999999886432111 01111100011 111
Q ss_pred CCCCCCccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 221 PIIKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 221 ~~~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
..+.+++|+|++++.++..... +..+++.+
T Consensus 232 -----~~~~~~~dva~~~~~l~s~~~~~~tG~~~~vdg 264 (285)
T 2p91_A 232 -----GKPITIEDVGDTAVFLCSDWARAITGEVVHVDN 264 (285)
T ss_dssp -----SSCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred -----CCCcCHHHHHHHHHHHcCCcccCCCCCEEEECC
Confidence 3478999999999999864332 34566644
No 167
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=99.90 E-value=3.2e-23 Score=179.38 Aligned_cols=220 Identities=17% Similarity=0.130 Sum_probs=155.5
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
..+|+||||||+|+||++++++|+++|++|++++|+.+............ ..++.++.+|++|.+++.++++
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 109 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY--GVHSKAYKCNISDPKSVEETISQQEKDF 109 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH--CSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence 44689999999999999999999999999999999877655543322111 1468999999999988887765
Q ss_pred -CccEEEEecccCCC-CC---C---CccchhhhhhhHH----HHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCC
Q 040253 77 -GCTGVFHLATPMDF-ES---K---DPENEVIRPTING----MVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDE 144 (338)
Q Consensus 77 -~~d~vi~~a~~~~~-~~---~---~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e 144 (338)
++|+|||+||.... .. . +..+..+++|+.+ +..+++.+++.+ .++||++||...+. ..
T Consensus 110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~--~~------- 179 (279)
T 3ctm_A 110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKI--VN------- 179 (279)
T ss_dssp SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSC--C--------
T ss_pred CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhcc--CC-------
Confidence 49999999986532 11 1 1224578899999 456666676666 68999999986553 10
Q ss_pred CCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCC
Q 040253 145 TSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYP 221 (338)
Q Consensus 145 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (338)
+..+...|+.+|.+.|.+++.++.++ + ++++++||.+.++.... .......... ... ..
T Consensus 180 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~-~~~~~~~~~~--~~~--p~- 241 (279)
T 3ctm_A 180 -----------IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDF-ASKDMKAKWW--QLT--PL- 241 (279)
T ss_dssp -------------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSS-CCHHHHHHHH--HHS--TT-
T ss_pred -----------CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccc-cChHHHHHHH--HhC--Cc-
Confidence 01245689999999999999999885 6 99999999998775421 1111111110 011 11
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEecC
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSSH 256 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~~ 256 (338)
.++++.+|+|++++.++.... . +..++++++
T Consensus 242 ----~~~~~~~dvA~~~~~l~s~~~~~~tG~~i~vdgG 275 (279)
T 3ctm_A 242 ----GREGLTQELVGGYLYLASNASTFTTGSDVVIDGG 275 (279)
T ss_dssp ----CSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ----cCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 358999999999999997532 2 345666543
No 168
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=99.90 E-value=4.6e-23 Score=175.10 Aligned_cols=209 Identities=14% Similarity=0.120 Sum_probs=153.3
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|+||||||+|+||++++++|+++|++|++++|+.+........ .+++.++.+|++|++++.++++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 75 (247)
T 3dii_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKE------RPNLFYFHGDVADPLTLKKFVEYAMEKLQR 75 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTT------CTTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh------cccCCeEEeeCCCHHHHHHHHHHHHHHcCC
Confidence 68999999999999999999999999999999986554443221 1467899999999998887764 7
Q ss_pred ccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHHhCC--CccEEEEecCceeeeccCCCCCCcCCCCCCch
Q 040253 78 CTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACKNAK--TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDL 150 (338)
Q Consensus 78 ~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~ 150 (338)
+|++||+||.... ...+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 76 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~----------------- 138 (247)
T 3dii_A 76 IDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQ----------------- 138 (247)
T ss_dssp CCEEEECCC-CCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTS-----------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEcchhhcC-----------------
Confidence 9999999986442 1123345678999999999998876532 135999999987763
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHHHHHHHcC--ccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCcc
Q 040253 151 DFVRSVKMTGWMYFVSKTLAEQAAWKFAEENN--IDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQF 228 (338)
Q Consensus 151 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (338)
+..+...|+.+|.+.+.+.+.++.+++ ++++++.||.+..+..... .. .... . .+. .++
T Consensus 139 -----~~~~~~~Y~asKaa~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~-~~---~~~~---~--~p~-----~r~ 199 (247)
T 3dii_A 139 -----SEPDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEF-TQ---EDCA---A--IPA-----GKV 199 (247)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---C-CH---HHHH---T--STT-----SSC
T ss_pred -----CCCCcHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEEeCccCCcchhhH-HH---HHHh---c--CCC-----CCC
Confidence 112345899999999999999998864 8999999999876643221 11 0000 1 111 458
Q ss_pred ccHHHHHHHHHHhhcCCCCCC-ceEEec
Q 040253 229 VHLDDLCSAHIFLFEHPNAKG-RYICSS 255 (338)
Q Consensus 229 i~v~D~a~~~~~~l~~~~~~~-~~~~~~ 255 (338)
...+|+|++++.++......| .+++.+
T Consensus 200 ~~p~dva~~v~~l~~~~~itG~~i~vdG 227 (247)
T 3dii_A 200 GTPKDISNMVLFLCQQDFITGETIIVDG 227 (247)
T ss_dssp BCHHHHHHHHHHHHTCSSCCSCEEEEST
T ss_pred cCHHHHHHHHHHHHcCCCCCCcEEEECC
Confidence 899999999999996554445 556644
No 169
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=99.90 E-value=8e-23 Score=176.37 Aligned_cols=218 Identities=16% Similarity=0.083 Sum_probs=153.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+|+||||+|+||++++++|+++|++|++++|+.+........... . .++.++.+|++|.+++.++++
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA--Y-GDCQAIPADLSSEAGARRLAQALGELSA 104 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT--S-SCEEECCCCTTSHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--c-CceEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 458999999999999999999999999999999986554443322211 1 268899999999988877664
Q ss_pred CccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHH----hCCC---ccEEEEecCceeeeccCCCCCCcCC
Q 040253 77 GCTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACK----NAKT---VRRLVFTSSAGTLDVEEHRKPVYDE 144 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~---~~~~v~~Ss~~v~~~~~~~~~~~~e 144 (338)
++|+|||+||.... ...+..+..+++|+.++.++++++. +.+. ..++|++||...+. ..
T Consensus 105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~--~~------- 175 (276)
T 2b4q_A 105 RLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGIS--AM------- 175 (276)
T ss_dssp CCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTC--CC-------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcC--CC-------
Confidence 79999999986432 1222345688999999988877664 3331 27999999987663 10
Q ss_pred CCCCchhhhhhccCCCc-hHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhccc-CCCC
Q 040253 145 TSWSDLDFVRSVKMTGW-MYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITR-NEAH 219 (338)
Q Consensus 145 ~~~~~~~~~~~~~~p~~-~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~ 219 (338)
.... .|+.+|.+.+.+.+.++.++ |+++++++||.+..+.... ........... ....
T Consensus 176 -------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~----~~~~~~~~~~~~~~~p 238 (276)
T 2b4q_A 176 -------------GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH----IANDPQALEADSASIP 238 (276)
T ss_dssp -------------CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHH----HHHCHHHHHHHHHTST
T ss_pred -------------CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhh----cchhHHHHHHhhcCCC
Confidence 1223 79999999999999998774 8999999999998764211 00000000001 0111
Q ss_pred CCCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 220 YPIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 220 ~~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
. .++.+.+|+|+++++++.... . +..+++.+
T Consensus 239 ~-----~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG 272 (276)
T 2b4q_A 239 M-----GRWGRPEEMAALAISLAGTAGAYMTGNVIPIDG 272 (276)
T ss_dssp T-----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred C-----CCcCCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence 1 458899999999999987542 2 33556644
No 170
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=99.90 E-value=1.8e-22 Score=174.74 Aligned_cols=228 Identities=18% Similarity=0.128 Sum_probs=158.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.++++|||||+|+||.+++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVG--AGGQAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTT--TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 467899999999999999999999999999999987665554433322 22578999999999988877764
Q ss_pred CccEEEEecccCCC------CCCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 GCTGVFHLATPMDF------ESKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 ~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|++||+||.... ...+..+..+++|+.++.++++++ ++.+ ..++|++||...+. ..
T Consensus 105 ~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~--~~--------- 172 (283)
T 3v8b_A 105 HLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTR--TF--------- 172 (283)
T ss_dssp CCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTT--BC---------
T ss_pred CCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhcc--CC---------
Confidence 79999999996431 111233567899999999998887 4444 57999999976542 00
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+..+........................+.
T Consensus 173 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~- 242 (283)
T 3v8b_A 173 ---------TTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPI- 242 (283)
T ss_dssp ---------CSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGG-
T ss_pred ---------CCCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCcc-
Confidence 11245689999999999999999885 79999999999987754332111110000000000000000
Q ss_pred CCCccccHHHHHHHHHHhhcCCCC--CC-ceEEec
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPNA--KG-RYICSS 255 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~~--~~-~~~~~~ 255 (338)
...++...+|+|+++++++..... .| .+++.+
T Consensus 243 ~~~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG 277 (283)
T 3v8b_A 243 TDGQPGRSEDVAELIRFLVSERARHVTGSPVWIDG 277 (283)
T ss_dssp GTTCCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred ccCCCCCHHHHHHHHHHHcCccccCCcCCEEEECc
Confidence 003578899999999999875432 34 456644
No 171
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=99.90 E-value=1.5e-22 Score=173.10 Aligned_cols=212 Identities=18% Similarity=0.146 Sum_probs=150.4
Q ss_pred CCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 2 GSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
...+|+||||||+|+||++++++|+++|++|++++|+.+..... +.. .++.++.+|++|.+++.++++
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~--~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~ 96 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE--LRQ-----AGAVALYGDFSCETGIMAFIDLLKTQ 96 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH--HHH-----HTCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH--HHh-----cCCeEEECCCCCHHHHHHHHHHHHHh
Confidence 33468999999999999999999999999999999987653221 111 247899999999988877664
Q ss_pred --CccEEEEecccCCCCCC----CccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 --GCTGVFHLATPMDFESK----DPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 --~~d~vi~~a~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|++||+||....... +..+..+++|+.++.++.+++.. .+ ..++|++||...+.
T Consensus 97 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~------------- 162 (260)
T 3gem_A 97 TSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRK------------- 162 (260)
T ss_dssp CSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGT-------------
T ss_pred cCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcC-------------
Confidence 69999999996542211 12235789999999999887743 34 57999999987663
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc--CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN--NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+..+...|+.+|.+.+.+.+.++.++ ++++++++||.+..+..... .. .... ......
T Consensus 163 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~--~~----~~~~-~~~~p~---- 222 (260)
T 3gem_A 163 ---------GSSKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA--AY----RANA-LAKSAL---- 222 (260)
T ss_dssp ---------CCSSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC----------------------CCS----
T ss_pred ---------CCCCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH--HH----HHHH-HhcCCC----
Confidence 11245689999999999999999886 59999999999987642210 00 0000 000111
Q ss_pred CCccccHHHHHHHHHHhhcCCCCCC-ceEEec
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPNAKG-RYICSS 255 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~~~~-~~~~~~ 255 (338)
..+...+|+|++++++++.....| .+++.+
T Consensus 223 -~r~~~~edva~~v~~L~~~~~itG~~i~vdG 253 (260)
T 3gem_A 223 -GIEPGAEVIYQSLRYLLDSTYVTGTTLTVNG 253 (260)
T ss_dssp -CCCCCTHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred -CCCCCHHHHHHHHHHHhhCCCCCCCEEEECC
Confidence 347789999999999997555444 567744
No 172
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=99.90 E-value=3.4e-23 Score=178.96 Aligned_cols=219 Identities=16% Similarity=0.108 Sum_probs=159.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG--GGGEAAALAGDVGDEALHEALVELAVRRFG 84 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTT--TTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 358999999999999999999999999999999987665554433221 22578999999999988887764
Q ss_pred CccEEEEecccCCC------CCCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 GCTGVFHLATPMDF------ESKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 ~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|++||+||.... ...+..+..+++|+.++.++.+++.. .+ ..++|++||...+. .
T Consensus 85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~---------- 151 (280)
T 3tox_A 85 GLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHT--A---------- 151 (280)
T ss_dssp CCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTT--B----------
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCc--C----------
Confidence 79999999996431 12233457889999999999887643 33 46999999976652 0
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCC---ChhHHHhhhhcccCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSM---PPSLITALSPITRNEAHY 220 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~ 220 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+.++...... ........ ......
T Consensus 152 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~----~~~~p~ 218 (280)
T 3tox_A 152 ---------GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFV----EGLHAL 218 (280)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHH----HTTSTT
T ss_pred ---------CCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHH----hccCcc
Confidence 11245689999999999999998885 899999999999987532211 11111111 111111
Q ss_pred CCCCCCccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 221 PIIKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 221 ~~~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
.++.+.+|+|+++++++..... +..+++.+
T Consensus 219 -----~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdG 251 (280)
T 3tox_A 219 -----KRIARPEEIAEAALYLASDGASFVTGAALLADG 251 (280)
T ss_dssp -----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -----CCCcCHHHHHHHHHHHhCccccCCcCcEEEECC
Confidence 4688999999999999976432 44667744
No 173
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=99.90 E-value=4.8e-23 Score=176.41 Aligned_cols=228 Identities=15% Similarity=0.077 Sum_probs=152.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc-HHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN-KKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+.+. ........... ...++.++.+|++|.+++.++++
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ-HGVKVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHH-HTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhc-cCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999999998765 33332211100 01468899999999998877764
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|++||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||...+. .
T Consensus 82 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~---------- 148 (260)
T 1x1t_A 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLV--A---------- 148 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--C----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCc--C----------
Confidence 799999999864421 122345688999999999888774 334 57999999987663 1
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCC-CC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHY-PI 222 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 222 (338)
..+...|+.+|...+.+.+.++.++ |+++++++||.+.++.......................+ ..
T Consensus 149 ----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (260)
T 1x1t_A 149 ----------SANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSE 218 (260)
T ss_dssp ----------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHH
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhc
Confidence 1245589999999999999988775 899999999999887533211100000000000000000 00
Q ss_pred -CCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 223 -IKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 223 -~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
....++.+.+|+|+++++++.... . +..+++.+
T Consensus 219 ~~p~~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdg 255 (260)
T 1x1t_A 219 KQPSLQFVTPEQLGGTAVFLASDAAAQITGTTVSVDG 255 (260)
T ss_dssp HCTTCCCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred cCCCCCCcCHHHHHHHHHHHhChhhcCCCCCEEEECC
Confidence 001468999999999999987532 2 34566644
No 174
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=99.90 E-value=4.8e-23 Score=179.12 Aligned_cols=219 Identities=14% Similarity=0.138 Sum_probs=158.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc-HHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN-KKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+... .......... ...++.++.+|++|.+++.++++
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEK--EGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHT--TTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999999999999998653 2222222221 12578999999999988877764
Q ss_pred -CccEEEEecccCCCC------CCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 77 -GCTGVFHLATPMDFE------SKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
++|++||+||..... ..+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 124 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~--------------- 188 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYE--------------- 188 (291)
T ss_dssp SSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHH---------------
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcC---------------
Confidence 789999999864321 223345789999999999999987652 245899999987774
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQ 225 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (338)
...+...|+.+|.+.+.+.+.++.++ |+++++++||.++++........... .. .......
T Consensus 189 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~---~~-~~~~~p~----- 252 (291)
T 3ijr_A 189 -------GNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKV---SQ-FGSNVPM----- 252 (291)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHH---HH-TTTTSTT-----
T ss_pred -------CCCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHH---HH-HHccCCC-----
Confidence 11234589999999999999999876 89999999999988642111111100 00 0111111
Q ss_pred CccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 226 GQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 226 ~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
.++.+.+|+|+++++++.... . +..+++.+
T Consensus 253 ~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 285 (291)
T 3ijr_A 253 QRPGQPYELAPAYVYLASSDSSYVTGQMIHVNG 285 (291)
T ss_dssp SSCBCGGGTHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred CCCcCHHHHHHHHHHHhCCccCCCcCCEEEECC
Confidence 568899999999999987543 2 34566644
No 175
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=99.90 E-value=3.8e-23 Score=178.21 Aligned_cols=219 Identities=15% Similarity=0.147 Sum_probs=149.7
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEE-EcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRAT-VRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
+++||||||+|+||++++++|+++|++|+++ .|+.+..+........ ...++.++.+|++|.+++.++++
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITE--SGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--TTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 5789999999999999999999999999887 4444444333322211 12578999999999988877664
Q ss_pred CccEEEEecccCCC-C-----CCCccchhhhhhhHHHHHHHHHHHhC------CCccEEEEecCceeeeccCCCCCCcCC
Q 040253 77 GCTGVFHLATPMDF-E-----SKDPENEVIRPTINGMVSIMRACKNA------KTVRRLVFTSSAGTLDVEEHRKPVYDE 144 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-~-----~~~~~~~~~~~n~~~~~~l~~~~~~~------~~~~~~v~~Ss~~v~~~~~~~~~~~~e 144 (338)
++|+|||+||.... . ..+..+..+++|+.++.++++++... +...+||++||...+. ..
T Consensus 104 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~------- 174 (272)
T 4e3z_A 104 RLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAIL--GS------- 174 (272)
T ss_dssp CCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHH--CC-------
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhcc--CC-------
Confidence 78999999996542 1 22334578899999999988877543 1246899999987664 11
Q ss_pred CCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCC
Q 040253 145 TSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYP 221 (338)
Q Consensus 145 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (338)
......|+.+|.+.+.+++.++.++ |+++++++||.+.++.......... .... .....
T Consensus 175 ------------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~---~~~~-~~~~~-- 236 (272)
T 4e3z_A 175 ------------ATQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDR---AREM-APSVP-- 236 (272)
T ss_dssp ------------TTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC----------------------CCT--
T ss_pred ------------CCCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHH---HHHH-hhcCC--
Confidence 1123479999999999999998876 8999999999999875332111000 0000 00011
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
...+.+++|+|+++++++..... +..+++++
T Consensus 237 ---~~~~~~~edvA~~i~~l~s~~~~~~tG~~i~vdg 270 (272)
T 4e3z_A 237 ---MQRAGMPEEVADAILYLLSPSASYVTGSILNVSG 270 (272)
T ss_dssp ---TSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ---cCCCcCHHHHHHHHHHHhCCccccccCCEEeecC
Confidence 14578899999999999965432 44677754
No 176
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=99.90 E-value=8.5e-23 Score=173.39 Aligned_cols=217 Identities=16% Similarity=0.162 Sum_probs=152.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEc-CCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVR-DPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|+|+||||+|+||++++++|+++|++|++++| +.+........... ...++.++.+|++|++++.++++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKK--LGSDAIAVRADVANAEDVTNMVKQTVDVF 80 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999 54443333221111 11468899999999998887765
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|++||+||..... ..+..+..+++|+.++.++.+++. +.+ ..++|++||...+. .
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~---------- 147 (246)
T 2uvd_A 81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVT--G---------- 147 (246)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHH--C----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcC--C----------
Confidence 799999999865321 122345678999999777766553 345 57999999986653 1
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
.++...|+.+|...+.+.+.++.+. |+++++++||.+.++.... .......... .. ...
T Consensus 148 ----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-~~~~~~~~~~---~~-~p~--- 209 (246)
T 2uvd_A 148 ----------NPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDV-LDENIKAEML---KL-IPA--- 209 (246)
T ss_dssp ----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSC-CCTTHHHHHH---HT-CTT---
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhh-cCHHHHHHHH---hc-CCC---
Confidence 1134589999999999998888764 8999999999998775332 1111111110 11 111
Q ss_pred CCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
.++++.+|+|++++.++.... . +..+++.+
T Consensus 210 --~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg 242 (246)
T 2uvd_A 210 --AQFGEAQDIANAVTFFASDQSKYITGQTLNVDG 242 (246)
T ss_dssp --CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred --CCCcCHHHHHHHHHHHcCchhcCCCCCEEEECc
Confidence 358999999999999986532 2 33556644
No 177
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=99.90 E-value=3e-23 Score=178.37 Aligned_cols=214 Identities=16% Similarity=0.123 Sum_probs=155.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCC-CcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDP-DNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+. ............ ...++.++.+|++|.+++.++++
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAA--AGGEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--TTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 468999999999999999999999999999999843 333332222111 12578999999999998887765
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|++||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||...+.
T Consensus 105 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------------- 170 (269)
T 4dmm_A 105 GRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEM------------- 170 (269)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHH-------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcC-------------
Confidence 799999999965421 223345688999999999988763 334 56999999987653
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+......|+.+|.+.+.+.+.++.++ |+++++++||.+.++.... ...... ......
T Consensus 171 ---------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~----~~~~~~----~~~~p~--- 230 (269)
T 4dmm_A 171 ---------GNPGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSE----LAAEKL----LEVIPL--- 230 (269)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCH----HHHHHH----GGGCTT---
T ss_pred ---------CCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCccccc----ccHHHH----HhcCCC---
Confidence 11235589999999999999988874 8999999999998765321 111100 111111
Q ss_pred CCCccccHHHHHHHHHHhhcCCC---C-CCceEEec
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPN---A-KGRYICSS 255 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~---~-~~~~~~~~ 255 (338)
.++.+.+|+|+++++++..+. . +..+++.+
T Consensus 231 --~r~~~~~dvA~~v~~l~s~~~~~~itG~~i~vdG 264 (269)
T 4dmm_A 231 --GRYGEAAEVAGVVRFLAADPAAAYITGQVINIDG 264 (269)
T ss_dssp --SSCBCHHHHHHHHHHHHHCGGGGGCCSCEEEEST
T ss_pred --CCCCCHHHHHHHHHHHhCCcccCCCcCCEEEECC
Confidence 468899999999999997632 2 44667754
No 178
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=99.90 E-value=7e-23 Score=179.41 Aligned_cols=222 Identities=12% Similarity=0.071 Sum_probs=155.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHH-HhcC-C-CCCCcEEEEecccCCCCCchhhhC-----
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKH-LLEL-P-KASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~-~-~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
+|+|+||||+|+||++++++|+++|++|++++|+.+....... +... . ....++.++.+|++|.+++.++++
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 97 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT 97 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHH
Confidence 5899999999999999999999999999999998655443322 2110 0 112578999999999998887765
Q ss_pred --CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCC
Q 040253 77 --GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 77 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++... + ..++|++||.. +. .
T Consensus 98 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~--~--------- 164 (303)
T 1yxm_A 98 FGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KA--G--------- 164 (303)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TT--C---------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-cc--C---------
Confidence 599999999954311 11223467899999999999987542 2 46899999976 32 1
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPI 222 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (338)
..+...|+.+|...+.+.+.+++++ |++++++|||.++|+.................... ..
T Consensus 165 -----------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~p--- 229 (303)
T 1yxm_A 165 -----------FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQK-IP--- 229 (303)
T ss_dssp -----------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGG-ST---
T ss_pred -----------CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhc-Cc---
Confidence 1134589999999999999998885 89999999999999842111111000001100010 01
Q ss_pred CCCCccccHHHHHHHHHHhhcCCC--C-CCceEEecC
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSSH 256 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~~ 256 (338)
...+.+++|+|++++.++.... . +..+++.+.
T Consensus 230 --~~~~~~~~dvA~~i~~l~~~~~~~~~G~~~~v~gG 264 (303)
T 1yxm_A 230 --AKRIGVPEEVSSVVCFLLSPAASFITGQSVDVDGG 264 (303)
T ss_dssp --TSSCBCTHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred --ccCCCCHHHHHHHHHHHhCcccccCCCcEEEECCC
Confidence 1358899999999999996533 2 335667543
No 179
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=99.90 E-value=3.8e-23 Score=178.47 Aligned_cols=215 Identities=15% Similarity=0.050 Sum_probs=153.0
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHH-CCCeEEEEEcCCCcHHHHHH-HhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLE-RGYAVRATVRDPDNKKKVKH-LLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
+.+|+|+||||+|+||++++++|++ .|++|++++|+.+....... +... ..++.++.+|++|.+++.++++
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~ 78 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE---GLSPRFHQLDIDDLQSIRALRDFLRK 78 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc---CCeeEEEECCCCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999 89999999998655443322 2111 1468899999999988887775
Q ss_pred ---CccEEEEecccCCCCCC-----CccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCC---------
Q 040253 77 ---GCTGVFHLATPMDFESK-----DPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHR--------- 138 (338)
Q Consensus 77 ---~~d~vi~~a~~~~~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~--------- 138 (338)
++|+|||+||....... +..+..+++|+.++.++++++.... +..+||++||...+......
T Consensus 79 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~ 158 (276)
T 1wma_A 79 EYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFR 158 (276)
T ss_dssp HHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHH
T ss_pred hcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhcc
Confidence 79999999986542211 2234678999999999999998763 13599999998776421000
Q ss_pred CCCcCCCCCCchh--h--------hhhccCCCchHHHHHHHHHHHHHHHHHH-------cCccEEEEcCCceeCCCCCCC
Q 040253 139 KPVYDETSWSDLD--F--------VRSVKMTGWMYFVSKTLAEQAAWKFAEE-------NNIDFISIIPSLVVGPFLTSS 201 (338)
Q Consensus 139 ~~~~~e~~~~~~~--~--------~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-------~~~~~~ilRp~~v~G~~~~~~ 201 (338)
...++|+++.... + ...+..|...|+.+|.+.|.+++.++.+ .|+++++++||.+.++....
T Consensus 159 ~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~- 237 (276)
T 1wma_A 159 SETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP- 237 (276)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT-
T ss_pred ccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc-
Confidence 0112222100000 0 0001124579999999999999888876 48999999999987654211
Q ss_pred CChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCC
Q 040253 202 MPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHP 245 (338)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 245 (338)
..+.+.+|+|++++.++..+
T Consensus 238 ------------------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 238 ------------------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp ------------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred ------------------------cccCChhHhhhhHhhhhcCc
Confidence 24789999999999999754
No 180
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=99.90 E-value=4.2e-23 Score=179.38 Aligned_cols=221 Identities=14% Similarity=0.048 Sum_probs=153.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|++++.++++
T Consensus 33 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (291)
T 3cxt_A 33 KGKIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKA--AGINAHGYVCDVTDEDGIQAMVAQIESEVG 110 (291)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHH--TTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 458999999999999999999999999999999986554433221111 11467899999999998877765
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||...+.
T Consensus 111 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~-------------- 175 (291)
T 3cxt_A 111 IIDILVNNAGIIRRVPMIEMTAAQFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSEL-------------- 175 (291)
T ss_dssp CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC--------------
T ss_pred CCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECcccccc--------------
Confidence 599999999864421 122345688999999998887764 334 57999999976543
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCC-hhHHH---hhhhcccCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMP-PSLIT---ALSPITRNEAHY 220 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~-~~~~~---~~~~~~~~~~~~ 220 (338)
+..+...|+.+|...+.+.+.++.++ |+++++++||.+.++....... ..... ......+. ...
T Consensus 176 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~p~ 246 (291)
T 3cxt_A 176 --------GRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAK-TPA 246 (291)
T ss_dssp --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------------CHHHHHHHHH-CTT
T ss_pred --------CCCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCcCcchhhhccchhhhhhhhHHhhhhcc-CCC
Confidence 11245589999999999999988774 8999999999998875322110 00000 00000000 111
Q ss_pred CCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 221 PIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 221 ~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
.++.+.+|+|+++++++.... . +..+++.+
T Consensus 247 -----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG 279 (291)
T 3cxt_A 247 -----ARWGEAEDLMGPAVFLASDASNFVNGHILYVDG 279 (291)
T ss_dssp -----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -----CCCCCHHHHHHHHHHHhCccccCCcCCeEEECC
Confidence 358899999999999987542 2 33556644
No 181
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=99.90 E-value=7.2e-23 Score=176.35 Aligned_cols=220 Identities=20% Similarity=0.167 Sum_probs=154.5
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc-HHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC---
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN-KKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--- 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 76 (338)
|...+|+|+||||+|+||.+++++|+++|++|++++|+... .+.+...... ...++.++.+|++|.+++.++++
T Consensus 25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~ 102 (271)
T 4iin_A 25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEE--KGYKAAVIKFDAASESDFIEAIQTIV 102 (271)
T ss_dssp CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHh--cCCceEEEECCCCCHHHHHHHHHHHH
Confidence 33456899999999999999999999999999999995443 2333222211 12578999999999988877764
Q ss_pred ----CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcC
Q 040253 77 ----GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYD 143 (338)
Q Consensus 77 ----~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~ 143 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++.. .+ ..++|++||...+.
T Consensus 103 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~---------- 171 (271)
T 4iin_A 103 QSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGER---------- 171 (271)
T ss_dssp HHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH----------
T ss_pred HhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcC----------
Confidence 799999999965422 1223457789999999888877643 34 57999999987653
Q ss_pred CCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCC
Q 040253 144 ETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHY 220 (338)
Q Consensus 144 e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (338)
+..+...|+.+|.+.+.+++.++.+ .|+++++++||.+..+....... ... ... .....
T Consensus 172 ------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~---~~~-~~~~~- 233 (271)
T 4iin_A 172 ------------GNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKD-ELK---ADY-VKNIP- 233 (271)
T ss_dssp ------------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------C-GGGCT-
T ss_pred ------------CCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcH-HHH---HHH-HhcCC-
Confidence 1124568999999999999999887 48999999999997764322100 000 000 00011
Q ss_pred CCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 221 PIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 221 ~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
..++.+.+|+|++++.++.... . +..+++.+
T Consensus 234 ----~~~~~~p~dvA~~i~~l~s~~~~~itG~~i~vdG 267 (271)
T 4iin_A 234 ----LNRLGSAKEVAEAVAFLLSDHSSYITGETLKVNG 267 (271)
T ss_dssp ----TCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ----cCCCcCHHHHHHHHHHHhCCCcCCCcCCEEEeCC
Confidence 1468899999999999997543 2 44566654
No 182
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=99.90 E-value=4.1e-23 Score=179.84 Aligned_cols=219 Identities=13% Similarity=0.097 Sum_probs=156.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc--HHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN--KKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+... .......... ...++.++.+|++|.+++.++++
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEE--CGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHH--TTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHH--cCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 35899999999999999999999999999999886432 2222222211 12578999999999988877664
Q ss_pred --CccEEEEecccCCC-C-----CCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 --GCTGVFHLATPMDF-E-----SKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 --~~d~vi~~a~~~~~-~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||.... . ..+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 126 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~-------------- 191 (294)
T 3r3s_A 126 LGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQ-------------- 191 (294)
T ss_dssp HTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTS--------------
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhcc--------------
Confidence 79999999996431 1 223345789999999999999987654 124999999988774
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCC-CCChhHHHhhhhcccCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTS-SMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+.++.... ...... .... .....
T Consensus 192 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~---~~~~-~~~~p---- 255 (294)
T 3r3s_A 192 --------PSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDK---IPQF-GQQTP---- 255 (294)
T ss_dssp --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGG---STTT-TTTST----
T ss_pred --------CCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHH---HHHH-HhcCC----
Confidence 11245589999999999999999886 8999999999998864111 000000 0000 01111
Q ss_pred CCCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
..++...+|+|+++++++.... .+.++++.+
T Consensus 256 -~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 289 (294)
T 3r3s_A 256 -MKRAGQPAELAPVYVYLASQESSYVTAEVHGVCG 289 (294)
T ss_dssp -TSSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -CCCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 1468899999999999986543 244677744
No 183
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=99.90 E-value=5.1e-23 Score=176.93 Aligned_cols=223 Identities=15% Similarity=0.137 Sum_probs=152.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+++||||+|+||++++++|+++|++|++++|+.+................++.++.+|++|.+++.++++
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3589999999999999999999999999999999875544332211100001468899999999998887765
Q ss_pred CccEEEEecccCCC-C-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 GCTGVFHLATPMDF-E-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|+|||+||.... . ..+..+..+++|+.++..+.+++ ++.+ ..++|++||...+.
T Consensus 92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------------- 157 (267)
T 1iy8_A 92 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIR------------- 157 (267)
T ss_dssp CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS-------------
T ss_pred CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcc-------------
Confidence 68999999986432 1 11234567889998887665544 4445 57999999987653
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCC----CChhHHHhhhhcccCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSS----MPPSLITALSPITRNEAH 219 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~ 219 (338)
+..+...|+.+|...+.+.+.++.++ |+++++++||.+.++..... .............. ...
T Consensus 158 ---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~p 227 (267)
T 1iy8_A 158 ---------GIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQ-VNP 227 (267)
T ss_dssp ---------BCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHT-TCT
T ss_pred ---------CCCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhc-cCC
Confidence 11245689999999999999888774 89999999999987642100 00000000000001 111
Q ss_pred CCCCCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 220 YPIIKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 220 ~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
. .++.+.+|+|+++++++..+. ..| .+++.+
T Consensus 228 ~-----~r~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdG 261 (267)
T 1iy8_A 228 S-----KRYGEAPEIAAVVAFLLSDDASYVNATVVPIDG 261 (267)
T ss_dssp T-----CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred C-----CCCcCHHHHHHHHHHHcCccccCCCCCEEEECC
Confidence 1 458899999999999987542 234 556644
No 184
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=99.90 E-value=1.1e-22 Score=174.77 Aligned_cols=223 Identities=16% Similarity=0.144 Sum_probs=154.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC---CccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---GCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~ 80 (338)
.+|++|||||+|+||++++++|+++|++|++++|+.+.................+..+.+|++|.+++.++++ ++|+
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 88 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI 88 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence 4689999999999999999999999999999999876544433222111112467889999999988877765 7999
Q ss_pred EEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchh
Q 040253 81 VFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLD 151 (338)
Q Consensus 81 vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~ 151 (338)
+||+||..... ..+..+..+++|+.++..+.+++ ++.+ ..++|++||...+.
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~------------------ 149 (267)
T 3t4x_A 89 LINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIM------------------ 149 (267)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTS------------------
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhcc------------------
Confidence 99999965421 11233456899999987776655 3445 67999999987663
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCC---------CCC--hhHHHhhhhcccCC
Q 040253 152 FVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTS---------SMP--PSLITALSPITRNE 217 (338)
Q Consensus 152 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~---------~~~--~~~~~~~~~~~~~~ 217 (338)
+..+...|+.+|.+.+.+.+.++.++ |++++++.||.+..+.... ... .......... ...
T Consensus 150 ----~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 224 (267)
T 3t4x_A 150 ----PSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKEN-RPT 224 (267)
T ss_dssp ----CCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHH-CTT
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhcc-CCc
Confidence 11245689999999999999999886 6999999999987652110 000 0000000000 000
Q ss_pred CCCCCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 218 AHYPIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 218 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
... .++.+.+|+|+++++++.... . +..+++.+
T Consensus 225 ~~~-----~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG 260 (267)
T 3t4x_A 225 SII-----QRLIRPEEIAHLVTFLSSPLSSAINGSALRIDG 260 (267)
T ss_dssp CSS-----CSCBCTHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ccc-----cCccCHHHHHHHHHHHcCccccCccCCeEEECC
Confidence 111 468999999999999987433 2 44667744
No 185
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=99.90 E-value=1.3e-22 Score=175.02 Aligned_cols=215 Identities=18% Similarity=0.149 Sum_probs=154.6
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|++|||||+|+||++++++|+++|++|++++|+.+......... ..++.++.+|++|.+++.++++ +
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI-----GCGAAACRVDVSDEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH-----CSSCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCcceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999999999999999999876555443322 1568999999999988877664 7
Q ss_pred ccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 78 CTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 78 ~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
+|++||+||..... ..+..+..+++|+.++.++.+++.. .+ ..++|++||...+.
T Consensus 104 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~--------------- 167 (277)
T 3gvc_A 104 VDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQV--------------- 167 (277)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS---------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcc---------------
Confidence 89999999865421 2233456889999999998887643 44 57899999976653
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCC-CCCC---
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNE-AHYP--- 221 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 221 (338)
+..+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++.... . .....+.. ....
T Consensus 168 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-----~---~~~~~~~~~~~~~~~~ 232 (277)
T 3gvc_A 168 -------AVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQT-----A---MAMFDGALGAGGARSM 232 (277)
T ss_dssp -------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-----H---HTCC------CCHHHH
T ss_pred -------CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHH-----h---hhcchhhHHHHhhhhh
Confidence 1124568999999999999988887 48999999999998764210 0 00000000 0000
Q ss_pred -CCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 222 -IIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 222 -~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
.....++.+.+|+|+++++++.... . +..+++.+
T Consensus 233 ~~~~~~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdG 270 (277)
T 3gvc_A 233 IARLQGRMAAPEEMAGIVVFLLSDDASMITGTTQIADG 270 (277)
T ss_dssp HHHHHSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred hhccccCCCCHHHHHHHHHHHcCCccCCccCcEEEECC
Confidence 0001358899999999999997543 2 44567754
No 186
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=99.90 E-value=6.5e-23 Score=180.51 Aligned_cols=218 Identities=17% Similarity=0.107 Sum_probs=145.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+++||||||+|+||.+++++|+++|++|++++|+.+................++.++.+|++|.+++.++++
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 3579999999999999999999999999999999877655543322211111378999999999998887764
Q ss_pred CccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHHhCC---------CccEEEEecCceeeeccCCCCCCc
Q 040253 77 GCTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACKNAK---------TVRRLVFTSSAGTLDVEEHRKPVY 142 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~v~~Ss~~v~~~~~~~~~~~ 142 (338)
++|+|||+||.... ...+..+..+++|+.++.++++++.... ...++|++||...+. .
T Consensus 87 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~--~------ 158 (319)
T 3ioy_A 87 PVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFL--A------ 158 (319)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTC--C------
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccccc--C------
Confidence 68999999996432 1223345689999999999988775432 145899999987764 1
Q ss_pred CCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCC--hhHHHhhhhcccCC
Q 040253 143 DETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMP--PSLITALSPITRNE 217 (338)
Q Consensus 143 ~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~~~~ 217 (338)
......|+.||.+.+.+.+.++.++ |+++++++||.|.++....... ..+..........
T Consensus 159 --------------~~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~- 223 (319)
T 3ioy_A 159 --------------AGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKT- 223 (319)
T ss_dssp --------------CSSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-------------------------
T ss_pred --------------CCCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHH-
Confidence 1134589999997777777776554 8999999999998765332110 0000000000000
Q ss_pred CCCCCC-CCC-ccccHHHHHHHHHHhhcCC
Q 040253 218 AHYPII-KQG-QFVHLDDLCSAHIFLFEHP 245 (338)
Q Consensus 218 ~~~~~~-~~~-~~i~v~D~a~~~~~~l~~~ 245 (338)
..... ... ..++.+|+|+.++.+++++
T Consensus 224 -~~~~~~~~~~~~~~pe~vA~~~~~al~~~ 252 (319)
T 3ioy_A 224 -AVERLAGVHEFGMEPDVIGARVIEAMKAN 252 (319)
T ss_dssp ------CCGGGSSBCHHHHHHHHHHHHHTT
T ss_pred -HHHHHHHhhhcCCCHHHHHHHHHHHHHcC
Confidence 00000 001 2389999999999999885
No 187
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=99.90 E-value=2.7e-22 Score=172.36 Aligned_cols=222 Identities=14% Similarity=0.073 Sum_probs=160.1
Q ss_pred CCCcEEEEeCCchh--hHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 3 SIAETVCVTGASGF--IGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
..+|+++||||+|+ ||.+++++|+++|++|++++|+....+....+..... ..++.++.+|++|.+++.++++
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLD-RNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSS-SCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcC-CCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 34689999999998 9999999999999999999998766555555443321 1368999999999998887764
Q ss_pred ---CccEEEEecccCCC---------CCCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcC
Q 040253 77 ---GCTGVFHLATPMDF---------ESKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYD 143 (338)
Q Consensus 77 ---~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~ 143 (338)
++|++||+|+.... ...+.....+++|+.++.++++++...- ...++|++||...+.
T Consensus 84 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~---------- 153 (266)
T 3oig_A 84 QVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGEL---------- 153 (266)
T ss_dssp HHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS----------
T ss_pred HhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccc----------
Confidence 68999999986431 1122334678899999999999887653 135899999987653
Q ss_pred CCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCC
Q 040253 144 ETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHY 220 (338)
Q Consensus 144 e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (338)
+.+....|+.+|.+.+.+.+.++.++ |+++++++||.+..+......... ......... ...
T Consensus 154 ------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~--~~~~~~~~~-~~~ 218 (266)
T 3oig_A 154 ------------VMPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFN--SILKDIEER-APL 218 (266)
T ss_dssp ------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHH--HHHHHHHHH-STT
T ss_pred ------------cCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchH--HHHHHHHhc-CCC
Confidence 11235589999999999999998875 899999999999876533221110 001100011 111
Q ss_pred CCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 221 PIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 221 ~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
.++.+.+|+|+++++++.... . +..+++.+
T Consensus 219 -----~~~~~p~dva~~v~~l~s~~~~~~tG~~i~vdG 251 (266)
T 3oig_A 219 -----RRTTTPEEVGDTAAFLFSDMSRGITGENLHVDS 251 (266)
T ss_dssp -----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -----CCCCCHHHHHHHHHHHcCCchhcCcCCEEEECC
Confidence 357899999999999997533 2 34566643
No 188
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=99.90 E-value=5.4e-23 Score=174.60 Aligned_cols=220 Identities=15% Similarity=0.170 Sum_probs=153.7
Q ss_pred CCC-CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh---C
Q 040253 1 MGS-IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI---R 76 (338)
Q Consensus 1 m~~-~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~ 76 (338)
|.. .+|+|+||||+|+||++++++|+++|++|++++|+.+..... ... .++.++.+|++|++++.+++ .
T Consensus 1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~----~~~~~~~~D~~~~~~~~~~~~~~~ 73 (246)
T 2ag5_A 1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQEL---EKY----PGIQTRVLDVTKKKQIDQFANEVE 73 (246)
T ss_dssp CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGG---GGS----TTEEEEECCTTCHHHHHHHHHHCS
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH---Hhc----cCceEEEeeCCCHHHHHHHHHHhC
Confidence 443 468999999999999999999999999999999975443222 111 36889999999998887654 4
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++.. .+ ..++|++||...+. ..
T Consensus 74 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~~---------- 140 (246)
T 2ag5_A 74 RLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSV--KG---------- 140 (246)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTT--BC----------
T ss_pred CCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCc--CC----------
Confidence 799999999865421 1123446788999999999887643 34 57999999976653 10
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCC--hhHHHhhhhcccCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMP--PSLITALSPITRNEAHYPI 222 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 222 (338)
+.+...|+.+|.+.+.+.+.++.++ |++++++|||.++++....... ............. ...
T Consensus 141 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 208 (246)
T 2ag5_A 141 ---------VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKR-QKT-- 208 (246)
T ss_dssp ---------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHT-CTT--
T ss_pred ---------CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhc-CCC--
Confidence 0134589999999999999998875 8999999999999874211000 0000000000011 111
Q ss_pred CCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
.++.+.+|+|+++++++.... ..| .+++.+
T Consensus 209 ---~~~~~~~dvA~~v~~l~s~~~~~~tG~~i~vdg 241 (246)
T 2ag5_A 209 ---GRFATAEEIAMLCVYLASDESAYVTGNPVIIDG 241 (246)
T ss_dssp ---SSCEEHHHHHHHHHHHHSGGGTTCCSCEEEECT
T ss_pred ---CCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 358899999999999986533 234 556644
No 189
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=99.90 E-value=3e-23 Score=178.15 Aligned_cols=220 Identities=18% Similarity=0.127 Sum_probs=156.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+||||||+|+||.+++++|+++|++|++++|+.+............ ...++.++.+|++|.+++.++++
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 97 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ-FGTDVHTVAIDLAEPDAPAELARRAAEAFG 97 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-HCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-cCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3589999999999999999999999999999999876554433221110 01578999999999998887764
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++.++.+++... +...++|++||...+.
T Consensus 98 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~-------------- 163 (266)
T 4egf_A 98 GLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALA-------------- 163 (266)
T ss_dssp SCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--------------
T ss_pred CCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhcc--------------
Confidence 799999999965421 12234567899999999998877432 2135899999987663
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCC-ChhHHHhhhhcccCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSM-PPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+..+...... ..... ... ....+.
T Consensus 164 --------~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~---~~~-~~~~p~--- 228 (266)
T 4egf_A 164 --------PLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKS---APM-IARIPL--- 228 (266)
T ss_dssp --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHH---HHH-HTTCTT---
T ss_pred --------CCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHH---HHH-HhcCCC---
Confidence 11245689999999999999998874 899999999999876321100 00000 000 111111
Q ss_pred CCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
.++...+|+|+++++++.... . +..+++.+
T Consensus 229 --~r~~~p~dva~~v~~L~s~~~~~itG~~i~vdG 261 (266)
T 4egf_A 229 --GRFAVPHEVSDAVVWLASDAASMINGVDIPVDG 261 (266)
T ss_dssp --SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred --CCCcCHHHHHHHHHHHhCchhcCccCcEEEECC
Confidence 468899999999999987533 2 44566644
No 190
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=99.90 E-value=9.3e-23 Score=176.31 Aligned_cols=221 Identities=17% Similarity=0.127 Sum_probs=156.3
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|++|||||+|+||.+++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++ +
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRA--AGHDVDGSSCDVTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHT--TTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 57899999999999999999999999999999987655544332221 12578999999999998877664 6
Q ss_pred ccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh------CCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 78 CTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN------AKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 78 ~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~------~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
+|++||+||..... ..+..+..+++|+.++.++.+++.. .+ ..++|++||...+.
T Consensus 102 id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~------------- 167 (279)
T 3sju_A 102 IGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQ------------- 167 (279)
T ss_dssp CCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTS-------------
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhcc-------------
Confidence 89999999965421 1223346788999999999988754 34 57999999987653
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCC-------CChhHHHhhhhcccC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSS-------MPPSLITALSPITRN 216 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~ 216 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+.++..... ............ ..
T Consensus 168 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 237 (279)
T 3sju_A 168 ---------GVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERF-NA 237 (279)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHH-HT
T ss_pred ---------CCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHH-Hh
Confidence 11244589999999999999999884 89999999999977531100 000000000000 11
Q ss_pred CCCCCCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEecC
Q 040253 217 EAHYPIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSSH 256 (338)
Q Consensus 217 ~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~~ 256 (338)
.... .++.+++|+|+++++++.... . +..+++.++
T Consensus 238 ~~p~-----~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG 275 (279)
T 3sju_A 238 KIPL-----GRYSTPEEVAGLVGYLVTDAAASITAQALNVCGG 275 (279)
T ss_dssp TCTT-----SSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTT
T ss_pred cCCC-----CCCCCHHHHHHHHHHHhCccccCcCCcEEEECCC
Confidence 1111 468899999999999987543 2 445666543
No 191
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=99.89 E-value=7.5e-23 Score=173.76 Aligned_cols=216 Identities=18% Similarity=0.156 Sum_probs=156.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+++||||+|+||.+++++|+++|++|++++|+.+......... ..++.++.+|++|.+++.++++
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI-----GKKARAIAADISDPGSVKALFAEIQALTG 79 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 4689999999999999999999999999999999876555443322 1578999999999998887765
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHH----HHhCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRA----CKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++.++.++ +++.+...++|++||...+.
T Consensus 80 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------- 145 (247)
T 3rwb_A 80 GIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFA-------------- 145 (247)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHH--------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhcc--------------
Confidence 799999999965421 1223456889999999999887 44433247999999987664
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+..+...|+.+|.+.+.+.+.++.+ +|+++++++||.+..+............... .....
T Consensus 146 --------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~----~~~~~---- 209 (247)
T 3rwb_A 146 --------GTPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVE----MLQAM---- 209 (247)
T ss_dssp --------TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHH----HHSSS----
T ss_pred --------CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHh----ccccc----
Confidence 1124568999999999999999888 4899999999999875322110100000000 00011
Q ss_pred CCccccHHHHHHHHHHhhcCCCC--CC-ceEEec
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPNA--KG-RYICSS 255 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~~--~~-~~~~~~ 255 (338)
.++...+|+|+++.+++..... .| .+++.+
T Consensus 210 -~r~~~pedva~~v~~L~s~~~~~itG~~i~vdG 242 (247)
T 3rwb_A 210 -KGKGQPEHIADVVSFLASDDARWITGQTLNVDA 242 (247)
T ss_dssp -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -CCCcCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 3578899999999999875432 34 556654
No 192
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=99.89 E-value=3.7e-23 Score=177.86 Aligned_cols=217 Identities=18% Similarity=0.155 Sum_probs=156.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+.+..+......... ..++..+.+|++|.+++.++++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA--GLEGRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--TCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999999999876554443322111 1467899999999988887765
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++.++++++.. .+ ..++|++||...+.
T Consensus 105 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-------------- 169 (270)
T 3ftp_A 105 ALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSA-------------- 169 (270)
T ss_dssp CCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCC--------------
Confidence 799999999864421 2233456789999999999887742 33 46899999987663
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+..+.... ......... ......
T Consensus 170 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~----~~~~p~---- 232 (270)
T 3ftp_A 170 --------GNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKG-LPQEQQTAL----KTQIPL---- 232 (270)
T ss_dssp --------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHH-SCHHHHHHH----HTTCTT----
T ss_pred --------CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhh-cCHHHHHHH----HhcCCC----
Confidence 11245689999999999999998874 8999999999997653211 111111111 111111
Q ss_pred CCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
.++.+.+|+|+++++++.... .+..+++.+
T Consensus 233 -~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 265 (270)
T 3ftp_A 233 -GRLGSPEDIAHAVAFLASPQAGYITGTTLHVNG 265 (270)
T ss_dssp -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -CCCCCHHHHHHHHHHHhCCCcCCccCcEEEECC
Confidence 468899999999999986433 244667754
No 193
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=99.89 E-value=1.7e-22 Score=174.32 Aligned_cols=220 Identities=14% Similarity=0.128 Sum_probs=158.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|++|||||+|+||++++++|+++|++|++++|+.+..+.+...... ...++.++.+|++|.+++.++++
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAG--VGGKALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHH--TTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 468999999999999999999999999999999987765554432221 12478899999999998888775
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++.++++++... +...++|++||.+.+. ..
T Consensus 109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~--~~---------- 176 (276)
T 3r1i_A 109 GIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHI--IN---------- 176 (276)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--CC----------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcc--cC----------
Confidence 799999999965422 12233456789999999998877542 2126899999976553 10
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
...+...|+.+|.+.+.+.+.++.+ +|+++++++||.+..+..... .. .. ... ......
T Consensus 177 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~~-~~---~~~-~~~~p~---- 238 (276)
T 3r1i_A 177 --------IPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPL-AD-YH---ALW-EPKIPL---- 238 (276)
T ss_dssp --------CSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGG-GG-GH---HHH-GGGSTT----
T ss_pred --------CCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccc-hH-HH---HHH-HhcCCC----
Confidence 1124568999999999999999988 489999999999987653211 11 11 100 111111
Q ss_pred CCccccHHHHHHHHHHhhcCCC--C-CCceEEecC
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSSH 256 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~~ 256 (338)
.++...+|+|+++++++.... . +..+++.+.
T Consensus 239 -~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG 272 (276)
T 3r1i_A 239 -GRMGRPEELTGLYLYLASAASSYMTGSDIVIDGG 272 (276)
T ss_dssp -SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred -CCCcCHHHHHHHHHHHcCccccCccCcEEEECcC
Confidence 458899999999999997533 2 345666543
No 194
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=99.89 E-value=1.4e-22 Score=173.93 Aligned_cols=222 Identities=14% Similarity=0.149 Sum_probs=157.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|++|||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++ +
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTD--TGRRALSVGTDITDDAQVAHLVDETMKAYGR 88 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 58999999999999999999999999999999987655544332211 12578999999999998877764 7
Q ss_pred ccEEEEecccCCC------CCCCccchhhhhhhHHHHHHHHHHHhCC--CccEEEEecCceeeeccCCCCCCcCCCCCCc
Q 040253 78 CTGVFHLATPMDF------ESKDPENEVIRPTINGMVSIMRACKNAK--TVRRLVFTSSAGTLDVEEHRKPVYDETSWSD 149 (338)
Q Consensus 78 ~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~ 149 (338)
+|++||+||.... ...+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 89 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~---------------- 152 (264)
T 3ucx_A 89 VDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRH---------------- 152 (264)
T ss_dssp CSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGC----------------
T ss_pred CcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhcc----------------
Confidence 8999999986421 1112345678999999999998865431 025999999987663
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChh-------HHHhhhhcccCCCC
Q 040253 150 LDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPS-------LITALSPITRNEAH 219 (338)
Q Consensus 150 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~-------~~~~~~~~~~~~~~ 219 (338)
+..+...|+.+|...+.+.+.++.+ +|+++++++||.++++......... ........ .....
T Consensus 153 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p 225 (264)
T 3ucx_A 153 ------SQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAA-AAGSD 225 (264)
T ss_dssp ------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHH-HTTSS
T ss_pred ------CCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHH-hccCC
Confidence 1124558999999999999999887 5899999999999876421100000 00000000 11111
Q ss_pred CCCCCCCccccHHHHHHHHHHhhcCCC---CCCceEEecC
Q 040253 220 YPIIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSSH 256 (338)
Q Consensus 220 ~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~~ 256 (338)
. .++.+.+|+|+++++++.... .+..+++.+.
T Consensus 226 ~-----~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 260 (264)
T 3ucx_A 226 L-----KRLPTEDEVASAILFMASDLASGITGQALDVNCG 260 (264)
T ss_dssp S-----SSCCBHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred c-----ccCCCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 1 468899999999999987533 2446677543
No 195
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=99.89 E-value=1.1e-22 Score=176.65 Aligned_cols=238 Identities=15% Similarity=0.106 Sum_probs=159.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc---------HHHHHHHhc-CCCCCCcEEEEecccCCCCCchh
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN---------KKKVKHLLE-LPKASTHLTLWKADLAEEGNFDE 73 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~---------~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~ 73 (338)
.+|+||||||+|+||.+++++|+++|++|++++|+... ...++.... ......++.++.+|++|.+++.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 36899999999999999999999999999999987221 122211110 01112578999999999998877
Q ss_pred hhC-------CccEEEEecccCCCC---CCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCc
Q 040253 74 PIR-------GCTGVFHLATPMDFE---SKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVY 142 (338)
Q Consensus 74 ~~~-------~~d~vi~~a~~~~~~---~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~ 142 (338)
+++ ++|++||+||..... ..+..+..+++|+.++.++++++...- ...++|++||...+... ...+.
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~--~~~~~ 166 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAA--AQPPG 166 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHH--HCCC-
T ss_pred HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccc--ccccc
Confidence 765 799999999975422 233445789999999999999987652 24689999998776421 11122
Q ss_pred CCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCC-
Q 040253 143 DETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEA- 218 (338)
Q Consensus 143 ~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~- 218 (338)
.+.. +..+...|+.+|.+.+.+.+.++.++ |+++++++||.+.++..... ..............
T Consensus 167 ~~~~---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~ 234 (287)
T 3pxx_A 167 AGGP---------QGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSA---PMYRQFRPDLEAPSR 234 (287)
T ss_dssp -------------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSH---HHHHHHCTTSSSCCH
T ss_pred cccc---------CCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccc---chhhhhccccccchh
Confidence 2222 11244589999999999999999886 89999999999988754320 00000000000000
Q ss_pred -------CCCCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 219 -------HYPIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 219 -------~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
........++.+.+|+|+++++++.... . +..+++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdG 281 (287)
T 3pxx_A 235 ADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDA 281 (287)
T ss_dssp HHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECc
Confidence 0000001568999999999999986533 2 44566644
No 196
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=99.89 E-value=3.4e-23 Score=175.79 Aligned_cols=209 Identities=16% Similarity=0.169 Sum_probs=135.8
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCC---CCchhhh--
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEE---GNFDEPI-- 75 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~-- 75 (338)
|+..+|++|||||+|+||++++++|++ |++|++++|+.+....... . .++.++.+|+++. +.+.+.+
T Consensus 1 m~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~---~----~~~~~~~~D~~~~~~~~~~~~~~~~ 72 (245)
T 3e9n_A 1 MSLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE---I----EGVEPIESDIVKEVLEEGGVDKLKN 72 (245)
T ss_dssp -----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT---S----TTEEEEECCHHHHHHTSSSCGGGTT
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh---h----cCCcceecccchHHHHHHHHHHHHh
Confidence 666789999999999999999999987 8999999998665544432 1 4689999999876 3333333
Q ss_pred -CCccEEEEecccCCCCC-----CCccchhhhhhhHHHHHHHHHHHhCC--CccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 76 -RGCTGVFHLATPMDFES-----KDPENEVIRPTINGMVSIMRACKNAK--TVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 76 -~~~d~vi~~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
.++|+|||+||...... .+..+..+++|+.++.++.+++...- ...++|++||...+.
T Consensus 73 ~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~-------------- 138 (245)
T 3e9n_A 73 LDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNG-------------- 138 (245)
T ss_dssp CSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC--------------------
T ss_pred cCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCccccc--------------
Confidence 37999999998654221 12234678899999888877764321 025899999988774
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+..+...|+.+|.+.+.+++.++.+ .|+++++++||.+.++........ .+.. + .
T Consensus 139 --------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~---------~~~~--~---~ 196 (245)
T 3e9n_A 139 --------PHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS---------QGTN--F---R 196 (245)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------C
T ss_pred --------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh---------hhcc--c---c
Confidence 1124568999999999999999887 489999999999987653211100 0000 0 1
Q ss_pred CCccccHHHHHHHHHHhhcCCCCCCceEE
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPNAKGRYIC 253 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~~~~~~~~ 253 (338)
...+++.+|+|++++.+++.+..+.++++
T Consensus 197 ~~~~~~p~dvA~~i~~l~~~~~~~~~~~i 225 (245)
T 3e9n_A 197 PEIYIEPKEIANAIRFVIDAGETTQITNV 225 (245)
T ss_dssp CGGGSCHHHHHHHHHHHHTSCTTEEEEEE
T ss_pred cccCCCHHHHHHHHHHHHcCCCccceeee
Confidence 14588999999999999998877777765
No 197
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.89 E-value=3.7e-23 Score=180.34 Aligned_cols=239 Identities=16% Similarity=0.149 Sum_probs=161.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHH-HhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKH-LLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|++|||||+|+||++++++|+++|++|++++|+.+....... +........++.++.+|++|++++.++++
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999999998765444322 21111000178999999999998887764
Q ss_pred -CccEEEEecccCCCCC-------CCccchhhhhhhHHHHHHHHHHHhCC--CccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 -GCTGVFHLATPMDFES-------KDPENEVIRPTINGMVSIMRACKNAK--TVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~~-------~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|+|||+||...... .+..+..+++|+.++.++++++...- ...++|++||...+. ..
T Consensus 105 g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~--~~--------- 173 (297)
T 1xhl_A 105 GKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGP--QA--------- 173 (297)
T ss_dssp SCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSS--SC---------
T ss_pred CCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhcc--CC---------
Confidence 7999999998643211 12344688999999999988876431 016999999987663 10
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCC-Chh----HHHhhhhcccCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSM-PPS----LITALSPITRNEA 218 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~-~~~----~~~~~~~~~~~~~ 218 (338)
..+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++...... ... ........ ....
T Consensus 174 ----------~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 242 (297)
T 1xhl_A 174 ----------HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSR-KECI 242 (297)
T ss_dssp ----------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHC-TTTC
T ss_pred ----------CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHH-HhcC
Confidence 013458999999999999998876 4899999999999886421110 000 00001111 1111
Q ss_pred CCCCCCCCccccHHHHHHHHHHhhcCC---CC-CCceEEec-CCCCHHHHHHHHHH
Q 040253 219 HYPIIKQGQFVHLDDLCSAHIFLFEHP---NA-KGRYICSS-HPATILELAKFLRE 269 (338)
Q Consensus 219 ~~~~~~~~~~i~v~D~a~~~~~~l~~~---~~-~~~~~~~~-~~~t~~e~~~~i~~ 269 (338)
.. .++...+|+|+++++++... .. +..+++.+ ......+.+..+.+
T Consensus 243 p~-----~r~~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~ 293 (297)
T 1xhl_A 243 PV-----GHCGKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMS 293 (297)
T ss_dssp TT-----SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred CC-----CCCcCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhh
Confidence 11 45899999999999998754 23 44566644 44555554444433
No 198
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.89 E-value=2.6e-22 Score=170.24 Aligned_cols=214 Identities=16% Similarity=0.158 Sum_probs=153.7
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
|...+|+++||||+|+||++++++|+++|++|++++|+.+........ .++.++.+|++|++++.++++
T Consensus 1 m~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-------~~~~~~~~D~~~~~~~~~~~~~~~~ 73 (245)
T 1uls_A 1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA-------VGAHPVVMDVADPASVERGFAEALA 73 (245)
T ss_dssp CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-------TTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-------cCCEEEEecCCCHHHHHHHHHHHHH
Confidence 666678999999999999999999999999999999986544433221 137889999999988877664
Q ss_pred ---CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCC
Q 040253 77 ---GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDE 144 (338)
Q Consensus 77 ---~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e 144 (338)
++|++||+||..... ..+..+..+++|+.++.++.+++.. .+ ..++|++||...++ .
T Consensus 74 ~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~---~------- 142 (245)
T 1uls_A 74 HLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRVYLG---N------- 142 (245)
T ss_dssp HHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGGGGC---C-------
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccchhcC---C-------
Confidence 589999999864321 1123346788999999999887654 24 57999999987322 1
Q ss_pred CCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCC
Q 040253 145 TSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYP 221 (338)
Q Consensus 145 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (338)
.+...|+.+|...+.+.+.++.+. |+++++++||.+..+.... .......... .. ...
T Consensus 143 -------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~~---~~-~p~- 203 (245)
T 1uls_A 143 -------------LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAK-VPEKVREKAI---AA-TPL- 203 (245)
T ss_dssp -------------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSS-SCHHHHHHHH---HT-CTT-
T ss_pred -------------CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhh-cCHHHHHHHH---hh-CCC-
Confidence 134589999999999999888774 8999999999998765322 1111111110 11 111
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
..+.+.+|+|++++.++.... ..| .+.+.+
T Consensus 204 ----~~~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdg 236 (245)
T 1uls_A 204 ----GRAGKPLEVAYAALFLLSDESSFITGQVLFVDG 236 (245)
T ss_dssp ----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ----CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECC
Confidence 348899999999999987532 234 455644
No 199
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=99.89 E-value=4.3e-23 Score=178.60 Aligned_cols=211 Identities=18% Similarity=0.168 Sum_probs=147.6
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|+||||||+|+||++++++|+++|++|++++|+......+...........++.++.+|++|++++.++++ +
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 111 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSG 111 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 578999999999999999999999999999999866544433222111111468899999999998877765 7
Q ss_pred ccEEEEecccCCCC-----CCCccchhhhhhhHH----HHHHHHHHHhCCCc--cEEEEecCceeeeccCCCCCCcCCCC
Q 040253 78 CTGVFHLATPMDFE-----SKDPENEVIRPTING----MVSIMRACKNAKTV--RRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 78 ~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~----~~~l~~~~~~~~~~--~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
+|+|||+||..... ..+..+..+++|+.+ +..+++.+++.+ . .++|++||...+. ..
T Consensus 112 iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~-~~~g~iv~isS~~~~~--~~--------- 179 (279)
T 1xg5_A 112 VDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERN-VDDGHIININSMSGHR--VL--------- 179 (279)
T ss_dssp CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCSCEEEEECCGGGTS--CC---------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCCceEEEEcChhhcc--cC---------
Confidence 99999999864321 112345678899999 666667777665 4 7999999987663 10
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH-----cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE-----NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYP 221 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (338)
+..+...|+.+|.+.+.+++.++.+ .++++++++||.+.++............... ..
T Consensus 180 ---------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~---~~----- 242 (279)
T 1xg5_A 180 ---------PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAA---TY----- 242 (279)
T ss_dssp ---------SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHH---HH-----
T ss_pred ---------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhh---hc-----
Confidence 1124558999999999988888765 3799999999999775410000000000000 00
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCC
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~ 246 (338)
....+++.+|+|++++.++..+.
T Consensus 243 --~~~~~~~~~dvA~~i~~l~~~~~ 265 (279)
T 1xg5_A 243 --EQMKCLKPEDVAEAVIYVLSTPA 265 (279)
T ss_dssp --C---CBCHHHHHHHHHHHHHSCT
T ss_pred --ccccCCCHHHHHHHHHHHhcCCc
Confidence 01357899999999999998654
No 200
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=99.89 E-value=5.2e-23 Score=176.45 Aligned_cols=209 Identities=16% Similarity=0.140 Sum_probs=151.1
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|+||||||+|+||++++++|+++|++|++++|+.+.. .++.++.+|++|.+++.++++ +
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 74 (264)
T 2dtx_A 8 DKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGE-------------AKYDHIECDVTNPDQVKASIDHIFKEYGS 74 (264)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCS-------------CSSEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccC-------------CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 58999999999999999999999999999999986541 467899999999998887765 6
Q ss_pred ccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 78 CTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 78 ~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
+|+|||+||..... ..+..+..+++|+.++.++++++.. .+ ..++|++||...+.
T Consensus 75 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--------------- 138 (264)
T 2dtx_A 75 ISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASI--------------- 138 (264)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTS---------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhcc---------------
Confidence 99999999864421 1223456889999999888887753 33 57999999987663
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHHcC--ccEEEEcCCceeCCCCCCCC------Chh-HHHhhhhcccCCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENN--IDFISIIPSLVVGPFLTSSM------PPS-LITALSPITRNEAH 219 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilRp~~v~G~~~~~~~------~~~-~~~~~~~~~~~~~~ 219 (338)
+..+...|+.+|...+.+.+.++.+++ +++++++||.+.++...... ... ........ .....
T Consensus 139 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p 210 (264)
T 2dtx_A 139 -------ITKNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEW-GHEHP 210 (264)
T ss_dssp -------CCTTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHH-HHHST
T ss_pred -------CCCCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHH-HhcCC
Confidence 112456899999999999999998865 99999999999765311000 000 00000000 00011
Q ss_pred CCCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 220 YPIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 220 ~~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
. .++++++|+|++++.++.... . +..+++.+
T Consensus 211 ~-----~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG 244 (264)
T 2dtx_A 211 M-----QRIGKPQEVASAVAFLASREASFITGTCLYVDG 244 (264)
T ss_dssp T-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred C-----CCCcCHHHHHHHHHHHhCchhcCCCCcEEEECC
Confidence 1 458999999999999987542 2 33556644
No 201
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=2.7e-22 Score=171.52 Aligned_cols=222 Identities=17% Similarity=0.153 Sum_probs=151.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCC-CcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDP-DNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|++|||||+|+||.+++++|+++|++|++++++. +........... ...++.++.+|++|.+++.++++
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEK--LGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHT--TTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh--cCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 468999999999999999999999999999985543 333332222211 12578999999999998887765
Q ss_pred -CccEEEEecccCC-CC-----CCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 77 -GCTGVFHLATPMD-FE-----SKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 77 -~~d~vi~~a~~~~-~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
++|++||+||... .. ..+..+..+++|+.++.++.+++...- ...++|++||...+. .
T Consensus 85 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~--~------------ 150 (259)
T 3edm_A 85 GEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRD--G------------ 150 (259)
T ss_dssp CSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHH--C------------
T ss_pred CCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhcc--C------------
Confidence 7999999998542 11 112235678999999999999987764 124899999987662 0
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHHcC--ccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENN--IDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQG 226 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (338)
+..+...|+.+|.+.+.+.+.++.+++ ++++++.||.+..+........... ... ..... ..
T Consensus 151 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~---~~~-~~~~p-----~~ 214 (259)
T 3edm_A 151 -------GGPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVR---ERV-AGATS-----LK 214 (259)
T ss_dssp -------CSTTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC-------------------------------
T ss_pred -------CCCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHH---HHH-HhcCC-----CC
Confidence 112455899999999999999998863 9999999999987643221100000 000 00011 14
Q ss_pred ccccHHHHHHHHHHhhcCCC---CCCceEEecCC
Q 040253 227 QFVHLDDLCSAHIFLFEHPN---AKGRYICSSHP 257 (338)
Q Consensus 227 ~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~~~ 257 (338)
++.+.+|+|+++++++.... .+..+++.+..
T Consensus 215 r~~~pedva~~v~~L~s~~~~~itG~~i~vdGg~ 248 (259)
T 3edm_A 215 REGSSEDVAGLVAFLASDDAAYVTGACYDINGGV 248 (259)
T ss_dssp CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESBCS
T ss_pred CCcCHHHHHHHHHHHcCccccCccCCEEEECCCc
Confidence 68899999999999987543 24467775543
No 202
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=99.89 E-value=3.2e-23 Score=178.23 Aligned_cols=231 Identities=15% Similarity=0.093 Sum_probs=152.7
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|+|+||||+|+||++++++|+++|++|++++|+.+................++.++.+|++|++++.++++ +
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR 86 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 479999999999999999999999999999999865544332222111112468999999999988887764 5
Q ss_pred ccEEEEecccCCCCCCCccchhhhhhhHHHHHHH----HHHHhCC--CccEEEEecCceeeeccCCCCCCcCCCCCCchh
Q 040253 78 CTGVFHLATPMDFESKDPENEVIRPTINGMVSIM----RACKNAK--TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLD 151 (338)
Q Consensus 78 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~----~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~ 151 (338)
+|+|||+||... .+..+..+++|+.++..+. +.+++.+ ...++|++||...+. .
T Consensus 87 id~lv~~Ag~~~---~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~--------------- 146 (267)
T 2gdz_A 87 LDILVNNAGVNN---EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLM--P--------------- 146 (267)
T ss_dssp CCEEEECCCCCC---SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTS--C---------------
T ss_pred CCEEEECCCCCC---hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccC--C---------------
Confidence 899999999653 2445678899998665554 4444432 147899999987764 1
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHH--H---HcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCC
Q 040253 152 FVRSVKMTGWMYFVSKTLAEQAAWKFA--E---ENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQG 226 (338)
Q Consensus 152 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~--~---~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (338)
..+...|+.+|...+.+.+.++ . ..|+++++++||.+.++.................... ........
T Consensus 147 -----~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 219 (267)
T 2gdz_A 147 -----VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDH--IKDMIKYY 219 (267)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHH--HHHHHHHH
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHH--HHHHhccc
Confidence 1134589999999999888742 2 3589999999999977632110000000000000000 00000013
Q ss_pred ccccHHHHHHHHHHhhcCCCCCC-ceEEec-CCCCHHH
Q 040253 227 QFVHLDDLCSAHIFLFEHPNAKG-RYICSS-HPATILE 262 (338)
Q Consensus 227 ~~i~v~D~a~~~~~~l~~~~~~~-~~~~~~-~~~t~~e 262 (338)
.+++.+|+|++++.++......| .+++++ ...++.|
T Consensus 220 ~~~~~~dvA~~v~~l~s~~~~~G~~~~v~gg~~~~~~~ 257 (267)
T 2gdz_A 220 GILDPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD 257 (267)
T ss_dssp CCBCHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred cCCCHHHHHHHHHHHhcCcCCCCcEEEecCCCcccccC
Confidence 47899999999999998654444 677754 5455444
No 203
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=99.89 E-value=4.1e-23 Score=178.01 Aligned_cols=198 Identities=11% Similarity=0.045 Sum_probs=148.5
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKG--LGAKVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHh--cCCeEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 468999999999999999999999999999999986554443222111 12478999999999988877664
Q ss_pred CccEEEEecccCCCCC-----CCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFES-----KDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~~-----~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|+|||+||...... .+..+..+++|+.++.++++++. +.+ ..+||++||...+..
T Consensus 108 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~------------- 173 (272)
T 1yb1_A 108 DVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVS------------- 173 (272)
T ss_dssp CCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCC-------------
T ss_pred CCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCC-------------
Confidence 7899999998654221 12234678899999887776653 345 689999999877641
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc------CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN------NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYP 221 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~------~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (338)
..+...|+.+|.+.+.+++.++.++ |++++++|||.+.++.... .. ..
T Consensus 174 ---------~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~----~~-----------~~-- 227 (272)
T 1yb1_A 174 ---------VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN----PS-----------TS-- 227 (272)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC----TH-----------HH--
T ss_pred ---------CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc----cc-----------cc--
Confidence 1134589999999999999988774 8999999999998765211 00 00
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCC
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~ 246 (338)
..++++.+|+|++++.++..+.
T Consensus 228 ---~~~~~~~~dva~~i~~~~~~~~ 249 (272)
T 1yb1_A 228 ---LGPTLEPEEVVNRLMHGILTEQ 249 (272)
T ss_dssp ---HCCCCCHHHHHHHHHHHHHTTC
T ss_pred ---ccCCCCHHHHHHHHHHHHHcCC
Confidence 1357899999999999998753
No 204
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=99.89 E-value=1.1e-22 Score=173.94 Aligned_cols=216 Identities=19% Similarity=0.220 Sum_probs=152.4
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
|...+|++|||||+|+||.+++++|+++|++|++++|+.+.. .+.+ ..++.++.+|++|.+++.++++
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~--~~~~------~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDV--VADL------GDRARFAAADVTDEAAVASALDLAET 76 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHH--HHHT------CTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHH--HHhc------CCceEEEECCCCCHHHHHHHHHHHHH
Confidence 334568999999999999999999999999999999954322 1211 1578999999999998887775
Q ss_pred --CccEEEEecccCCC---------CCCCccchhhhhhhHHHHHHHHHHHhC-----------CCccEEEEecCceeeec
Q 040253 77 --GCTGVFHLATPMDF---------ESKDPENEVIRPTINGMVSIMRACKNA-----------KTVRRLVFTSSAGTLDV 134 (338)
Q Consensus 77 --~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~-----------~~~~~~v~~Ss~~v~~~ 134 (338)
++|++||+||.... ...+..+..+++|+.++.++++++... +...++|++||...+.
T Consensus 77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~- 155 (257)
T 3tl3_A 77 MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFD- 155 (257)
T ss_dssp HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--C-
T ss_pred hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcC-
Confidence 89999999985421 223345678999999999998887542 1145899999987763
Q ss_pred cCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhh
Q 040253 135 EEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALS 211 (338)
Q Consensus 135 ~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~ 211 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+..+.... ..........
T Consensus 156 ---------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~-~~~~~~~~~~ 213 (257)
T 3tl3_A 156 ---------------------GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS-LPEEARASLG 213 (257)
T ss_dssp ---------------------CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC----CHHHHHHHH
T ss_pred ---------------------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh-ccHHHHHHHH
Confidence 11134589999999999999988874 8999999999998775432 1111111111
Q ss_pred hcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCCCCC-ceEEec
Q 040253 212 PITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPNAKG-RYICSS 255 (338)
Q Consensus 212 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~-~~~~~~ 255 (338)
...... .++.+.+|+|++++++++.+...| .+++.+
T Consensus 214 ---~~~~~~-----~r~~~p~dva~~v~~l~s~~~itG~~i~vdG 250 (257)
T 3tl3_A 214 ---KQVPHP-----SRLGNPDEYGALAVHIIENPMLNGEVIRLDG 250 (257)
T ss_dssp ---HTSSSS-----CSCBCHHHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred ---hcCCCC-----CCccCHHHHHHHHHHHhcCCCCCCCEEEECC
Confidence 111110 358899999999999998755555 456643
No 205
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.89 E-value=4.5e-22 Score=170.87 Aligned_cols=219 Identities=16% Similarity=0.120 Sum_probs=152.5
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHh-cCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLL-ELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+.+......... .. ...++.++.+|++|.+++.++++
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK--YGVETMAFRCDVSNYEEVKKLLEAVKEKF 97 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--HCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999999865544332211 10 01468889999999988877765
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCce-eeeccCCCCCCcCCC
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAG-TLDVEEHRKPVYDET 145 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~-v~~~~~~~~~~~~e~ 145 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||.. ...
T Consensus 98 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~------------ 164 (267)
T 1vl8_A 98 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEV------------ 164 (267)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCC------------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhcc------------
Confidence 799999999865421 112234678899999999888763 344 67999999976 221
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPI 222 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (338)
+..+...|+.+|...+.+++.++.++ |+++++++||.+.++........ .......... ...
T Consensus 165 ----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~-~p~-- 229 (267)
T 1vl8_A 165 ----------TMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSD--PEKLDYMLKR-IPL-- 229 (267)
T ss_dssp ----------CSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTC--HHHHHHHHHT-CTT--
T ss_pred ----------CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccC--hHHHHHHHhh-CCC--
Confidence 11244589999999999999988774 89999999999977642110000 0000000011 111
Q ss_pred CCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
.++++.+|+|+++++++.... ..| .+.+.+
T Consensus 230 ---~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG 262 (267)
T 1vl8_A 230 ---GRTGVPEDLKGVAVFLASEEAKYVTGQIIFVDG 262 (267)
T ss_dssp ---SSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ---CCCcCHHHHHHHHHHHcCccccCCcCCeEEECC
Confidence 358899999999999987532 234 455543
No 206
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=99.89 E-value=3.7e-22 Score=168.70 Aligned_cols=210 Identities=21% Similarity=0.238 Sum_probs=150.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|+++||||+|+||++++++|+++|++|++++|+.+.. .+.+ ++..+.+|++| +++.++++ +
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~--~~~~--------~~~~~~~D~~~-~~~~~~~~~~~~~~g~ 70 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA--AQSL--------GAVPLPTDLEK-DDPKGLVKRALEALGG 70 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHH--HHHH--------TCEEEECCTTT-SCHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH--HHhh--------CcEEEecCCch-HHHHHHHHHHHHHcCC
Confidence 57999999999999999999999999999999987542 1111 26889999999 88776553 7
Q ss_pred ccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 78 CTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 78 ~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
+|++||+||..... ..+..+..+++|+.++.++.+++. +.+ ..++|++||...+...
T Consensus 71 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~------------- 136 (239)
T 2ekp_A 71 LHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAG------------- 136 (239)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCC-------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCC-------------
Confidence 99999999864321 122345678899999998888773 344 6799999998776411
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCC-ChhHHHhhhhcccCCCCCCCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSM-PPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
...+...|+.+|.+.+.+.+.++.++ |++++++|||.+.++...... .... ...... ....
T Consensus 137 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~---~~~~~~-~~p~---- 201 (239)
T 2ekp_A 137 -------GPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPEL---YEPITA-RIPM---- 201 (239)
T ss_dssp -------TTSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHH---HHHHHT-TCTT----
T ss_pred -------CCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHH---HHHHHh-cCCC----
Confidence 00245689999999999999998875 899999999999876421100 0000 010111 1111
Q ss_pred CCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
.++...+|+|++++.++.... ..| .+++.+
T Consensus 202 -~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdg 234 (239)
T 2ekp_A 202 -GRWARPEEIARVAAVLCGDEAEYLTGQAVAVDG 234 (239)
T ss_dssp -SSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred -CCCcCHHHHHHHHHHHcCchhcCCCCCEEEECC
Confidence 358899999999999987532 234 455644
No 207
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=99.89 E-value=5.5e-23 Score=179.63 Aligned_cols=213 Identities=17% Similarity=0.060 Sum_probs=149.8
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|+||||||+|+||.+++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++ +
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRG--QGFDAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--cCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 57899999999999999999999999999999987665544332211 12578999999999998887765 7
Q ss_pred ccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 78 CTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 78 ~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
+|+|||+||.... ...+..+..+++|+.++.++++++.. .+...++|++||...+.
T Consensus 109 id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--------------- 173 (301)
T 3tjr_A 109 VDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLV--------------- 173 (301)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTS---------------
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcC---------------
Confidence 9999999996532 12233456889999999999988643 22136899999987663
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhh---hcccCC-CCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALS---PITRNE-AHYP 221 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~---~~~~~~-~~~~ 221 (338)
+..+...|+.||.+.+.+.+.++.++ |+++++++||.+..+... ....... .....+ ..+.
T Consensus 174 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-----~~~~~~~~~~~~~~~~~~~~~ 241 (301)
T 3tjr_A 174 -------PNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVS-----NSERIRGADYGMSATPEGAFG 241 (301)
T ss_dssp -------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHH-----HHHHHC---------------
T ss_pred -------CCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCcccccccc-----ccccccchhhccccChhhhcc
Confidence 11245689999999999999988875 899999999988765311 0000000 000000 0111
Q ss_pred C-CCCCccccHHHHHHHHHHhhcCCC
Q 040253 222 I-IKQGQFVHLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 222 ~-~~~~~~i~v~D~a~~~~~~l~~~~ 246 (338)
. ....++++++|+|++++.+++++.
T Consensus 242 ~~~~~~~~~~pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 242 PLPTQDESVSADDVARLTADAILANR 267 (301)
T ss_dssp -------CCCHHHHHHHHHHHHHHTC
T ss_pred ccccccCCCCHHHHHHHHHHHHhcCC
Confidence 1 112468999999999999998753
No 208
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=99.89 E-value=2.5e-23 Score=178.98 Aligned_cols=218 Identities=16% Similarity=0.094 Sum_probs=156.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|++|||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRN--VGHDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH--TTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 358999999999999999999999999999999987655444322211 12578999999999998888775
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++.++.+++.. .+ ..++|++||...+.
T Consensus 103 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~-------------- 167 (271)
T 4ibo_A 103 DVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSEL-------------- 167 (271)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--------------
T ss_pred CCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCC--------------
Confidence 799999999965421 2233456799999999999777643 34 46999999976553
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCC-ChhHHHhhhhcccCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSM-PPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+..+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++...... ......... ... ..
T Consensus 168 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~--p~--- 232 (271)
T 4ibo_A 168 --------ARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVK--ART--PA--- 232 (271)
T ss_dssp --------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHH--HHS--TT---
T ss_pred --------CCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHH--hcC--CC---
Confidence 1124568999999999999999887 4899999999999876421100 000000000 011 11
Q ss_pred CCCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
.++...+|+|+++++++.... .+..+++.+
T Consensus 233 --~r~~~pedva~~v~~L~s~~~~~itG~~i~vdG 265 (271)
T 4ibo_A 233 --KRWGKPQELVGTAVFLSASASDYVNGQIIYVDG 265 (271)
T ss_dssp --CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred --CCCcCHHHHHHHHHHHhCccccCCCCcEEEECC
Confidence 458899999999999987543 244567754
No 209
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=99.89 E-value=2.5e-22 Score=173.66 Aligned_cols=218 Identities=14% Similarity=0.099 Sum_probs=145.6
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCC-CcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDP-DNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
+|++|||||+|+||++++++|+++|++|++++|+. +.......... ....++.++.+|++|++++.++++
T Consensus 29 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 29 RPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELS--GLGARVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHH--HTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHH--hcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999999999999743 33332222111 112578999999999999888775
Q ss_pred CccEEEEecccCC--C-----CCCCccchhhhhhhHHHHHHHHHHHhC----C--CccEEEEecCceeeeccCCCCCCcC
Q 040253 77 GCTGVFHLATPMD--F-----ESKDPENEVIRPTINGMVSIMRACKNA----K--TVRRLVFTSSAGTLDVEEHRKPVYD 143 (338)
Q Consensus 77 ~~d~vi~~a~~~~--~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~--~~~~~v~~Ss~~v~~~~~~~~~~~~ 143 (338)
++|++||+||... . ...+..+..+++|+.++.++++++... + ...++|++||...+.
T Consensus 107 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~---------- 176 (280)
T 4da9_A 107 RIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVM---------- 176 (280)
T ss_dssp CCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC--------------
T ss_pred CCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhcc----------
Confidence 7999999998632 1 122334577889999999988876443 1 135899999987663
Q ss_pred CCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCC
Q 040253 144 ETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHY 220 (338)
Q Consensus 144 e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (338)
+..+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++........ .. ........+
T Consensus 177 ------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~---~~~~~~~~p- 239 (280)
T 4da9_A 177 ------------TSPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGK-YD---GLIESGLVP- 239 (280)
T ss_dssp ---------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-------------------------
T ss_pred ------------CCCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchh-HH---HHHhhcCCC-
Confidence 1123458999999999999999988 489999999999987753321110 00 000000111
Q ss_pred CCCCCCccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 221 PIIKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 221 ~~~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
..++...+|+|+++++++..... +..+++.+
T Consensus 240 ----~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 273 (280)
T 4da9_A 240 ----MRRWGEPEDIGNIVAGLAGGQFGFATGSVIQADG 273 (280)
T ss_dssp ------CCBCHHHHHHHHHHHHTSTTGGGTTCEEEEST
T ss_pred ----cCCcCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 14688999999999999976542 44566644
No 210
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=99.89 E-value=3e-22 Score=172.15 Aligned_cols=207 Identities=15% Similarity=0.170 Sum_probs=154.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCC---CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERG---YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
.+|+||||||+|+||++++++|+++| ++|++++|+.+....+..+... ..++.++.+|++|.+++.++++
T Consensus 20 ~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~ 96 (267)
T 1sny_A 20 HMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN---HSNIHILEIDLRNFDAYDKLVADIEG 96 (267)
T ss_dssp CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH---CTTEEEEECCTTCGGGHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhcc---CCceEEEEecCCChHHHHHHHHHHHH
Confidence 46899999999999999999999999 9999999987765544443321 2478999999999999888776
Q ss_pred -----CccEEEEecccCC-CC-----CCCccchhhhhhhHHHHHHHHHHHhC----------C----CccEEEEecCcee
Q 040253 77 -----GCTGVFHLATPMD-FE-----SKDPENEVIRPTINGMVSIMRACKNA----------K----TVRRLVFTSSAGT 131 (338)
Q Consensus 77 -----~~d~vi~~a~~~~-~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----------~----~~~~~v~~Ss~~v 131 (338)
++|+|||+||... .. ..+..+..+++|+.++.++++++... + ...+||++||...
T Consensus 97 ~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~ 176 (267)
T 1sny_A 97 VTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG 176 (267)
T ss_dssp HHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG
T ss_pred hcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc
Confidence 7999999998654 11 11233467889999999998887543 1 0368999999877
Q ss_pred eeccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHH
Q 040253 132 LDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLIT 208 (338)
Q Consensus 132 ~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~ 208 (338)
+.... +..+...|+.+|.+.+.+++.++.+ +|++++++|||.+..+....
T Consensus 177 ~~~~~-------------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~-------- 229 (267)
T 1sny_A 177 SIQGN-------------------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS-------- 229 (267)
T ss_dssp CSTTC-------------------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT--------
T ss_pred cccCC-------------------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC--------
Confidence 64110 0124568999999999999998887 48999999999987543210
Q ss_pred hhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCC--CCCceE-EecCC
Q 040253 209 ALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN--AKGRYI-CSSHP 257 (338)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~-~~~~~ 257 (338)
..++..+|+|+.++.++.... ..|.|+ +.+..
T Consensus 230 -----------------~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~ 264 (267)
T 1sny_A 230 -----------------SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTP 264 (267)
T ss_dssp -----------------TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred -----------------CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcC
Confidence 135788999999999997532 245553 34433
No 211
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.89 E-value=2.1e-22 Score=174.23 Aligned_cols=229 Identities=16% Similarity=0.158 Sum_probs=157.3
Q ss_pred CC-CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCC-CCCcEEEEecccCCCCCchhhhC--
Q 040253 1 MG-SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPK-ASTHLTLWKADLAEEGNFDEPIR-- 76 (338)
Q Consensus 1 m~-~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~-- 76 (338)
|+ ..+|+++||||+|+||++++++|+++|++|++++|+.+............. ...++.++.+|++|.+++.++++
T Consensus 1 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (280)
T 1xkq_A 1 MPRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINST 80 (280)
T ss_dssp -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHH
Confidence 44 346899999999999999999999999999999998765544332221111 01278999999999988877664
Q ss_pred -----CccEEEEecccCCCCC---------CCccchhhhhhhHHHHHHHHHHHhCC--CccEEEEecCceeeeccCCCCC
Q 040253 77 -----GCTGVFHLATPMDFES---------KDPENEVIRPTINGMVSIMRACKNAK--TVRRLVFTSSAGTLDVEEHRKP 140 (338)
Q Consensus 77 -----~~d~vi~~a~~~~~~~---------~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~ 140 (338)
++|+|||+||...... .+..+..+++|+.++.++++++...- ...++|++||...+. ..
T Consensus 81 ~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~~--- 155 (280)
T 1xkq_A 81 LKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGP--QA--- 155 (280)
T ss_dssp HHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSS--SC---
T ss_pred HHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccC--CC---
Confidence 6999999998643211 12245678899999999998876431 016999999987663 10
Q ss_pred CcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCC-Chh----HHHhhhh
Q 040253 141 VYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSM-PPS----LITALSP 212 (338)
Q Consensus 141 ~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~-~~~----~~~~~~~ 212 (338)
..+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++...... ... .......
T Consensus 156 ----------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~ 219 (280)
T 1xkq_A 156 ----------------QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMAS 219 (280)
T ss_dssp ----------------CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH
T ss_pred ----------------CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHH
Confidence 023458999999999999998866 4899999999999987422110 000 0001111
Q ss_pred cccCCCCCCCCCCCccccHHHHHHHHHHhhcCC---CC-CCceEEecC
Q 040253 213 ITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHP---NA-KGRYICSSH 256 (338)
Q Consensus 213 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~---~~-~~~~~~~~~ 256 (338)
. ...... .++.+.+|+|+++++++... .. +..+++.+.
T Consensus 220 ~-~~~~p~-----~~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG 261 (280)
T 1xkq_A 220 H-KECIPI-----GAAGKPEHIANIILFLADRNLSFYILGQSIVADGG 261 (280)
T ss_dssp C-TTTCTT-----SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTT
T ss_pred H-HcCCCC-----CCCCCHHHHHHHHHHhcCcccccCccCCeEEECCC
Confidence 1 111111 46899999999999998653 22 445666443
No 212
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=99.89 E-value=9.7e-23 Score=174.84 Aligned_cols=210 Identities=17% Similarity=0.125 Sum_probs=150.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+..... ....+.+|++|.+++.++++
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~-------------~~~~~~~Dv~~~~~~~~~~~~~~~~~g 93 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA-------------ADLHLPGDLREAAYADGLPGAVAAGLG 93 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC-------------CSEECCCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-------------hhhccCcCCCCHHHHHHHHHHHHHhcC
Confidence 3689999999999999999999999999999999765431 22455889999887766553
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++.++++++ ++.+ ..++|++||...+.
T Consensus 94 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~-------------- 158 (266)
T 3uxy_A 94 RLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLR-------------- 158 (266)
T ss_dssp CCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTB--------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCC--------------
Confidence 799999999965421 22334567889999999999887 4444 57999999987653
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCC---ChhHHHhhhhcccCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSM---PPSLITALSPITRNEAHYP 221 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~~ 221 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+.++...... ........... ......
T Consensus 159 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~p~- 228 (266)
T 3uxy_A 159 --------PGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAEL-GRTVPL- 228 (266)
T ss_dssp --------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHH-HTTSTT-
T ss_pred --------CCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHH-HhcCCC-
Confidence 11245689999999999999998876 899999999999876421100 00000000000 111111
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
.++.+.+|+|+++++++..... +..+++.+
T Consensus 229 ----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 261 (266)
T 3uxy_A 229 ----GRIAEPEDIADVVLFLASDAARYLCGSLVEVNG 261 (266)
T ss_dssp ----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ----CCCcCHHHHHHHHHHHhCchhcCCcCCEEEECc
Confidence 4688999999999999976432 44567744
No 213
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=99.89 E-value=1e-22 Score=174.98 Aligned_cols=212 Identities=14% Similarity=0.148 Sum_probs=152.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+..... ..+..+.+|++|.+++.++++
T Consensus 13 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 80 (269)
T 3vtz_A 13 TDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV------------NVSDHFKIDVTNEEEVKEAVEKTTKKYG 80 (269)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT------------TSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc------------CceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999765431 356788999999998887764
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++.++++++.. .+ ..++|++||...+.
T Consensus 81 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-------------- 145 (269)
T 3vtz_A 81 RIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYA-------------- 145 (269)
T ss_dssp CCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--------------
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhcc--------------
Confidence 799999999965421 1122346788999999998887643 34 57999999988774
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc--CccEEEEcCCceeCCCCCCC-------CChhHHHhhhhcccCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN--NIDFISIIPSLVVGPFLTSS-------MPPSLITALSPITRNEA 218 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~ 218 (338)
+..+...|+.+|.+.+.+.+.++.++ ++++++++||.+.++..... ............ ....
T Consensus 146 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 216 (269)
T 3vtz_A 146 --------ATKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEW-GRQH 216 (269)
T ss_dssp --------BCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHH-HHHS
T ss_pred --------CCCCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHH-HhcC
Confidence 11245689999999999999999887 89999999999987642100 000000000000 0011
Q ss_pred CCCCCCCCccccHHHHHHHHHHhhcCCC---CCCceEEecC
Q 040253 219 HYPIIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSSH 256 (338)
Q Consensus 219 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~~ 256 (338)
.. .++.+.+|+|+++++++.... .+..+++.+.
T Consensus 217 p~-----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 252 (269)
T 3vtz_A 217 PM-----GRIGRPEEVAEVVAFLASDRSSFITGACLTVDGG 252 (269)
T ss_dssp TT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CC-----CCCcCHHHHHHHHHHHhCCccCCCcCcEEEECCC
Confidence 11 468899999999999987543 2445677543
No 214
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=99.89 E-value=1.7e-22 Score=171.97 Aligned_cols=209 Identities=15% Similarity=0.109 Sum_probs=144.9
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
..+|+++||||+|+||.+++++|+++|++|++++|+.+............ ..++.++.+|++|.+++.++++
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA--GGRIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 34689999999999999999999999999999999887665554332211 2578999999999998888775
Q ss_pred CccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||.... ...+..+..+++|+.++..+.+++. +.+ ..++|++||...+.
T Consensus 83 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~-------------- 147 (252)
T 3h7a_A 83 PLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLR-------------- 147 (252)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTC--------------
T ss_pred CceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcC--------------
Confidence 68999999996542 1122345678999999998888763 334 47999999976653
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccE-EEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDF-ISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~-~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+......|+.+|.+.+.+.+.++.++ |+++ +++.||.+..+.......... . .+...
T Consensus 148 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~----~-------~~~~~ 208 (252)
T 3h7a_A 148 --------GGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMF----G-------KDALA 208 (252)
T ss_dssp --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------
T ss_pred --------CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhh----h-------hhhhc
Confidence 11234589999999999999998875 8999 899999887654322111000 0 00000
Q ss_pred CCCccccHHHHHHHHHHhhcCCCC
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPNA 247 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~~ 247 (338)
....+...+|+|+++++++..+..
T Consensus 209 ~~~~~~~pedvA~~~~~l~s~~~~ 232 (252)
T 3h7a_A 209 NPDLLMPPAAVAGAYWQLYQQPKS 232 (252)
T ss_dssp -----CCHHHHHHHHHHHHHCCGG
T ss_pred CCccCCCHHHHHHHHHHHHhCchh
Confidence 012389999999999999987543
No 215
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=99.89 E-value=3.5e-22 Score=170.83 Aligned_cols=220 Identities=14% Similarity=0.154 Sum_probs=153.9
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc--HHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN--KKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
+|+++||||+|+||++++++|+++|++|++++|+.+. .......... ...++.++.+|++|.+++.++++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEA--ADQKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHT--TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999998765 3333222211 12578999999999988877765
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCc-cEEEEecCceeeeccCCCCCCcCCC
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTV-RRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~-~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
++|++||+||..... ..+..+..+++|+.++.++++++... + . .++|++||...+.
T Consensus 80 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~------------ 146 (258)
T 3a28_C 80 GGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQ------------ 146 (258)
T ss_dssp TCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTS------------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhcc------------
Confidence 799999999865421 12234567899999999998877542 4 4 7999999987653
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCC-------hhHHHhhhhccc
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMP-------PSLITALSPITR 215 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~-------~~~~~~~~~~~~ 215 (338)
+..+...|+.+|...+.+.+.++.++ |+++++++||.+..+....... .......... .
T Consensus 147 ----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~ 215 (258)
T 3a28_C 147 ----------GFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEY-S 215 (258)
T ss_dssp ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHH-H
T ss_pred ----------CCCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHH-H
Confidence 11234589999999999999988774 8999999999997653110000 0000000000 0
Q ss_pred CCCCCCCCCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 216 NEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 216 ~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
..... .++.+.+|+|+++++++.... ..| .+++.+
T Consensus 216 ~~~p~-----~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG 253 (258)
T 3a28_C 216 SSIAL-----GRPSVPEDVAGLVSFLASENSNYVTGQVMLVDG 253 (258)
T ss_dssp TTCTT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred hcCCC-----CCccCHHHHHHHHHHHhCcccCCCCCCEEEECC
Confidence 00111 358899999999999997542 233 556644
No 216
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=99.89 E-value=2.4e-22 Score=172.53 Aligned_cols=221 Identities=17% Similarity=0.174 Sum_probs=151.3
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCC-cHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPD-NKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
..+|++|||||+|+||.+++++|+++|++|++.+++.. ....+...... ...++.++.+|++|.+++.++++
T Consensus 25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEA--AGGKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh--cCCeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 34688999999999999999999999999998866443 33333222211 12578999999999998887764
Q ss_pred --CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 77 --GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 77 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
++|++||+||..... ..+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~--------------- 167 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGL--------------- 167 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHH---------------
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhcc---------------
Confidence 799999999865421 112234677899999999998876542 135899999987653
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQ 225 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (338)
+.+....|+.+|.+.+.+.+.++.++ |++++++.||.+..+.............. ....+.
T Consensus 168 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~----~~~~p~----- 231 (267)
T 3u5t_A 168 -------LHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRF----AKLAPL----- 231 (267)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHH----HTSSTT-----
T ss_pred -------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHH----HhcCCC-----
Confidence 11234589999999999999999886 89999999999987643221111111111 111111
Q ss_pred CccccHHHHHHHHHHhhcCCCC--CC-ceEEecC
Q 040253 226 GQFVHLDDLCSAHIFLFEHPNA--KG-RYICSSH 256 (338)
Q Consensus 226 ~~~i~v~D~a~~~~~~l~~~~~--~~-~~~~~~~ 256 (338)
.++...+|+|+++++++..... .| .+++.+.
T Consensus 232 ~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 232 ERLGTPQDIAGAVAFLAGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp CSCBCHHHHHHHHHHHHSTTTTTCCSEEEEESSS
T ss_pred CCCcCHHHHHHHHHHHhCccccCccCCEEEeCCC
Confidence 4688999999999999975432 44 4566443
No 217
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=99.89 E-value=2.4e-22 Score=173.47 Aligned_cols=222 Identities=14% Similarity=0.112 Sum_probs=155.8
Q ss_pred CC-CCCcEEEEeCCc--hhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-
Q 040253 1 MG-SIAETVCVTGAS--GFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR- 76 (338)
Q Consensus 1 m~-~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~- 76 (338)
|+ ..+|+|+||||+ |+||++++++|+++|++|++++|+.+.....+.+.... +++.++.+|++|.+++.++++
T Consensus 1 M~~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~---~~~~~~~~D~~~~~~v~~~~~~ 77 (275)
T 2pd4_A 1 MGFLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQEL---NSPYVYELDVSKEEHFKSLYNS 77 (275)
T ss_dssp -CTTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---CCcEEEEcCCCCHHHHHHHHHH
Confidence 55 346899999999 99999999999999999999999876333333332211 247889999999988877664
Q ss_pred ------CccEEEEecccCCC---------CCCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCC
Q 040253 77 ------GCTGVFHLATPMDF---------ESKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKP 140 (338)
Q Consensus 77 ------~~d~vi~~a~~~~~---------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~ 140 (338)
++|++||+||.... ...+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 78 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~------- 150 (275)
T 2pd4_A 78 VKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTK------- 150 (275)
T ss_dssp HHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTS-------
T ss_pred HHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcC-------
Confidence 68999999986432 1122345688999999999999987652 125899999976542
Q ss_pred CcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCC
Q 040253 141 VYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNE 217 (338)
Q Consensus 141 ~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~ 217 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+.++....... ...........
T Consensus 151 ---------------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~--~~~~~~~~~~~- 212 (275)
T 2pd4_A 151 ---------------YMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIAD--FRMILKWNEIN- 212 (275)
T ss_dssp ---------------BCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTT--HHHHHHHHHHH-
T ss_pred ---------------CCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccc--cHHHHHHHHhc-
Confidence 11234589999999999999988876 8999999999998875322110 00000100011
Q ss_pred CCCCCCCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 218 AHYPIIKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 218 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
... ..+.+.+|+|++++.++.... ..| .+++.+
T Consensus 213 ~p~-----~~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdg 248 (275)
T 2pd4_A 213 APL-----RKNVSLEEVGNAGMYLLSSLSSGVSGEVHFVDA 248 (275)
T ss_dssp STT-----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCc-----CCCCCHHHHHHHHHHHhCccccCCCCCEEEECC
Confidence 011 347789999999999986432 234 455644
No 218
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=99.89 E-value=3.5e-22 Score=170.06 Aligned_cols=206 Identities=18% Similarity=0.207 Sum_probs=148.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
++|+|+||||+|+||++++++|+++|++|++++|+.+.. ..+.++.+|++|++++.++++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-------------~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 86 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP-------------EGFLAVKCDITDTEQVEQAYKEIEETHG 86 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC-------------TTSEEEECCTTSHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh-------------ccceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 368999999999999999999999999999999976542 236889999999988877664
Q ss_pred CccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||.... ...+..+..+++|+.++.++++++.. .+ ..++|++||...+. .
T Consensus 87 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~--~----------- 152 (253)
T 2nm0_A 87 PVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLL--G----------- 152 (253)
T ss_dssp SCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCC--C-----------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCC--C-----------
Confidence 57999999986432 12344567889999999998886643 34 57999999976653 0
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
..+...|+.+|.+.+.+.+.++.++ |+++++++||.+..+.... ......... ......
T Consensus 153 ---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-~~~~~~~~~----~~~~p~---- 214 (253)
T 2nm0_A 153 ---------SAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV-LTDEQRANI----VSQVPL---- 214 (253)
T ss_dssp ---------HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC----------CHHHH----HTTCTT----
T ss_pred ---------CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-cCHHHHHHH----HhcCCC----
Confidence 0123589999999999999988874 7999999999987664221 110000000 011111
Q ss_pred CCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
.++++.+|+|++++.++..+. ..| .+.+.+
T Consensus 215 -~~~~~p~dvA~~i~~l~s~~~~~~tG~~i~vdG 247 (253)
T 2nm0_A 215 -GRYARPEEIAATVRFLASDDASYITGAVIPVDG 247 (253)
T ss_dssp -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -CCCcCHHHHHHHHHHHhCccccCCcCcEEEECC
Confidence 358899999999999997543 234 455543
No 219
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=99.89 E-value=1.7e-22 Score=172.62 Aligned_cols=221 Identities=17% Similarity=0.181 Sum_probs=152.4
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|+++||||+|+||++++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQ--AGGHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--cCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 57999999999999999999999999999999986554443222111 11468899999999998887775 7
Q ss_pred ccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 78 CTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 78 ~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
+|++||+||..... ..+..+..+++|+.++.++++++... +...++|++||...+. .
T Consensus 80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~------------ 145 (256)
T 1geg_A 80 FDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHV--G------------ 145 (256)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS--C------------
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcC--C------------
Confidence 99999999864321 11233467899999998888776542 2136899999976553 1
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCCh--h-----HHHhhhhcccCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPP--S-----LITALSPITRNEA 218 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~--~-----~~~~~~~~~~~~~ 218 (338)
.++...|+.+|...+.+.+.++.++ |+++++++||.+.++........ . ........ ....
T Consensus 146 --------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 216 (256)
T 1geg_A 146 --------NPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEF-AKRI 216 (256)
T ss_dssp --------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHH-HTTC
T ss_pred --------CCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHH-HhcC
Confidence 1134589999999999999988764 89999999999987642100000 0 00000000 0111
Q ss_pred CCCCCCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 219 HYPIIKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 219 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
.. .++.+.+|+|+++++++.... ..| .+.+.+
T Consensus 217 p~-----~r~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdG 251 (256)
T 1geg_A 217 TL-----GRLSEPEDVAACVSYLASPDSDYMTGQSLLIDG 251 (256)
T ss_dssp TT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred CC-----CCCcCHHHHHHHHHHHhCccccCCCCCEEEeCC
Confidence 11 358999999999999987542 234 556644
No 220
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=99.89 E-value=2.4e-22 Score=169.27 Aligned_cols=197 Identities=19% Similarity=0.165 Sum_probs=147.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|++|||||+|+||++++++|+++|++|++++|+.+.......... .++.++.+|++|.+++.++++ +
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 77 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG-----NAVIGIVADLAHHEDVDVAFAAAVEWGGL 77 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGEEEEECCTTSHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 6899999999999999999999999999999998766555443331 368999999999988877664 6
Q ss_pred ccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHHhC--CCccEEEEecCceeeeccCCCCCCcCCCCCCch
Q 040253 78 CTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACKNA--KTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDL 150 (338)
Q Consensus 78 ~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~ 150 (338)
+|++||+||.... ...+..+..+++|+.++..+++++... ....++|++||...+. .
T Consensus 78 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~--~-------------- 141 (235)
T 3l6e_A 78 PELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQV--G-------------- 141 (235)
T ss_dssp CSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCS--S--------------
T ss_pred CcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcC--C--------------
Confidence 8999999996432 122334568899999999988877432 1123999999977663 1
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCc
Q 040253 151 DFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQ 227 (338)
Q Consensus 151 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (338)
......|+.+|.+.+.+.+.++.++ |+++++++||.+..+..... . .. ....
T Consensus 142 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-----~-------~~-------~~~~ 196 (235)
T 3l6e_A 142 ------KANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNT-----D-------HV-------DPSG 196 (235)
T ss_dssp ------CSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC------------------------------
T ss_pred ------CCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhcc-----C-------CC-------CCcC
Confidence 1134589999999999999999875 79999999998865532110 0 00 0125
Q ss_pred cccHHHHHHHHHHhhcCCCC
Q 040253 228 FVHLDDLCSAHIFLFEHPNA 247 (338)
Q Consensus 228 ~i~v~D~a~~~~~~l~~~~~ 247 (338)
+...+|+|++++.++.++..
T Consensus 197 ~~~pedvA~~v~~l~~~~~~ 216 (235)
T 3l6e_A 197 FMTPEDAAAYMLDALEARSS 216 (235)
T ss_dssp CBCHHHHHHHHHHHTCCCSS
T ss_pred CCCHHHHHHHHHHHHhCCCC
Confidence 88999999999999986543
No 221
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=99.89 E-value=9.5e-23 Score=179.89 Aligned_cols=231 Identities=16% Similarity=0.094 Sum_probs=164.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcC----------CCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRD----------PDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP 74 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~----------~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 74 (338)
+|++|||||+|+||.+++++|+++|++|++++|+ .+.......... ....++.++.+|++|.+++.++
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~d~~~v~~~ 104 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEIT--AAGGEAVADGSNVADWDQAAGL 104 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHH--HTTCEEEEECCCTTSHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHH--hcCCcEEEEECCCCCHHHHHHH
Confidence 5789999999999999999999999999999987 333333322211 1125789999999999988877
Q ss_pred hC-------CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhCC---------CccEEEEecCceeee
Q 040253 75 IR-------GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNAK---------TVRRLVFTSSAGTLD 133 (338)
Q Consensus 75 ~~-------~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~---------~~~~~v~~Ss~~v~~ 133 (338)
++ ++|++||+||..... ..+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 105 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~ 184 (322)
T 3qlj_A 105 IQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQ 184 (322)
T ss_dssp HHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHcc
Confidence 65 799999999965421 223345688999999999988774331 015899999987663
Q ss_pred ccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhh
Q 040253 134 VEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITAL 210 (338)
Q Consensus 134 ~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~ 210 (338)
+..+...|+.+|.+.+.+.+.++.+ +|+++++++|| +..+..........
T Consensus 185 ----------------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~---- 237 (322)
T 3qlj_A 185 ----------------------GSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM---- 237 (322)
T ss_dssp ----------------------CBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC------
T ss_pred ----------------------CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh----
Confidence 1124558999999999999999988 48999999998 54443221111100
Q ss_pred hhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCC---CCCceEEecC------------------CCCHHHHHHHHHH
Q 040253 211 SPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSSH------------------PATILELAKFLRE 269 (338)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~~------------------~~t~~e~~~~i~~ 269 (338)
.. .....+++..+|+|+++++++.... .+..+++.+. ..++.|+++.+.+
T Consensus 238 ----~~-----~~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~ 308 (322)
T 3qlj_A 238 ----AT-----QDQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVAD 308 (322)
T ss_dssp ---------------CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHH
T ss_pred ----hc-----cccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHH
Confidence 00 0111457789999999999986543 2445566432 3478999999998
Q ss_pred hCCC
Q 040253 270 KYPE 273 (338)
Q Consensus 270 ~~~~ 273 (338)
.++.
T Consensus 309 ~~~~ 312 (322)
T 3qlj_A 309 LLGK 312 (322)
T ss_dssp HHHH
T ss_pred Hhhc
Confidence 8764
No 222
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=99.89 E-value=2.2e-22 Score=172.49 Aligned_cols=201 Identities=19% Similarity=0.129 Sum_probs=146.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+++||||||+|+||.+++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 28 SGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVA--AGGEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHH--hCCceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 368999999999999999999999999999999987665544332211 12578999999999998877664
Q ss_pred CccEEEEecccCC------CCCCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 GCTGVFHLATPMD------FESKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 ~~d~vi~~a~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|+|||+||... ....+..+..+++|+.++.++++++.. .+ ..+||++||...+.
T Consensus 106 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------------- 171 (262)
T 3rkr_A 106 RCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKN------------- 171 (262)
T ss_dssp CCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSC-------------
T ss_pred CCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcC-------------
Confidence 5899999998622 112223456889999999999887643 44 57999999987663
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+..+...|+.+|.+.+.+++.++.+ .|+++++++||.+..+..... . .. .
T Consensus 172 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~-------~~-~----- 224 (262)
T 3rkr_A 172 ---------PVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGL-----S-------AK-K----- 224 (262)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------
T ss_pred ---------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCccccc-----c-------cc-c-----
Confidence 1124568999999999999998877 489999999998876532110 0 00 0
Q ss_pred CCCccccHHHHHHHHHHhhcCCCC
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPNA 247 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~~ 247 (338)
....++..+|+|++++.++.....
T Consensus 225 ~~~~~~~p~dvA~~v~~l~s~~~~ 248 (262)
T 3rkr_A 225 SALGAIEPDDIADVVALLATQADQ 248 (262)
T ss_dssp ----CCCHHHHHHHHHHHHTCCTT
T ss_pred ccccCCCHHHHHHHHHHHhcCccc
Confidence 114578999999999999987543
No 223
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=99.89 E-value=2.9e-22 Score=174.68 Aligned_cols=219 Identities=15% Similarity=0.038 Sum_probs=158.4
Q ss_pred CCcEEEEeCCch--hhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 4 IAETVCVTGASG--FIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 4 ~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
.+|++|||||+| +||.+++++|+++|++|++++|+.+..+....+.... .++.++.+|++|.+++.++++
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL---GVKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH---TCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---CCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 358999999998 9999999999999999999999876555444433211 346889999999998887764
Q ss_pred --CccEEEEecccCC---------CCCCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCC
Q 040253 77 --GCTGVFHLATPMD---------FESKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDE 144 (338)
Q Consensus 77 --~~d~vi~~a~~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e 144 (338)
++|++||+||... ....+.....+++|+.++.++++++...- ...++|++||...+.
T Consensus 106 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~----------- 174 (296)
T 3k31_A 106 WGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEK----------- 174 (296)
T ss_dssp HSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTS-----------
T ss_pred cCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhcc-----------
Confidence 6899999998643 12223345788999999999999987653 135999999987653
Q ss_pred CCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCC
Q 040253 145 TSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYP 221 (338)
Q Consensus 145 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (338)
+......|+.+|.+.+.+.+.++.++ |+++++++||.+..+..... . ............ ...
T Consensus 175 -----------~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~-~-~~~~~~~~~~~~-~p~- 239 (296)
T 3k31_A 175 -----------VVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGI-S-DFHYILTWNKYN-SPL- 239 (296)
T ss_dssp -----------CCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSC-H-HHHHHHHHHHHH-STT-
T ss_pred -----------CCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcc-c-chHHHHHHHHhc-CCC-
Confidence 11234589999999999999998875 89999999999988754321 1 111111100011 111
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
.++...+|+|+++++++.... . +..+++.+
T Consensus 240 ----~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG 272 (296)
T 3k31_A 240 ----RRNTTLDDVGGAALYLLSDLGRGTTGETVHVDC 272 (296)
T ss_dssp ----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ----CCCCCHHHHHHHHHHHcCCccCCccCCEEEECC
Confidence 457889999999999997532 2 34566644
No 224
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=99.89 E-value=8.8e-23 Score=175.20 Aligned_cols=222 Identities=16% Similarity=0.082 Sum_probs=155.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|++|||||+|.||.+++++|+++|++|++++|+.+................++.++.+|++|.+++.++++
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG 86 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999876554443322111111358999999999988877664
Q ss_pred CccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||.... ...+..+..+++|+.++.++.+++.. .+ ..++|++||...+.
T Consensus 87 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~-------------- 151 (265)
T 3lf2_A 87 CASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQ-------------- 151 (265)
T ss_dssp SCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTS--------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCC--------------
Confidence 68999999986432 11223456789999999999888743 33 57899999976653
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCC--------C-hhHHHhhhhccc
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSM--------P-PSLITALSPITR 215 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~--------~-~~~~~~~~~~~~ 215 (338)
+......|+.+|.+.+.+.+.++.++ |+++++++||.+.++...... . ........ ..
T Consensus 152 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 221 (265)
T 3lf2_A 152 --------PEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLA--RN 221 (265)
T ss_dssp --------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHH--HH
T ss_pred --------CCCCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHh--hc
Confidence 11235689999999999999998876 899999999999875311000 0 00000000 01
Q ss_pred CCCCCCCCCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 216 NEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 216 ~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
...+. .++...+|+|+++++++.... ..| .+++.+
T Consensus 222 ~~~p~-----~r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG 259 (265)
T 3lf2_A 222 KQIPL-----GRLGKPIEAARAILFLASPLSAYTTGSHIDVSG 259 (265)
T ss_dssp TTCTT-----CSCBCHHHHHHHHHHHHSGGGTTCCSEEEEESS
T ss_pred cCCCc-----CCCcCHHHHHHHHHHHhCchhcCcCCCEEEECC
Confidence 11111 468899999999999987433 234 456644
No 225
>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}
Probab=99.89 E-value=1.5e-22 Score=171.75 Aligned_cols=213 Identities=17% Similarity=0.180 Sum_probs=152.8
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHH-CCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLE-RGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
..+|++|||||+|+||++++++|++ .|++|++.+|+.+... ..+.++.+|++|.+++.++++
T Consensus 2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~~~~ 69 (244)
T 4e4y_A 2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSA------------ENLKFIKADLTKQQDITNVLDIIKNV 69 (244)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCC------------TTEEEEECCTTCHHHHHHHHHHTTTC
T ss_pred CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccccc------------ccceEEecCcCCHHHHHHHHHHHHhC
Confidence 3578999999999999999999998 7899999988765211 467999999999998888775
Q ss_pred CccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCCCch
Q 040253 77 GCTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDL 150 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~ 150 (338)
++|++||+||.... ...+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 70 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~----------------- 132 (244)
T 4e4y_A 70 SFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFI----------------- 132 (244)
T ss_dssp CEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTC-----------------
T ss_pred CCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHcc-----------------
Confidence 78999999996432 1122345678999999999999987653 124899999987663
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhH-------HHhhhhcccCCCCC
Q 040253 151 DFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSL-------ITALSPITRNEAHY 220 (338)
Q Consensus 151 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~-------~~~~~~~~~~~~~~ 220 (338)
+..+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++.......... ....... ......
T Consensus 133 -----~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~p~ 206 (244)
T 4e4y_A 133 -----AKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQE-EKEFPL 206 (244)
T ss_dssp -----CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHH-HTTSTT
T ss_pred -----CCCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHH-hhcCCC
Confidence 1123458999999999999999885 48999999999998764211000000 0000000 111111
Q ss_pred CCCCCCccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 221 PIIKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 221 ~~~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
.++.+.+|+|+++++++..... +..+++.+
T Consensus 207 -----~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdG 239 (244)
T 4e4y_A 207 -----NRIAQPQEIAELVIFLLSDKSKFMTGGLIPIDG 239 (244)
T ss_dssp -----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -----CCCcCHHHHHHHHHHHhcCccccccCCeEeECC
Confidence 4688999999999999975432 34566644
No 226
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=99.89 E-value=3.2e-22 Score=172.09 Aligned_cols=217 Identities=16% Similarity=0.165 Sum_probs=153.3
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCC-cHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPD-NKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
+|+++||||+|+||.+++++|+++|++|++++|+.. .......... ....++.++.+|++|.+++.++++
T Consensus 25 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 25 KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHER--DAGRDFKAYAVDVADFESCERCAEKVLADFG 102 (269)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHH--TTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHH--hcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999999985443 2222221111 112578999999999998877664
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++.++++++.. .+ ..++|++||...+.
T Consensus 103 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-------------- 167 (269)
T 3gk3_A 103 KVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSR-------------- 167 (269)
T ss_dssp CCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--------------
T ss_pred CCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhcc--------------
Confidence 799999999865421 1223456789999999998887643 34 57999999987663
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+..+...|+.+|.+.+.+++.++.++ |+++++++||.+..+.......... . ........
T Consensus 168 --------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~----~-----~~~~~~~~ 230 (269)
T 3gk3_A 168 --------GAFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVL----E-----AKILPQIP 230 (269)
T ss_dssp --------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC----------------CCSGGGCT
T ss_pred --------CCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHH----H-----HHhhhcCC
Confidence 11245689999999999999988875 8999999999998765332111000 0 00000111
Q ss_pred CCccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
..++.+.+|+|+++++++..... +..+++++
T Consensus 231 ~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdg 264 (269)
T 3gk3_A 231 VGRLGRPDEVAALIAFLCSDDAGFVTGADLAING 264 (269)
T ss_dssp TSSCBCHHHHHHHHHHHTSTTCTTCCSCEEEEST
T ss_pred cCCccCHHHHHHHHHHHhCCCcCCeeCcEEEECC
Confidence 14588999999999999976432 44667754
No 227
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=99.89 E-value=8.2e-23 Score=174.20 Aligned_cols=219 Identities=13% Similarity=0.121 Sum_probs=152.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+||||||+|+||++++++|+++|++|++++|+.+......... ..++.++.+|++|++++.++++
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL-----GERSMFVRHDVSSEADWTLVMAAVQRRLG 79 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-----CTTEEEECCCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----CCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3689999999999999999999999999999999865544433222 1468999999999988877664
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|+|||+||..... ..+..+..+++|+.++..+.+++ ++.+ .++|++||...+.
T Consensus 80 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~-------------- 143 (253)
T 1hxh_A 80 TLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWL-------------- 143 (253)
T ss_dssp SCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTS--------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcC--------------
Confidence 579999999864321 11234567889988887766654 3333 7999999987763
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc-----CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN-----NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPI 222 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (338)
+..+...|+.+|...+.+.+.++.+. |++++++|||.++++.............. ........
T Consensus 144 --------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~--~~~~~~~~-- 211 (253)
T 1hxh_A 144 --------PIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEM--VLHDPKLN-- 211 (253)
T ss_dssp --------CCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHH--HBCBTTTB--
T ss_pred --------CCCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHH--HhhhhccC--
Confidence 11244589999999999999988773 89999999999998742110000000000 00100000
Q ss_pred CCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEecC
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSSH 256 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~~ 256 (338)
...++.+.+|+|++++.++..+. ..| .+++.+.
T Consensus 212 -p~~~~~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG 247 (253)
T 1hxh_A 212 -RAGRAYMPERIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp -TTCCEECHHHHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred -ccCCCCCHHHHHHHHHHHcCccccCCCCcEEEECCC
Confidence 01458899999999999997543 234 5566543
No 228
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=99.89 E-value=4.2e-22 Score=169.33 Aligned_cols=208 Identities=15% Similarity=0.105 Sum_probs=145.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC---CccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---GCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~ 80 (338)
.+|+|+||||+|+||++++++|+++|++|++++|+.+. .+.+ ..+.++ +|+ .+++.++++ ++|+
T Consensus 18 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~~~-------~~~~~~-~D~--~~~~~~~~~~~~~iD~ 84 (249)
T 1o5i_A 18 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---LKRS-------GHRYVV-CDL--RKDLDLLFEKVKEVDI 84 (249)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HHHT-------CSEEEE-CCT--TTCHHHHHHHSCCCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HHhh-------CCeEEE-eeH--HHHHHHHHHHhcCCCE
Confidence 46899999999999999999999999999999997622 2221 246677 999 445555543 8999
Q ss_pred EEEecccCCCC-----CCCccchhhhhhhHHHHHHHHH----HHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchh
Q 040253 81 VFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRA----CKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLD 151 (338)
Q Consensus 81 vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~----~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~ 151 (338)
|||+||..... ..+..+..+++|+.++.++.++ +++.+ ..++|++||...+. .
T Consensus 85 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~--------------- 146 (249)
T 1o5i_A 85 LVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVIS--P--------------- 146 (249)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--C---------------
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcC--C---------------
Confidence 99999864321 1223356788999987766544 44555 68999999988774 1
Q ss_pred hhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCcc
Q 040253 152 FVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQF 228 (338)
Q Consensus 152 ~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (338)
..+...|+.+|.+.+.+.+.++.+ +|+++++++||.+.++.............. ...... .++
T Consensus 147 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~----~~~~p~-----~~~ 212 (249)
T 1o5i_A 147 -----IENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQV----ESQIPM-----RRM 212 (249)
T ss_dssp -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHH----HTTSTT-----SSC
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHH----HhcCCC-----CCC
Confidence 123458999999999999998877 489999999999998753210011000000 011111 468
Q ss_pred ccHHHHHHHHHHhhcCCC--C-CCceEEecC
Q 040253 229 VHLDDLCSAHIFLFEHPN--A-KGRYICSSH 256 (338)
Q Consensus 229 i~v~D~a~~~~~~l~~~~--~-~~~~~~~~~ 256 (338)
.+.+|+|++++.++.... . +..+++.+.
T Consensus 213 ~~~~dvA~~i~~l~s~~~~~~tG~~~~vdgG 243 (249)
T 1o5i_A 213 AKPEEIASVVAFLCSEKASYLTGQTIVVDGG 243 (249)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred cCHHHHHHHHHHHcCccccCCCCCEEEECCC
Confidence 899999999999987532 2 345666543
No 229
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=99.89 E-value=2.3e-22 Score=171.80 Aligned_cols=216 Identities=13% Similarity=0.134 Sum_probs=153.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEE-cCCCcHHHHH-HHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATV-RDPDNKKKVK-HLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
..|+||||||+|+||++++++|+++|++|++++ |+........ .+... ..++.++.+|++|.+++.++++
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL---GFDFYASEGNVGDWDSTKQAFDKVKAE 88 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT---TCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---CCeeEEEecCCCCHHHHHHHHHHHHHh
Confidence 468999999999999999999999999999988 5554443332 22221 2578999999999988877764
Q ss_pred --CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCC
Q 040253 77 --GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 77 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
++|++||+||..... ..+..+..+++|+.++.++.+++ ++.+ ..++|++||...+.
T Consensus 89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~------------ 155 (256)
T 3ezl_A 89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQK------------ 155 (256)
T ss_dssp TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGG------------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcc------------
Confidence 789999999865421 12234568899999988887665 3444 57999999977653
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPI 222 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+.++............... .. ..
T Consensus 156 ----------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~---~~--~~-- 218 (256)
T 3ezl_A 156 ----------GQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVA---TI--PV-- 218 (256)
T ss_dssp ----------SCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHH---HS--TT--
T ss_pred ----------CCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHh---cC--CC--
Confidence 11245689999999999999988874 899999999999876432211111111111 11 11
Q ss_pred CCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
.++.+.+|+|+++++++.... . +..+++.+
T Consensus 219 ---~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg 251 (256)
T 3ezl_A 219 ---RRLGSPDEIGSIVAWLASEESGFSTGADFSLNG 251 (256)
T ss_dssp ---SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ---CCCcCHHHHHHHHHHHhCCcccCCcCcEEEECC
Confidence 458899999999999986432 2 34567754
No 230
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=99.89 E-value=2.9e-22 Score=170.13 Aligned_cols=206 Identities=17% Similarity=0.140 Sum_probs=147.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+|+||||+|+||++++++|+++|++|++++|+.+... .+..+.+|++|++++.++++
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-------------~~~~~~~D~~~~~~~~~~~~~~~~~~g 80 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK-------------GLFGVEVDVTDSDAVDRAFTAVEEHQG 80 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT-------------TSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH-------------HhcCeeccCCCHHHHHHHHHHHHHHcC
Confidence 3589999999999999999999999999999999865432 22248899999988877664
Q ss_pred CccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||.... ...+..+..+++|+.++.++++++.. .+ ..++|++||...+. .
T Consensus 81 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~----------- 146 (247)
T 1uzm_A 81 PVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLW--G----------- 146 (247)
T ss_dssp SCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC----------------
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhcc--C-----------
Confidence 68999999986442 11233457889999999999887743 44 57999999986653 1
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
..+...|+.+|...+.+.+.++.+. |+++++++||.+.++.... ........ .... ...
T Consensus 147 ---------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~---~~~~-~p~---- 208 (247)
T 1uzm_A 147 ---------IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRA-LDERIQQG---ALQF-IPA---- 208 (247)
T ss_dssp -----------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHH-SCHHHHHH---HGGG-CTT----
T ss_pred ---------CCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhh-cCHHHHHH---HHhc-CCC----
Confidence 1134589999999999999988774 8999999999997653111 11111100 0011 111
Q ss_pred CCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
.++.+.+|+|+++++++.... .+..+++.+
T Consensus 209 -~~~~~~~dvA~~~~~l~s~~~~~~~G~~i~vdg 241 (247)
T 1uzm_A 209 -KRVGTPAEVAGVVSFLASEDASYISGAVIPVDG 241 (247)
T ss_dssp -CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -CCCcCHHHHHHHHHHHcCccccCCcCCEEEECC
Confidence 358899999999999987532 233566644
No 231
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=99.89 E-value=3.6e-22 Score=172.52 Aligned_cols=231 Identities=14% Similarity=0.102 Sum_probs=155.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCC----------cHHHHHHHhc-CCCCCCcEEEEecccCCCCCch
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPD----------NKKKVKHLLE-LPKASTHLTLWKADLAEEGNFD 72 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~----------~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~ 72 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+.+ +.+.++.... ......++..+.+|++|.+++.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 89 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR 89 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 3689999999999999999999999999999998422 2233322211 1111257899999999999887
Q ss_pred hhhC-------CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccC
Q 040253 73 EPIR-------GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEE 136 (338)
Q Consensus 73 ~~~~-------~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~ 136 (338)
++++ ++|++||+||..... ..+..+..+++|+.++.++++++.. .+...++|++||...+.
T Consensus 90 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~--- 166 (277)
T 3tsc_A 90 KVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMK--- 166 (277)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTS---
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCC---
Confidence 7664 699999999865422 2233456789999999999887543 22136899999987653
Q ss_pred CCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhc
Q 040253 137 HRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPI 213 (338)
Q Consensus 137 ~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~ 213 (338)
+......|+.+|.+.+.+.+.++.++ |+++++++||.+..+.................
T Consensus 167 -------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~ 227 (277)
T 3tsc_A 167 -------------------MQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETN 227 (277)
T ss_dssp -------------------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTC
T ss_pred -------------------CCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhccccc
Confidence 11234589999999999999999885 89999999999987653211000000000000
Q ss_pred ccCCCCCCCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEecC
Q 040253 214 TRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSSH 256 (338)
Q Consensus 214 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~~ 256 (338)
......+.......+.+.+|+|+++++++.... . +..+++.+.
T Consensus 228 ~~~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG 273 (277)
T 3tsc_A 228 PQLSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQG 273 (277)
T ss_dssp GGGTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCC
Confidence 000011111111258899999999999997543 2 345666543
No 232
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=99.89 E-value=6.7e-23 Score=176.60 Aligned_cols=227 Identities=12% Similarity=0.041 Sum_probs=159.3
Q ss_pred CCcEEEEeCCc--hhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 4 IAETVCVTGAS--GFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 4 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
..|+||||||+ |+||.+++++|+++|++|++++|+....+..+.+.... +++.++.+|++|.+++.++++
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~ 89 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF---GSELVFPCDVADDAQIDALFASLKTH 89 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc---CCcEEEECCCCCHHHHHHHHHHHHHH
Confidence 46899999999 99999999999999999999999866555555443321 357899999999998887764
Q ss_pred --CccEEEEecccCCC----------CCCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcC
Q 040253 77 --GCTGVFHLATPMDF----------ESKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYD 143 (338)
Q Consensus 77 --~~d~vi~~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~ 143 (338)
++|++||+||.... ...+.....+++|+.++.++++++...- +..++|++||...+.
T Consensus 90 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~---------- 159 (271)
T 3ek2_A 90 WDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAER---------- 159 (271)
T ss_dssp CSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTS----------
T ss_pred cCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccccc----------
Confidence 68999999986432 1223345688999999999999887652 135899999987653
Q ss_pred CCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCC
Q 040253 144 ETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHY 220 (338)
Q Consensus 144 e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+..+..... . ............ ...
T Consensus 160 ------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~-~~~~~~~~~~~~-~~~ 224 (271)
T 3ek2_A 160 ------------AIPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGI-K-SFGKILDFVESN-SPL 224 (271)
T ss_dssp ------------BCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCC-H-HHHHHHHHHHHH-STT
T ss_pred ------------CCCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcc-c-chHHHHHHHHhc-CCc
Confidence 11245689999999999999998875 89999999999987653321 1 101111100011 111
Q ss_pred CCCCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEe-cCCCCHHHH
Q 040253 221 PIIKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICS-SHPATILEL 263 (338)
Q Consensus 221 ~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~-~~~~t~~e~ 263 (338)
.++...+|+|+++++++.... ..| .+++. +...++.++
T Consensus 225 -----~~~~~pedva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~ 266 (271)
T 3ek2_A 225 -----KRNVTIEQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGM 266 (271)
T ss_dssp -----SSCCCHHHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC
T ss_pred -----CCCCCHHHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhh
Confidence 457899999999999997532 234 56774 444444443
No 233
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=99.88 E-value=3.5e-22 Score=173.78 Aligned_cols=217 Identities=14% Similarity=0.070 Sum_probs=154.0
Q ss_pred CcEEEEeCCchh--hHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 5 AETVCVTGASGF--IGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 5 ~~~ilVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
+|++|||||+|+ ||.+++++|+++|++|++++|+....+....+.... .++.++.+|++|.+++.++++
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL---GAFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH---TCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---CCceEEECCCCCHHHHHHHHHHHHHhc
Confidence 579999999998 999999999999999999999854333333332211 468899999999998887764
Q ss_pred -CccEEEEecccCC---------CCCCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCC
Q 040253 77 -GCTGVFHLATPMD---------FESKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 77 -~~d~vi~~a~~~~---------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
++|++||+||... ....+.....+++|+.++.++++++...- ...++|++||...+.
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~------------ 175 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEK------------ 175 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTS------------
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhcc------------
Confidence 7999999999653 11223345688999999999999886542 146999999987663
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCC-hhHHHhhhhcccCCCCCC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMP-PSLITALSPITRNEAHYP 221 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~-~~~~~~~~~~~~~~~~~~ 221 (338)
+......|+.+|.+.+.+.+.++.++ |+++++++||.+..+....... ........ ... ..
T Consensus 176 ----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~--p~- 240 (293)
T 3grk_A 176 ----------VMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNE--YNA--PL- 240 (293)
T ss_dssp ----------BCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHH--HHS--TT-
T ss_pred ----------CCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHH--hcC--CC-
Confidence 11234589999999999999998875 8999999999998865332111 11111110 011 11
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
.++...+|+|+++++++.... ..| .+++.+
T Consensus 241 ----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 273 (293)
T 3grk_A 241 ----RRTVTIDEVGDVGLYFLSDLSRSVTGEVHHADS 273 (293)
T ss_dssp ----SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ----CCCCCHHHHHHHHHHHcCccccCCcceEEEECC
Confidence 457889999999999987533 234 566644
No 234
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=99.88 E-value=1.9e-22 Score=173.46 Aligned_cols=206 Identities=14% Similarity=0.092 Sum_probs=145.7
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|++|||||+|+||++++++|+++|++|++++|+.+.......... .++.++.+|++|.+++.++++ +
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 102 (272)
T 4dyv_A 28 KKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG-----DDALCVPTDVTDPDSVRALFTATVEKFGR 102 (272)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT-----SCCEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC-----CCeEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 5789999999999999999999999999999998765554433222 468999999999998887765 7
Q ss_pred ccEEEEecccCCC------CCCCccchhhhhhhHHHHHHHHHHHhC----C-CccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 78 CTGVFHLATPMDF------ESKDPENEVIRPTINGMVSIMRACKNA----K-TVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 78 ~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
+|++||+||.... ...+..+..+++|+.++.++.+++... + ...++|++||...+.
T Consensus 103 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~------------- 169 (272)
T 4dyv_A 103 VDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS------------- 169 (272)
T ss_dssp CCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS-------------
T ss_pred CCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC-------------
Confidence 9999999996432 112233578899999988888776432 2 136899999986653
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+..+....... . . .......
T Consensus 170 ---------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~----~------~~~~~~~ 229 (272)
T 4dyv_A 170 ---------PRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKA-G----V------PQADLSI 229 (272)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-----------------------------
T ss_pred ---------CCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcc-c----c------hhhhhcc
Confidence 11245689999999999999998874 8999999999998764221100 0 0 0000000
Q ss_pred CCCccccHHHHHHHHHHhhcCCCCC
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPNAK 248 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~~~ 248 (338)
...++.+++|+|+++++++..+...
T Consensus 230 ~~~~~~~pedvA~~v~fL~s~~~~~ 254 (272)
T 4dyv_A 230 KVEPVMDVAHVASAVVYMASLPLDA 254 (272)
T ss_dssp ------CHHHHHHHHHHHHHSCTTS
T ss_pred cccCCCCHHHHHHHHHHHhCCCCcC
Confidence 1135889999999999999976653
No 235
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=99.88 E-value=1.5e-22 Score=169.23 Aligned_cols=203 Identities=14% Similarity=0.078 Sum_probs=149.4
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC---Ccc
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---GCT 79 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d 79 (338)
..+|++|||||+|+||++++++|+++|++|++++|+.. +|++|++++.++++ ++|
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------------~D~~~~~~v~~~~~~~g~id 61 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------------LDISDEKSVYHYFETIGAFD 61 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------------CCTTCHHHHHHHHHHHCSEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------------cCCCCHHHHHHHHHHhCCCC
Confidence 45689999999999999999999999999999988642 69999988887775 799
Q ss_pred EEEEecccCC-C-----CCCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCCCchhh
Q 040253 80 GVFHLATPMD-F-----ESKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDF 152 (338)
Q Consensus 80 ~vi~~a~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~ 152 (338)
++||+||... . ...+..+..+++|+.++.++++++...- +..++|++||...+.
T Consensus 62 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~------------------- 122 (223)
T 3uce_A 62 HLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRK------------------- 122 (223)
T ss_dssp EEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTS-------------------
T ss_pred EEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhcc-------------------
Confidence 9999999652 1 1122334678899999999999987653 134899999987663
Q ss_pred hhhccCCCchHHHHHHHHHHHHHHHHHHcC-ccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccH
Q 040253 153 VRSVKMTGWMYFVSKTLAEQAAWKFAEENN-IDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHL 231 (338)
Q Consensus 153 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v 231 (338)
+..+...|+.+|...+.+.+.++.+++ +++++++||.+.++................... .... .++.+.
T Consensus 123 ---~~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~ 193 (223)
T 3uce_A 123 ---VVANTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQS-HLPV-----GKVGEA 193 (223)
T ss_dssp ---CCTTCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHH-HSTT-----CSCBCH
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhh-cCCC-----CCccCH
Confidence 112456899999999999999999875 999999999998875433221111111111101 1111 468899
Q ss_pred HHHHHHHHHhhcCCCCCC-ceEEec
Q 040253 232 DDLCSAHIFLFEHPNAKG-RYICSS 255 (338)
Q Consensus 232 ~D~a~~~~~~l~~~~~~~-~~~~~~ 255 (338)
+|+|++++.+++.....| .+++.+
T Consensus 194 ~dvA~~~~~l~~~~~~tG~~i~vdg 218 (223)
T 3uce_A 194 SDIAMAYLFAIQNSYMTGTVIDVDG 218 (223)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEEEST
T ss_pred HHHHHHHHHHccCCCCCCcEEEecC
Confidence 999999999998655445 566644
No 236
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=99.88 E-value=7.6e-22 Score=170.72 Aligned_cols=218 Identities=10% Similarity=0.016 Sum_probs=156.3
Q ss_pred CCcEEEEeCCchh--hHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 4 IAETVCVTGASGF--IGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
.+|+|+||||+|+ ||.+++++|+++|++|++++|+. ..+..+.+.... +++.++.+|++|.+++.++++
T Consensus 25 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~l~~~~---~~~~~~~~Dl~~~~~v~~~~~~~~~~ 100 (280)
T 3nrc_A 25 AGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ-FKDRVEKLCAEF---NPAAVLPCDVISDQEIKDLFVELGKV 100 (280)
T ss_dssp TTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT-CHHHHHHHHGGG---CCSEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch-HHHHHHHHHHhc---CCceEEEeecCCHHHHHHHHHHHHHH
Confidence 3589999999977 99999999999999999999987 333344333221 458899999999998877664
Q ss_pred --CccEEEEecccCCC----------CCCCccchhhhhhhHHHHHHHHHHHhCC--CccEEEEecCceeeeccCCCCCCc
Q 040253 77 --GCTGVFHLATPMDF----------ESKDPENEVIRPTINGMVSIMRACKNAK--TVRRLVFTSSAGTLDVEEHRKPVY 142 (338)
Q Consensus 77 --~~d~vi~~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~~ 142 (338)
++|+|||+||.... ...+.....+++|+.++.++++++...- ...++|++||...+.
T Consensus 101 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~--------- 171 (280)
T 3nrc_A 101 WDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEK--------- 171 (280)
T ss_dssp CSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTS---------
T ss_pred cCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccccc---------
Confidence 58999999996542 2223345678999999999998876431 146999999987663
Q ss_pred CCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCC
Q 040253 143 DETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAH 219 (338)
Q Consensus 143 ~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 219 (338)
+..+...|+.+|.+.+.+.+.++.+ .|+++++++||.+..+........ .......... ..
T Consensus 172 -------------~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~--~~~~~~~~~~-~p 235 (280)
T 3nrc_A 172 -------------AMPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNF--KKMLDYNAMV-SP 235 (280)
T ss_dssp -------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTH--HHHHHHHHHH-ST
T ss_pred -------------CCCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcch--HHHHHHHHhc-CC
Confidence 1124568999999999999998877 489999999999987653321110 0001100010 11
Q ss_pred CCCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 220 YPIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 220 ~~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
. ..+...+|+|+++++++.... . +..+++.+
T Consensus 236 ~-----~~~~~pedvA~~v~~l~s~~~~~~tG~~i~vdg 269 (280)
T 3nrc_A 236 L-----KKNVDIMEVGNTVAFLCSDMATGITGEVVHVDA 269 (280)
T ss_dssp T-----CSCCCHHHHHHHHHHTTSGGGTTCCSCEEEEST
T ss_pred C-----CCCCCHHHHHHHHHHHhCcccCCcCCcEEEECC
Confidence 1 457889999999999997533 2 44566644
No 237
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=99.88 E-value=1.6e-22 Score=172.79 Aligned_cols=225 Identities=14% Similarity=0.125 Sum_probs=144.6
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----CccE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR----GCTG 80 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----~~d~ 80 (338)
||+|+||||+|+||++++++|+++|++|++++|+.+... . . +.+|++|.+++.++++ ++|+
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~--~-~~~Dl~~~~~v~~~~~~~~~~id~ 65 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI------------A--D-LSTAEGRKQAIADVLAKCSKGMDG 65 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE------------C--C-TTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc------------c--c-cccCCCCHHHHHHHHHHhCCCCCE
Confidence 478999999999999999999999999999999865421 0 1 6789999888888775 4699
Q ss_pred EEEecccCCCCCCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCC---CCcCCCCCCchh-h
Q 040253 81 VFHLATPMDFESKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRK---PVYDETSWSDLD-F 152 (338)
Q Consensus 81 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~---~~~~e~~~~~~~-~ 152 (338)
|||+||.... ..+.+..+++|+.++.++++++. +.+ ..++|++||...+....... ..+.+.++.... .
T Consensus 66 lv~~Ag~~~~--~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (257)
T 1fjh_A 66 LVLCAGLGPQ--TKVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAI 142 (257)
T ss_dssp EEECCCCCTT--CSSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHH
T ss_pred EEECCCCCCC--cccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccchhhhhhh
Confidence 9999996541 13466899999999999988875 334 57999999988773110000 000000000000 0
Q ss_pred hh--hccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccC-CCCCCCCCCC
Q 040253 153 VR--SVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRN-EAHYPIIKQG 226 (338)
Q Consensus 153 ~~--~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 226 (338)
.. .+..+...|+.+|.+.+.+++.++.+ +|+++++++||.+.++........... ...... ... ..
T Consensus 143 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~---~~~~~~~~~~-----~~ 214 (257)
T 1fjh_A 143 VEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRY---GESIAKFVPP-----MG 214 (257)
T ss_dssp HHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------------------CCCS-----TT
T ss_pred hhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhH---HHHHHhcccc-----cC
Confidence 00 01124568999999999999988877 489999999999988753321010000 000000 001 13
Q ss_pred ccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 227 QFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 227 ~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
.+++.+|+|++++.++..+. ..| .+++.+
T Consensus 215 ~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdg 246 (257)
T 1fjh_A 215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDG 246 (257)
T ss_dssp SCCCTHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred CCCCHHHHHHHHHHHhCchhcCCcCCEEEECC
Confidence 58899999999999997642 234 455644
No 238
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=99.88 E-value=5.2e-22 Score=170.61 Aligned_cols=216 Identities=17% Similarity=0.183 Sum_probs=154.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCC-CcHHHH-HHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDP-DNKKKV-KHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
++|+|+||||+|+||++++++|+++|++|+++.++. ...... +.+... ..++.++.+|++|.+++.++++
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~---~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 101 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN---GGNGRLLSFDVANREQCREVLEHEIAQ 101 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc---CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence 457899999999999999999999999997766543 332222 222221 2578999999999998887765
Q ss_pred --CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH-----hCCCccEEEEecCceeeeccCCCCCCcCC
Q 040253 77 --GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK-----NAKTVRRLVFTSSAGTLDVEEHRKPVYDE 144 (338)
Q Consensus 77 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~-----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e 144 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||...+.
T Consensus 102 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~-~g~iv~isS~~~~~----------- 169 (267)
T 4iiu_A 102 HGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQ-GGRIITLSSVSGVM----------- 169 (267)
T ss_dssp HCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTS-CEEEEEECCHHHHH-----------
T ss_pred hCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC-CcEEEEEcchHhcc-----------
Confidence 799999999865421 223345788999999999988763 334 57999999987663
Q ss_pred CCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCC
Q 040253 145 TSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYP 221 (338)
Q Consensus 145 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+.++..... ........ .. ...
T Consensus 170 -----------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~----~~-~p~- 231 (267)
T 4iiu_A 170 -----------GNRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME-ESALKEAM----SM-IPM- 231 (267)
T ss_dssp -----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-HHHHHHHH----HT-CTT-
T ss_pred -----------CCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-HHHHHHHH----hc-CCC-
Confidence 11245689999999999998888775 89999999999988764322 11111111 11 111
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEecC
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSSH 256 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~~ 256 (338)
.++.+.+|+|+++++++.... . +..+++.++
T Consensus 232 ----~~~~~~edva~~~~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 232 ----KRMGQAEEVAGLASYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp ----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred ----CCCcCHHHHHHHHHHHhCCcccCccCCEEEeCCC
Confidence 458899999999999997533 2 445666543
No 239
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=99.88 E-value=1.5e-21 Score=169.17 Aligned_cols=220 Identities=15% Similarity=0.099 Sum_probs=154.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc-HHHH-HHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN-KKKV-KHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+... .+.. +.+... ..++.++.+|++|.+++.++++
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~ 104 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN---GSDAACVKANVGVVEDIVRMFEEAVKI 104 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---TCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh---CCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999999999999998643 2222 222211 1468899999999988777653
Q ss_pred --CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC--CCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 --GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA--KTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 --~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++... + ..++|++||...+. .
T Consensus 105 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~-~g~iv~isS~~~~~--~----------- 170 (283)
T 1g0o_A 105 FGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI-GGRLILMGSITGQA--K----------- 170 (283)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT-TCEEEEECCGGGTC--S-----------
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc-CCeEEEEechhhcc--C-----------
Confidence 689999999965421 12334567999999999999988765 4 57999999976542 1
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCC----------CChhHHHhhhhcc
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSS----------MPPSLITALSPIT 214 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~----------~~~~~~~~~~~~~ 214 (338)
...+...|+.+|...+.+.+.++.++ |+++++++||.+.++..... .......... .
T Consensus 171 --------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 240 (283)
T 1g0o_A 171 --------AVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYA--A 240 (283)
T ss_dssp --------SCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHH--H
T ss_pred --------CCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHH--h
Confidence 00125689999999999999988764 89999999999987631100 0000000000 0
Q ss_pred cCCCCCCCCCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 215 RNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 215 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
...... .++.+.+|+|+++++++.... ..| .+++.+
T Consensus 241 ~~~~p~-----~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdg 279 (283)
T 1g0o_A 241 VQWSPL-----RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDG 279 (283)
T ss_dssp HHSCTT-----CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred hcCCCC-----CCCcCHHHHHHHHHHHhCccccCcCCCEEEeCC
Confidence 001111 358899999999999997543 234 556644
No 240
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=99.88 E-value=1.8e-21 Score=167.46 Aligned_cols=218 Identities=17% Similarity=0.100 Sum_probs=155.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCC-cHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPD-NKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+.. .......... ....++.++.+|++|.+++.++++
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIE--QAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH--HTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH--hcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4689999999999999999999999999999877653 2222222111 112578999999999998887765
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC-CCccEEEEecCceeeeccCCCCCCcCCCCCCc
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA-KTVRRLVFTSSAGTLDVEEHRKPVYDETSWSD 149 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~ 149 (338)
++|++||+||..... ..+..+..+++|+.++.++++++... ....++|++||..... .
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~--~------------- 172 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAEL--V------------- 172 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTC--C-------------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhcc--C-------------
Confidence 799999999865421 22334578899999999999988654 1246899999864331 0
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCC
Q 040253 150 LDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQG 226 (338)
Q Consensus 150 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (338)
+.++...|+.+|.+.+.+.+.++.++ |+++++++||.+.++...... ........ . ... .
T Consensus 173 ------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-~~~~~~~~---~--~~~-----~ 235 (271)
T 3v2g_A 173 ------PWPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADG-DHAEAQRE---R--IAT-----G 235 (271)
T ss_dssp ------CSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSC-SSHHHHHH---T--CTT-----S
T ss_pred ------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccc-hhHHHHHh---c--CCC-----C
Confidence 11245689999999999999998875 899999999999987643211 11111111 1 111 4
Q ss_pred ccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 227 QFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 227 ~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
++...+|+|+++++++.... . +..+++.+
T Consensus 236 r~~~pedvA~~v~fL~s~~~~~itG~~i~vdG 267 (271)
T 3v2g_A 236 SYGEPQDIAGLVAWLAGPQGKFVTGASLTIDG 267 (271)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred CCCCHHHHHHHHHHHhCcccCCccCCEEEeCc
Confidence 57899999999999986432 2 34566644
No 241
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=99.88 E-value=4.2e-22 Score=171.39 Aligned_cols=224 Identities=14% Similarity=0.119 Sum_probs=154.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|+++||||+|+||.+++++|+++|++|++++|+++....+.... .++.++.+|++|.+++.++++ +
T Consensus 9 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (270)
T 1yde_A 9 GKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL------PGAVFILCDVTQEDDVKTLVSETIRRFGR 82 (270)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC------TTEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------cCCeEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 579999999999999999999999999999999865544433211 347899999999998887764 7
Q ss_pred ccEEEEecccCCCC------CCCccchhhhhhhHHHHHHHHHHHhC---CCccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 78 CTGVFHLATPMDFE------SKDPENEVIRPTINGMVSIMRACKNA---KTVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 78 ~d~vi~~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
+|++||+||..... ..+..+..+++|+.++.++++++... + ..++|++||...+. .
T Consensus 83 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~--~------------ 147 (270)
T 1yde_A 83 LDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS-QGNVINISSLVGAI--G------------ 147 (270)
T ss_dssp CCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCHHHHH--C------------
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC-CCEEEEEcCccccC--C------------
Confidence 89999999864311 11223567899999999998887532 2 36999999976542 1
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCC---CCChhHHHhhhhcccCCCCCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTS---SMPPSLITALSPITRNEAHYPI 222 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 222 (338)
......|+.+|...+.+.+.++.+ +|+++++++||.++++.... ............. . ..++
T Consensus 148 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~-~-~~p~-- 215 (270)
T 1yde_A 148 --------QAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGM-L-AQPL-- 215 (270)
T ss_dssp --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHH-H-TSTT--
T ss_pred --------CCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHh-h-cCCC--
Confidence 113458999999999999999876 48999999999999874210 0000000000000 0 1111
Q ss_pred CCCCccccHHHHHHHHHHhhcCC-CC-CCceEEec-CCCCHHHHH
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHP-NA-KGRYICSS-HPATILELA 264 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~-~~-~~~~~~~~-~~~t~~e~~ 264 (338)
.++...+|+|+++++++... .. +..+.+.+ ..+...+.+
T Consensus 216 ---~r~~~p~dva~~v~~L~s~~~~itG~~i~vdGG~~~~~~~~~ 257 (270)
T 1yde_A 216 ---GRMGQPAEVGAAAVFLASEANFCTGIELLVTGGAELGYGCKA 257 (270)
T ss_dssp ---SSCBCHHHHHHHHHHHHHHCTTCCSCEEEESTTTTSCC----
T ss_pred ---CCCcCHHHHHHHHHHHcccCCCcCCCEEEECCCeecccCcCc
Confidence 35789999999999988642 22 33566643 445444433
No 242
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=99.88 E-value=4e-22 Score=169.52 Aligned_cols=202 Identities=18% Similarity=0.135 Sum_probs=147.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhc-CCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLE-LPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+.+.......... ......++.++.+|++|.+++.++++
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 46899999999999999999999999999999998766555433221 11111468899999999988877664
Q ss_pred -CccEEEEecccCCCCCC----CccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 -GCTGVFHLATPMDFESK----DPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||....... +..+..+++|+.++..+++++. +.+ ..++|++||...+.
T Consensus 86 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-------------- 150 (250)
T 3nyw_A 86 GAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKY-------------- 150 (250)
T ss_dssp CCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC-------------------
T ss_pred CCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcC--------------
Confidence 69999999996542211 2234678999999999988773 334 57999999976653
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+..+.. .. . .... .
T Consensus 151 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~--------~~-~----~~~~-----~ 204 (250)
T 3nyw_A 151 --------GFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMA--------KK-A----GTPF-----K 204 (250)
T ss_dssp ----------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHH--------HH-T----TCCS-----C
T ss_pred --------CCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchh--------hh-c----CCCc-----c
Confidence 11235589999999999999998875 89999999998865321 00 0 0110 1
Q ss_pred CCccccHHHHHHHHHHhhcCCC
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~ 246 (338)
...+++.+|+|++++.++..+.
T Consensus 205 ~~~~~~p~dva~~v~~l~s~~~ 226 (250)
T 3nyw_A 205 DEEMIQPDDLLNTIRCLLNLSE 226 (250)
T ss_dssp GGGSBCHHHHHHHHHHHHTSCT
T ss_pred cccCCCHHHHHHHHHHHHcCCC
Confidence 1358999999999999998754
No 243
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=99.88 E-value=1.6e-22 Score=169.87 Aligned_cols=197 Identities=17% Similarity=0.160 Sum_probs=143.9
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC----ccE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG----CTG 80 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~----~d~ 80 (338)
||+||||||+|+||.+++++|+++|++|++++|+.+......... ..++.++.+|++|.+++.++++. .|+
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~ 75 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL-----SNNVGYRARDLASHQEVEQLFEQLDSIPST 75 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC-----SSCCCEEECCTTCHHHHHHHHHSCSSCCSE
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-----hhccCeEeecCCCHHHHHHHHHHHhhcCCE
Confidence 578999999999999999999999999999999876555443322 15688999999999998888764 499
Q ss_pred EEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhCC--CccEEEEecCceeeeccCCCCCCcCCCCCCchhhh
Q 040253 81 VFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNAK--TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFV 153 (338)
Q Consensus 81 vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~ 153 (338)
|||+||..... ..+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 76 lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~-------------------- 135 (230)
T 3guy_A 76 VVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQ-------------------- 135 (230)
T ss_dssp EEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTS--------------------
T ss_pred EEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCC--------------------
Confidence 99999864421 122334678999999999988875431 123899999987663
Q ss_pred hhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCcccc
Q 040253 154 RSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVH 230 (338)
Q Consensus 154 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 230 (338)
+..+...|+.+|.+.+.+.+.++.++ |++++.++||.+..+..... ..... ...+.+
T Consensus 136 --~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-------------~~~~~-----~~~~~~ 195 (230)
T 3guy_A 136 --PKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETS-------------GKSLD-----TSSFMS 195 (230)
T ss_dssp --CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC----------------------------------CCC
T ss_pred --CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhc-------------CCCCC-----cccCCC
Confidence 11245689999999999999999886 79999999998876532110 00000 146889
Q ss_pred HHHHHHHHHHhhcCCC
Q 040253 231 LDDLCSAHIFLFEHPN 246 (338)
Q Consensus 231 v~D~a~~~~~~l~~~~ 246 (338)
.+|+|++++.++.++.
T Consensus 196 ~~dvA~~i~~l~~~~~ 211 (230)
T 3guy_A 196 AEDAALMIHGALANIG 211 (230)
T ss_dssp HHHHHHHHHHHCCEET
T ss_pred HHHHHHHHHHHHhCcC
Confidence 9999999999998653
No 244
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=99.88 E-value=3.6e-22 Score=173.08 Aligned_cols=217 Identities=18% Similarity=0.171 Sum_probs=154.7
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC---eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY---AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
+|++|||||+|+||.+++++|+++|+ +|++++|+.+....+...........++.++.+|++|.+++.++++
T Consensus 33 ~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 112 (287)
T 3rku_A 33 KKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQE 112 (287)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGG
T ss_pred CCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 57999999999999999999999987 9999999876655544332211112578999999999998887764
Q ss_pred --CccEEEEecccCC-C-----CCCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCC
Q 040253 77 --GCTGVFHLATPMD-F-----ESKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDE 144 (338)
Q Consensus 77 --~~d~vi~~a~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e 144 (338)
++|++||+||... . ...+..+..+++|+.++.++++++ ++.+ ..++|++||...+.
T Consensus 113 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~----------- 180 (287)
T 3rku_A 113 FKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRD----------- 180 (287)
T ss_dssp GCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS-----------
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcC-----------
Confidence 6899999999643 1 112234578899999999999887 3344 57999999986653
Q ss_pred CCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCC
Q 040253 145 TSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYP 221 (338)
Q Consensus 145 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (338)
+......|+.+|.+.+.+.+.++.++ |+++++++||.+..+................. .
T Consensus 181 -----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~------ 242 (287)
T 3rku_A 181 -----------AYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVY-K------ 242 (287)
T ss_dssp -----------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHH-T------
T ss_pred -----------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhh-c------
Confidence 11245689999999999999999884 89999999999987531100000000000000 0
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCCC---CCceEEe
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPNA---KGRYICS 254 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~ 254 (338)
....+..+|+|+++++++..+.. ++.+++.
T Consensus 243 ---~~~p~~pedvA~~v~~l~s~~~~~i~g~~i~v~ 275 (287)
T 3rku_A 243 ---DTTPLMADDVADLIVYATSRKQNTVIADTLIFP 275 (287)
T ss_dssp ---TSCCEEHHHHHHHHHHHHTSCTTEEEEEEEEEE
T ss_pred ---ccCCCCHHHHHHHHHHHhCCCCCeEecceEEee
Confidence 02245899999999999987653 3345554
No 245
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=99.88 E-value=9.3e-23 Score=176.15 Aligned_cols=219 Identities=11% Similarity=0.043 Sum_probs=155.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+.+........... ....++.++.+|++|.+++.++++
T Consensus 26 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 26 RDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAG-ATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHH-HHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH-hcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 358999999999999999999999999999999986654333221110 001578999999999988877664
Q ss_pred CccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||.... ...+..+..+++|+.++.++.+++.. .+ ..++|++||...+.
T Consensus 105 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~-------------- 169 (277)
T 4fc7_A 105 RIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNR-------------- 169 (277)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHH--------------
T ss_pred CCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCC--------------
Confidence 79999999985432 12233456889999999999988743 23 46999999987663
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCC--CChhHHHhhhhcccCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSS--MPPSLITALSPITRNEAHYPI 222 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 222 (338)
+......|+.+|.+.+.+.+.++.++ |+++++++||.+.++..... ......... .. ....
T Consensus 170 --------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~---~~-~~p~-- 235 (277)
T 4fc7_A 170 --------GQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTK---VT-ASPL-- 235 (277)
T ss_dssp --------TCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHH---HH-TSTT--
T ss_pred --------CCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHH---hc-cCCC--
Confidence 11234589999999999999998875 89999999999987631100 001110000 01 1111
Q ss_pred CCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
.++...+|+|+++++++.... . +..+++.+
T Consensus 236 ---~r~~~p~dvA~~v~fL~s~~~~~itG~~i~vdG 268 (277)
T 4fc7_A 236 ---QRLGNKTEIAHSVLYLASPLASYVTGAVLVADG 268 (277)
T ss_dssp ---SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ---CCCcCHHHHHHHHHHHcCCccCCcCCCEEEECC
Confidence 468899999999999997433 2 34566644
No 246
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=99.88 E-value=1.8e-22 Score=173.98 Aligned_cols=221 Identities=17% Similarity=0.115 Sum_probs=156.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------C
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------G 77 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~ 77 (338)
.+|+++||||+|+||.+++++|+++|++|++++|+.+........... ...++..+.+|++|.+++.++++ +
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIA--SGGTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHH--TTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHh--cCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 468999999999999999999999999999999988765554332211 12578999999999998887765 7
Q ss_pred ccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 78 CTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 78 ~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
+|++||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||...+.
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~--------------- 173 (275)
T 4imr_A 110 VDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLR--------------- 173 (275)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS---------------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCC---------------
Confidence 89999999864321 223345678999999999988873 334 57999999987653
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQ 225 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+..+......... ..............
T Consensus 174 -------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~p~----- 240 (275)
T 4imr_A 174 -------PKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQD-PEGWDEYVRTLNWM----- 240 (275)
T ss_dssp -------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHC-HHHHHHHHHHHSTT-----
T ss_pred -------CCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccC-hHHHHHHHhhcCcc-----
Confidence 11234579999999999999998886 899999999999765311000000 00000000000011
Q ss_pred CccccHHHHHHHHHHhhcCCCC---CCceEEec
Q 040253 226 GQFVHLDDLCSAHIFLFEHPNA---KGRYICSS 255 (338)
Q Consensus 226 ~~~i~v~D~a~~~~~~l~~~~~---~~~~~~~~ 255 (338)
.++...+|+|+++++++..... +..+++.+
T Consensus 241 ~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG 273 (275)
T 4imr_A 241 GRAGRPEEMVGAALFLASEACSFMTGETIFLTG 273 (275)
T ss_dssp CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred CCCcCHHHHHHHHHHHcCcccCCCCCCEEEeCC
Confidence 3578899999999999875432 33556644
No 247
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=99.88 E-value=5.3e-22 Score=169.84 Aligned_cols=208 Identities=17% Similarity=0.155 Sum_probs=147.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
++|++|||||+|+||++++++|+++|++|++++|+.+............ ..++..+.+|++|.+++.++++
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA--GGTALAQVLDVTDRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT--TCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc--CCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4689999999999999999999999999999999876655543322211 2578899999999988877664
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||..... ..+..+..+++|+.++..+.+++.. .+ ..++|++||...+.
T Consensus 81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~-------------- 145 (264)
T 3tfo_A 81 RIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALS-------------- 145 (264)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC--------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcc--------------
Confidence 799999999865421 1233456789999999988877643 34 57999999987663
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc-CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN-NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQG 226 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (338)
+......|+.+|...+.+.+.++.+. |+++++++||.+..+.......... ..... ....
T Consensus 146 --------~~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~----------~~~~~-~~~~ 206 (264)
T 3tfo_A 146 --------VVPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEET----------MAAMD-TYRA 206 (264)
T ss_dssp --------CCTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC---------------------------------
T ss_pred --------cCCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchhH----------HHHHH-hhhc
Confidence 11234589999999999999999886 8999999999987654221100000 00000 0001
Q ss_pred ccccHHHHHHHHHHhhcCCCC
Q 040253 227 QFVHLDDLCSAHIFLFEHPNA 247 (338)
Q Consensus 227 ~~i~v~D~a~~~~~~l~~~~~ 247 (338)
.+...+|+|++++.++..+..
T Consensus 207 ~~~~pedvA~~v~~l~s~~~~ 227 (264)
T 3tfo_A 207 IALQPADIARAVRQVIEAPQS 227 (264)
T ss_dssp -CCCHHHHHHHHHHHHHSCTT
T ss_pred cCCCHHHHHHHHHHHhcCCcc
Confidence 257899999999999988664
No 248
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=99.88 E-value=6.6e-22 Score=171.28 Aligned_cols=215 Identities=16% Similarity=0.158 Sum_probs=154.7
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------Cc
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------GC 78 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------~~ 78 (338)
+|++|||||+|+||.+++++|+++|++|++++|+.+....+..... .++.++.+|++|.+++.++++ ++
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~-----~~~~~~~~Dl~~~~~v~~~~~~~~~~~~i 104 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELG-----NRAEFVSTNVTSEDSVLAAIEAANQLGRL 104 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHHHTTSSEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC-----CceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999999998766555443331 578999999999998877664 68
Q ss_pred cEEEEecccCC-CC----------CCCccchhhhhhhHHHHHHHHHHHhC---------CCccEEEEecCceeeeccCCC
Q 040253 79 TGVFHLATPMD-FE----------SKDPENEVIRPTINGMVSIMRACKNA---------KTVRRLVFTSSAGTLDVEEHR 138 (338)
Q Consensus 79 d~vi~~a~~~~-~~----------~~~~~~~~~~~n~~~~~~l~~~~~~~---------~~~~~~v~~Ss~~v~~~~~~~ 138 (338)
|++||+++... .. ..+..+..+++|+.++.++++++... +...++|++||...+.
T Consensus 105 d~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~----- 179 (281)
T 3ppi_A 105 RYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYE----- 179 (281)
T ss_dssp EEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTS-----
T ss_pred CeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccC-----
Confidence 99999954322 11 11113578899999999998877521 1146899999987663
Q ss_pred CCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhccc
Q 040253 139 KPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITR 215 (338)
Q Consensus 139 ~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~ 215 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+..+..... ........ ..
T Consensus 180 -----------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-~~~~~~~~---~~ 238 (281)
T 3ppi_A 180 -----------------GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV-GEEALAKF---AA 238 (281)
T ss_dssp -----------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT-CHHHHHHH---HH
T ss_pred -----------------CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc-cHHHHHHH---Hh
Confidence 11245689999999999999988875 89999999999976532211 11111111 11
Q ss_pred CCCCCCCCCCCccccHHHHHHHHHHhhcCCCCCC-ceEEec
Q 040253 216 NEAHYPIIKQGQFVHLDDLCSAHIFLFEHPNAKG-RYICSS 255 (338)
Q Consensus 216 ~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~-~~~~~~ 255 (338)
..... .++.+.+|+|+++++++......| .+++.+
T Consensus 239 ~~~~~-----~~~~~pedvA~~v~~l~s~~~~tG~~i~vdG 274 (281)
T 3ppi_A 239 NIPFP-----KRLGTPDEFADAAAFLLTNGYINGEVMRLDG 274 (281)
T ss_dssp TCCSS-----SSCBCHHHHHHHHHHHHHCSSCCSCEEEEST
T ss_pred cCCCC-----CCCCCHHHHHHHHHHHHcCCCcCCcEEEECC
Confidence 11110 458899999999999998755555 456643
No 249
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=99.88 E-value=1.8e-22 Score=172.94 Aligned_cols=222 Identities=10% Similarity=0.102 Sum_probs=151.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhc-CCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLE-LPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|++|||||+|.||.+++++|+++|++|++++|...+.+..+.+.. ......++.++.+|++|.+++.++++
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999999999999887655444433221 11123578999999999998887764
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCCCc
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWSD 149 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~ 149 (338)
++|++||+||..... ..+..+..+++|+.++..+++++...- ...++|++||...+.
T Consensus 90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~---------------- 153 (262)
T 3ksu_A 90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAA---------------- 153 (262)
T ss_dssp CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHH----------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhcc----------------
Confidence 799999999965421 122344678899999999999987651 156899999987764
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCC
Q 040253 150 LDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQG 226 (338)
Q Consensus 150 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (338)
+......|+.+|.+.+.+.+.++.++ |++++++.||.+..+........... . ...... ...
T Consensus 154 ------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~---~-~~~~~~-----~~~ 218 (262)
T 3ksu_A 154 ------YTGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKEST---A-FHKSQA-----MGN 218 (262)
T ss_dssp ------HHCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC---------------------CCC
T ss_pred ------CCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHH---H-HHHhcC-----ccc
Confidence 11234579999999999999999886 89999999998865431110000000 0 000000 114
Q ss_pred ccccHHHHHHHHHHhhcCCC-CCC-ceEEecC
Q 040253 227 QFVHLDDLCSAHIFLFEHPN-AKG-RYICSSH 256 (338)
Q Consensus 227 ~~i~v~D~a~~~~~~l~~~~-~~~-~~~~~~~ 256 (338)
++...+|+|+++++++.... ..| .+++.+.
T Consensus 219 r~~~pedvA~~v~~L~s~~~~itG~~i~vdGg 250 (262)
T 3ksu_A 219 QLTKIEDIAPIIKFLTTDGWWINGQTIFANGG 250 (262)
T ss_dssp CSCCGGGTHHHHHHHHTTTTTCCSCEEEESTT
T ss_pred CCCCHHHHHHHHHHHcCCCCCccCCEEEECCC
Confidence 58899999999999987521 234 5566554
No 250
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}
Probab=99.88 E-value=4.2e-22 Score=169.88 Aligned_cols=213 Identities=16% Similarity=0.135 Sum_probs=152.1
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC--CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG--YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
+|+++||||+|+||++++++|++.| +.|++++|+.+....+..... .++.++.+|++|.+++.++++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 76 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG-----DRFFYVVGDITEDSVLKQLVNAAVKGH 76 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG-----GGEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC-----CceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 5899999999999999999999885 789888998765554443221 478999999999998887764
Q ss_pred -CccEEEEecccCCC------CCCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCC
Q 040253 77 -GCTGVFHLATPMDF------ESKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 77 -~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
++|++||+||.... ...+..+..+++|+.++.++.+++ ++.+ .++|++||...+.
T Consensus 77 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~------------ 142 (254)
T 3kzv_A 77 GKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNM------------ 142 (254)
T ss_dssp SCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCC------------
T ss_pred CCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhcc------------
Confidence 78999999996431 111233568899999999998887 3333 6899999987663
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc-CccEEEEcCCceeCCCCCCCCC--------hhHHHhhhhcccC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN-NIDFISIIPSLVVGPFLTSSMP--------PSLITALSPITRN 216 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilRp~~v~G~~~~~~~~--------~~~~~~~~~~~~~ 216 (338)
+..+...|+.+|...+.+.+.++.++ ++++++++||.+..+....... ........ ..
T Consensus 143 ----------~~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~ 209 (254)
T 3kzv_A 143 ----------YFSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFR---GL 209 (254)
T ss_dssp ----------SSCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHH---HH
T ss_pred ----------CCCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHH---HH
Confidence 11245689999999999999999886 8999999999998875432111 11111110 00
Q ss_pred CCCCCCCCCCccccHHHHHHHHHHhhcCCC---CCC-ceEEec
Q 040253 217 EAHYPIIKQGQFVHLDDLCSAHIFLFEHPN---AKG-RYICSS 255 (338)
Q Consensus 217 ~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~-~~~~~~ 255 (338)
... .++.+.+|+|+++++++.... ..| .+++.+
T Consensus 210 -~~~-----~r~~~p~dva~~v~~L~s~~~~~~itG~~i~vdg 246 (254)
T 3kzv_A 210 -KEN-----NQLLDSSVPATVYAKLALHGIPDGVNGQYLSYND 246 (254)
T ss_dssp -HTT-----C----CHHHHHHHHHHHHHCCCGGGTTCEEETTC
T ss_pred -Hhc-----CCcCCcccHHHHHHHHHhhcccCCCCccEEEecC
Confidence 011 468899999999999987653 344 455544
No 251
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=99.88 E-value=7.5e-22 Score=167.63 Aligned_cols=202 Identities=19% Similarity=0.213 Sum_probs=144.3
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------Cc
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------GC 78 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 78 (338)
|+++||||+|+||++++++|+++|++|++++|+.+.......... .++.++.+|++|.+++.++++ ++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 75 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELG-----DNLYIAQLDVRNRAAIEEMLASLPAEWCNI 75 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----TTEEEEECCTTCHHHHHHHHHTSCTTTCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc-----CceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 589999999999999999999999999999998655444433221 368899999999988877764 68
Q ss_pred cEEEEecccCC-C-----CCCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 79 TGVFHLATPMD-F-----ESKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 79 d~vi~~a~~~~-~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
|++||+||... . ...+..+..+++|+.++.++.+++. +.+ ..++|++||...+.
T Consensus 76 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~--------------- 139 (248)
T 3asu_A 76 DILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSW--------------- 139 (248)
T ss_dssp CEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS---------------
T ss_pred CEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhcc---------------
Confidence 99999998642 1 1122345688999999998888775 334 57999999986653
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeC-CCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVG-PFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+..+...|+.+|...+.+.+.++.+. |+++++++||.+.| +......... .... . ..+ .
T Consensus 140 -------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~-~~~~----~--~~~---~ 202 (248)
T 3asu_A 140 -------PYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGD-DGKA----E--KTY---Q 202 (248)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC------------------------------
T ss_pred -------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCc-hHHH----H--HHH---h
Confidence 11234589999999999999998875 89999999999984 4321100000 0000 0 000 0
Q ss_pred CCccccHHHHHHHHHHhhcCC
Q 040253 225 QGQFVHLDDLCSAHIFLFEHP 245 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~ 245 (338)
...++..+|+|+++++++..+
T Consensus 203 ~~~~~~p~dvA~~v~~l~s~~ 223 (248)
T 3asu_A 203 NTVALTPEDVSEAVWWVSTLP 223 (248)
T ss_dssp --CCBCHHHHHHHHHHHHHSC
T ss_pred ccCCCCHHHHHHHHHHHhcCC
Confidence 123579999999999999764
No 252
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=99.88 E-value=1e-21 Score=166.76 Aligned_cols=210 Identities=17% Similarity=0.146 Sum_probs=149.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
++|+++||||+|+||.+++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.++++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTA--AGAKVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--cCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 358999999999999999999999999999999986554443322111 12468999999999988877664
Q ss_pred CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhCC--CccEEEEecCceeeeccCCCCCCcCCCCCCc
Q 040253 77 GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNAK--TVRRLVFTSSAGTLDVEEHRKPVYDETSWSD 149 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~ 149 (338)
++|++||+||..... ..+..+..+++|+.++.++.+++...- ...++|++||...+. .
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~--~------------- 148 (247)
T 2jah_A 84 GLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRV--N------------- 148 (247)
T ss_dssp CCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTC--C-------------
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcC--C-------------
Confidence 799999999864321 112234678999999999988875431 016999999986653 1
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCC
Q 040253 150 LDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQG 226 (338)
Q Consensus 150 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (338)
..+...|+.+|...+.+.+.++.+. |+++++++||.+..+............... .. + +..
T Consensus 149 -------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~---~~----~--~~~ 212 (247)
T 2jah_A 149 -------VRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATKEMYE---QR----I--SQI 212 (247)
T ss_dssp -------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHHHHHH---HH----T--TTS
T ss_pred -------CCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhHHHHH---hc----c--ccc
Confidence 1234589999999999999888764 899999999999876432111111111111 10 0 112
Q ss_pred ccccHHHHHHHHHHhhcCCC
Q 040253 227 QFVHLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 227 ~~i~v~D~a~~~~~~l~~~~ 246 (338)
.++..+|+|++++.++..+.
T Consensus 213 ~~~~pedvA~~v~~l~s~~~ 232 (247)
T 2jah_A 213 RKLQAQDIAEAVRYAVTAPH 232 (247)
T ss_dssp CCBCHHHHHHHHHHHHHSCT
T ss_pred CCCCHHHHHHHHHHHhCCCc
Confidence 25899999999999997643
No 253
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=99.88 E-value=2.4e-22 Score=171.04 Aligned_cols=196 Identities=11% Similarity=0.077 Sum_probs=147.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
|+|+||||||+|+||++++++|+++|++|++++|+..... -..+.+|++|.+++.++++
T Consensus 21 m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~--------------~~~~~~d~~d~~~v~~~~~~~~~~~g 86 (251)
T 3orf_A 21 MSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA--------------DHSFTIKDSGEEEIKSVIEKINSKSI 86 (251)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS--------------SEEEECSCSSHHHHHHHHHHHHTTTC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------ccceEEEeCCHHHHHHHHHHHHHHcC
Confidence 5689999999999999999999999999999999876431 2467889999888877664
Q ss_pred CccEEEEecccCCCC------CCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCCCc
Q 040253 77 GCTGVFHLATPMDFE------SKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWSD 149 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~ 149 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 87 ~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~---------------- 150 (251)
T 3orf_A 87 KVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALN---------------- 150 (251)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS----------------
T ss_pred CCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhcc----------------
Confidence 579999999964321 122345678899999999999887643 135899999987663
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHHHHHHH-----cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 150 LDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE-----NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 150 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+..+...|+.+|.+.+.+++.++.+ .|+++++++||.+.++.. .... .. . .
T Consensus 151 ------~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~--------~~~~----~~-~-----~ 206 (251)
T 3orf_A 151 ------RTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTN--------RKYM----SD-A-----N 206 (251)
T ss_dssp ------CCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHH--------HHHC----TT-S-----C
T ss_pred ------CCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcch--------hhhc----cc-c-----c
Confidence 1124568999999999999999988 479999999998876431 0000 11 0 1
Q ss_pred CCccccHHHHHHHHHHhhcC---CCCCC-ceEE
Q 040253 225 QGQFVHLDDLCSAHIFLFEH---PNAKG-RYIC 253 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~---~~~~~-~~~~ 253 (338)
..++++.+|+|++++.++.. ....| .+++
T Consensus 207 ~~~~~~~~dva~~i~~l~~~~~~~~~tG~~i~v 239 (251)
T 3orf_A 207 FDDWTPLSEVAEKLFEWSTNSDSRPTNGSLVKF 239 (251)
T ss_dssp GGGSBCHHHHHHHHHHHHHCGGGCCCTTCEEEE
T ss_pred ccccCCHHHHHHHHHHHhcCccccCCcceEEEE
Confidence 14588999999999999987 22334 5555
No 254
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=99.88 E-value=1.3e-21 Score=164.97 Aligned_cols=201 Identities=22% Similarity=0.238 Sum_probs=147.7
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
+|+++||||+|+||++++++|+++|++|++++|+.+........... ....++.++.+|++|++++.++++ +
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQ-EQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH-HHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh-hcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 68999999999999999999999999999999987655443322110 012578999999999998887775 7
Q ss_pred ccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC---CCccEEEEecCceeeeccCCCCCCcCCCCCCc
Q 040253 78 CTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA---KTVRRLVFTSSAGTLDVEEHRKPVYDETSWSD 149 (338)
Q Consensus 78 ~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~ 149 (338)
+|++||+||..... ..+..+..+++|+.++.++++++... + ..++|++||...+.
T Consensus 81 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~-~~~ii~~sS~~~~~---------------- 143 (235)
T 3l77_A 81 VDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT-GGLALVTTSDVSAR---------------- 143 (235)
T ss_dssp CSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEECCGGGSS----------------
T ss_pred CCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCcEEEEecchhcc----------------
Confidence 89999999965422 22334568899999999999887542 2 35677777765442
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHHHHHHHc-CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCcc
Q 040253 150 LDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN-NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQF 228 (338)
Q Consensus 150 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (338)
..+....|+.+|.+.+.+.+.+..+. ++++++++||.+..+...... .. .....+
T Consensus 144 ------~~~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~------------~~------~~~~~~ 199 (235)
T 3l77_A 144 ------LIPYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKP------------GK------PKEKGY 199 (235)
T ss_dssp ------CCTTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCS------------CC------CGGGTC
T ss_pred ------cCCCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccC------------Cc------ccccCC
Confidence 11134589999999999999885554 899999999988765422110 00 001257
Q ss_pred ccHHHHHHHHHHhhcCCCC
Q 040253 229 VHLDDLCSAHIFLFEHPNA 247 (338)
Q Consensus 229 i~v~D~a~~~~~~l~~~~~ 247 (338)
+..+|+|++++.++..+..
T Consensus 200 ~~p~dva~~v~~l~~~~~~ 218 (235)
T 3l77_A 200 LKPDEIAEAVRCLLKLPKD 218 (235)
T ss_dssp BCHHHHHHHHHHHHTSCTT
T ss_pred CCHHHHHHHHHHHHcCCCC
Confidence 8999999999999987654
No 255
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=99.88 E-value=4e-22 Score=170.78 Aligned_cols=217 Identities=20% Similarity=0.227 Sum_probs=155.3
Q ss_pred CCC-CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC---
Q 040253 1 MGS-IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--- 76 (338)
Q Consensus 1 m~~-~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 76 (338)
|+. .+|+++||||+|+||.+++++|+++|++|++++|+.+........ .. .++.++.+|++|.+++.++++
T Consensus 1 m~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~---~~~~~~~~D~~~~~~v~~~~~~~~ 75 (263)
T 2a4k_A 1 MGRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA--LE---AEAIAVVADVSDPKAVEAVFAEAL 75 (263)
T ss_dssp -CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT--CC---SSEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH--hc---CceEEEEcCCCCHHHHHHHHHHHH
Confidence 543 468999999999999999999999999999999986554433221 11 468899999999988877664
Q ss_pred ----CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 ----GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 ----~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|++||+||..... ..+..+..+++|+.++.++++++...- ...++|++||...++ .
T Consensus 76 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~-~----------- 143 (263)
T 2a4k_A 76 EEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG-A----------- 143 (263)
T ss_dssp HHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC-H-----------
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhcC-C-----------
Confidence 589999999865421 112234678899999999999886542 136999999986652 0
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
.+...|+.+|...+.+.+.++.+. |+++++++||.+.++.... ......... ... ...
T Consensus 144 -----------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~-~~~~~~~~~---~~~-~p~--- 204 (263)
T 2a4k_A 144 -----------FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAG-LPPWAWEQE---VGA-SPL--- 204 (263)
T ss_dssp -----------HHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTT-SCHHHHHHH---HHT-STT---
T ss_pred -----------CCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhh-cCHHHHHHH---Hhc-CCC---
Confidence 123489999999999999888764 8999999999998875332 111111111 011 111
Q ss_pred CCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
..+.+.+|+|+++++++.... ..| .+++.+
T Consensus 205 --~~~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdg 237 (263)
T 2a4k_A 205 --GRAGRPEEVAQAALFLLSEESAYITGQALYVDG 237 (263)
T ss_dssp --CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred --CCCcCHHHHHHHHHHHhCccccCCcCCEEEECC
Confidence 358899999999999987543 234 556644
No 256
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=99.87 E-value=2.3e-21 Score=170.60 Aligned_cols=228 Identities=15% Similarity=0.111 Sum_probs=154.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCC---------cHHHHHHHhc-CCCCCCcEEEEecccCCCCCchh
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPD---------NKKKVKHLLE-LPKASTHLTLWKADLAEEGNFDE 73 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~ 73 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+.. ..+.++.... ......++.++.+|++|.+++.+
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 124 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA 124 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 3589999999999999999999999999999988632 1222222111 11112578999999999998887
Q ss_pred hhC-------CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCC
Q 040253 74 PIR-------GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEH 137 (338)
Q Consensus 74 ~~~-------~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~ 137 (338)
+++ ++|++||+||..... ..+..+..+++|+.++.++++++.. .+...+||++||...+.
T Consensus 125 ~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~---- 200 (317)
T 3oec_A 125 VVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLR---- 200 (317)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSS----
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcC----
Confidence 764 799999999965421 1233456789999999998887743 22246899999987663
Q ss_pred CCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcc
Q 040253 138 RKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPIT 214 (338)
Q Consensus 138 ~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~ 214 (338)
+......|+.+|.+.+.+.+.++.++ |+++++++||.+.++..... ...........
T Consensus 201 ------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~~~~~~~~ 260 (317)
T 3oec_A 201 ------------------GAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE--KLLKMFLPHLE 260 (317)
T ss_dssp ------------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH--HHHHHHCTTCS
T ss_pred ------------------CCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch--hhhhhhhhhcc
Confidence 11234589999999999999999885 89999999999987642110 00000000000
Q ss_pred cCC-----C--CCCCCCCCccccHHHHHHHHHHhhcCCC---CCCceEEec
Q 040253 215 RNE-----A--HYPIIKQGQFVHLDDLCSAHIFLFEHPN---AKGRYICSS 255 (338)
Q Consensus 215 ~~~-----~--~~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~~~~~~~ 255 (338)
... . ........++++.+|+|+++++++.... .+..+++.+
T Consensus 261 ~~~~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdG 311 (317)
T 3oec_A 261 NPTREDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDG 311 (317)
T ss_dssp SCCHHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred ccchhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECc
Confidence 000 0 0000001468999999999999986543 244567754
No 257
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=99.87 E-value=1.1e-21 Score=169.67 Aligned_cols=222 Identities=15% Similarity=0.176 Sum_probs=155.1
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
|...+|++|||||+|+||.+++++|+++|++|++++|+.+....+.... ..++.++.+|++|.+++.++++
T Consensus 1 M~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~ 75 (281)
T 3zv4_A 1 MKLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH-----GGNAVGVVGDVRSLQDQKRAAERCLA 75 (281)
T ss_dssp CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT-----BTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc-----CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 6667899999999999999999999999999999999876555443322 1578999999999988777654
Q ss_pred ---CccEEEEecccCCCCC------CC----ccchhhhhhhHHHHHHHHHHHhCC--CccEEEEecCceeeeccCCCCCC
Q 040253 77 ---GCTGVFHLATPMDFES------KD----PENEVIRPTINGMVSIMRACKNAK--TVRRLVFTSSAGTLDVEEHRKPV 141 (338)
Q Consensus 77 ---~~d~vi~~a~~~~~~~------~~----~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~ 141 (338)
++|++||+||...... .+ ..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 76 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------- 147 (281)
T 3zv4_A 76 AFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFY-------- 147 (281)
T ss_dssp HHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTS--------
T ss_pred hcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhcc--------
Confidence 6899999998643211 01 134577899999999988875431 125899999986653
Q ss_pred cCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc--CccEEEEcCCceeCCCCCCCCChhHHH------hhhhc
Q 040253 142 YDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN--NIDFISIIPSLVVGPFLTSSMPPSLIT------ALSPI 213 (338)
Q Consensus 142 ~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~------~~~~~ 213 (338)
+..+...|+.+|.+.+.+.+.++.++ +++++++.||.+..+............ .....
T Consensus 148 --------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 213 (281)
T 3zv4_A 148 --------------PNGGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADML 213 (281)
T ss_dssp --------------SSSSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHH
T ss_pred --------------CCCCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHH
Confidence 11234589999999999999999886 499999999999876432210000000 00000
Q ss_pred ccCCCCCCCCCCCccccHHHHHHHHHHhhcCCC---CCC-ceEEec
Q 040253 214 TRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN---AKG-RYICSS 255 (338)
Q Consensus 214 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~---~~~-~~~~~~ 255 (338)
...... .++...+|+|+++++++..+. ..| .+++.+
T Consensus 214 -~~~~p~-----~r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdG 253 (281)
T 3zv4_A 214 -KSVLPI-----GRMPALEEYTGAYVFFATRGDSLPATGALLNYDG 253 (281)
T ss_dssp -HHTCTT-----SSCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESS
T ss_pred -HhcCCC-----CCCCCHHHHHHHHHHhhcccccccccCcEEEECC
Confidence 011111 468899999999999997332 234 556644
No 258
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=99.87 E-value=5e-21 Score=166.17 Aligned_cols=226 Identities=16% Similarity=0.140 Sum_probs=155.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCC-------------cHHHHHHHhc-CCCCCCcEEEEecccCCCC
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPD-------------NKKKVKHLLE-LPKASTHLTLWKADLAEEG 69 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~-------------~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~ 69 (338)
.+|+++||||+|.||.+++++|+++|++|++++|+.+ ..+.++.... ......++.++.+|++|.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 89 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD 89 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 3689999999999999999999999999999998732 1233322211 1112357899999999999
Q ss_pred CchhhhC-------CccEEEEecccCCCC------CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceee
Q 040253 70 NFDEPIR-------GCTGVFHLATPMDFE------SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTL 132 (338)
Q Consensus 70 ~~~~~~~-------~~d~vi~~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~ 132 (338)
++.++++ ++|++||+||..... ..+..+..+++|+.++.++++++... +...++|++||...+
T Consensus 90 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 169 (286)
T 3uve_A 90 ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGL 169 (286)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhc
Confidence 8887764 799999999964422 12334568899999999998877432 213689999998766
Q ss_pred eccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHh
Q 040253 133 DVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITA 209 (338)
Q Consensus 133 ~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~ 209 (338)
. +......|+.+|...+.+.+.++.+ +|++++++.||.+..+..... .....
T Consensus 170 ~----------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~ 224 (286)
T 3uve_A 170 K----------------------AYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNE---GTFKM 224 (286)
T ss_dssp S----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSH---HHHHH
T ss_pred c----------------------CCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCccccc---chhhh
Confidence 3 1123458999999999999999888 489999999999987753320 00000
Q ss_pred hhhcccCCC---------CCCCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 210 LSPITRNEA---------HYPIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 210 ~~~~~~~~~---------~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
......... ...... .++.+.+|+|+++++++.... . +..+++.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdG 281 (286)
T 3uve_A 225 FRPDLENPGPDDMAPICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDA 281 (286)
T ss_dssp HCTTSSSCCHHHHHHHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred ccccccccchhhHHHHHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECC
Confidence 000000000 000001 468899999999999996543 2 34566644
No 259
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=99.87 E-value=5.1e-21 Score=165.89 Aligned_cols=205 Identities=15% Similarity=0.157 Sum_probs=148.7
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc-------HHHH-HHHhcCCCCCCcEEEEecccCCCCCch
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN-------KKKV-KHLLELPKASTHLTLWKADLAEEGNFD 72 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 72 (338)
|+..+|+++||||+|.||.+++++|+++|++|++++|+.+. .... +.+... ..++.++.+|++|.+++.
T Consensus 5 m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~ 81 (285)
T 3sc4_A 5 MSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA---GGQALPIVGDIRDGDAVA 81 (285)
T ss_dssp -CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH---TSEEEEEECCTTSHHHHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc---CCcEEEEECCCCCHHHHH
Confidence 44457899999999999999999999999999999998763 1111 111111 257899999999999888
Q ss_pred hhhC-------CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccC
Q 040253 73 EPIR-------GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEE 136 (338)
Q Consensus 73 ~~~~-------~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~ 136 (338)
++++ ++|++||+||..... ..+..+..+++|+.++.++.+++... + ..++|++||...+..
T Consensus 82 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~-- 158 (285)
T 3sc4_A 82 AAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLEP-- 158 (285)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCSG--
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhccC--
Confidence 7765 799999999965421 11223467789999999999987654 3 569999999765530
Q ss_pred CCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhc
Q 040253 137 HRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPI 213 (338)
Q Consensus 137 ~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~ 213 (338)
...+...|+.+|.+.+.+.+.++.++ |++++++.||.+... .......
T Consensus 159 -------------------~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t-------~~~~~~~--- 209 (285)
T 3sc4_A 159 -------------------KWLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVAT-------AAVQNLL--- 209 (285)
T ss_dssp -------------------GGSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCC-------HHHHHHH---
T ss_pred -------------------CCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCcccc-------HHHHhhc---
Confidence 11234689999999999999999884 899999999843321 1111111
Q ss_pred ccCCCCCCCCCCCccccHHHHHHHHHHhhcCCC
Q 040253 214 TRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 214 ~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 246 (338)
...... ..+...+|+|+++++++....
T Consensus 210 -~~~~~~-----~r~~~pedvA~~~~~l~s~~~ 236 (285)
T 3sc4_A 210 -GGDEAM-----ARSRKPEVYADAAYVVLNKPS 236 (285)
T ss_dssp -TSCCCC-----TTCBCTHHHHHHHHHHHTSCT
T ss_pred -cccccc-----cCCCCHHHHHHHHHHHhCCcc
Confidence 111111 457889999999999998754
No 260
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=99.87 E-value=6.6e-22 Score=166.85 Aligned_cols=187 Identities=14% Similarity=0.145 Sum_probs=141.3
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC--------
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------- 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------- 76 (338)
+|+||||||+|+||++++++|+++|++|++++|+++... ....++.+|++|.+++.++++
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 70 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------------DSNILVDGNKNWTEQEQSILEQTASSLQG 70 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------------SEEEECCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------------cccEEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 589999999999999999999999999999999876421 245778999999988777654
Q ss_pred -CccEEEEecccCCCCC------CCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 77 -GCTGVFHLATPMDFES------KDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
++|+|||+||...... .+..+..+++|+.++.++.+++...- ...++|++||...+.
T Consensus 71 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~--------------- 135 (236)
T 1ooe_A 71 SQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMG--------------- 135 (236)
T ss_dssp CCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS---------------
T ss_pred CCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhcc---------------
Confidence 7999999999643211 12235678899999999999887642 135899999987663
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHHcC-----ccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENN-----IDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-----~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+..+...|+.+|.+.+.+.+.++.+++ +++++++||.+.++... ... ... .
T Consensus 136 -------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~--------~~~----~~~-~---- 191 (236)
T 1ooe_A 136 -------PTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNR--------KWM----PNA-D---- 191 (236)
T ss_dssp -------CCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHH--------HHS----TTC-C----
T ss_pred -------CCCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchh--------hcC----CCc-c----
Confidence 112455899999999999999987754 99999999998765310 000 000 0
Q ss_pred CCCccccHHHHHHHHHHhhc
Q 040253 224 KQGQFVHLDDLCSAHIFLFE 243 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~ 243 (338)
...++..+|+|++++.++.
T Consensus 192 -~~~~~~~~dvA~~i~~~l~ 210 (236)
T 1ooe_A 192 -HSSWTPLSFISEHLLKWTT 210 (236)
T ss_dssp -GGGCBCHHHHHHHHHHHHH
T ss_pred -ccccCCHHHHHHHHHHHHc
Confidence 1246788999999997773
No 261
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=99.87 E-value=1.6e-21 Score=166.02 Aligned_cols=209 Identities=19% Similarity=0.181 Sum_probs=150.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEeccc--CCCCCchhhhC------
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADL--AEEGNFDEPIR------ 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~~~~~~~------ 76 (338)
+|++|||||+|+||.+++++|+++|++|++++|+.+............ ...++.++.+|+ +|.+++.++++
T Consensus 12 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (252)
T 3f1l_A 12 DRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE-TGRQPQWFILDLLTCTSENCQQLAQRIAVNY 90 (252)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-HSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-cCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence 579999999999999999999999999999999876554433221110 013678999999 88877766654
Q ss_pred -CccEEEEecccCCC------CCCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCC
Q 040253 77 -GCTGVFHLATPMDF------ESKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 77 -~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
++|++||+||.... ...+..+..+++|+.++.++++++ ++.+ ..++|++||...+.
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~------------ 157 (252)
T 3f1l_A 91 PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQ------------ 157 (252)
T ss_dssp SCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTS------------
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhcc------------
Confidence 79999999996421 111223467899999999999887 4444 57999999986653
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHcC--ccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENN--IDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+..+...|+.+|.+.+.+.+.++.+++ ++++++.||.+..+. ..... ...
T Consensus 158 ----------~~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~--------~~~~~----~~~------ 209 (252)
T 3f1l_A 158 ----------GRANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM--------RASAF----PTE------ 209 (252)
T ss_dssp ----------CCTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH--------HHHHC----TTC------
T ss_pred ----------CCCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch--------hhhhC----Ccc------
Confidence 112445899999999999999999874 899999998886432 00000 000
Q ss_pred CCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
....+...+|+++++++++.... . +..+++.+
T Consensus 210 ~~~~~~~p~dva~~~~~L~s~~~~~itG~~i~vdg 244 (252)
T 3f1l_A 210 DPQKLKTPADIMPLYLWLMGDDSRRKTGMTFDAQP 244 (252)
T ss_dssp CGGGSBCTGGGHHHHHHHHSGGGTTCCSCEEESSC
T ss_pred chhccCCHHHHHHHHHHHcCccccCCCCCEEEeCC
Confidence 01347789999999999987543 2 34566643
No 262
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=99.87 E-value=7.8e-22 Score=170.56 Aligned_cols=214 Identities=12% Similarity=0.065 Sum_probs=149.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+.+............ ....+.++.+|++|.+++.++++
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 110 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGR-TGNIVRAVVCDVGDPDQVAALFAAVRAEFA 110 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-HSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3578999999999999999999999999999999876554443221110 01235899999999998877764
Q ss_pred CccEEEEecccCCC------CCCCccchhhhhhhHHHHHHHHHHHhC----C-CccEEEEecCceeeeccCCCCCCcCCC
Q 040253 77 GCTGVFHLATPMDF------ESKDPENEVIRPTINGMVSIMRACKNA----K-TVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 77 ~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~----~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
++|++||+||.... ...+..+..+++|+.++..+.+++... + ...++|++||...+.
T Consensus 111 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~------------ 178 (281)
T 4dry_A 111 RLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT------------ 178 (281)
T ss_dssp CCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC------------
T ss_pred CCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC------------
Confidence 68999999986432 122334568899999988887766432 1 136899999976653
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCC
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPI 222 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (338)
+..+...|+.+|.+.+.+.+.++.+ +|+++++++||.+..+........ ... ....
T Consensus 179 ----------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~--------~~~---~~~~ 237 (281)
T 4dry_A 179 ----------PRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTG--------VLQ---ANGE 237 (281)
T ss_dssp ----------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CE--------EEC---TTSC
T ss_pred ----------CCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcch--------hhh---hhhc
Confidence 1124568999999999999999877 489999999999876542211000 000 0000
Q ss_pred CCCCccccHHHHHHHHHHhhcCCCCCCce
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPNAKGRY 251 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~~~~~~ 251 (338)
.....++..+|+|+++++++..+....+.
T Consensus 238 ~~~~~~~~pedvA~~v~fL~s~~~~~~i~ 266 (281)
T 4dry_A 238 VAAEPTIPIEHIAEAVVYMASLPLSANVL 266 (281)
T ss_dssp EEECCCBCHHHHHHHHHHHHHSCTTEEEE
T ss_pred ccccCCCCHHHHHHHHHHHhCCCccCccc
Confidence 01135789999999999999987665443
No 263
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=99.87 E-value=3.8e-21 Score=169.80 Aligned_cols=217 Identities=16% Similarity=0.122 Sum_probs=153.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEE-cCCCcHHHHHHHhcCCCCCCcEEEEecccCCCC-------------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATV-RDPDNKKKVKHLLELPKASTHLTLWKADLAEEG------------- 69 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~------------- 69 (338)
.+|+||||||+|+||.+++++|+++|++|++++ |+.+........... ....++.++.+|++|.+
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 123 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNA-RRPNSAITVQADLSNVATAPVSGADGSAPV 123 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-HSTTCEEEEECCCSSSCBCC-------CCB
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh-hcCCeEEEEEeeCCCchhcccccccccccc
Confidence 357899999999999999999999999999999 876554443322110 01146899999999998
Q ss_pred ----CchhhhC-------CccEEEEecccCCCCC-------------------CCccchhhhhhhHHHHHHHHHHHhC--
Q 040253 70 ----NFDEPIR-------GCTGVFHLATPMDFES-------------------KDPENEVIRPTINGMVSIMRACKNA-- 117 (338)
Q Consensus 70 ----~~~~~~~-------~~d~vi~~a~~~~~~~-------------------~~~~~~~~~~n~~~~~~l~~~~~~~-- 117 (338)
++.++++ ++|+|||+||...... .+..+..+++|+.++..+++++...
T Consensus 124 ~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~ 203 (328)
T 2qhx_A 124 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 203 (328)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777664 7999999998643211 1223457899999999998876532
Q ss_pred --CC-----ccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEE
Q 040253 118 --KT-----VRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFIS 187 (338)
Q Consensus 118 --~~-----~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i 187 (338)
+. ..+||++||...+. +..+...|+.+|.+.+.+.+.++.++ |+++++
T Consensus 204 ~~~~~~~~~~g~IV~isS~~~~~----------------------~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~ 261 (328)
T 2qhx_A 204 GTPAKHRGTNYSIINMVDAMTNQ----------------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNG 261 (328)
T ss_dssp HSCGGGSCSCEEEEEECCTTTTS----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred hcCCcCCCCCcEEEEECchhhcc----------------------CCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEE
Confidence 10 36899999986653 11244589999999999999998875 899999
Q ss_pred EcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCC-ccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 188 IIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQG-QFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 188 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
++||.+..+. . ... ... ...... ..+ . .+...+|+|+++++++.... ..| .+++.+
T Consensus 262 v~PG~v~T~~-~-~~~-~~~---~~~~~~-~p~-----~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG 321 (328)
T 2qhx_A 262 VGPGLSVLVD-D-MPP-AVW---EGHRSK-VPL-----YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG 321 (328)
T ss_dssp EEESSBSCCC-C-SCH-HHH---HHHHTT-CTT-----TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred EecCcccCCc-c-ccH-HHH---HHHHhh-CCC-----CCCCCCHHHHHHHHHHHhCccccCccCcEEEECC
Confidence 9999998876 2 121 111 111111 111 2 57889999999999996432 234 456644
No 264
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=99.87 E-value=2.3e-21 Score=165.27 Aligned_cols=215 Identities=16% Similarity=0.121 Sum_probs=146.3
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------G 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~ 77 (338)
||++|||||+|+||.+++++|+++|++|++++|+.+.......+... ..++..+ |.+++.++++ +
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~---~~~~~~~-----d~~~v~~~~~~~~~~~g~ 72 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAET---YPQLKPM-----SEQEPAELIEAVTSAYGQ 72 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH---CTTSEEC-----CCCSHHHHHHHHHHHHSC
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc---CCcEEEE-----CHHHHHHHHHHHHHHhCC
Confidence 47899999999999999999999999999999987765554332111 1233333 5565555543 7
Q ss_pred ccEEEEecccC-CCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 78 CTGVFHLATPM-DFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 78 ~d~vi~~a~~~-~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
+|++||+||.. ... ..+..+..+++|+.++.++.+++. +.+ ..++|++||...+.
T Consensus 73 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~-------------- 137 (254)
T 1zmt_A 73 VDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFG-------------- 137 (254)
T ss_dssp CCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTS--------------
T ss_pred CCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCccccc--------------
Confidence 99999999965 211 112345678999999999888764 334 57999999976653
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHH----hhhhcccCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLIT----ALSPITRNEAHY 220 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~----~~~~~~~~~~~~ 220 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.++|+.........+.. ........ ...
T Consensus 138 --------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~-~p~ 208 (254)
T 1zmt_A 138 --------PWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKV-TAL 208 (254)
T ss_dssp --------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHH-SSS
T ss_pred --------CCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhcc-CCC
Confidence 11234589999999999999998875 899999999999887643221111110 00000000 011
Q ss_pred CCCCCCccccHHHHHHHHHHhhcCCCC--CC-ceEEecC
Q 040253 221 PIIKQGQFVHLDDLCSAHIFLFEHPNA--KG-RYICSSH 256 (338)
Q Consensus 221 ~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~-~~~~~~~ 256 (338)
..+.+.+|+|+++++++..... .| .+++.+.
T Consensus 209 -----~~~~~p~dvA~~v~~l~s~~~~~~tG~~~~vdgG 242 (254)
T 1zmt_A 209 -----QRLGTQKELGELVAFLASGSCDYLTGQVFWLAGG 242 (254)
T ss_dssp -----SSCBCHHHHHHHHHHHHTTSCGGGTTCEEEESTT
T ss_pred -----CCCcCHHHHHHHHHHHhCcccCCccCCEEEECCC
Confidence 3578999999999999875432 34 5566443
No 265
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=99.87 E-value=6.1e-21 Score=166.53 Aligned_cols=226 Identities=18% Similarity=0.149 Sum_probs=155.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCC---------cHHHHHHHhc-CCCCCCcEEEEecccCCCCCchh
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPD---------NKKKVKHLLE-LPKASTHLTLWKADLAEEGNFDE 73 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~ 73 (338)
.+|++|||||+|.||.+++++|++.|++|++++|++. ..+.+..... ......++.++.+|++|.+++.+
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 106 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA 106 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 3589999999999999999999999999999998732 1222222111 11112578999999999998887
Q ss_pred hhC-------CccEEEEecccCCCC------CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccC
Q 040253 74 PIR-------GCTGVFHLATPMDFE------SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEE 136 (338)
Q Consensus 74 ~~~-------~~d~vi~~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~ 136 (338)
+++ ++|++||+||..... ..+..+..+++|+.++.++++++... +...++|++||...+.
T Consensus 107 ~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~--- 183 (299)
T 3t7c_A 107 AVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLR--- 183 (299)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTS---
T ss_pred HHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc---
Confidence 764 799999999865422 12234578999999999998876432 2247999999987663
Q ss_pred CCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhc
Q 040253 137 HRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPI 213 (338)
Q Consensus 137 ~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~ 213 (338)
+......|+.+|.+.+.+.+.++.++ |+++++++||.+..+..... .........
T Consensus 184 -------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~ 241 (299)
T 3t7c_A 184 -------------------GAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNE---PTYRMFRPD 241 (299)
T ss_dssp -------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSH---HHHHHHCTT
T ss_pred -------------------CCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCcccccc---chhhhhhhh
Confidence 11234589999999999999999886 89999999999988754321 000000000
Q ss_pred ccCCC---------CCCCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 214 TRNEA---------HYPIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 214 ~~~~~---------~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
..... ...... .++...+|+|+++++++.... . +..+++.+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdG 294 (299)
T 3t7c_A 242 LENPTVEDFQVASRQMHVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDG 294 (299)
T ss_dssp SSSCCHHHHHHHHHHHSSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred hccchhhHHHHHhhhhcccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCC
Confidence 00000 000000 357899999999999997543 2 34566644
No 266
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=99.87 E-value=3.7e-21 Score=165.53 Aligned_cols=223 Identities=16% Similarity=0.123 Sum_probs=154.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc-HHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN-KKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|++|||||+|+||++++++|+++|++|++++|+... .+........ ...++.++.+|++|.+++.++++
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA--LGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH--TTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHh--cCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35899999999999999999999999999998875432 2322221111 12578999999999998887764
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCCCc
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWSD 149 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~ 149 (338)
++|++||+||..... ..+..+..+++|+.++.++.+++...- ...++|++||..... .
T Consensus 95 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~--~------------- 159 (270)
T 3is3_A 95 GHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKD--F------------- 159 (270)
T ss_dssp SCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTT--C-------------
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhcc--C-------------
Confidence 789999999965421 223345678999999999999887653 134999999965221 0
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCC----C---h-hHHHhhhhcccCCC
Q 040253 150 LDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSM----P---P-SLITALSPITRNEA 218 (338)
Q Consensus 150 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~----~---~-~~~~~~~~~~~~~~ 218 (338)
+.++...|+.+|.+.+.+.+.++.++ |+++++++||.+..+...... . . ......... ....
T Consensus 160 ------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 232 (270)
T 3is3_A 160 ------SVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMA-AHAS 232 (270)
T ss_dssp ------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHH-HHHS
T ss_pred ------CCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHH-HhcC
Confidence 11245689999999999999999884 899999999999876421100 0 0 000000000 0001
Q ss_pred CCCCCCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 219 HYPIIKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 219 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
+. .++.+.+|+|+++++++.... ..| .+++.+
T Consensus 233 p~-----~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 267 (270)
T 3is3_A 233 PL-----HRNGWPQDVANVVGFLVSKEGEWVNGKVLTLDG 267 (270)
T ss_dssp TT-----CSCBCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred CC-----CCCCCHHHHHHHHHHHcCCccCCccCcEEEeCC
Confidence 11 458889999999999996543 234 556644
No 267
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=99.87 E-value=6.5e-21 Score=165.58 Aligned_cols=217 Identities=18% Similarity=0.163 Sum_probs=152.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCC-CcHHHHHHHhcCCCCCCcEEEEecccCC----CCCchhhhC--
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDP-DNKKKVKHLLELPKASTHLTLWKADLAE----EGNFDEPIR-- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d----~~~~~~~~~-- 76 (338)
.+|+++||||+|+||.+++++|+++|++|++++|+. +........... ....++.++.+|++| .+++.++++
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~-~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNK-ERSNTAVVCQADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHH-HSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHh-hcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence 358999999999999999999999999999999987 544433222110 011468999999999 776666554
Q ss_pred -----CccEEEEecccCCCCCC---------------CccchhhhhhhHHHHHHHHHHHhCC---C------ccEEEEec
Q 040253 77 -----GCTGVFHLATPMDFESK---------------DPENEVIRPTINGMVSIMRACKNAK---T------VRRLVFTS 127 (338)
Q Consensus 77 -----~~d~vi~~a~~~~~~~~---------------~~~~~~~~~n~~~~~~l~~~~~~~~---~------~~~~v~~S 127 (338)
++|++||+||....... +..+..+++|+.++..+++++...- . ..++|++|
T Consensus 101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~is 180 (288)
T 2x9g_A 101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC 180 (288)
T ss_dssp HHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEEC
T ss_pred HHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEe
Confidence 79999999986542111 1223578899999999988775432 1 35899999
Q ss_pred CceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCCh
Q 040253 128 SAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPP 204 (338)
Q Consensus 128 s~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~ 204 (338)
|...+. +..+...|+.+|.+.+.+.+.++.++ |+++++++||.++++. . . ..
T Consensus 181 S~~~~~----------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~-~~ 235 (288)
T 2x9g_A 181 DAMVDQ----------------------PCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M-GE 235 (288)
T ss_dssp CTTTTS----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S-CH
T ss_pred cccccC----------------------CCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c-Ch
Confidence 987653 11245589999999999999988875 8999999999999886 2 1 11
Q ss_pred hHHHhhhhcccCCCCCCCCCCCcc-ccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 205 SLITALSPITRNEAHYPIIKQGQF-VHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~-i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
... ...... ... ..+ ...+|+|+++++++.... ..| .+++.+
T Consensus 236 ~~~---~~~~~~-~p~-----~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdG 281 (288)
T 2x9g_A 236 EEK---DKWRRK-VPL-----GRREASAEQIADAVIFLVSGSAQYITGSIIKVDG 281 (288)
T ss_dssp HHH---HHHHHT-CTT-----TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred HHH---HHHHhh-CCC-----CCCCCCHHHHHHHHHHHhCccccCccCCEEEECc
Confidence 111 101111 111 245 789999999999997532 234 445543
No 268
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=99.87 E-value=4e-21 Score=163.98 Aligned_cols=219 Identities=14% Similarity=0.090 Sum_probs=154.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEc-CCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVR-DPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
.+|+++||||+|+||.+++++|+++|++|+++.+ +.+.......... ....++.++.+|++|.+++.++++
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQ--SNGGSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHH--HTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHH--hcCCceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 3689999999999999999999999999988755 4433333222111 112578899999999887776653
Q ss_pred -------CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcC
Q 040253 77 -------GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYD 143 (338)
Q Consensus 77 -------~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~ 143 (338)
++|++||+||..... ..+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~---------- 153 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRI---------- 153 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTS----------
T ss_pred cccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhcc----------
Confidence 299999999864421 112234678899999999999987651 146899999987653
Q ss_pred CCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhH-HHhhhhcccCCCC
Q 040253 144 ETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSL-ITALSPITRNEAH 219 (338)
Q Consensus 144 e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~-~~~~~~~~~~~~~ 219 (338)
+.+....|+.+|.+.+.+.+.++.++ |+++++++||.+..+.......... .... .....
T Consensus 154 ------------~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~----~~~~~ 217 (255)
T 3icc_A 154 ------------SLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYA----TTISA 217 (255)
T ss_dssp ------------CCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHH----HHTST
T ss_pred ------------CCCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhh----hccCC
Confidence 11234589999999999999998875 8999999999998775433222111 1111 11111
Q ss_pred CCCCCCCccccHHHHHHHHHHhhcCCC--C-CCceEEec
Q 040253 220 YPIIKQGQFVHLDDLCSAHIFLFEHPN--A-KGRYICSS 255 (338)
Q Consensus 220 ~~~~~~~~~i~v~D~a~~~~~~l~~~~--~-~~~~~~~~ 255 (338)
+ .++.+.+|+|+++.+++.... . +..+++.+
T Consensus 218 ~-----~~~~~~~dva~~~~~l~s~~~~~~tG~~i~vdg 251 (255)
T 3icc_A 218 F-----NRLGEVEDIADTAAFLASPDSRWVTGQLIDVSG 251 (255)
T ss_dssp T-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESS
T ss_pred c-----CCCCCHHHHHHHHHHHhCcccCCccCCEEEecC
Confidence 1 458899999999999986433 2 44566644
No 269
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=99.87 E-value=1.7e-21 Score=166.84 Aligned_cols=211 Identities=18% Similarity=0.166 Sum_probs=148.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+++||||+|+||.+++++|+++|++|++++|+.+............ ..++.++.+|++|.+++.++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK--GVEARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT--TSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--CCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 3589999999999999999999999999999999866544433222111 2468999999999988777664
Q ss_pred CccEEEEecccC-CC-----CCCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 GCTGVFHLATPM-DF-----ESKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 ~~d~vi~~a~~~-~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|+|||+||.. .. ...+..+..+++|+.++.++++++... + ..++|++||...+. .
T Consensus 84 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~---------- 150 (262)
T 1zem_A 84 KIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVK--G---------- 150 (262)
T ss_dssp CCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHS--C----------
T ss_pred CCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcc--C----------
Confidence 799999999864 21 112234567889999999988876543 4 57999999987663 1
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCC------------CChhHHHhhh
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSS------------MPPSLITALS 211 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~------------~~~~~~~~~~ 211 (338)
..+...|+.+|...+.+.+.++.++ |+++++++||.+..+..... ....-.....
T Consensus 151 ----------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (262)
T 1zem_A 151 ----------PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQ 220 (262)
T ss_dssp ----------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHH
T ss_pred ----------CCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHH
Confidence 1134589999999999998888764 89999999998865431100 0000000000
Q ss_pred hcccCCCCCCCCCCCccccHHHHHHHHHHhhcCC
Q 040253 212 PITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHP 245 (338)
Q Consensus 212 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 245 (338)
.... ..+. .++...+|+|+++++++...
T Consensus 221 ~~~~-~~p~-----~r~~~p~dvA~~v~~l~s~~ 248 (262)
T 1zem_A 221 QMIG-SVPM-----RRYGDINEIPGVVAFLLGDD 248 (262)
T ss_dssp HHHH-TSTT-----SSCBCGGGSHHHHHHHHSGG
T ss_pred HHHh-cCCC-----CCCcCHHHHHHHHHHHcCch
Confidence 0000 0111 35788999999999998753
No 270
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=99.86 E-value=3.7e-21 Score=165.46 Aligned_cols=204 Identities=15% Similarity=0.171 Sum_probs=142.9
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------Cc
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-------GC 78 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~ 78 (338)
|++|||||+|+||.+++++|+++|++|++++|+.+............ .++.++.+|++|.+++.++++ ++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 98 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAK---TRVLPLTLDVRDRAAMSAAVDNLPEEFATL 98 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT---SCEEEEECCTTCHHHHHHHHHTCCGGGSSC
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcC---CcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 78999999999999999999999999999999866554443322211 468999999999988877764 46
Q ss_pred cEEEEecccCCC------CCCCccchhhhhhhHHHHHHHHHHH----hCCCcc-EEEEecCceeeeccCCCCCCcCCCCC
Q 040253 79 TGVFHLATPMDF------ESKDPENEVIRPTINGMVSIMRACK----NAKTVR-RLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 79 d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~-~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
|++||+||.... ...+..+..+++|+.++.++.+++. +.+ .. ++|++||...+.
T Consensus 99 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~-------------- 163 (272)
T 2nwq_A 99 RGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKW-------------- 163 (272)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTS--------------
T ss_pred CEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhcc--------------
Confidence 999999986431 1112345678999999888776653 344 46 999999986653
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIK 224 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (338)
+..+...|+.+|...+.+.+.++.+. |+++++++||.+.++........... ... ..+ .
T Consensus 164 --------~~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~-~~~------~~~---~ 225 (272)
T 2nwq_A 164 --------PYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQA-RYD------KTY---A 225 (272)
T ss_dssp --------CCTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC------------------------------
T ss_pred --------CCCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchH-HHH------Hhh---c
Confidence 11234589999999999999988764 89999999999987642211000000 000 000 0
Q ss_pred CCccccHHHHHHHHHHhhcCC
Q 040253 225 QGQFVHLDDLCSAHIFLFEHP 245 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~ 245 (338)
...++..+|+|+++++++..+
T Consensus 226 ~~~~~~pedvA~~v~~l~s~~ 246 (272)
T 2nwq_A 226 GAHPIQPEDIAETIFWIMNQP 246 (272)
T ss_dssp CCCCBCHHHHHHHHHHHHTSC
T ss_pred cCCCCCHHHHHHHHHHHhCCC
Confidence 123578999999999999864
No 271
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=99.86 E-value=1.1e-21 Score=165.96 Aligned_cols=198 Identities=14% Similarity=0.074 Sum_probs=146.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+|+||||+|+||++++++|+++|++|++++|+.+... .....+.+|++|.+++.++++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------~~~~~~~~D~~~~~~v~~~~~~~~~~~~ 73 (241)
T 1dhr_A 6 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------------SASVIVKMTDSFTEQADQVTAEVGKLLG 73 (241)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------------SEEEECCCCSCHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------------CCcEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 3689999999999999999999999999999999875421 245778999999988877664
Q ss_pred --CccEEEEecccCCCCC------CCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 --GCTGVFHLATPMDFES------KDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 --~~d~vi~~a~~~~~~~------~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||...... .+..+..+++|+.++..+.+++...- ...++|++||...+.
T Consensus 74 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~-------------- 139 (241)
T 1dhr_A 74 DQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALD-------------- 139 (241)
T ss_dssp TCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGS--------------
T ss_pred CCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHcc--------------
Confidence 6899999999643211 12234678899999999999886542 135899999987663
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc-----CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN-----NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPI 222 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (338)
+..+...|+.+|.+.+.+.+.++.++ |+++++++||.+-.+.. .... .. ..
T Consensus 140 --------~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~--------~~~~----~~-~~--- 195 (241)
T 1dhr_A 140 --------GTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMN--------RKSM----PE-AD--- 195 (241)
T ss_dssp --------CCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHH--------HHHS----TT-SC---
T ss_pred --------CCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccc--------cccC----cc-hh---
Confidence 11244589999999999999988764 59999999998865421 0000 00 00
Q ss_pred CCCCccccHHHHHHHHHHhhcCCCC--CC-ceEE
Q 040253 223 IKQGQFVHLDDLCSAHIFLFEHPNA--KG-RYIC 253 (338)
Q Consensus 223 ~~~~~~i~v~D~a~~~~~~l~~~~~--~~-~~~~ 253 (338)
...++..+|+|++++.++..... .| .+.+
T Consensus 196 --~~~~~~~~~vA~~v~~l~~~~~~~~~G~~~~v 227 (241)
T 1dhr_A 196 --FSSWTPLEFLVETFHDWITGNKRPNSGSLIQV 227 (241)
T ss_dssp --GGGSEEHHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred --hccCCCHHHHHHHHHHHhcCCCcCccceEEEE
Confidence 12467889999999999875432 34 4555
No 272
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=99.86 E-value=7.2e-22 Score=171.48 Aligned_cols=201 Identities=15% Similarity=0.028 Sum_probs=145.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+++||||||+|+||++++++|+++|++|++++|+.+............ ...++.++.+|++|.+++.++++
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g 105 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL-GAASAHYIAGTMEDMTFAEQFVAQAGKLMG 105 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-TCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-CCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 3579999999999999999999999999999999876544433211100 11368999999999988877664
Q ss_pred CccEEEEe-cccCCCC----CCCccchhhhhhhHHHHHHHHHHHhC---CCccEEEEecCceeeeccCCCCCCcCCCCCC
Q 040253 77 GCTGVFHL-ATPMDFE----SKDPENEVIRPTINGMVSIMRACKNA---KTVRRLVFTSSAGTLDVEEHRKPVYDETSWS 148 (338)
Q Consensus 77 ~~d~vi~~-a~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~ 148 (338)
++|+|||+ |+..... ..+.....+++|+.++.++++++... + ..++|++||...+.
T Consensus 106 ~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~g~iv~isS~~~~~--------------- 169 (286)
T 1xu9_A 106 GLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS-NGSIVVVSSLAGKV--------------- 169 (286)
T ss_dssp SCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH-TCEEEEEEEGGGTS---------------
T ss_pred CCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC-CCEEEEECCccccc---------------
Confidence 79999999 4543221 11223467899999999998877543 2 36999999987653
Q ss_pred chhhhhhccCCCchHHHHHHHHHHHHHHHHHHc-----CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 149 DLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN-----NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 149 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-----~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+.++...|+.+|...+.+++.++.++ ++++++++||.+..+.. .... .+.
T Consensus 170 -------~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~--------~~~~---~~~------- 224 (286)
T 1xu9_A 170 -------AYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA--------MKAV---SGI------- 224 (286)
T ss_dssp -------CCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH--------HHHS---CGG-------
T ss_pred -------CCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH--------HHhc---ccc-------
Confidence 11245689999999999998888765 89999999998865421 0000 010
Q ss_pred CCCccccHHHHHHHHHHhhcCCC
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~ 246 (338)
.....++.+|+|+.++.+++.+.
T Consensus 225 ~~~~~~~~~~vA~~i~~~~~~~~ 247 (286)
T 1xu9_A 225 VHMQAAPKEECALEIIKGGALRQ 247 (286)
T ss_dssp GGGGCBCHHHHHHHHHHHHHTTC
T ss_pred ccCCCCCHHHHHHHHHHHHhcCC
Confidence 11357899999999999998753
No 273
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=99.85 E-value=9.1e-21 Score=162.89 Aligned_cols=219 Identities=19% Similarity=0.151 Sum_probs=155.5
Q ss_pred CCcEEEEeCCc--hhhHHHHHHHHHHCCCeEEEEEcCCCcH--HHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC---
Q 040253 4 IAETVCVTGAS--GFIGSWLIMRLLERGYAVRATVRDPDNK--KKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--- 76 (338)
Q Consensus 4 ~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 76 (338)
.+|+|+||||+ |+||.+++++|+++|++|++++|+.... +..+.+.... ..++.++.+|++|.+++.++++
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~ 96 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTY--GIKAKAYKCQVDSYESCEKLVKDVV 96 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHH--CCCEECCBCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhc--CCceeEEecCCCCHHHHHHHHHHHH
Confidence 46899999999 9999999999999999999999876653 2223222111 1578999999999998877664
Q ss_pred ----CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcC
Q 040253 77 ----GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYD 143 (338)
Q Consensus 77 ----~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~ 143 (338)
++|++||+||..... ..+..+..+++|+.++.++++++ ++.+ ..++|++||...+. ..
T Consensus 97 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~--~~------ 167 (267)
T 3gdg_A 97 ADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHI--AN------ 167 (267)
T ss_dssp HHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTS--CC------
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccc--cC------
Confidence 689999999865422 12234568899999999998887 3344 56999999976653 10
Q ss_pred CCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHcC--ccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCC
Q 040253 144 ETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENN--IDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYP 221 (338)
Q Consensus 144 e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~--~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (338)
...+...|+.+|.+.+.+++.++.+++ ++++++.||.+..+.... ......... ......
T Consensus 168 ------------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~-~~~~~~~~~----~~~~~~- 229 (267)
T 3gdg_A 168 ------------FPQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDF-VPKETQQLW----HSMIPM- 229 (267)
T ss_dssp ------------SSSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGG-SCHHHHHHH----HTTSTT-
T ss_pred ------------CCCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhh-CCHHHHHHH----HhcCCC-
Confidence 112456899999999999999998874 789999999997654321 111111111 111111
Q ss_pred CCCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 222 IIKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 222 ~~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
.++.+.+|+|+++++++.... ..| .+++.+
T Consensus 230 ----~r~~~~~dva~~~~~l~s~~~~~itG~~i~vdg 262 (267)
T 3gdg_A 230 ----GRDGLAKELKGAYVYFASDASTYTTGADLLIDG 262 (267)
T ss_dssp ----SSCEETHHHHHHHHHHHSTTCTTCCSCEEEEST
T ss_pred ----CCCcCHHHHHhHhheeecCccccccCCEEEECC
Confidence 468899999999999997533 234 556643
No 274
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=99.85 E-value=1.5e-20 Score=157.86 Aligned_cols=208 Identities=15% Similarity=0.140 Sum_probs=150.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
|.|+||||||++-||.+++++|++.|++|.+.+|+.+....... . .+++..+.+|++|++++.++++
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~---~---~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g 74 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK---E---RPNLFYFHGDVADPLTLKKFVEYAMEKLQ 74 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT---T---CTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---h---cCCEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35899999999999999999999999999999998654443322 1 2578999999999998877653
Q ss_pred CccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHHhC--CCccEEEEecCceeeeccCCCCCCcCCCCCCc
Q 040253 77 GCTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACKNA--KTVRRLVFTSSAGTLDVEEHRKPVYDETSWSD 149 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~~~--~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~ 149 (338)
++|++||+||.... ...+.++..+++|+.++..+.+++... ....++|++||...+. .
T Consensus 75 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~--~------------- 139 (247)
T 3ged_A 75 RIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQ--S------------- 139 (247)
T ss_dssp CCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTS--C-------------
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccccc--C-------------
Confidence 79999999985431 223345678999999998888766432 1136899999976552 1
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHHHHHHHc--CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCc
Q 040253 150 LDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN--NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQ 227 (338)
Q Consensus 150 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (338)
.+....|+.+|.....+.+.++.++ ++++..+-||.+--+.... .. .... . ..+. .+
T Consensus 140 -------~~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~-~~---~~~~----~-~~Pl-----~R 198 (247)
T 3ged_A 140 -------EPDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQE-FT---QEDC----A-AIPA-----GK 198 (247)
T ss_dssp -------CTTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC----CC---HHHH----H-TSTT-----SS
T ss_pred -------CCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHH-HH---HHHH----h-cCCC-----CC
Confidence 1124589999999999999998886 7999999999885443211 11 1111 1 1111 45
Q ss_pred cccHHHHHHHHHHhhcCCCCCCc-eEE
Q 040253 228 FVHLDDLCSAHIFLFEHPNAKGR-YIC 253 (338)
Q Consensus 228 ~i~v~D~a~~~~~~l~~~~~~~~-~~~ 253 (338)
+...+|+|+++++++...-..|. +.+
T Consensus 199 ~g~pediA~~v~fL~s~~~iTG~~i~V 225 (247)
T 3ged_A 199 VGTPKDISNMVLFLCQQDFITGETIIV 225 (247)
T ss_dssp CBCHHHHHHHHHHHHHCSSCCSCEEEE
T ss_pred CcCHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 78899999999999975444443 444
No 275
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=99.85 E-value=1.8e-20 Score=158.00 Aligned_cols=215 Identities=19% Similarity=0.130 Sum_probs=153.8
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
|+-.+|+++||||++-||.++++.|++.|.+|.+.+|+.+..++....... ...++..+.+|++|++++.++++
T Consensus 3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~--~g~~~~~~~~Dvt~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRG--MGKEVLGVKADVSKKKDVEEFVRRTFE 80 (254)
T ss_dssp GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--TTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHh--cCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence 344579999999999999999999999999999999987765554433221 12578999999999998887663
Q ss_pred ---CccEEEEecccCCC------CCCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcC
Q 040253 77 ---GCTGVFHLATPMDF------ESKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYD 143 (338)
Q Consensus 77 ---~~d~vi~~a~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~ 143 (338)
++|++||+||.... ...+.++..+++|+.++..+.+++. +.+ ..++|++||.....
T Consensus 81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~---------- 149 (254)
T 4fn4_A 81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIR---------- 149 (254)
T ss_dssp HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTC----------
T ss_pred HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcC----------
Confidence 79999999985431 1223456789999999988877653 334 57999999976542
Q ss_pred CCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCC
Q 040253 144 ETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHY 220 (338)
Q Consensus 144 e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (338)
+.+....|+.+|.....+.+.++.++ |+++..|-||.+-.+.........-...... .....+.
T Consensus 150 ------------~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~-~~~~~~~ 216 (254)
T 4fn4_A 150 ------------GGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTL-TKLMSLS 216 (254)
T ss_dssp ------------SSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHH-HHHHTTC
T ss_pred ------------CCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHH-HhcCCCC
Confidence 11234589999999999999998885 8999999999997664322211111100000 0110111
Q ss_pred CCCCCCccccHHHHHHHHHHhhcCCC
Q 040253 221 PIIKQGQFVHLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 221 ~~~~~~~~i~v~D~a~~~~~~l~~~~ 246 (338)
.++...+|+|.++++++....
T Consensus 217 -----~R~g~pediA~~v~fLaSd~a 237 (254)
T 4fn4_A 217 -----SRLAEPEDIANVIVFLASDEA 237 (254)
T ss_dssp -----CCCBCHHHHHHHHHHHHSGGG
T ss_pred -----CCCcCHHHHHHHHHHHhCchh
Confidence 357789999999999986543
No 276
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=99.85 E-value=1.9e-20 Score=161.32 Aligned_cols=205 Identities=15% Similarity=0.113 Sum_probs=147.2
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc-------HHHHHHHhcCCCCCCcEEEEecccCCCCCchh
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN-------KKKVKHLLELPKASTHLTLWKADLAEEGNFDE 73 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 73 (338)
|...+|+++||||+|.||.+++++|+++|++|++++|+.+. ......... ....++.++.+|++|.+++.+
T Consensus 2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~Dv~~~~~v~~ 79 (274)
T 3e03_A 2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVN--AAGGQGLALKCDIREEDQVRA 79 (274)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHH--HHTSEEEEEECCTTCHHHHHH
T ss_pred CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHH--hcCCeEEEEeCCCCCHHHHHH
Confidence 55668999999999999999999999999999999998753 121111110 012578999999999998877
Q ss_pred hhC-------CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHh----CCCccEEEEecCceeeeccCC
Q 040253 74 PIR-------GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKN----AKTVRRLVFTSSAGTLDVEEH 137 (338)
Q Consensus 74 ~~~-------~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~----~~~~~~~v~~Ss~~v~~~~~~ 137 (338)
+++ ++|++||+||..... ..+..+..+++|+.++..+.+++.. .+ ..++|++||...+...
T Consensus 80 ~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~-- 156 (274)
T 3e03_A 80 AVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPA-- 156 (274)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHH--
T ss_pred HHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCC--
Confidence 664 799999999864321 1223356788999999999887643 33 5799999998765310
Q ss_pred CCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcc
Q 040253 138 RKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPIT 214 (338)
Q Consensus 138 ~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~ 214 (338)
...+...|+.+|.+.+.+.+.++.++ |++++++.||.+...... . .. .
T Consensus 157 ------------------~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~----~----~~---~ 207 (274)
T 3e03_A 157 ------------------WWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAI----N----ML---P 207 (274)
T ss_dssp ------------------HHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC------------------
T ss_pred ------------------CCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchh----h----hc---c
Confidence 01234589999999999999998875 899999999854332211 0 00 0
Q ss_pred cCCCCCCCCCCCccccHHHHHHHHHHhhcCCC
Q 040253 215 RNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 215 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 246 (338)
.. ....+...+|+|++++.++....
T Consensus 208 ~~-------~~~~~~~pedvA~~v~~l~s~~~ 232 (274)
T 3e03_A 208 GV-------DAAACRRPEIMADAAHAVLTREA 232 (274)
T ss_dssp CC-------CGGGSBCTHHHHHHHHHHHTSCC
T ss_pred cc-------cccccCCHHHHHHHHHHHhCccc
Confidence 00 01247789999999999997644
No 277
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=99.85 E-value=1.8e-20 Score=160.39 Aligned_cols=212 Identities=19% Similarity=0.148 Sum_probs=142.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh--------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI-------- 75 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------- 75 (338)
.+|++|||||+|+||.+++++|+++|++|++++|+.+........... ...++.++.+|++|.+++.+++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQS--LGGQCVPVVCDSSQESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH--HSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH--cCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 468999999999999999999999999999999986554433221110 0147889999999998876654
Q ss_pred CCccEEEEecc--cC--------C--CCCCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCC
Q 040253 76 RGCTGVFHLAT--PM--------D--FESKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRK 139 (338)
Q Consensus 76 ~~~d~vi~~a~--~~--------~--~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~ 139 (338)
.++|++||+|| .. . ....+..+..+++|+.++..+.+++. +.+ ..++|++||...+. .
T Consensus 82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~--~--- 155 (260)
T 2qq5_A 82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQ--Y--- 155 (260)
T ss_dssp TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTS--C---
T ss_pred CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcC--C---
Confidence 35799999994 21 1 11223345677889888877766553 444 57999999986652 0
Q ss_pred CCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccC
Q 040253 140 PVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRN 216 (338)
Q Consensus 140 ~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~ 216 (338)
.+...|+.+|...+.+.+.++.+ +|+++++++||.+..+............ .......
T Consensus 156 ------------------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~ 216 (260)
T 2qq5_A 156 ------------------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVL-QDPVLKQ 216 (260)
T ss_dssp ------------------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC------------------
T ss_pred ------------------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhcccccc-chhHHHH
Confidence 13458999999999999998876 3899999999999876432111000000 0000000
Q ss_pred CCCCCCCCCCccccHHHHHHHHHHhhcCCC
Q 040253 217 EAHYPIIKQGQFVHLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 217 ~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 246 (338)
... ....+...+|+|+++++++....
T Consensus 217 ---~~~-~~~~~~~pe~va~~v~~l~s~~~ 242 (260)
T 2qq5_A 217 ---FKS-AFSSAETTELSGKCVVALATDPN 242 (260)
T ss_dssp ---------CHHHHHHHHHHHHHHHHTCTT
T ss_pred ---HHh-hhccCCCHHHHHHHHHHHhcCcc
Confidence 000 00235689999999999997653
No 278
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=99.85 E-value=4.1e-20 Score=160.69 Aligned_cols=217 Identities=17% Similarity=0.150 Sum_probs=152.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEE-cCCCcHHHHHHHhcCCCCCCcEEEEecccCCCC-------------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATV-RDPDNKKKVKHLLELPKASTHLTLWKADLAEEG------------- 69 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~------------- 69 (338)
.+|++|||||+|+||.+++++|+++|++|++++ |+.+........... ....++.++.+|++|.+
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNA-RRPNSAITVQADLSNVATAPVSGADGSAPV 86 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHH-HSTTCEEEEECCCSSSCBCCCC----CCCB
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhh-hcCCeeEEEEeecCCccccccccccccccc
Confidence 458999999999999999999999999999999 876554433222110 01147899999999998
Q ss_pred ----CchhhhC-------CccEEEEecccCCCCC-------------------CCccchhhhhhhHHHHHHHHHHHhC--
Q 040253 70 ----NFDEPIR-------GCTGVFHLATPMDFES-------------------KDPENEVIRPTINGMVSIMRACKNA-- 117 (338)
Q Consensus 70 ----~~~~~~~-------~~d~vi~~a~~~~~~~-------------------~~~~~~~~~~n~~~~~~l~~~~~~~-- 117 (338)
++.++++ ++|++||+||...... .+..+..+++|+.++..+++++...
T Consensus 87 ~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 166 (291)
T 1e7w_A 87 TLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVA 166 (291)
T ss_dssp CHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 7777664 7999999998643211 1223467889999999998877532
Q ss_pred -CC------ccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEE
Q 040253 118 -KT------VRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFIS 187 (338)
Q Consensus 118 -~~------~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i 187 (338)
.. ..++|++||...+. +......|+.+|...+.+.+.++.++ |+++++
T Consensus 167 ~~~~~~~~~~g~Iv~isS~~~~~----------------------~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~ 224 (291)
T 1e7w_A 167 GTPAKHRGTNYSIINMVDAMTNQ----------------------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNG 224 (291)
T ss_dssp TSCGGGSCSCEEEEEECCTTTTS----------------------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred hcCCCCCCCCcEEEEEechhhcC----------------------CCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEE
Confidence 11 36899999986653 11234589999999999999988874 899999
Q ss_pred EcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCC-ccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 188 IIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQG-QFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 188 lRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
++||.+..+. . ........ ... .... . .+...+|+|+++++++.... ..| .+++.+
T Consensus 225 v~PG~v~T~~-~--~~~~~~~~---~~~-~~p~-----~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdG 284 (291)
T 1e7w_A 225 VGPGLSVLVD-D--MPPAVWEG---HRS-KVPL-----YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDG 284 (291)
T ss_dssp EEESSBCCGG-G--SCHHHHHH---HHT-TCTT-----TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred EeeCCccCCc-c--CCHHHHHH---HHh-hCCC-----CCCCCCHHHHHHHHHHHhCCcccCccCcEEEECC
Confidence 9999987654 2 21111111 111 1111 2 57889999999999996432 244 445543
No 279
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=99.84 E-value=1.5e-20 Score=159.59 Aligned_cols=200 Identities=20% Similarity=0.160 Sum_probs=144.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEeccc--CCCCCchhhhC-----
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADL--AEEGNFDEPIR----- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl--~d~~~~~~~~~----- 76 (338)
.+|+++||||+|+||++++++|+++|++|++++|+............... .++..++.+|+ +|.+++.++++
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG-QPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-SCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC-CCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 35899999999999999999999999999999998766555433222111 14566777777 77777766553
Q ss_pred --CccEEEEecccCCCC------CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCC
Q 040253 77 --GCTGVFHLATPMDFE------SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDE 144 (338)
Q Consensus 77 --~~d~vi~~a~~~~~~------~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e 144 (338)
++|++||+||..... ..+..+..+++|+.++.++++++ ++.+ ..++|++||...+.
T Consensus 92 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~----------- 159 (247)
T 3i1j_A 92 FGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRK----------- 159 (247)
T ss_dssp HSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTS-----------
T ss_pred CCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcC-----------
Confidence 799999999964311 12334567899999999999887 3444 57999999976553
Q ss_pred CCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc----CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCC
Q 040253 145 TSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN----NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHY 220 (338)
Q Consensus 145 ~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~----~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (338)
+..+...|+.+|.+.+.+.+.++.++ +++++++.||.+..+. ..... ...
T Consensus 160 -----------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~--------~~~~~----~~~--- 213 (247)
T 3i1j_A 160 -----------GRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM--------RAQAY----PDE--- 213 (247)
T ss_dssp -----------CCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH--------HHHHS----TTS---
T ss_pred -----------CCCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc--------chhcc----ccc---
Confidence 11245589999999999999998874 7899999998875432 01000 000
Q ss_pred CCCCCCccccHHHHHHHHHHhhcCC
Q 040253 221 PIIKQGQFVHLDDLCSAHIFLFEHP 245 (338)
Q Consensus 221 ~~~~~~~~i~v~D~a~~~~~~l~~~ 245 (338)
....+...+|+++++++++...
T Consensus 214 ---~~~~~~~p~dva~~~~~l~s~~ 235 (247)
T 3i1j_A 214 ---NPLNNPAPEDIMPVYLYLMGPD 235 (247)
T ss_dssp ---CGGGSCCGGGGTHHHHHHHSGG
T ss_pred ---CccCCCCHHHHHHHHHHHhCch
Confidence 0134677999999999998653
No 280
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=99.84 E-value=7.1e-20 Score=162.46 Aligned_cols=208 Identities=16% Similarity=0.208 Sum_probs=150.1
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcH-------HH-HHHHhcCCCCCCcEEEEecccCCCCCchhhhC
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNK-------KK-VKHLLELPKASTHLTLWKADLAEEGNFDEPIR 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 76 (338)
+|+||||||+|.||.+++++|+++|++|++++|+.+.. .. .+.+... ..++.++.+|++|.+++.++++
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~---g~~~~~~~~Dv~d~~~v~~~~~ 121 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV---GGKALPCIVDVRDEQQISAAVE 121 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc---CCeEEEEEccCCCHHHHHHHHH
Confidence 57899999999999999999999999999999987642 11 1222211 2578999999999998887764
Q ss_pred -------CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCC
Q 040253 77 -------GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKP 140 (338)
Q Consensus 77 -------~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~ 140 (338)
++|+|||+||..... ..+..+..+++|+.++.++++++. +.+ ..++|++||...+...
T Consensus 122 ~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~~~~----- 195 (346)
T 3kvo_A 122 KAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPV----- 195 (346)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCCCGG-----
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHcCCC-----
Confidence 799999999964421 112335678999999999999874 334 5799999998766310
Q ss_pred CcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc--CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCC
Q 040253 141 VYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN--NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEA 218 (338)
Q Consensus 141 ~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 218 (338)
...+...|+.+|...+.+.+.++.++ +++++++.||.++... ... .. .+. .
T Consensus 196 ---------------~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~-------~~~-~~---~~~-~ 248 (346)
T 3kvo_A 196 ---------------WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA-------AMD-ML---GGP-G 248 (346)
T ss_dssp ---------------GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH-------HHH-HH---CC---
T ss_pred ---------------CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH-------HHH-hh---ccc-c
Confidence 01245689999999999999999886 7999999998643221 111 11 111 1
Q ss_pred CCCCCCCCccccHHHHHHHHHHhhcCCC-CCCceEE
Q 040253 219 HYPIIKQGQFVHLDDLCSAHIFLFEHPN-AKGRYIC 253 (338)
Q Consensus 219 ~~~~~~~~~~i~v~D~a~~~~~~l~~~~-~~~~~~~ 253 (338)
. ...+...+|+|++++.++.... ..|.+++
T Consensus 249 ~-----~~r~~~pedvA~~v~~L~s~~~~itG~~iv 279 (346)
T 3kvo_A 249 I-----ESQCRKVDIIADAAYSIFQKPKSFTGNFVI 279 (346)
T ss_dssp C-----GGGCBCTHHHHHHHHHHHTSCTTCCSCEEE
T ss_pred c-----cccCCCHHHHHHHHHHHHhcCCCCCceEEE
Confidence 1 1357789999999999998722 2454444
No 281
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=99.84 E-value=9.1e-20 Score=160.04 Aligned_cols=215 Identities=15% Similarity=0.113 Sum_probs=145.8
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCC-CCchhhhC-------
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEE-GNFDEPIR------- 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~------- 76 (338)
+++||||||+|+||.+++++|+++|++|++++|+.............. ...++.++.+|++|. +.+.++++
T Consensus 12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g 90 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS-NHENVVFHQLDVTDPIATMSSLADFIKTHFG 90 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT-TCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence 578999999999999999999999999999999876644433222211 124799999999998 76665543
Q ss_pred CccEEEEecccCCCC-----------------------------------CCCccchhhhhhhHHHHHHHHHHH----hC
Q 040253 77 GCTGVFHLATPMDFE-----------------------------------SKDPENEVIRPTINGMVSIMRACK----NA 117 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~-----------------------------------~~~~~~~~~~~n~~~~~~l~~~~~----~~ 117 (338)
++|+|||+||..... ..+..+..+++|+.++..+++++. +.
T Consensus 91 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~ 170 (311)
T 3o26_A 91 KLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLS 170 (311)
T ss_dssp SCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred CCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccC
Confidence 799999999965310 111223568999999988888764 33
Q ss_pred CCccEEEEecCceeeeccCCCC----CCcCCCCCCchhh-----------------hhhccCCCchHHHHHHHHHHHHHH
Q 040253 118 KTVRRLVFTSSAGTLDVEEHRK----PVYDETSWSDLDF-----------------VRSVKMTGWMYFVSKTLAEQAAWK 176 (338)
Q Consensus 118 ~~~~~~v~~Ss~~v~~~~~~~~----~~~~e~~~~~~~~-----------------~~~~~~p~~~Y~~sK~~~E~~~~~ 176 (338)
+ ..++|++||...+....... ...++..+..... ....+.+...|+.||.+.+.+.+.
T Consensus 171 ~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~ 249 (311)
T 3o26_A 171 D-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRV 249 (311)
T ss_dssp S-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHH
T ss_pred C-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHH
Confidence 3 57999999986653111000 0000000000000 000112456899999999999999
Q ss_pred HHHHc-CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCC
Q 040253 177 FAEEN-NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 177 ~~~~~-~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~ 246 (338)
+++++ +++++++.||.|..+.... ......++.++.++.++..+.
T Consensus 250 la~e~~~i~v~~v~PG~v~T~~~~~-------------------------~~~~~~~~~a~~~~~~~~~~~ 295 (311)
T 3o26_A 250 LANKIPKFQVNCVCPGLVKTEMNYG-------------------------IGNYTAEEGAEHVVRIALFPD 295 (311)
T ss_dssp HHHHCTTSEEEEECCCSBCSGGGTT-------------------------CCSBCHHHHHHHHHHHHTCCS
T ss_pred HHhhcCCceEEEecCCceecCCcCC-------------------------CCCCCHHHHHHHHHHHHhCCC
Confidence 99987 7999999999886543110 123578889999988876543
No 282
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=99.84 E-value=6.4e-20 Score=152.98 Aligned_cols=214 Identities=16% Similarity=0.100 Sum_probs=151.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC---CccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---GCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---~~d~ 80 (338)
.+|+++||||++-||..++++|++.|++|.+.+|+.+.... ....++..+.+|++|++++.++++ ++|+
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~--------~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi 81 (242)
T 4b79_A 10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA--------PRHPRIRREELDITDSQRLQRLFEALPRLDV 81 (242)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS--------CCCTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh--------hhcCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 47999999999999999999999999999999998765332 112578999999999998888765 7999
Q ss_pred EEEecccCCC---CCCCccchhhhhhhHHHHHHHHHHHhCC--CccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhh
Q 040253 81 VFHLATPMDF---ESKDPENEVIRPTINGMVSIMRACKNAK--TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRS 155 (338)
Q Consensus 81 vi~~a~~~~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~ 155 (338)
+||+||.... ...+.++..+++|+.++..+.+++...- +..++|++||.....
T Consensus 82 LVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~---------------------- 139 (242)
T 4b79_A 82 LVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTF---------------------- 139 (242)
T ss_dssp EEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTS----------------------
T ss_pred EEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccC----------------------
Confidence 9999986431 1223456788999999988877664321 126899999976542
Q ss_pred ccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHH
Q 040253 156 VKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLD 232 (338)
Q Consensus 156 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 232 (338)
+.+....|+.||.....+.+.++.++ |+++..|-||.+..|......... .. ....... .++ .++...+
T Consensus 140 ~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~-~~-~~~~~~~-~Pl-----gR~g~pe 211 (242)
T 4b79_A 140 GSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADV-EA-TRRIMQR-TPL-----ARWGEAP 211 (242)
T ss_dssp CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCH-HH-HHHHHHT-CTT-----CSCBCHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCH-HH-HHHHHhc-CCC-----CCCcCHH
Confidence 11134589999999999999998875 899999999999766432211111 00 1111111 122 4588899
Q ss_pred HHHHHHHHhhcCCCC--CC-ceEEec
Q 040253 233 DLCSAHIFLFEHPNA--KG-RYICSS 255 (338)
Q Consensus 233 D~a~~~~~~l~~~~~--~~-~~~~~~ 255 (338)
|+|.++++++..... .| .+.+.+
T Consensus 212 eiA~~v~fLaSd~a~~iTG~~l~VDG 237 (242)
T 4b79_A 212 EVASAAAFLCGPGASFVTGAVLAVDG 237 (242)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred HHHHHHHHHhCchhcCccCceEEECc
Confidence 999999999865432 33 445543
No 283
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=99.83 E-value=2.3e-19 Score=151.96 Aligned_cols=223 Identities=17% Similarity=0.179 Sum_probs=154.4
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC------
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------ 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------ 76 (338)
-.+|+++||||++-||.++++.|++.|.+|.+.+|+.+.....+.+... ..++..+.+|++|++++.++++
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~v~~~~~~~ 81 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQR---QPRATYLPVELQDDAQCRDAVAQTIATF 81 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhc---CCCEEEEEeecCCHHHHHHHHHHHHHHh
Confidence 3579999999999999999999999999999999988775554443322 2578999999999988877653
Q ss_pred -CccEEEEecccCCC----CCCCccchhhhhhhHHHHHHHHHHHhCC--CccEEEEecCceeeeccCCCCCCcCCCCCCc
Q 040253 77 -GCTGVFHLATPMDF----ESKDPENEVIRPTINGMVSIMRACKNAK--TVRRLVFTSSAGTLDVEEHRKPVYDETSWSD 149 (338)
Q Consensus 77 -~~d~vi~~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~ 149 (338)
++|++||+||.... ...+.++..+++|+.++..+.+++..+- ...++|++||.....
T Consensus 82 G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~---------------- 145 (258)
T 4gkb_A 82 GRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVT---------------- 145 (258)
T ss_dssp SCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHH----------------
T ss_pred CCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhcc----------------
Confidence 79999999985431 1223355678899999988877664220 126899999986653
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChh--HHHhhhhcccCCCCCCCCC
Q 040253 150 LDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPS--LITALSPITRNEAHYPIIK 224 (338)
Q Consensus 150 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 224 (338)
+.+....|+.+|.....+.+.++.++ ||++..|-||.+-.+......... ............ ++ +
T Consensus 146 ------~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~-pl--g- 215 (258)
T 4gkb_A 146 ------GQGNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKV-PL--G- 215 (258)
T ss_dssp ------CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTC-TT--T-
T ss_pred ------CCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcC-CC--C-
Confidence 11234589999999999999999875 899999999999766432211000 000000000111 11 1
Q ss_pred CCccccHHHHHHHHHHhhcCCCC--CC-ceEEec
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPNA--KG-RYICSS 255 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~~--~~-~~~~~~ 255 (338)
.++...+|+|.++++++..... .| .+.+.+
T Consensus 216 -~R~g~peeiA~~v~fLaS~~a~~iTG~~i~VDG 248 (258)
T 4gkb_A 216 -RRFTTPDEIADTAVFLLSPRASHTTGEWLFVDG 248 (258)
T ss_dssp -TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -CCCcCHHHHHHHHHHHhCchhcCccCCeEEECC
Confidence 3678899999999999864332 34 455533
No 284
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=99.83 E-value=3.3e-20 Score=156.50 Aligned_cols=219 Identities=14% Similarity=0.074 Sum_probs=154.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|+++||||++-||..+++.|++.|++|.+.+|+.+...+....... ...++..+.+|++|++++.++++
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~--~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTR--KGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHH--TTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHh--cCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 479999999999999999999999999999999987655444332211 12578999999999998877663
Q ss_pred CccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 GCTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|++||+||.... ...+.++..+++|+.++..+.+++. +.+...++|++||.....
T Consensus 86 ~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~-------------- 151 (255)
T 4g81_D 86 HVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA-------------- 151 (255)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS--------------
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcC--------------
Confidence 69999999986442 2234456789999999988877653 222246999999976553
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCC-ChhHHHhhhhcccCCCCCCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSM-PPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 223 (338)
+.+....|+.+|.....+.+.++.++ |+++..|-||.+..+...... ........ ....+.
T Consensus 152 --------~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~----~~~~Pl--- 216 (255)
T 4g81_D 152 --------ARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWV----KSSTPS--- 216 (255)
T ss_dssp --------BCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHH----HHHSTT---
T ss_pred --------CCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHH----HhCCCC---
Confidence 11134589999999999999998875 899999999998755321100 00111111 011111
Q ss_pred CCCccccHHHHHHHHHHhhcCCCC--CC-ceEEec
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPNA--KG-RYICSS 255 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~~--~~-~~~~~~ 255 (338)
.++...+|+|.++++++..... .| .+.+.+
T Consensus 217 --~R~g~pediA~~v~fL~S~~a~~iTG~~i~VDG 249 (255)
T 4g81_D 217 --QRWGRPEELIGTAIFLSSKASDYINGQIIYVDG 249 (255)
T ss_dssp --CSCBCGGGGHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred --CCCcCHHHHHHHHHHHhCchhCCCcCCEEEECC
Confidence 4578899999999999864332 33 455544
No 285
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=99.82 E-value=3.1e-21 Score=170.29 Aligned_cols=174 Identities=13% Similarity=0.093 Sum_probs=126.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC-------eEEEEEcCCC--cHHH-HHHHhcCCCCCCcEEEEecccCCCCCchhh
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY-------AVRATVRDPD--NKKK-VKHLLELPKASTHLTLWKADLAEEGNFDEP 74 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 74 (338)
+|||+||||+||||++++..|+++|+ +|.++++.+. .... ...+.. ..+.++ +|+.+.+++.++
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~-----~~~~~~-~di~~~~~~~~a 77 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED-----CAFPLL-AGLEATDDPKVA 77 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT-----TTCTTE-EEEEEESCHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc-----cccccc-CCeEeccChHHH
Confidence 47999999999999999999999886 8988887542 1111 112211 111223 578777788888
Q ss_pred hCCccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcC-CCCCCchhh
Q 040253 75 IRGCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYD-ETSWSDLDF 152 (338)
Q Consensus 75 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~-e~~~~~~~~ 152 (338)
++++|+|||+||...... ....++++.|+.++.++++++++.+ ...+++++|+..... .+.. |..
T Consensus 78 ~~~~D~Vih~Ag~~~~~~-~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~------~~~~~~~~------ 144 (327)
T 1y7t_A 78 FKDADYALLVGAAPRKAG-MERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTN------ALIAYKNA------ 144 (327)
T ss_dssp TTTCSEEEECCCCCCCTT-CCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHH------HHHHHHTC------
T ss_pred hCCCCEEEECCCcCCCCC-CCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhh------HHHHHHHc------
Confidence 999999999999765433 3345789999999999999999874 345788888753100 0111 111
Q ss_pred hhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCC
Q 040253 153 VRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLT 199 (338)
Q Consensus 153 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~ 199 (338)
+..+|.+.|+.+|+.+|++...+++.+|++.+++|++++|||+..
T Consensus 145 --~~~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~~ 189 (327)
T 1y7t_A 145 --PGLNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHSS 189 (327)
T ss_dssp --TTSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSST
T ss_pred --CCCChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCCC
Confidence 012356689999999999999999989999999999999998754
No 286
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=99.82 E-value=6e-20 Score=170.05 Aligned_cols=221 Identities=15% Similarity=0.125 Sum_probs=154.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcH---HHH-HHHhcCCCCCCcEEEEecccCCCCCchhhhCC-
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNK---KKV-KHLLELPKASTHLTLWKADLAEEGNFDEPIRG- 77 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 77 (338)
..++||||||+|+||.+++++|+++|+ +|++++|+.... ..+ ..+... ..++.++.+|++|.+++.+++++
T Consensus 225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~---g~~v~~~~~Dv~d~~~v~~~~~~i 301 (486)
T 2fr1_A 225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL---GARTTVAACDVTDRESVRELLGGI 301 (486)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT---TCEEEEEECCTTCHHHHHHHHHTS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc---CCEEEEEEeCCCCHHHHHHHHHHH
Confidence 368999999999999999999999998 499999976432 222 112211 25789999999999988888764
Q ss_pred -----ccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 78 -----CTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 78 -----~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
+|+|||+||..... ..+.....++.|+.++.++.+++...+ .++||++||.+.+. ..
T Consensus 302 ~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~-~~~~V~~SS~a~~~--g~---------- 368 (486)
T 2fr1_A 302 GDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELD-LTAFVLFSSFASAF--GA---------- 368 (486)
T ss_dssp CTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSC-CSEEEEEEEHHHHT--CC----------
T ss_pred HhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCC-CCEEEEEcChHhcC--CC----------
Confidence 59999999965422 112334677889999999999998877 78999999975542 11
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCc
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQ 227 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (338)
.....|+.+|...+.+.+++.. .|+++++++||.+.+++..... . .. .+. .....
T Consensus 369 ----------~g~~~Yaaaka~l~~la~~~~~-~gi~v~~i~pG~~~~~gm~~~~---~---~~-------~~~-~~g~~ 423 (486)
T 2fr1_A 369 ----------PGLGGYAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEGP---V---AD-------RFR-RHGVI 423 (486)
T ss_dssp ----------TTCTTTHHHHHHHHHHHHHHHH-TTCCCEEEEECCBC-------------------------CT-TTTEE
T ss_pred ----------CCCHHHHHHHHHHHHHHHHHHh-cCCeEEEEECCeeCCCcccchh---H---HH-------HHH-hcCCC
Confidence 1235799999999998877654 5999999999998876422110 0 00 000 01146
Q ss_pred cccHHHHHHHHHHhhcCCCCCCceEEecCCCCHHHHHHHHHH
Q 040253 228 FVHLDDLCSAHIFLFEHPNAKGRYICSSHPATILELAKFLRE 269 (338)
Q Consensus 228 ~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~t~~e~~~~i~~ 269 (338)
+++.+|+++++..++..... .+.+. .+.+..+...+..
T Consensus 424 ~i~~e~~a~~l~~~l~~~~~--~~~v~--~~d~~~~~~~~~~ 461 (486)
T 2fr1_A 424 EMPPETACRALQNALDRAEV--CPIVI--DVRWDRFLLAYTA 461 (486)
T ss_dssp CBCHHHHHHHHHHHHHTTCS--SCEEC--EECHHHHHHHHTS
T ss_pred CCCHHHHHHHHHHHHhCCCC--eEEEE--eCCHHHHhhhhcc
Confidence 89999999999999987532 22232 2567777665544
No 287
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=99.82 E-value=4.7e-19 Score=150.84 Aligned_cols=219 Identities=16% Similarity=0.119 Sum_probs=153.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|++|||||++-||..+++.|++.|.+|.+.+|+.+..++...... .++..+.+|++|++++.++++
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g-----~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIG-----GGAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC-----TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-----CCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 36899999999999999999999999999999998766554433221 467889999999998887664
Q ss_pred CccEEEEecccCC-----CCCCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCCCch
Q 040253 77 GCTGVFHLATPMD-----FESKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDL 150 (338)
Q Consensus 77 ~~d~vi~~a~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~ 150 (338)
++|++||+||... ....+.++..+++|+.++..+.+++...- +..++|++||.....
T Consensus 103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~----------------- 165 (273)
T 4fgs_A 103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGST----------------- 165 (273)
T ss_dssp CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGS-----------------
T ss_pred CCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhcc-----------------
Confidence 6999999998543 22234456789999999999998876542 235899999976542
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChh---HHHhhhhcccCCCCCCCCC
Q 040253 151 DFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPS---LITALSPITRNEAHYPIIK 224 (338)
Q Consensus 151 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 224 (338)
+.+....|+.+|.....+.+.++.++ ||++..|-||.+-.+......... ........... .++
T Consensus 166 -----~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~-~Pl---- 235 (273)
T 4fgs_A 166 -----GTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQ-VPM---- 235 (273)
T ss_dssp -----CCTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHH-STT----
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhc-CCC----
Confidence 11134589999999999999999886 799999999998766432211110 00111111111 112
Q ss_pred CCccccHHHHHHHHHHhhcCCCC--CC-ceEEec
Q 040253 225 QGQFVHLDDLCSAHIFLFEHPNA--KG-RYICSS 255 (338)
Q Consensus 225 ~~~~i~v~D~a~~~~~~l~~~~~--~~-~~~~~~ 255 (338)
.++...+|+|.++++++..... .| .+.+.+
T Consensus 236 -gR~g~peeiA~~v~FLaSd~a~~iTG~~i~VDG 268 (273)
T 4fgs_A 236 -GRVGRAEEVAAAALFLASDDSSFVTGAELFVDG 268 (273)
T ss_dssp -SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEEST
T ss_pred -CCCcCHHHHHHHHHHHhCchhcCccCCeEeECc
Confidence 4578899999999999965332 34 444533
No 288
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=99.81 E-value=1e-19 Score=154.20 Aligned_cols=210 Identities=13% Similarity=0.088 Sum_probs=140.1
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEE-E--cCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRAT-V--RDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
+|+++||||+|+||.+++++|+++|++|+++ + |+.+......... .+. |+.|.+++.++++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~------~~~-----~~~~~~~v~~~~~~~~~~ 69 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN------PGT-----IALAEQKPERLVDATLQH 69 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS------TTE-----EECCCCCGGGHHHHHGGG
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh------CCC-----cccCHHHHHHHHHHHHHH
Confidence 4789999999999999999999999999998 5 8765544433211 112 2235666555443
Q ss_pred --CccEEEEecccCCC---C-----CCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCc
Q 040253 77 --GCTGVFHLATPMDF---E-----SKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVY 142 (338)
Q Consensus 77 --~~d~vi~~a~~~~~---~-----~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~ 142 (338)
++|++||+||.... . ..+..+..+++|+.++.++++++. +.+ ..++|++||...+. .
T Consensus 70 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~--~------ 140 (244)
T 1zmo_A 70 GEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKK--P------ 140 (244)
T ss_dssp SSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTS--C------
T ss_pred cCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCC--C------
Confidence 68999999986432 1 112334678999999999888774 344 57999999987663 1
Q ss_pred CCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHH--HhhhhcccCC
Q 040253 143 DETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLI--TALSPITRNE 217 (338)
Q Consensus 143 ~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~--~~~~~~~~~~ 217 (338)
..+...|+.+|.+.+.+.+.++.++ |+++++++||.+..+.... ...+. ..........
T Consensus 141 --------------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~--~~~~~~~~~~~~~~~~~ 204 (244)
T 1zmo_A 141 --------------LAYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFP--TSDWENNPELRERVDRD 204 (244)
T ss_dssp --------------CTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBC--HHHHHHCHHHHHHHHHH
T ss_pred --------------CCCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccc--cccccchHHHHHHHhcC
Confidence 1134589999999999999988774 8999999999887654200 01110 0000000000
Q ss_pred CCCCCCCCCccccHHHHHHHHHHhhcCCCC--CC-ceEEec
Q 040253 218 AHYPIIKQGQFVHLDDLCSAHIFLFEHPNA--KG-RYICSS 255 (338)
Q Consensus 218 ~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~-~~~~~~ 255 (338)
... ..+...+|+|++++.++..... .| .+.+.+
T Consensus 205 ~p~-----~r~~~pe~vA~~v~~l~s~~~~~~tG~~i~vdg 240 (244)
T 1zmo_A 205 VPL-----GRLGRPDEMGALITFLASRRAAPIVGQFFAFTG 240 (244)
T ss_dssp CTT-----CSCBCHHHHHHHHHHHHTTTTGGGTTCEEEEST
T ss_pred CCC-----CCCcCHHHHHHHHHHHcCccccCccCCEEEeCC
Confidence 111 3578999999999999975432 34 445544
No 289
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=99.81 E-value=1.1e-18 Score=145.77 Aligned_cols=209 Identities=16% Similarity=0.123 Sum_probs=149.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC--CccEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--GCTGV 81 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--~~d~v 81 (338)
.+|+++||||++-||..+++.|++.|.+|.+.+|+... +..+.+... ..++..+.+|++|++++.++++ ++|++
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~-~~~~~~~~~---g~~~~~~~~Dv~d~~~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD-ETLDIIAKD---GGNASALLIDFADPLAAKDSFTDAGFDIL 83 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH-HHHHHHHHT---TCCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH-HHHHHHHHh---CCcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence 47999999999999999999999999999999997653 222223222 2578999999999999888876 69999
Q ss_pred EEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhh
Q 040253 82 FHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDF 152 (338)
Q Consensus 82 i~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~ 152 (338)
||+||.... ...+.++..+++|+.++..+.+++. +.++-.++|++||.....
T Consensus 84 VNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~------------------- 144 (247)
T 4hp8_A 84 VNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQ------------------- 144 (247)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTS-------------------
T ss_pred EECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCC-------------------
Confidence 999986442 2234456789999999998887643 233246899999976542
Q ss_pred hhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccc
Q 040253 153 VRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFV 229 (338)
Q Consensus 153 ~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 229 (338)
.......|+.||.....+.+.++.++ ||++..|-||.+-.|......... ...... ....++ .++-
T Consensus 145 ---g~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~--~~~~~~-~~~~Pl-----gR~g 213 (247)
T 4hp8_A 145 ---GGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADA--ARNKAI-LERIPA-----GRWG 213 (247)
T ss_dssp ---CCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSH--HHHHHH-HTTCTT-----SSCB
T ss_pred ---CCCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCH--HHHHHH-HhCCCC-----CCCc
Confidence 11134589999999999999998886 899999999988655321100000 000101 111122 4578
Q ss_pred cHHHHHHHHHHhhcCCC
Q 040253 230 HLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 230 ~v~D~a~~~~~~l~~~~ 246 (338)
..+|+|.++++++....
T Consensus 214 ~peeiA~~v~fLaSd~a 230 (247)
T 4hp8_A 214 HSEDIAGAAVFLSSAAA 230 (247)
T ss_dssp CTHHHHHHHHHHTSGGG
T ss_pred CHHHHHHHHHHHhCchh
Confidence 89999999999986543
No 290
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=99.81 E-value=1e-18 Score=148.83 Aligned_cols=213 Identities=16% Similarity=0.085 Sum_probs=149.8
Q ss_pred CCCCcEEEEeCCch--hhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC---
Q 040253 2 GSIAETVCVTGASG--FIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR--- 76 (338)
Q Consensus 2 ~~~~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 76 (338)
+..+|+++||||+| -||.+++++|++.|++|.+.+|+.+..+......... ...++..+.+|++|++++.++++
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL-NQPEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG-TCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-CCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 34689999999887 8999999999999999999999987776665544321 12478899999999988877653
Q ss_pred ----CccEEEEecccCCCC------CCC---ccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCc
Q 040253 77 ----GCTGVFHLATPMDFE------SKD---PENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVY 142 (338)
Q Consensus 77 ----~~d~vi~~a~~~~~~------~~~---~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~ 142 (338)
++|++||+||..... .+. .....+++|+.+...+..++.... ...++|++||.....
T Consensus 82 ~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~--------- 152 (256)
T 4fs3_A 82 KDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEF--------- 152 (256)
T ss_dssp HHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTS---------
T ss_pred HHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccccc---------
Confidence 799999999854311 011 122345778888877777665432 246899999975442
Q ss_pred CCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCC
Q 040253 143 DETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAH 219 (338)
Q Consensus 143 ~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~ 219 (338)
+.+....|+.+|...+.+.+.++.++ |++++.|.||.+-.+......... ......... .+
T Consensus 153 -------------~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~--~~~~~~~~~-~P 216 (256)
T 4fs3_A 153 -------------AVQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFN--TILKEIKER-AP 216 (256)
T ss_dssp -------------CCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHH--HHHHHHHHH-ST
T ss_pred -------------CcccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCH--HHHHHHHhc-CC
Confidence 11234589999999999999998875 899999999988765433221111 111111111 11
Q ss_pred CCCCCCCccccHHHHHHHHHHhhcCC
Q 040253 220 YPIIKQGQFVHLDDLCSAHIFLFEHP 245 (338)
Q Consensus 220 ~~~~~~~~~i~v~D~a~~~~~~l~~~ 245 (338)
+ .++...+|+|+++++++...
T Consensus 217 l-----~R~g~peevA~~v~fL~Sd~ 237 (256)
T 4fs3_A 217 L-----KRNVDQVEVGKTAAYLLSDL 237 (256)
T ss_dssp T-----SSCCCHHHHHHHHHHHHSGG
T ss_pred C-----CCCcCHHHHHHHHHHHhCch
Confidence 2 45788999999999998643
No 291
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Probab=99.81 E-value=7.2e-20 Score=161.55 Aligned_cols=220 Identities=17% Similarity=0.147 Sum_probs=148.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhc----CCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLE----LPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
+|+||||||+|+||.+++++|+++|++|++++|+..+......... ......++.++.+|++|.+++.++++
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 81 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE 81 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhc
Confidence 5789999999999999999999999999988886544332222111 01112478999999999998888776
Q ss_pred -CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 -GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 -~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
++|++||+||..... ..+..+..+++|+.++.++++++ ++.+ ..+||++||...+. .
T Consensus 82 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~--~---------- 148 (327)
T 1jtv_A 82 GRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLM--G---------- 148 (327)
T ss_dssp SCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTS--C----------
T ss_pred CCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCccccc--C----------
Confidence 489999999864321 12234578899999999999885 3344 57999999986653 1
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH---cCccEEEEcCCceeCCCCCCCCChh----------HHHhhhhc
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE---NNIDFISIIPSLVVGPFLTSSMPPS----------LITALSPI 213 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~ilRp~~v~G~~~~~~~~~~----------~~~~~~~~ 213 (338)
......|+.+|...+.+.+.++.+ +|+++++++||.|..+......... ........
T Consensus 149 ----------~~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (327)
T 1jtv_A 149 ----------LPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQY 218 (327)
T ss_dssp ----------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHH
T ss_pred ----------CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHH
Confidence 113458999999999999999886 5899999999999876532211100 00000000
Q ss_pred ccC-CCCCCCCCCCc-cccHHHHHHHHHHhhcCCCCCCceE
Q 040253 214 TRN-EAHYPIIKQGQ-FVHLDDLCSAHIFLFEHPNAKGRYI 252 (338)
Q Consensus 214 ~~~-~~~~~~~~~~~-~i~v~D~a~~~~~~l~~~~~~~~~~ 252 (338)
... ...+ .. .+..+|+|++++.++..+.....|.
T Consensus 219 ~~~~~~~~-----~~~~~~pedvA~~i~~l~~~~~~~~~~~ 254 (327)
T 1jtv_A 219 LAHSKQVF-----REAAQNPEEVAEVFLTALRAPKPTLRYF 254 (327)
T ss_dssp HHHHHHHH-----HHHCBCHHHHHHHHHHHHHCSSCCSEEE
T ss_pred HHHHHHhh-----hhcCCCHHHHHHHHHHHHcCCCCCeEEE
Confidence 000 0000 11 2589999999999998765444454
No 292
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Probab=99.80 E-value=4.4e-19 Score=155.84 Aligned_cols=265 Identities=15% Similarity=0.100 Sum_probs=162.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEc---------CCCcHHHHH-HHhcCCCCCCcEEEEecccCCCCCchh
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVR---------DPDNKKKVK-HLLELPKASTHLTLWKADLAEEGNFDE 73 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 73 (338)
.+|+|+||||+|+||.+++++|+++|++|++.+| +.+...... .+.... . ...+|+.|.+++.+
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~---~---~~~~D~~~~~~~~~ 81 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRG---G---KAVANYDSVEAGEK 81 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTT---C---EEEEECCCGGGHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhC---C---eEEEeCCCHHHHHH
Confidence 4589999999999999999999999999999765 333322221 121110 1 23479999887666
Q ss_pred hh-------CCccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCC
Q 040253 74 PI-------RGCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEH 137 (338)
Q Consensus 74 ~~-------~~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~ 137 (338)
++ .++|++||+||..... ..+..+..+++|+.++.++.+++ ++.+ ..++|++||..... ..
T Consensus 82 ~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~--~~ 158 (319)
T 1gz6_A 82 LVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIY--GN 158 (319)
T ss_dssp HHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--CC
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcc--CC
Confidence 54 3799999999965422 12234567899999998888876 3344 57999999975432 10
Q ss_pred CCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcc
Q 040253 138 RKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPIT 214 (338)
Q Consensus 138 ~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~ 214 (338)
.+...|+.+|.+.+.+.+.++.++ |+++++++||.+ .+. .... .
T Consensus 159 --------------------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~-----~~~~---~---- 205 (319)
T 1gz6_A 159 --------------------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRM-----TETV---M---- 205 (319)
T ss_dssp --------------------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STT-----TGGG---S----
T ss_pred --------------------CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccc-----cccc---C----
Confidence 134589999999999999998874 899999999876 221 1000 0
Q ss_pred cCCCCCCCCCCCccccHHHHHHHHHHhhcCCC--CCCceEEecCCCCHHHHHHHHHHhCCCCCCCC-CCCCccccccccc
Q 040253 215 RNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN--AKGRYICSSHPATILELAKFLREKYPEFNVPT-EFEDVDENMKNML 291 (338)
Q Consensus 215 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~~~~~~~~~t~~e~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~ 291 (338)
+ ....+++..+|+|.++++++..+. .+..|++++.-..... +.+..+. ..+. .....+......+
T Consensus 206 --~-----~~~~~~~~p~dvA~~~~~l~s~~~~~tG~~~~v~GG~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~lw 273 (319)
T 1gz6_A 206 --P-----EDLVEALKPEYVAPLVLWLCHESCEENGGLFEVGAGWIGKLR----WERTLGA-IVRKRNQPMTPEAVRDNW 273 (319)
T ss_dssp --C-----HHHHHHSCGGGTHHHHHHHTSTTCCCCSCEEEEETTEEEEEE----EEECCCE-ECCBTTBCCCHHHHHHTH
T ss_pred --C-----hhhhccCCHHHHHHHHHHHhCchhhcCCCEEEECCCeEEEEe----eeeccce-eccCCCCCCCHHHHHHHH
Confidence 0 000235789999999999987542 2335555443210000 0000010 0000 0001111122222
Q ss_pred cchhhhhhcCCcccccHHHHHHHHHHHHHHcCC
Q 040253 292 FSSKKLTDLGFKFKYSLDDMFTGAVDTCRAKGL 324 (338)
Q Consensus 292 ~~~~~~~~lg~~~~~~~~~~i~~~~~~~~~~~~ 324 (338)
..+..+ .|+.....+.+.+.++++.+.+...
T Consensus 274 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (319)
T 1gz6_A 274 VKICDF--SNASKPKSIQESTGGIIEVLHKIDS 304 (319)
T ss_dssp HHHTCC--TTCBCCCCHHHHHHHHHHHHHHHC-
T ss_pred HHhhcc--ccccCCCchHHHHHHHHHHHhhccc
Confidence 211111 4666556799999999887765543
No 293
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=99.80 E-value=1.4e-19 Score=168.11 Aligned_cols=223 Identities=17% Similarity=0.109 Sum_probs=157.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCc---HHHH-HHHhcCCCCCCcEEEEecccCCCCCchhhhCC-
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDN---KKKV-KHLLELPKASTHLTLWKADLAEEGNFDEPIRG- 77 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~- 77 (338)
..++||||||+|+||.+++++|.++|+ +|++++|+... ...+ ..+.. ...++.++.+|++|.+++.+++++
T Consensus 258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~---~g~~v~~~~~Dvtd~~~v~~~~~~~ 334 (511)
T 2z5l_A 258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRG---HGCEVVHAACDVAERDALAALVTAY 334 (511)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHT---TTCEEEEEECCSSCHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHh---cCCEEEEEEeCCCCHHHHHHHHhcC
Confidence 358999999999999999999999998 68999997643 2222 22222 125789999999999999998864
Q ss_pred -ccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC-CCccEEEEecCceeeeccCCCCCCcCCCCCCch
Q 040253 78 -CTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA-KTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDL 150 (338)
Q Consensus 78 -~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~ 150 (338)
+|+|||+||..... ..+..+..+..|+.++.++.+++... + .++||++||...+. ..
T Consensus 335 ~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~-~~~~V~~SS~a~~~--g~------------- 398 (511)
T 2z5l_A 335 PPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKG-LDAFVLFSSVTGTW--GN------------- 398 (511)
T ss_dssp CCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTT-CCCEEEEEEGGGTT--CC-------------
T ss_pred CCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeCHHhcC--CC-------------
Confidence 99999999965422 11223456788999999999998776 5 78999999975432 11
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCcccc
Q 040253 151 DFVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVH 230 (338)
Q Consensus 151 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 230 (338)
.....|+.+|...+.+++.+. ..|+++++++||.+.+.+... ......+. . .....++
T Consensus 399 -------~g~~~YaaaKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~---~~~~~~~~---~--------~g~~~l~ 456 (511)
T 2z5l_A 399 -------AGQGAYAAANAALDALAERRR-AAGLPATSVAWGLWGGGGMAA---GAGEESLS---R--------RGLRAMD 456 (511)
T ss_dssp -------TTBHHHHHHHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCC---CHHHHHHH---H--------HTBCCBC
T ss_pred -------CCCHHHHHHHHHHHHHHHHHH-HcCCcEEEEECCcccCCcccc---cccHHHHH---h--------cCCCCCC
Confidence 134589999999999988764 559999999998874332211 11111110 0 1145789
Q ss_pred HHHHHHHHHHhhcCCCCCCceEEecCCCCHHHHHHHHHHhC
Q 040253 231 LDDLCSAHIFLFEHPNAKGRYICSSHPATILELAKFLREKY 271 (338)
Q Consensus 231 v~D~a~~~~~~l~~~~~~~~~~~~~~~~t~~e~~~~i~~~~ 271 (338)
.+|+++++..++.++.. .+.+. .+.+..+...+....
T Consensus 457 ~e~~a~~l~~al~~~~~--~v~v~--~~d~~~~~~~~~~~~ 493 (511)
T 2z5l_A 457 PDAAVDALLGAMGRNDV--CVTVV--DVDWERFAPATNAIR 493 (511)
T ss_dssp HHHHHHHHHHHHHHTCS--EEEEC--CBCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCC--EEEEE--eCCHHHHHhhhcccC
Confidence 99999999999986532 22222 356777777666543
No 294
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A
Probab=99.80 E-value=8e-19 Score=161.03 Aligned_cols=214 Identities=15% Similarity=0.057 Sum_probs=148.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
..++++||||+|.||.+++++|+++|++|++++|+... +.+...... .++.++.+|++|.+++.++++
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~----~~~~~~~~Dvtd~~~v~~~~~~~~~~~g 286 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADK----VGGTALTLDVTADDAVDKITAHVTEHHG 286 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHH----HTCEEEECCTTSTTHHHHHHHHHHHHST
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHH----cCCeEEEEecCCHHHHHHHHHHHHHHcC
Confidence 35899999999999999999999999999999986433 222222111 245789999999998887764
Q ss_pred C-ccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhC----CCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 G-CTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNA----KTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 ~-~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~----~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
+ +|+|||+||..... ..+..+..+++|+.++.++.+++... + ..+||++||...+.
T Consensus 287 ~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~------------- 352 (454)
T 3u0b_A 287 GKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIA------------- 352 (454)
T ss_dssp TCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHH-------------
T ss_pred CCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCC-------------
Confidence 3 99999999965422 22234467899999999999998765 3 57999999987653
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPII 223 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (338)
.......|+.+|...+.+.+.++.++ |++++++.||.+..+..... ......... . ....
T Consensus 353 ---------g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~---~-~~~l--- 415 (454)
T 3u0b_A 353 ---------GNRGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAI-PLATREVGR---R-LNSL--- 415 (454)
T ss_dssp ---------CCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------CHHHH---H-SBTT---
T ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhc-chhhHHHHH---h-hccc---
Confidence 11245689999999998888887664 89999999999977643211 100000000 0 0011
Q ss_pred CCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 224 KQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 224 ~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
.++...+|+++++.+++.... ..| .+++.+
T Consensus 416 --~r~g~pedvA~~v~fL~s~~a~~itG~~i~vdG 448 (454)
T 3u0b_A 416 --FQGGQPVDVAELIAYFASPASNAVTGNTIRVCG 448 (454)
T ss_dssp --SSCBCHHHHHHHHHHHHCGGGTTCCSCEEEESS
T ss_pred --cCCCCHHHHHHHHHHHhCCccCCCCCcEEEECC
Confidence 346789999999999987433 233 556644
No 295
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=99.80 E-value=2.2e-19 Score=153.56 Aligned_cols=210 Identities=18% Similarity=0.172 Sum_probs=146.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHH---CCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLE---RGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
.+|+++||||+|+||.+++++|++ .|++|++++|+.+................++.++.+|++|++++.++++
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 368899999999999999999999 8999999999876544433221100001468999999999988776653
Q ss_pred -----Ccc--EEEEecccCCC--------CCCCccchhhhhhhHHHHHHHHHHHhCC-----CccEEEEecCceeeeccC
Q 040253 77 -----GCT--GVFHLATPMDF--------ESKDPENEVIRPTINGMVSIMRACKNAK-----TVRRLVFTSSAGTLDVEE 136 (338)
Q Consensus 77 -----~~d--~vi~~a~~~~~--------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~v~~Ss~~v~~~~~ 136 (338)
++| ++||+||.... ...+..+..+++|+.++.++++++...- ...++|++||...+.
T Consensus 85 ~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~--- 161 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQ--- 161 (259)
T ss_dssp SCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTS---
T ss_pred ccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcC---
Confidence 468 99999996432 1223345688999999999999886432 146899999987663
Q ss_pred CCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc-CccEEEEcCCceeCCCCCCCC----ChhHHHhhh
Q 040253 137 HRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN-NIDFISIIPSLVVGPFLTSSM----PPSLITALS 211 (338)
Q Consensus 137 ~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~ilRp~~v~G~~~~~~~----~~~~~~~~~ 211 (338)
+..+...|+.+|.+.+.+.+.++.++ +++++++.||.+-.+...... .........
T Consensus 162 -------------------~~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 222 (259)
T 1oaa_A 162 -------------------PYKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQ 222 (259)
T ss_dssp -------------------CCTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHH
T ss_pred -------------------CCCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHH
Confidence 11245689999999999999999887 589999999887543210000 000000000
Q ss_pred hcccCCCCCCCCCCCccccHHHHHHHHHHhhcC
Q 040253 212 PITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEH 244 (338)
Q Consensus 212 ~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~ 244 (338)
.. .. ...+...+|+|++++.++..
T Consensus 223 ---~~-~p-----~~~~~~p~dvA~~v~~l~~~ 246 (259)
T 1oaa_A 223 ---KL-KS-----DGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp ---HH-HH-----TTCSBCHHHHHHHHHHHHHH
T ss_pred ---Hh-hh-----cCCcCCHHHHHHHHHHHHhh
Confidence 00 00 13578999999999999864
No 296
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=99.79 E-value=7e-19 Score=151.18 Aligned_cols=219 Identities=12% Similarity=0.003 Sum_probs=149.3
Q ss_pred CCcEEEEeCC--chhhHHHHHHHHHHCCCeEEEEEcCCCcH-HHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC----
Q 040253 4 IAETVCVTGA--SGFIGSWLIMRLLERGYAVRATVRDPDNK-KKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR---- 76 (338)
Q Consensus 4 ~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~---- 76 (338)
.+|+++|||| +|+||.+++++|+++|++|++++|+.+.. +.+... . ..++.++.+|++|++++.++++
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~---~~~~~~~~~Dv~~~~~v~~~~~~~~~ 80 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR--L---PAKAPLLELDVQNEEHLASLAGRVTE 80 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT--S---SSCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh--c---CCCceEEEccCCCHHHHHHHHHHHHH
Confidence 3589999999 99999999999999999999999986542 222211 1 1467889999999998877765
Q ss_pred ------CccEEEEecccCCC----------CCCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCC
Q 040253 77 ------GCTGVFHLATPMDF----------ESKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRK 139 (338)
Q Consensus 77 ------~~d~vi~~a~~~~~----------~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~ 139 (338)
++|++||+||.... ...+..+..+++|+.++.++++++...- ...++|++||...++
T Consensus 81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~~~------ 154 (269)
T 2h7i_A 81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRA------ 154 (269)
T ss_dssp HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSC------
T ss_pred HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccccc------
Confidence 79999999986431 1112234578899999999999987642 135899999865432
Q ss_pred CCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCC----CCChhHH----H
Q 040253 140 PVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTS----SMPPSLI----T 208 (338)
Q Consensus 140 ~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~----~~~~~~~----~ 208 (338)
......|+.+|...+.+.+.++.++ |+++++++||.+..+.... ....... .
T Consensus 155 -----------------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 217 (269)
T 2h7i_A 155 -----------------MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQL 217 (269)
T ss_dssp -----------------CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHH
T ss_pred -----------------cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHH
Confidence 0134589999999999999988775 8999999999886542100 0000000 0
Q ss_pred hhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCCC--CC-ceEEec
Q 040253 209 ALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPNA--KG-RYICSS 255 (338)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~-~~~~~~ 255 (338)
........ .+. + +++...+|+|+++++++..... .| .+.+.+
T Consensus 218 ~~~~~~~~-~p~--~--rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdG 262 (269)
T 2h7i_A 218 LEEGWDQR-API--G--WNMKDATPVAKTVCALLSDWLPATTGDIIYADG 262 (269)
T ss_dssp HHHHHHHH-CTT--C--CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEEST
T ss_pred HHHhhhcc-CCc--c--cCCCCHHHHHHHHHHHhCchhccCcceEEEecC
Confidence 00000000 111 0 2477899999999999975332 34 345543
No 297
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=99.78 E-value=2.2e-18 Score=146.45 Aligned_cols=213 Identities=14% Similarity=0.087 Sum_probs=146.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-------
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR------- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~------- 76 (338)
.+|++|||||++-||.+++++|++.|++|++.+|+..... .....+.+|++|.+++.++++
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~------------~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 77 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL------------PEELFVEADLTTKEGCAIVAEATRQRLG 77 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS------------CTTTEEECCTTSHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC------------CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3589999999999999999999999999999999754311 233578899999988777653
Q ss_pred CccEEEEecccCCC-------CCCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCC
Q 040253 77 GCTGVFHLATPMDF-------ESKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDET 145 (338)
Q Consensus 77 ~~d~vi~~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~ 145 (338)
++|++||+||.... ...+.++..+++|+.++..+.+++. +.+ ..++|++||..... .
T Consensus 78 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~--~--------- 145 (261)
T 4h15_A 78 GVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVL--P--------- 145 (261)
T ss_dssp SCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTS--C---------
T ss_pred CCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhcc--C---------
Confidence 69999999985331 1123345678999999988877653 344 57899999976542 0
Q ss_pred CCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCC---------CC-hhHHHhhhh
Q 040253 146 SWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSS---------MP-PSLITALSP 212 (338)
Q Consensus 146 ~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~---------~~-~~~~~~~~~ 212 (338)
.+.....|+.+|...+.+.+.++.++ |+++++|.||.+-.+..... .. .........
T Consensus 146 ----------~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (261)
T 4h15_A 146 ----------LPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMD 215 (261)
T ss_dssp ----------CTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred ----------CCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHH
Confidence 00123579999999999999998875 89999999998864421000 00 000000000
Q ss_pred cccCCCCCCCCCCCccccHHHHHHHHHHhhcCCCC--CC-ceEEecC
Q 040253 213 ITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPNA--KG-RYICSSH 256 (338)
Q Consensus 213 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~-~~~~~~~ 256 (338)
. ....++ .++...+|+|+++++++..... .| .+.+.+.
T Consensus 216 ~-~~~~Pl-----gR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG 256 (261)
T 4h15_A 216 G-LGGIPL-----GRPAKPEEVANLIAFLASDRAASITGAEYTIDGG 256 (261)
T ss_dssp H-TTCCTT-----SSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred H-hcCCCC-----CCCcCHHHHHHHHHHHhCchhcCccCcEEEECCc
Confidence 0 011112 4688999999999999864332 33 5566543
No 298
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=99.77 E-value=2.5e-18 Score=149.92 Aligned_cols=225 Identities=14% Similarity=0.028 Sum_probs=142.3
Q ss_pred CCCCcEEEEeCCc--hhhHHHHHHHHHHCCCeEEEEEcCCCcH--------HHHHHHhcCCCCC--CcEEEEecc-----
Q 040253 2 GSIAETVCVTGAS--GFIGSWLIMRLLERGYAVRATVRDPDNK--------KKVKHLLELPKAS--THLTLWKAD----- 64 (338)
Q Consensus 2 ~~~~~~ilVtGat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~--------~~~~~~~~~~~~~--~~~~~~~~D----- 64 (338)
...+|+++||||+ |+||.+++++|+++|++|++++|++... ..++.+..+.... .....+.+|
T Consensus 5 ~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (297)
T 1d7o_A 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN 84 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred ccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence 3446899999999 9999999999999999999998752100 0011111111000 012333332
Q ss_pred ---c----CC--------CCCchhhhC-------CccEEEEecccCC-------CCCCCccchhhhhhhHHHHHHHHHHH
Q 040253 65 ---L----AE--------EGNFDEPIR-------GCTGVFHLATPMD-------FESKDPENEVIRPTINGMVSIMRACK 115 (338)
Q Consensus 65 ---l----~d--------~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~ 115 (338)
+ +| .+++.++++ ++|++||+||... ....+..+..+++|+.++.++++++.
T Consensus 85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 164 (297)
T 1d7o_A 85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL 164 (297)
T ss_dssp GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 2 22 556665543 6999999998432 11122345688999999999999987
Q ss_pred hCC-CccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCC-chHHHHHHHHHHHHHHHHHH----cCccEEEEc
Q 040253 116 NAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTG-WMYFVSKTLAEQAAWKFAEE----NNIDFISII 189 (338)
Q Consensus 116 ~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~-~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilR 189 (338)
..- ...++|++||...+. .. +.. ..|+.+|.+.+.+.+.++.+ +|+++++++
T Consensus 165 ~~m~~~g~iv~isS~~~~~--~~--------------------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~ 222 (297)
T 1d7o_A 165 PIMNPGGASISLTYIASER--II--------------------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTIS 222 (297)
T ss_dssp GGEEEEEEEEEEECGGGTS--CC--------------------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHhccCceEEEEecccccc--CC--------------------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEe
Confidence 652 126899999976542 10 122 37999999999999988866 589999999
Q ss_pred CCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEecC
Q 040253 190 PSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSSH 256 (338)
Q Consensus 190 p~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~~ 256 (338)
||.+.++..... . ............ ..+ ..+...+|+|+++++++.... ..| .+++.+.
T Consensus 223 PG~v~T~~~~~~-~-~~~~~~~~~~~~-~p~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG 284 (297)
T 1d7o_A 223 AGPLGSRAAKAI-G-FIDTMIEYSYNN-API-----QKTLTADEVGNAAAFLVSPLASAITGATIYVDNG 284 (297)
T ss_dssp ECCCBCCCSSCC-S-HHHHHHHHHHHH-SSS-----CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred ccccccchhhhc-c-ccHHHHHHhhcc-CCC-----CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 999998764321 1 001111100011 111 347789999999999986432 234 5566543
No 299
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Probab=99.75 E-value=7.4e-18 Score=155.52 Aligned_cols=202 Identities=17% Similarity=0.122 Sum_probs=146.7
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCc---HHHHH-HHhcCCCCCCcEEEEecccCCCCCchhhhC---
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDN---KKKVK-HLLELPKASTHLTLWKADLAEEGNFDEPIR--- 76 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~---~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~--- 76 (338)
++++|||||+|.||.+++++|+++|+ +|++++|+... ...+. .+.. ...++.++.+|++|.+++.++++
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~---~g~~v~~~~~Dvtd~~~v~~~~~~i~ 315 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQ---LGVRVTIAACDAADREALAALLAELP 315 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHTCC
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHh---cCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 48999999999999999999999998 78888886433 22221 2222 12578999999999998888774
Q ss_pred ---CccEEEEecccC-CCC-----CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 77 ---GCTGVFHLATPM-DFE-----SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 77 ---~~d~vi~~a~~~-~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
++|+|||+||.. ... ..+..+..++.|+.++.++.+++...+ ..+||++||.+.+. ..
T Consensus 316 ~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~-~~~iV~~SS~a~~~--g~---------- 382 (496)
T 3mje_A 316 EDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLD-LDAFVLFSSGAAVW--GS---------- 382 (496)
T ss_dssp TTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSC-CSEEEEEEEHHHHT--TC----------
T ss_pred HhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccC-CCEEEEEeChHhcC--CC----------
Confidence 489999999975 321 112234678999999999999999887 78999999976552 11
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCc
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQ 227 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (338)
.....|+.+|...+.+.+++. ..|+++++|.||.+.+.+...... .... + ... ...
T Consensus 383 ----------~g~~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~~~-~~~~-l---~~~--------g~~ 438 (496)
T 3mje_A 383 ----------GGQPGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATDPE-VHDR-L---VRQ--------GVL 438 (496)
T ss_dssp ----------TTCHHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC-------CHH-H---HHT--------TEE
T ss_pred ----------CCcHHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccChH-HHHH-H---Hhc--------CCC
Confidence 134589999999999888765 459999999999887665332110 0000 0 011 134
Q ss_pred cccHHHHHHHHHHhhcCCC
Q 040253 228 FVHLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 228 ~i~v~D~a~~~~~~l~~~~ 246 (338)
.+..++.++++..++..+.
T Consensus 439 ~l~pe~~~~~l~~~l~~~~ 457 (496)
T 3mje_A 439 AMEPEHALGALDQMLENDD 457 (496)
T ss_dssp EECHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHcCCC
Confidence 6788999999999998753
No 300
>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}
Probab=99.71 E-value=9.2e-17 Score=141.39 Aligned_cols=228 Identities=12% Similarity=0.003 Sum_probs=121.5
Q ss_pred CCcEEEEeCC--chhhHHHHHHHHHHCCCeEEEEEcCC-----------CcHHHHHHH--------hc-CCCCCC---cE
Q 040253 4 IAETVCVTGA--SGFIGSWLIMRLLERGYAVRATVRDP-----------DNKKKVKHL--------LE-LPKAST---HL 58 (338)
Q Consensus 4 ~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~~~~--------~~-~~~~~~---~~ 58 (338)
.+|++||||| +|.||.+++++|+++|++|++++|++ ......+.+ .. ...... ..
T Consensus 8 ~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (319)
T 2ptg_A 8 RGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFD 87 (319)
T ss_dssp TTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCS
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhcccccccc
Confidence 3578999999 89999999999999999999998642 111110000 00 000000 02
Q ss_pred EEEecc------------cCC--------CCCchhhhC-------CccEEEEecccCC-------CCCCCccchhhhhhh
Q 040253 59 TLWKAD------------LAE--------EGNFDEPIR-------GCTGVFHLATPMD-------FESKDPENEVIRPTI 104 (338)
Q Consensus 59 ~~~~~D------------l~d--------~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~~~n~ 104 (338)
..+.+| ++| .+++.++++ ++|++||+||... ....+..+..+++|+
T Consensus 88 ~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~ 167 (319)
T 2ptg_A 88 KIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSS 167 (319)
T ss_dssp EEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHT
T ss_pred ccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhh
Confidence 444433 333 345655543 6999999998531 111223456789999
Q ss_pred HHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCC-chHHHHHHHHHHHHHHHHHH--
Q 040253 105 NGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTG-WMYFVSKTLAEQAAWKFAEE-- 180 (338)
Q Consensus 105 ~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~-~~Y~~sK~~~E~~~~~~~~~-- 180 (338)
.++.++++++...- ...++|++||...+. . .+.. ..|+.+|.+.+.+.+.++.+
T Consensus 168 ~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~--~--------------------~~~~~~~Y~asKaal~~l~~~la~el~ 225 (319)
T 2ptg_A 168 YSFVSLLQHFLPLMKEGGSALALSYIASEK--V--------------------IPGYGGGMSSAKAALESDCRTLAFEAG 225 (319)
T ss_dssp HHHHHHHHHHGGGEEEEEEEEEEEECC----------------------------------------THHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCceEEEEecccccc--c--------------------cCccchhhHHHHHHHHHHHHHHHHHhc
Confidence 99999999887652 126899999976553 0 0112 37999999999998888766
Q ss_pred --cCccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCC--CCC-ceEEec
Q 040253 181 --NNIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN--AKG-RYICSS 255 (338)
Q Consensus 181 --~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~-~~~~~~ 255 (338)
+|+++++|+||.+..+.................... .........+...+|+|+++++++.... ..| .+.+.+
T Consensus 226 ~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdG 303 (319)
T 2ptg_A 226 RARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDY--SEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDN 303 (319)
T ss_dssp HHHCCEEEEEEECCCC---------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred cccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHH--HhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECC
Confidence 489999999999876542110000000000000000 0000001347789999999999987532 244 445543
No 301
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=99.70 E-value=1.7e-16 Score=151.08 Aligned_cols=195 Identities=17% Similarity=0.085 Sum_probs=130.9
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEc---------CCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchh
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVR---------DPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDE 73 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 73 (338)
..+|+++||||+|.||.+++++|+++|++|++++| +.............. ... ..+|+.|.+++.+
T Consensus 17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~--~~~---~~~D~~d~~~~~~ 91 (613)
T 3oml_A 17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA--GGE---AVADYNSVIDGAK 91 (613)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT--TCC---EEECCCCGGGHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh--CCe---EEEEeCCHHHHHH
Confidence 35789999999999999999999999999999987 333333332211111 011 2479998887776
Q ss_pred hhC-------CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHH----HhCCCccEEEEecCceeeeccCC
Q 040253 74 PIR-------GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRAC----KNAKTVRRLVFTSSAGTLDVEEH 137 (338)
Q Consensus 74 ~~~-------~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~----~~~~~~~~~v~~Ss~~v~~~~~~ 137 (338)
+++ ++|++||+||..... ..+..+..+++|+.++.++.+++ ++.+ ..++|++||.+.+. .
T Consensus 92 ~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~--~- 167 (613)
T 3oml_A 92 VIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIY--G- 167 (613)
T ss_dssp HHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHH--C-
T ss_pred HHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcC--C-
Confidence 664 689999999965421 12334578899999999998887 4444 57999999976553 1
Q ss_pred CCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcc
Q 040253 138 RKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPIT 214 (338)
Q Consensus 138 ~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~ 214 (338)
......|+.+|.+.+.+.+.++.++ |++++++.|+.+- +........
T Consensus 168 -------------------~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t-~~~~~~~~~---------- 217 (613)
T 3oml_A 168 -------------------NFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAAS-RMTEGILPD---------- 217 (613)
T ss_dssp -------------------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCCCH----------
T ss_pred -------------------CCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCC-hhhhhccch----------
Confidence 1134589999999999999998875 8999999998541 111100000
Q ss_pred cCCCCCCCCCCCccccHHHHHHHHHHhhcCC
Q 040253 215 RNEAHYPIIKQGQFVHLDDLCSAHIFLFEHP 245 (338)
Q Consensus 215 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 245 (338)
...+.+..+|+|.++++++...
T Consensus 218 ---------~~~~~~~pedvA~~v~~L~s~~ 239 (613)
T 3oml_A 218 ---------ILFNELKPKLIAPVVAYLCHES 239 (613)
T ss_dssp ---------HHHTTCCGGGTHHHHHHTTSTT
T ss_pred ---------hhhhcCCHHHHHHHHHHhcCCC
Confidence 0023457899999999998754
No 302
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=99.68 E-value=4.7e-16 Score=136.61 Aligned_cols=224 Identities=16% Similarity=0.059 Sum_probs=137.6
Q ss_pred CCcEEEEeCC--chhhHHHHHHHHHHCCCeEEEEEcCCC--------cHHHHHHHhcCCCCC--CcEEEEecc-------
Q 040253 4 IAETVCVTGA--SGFIGSWLIMRLLERGYAVRATVRDPD--------NKKKVKHLLELPKAS--THLTLWKAD------- 64 (338)
Q Consensus 4 ~~~~ilVtGa--tG~iG~~l~~~L~~~g~~V~~~~r~~~--------~~~~~~~~~~~~~~~--~~~~~~~~D------- 64 (338)
.+|+++|||| +|.||.+++++|+++|++|++++|++. ....++......... ..+..+.+|
T Consensus 8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (315)
T 2o2s_A 8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPE 87 (315)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTT
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccc
Confidence 3588999999 899999999999999999999987531 000111111111110 012333333
Q ss_pred -----cCC--------CCCchhhhC-------CccEEEEecccCC-------CCCCCccchhhhhhhHHHHHHHHHHHhC
Q 040253 65 -----LAE--------EGNFDEPIR-------GCTGVFHLATPMD-------FESKDPENEVIRPTINGMVSIMRACKNA 117 (338)
Q Consensus 65 -----l~d--------~~~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 117 (338)
++| .+++.++++ ++|++||+||... ....+..+..+++|+.++..+++++...
T Consensus 88 ~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 167 (315)
T 2o2s_A 88 DVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPI 167 (315)
T ss_dssp SSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTT
T ss_pred hhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 332 556665543 6999999998532 1112234567899999999999998654
Q ss_pred C-CccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCC-chHHHHHHHHHHHHHHHHHH----cCccEEEEcCC
Q 040253 118 K-TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTG-WMYFVSKTLAEQAAWKFAEE----NNIDFISIIPS 191 (338)
Q Consensus 118 ~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~-~~Y~~sK~~~E~~~~~~~~~----~~~~~~ilRp~ 191 (338)
- ...++|++||...+. .. ... ..|+.+|...+.+.+.++.+ +|+++++++||
T Consensus 168 m~~~g~Iv~isS~~~~~--~~--------------------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG 225 (315)
T 2o2s_A 168 MNEGGSAVTLSYLAAER--VV--------------------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAG 225 (315)
T ss_dssp EEEEEEEEEEEEGGGTS--CC--------------------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEC
T ss_pred HhcCCEEEEEecccccc--cC--------------------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecc
Confidence 2 125899999976542 10 112 37999999999999888765 58999999999
Q ss_pred ceeCCCCCC----CCChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCC--CCCc-eEEec
Q 040253 192 LVVGPFLTS----SMPPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPN--AKGR-YICSS 255 (338)
Q Consensus 192 ~v~G~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~--~~~~-~~~~~ 255 (338)
.+..+.... ................ ... ..+...+|+|+++++++.... ..|. +.+.+
T Consensus 226 ~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~p~-----~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdG 290 (315)
T 2o2s_A 226 PLKSRAASAIGKSGEKSFIDYAIDYSYNN-APL-----RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDN 290 (315)
T ss_dssp CCCCHHHHHTTCSSSSCHHHHHHHHHHHH-SSS-----CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEEST
T ss_pred cccchhhhhccccccchhHHHHHHHHhcc-CCC-----CCCCCHHHHHHHHHHHhCchhccCcCCEEEECC
Confidence 886542100 0000000000000000 111 347789999999999987432 2444 44543
No 303
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=99.65 E-value=3e-16 Score=146.43 Aligned_cols=223 Identities=16% Similarity=0.072 Sum_probs=150.5
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCe-EEEE-EcCCCc-------------HHH-HHHHhcCCCCCCcEEEEecccCC
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYA-VRAT-VRDPDN-------------KKK-VKHLLELPKASTHLTLWKADLAE 67 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~-------------~~~-~~~~~~~~~~~~~~~~~~~Dl~d 67 (338)
..+++|||||+|.||.+++++|+++|++ |+++ +|+... ... ...+.. ...++.++.+|++|
T Consensus 250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~---~g~~v~~~~~Dvtd 326 (525)
T 3qp9_A 250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELAD---LGATATVVTCDLTD 326 (525)
T ss_dssp TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHH---HTCEEEEEECCTTS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHh---cCCEEEEEECCCCC
Confidence 3589999999999999999999999987 5555 776422 111 121211 12578999999999
Q ss_pred CCCchhhhC------CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhCCC----ccEEEEecCceee
Q 040253 68 EGNFDEPIR------GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNAKT----VRRLVFTSSAGTL 132 (338)
Q Consensus 68 ~~~~~~~~~------~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~v~~Ss~~v~ 132 (338)
.+++.++++ .+|+|||+||..... ..+..+..++.|+.++.++.+++..... ..+||++||.+.+
T Consensus 327 ~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~ 406 (525)
T 3qp9_A 327 AEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI 406 (525)
T ss_dssp HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc
Confidence 998888775 479999999965422 1122346788999999999999876541 4689999997655
Q ss_pred eccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHHhhhh
Q 040253 133 DVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLITALSP 212 (338)
Q Consensus 133 ~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~ 212 (338)
. . ......|+.+|...+.+.+++. ..|+++++|.||.+ +.+... .......+.
T Consensus 407 ~--g--------------------~~g~~~YaaaKa~l~~lA~~~~-~~gi~v~sI~pG~~-~tgm~~--~~~~~~~~~- 459 (525)
T 3qp9_A 407 W--G--------------------GAGQGAYAAGTAFLDALAGQHR-ADGPTVTSVAWSPW-EGSRVT--EGATGERLR- 459 (525)
T ss_dssp T--C--------------------CTTCHHHHHHHHHHHHHHTSCC-SSCCEEEEEEECCB-TTSGGG--SSHHHHHHH-
T ss_pred C--C--------------------CCCCHHHHHHHHHHHHHHHHHH-hCCCCEEEEECCcc-cccccc--chhhHHHHH-
Confidence 3 1 1134589999999998876553 34999999999988 322110 011111111
Q ss_pred cccCCCCCCCCCCCccccHHHHHHHHHHhhcCCCCCCceEEecCCCCHHHHHHHHHHh
Q 040253 213 ITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPNAKGRYICSSHPATILELAKFLREK 270 (338)
Q Consensus 213 ~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~~~~~~~~~~~~t~~e~~~~i~~~ 270 (338)
.. ....+..+++++++..++..+.. . +....+.+..+...+...
T Consensus 460 --~~--------g~~~l~pee~a~~l~~~l~~~~~---~-v~v~~~dw~~~~~~~~~~ 503 (525)
T 3qp9_A 460 --RL--------GLRPLAPATALTALDTALGHGDT---A-VTIADVDWSSFAPGFTTA 503 (525)
T ss_dssp --HT--------TBCCBCHHHHHHHHHHHHHHTCS---E-EEECCBCHHHHHHHHHSS
T ss_pred --hc--------CCCCCCHHHHHHHHHHHHhCCCC---e-EEEEeCCHHHHHhhcccc
Confidence 11 13468899999999999987531 1 222345676666665543
No 304
>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...
Probab=99.64 E-value=7.8e-16 Score=135.96 Aligned_cols=170 Identities=12% Similarity=0.044 Sum_probs=120.3
Q ss_pred CcEEEEeCCch--hhHHHHHHHHHHCCCeEEEEEcCCC---------cHHHHHHHhcC-CCCCCcEEEEecccCCC--C-
Q 040253 5 AETVCVTGASG--FIGSWLIMRLLERGYAVRATVRDPD---------NKKKVKHLLEL-PKASTHLTLWKADLAEE--G- 69 (338)
Q Consensus 5 ~~~ilVtGatG--~iG~~l~~~L~~~g~~V~~~~r~~~---------~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~--~- 69 (338)
.|+++||||++ .||.+++++|+++|++|++.+|++. ........... ......+..+.+|+++. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 58999999875 9999999999999999998876541 11111111111 11124578888999887 6
Q ss_pred -----------------CchhhhC-------CccEEEEecccCC-------CCCCCccchhhhhhhHHHHHHHHHHHhCC
Q 040253 70 -----------------NFDEPIR-------GCTGVFHLATPMD-------FESKDPENEVIRPTINGMVSIMRACKNAK 118 (338)
Q Consensus 70 -----------------~~~~~~~-------~~d~vi~~a~~~~-------~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 118 (338)
++.++++ ++|++||+||... ....+..+..+++|+.++..+.+++...-
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6666553 6899999998531 11222345789999999999999886542
Q ss_pred -CccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCc-hHHHHHHHHHHHHHHHHHH----cCccEEEEcCCc
Q 040253 119 -TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGW-MYFVSKTLAEQAAWKFAEE----NNIDFISIIPSL 192 (338)
Q Consensus 119 -~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~-~Y~~sK~~~E~~~~~~~~~----~~~~~~ilRp~~ 192 (338)
...++|++||...+. . .+... .|+.+|.+.+.+.+.++.+ +|++++++.||.
T Consensus 162 ~~~g~Iv~isS~~~~~--~--------------------~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~ 219 (329)
T 3lt0_A 162 KPQSSIISLTYHASQK--V--------------------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGP 219 (329)
T ss_dssp EEEEEEEEEECGGGTS--C--------------------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
T ss_pred hhCCeEEEEeCccccC--C--------------------CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecce
Confidence 125899999976542 1 01222 7999999999988887765 489999999998
Q ss_pred eeCC
Q 040253 193 VVGP 196 (338)
Q Consensus 193 v~G~ 196 (338)
+..+
T Consensus 220 v~T~ 223 (329)
T 3lt0_A 220 LKSR 223 (329)
T ss_dssp CCCH
T ss_pred eech
Confidence 8654
No 305
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Probab=99.55 E-value=8.4e-15 Score=145.97 Aligned_cols=207 Identities=14% Similarity=0.088 Sum_probs=137.7
Q ss_pred CCCcEEEEeCCchh-hHHHHHHHHHHCCCeEEEEE-cCCCcHHHH-HHHhcC-CCCCCcEEEEecccCCCCCchhhhC--
Q 040253 3 SIAETVCVTGASGF-IGSWLIMRLLERGYAVRATV-RDPDNKKKV-KHLLEL-PKASTHLTLWKADLAEEGNFDEPIR-- 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~-~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~-- 76 (338)
..++++|||||+|. ||.+++++|++.|++|++++ |+.+..... +.+... .....++.++.+|++|.+++.++++
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I 553 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 553 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHH
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHH
Confidence 34688999999998 99999999999999999884 655443332 222111 1113578999999999998887652
Q ss_pred -----------CccEEEEecccCCCC--C------CCccchhhhhhhHHHHHHHHHHHh--C---CCccEEEEecCceee
Q 040253 77 -----------GCTGVFHLATPMDFE--S------KDPENEVIRPTINGMVSIMRACKN--A---KTVRRLVFTSSAGTL 132 (338)
Q Consensus 77 -----------~~d~vi~~a~~~~~~--~------~~~~~~~~~~n~~~~~~l~~~~~~--~---~~~~~~v~~Ss~~v~ 132 (338)
++|++||+||..... . .+..+..+++|+.++..++++++. . ....+||++||....
T Consensus 554 ~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~ 633 (1688)
T 2pff_A 554 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT 633 (1688)
T ss_dssp HSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTT
T ss_pred HHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhc
Confidence 489999999964322 1 122357889999999998887722 1 113589999996443
Q ss_pred eccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHH-HHHHHHHcC--ccEEEEcCCceeCCCCCCCCChhHHHh
Q 040253 133 DVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQA-AWKFAEENN--IDFISIIPSLVVGPFLTSSMPPSLITA 209 (338)
Q Consensus 133 ~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~-~~~~~~~~~--~~~~ilRp~~v~G~~~~~~~~~~~~~~ 209 (338)
. . ....|+.+|...+.+ .+.++++.+ ++++.+.||.+.|....... . .
T Consensus 634 ~--G----------------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~-e----~ 684 (1688)
T 2pff_A 634 F--G----------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN-N----I 684 (1688)
T ss_dssp S--S----------------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT-T----T
T ss_pred c--C----------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc-h----H
Confidence 2 0 123799999999998 444444333 88888999988753221110 0 0
Q ss_pred hhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCC
Q 040253 210 LSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHP 245 (338)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 245 (338)
....... . .......+|+|++++.++...
T Consensus 685 ~~~~l~~---i----plR~~sPEEVA~aIlFLaSd~ 713 (1688)
T 2pff_A 685 IAEGIEK---M----GVRTFSQKEMAFNLLGLLTPE 713 (1688)
T ss_dssp CSTTTSS---S----SCCCCCCCTTHHHHHHHTSTT
T ss_pred HHHHHHh---C----CCCCCCHHHHHHHHHHHhCCC
Confidence 0000000 0 023458899999999998765
No 306
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*
Probab=99.54 E-value=7e-14 Score=143.70 Aligned_cols=207 Identities=15% Similarity=0.108 Sum_probs=140.0
Q ss_pred CCCcEEEEeCCchh-hHHHHHHHHHHCCCeEEEEE-cCCCcHHHH-HHHhc-CCCCCCcEEEEecccCCCCCchhhhC--
Q 040253 3 SIAETVCVTGASGF-IGSWLIMRLLERGYAVRATV-RDPDNKKKV-KHLLE-LPKASTHLTLWKADLAEEGNFDEPIR-- 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~-~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-- 76 (338)
..++++|||||+|. ||.+++++|++.|++|++++ |+....... +.+.. ......++.++.+|++|.+++.++++
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i 752 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFI 752 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHH
Confidence 34689999999998 99999999999999999984 555443322 22211 11112578999999999988876552
Q ss_pred -----------CccEEEEecccCCCC------C--CCccchhhhhhhHHHHHHHHHHHhCC-----CccEEEEecCceee
Q 040253 77 -----------GCTGVFHLATPMDFE------S--KDPENEVIRPTINGMVSIMRACKNAK-----TVRRLVFTSSAGTL 132 (338)
Q Consensus 77 -----------~~d~vi~~a~~~~~~------~--~~~~~~~~~~n~~~~~~l~~~~~~~~-----~~~~~v~~Ss~~v~ 132 (338)
++|++||+||..... . .+..+..+.+|+.++..++++++... ...+||++||...+
T Consensus 753 ~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~ 832 (1887)
T 2uv8_A 753 YDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT 832 (1887)
T ss_dssp HSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTC
T ss_pred HHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhc
Confidence 589999999965422 1 12235788999999999988873222 13589999997544
Q ss_pred eccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHH-HHHHHHHcC--ccEEEEcCCceeCCCCCCCCChhHHHh
Q 040253 133 DVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQA-AWKFAEENN--IDFISIIPSLVVGPFLTSSMPPSLITA 209 (338)
Q Consensus 133 ~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~-~~~~~~~~~--~~~~ilRp~~v~G~~~~~~~~~~~~~~ 209 (338)
. . ....|+.+|...+.+ .+.++++++ ++++++.||.+.|........ .....
T Consensus 833 ~--g----------------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~-~~~~~ 887 (1887)
T 2uv8_A 833 F--G----------------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANN-IIAEG 887 (1887)
T ss_dssp S--S----------------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CC-TTHHH
T ss_pred c--C----------------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccch-hHHHH
Confidence 2 0 123799999999998 666666543 999999999998532111100 01111
Q ss_pred hhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCC
Q 040253 210 LSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHP 245 (338)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 245 (338)
.. ..+ ..+...+|+|+++++++...
T Consensus 888 ~~---~~p--------lr~~sPEEVA~avlfLaSd~ 912 (1887)
T 2uv8_A 888 IE---KMG--------VRTFSQKEMAFNLLGLLTPE 912 (1887)
T ss_dssp HH---TTS--------CCCEEHHHHHHHHHGGGSHH
T ss_pred HH---hcC--------CCCCCHHHHHHHHHHHhCCC
Confidence 11 100 14558999999999998754
No 307
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=99.48 E-value=4.1e-13 Score=118.86 Aligned_cols=170 Identities=12% Similarity=-0.071 Sum_probs=117.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHH-CCCeEEEEEcCCCcHH------------HHHH-HhcCCCCCCcEEEEecccCCCC
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLE-RGYAVRATVRDPDNKK------------KVKH-LLELPKASTHLTLWKADLAEEG 69 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~------------~~~~-~~~~~~~~~~~~~~~~Dl~d~~ 69 (338)
.+|++|||||++-||.++++.|++ .|.+|.+++|+.+... .... +... ...+..+.+|++|.+
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~---G~~a~~i~~Dvtd~~ 122 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK---GLYAKSINGDAFSDE 122 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT---TCCEEEEESCTTSHH
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc---CCceEEEECCCCCHH
Confidence 368999999999999999999999 9999999998654321 1121 1111 146788999999998
Q ss_pred CchhhhC-------CccEEEEecccC-------------CC--------------------------CCCCccchhhhhh
Q 040253 70 NFDEPIR-------GCTGVFHLATPM-------------DF--------------------------ESKDPENEVIRPT 103 (338)
Q Consensus 70 ~~~~~~~-------~~d~vi~~a~~~-------------~~--------------------------~~~~~~~~~~~~n 103 (338)
++.++++ ++|++||+||.. .. ...+..+..+++|
T Consensus 123 ~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn 202 (405)
T 3zu3_A 123 IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVM 202 (405)
T ss_dssp HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhh
Confidence 8777653 699999999863 00 0111233456667
Q ss_pred hHHHH-HHHHHHHhCC---CccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHH
Q 040253 104 INGMV-SIMRACKNAK---TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAE 179 (338)
Q Consensus 104 ~~~~~-~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~ 179 (338)
..+.. .+++++.... .-.++|++||..... .. +......|+.+|...+.+.+.++.
T Consensus 203 ~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~--~~------------------p~~~~~aY~AaKaal~~ltrsLA~ 262 (405)
T 3zu3_A 203 GGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKI--TH------------------DIYWNGSIGAAKKDLDQKVLAIRE 262 (405)
T ss_dssp SSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGG--GT------------------TTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhC--cC------------------CCccchHHHHHHHHHHHHHHHHHH
Confidence 66654 4455443211 125899999965432 00 001125899999999999999887
Q ss_pred Hc----CccEEEEcCCceeCC
Q 040253 180 EN----NIDFISIIPSLVVGP 196 (338)
Q Consensus 180 ~~----~~~~~ilRp~~v~G~ 196 (338)
++ |+++.++-||.+--+
T Consensus 263 Ela~~~GIRVNaVaPG~i~T~ 283 (405)
T 3zu3_A 263 SLAAHGGGDARVSVLKAVVSQ 283 (405)
T ss_dssp HHHTTTSCEEEEEECCCCCCH
T ss_pred HhCcccCeEEEEEEeCCCcCc
Confidence 74 899999999988654
No 308
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*
Probab=99.48 E-value=2.7e-13 Score=139.15 Aligned_cols=208 Identities=12% Similarity=0.083 Sum_probs=137.6
Q ss_pred CCCCcEEEEeCCchh-hHHHHHHHHHHCCCeEEEEEc-CCCcHHHH-HHHh-cCCCCCCcEEEEecccCCCCCchhhhC-
Q 040253 2 GSIAETVCVTGASGF-IGSWLIMRLLERGYAVRATVR-DPDNKKKV-KHLL-ELPKASTHLTLWKADLAEEGNFDEPIR- 76 (338)
Q Consensus 2 ~~~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~-~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~- 76 (338)
...++++|||||+|. ||.+++++|++.|++|+++++ +....... +.+. .......++.++.+|++|.+++.++++
T Consensus 649 ~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~ 728 (1878)
T 2uv9_A 649 TFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNY 728 (1878)
T ss_dssp CCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHH
Confidence 344689999999999 999999999999999999864 44333221 2221 111112578999999999988877652
Q ss_pred ----------CccEEEEecccCCCC---CC-----CccchhhhhhhHHHHHHHHHHHh--C---CCccEEEEecCceeee
Q 040253 77 ----------GCTGVFHLATPMDFE---SK-----DPENEVIRPTINGMVSIMRACKN--A---KTVRRLVFTSSAGTLD 133 (338)
Q Consensus 77 ----------~~d~vi~~a~~~~~~---~~-----~~~~~~~~~n~~~~~~l~~~~~~--~---~~~~~~v~~Ss~~v~~ 133 (338)
++|+|||+||..... .. +..+..+.+|+.++.+++++++. . ....+||++||...+.
T Consensus 729 i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~ 808 (1878)
T 2uv9_A 729 IYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTF 808 (1878)
T ss_dssp HHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSS
T ss_pred HHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhcc
Confidence 589999999965322 11 22357889999999888776321 1 1136899999975442
Q ss_pred ccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH-c--CccEEEEcCCceeCCCCCCCCChhHHHhh
Q 040253 134 VEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE-N--NIDFISIIPSLVVGPFLTSSMPPSLITAL 210 (338)
Q Consensus 134 ~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~-~--~~~~~ilRp~~v~G~~~~~~~~~~~~~~~ 210 (338)
. ....|+.+|...+.+++.++.+ . +++++++.||.+-|... .... ....
T Consensus 809 --g----------------------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m---~~~~-~~~~ 860 (1878)
T 2uv9_A 809 --G----------------------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGL---MSAN-NLVA 860 (1878)
T ss_dssp --S----------------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTS---CSHH-HHTH
T ss_pred --C----------------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcc---cccc-hhhH
Confidence 1 1237999999999987766544 2 39999999998863221 1110 0000
Q ss_pred hhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCC
Q 040253 211 SPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHP 245 (338)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~ 245 (338)
......+ ......+|+|++++.++...
T Consensus 861 ~~~~~~p--------lr~~sPeEVA~avlfLaSd~ 887 (1878)
T 2uv9_A 861 EGVEKLG--------VRTFSQQEMAFNLLGLMAPA 887 (1878)
T ss_dssp HHHHTTT--------CCCBCHHHHHHHHHHHHSHH
T ss_pred HHHHhcC--------CCCCCHHHHHHHHHHHhCCc
Confidence 0001111 13458999999999988653
No 309
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=99.45 E-value=4e-13 Score=127.43 Aligned_cols=218 Identities=18% Similarity=0.125 Sum_probs=142.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCC---------CcHHHHH-HHhcCCCCCCcEEEEecccCCCCCchh
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDP---------DNKKKVK-HLLELPKASTHLTLWKADLAEEGNFDE 73 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 73 (338)
.+|+++||||++-||.+++++|+++|++|++.+|+. +..+... .+.... ..+ ..|+.|.++..+
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g---~~~---~~d~~d~~~~~~ 80 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNG---GVA---VADYNNVLDGDK 80 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTT---CEE---EEECCCTTCHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcC---CeE---EEEcCCHHHHHH
Confidence 468899999999999999999999999999988754 3333222 221111 122 357777766554
Q ss_pred hh-------CCccEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCC
Q 040253 74 PI-------RGCTGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEH 137 (338)
Q Consensus 74 ~~-------~~~d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~ 137 (338)
++ .++|++||+||.... ...+..+..+++|+.++..+.+++. +.+ ..++|++||..... ..
T Consensus 81 ~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~--~~ 157 (604)
T 2et6_A 81 IVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLY--GN 157 (604)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHH--CC
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcC--CC
Confidence 43 379999999996431 1223345789999999988877663 333 46999999976542 10
Q ss_pred CCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcc
Q 040253 138 RKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPIT 214 (338)
Q Consensus 138 ~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~ 214 (338)
.....|+.+|.....+.+.++.+. |+++++|.|+ +. + .......
T Consensus 158 --------------------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~----T----~m~~~~~---- 204 (604)
T 2et6_A 158 --------------------FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-AR----S----RMTESIM---- 204 (604)
T ss_dssp --------------------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CC----C----HHHHTTS----
T ss_pred --------------------CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-Cc----C----ccccccC----
Confidence 124589999999999999998874 8999999995 21 1 0000000
Q ss_pred cCCCCCCCCCCCccccHHHHHHHHHHhhcCCCC--CCceEEec-------------------CCCCHHHHHHHHHHh
Q 040253 215 RNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPNA--KGRYICSS-------------------HPATILELAKFLREK 270 (338)
Q Consensus 215 ~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~--~~~~~~~~-------------------~~~t~~e~~~~i~~~ 270 (338)
. ....+....+|++.++++++..... +..+.+.+ ...+..++.+.+.+.
T Consensus 205 --~-----~~~~~~~~pe~vA~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 274 (604)
T 2et6_A 205 --P-----PPMLEKLGPEKVAPLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEI 274 (604)
T ss_dssp --C-----HHHHTTCSHHHHHHHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHH
T ss_pred --C-----hhhhccCCHHHHHHHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHh
Confidence 0 0001235789999999998865421 22333321 335778888777654
No 310
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Probab=99.45 E-value=4.4e-13 Score=127.18 Aligned_cols=194 Identities=17% Similarity=0.126 Sum_probs=131.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEeccc-CCCCCchh----hhCCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADL-AEEGNFDE----PIRGC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-~d~~~~~~----~~~~~ 78 (338)
.+|+++||||++-||..++++|+++|++|++.+|... ....+.+... ..++..+.+|+ .+.+.+.+ .+.++
T Consensus 321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~-~~~~~~i~~~---g~~~~~~~~Dv~~~~~~~~~~~~~~~G~i 396 (604)
T 2et6_A 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDA-TKTVDEIKAA---GGEAWPDQHDVAKDSEAIIKNVIDKYGTI 396 (604)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC-HHHHHHHHHT---TCEEEEECCCHHHHHHHHHHHHHHHHSCC
T ss_pred CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccH-HHHHHHHHhc---CCeEEEEEcChHHHHHHHHHHHHHhcCCC
Confidence 3588999999999999999999999999999876432 1212222221 14567788888 55443222 23479
Q ss_pred cEEEEecccCCC-----CCCCccchhhhhhhHHHHHHHHHHH----hCCCccEEEEecCceeeeccCCCCCCcCCCCCCc
Q 040253 79 TGVFHLATPMDF-----ESKDPENEVIRPTINGMVSIMRACK----NAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSD 149 (338)
Q Consensus 79 d~vi~~a~~~~~-----~~~~~~~~~~~~n~~~~~~l~~~~~----~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~ 149 (338)
|++||+||.... ...+..+..+++|+.++..+.+++. +.+ ..++|++||..... .
T Consensus 397 DiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~--~------------- 460 (604)
T 2et6_A 397 DILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIY--G------------- 460 (604)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHS--C-------------
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhcc--C-------------
Confidence 999999996432 1223345789999999988887763 333 46999999976542 1
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHHHHHHHc---CccEEEEcCCceeCCCCCCCCChhHHHhhhhcccCCCCCCCCCCC
Q 040253 150 LDFVRSVKMTGWMYFVSKTLAEQAAWKFAEEN---NIDFISIIPSLVVGPFLTSSMPPSLITALSPITRNEAHYPIIKQG 226 (338)
Q Consensus 150 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (338)
......|+.||.....+.+.++.+. |+++++|.||. . + .+.... . ... ..
T Consensus 461 -------~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~--~---T-~m~~~~---~----~~~-------~~ 513 (604)
T 2et6_A 461 -------NFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA--E---T-AMTLSI---M----REQ-------DK 513 (604)
T ss_dssp -------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC--C---C-CC-----------------------C
T ss_pred -------CCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC--C---C-cccccc---C----chh-------hc
Confidence 0124589999999999999988874 89999999972 1 1 111100 0 000 02
Q ss_pred ccccHHHHHHHHHHhhcC
Q 040253 227 QFVHLDDLCSAHIFLFEH 244 (338)
Q Consensus 227 ~~i~v~D~a~~~~~~l~~ 244 (338)
+....+|++.++++++..
T Consensus 514 ~~~~pe~vA~~v~~L~s~ 531 (604)
T 2et6_A 514 NLYHADQVAPLLVYLGTD 531 (604)
T ss_dssp CSSCGGGTHHHHHHTTST
T ss_pred cCCCHHHHHHHHHHHhCC
Confidence 345789999999998864
No 311
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=99.44 E-value=1.4e-13 Score=134.49 Aligned_cols=202 Identities=18% Similarity=0.183 Sum_probs=141.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHH-HCCC-eEEEEEcCCCc---HHHH-HHHhcCCCCCCcEEEEecccCCCCCchhhhC-
Q 040253 4 IAETVCVTGASGFIGSWLIMRLL-ERGY-AVRATVRDPDN---KKKV-KHLLELPKASTHLTLWKADLAEEGNFDEPIR- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~---~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~- 76 (338)
+.++++||||+|.||..++++|+ ++|. +|++++|+... .... +.+.. ...++.++.+|++|.+++.++++
T Consensus 529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~---~G~~v~~~~~Dvsd~~~v~~~~~~ 605 (795)
T 3slk_A 529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTA---YGAEVSLQACDVADRETLAKVLAS 605 (795)
T ss_dssp TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHH---TTCEEEEEECCTTCHHHHHHHHHT
T ss_pred cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHh---cCCcEEEEEeecCCHHHHHHHHHH
Confidence 46899999999999999999999 7897 59999997432 2222 22222 12578999999999998888764
Q ss_pred -----CccEEEEecccCCCC-----CCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCC
Q 040253 77 -----GCTGVFHLATPMDFE-----SKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETS 146 (338)
Q Consensus 77 -----~~d~vi~~a~~~~~~-----~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~ 146 (338)
.+|+|||+|+..... ..+..+..++.|+.++.++.+++.. . . +||++||.+.+- .
T Consensus 606 ~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-~-l-~iV~~SS~ag~~--g---------- 670 (795)
T 3slk_A 606 IPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-D-V-ALVLFSSVSGVL--G---------- 670 (795)
T ss_dssp SCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT-T-S-EEEEEEETHHHH--T----------
T ss_pred HHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh-C-C-EEEEEccHHhcC--C----------
Confidence 479999999865421 2233456788999999999998832 2 3 899999976553 1
Q ss_pred CCchhhhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCCCCChhHHH-hhhhcccCCCCCCCCCC
Q 040253 147 WSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTSSMPPSLIT-ALSPITRNEAHYPIIKQ 225 (338)
Q Consensus 147 ~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 225 (338)
......|+.+|...+.+.+++.. .|++++.+-||.+-.++. ...... .........
T Consensus 671 ----------~~g~~~YaAaka~~~alA~~~~~-~Gi~v~sI~pG~v~t~g~----~~~~~~~~~~~~~~~g-------- 727 (795)
T 3slk_A 671 ----------SGGQGNYAAANSFLDALAQQRQS-RGLPTRSLAWGPWAEHGM----ASTLREAEQDRLARSG-------- 727 (795)
T ss_dssp ----------CSSCHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCCSCCCH----HHHHHHHHHHHHHHTT--------
T ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHH-cCCeEEEEECCeECcchh----hccccHHHHHHHHhcC--------
Confidence 12355899999988887776654 599999999987764431 111110 001011111
Q ss_pred CccccHHHHHHHHHHhhcCCC
Q 040253 226 GQFVHLDDLCSAHIFLFEHPN 246 (338)
Q Consensus 226 ~~~i~v~D~a~~~~~~l~~~~ 246 (338)
...+..++....+..++..+.
T Consensus 728 ~~~l~~~e~~~~~~~~l~~~~ 748 (795)
T 3slk_A 728 LLPISTEEGLSQFDAACGGAH 748 (795)
T ss_dssp BCCCCHHHHHHHHHHHHTSSC
T ss_pred CCCCCHHHHHHHHHHHHhCCC
Confidence 345778888888888887754
No 312
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=99.43 E-value=1.3e-12 Score=117.61 Aligned_cols=171 Identities=11% Similarity=-0.070 Sum_probs=114.1
Q ss_pred CCcEEEEeCCchhhHHH--HHHHHHHCCCeEEEEEcCCCc------------HHHHHHHhcCCCCCCcEEEEecccCCCC
Q 040253 4 IAETVCVTGASGFIGSW--LIMRLLERGYAVRATVRDPDN------------KKKVKHLLELPKASTHLTLWKADLAEEG 69 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~--l~~~L~~~g~~V~~~~r~~~~------------~~~~~~~~~~~~~~~~~~~~~~Dl~d~~ 69 (338)
.+|++|||||++-||.+ +++.|.+.|++|++++|+... ......+.... ...+..+.+|++|.+
T Consensus 59 ~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~Dvtd~~ 136 (418)
T 4eue_A 59 GPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK--GLVAKNFIEDAFSNE 136 (418)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT--TCCEEEEESCTTCHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc--CCcEEEEEeeCCCHH
Confidence 36899999999999999 999998889999999996543 12333222111 246889999999998
Q ss_pred CchhhhC-------CccEEEEecccC-------------CCC--------------------------CCCccchhhhhh
Q 040253 70 NFDEPIR-------GCTGVFHLATPM-------------DFE--------------------------SKDPENEVIRPT 103 (338)
Q Consensus 70 ~~~~~~~-------~~d~vi~~a~~~-------------~~~--------------------------~~~~~~~~~~~n 103 (338)
++.++++ ++|++||+||.. ... ..+..+..+++|
T Consensus 137 ~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn 216 (418)
T 4eue_A 137 TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVM 216 (418)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHh
Confidence 8777653 689999999863 000 011112334444
Q ss_pred hHHHH-HHHHHHHhCC---CccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHH
Q 040253 104 INGMV-SIMRACKNAK---TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAE 179 (338)
Q Consensus 104 ~~~~~-~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~ 179 (338)
..+.. .+++++.... ...++|++||....- .. +......|+.+|.+.+.+.+.++.
T Consensus 217 ~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~--~~------------------p~~~~~aY~ASKaAL~~ltrsLA~ 276 (418)
T 4eue_A 217 GGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPR--TY------------------KIYREGTIGIAKKDLEDKAKLINE 276 (418)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGG--GT------------------TTTTTSHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcC--CC------------------CccccHHHHHHHHHHHHHHHHHHH
Confidence 44333 4445443322 125799999864331 00 111125899999999998888886
Q ss_pred H----cCccEEEEcCCceeCC
Q 040253 180 E----NNIDFISIIPSLVVGP 196 (338)
Q Consensus 180 ~----~~~~~~ilRp~~v~G~ 196 (338)
+ +|++++++-||.+--+
T Consensus 277 ELa~~~GIrVN~V~PG~v~T~ 297 (418)
T 4eue_A 277 KLNRVIGGRAFVSVNKALVTK 297 (418)
T ss_dssp HHHHHHSCEEEEEECCCCCCH
T ss_pred HhCCccCeEEEEEECCcCcCh
Confidence 6 4799999999988654
No 313
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=99.42 E-value=6.1e-13 Score=118.81 Aligned_cols=171 Identities=15% Similarity=-0.074 Sum_probs=115.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHH-CCCeEEEEEcCCCcHHH------------H-HHHhcCCCCCCcEEEEecccCCCC
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLE-RGYAVRATVRDPDNKKK------------V-KHLLELPKASTHLTLWKADLAEEG 69 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~------------~-~~~~~~~~~~~~~~~~~~Dl~d~~ 69 (338)
.+|++|||||++-||.++++.|++ .|.+|++++|+.+.... . +.+... ...+..+.+|++|.+
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~---G~~a~~i~~Dvtd~~ 136 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA---GLYSKSINGDAFSDA 136 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT---TCCEEEEESCTTSHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc---CCcEEEEEecCCCHH
Confidence 368999999999999999999999 99999999987553221 1 111111 146788999999998
Q ss_pred Cchhhh--------CCccEEEEecccC-------------CCC--------------------------CCCccchhhhh
Q 040253 70 NFDEPI--------RGCTGVFHLATPM-------------DFE--------------------------SKDPENEVIRP 102 (338)
Q Consensus 70 ~~~~~~--------~~~d~vi~~a~~~-------------~~~--------------------------~~~~~~~~~~~ 102 (338)
++.+++ .++|++||+||.. ... ..+..+..+++
T Consensus 137 ~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~V 216 (422)
T 3s8m_A 137 ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITV 216 (422)
T ss_dssp HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHh
Confidence 776544 4689999999852 100 01112234445
Q ss_pred hhHHHH-HHHHHHHhCC---CccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHH
Q 040253 103 TINGMV-SIMRACKNAK---TVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFA 178 (338)
Q Consensus 103 n~~~~~-~l~~~~~~~~---~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~ 178 (338)
|..+.. .+++++.... ...++|++||....- . .+......|+.||...+.+.+.++
T Consensus 217 n~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~--~------------------~p~~~~~aY~ASKaAl~~lTrsLA 276 (422)
T 3s8m_A 217 MGGQDWELWIDALEGAGVLADGARSVAFSYIGTEI--T------------------WPIYWHGALGKAKVDLDRTAQRLN 276 (422)
T ss_dssp HSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGG--G------------------HHHHTSHHHHHHHHHHHHHHHHHH
T ss_pred hchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhc--c------------------CCCccchHHHHHHHHHHHHHHHHH
Confidence 555443 4555543321 125799999865431 0 011122589999999999999988
Q ss_pred HHc---CccEEEEcCCceeCCC
Q 040253 179 EEN---NIDFISIIPSLVVGPF 197 (338)
Q Consensus 179 ~~~---~~~~~ilRp~~v~G~~ 197 (338)
.++ |++++++.||.+--+.
T Consensus 277 ~Ela~~GIRVNaVaPG~i~T~~ 298 (422)
T 3s8m_A 277 ARLAKHGGGANVAVLKSVVTQA 298 (422)
T ss_dssp HHHHTTTCEEEEEEECCCCCTT
T ss_pred HHhCccCEEEEEEEcCCCcChh
Confidence 875 8999999999887554
No 314
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=99.37 E-value=5.1e-13 Score=117.49 Aligned_cols=177 Identities=11% Similarity=0.056 Sum_probs=117.5
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCC-------eEEEEEcC----CCcHHH-HHHHhcCCCCCCcEEEEecccCCC
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGY-------AVRATVRD----PDNKKK-VKHLLELPKASTHLTLWKADLAEE 68 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~ 68 (338)
|+.++|||+||||+||+|++++..|+..|. +|.+++++ .+.... ..++..... + + ..|+...
T Consensus 1 m~~~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~--~-~---~~~i~~~ 74 (329)
T 1b8p_A 1 MAKTPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAF--P-L---LAGMTAH 74 (329)
T ss_dssp --CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTC--T-T---EEEEEEE
T ss_pred CCCCCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcc--c-c---cCcEEEe
Confidence 655568999999999999999999998875 78888776 221211 112221100 1 1 2366666
Q ss_pred CCchhhhCCccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCC
Q 040253 69 GNFDEPIRGCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSW 147 (338)
Q Consensus 69 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~ 147 (338)
.++.++++++|+|||+|+.......+ ..++...|+..+.++++++.+.. +..+||++|...-.-. ....+..+
T Consensus 75 ~~~~~al~~aD~Vi~~ag~~~~~g~~-r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t-----~~~~~~~~ 148 (329)
T 1b8p_A 75 ADPMTAFKDADVALLVGARPRGPGME-RKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNA-----YIAMKSAP 148 (329)
T ss_dssp SSHHHHTTTCSEEEECCCCCCCTTCC-HHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHH-----HHHHHTCT
T ss_pred cCcHHHhCCCCEEEEeCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHH-----HHHHHHcC
Confidence 77888999999999999965433333 34788999999999999999873 4568999987421000 00000000
Q ss_pred CchhhhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCC
Q 040253 148 SDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPF 197 (338)
Q Consensus 148 ~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~ 197 (338)
--++...++.+++...++...+++..|++...++...++|..
T Consensus 149 --------~~p~~~v~g~t~Ld~~r~~~~la~~lgv~~~~v~~~~v~G~H 190 (329)
T 1b8p_A 149 --------SLPAKNFTAMLRLDHNRALSQIAAKTGKPVSSIEKLFVWGNH 190 (329)
T ss_dssp --------TSCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEESCEEEBCS
T ss_pred --------CCCHHHEEEeecHHHHHHHHHHHHHhCcCHHHceEEEEEecc
Confidence 001233578888888888888888888877777777788854
No 315
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=99.35 E-value=2.1e-12 Score=95.97 Aligned_cols=96 Identities=21% Similarity=0.249 Sum_probs=77.7
Q ss_pred CCCCcEEEEeCCchhhHHHHHHHHHHCC-CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 2 GSIAETVCVTGASGFIGSWLIMRLLERG-YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 2 ~~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
..++++|+|+|+ |++|+++++.|.+.| ++|++++|+++....+.. .++..+.+|+.+.+.+.++++++|+
T Consensus 2 ~~~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~--------~~~~~~~~d~~~~~~~~~~~~~~d~ 72 (118)
T 3ic5_A 2 NAMRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR--------MGVATKQVDAKDEAGLAKALGGFDA 72 (118)
T ss_dssp CTTCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT--------TTCEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCCcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh--------CCCcEEEecCCCHHHHHHHHcCCCE
Confidence 345789999999 999999999999999 999999998765544431 4678899999999999999999999
Q ss_pred EEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEE
Q 040253 81 VFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLV 124 (338)
Q Consensus 81 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v 124 (338)
|||+++. . ....+++++.+.+ +++|.
T Consensus 73 vi~~~~~----------~-------~~~~~~~~~~~~g-~~~~~ 98 (118)
T 3ic5_A 73 VISAAPF----------F-------LTPIIAKAAKAAG-AHYFD 98 (118)
T ss_dssp EEECSCG----------G-------GHHHHHHHHHHTT-CEEEC
T ss_pred EEECCCc----------h-------hhHHHHHHHHHhC-CCEEE
Confidence 9999852 1 1357888888888 65554
No 316
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=99.19 E-value=5.9e-11 Score=128.07 Aligned_cols=169 Identities=17% Similarity=0.127 Sum_probs=118.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCe-EEEEEcCCCcHHHHHHH-hcCCCCCCcEEEEecccCCCCCchhhhC-----
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYA-VRATVRDPDNKKKVKHL-LELPKASTHLTLWKADLAEEGNFDEPIR----- 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~----- 76 (338)
..++++||||+|-||..+++.|+++|.+ |++++|+....+..... ..+.....++..+.+|++|.+++.++++
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~ 1962 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQL 1962 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhc
Confidence 3678999999999999999999999986 77888876543221111 1111112578899999999988877653
Q ss_pred -CccEEEEecccCC-----CCCCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCceeeeccCCCCCCcCCCCCCc
Q 040253 77 -GCTGVFHLATPMD-----FESKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAGTLDVEEHRKPVYDETSWSD 149 (338)
Q Consensus 77 -~~d~vi~~a~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~ 149 (338)
.+|+|||+|+... ....+..+..++.|+.++.++.+++...- ...+||++||.+..- .
T Consensus 1963 g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~--g------------- 2027 (2512)
T 2vz8_A 1963 GPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGR--G------------- 2027 (2512)
T ss_dssp SCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHT--T-------------
T ss_pred CCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcC--C-------------
Confidence 6899999998543 22334456789999999999988776431 146899999976542 1
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeC
Q 040253 150 LDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVG 195 (338)
Q Consensus 150 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G 195 (338)
......|+.+|...+.+.+.... .|++...+-.+.+-+
T Consensus 2028 -------~~g~~~Y~aaKaal~~l~~~rr~-~Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2028 -------NAGQANYGFANSAMERICEKRRH-DGLPGLAVQWGAIGD 2065 (2512)
T ss_dssp -------CTTCHHHHHHHHHHHHHHHHHHH-TTSCCCEEEECCBCT
T ss_pred -------CCCcHHHHHHHHHHHHHHHHHHH-CCCcEEEEEccCcCC
Confidence 01345899999999998886554 499988888776543
No 317
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=99.18 E-value=1.1e-10 Score=102.20 Aligned_cols=117 Identities=11% Similarity=0.048 Sum_probs=81.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCC--CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERG--YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGV 81 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 81 (338)
++|||+||||+||+|+.++..|+.+| ++|.++++++. ......+..... ...+.. +.+.+++.++++++|+|
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~~~~~dL~~~~~-~~~v~~----~~~t~d~~~al~gaDvV 80 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-PGVTADISHMDT-GAVVRG----FLGQQQLEAALTGMDLI 80 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-HHHHHHHHTSCS-SCEEEE----EESHHHHHHHHTTCSEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-HhHHHHhhcccc-cceEEE----EeCCCCHHHHcCCCCEE
Confidence 46899999999999999999999988 78999888765 222222222110 012222 22234567789999999
Q ss_pred EEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 82 FHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 82 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
||+|+........ ..++...|+..+.++++++.+.+ .+.+|+++|
T Consensus 81 i~~ag~~~~~g~~-r~dl~~~N~~~~~~i~~~i~~~~-p~~~viv~S 125 (326)
T 1smk_A 81 IVPAGVPRKPGMT-RDDLFKINAGIVKTLCEGIAKCC-PRAIVNLIS 125 (326)
T ss_dssp EECCCCCCCSSCC-CSHHHHHHHHHHHHHHHHHHHHC-TTSEEEECC
T ss_pred EEcCCcCCCCCCC-HHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEEC
Confidence 9999865432222 24778999999999999999988 555666665
No 318
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=99.10 E-value=1.6e-09 Score=117.17 Aligned_cols=229 Identities=16% Similarity=0.137 Sum_probs=142.2
Q ss_pred CCcEEEEeCCchh-hHHHHHHHHHHCCCeEEEEEcCCCc-----HHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh--
Q 040253 4 IAETVCVTGASGF-IGSWLIMRLLERGYAVRATVRDPDN-----KKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI-- 75 (338)
Q Consensus 4 ~~~~ilVtGatG~-iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-- 75 (338)
.+|+++||||++- ||.++++.|++.|.+|++.+|+.+. ...+..... ....++..+.+|++|.+++.+++
T Consensus 2135 ~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~--~~G~~~~~v~~Dvtd~~~v~~lv~~ 2212 (3089)
T 3zen_D 2135 XDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHA--RFDATLWVVPANMASYSDIDKLVEW 2212 (3089)
T ss_dssp CCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHC--CTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHh--hcCCeEEEEEecCCCHHHHHHHHHH
Confidence 4689999999999 9999999999999999999998765 222222221 11246788999999998876653
Q ss_pred ---------CCccEEEEeccc----CCC------CCCCccchh----hhhhhHHHHHHHHHHHh----CC--CccEEEEe
Q 040253 76 ---------RGCTGVFHLATP----MDF------ESKDPENEV----IRPTINGMVSIMRACKN----AK--TVRRLVFT 126 (338)
Q Consensus 76 ---------~~~d~vi~~a~~----~~~------~~~~~~~~~----~~~n~~~~~~l~~~~~~----~~--~~~~~v~~ 126 (338)
.++|++||+||. ... ...+..+.. +++|+.++..++.++.. .+ ....++..
T Consensus 2213 i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~ 2292 (3089)
T 3zen_D 2213 VGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLP 2292 (3089)
T ss_dssp HTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEE
T ss_pred HHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEE
Confidence 258999999996 111 011122222 77888888877766543 22 01122222
Q ss_pred cCceeeeccCCCCCCcCCCCCCchhhhhhccCCCchHHHHHHHHHHHHHHHHHH--c--CccEEEEcCCceeCCCCCCCC
Q 040253 127 SSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMYFVSKTLAEQAAWKFAEE--N--NIDFISIIPSLVVGPFLTSSM 202 (338)
Q Consensus 127 Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~--~--~~~~~ilRp~~v~G~~~~~~~ 202 (338)
+|. ..+ .+ .....|+.||.+.+.+.+.++.+ . +++++.+.||.+-+.......
T Consensus 2293 ~ss-~~g-------~~---------------g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~ 2349 (3089)
T 3zen_D 2293 GSP-NRG-------MF---------------GGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQN 2349 (3089)
T ss_dssp ECS-STT-------SC---------------SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTT
T ss_pred CCc-ccc-------cC---------------CCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccc
Confidence 211 110 00 01237999999999999999998 3 688999999988754322111
Q ss_pred ChhHHHhhhhcccCCCCCCCCCCCccccHHHHHHHHHHhhcCCCC----CC-ce-EE-ec--C-CCCHHHHHHHHHH
Q 040253 203 PPSLITALSPITRNEAHYPIIKQGQFVHLDDLCSAHIFLFEHPNA----KG-RY-IC-SS--H-PATILELAKFLRE 269 (338)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~l~~~~~----~~-~~-~~-~~--~-~~t~~e~~~~i~~ 269 (338)
.. ...... ..+ ......+|+|.+++.++..... +. ++ .+ ++ . ...+.++.+.+++
T Consensus 2350 ~~-~~~~~~---~~~--------~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D 2350 DA-IVSAVE---EAG--------VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp TT-THHHHG---GGS--------CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred hh-HHHHHH---hcC--------CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence 11 111111 100 1233889999999998864321 11 22 22 22 2 3688888876543
No 319
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=99.02 E-value=7.8e-10 Score=95.92 Aligned_cols=168 Identities=13% Similarity=0.055 Sum_probs=97.5
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEc--CCCcHHH-HHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGY--AVRATVR--DPDNKKK-VKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
|||+||||+|++|++++..|+..|. ++..+++ +.+..+. ..++........++++... + .++++++|+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~~------~-~~a~~~aDv 73 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQG------G-YEDTAGSDV 73 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEEC------C-GGGGTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEeC------C-HHHhCCCCE
Confidence 5899999999999999999998875 5777766 4322111 1111110000122333321 1 456889999
Q ss_pred EEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhccCCC
Q 040253 81 VFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTG 160 (338)
Q Consensus 81 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~~~p~ 160 (338)
|||+|+........ ..+++..|+..+.++++++.+.+ ...+|+++|--+-- ......... .-++.
T Consensus 74 Vi~~ag~~~~~g~~-r~dl~~~N~~i~~~i~~~i~~~~-p~~~viv~SNPv~~---~~~~~~~~~----------~~p~~ 138 (303)
T 1o6z_A 74 VVITAGIPRQPGQT-RIDLAGDNAPIMEDIQSSLDEHN-DDYISLTTSNPVDL---LNRHLYEAG----------DRSRE 138 (303)
T ss_dssp EEECCCCCCCTTCC-HHHHHHHHHHHHHHHHHHHHTTC-SCCEEEECCSSHHH---HHHHHHHHS----------SSCGG
T ss_pred EEEcCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHHC-CCcEEEEeCChHHH---HHHHHHHHc----------CCCHH
Confidence 99999865433332 23678999999999999999998 55666666531100 000000000 01122
Q ss_pred chHHH-HHHHHHHHHHHHHHHcCccEEEEcCCceeCC
Q 040253 161 WMYFV-SKTLAEQAAWKFAEENNIDFISIIPSLVVGP 196 (338)
Q Consensus 161 ~~Y~~-sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~ 196 (338)
...|. +-+..-++-..+++..|++..-++ ..++|.
T Consensus 139 rviG~gt~Ld~~r~~~~la~~l~v~~~~v~-~~v~G~ 174 (303)
T 1o6z_A 139 QVIGFGGRLDSARFRYVLSEEFDAPVQNVE-GTILGE 174 (303)
T ss_dssp GEEECCHHHHHHHHHHHHHHHHTCCGGGEE-CCEEEC
T ss_pred HeeecccchhHHHHHHHHHHHhCcCHHHeE-EEEEeC
Confidence 34455 444445555555666677555555 667774
No 320
>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*
Probab=99.01 E-value=2.6e-09 Score=93.15 Aligned_cols=167 Identities=11% Similarity=0.045 Sum_probs=102.4
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEc--CCCcHHH----HHHHhcCCCCCCcEEEEecccCCC-CCchhhhC
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGY--AVRATVR--DPDNKKK----VKHLLELPKASTHLTLWKADLAEE-GNFDEPIR 76 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~d~-~~~~~~~~ 76 (338)
|||+||||+||+|++++..|+.+|. ++..+++ +...... +.+.. +....++ ++.+. +++.++++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~--~~~~~~~-----~i~~~~d~l~~al~ 73 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL--AGTRSDA-----NIYVESDENLRIID 73 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH--TTSCCCC-----EEEEEETTCGGGGT
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH--HhcCCCe-----EEEeCCcchHHHhC
Confidence 5899999999999999999998874 5777776 3321211 11111 1000112 23222 34678899
Q ss_pred CccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCcCCCCCCchhhhhhc
Q 040253 77 GCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSV 156 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~~e~~~~~~~~~~~~ 156 (338)
++|+|||+|+........ ...++..|+..+.++++++++++ ..+++.+|.. +.- .++-. .....
T Consensus 74 gaD~Vi~~Ag~~~~~g~~-r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~SNP-v~~--------~t~~~-----~k~~~ 137 (313)
T 1hye_A 74 ESDVVIITSGVPRKEGMS-RMDLAKTNAKIVGKYAKKIAEIC-DTKIFVITNP-VDV--------MTYKA-----LVDSK 137 (313)
T ss_dssp TCSEEEECCSCCCCTTCC-HHHHHHHHHHHHHHHHHHHHHHC-CCEEEECSSS-HHH--------HHHHH-----HHHHC
T ss_pred CCCEEEECCCCCCCCCCc-HHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecCc-HHH--------HHHHH-----HHhhC
Confidence 999999999965433333 24689999999999999999987 4445444432 110 00000 00001
Q ss_pred cCCCchHHH-HHHHHHHHHHHHHHHcCccEEEEcCCceeCC
Q 040253 157 KMTGWMYFV-SKTLAEQAAWKFAEENNIDFISIIPSLVVGP 196 (338)
Q Consensus 157 ~~p~~~Y~~-sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~ 196 (338)
.+|...+|. +.+...++...+++..|++..-++. .++|.
T Consensus 138 ~p~~rviG~gt~LD~~r~~~~la~~lgv~~~~v~~-~v~G~ 177 (313)
T 1hye_A 138 FERNQVFGLGTHLDSLRFKVAIAKFFGVHIDEVRT-RIIGE 177 (313)
T ss_dssp CCTTSEEECTTHHHHHHHHHHHHHHHTCCGGGEEC-CEEEC
T ss_pred cChhcEEEeCccHHHHHHHHHHHHHhCcCHHHeEE-EEeec
Confidence 124456777 7777777777777777876555554 55563
No 321
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=98.82 E-value=1.9e-09 Score=92.96 Aligned_cols=81 Identities=17% Similarity=0.187 Sum_probs=64.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
.+++++||||+|.+|+++++.|++.|++|++++|+.++...+....... .++.++.+|++|.+++.++++++|+|||
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~DvlVn 194 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR---FKVNVTAAETADDASRAEAVKGAHFVFT 194 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---HTCCCEEEECCSHHHHHHHTTTCSEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc---CCcEEEEecCCCHHHHHHHHHhCCEEEE
Confidence 4689999999999999999999999999999999866544443221100 1356778899999888888999999999
Q ss_pred eccc
Q 040253 84 LATP 87 (338)
Q Consensus 84 ~a~~ 87 (338)
+++.
T Consensus 195 ~ag~ 198 (287)
T 1lu9_A 195 AGAI 198 (287)
T ss_dssp CCCT
T ss_pred CCCc
Confidence 9974
No 322
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=98.82 E-value=4.8e-09 Score=80.44 Aligned_cols=103 Identities=16% Similarity=0.095 Sum_probs=72.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh-hCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP-IRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi 82 (338)
++++|+|+|+ |.+|+.+++.|.+.|++|++++|+++.... +.. .+...+.+|..+.+.+.++ +.++|+||
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~---~~~-----~~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNA---YAS-----YATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHT---TTT-----TCSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH---HHH-----hCCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 3568999997 999999999999999999999987543322 111 2346788999887766665 67899999
Q ss_pred EecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCcee
Q 040253 83 HLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGT 131 (338)
Q Consensus 83 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v 131 (338)
++++. + .+.| ..+.+.++..+ .++++..++...
T Consensus 76 ~~~~~-------~----~~~~----~~~~~~~~~~~-~~~ii~~~~~~~ 108 (144)
T 2hmt_A 76 VAIGA-------N----IQAS----TLTTLLLKELD-IPNIWVKAQNYY 108 (144)
T ss_dssp ECCCS-------C----HHHH----HHHHHHHHHTT-CSEEEEECCSHH
T ss_pred ECCCC-------c----hHHH----HHHHHHHHHcC-CCeEEEEeCCHH
Confidence 98863 1 1122 23556677777 567776665443
No 323
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=98.77 E-value=8.3e-09 Score=79.00 Aligned_cols=77 Identities=18% Similarity=0.187 Sum_probs=60.4
Q ss_pred CCC-CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh-hCCc
Q 040253 1 MGS-IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP-IRGC 78 (338)
Q Consensus 1 m~~-~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~ 78 (338)
|.. +|++|+|+|+ |++|+++++.|.+.|++|++++++++....+.. .++.++.+|.++++.+.++ +.++
T Consensus 1 m~~~~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~--------~~~~~~~gd~~~~~~l~~~~~~~~ 71 (141)
T 3llv_A 1 MTENGRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED--------EGFDAVIADPTDESFYRSLDLEGV 71 (141)
T ss_dssp -----CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEECCTTCHHHHHHSCCTTC
T ss_pred CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH--------CCCcEEECCCCCHHHHHhCCcccC
Confidence 443 3678999996 999999999999999999999998766554433 3578899999999887765 4589
Q ss_pred cEEEEecc
Q 040253 79 TGVFHLAT 86 (338)
Q Consensus 79 d~vi~~a~ 86 (338)
|+||.+.+
T Consensus 72 d~vi~~~~ 79 (141)
T 3llv_A 72 SAVLITGS 79 (141)
T ss_dssp SEEEECCS
T ss_pred CEEEEecC
Confidence 99997765
No 324
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=98.72 E-value=2.1e-08 Score=89.54 Aligned_cols=95 Identities=22% Similarity=0.192 Sum_probs=74.2
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
...|||+|+|| |++|+.+++.|.+ .++|.+.+|+.++.++.. +.+..+..|+.|.+++.++++++|+||
T Consensus 14 g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~---------~~~~~~~~d~~d~~~l~~~~~~~DvVi 82 (365)
T 3abi_A 14 GRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK---------EFATPLKVDASNFDKLVEVMKEFELVI 82 (365)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT---------TTSEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh---------ccCCcEEEecCCHHHHHHHHhCCCEEE
Confidence 34579999998 9999999998854 589999999866554432 356788999999999999999999999
Q ss_pred EecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEec
Q 040253 83 HLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTS 127 (338)
Q Consensus 83 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 127 (338)
+++++. + ...++++|.+.+ ++++=+|
T Consensus 83 ~~~p~~-----------~------~~~v~~~~~~~g--~~yvD~s 108 (365)
T 3abi_A 83 GALPGF-----------L------GFKSIKAAIKSK--VDMVDVS 108 (365)
T ss_dssp ECCCGG-----------G------HHHHHHHHHHHT--CEEEECC
T ss_pred EecCCc-----------c------cchHHHHHHhcC--cceEeee
Confidence 998631 1 246888898888 5777655
No 325
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=98.72 E-value=8.1e-08 Score=73.10 Aligned_cols=75 Identities=17% Similarity=0.169 Sum_probs=57.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh-hCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP-IRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi 82 (338)
..|+|+|+|+ |++|+.+++.|.+.|++|++++|+++....+... .++..+.+|..+.+.+.+. +.++|+||
T Consensus 3 ~~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~-------~~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 3 HGMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE-------IDALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-------CSSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh-------cCcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 3579999986 9999999999999999999999976554443321 1456788898877766544 67899999
Q ss_pred Eecc
Q 040253 83 HLAT 86 (338)
Q Consensus 83 ~~a~ 86 (338)
++..
T Consensus 75 ~~~~ 78 (140)
T 1lss_A 75 AVTG 78 (140)
T ss_dssp ECCS
T ss_pred EeeC
Confidence 9864
No 326
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=98.71 E-value=2.5e-07 Score=80.50 Aligned_cols=117 Identities=15% Similarity=0.149 Sum_probs=81.6
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCC--CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERG--YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
|||.|+||+|++|+.++..|+..| .+|.++++++ .......+.... ...++....+ .+++.++++++|+||+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-~~~~a~dL~~~~-~~~~l~~~~~----t~d~~~a~~~aDvVvi 74 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-TPGVAADLSHIE-TRATVKGYLG----PEQLPDCLKGCDVVVI 74 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-HHHHHHHHTTSS-SSCEEEEEES----GGGHHHHHTTCSEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-cHHHHHHHhccC-cCceEEEecC----CCCHHHHhCCCCEEEE
Confidence 589999999999999999999888 7899999987 222222232211 0011222211 1346678999999999
Q ss_pred ecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCc
Q 040253 84 LATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSA 129 (338)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~ 129 (338)
+++.......+. .++...|+..+..+++.+.+..+..++|++|..
T Consensus 75 ~ag~~~~~g~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sNP 119 (314)
T 1mld_A 75 PAGVPRKPGMTR-DDLFNTNATIVATLTAACAQHCPDAMICIISNP 119 (314)
T ss_dssp CCSCCCCTTCCG-GGGHHHHHHHHHHHHHHHHHHCTTSEEEECSSC
T ss_pred CCCcCCCCCCcH-HHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCC
Confidence 998655333333 367899999999999999887745688887653
No 327
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=98.67 E-value=2.7e-08 Score=89.83 Aligned_cols=101 Identities=17% Similarity=0.195 Sum_probs=74.8
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC---CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCC--cc
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG---YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRG--CT 79 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~d 79 (338)
|++|+|+|| |++|+.+++.|++.| .+|.+.+|+.++...+........ ..++..+.+|++|.+++.+++++ +|
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~~~D 78 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALINEVKPQ 78 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhhCCC
Confidence 479999998 999999999999988 389999998776655543221100 13578999999999999999886 99
Q ss_pred EEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEe
Q 040253 80 GVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFT 126 (338)
Q Consensus 80 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~ 126 (338)
+|||+++... ...++++|.+.+ + +++-+
T Consensus 79 vVin~ag~~~-----------------~~~v~~a~l~~g-~-~vvD~ 106 (405)
T 4ina_A 79 IVLNIALPYQ-----------------DLTIMEACLRTG-V-PYLDT 106 (405)
T ss_dssp EEEECSCGGG-----------------HHHHHHHHHHHT-C-CEEES
T ss_pred EEEECCCccc-----------------ChHHHHHHHHhC-C-CEEEe
Confidence 9999987411 145677787777 3 44433
No 328
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=98.64 E-value=4.8e-08 Score=85.44 Aligned_cols=118 Identities=11% Similarity=0.084 Sum_probs=79.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC--e-----EEEEEcCCC--cH-HHHHHHhcCCCCCCcEEEEecccCCCCCchhh
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY--A-----VRATVRDPD--NK-KKVKHLLELPKASTHLTLWKADLAEEGNFDEP 74 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~--~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 74 (338)
.+||+||||+|+||++++..|+..|. + +..+++++. .. ....++.... .+... ++.......+.
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~--~~~~~----~~~~~~~~~~~ 76 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCA--LPLLK----DVIATDKEEIA 76 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTC--CTTEE----EEEEESCHHHH
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhh--hcccC----CEEEcCCcHHH
Confidence 57999999999999999999988764 4 777777542 11 1111221100 01111 22223445677
Q ss_pred hCCccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCcc-EEEEecCc
Q 040253 75 IRGCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVR-RLVFTSSA 129 (338)
Q Consensus 75 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~Ss~ 129 (338)
++++|+||++||.......+. .++++.|+..+..+++++.+++... +++.+|..
T Consensus 77 ~~daDvVvitAg~prkpG~tR-~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsNP 131 (333)
T 5mdh_A 77 FKDLDVAILVGSMPRRDGMER-KDLLKANVKIFKCQGAALDKYAKKSVKVIVVGNP 131 (333)
T ss_dssp TTTCSEEEECCSCCCCTTCCT-TTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred hCCCCEEEEeCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCc
Confidence 889999999998654333333 3779999999999999999988333 68877763
No 329
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=98.61 E-value=2.9e-08 Score=90.69 Aligned_cols=105 Identities=22% Similarity=0.261 Sum_probs=74.4
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
+++|+|+| +|++|+++++.|++.|++|++++|+.++...+ .. ..+++..+.+|+.|.+++.++++++|+|||+
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~l---a~---~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~ 75 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKL---SA---GVQHSTPISLDVNDDAALDAEVAKHDLVISL 75 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHT---TT---TCTTEEEEECCTTCHHHHHHHHTTSSEEEEC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHH---HH---hcCCceEEEeecCCHHHHHHHHcCCcEEEEC
Confidence 57999998 89999999999999999999999975443322 11 1134778899999988888889999999999
Q ss_pred cccCCCCCCCccchhhh--hh-------hHHHHHHHHHHHhCC
Q 040253 85 ATPMDFESKDPENEVIR--PT-------INGMVSIMRACKNAK 118 (338)
Q Consensus 85 a~~~~~~~~~~~~~~~~--~n-------~~~~~~l~~~~~~~~ 118 (338)
++...... .....++ .| ......+++++++.+
T Consensus 76 a~~~~~~~--i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aG 116 (450)
T 1ff9_A 76 IPYTFHAT--VIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAG 116 (450)
T ss_dssp CC--CHHH--HHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTT
T ss_pred CccccchH--HHHHHHhCCCeEEEeecccHHHHHHHHHHHHCC
Confidence 97532100 0001111 11 235678889999888
No 330
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=98.53 E-value=2.1e-07 Score=72.11 Aligned_cols=76 Identities=20% Similarity=0.350 Sum_probs=60.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCC-CcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh-hCCccEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDP-DNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP-IRGCTGVF 82 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi 82 (338)
.++|+|+|+ |.+|+++++.|.+.|++|+++++++ +..+.+..... .++.++.+|.+|++.+.++ ++++|+||
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a~i~~ad~vi 76 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-----DNADVIPGDSNDSSVLKKAGIDRCRAIL 76 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-----TTCEEEESCTTSHHHHHHHTTTTCSEEE
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-----CCCeEEEcCCCCHHHHHHcChhhCCEEE
Confidence 468999985 9999999999999999999999975 32333332211 3678999999999888876 78999999
Q ss_pred Eecc
Q 040253 83 HLAT 86 (338)
Q Consensus 83 ~~a~ 86 (338)
.+.+
T Consensus 77 ~~~~ 80 (153)
T 1id1_A 77 ALSD 80 (153)
T ss_dssp ECSS
T ss_pred EecC
Confidence 7765
No 331
>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A
Probab=98.52 E-value=5.1e-07 Score=79.31 Aligned_cols=82 Identities=11% Similarity=-0.023 Sum_probs=61.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHH-HCCCeEEEEEcCCCcHH------------HHHHHhcCCCCCCcEEEEecccCCCCCc
Q 040253 5 AETVCVTGASGFIGSWLIMRLL-ERGYAVRATVRDPDNKK------------KVKHLLELPKASTHLTLWKADLAEEGNF 71 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~------------~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 71 (338)
+|++|||||+.-+|.+.+..|+ ..|..|+++.+..+..+ ....... ........+.+|+.|.+.+
T Consensus 50 pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~--~~G~~a~~i~~Dv~d~e~i 127 (401)
T 4ggo_A 50 PKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAK--REGLYSVTIDGDAFSDEIK 127 (401)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH--HHTCCEEEEESCTTSHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHH--HcCCCceeEeCCCCCHHHH
Confidence 6899999999999999999998 56899999988543221 1111100 0124678999999999887
Q ss_pred hhhhC-------CccEEEEecccC
Q 040253 72 DEPIR-------GCTGVFHLATPM 88 (338)
Q Consensus 72 ~~~~~-------~~d~vi~~a~~~ 88 (338)
.++++ ++|++||.+|..
T Consensus 128 ~~vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 128 AQVIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHHHTTCCEEEEEECCCCS
T ss_pred HHHHHHHHHhcCCCCEEEEecccc
Confidence 77663 799999999854
No 332
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=98.48 E-value=1.4e-06 Score=75.93 Aligned_cols=119 Identities=14% Similarity=0.126 Sum_probs=80.4
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHHH-HHHhc-CCCCCCcEEEEecccCCCCCchhhhC
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKKV-KHLLE-LPKASTHLTLWKADLAEEGNFDEPIR 76 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~ 76 (338)
|+..++||.|+|+ |.+|+.++..|+..|. +|.+++++.+..+.. .++.. .+....++.....| .++++
T Consensus 1 m~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~-------~~a~~ 72 (326)
T 3pqe_A 1 MNKHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT-------YEDCK 72 (326)
T ss_dssp -CCSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC-------GGGGT
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc-------HHHhC
Confidence 6666789999995 9999999999999886 899999876543331 11111 11111233433322 25678
Q ss_pred CccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 77 GCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 77 ~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
++|+||.++|.......+ -.+++..|+.....+.+.+.+..+...++.+|.
T Consensus 73 ~aDvVvi~ag~p~kpG~~-R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 73 DADIVCICAGANQKPGET-RLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp TCSEEEECCSCCCCTTCC-HHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCEEEEecccCCCCCcc-HHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 999999999854332222 236789999999999999988874556776664
No 333
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.44 E-value=1.4e-07 Score=86.37 Aligned_cols=76 Identities=17% Similarity=0.249 Sum_probs=62.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHC-CCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLER-GYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
.+++|+|+|+ |++|+.+++.|++. |++|++++|+.++...+... .++..+.+|+.|.+++.++++++|+||
T Consensus 22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~-------~~~~~~~~D~~d~~~l~~~l~~~DvVI 93 (467)
T 2axq_A 22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP-------SGSKAISLDVTDDSALDKVLADNDVVI 93 (467)
T ss_dssp -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG-------GTCEEEECCTTCHHHHHHHHHTSSEEE
T ss_pred CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh-------cCCcEEEEecCCHHHHHHHHcCCCEEE
Confidence 4689999997 99999999999998 78999999986655444321 245777899999888888889999999
Q ss_pred Eeccc
Q 040253 83 HLATP 87 (338)
Q Consensus 83 ~~a~~ 87 (338)
|+++.
T Consensus 94 n~tp~ 98 (467)
T 2axq_A 94 SLIPY 98 (467)
T ss_dssp ECSCG
T ss_pred ECCch
Confidence 99874
No 334
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=98.44 E-value=1e-06 Score=68.39 Aligned_cols=75 Identities=16% Similarity=0.143 Sum_probs=57.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh-hCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP-IRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi 82 (338)
..++|+|+|+ |.+|+.+++.|.+.|++|++++|+++....+.. ..++..+.+|..+.+.+.++ +.++|+||
T Consensus 18 ~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-------~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 18 KSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-------EFSGFTVVGDAAEFETLKECGMEKADMVF 89 (155)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-------TCCSEEEESCTTSHHHHHTTTGGGCSEEE
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-------cCCCcEEEecCCCHHHHHHcCcccCCEEE
Confidence 3579999985 999999999999999999999998765433210 03456778888776666554 67899999
Q ss_pred Eecc
Q 040253 83 HLAT 86 (338)
Q Consensus 83 ~~a~ 86 (338)
.+.+
T Consensus 90 ~~~~ 93 (155)
T 2g1u_A 90 AFTN 93 (155)
T ss_dssp ECSS
T ss_pred EEeC
Confidence 8875
No 335
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=98.40 E-value=2.7e-07 Score=75.69 Aligned_cols=75 Identities=20% Similarity=0.307 Sum_probs=52.8
Q ss_pred CCcEEEEeCC----------------chhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCC
Q 040253 4 IAETVCVTGA----------------SGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAE 67 (338)
Q Consensus 4 ~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 67 (338)
.+|+|||||| ||.+|.++++.|+++|++|+++.|....... .+ .++..+. +.+
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~------~~---~~~~~~~--v~s 70 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPE------PH---PNLSIRE--ITN 70 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCC------CC---TTEEEEE--CCS
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------CC---CCeEEEE--HhH
Confidence 4789999999 9999999999999999999999986432110 01 2454443 333
Q ss_pred CCCc----hhhhCCccEEEEecccCC
Q 040253 68 EGNF----DEPIRGCTGVFHLATPMD 89 (338)
Q Consensus 68 ~~~~----~~~~~~~d~vi~~a~~~~ 89 (338)
.+++ .+.+.++|++||+||...
T Consensus 71 ~~em~~~v~~~~~~~Dili~aAAvsD 96 (232)
T 2gk4_A 71 TKDLLIEMQERVQDYQVLIHSMAVSD 96 (232)
T ss_dssp HHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred HHHHHHHHHHhcCCCCEEEEcCcccc
Confidence 3322 233457999999999654
No 336
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=98.37 E-value=6.4e-07 Score=78.46 Aligned_cols=117 Identities=9% Similarity=0.043 Sum_probs=76.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCC--CeEEEEEcCCCcHHH-HHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERG--YAVRATVRDPDNKKK-VKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
.++||.|+|++|++|+.++..|+.+| .+|.+++++.++.+. ..++..... +. .++.-..++.++++++|+
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~~--~~-----~~i~~t~d~~~al~dADv 79 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCGF--EG-----LNLTFTSDIKEALTDAKY 79 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHCC--TT-----CCCEEESCHHHHHTTEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCcC--CC-----CceEEcCCHHHHhCCCCE
Confidence 36799999999999999999999988 589999886543332 111111010 10 122222456678899999
Q ss_pred EEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCcc-EEEEecC
Q 040253 81 VFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVR-RLVFTSS 128 (338)
Q Consensus 81 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~v~~Ss 128 (338)
||.+||.......+ -.+++..|+.....+.+.+.+..+.. .++.+|.
T Consensus 80 VvitaG~p~kpG~~-R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN 127 (343)
T 3fi9_A 80 IVSSGGAPRKEGMT-REDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN 127 (343)
T ss_dssp EEECCC-------C-HHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred EEEccCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence 99999864432222 23678999999999999998877334 3566664
No 337
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.33 E-value=1.8e-06 Score=69.02 Aligned_cols=73 Identities=14% Similarity=0.101 Sum_probs=59.7
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHC-CCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh--hCCccEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLER-GYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP--IRGCTGV 81 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~--~~~~d~v 81 (338)
.++|+|+| .|.+|..+++.|.+. |++|++++|+++....+.. .++..+.+|.++.+.+.++ ++++|+|
T Consensus 39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~--------~g~~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS--------EGRNVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH--------TTCCEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH--------CCCCEEEcCCCCHHHHHhccCCCCCCEE
Confidence 46899998 699999999999999 9999999998766554432 3567888999888777776 7789999
Q ss_pred EEecc
Q 040253 82 FHLAT 86 (338)
Q Consensus 82 i~~a~ 86 (338)
|.+.+
T Consensus 110 i~~~~ 114 (183)
T 3c85_A 110 LLAMP 114 (183)
T ss_dssp EECCS
T ss_pred EEeCC
Confidence 98765
No 338
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=98.33 E-value=6.7e-07 Score=73.65 Aligned_cols=73 Identities=16% Similarity=0.187 Sum_probs=60.2
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh-hCCccEEEEe
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP-IRGCTGVFHL 84 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~~ 84 (338)
|+|+|+|+ |.+|+++++.|.+.|++|++++++++....+... .++.++.+|.++.+.+.++ ++++|+||-+
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~-------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 72 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK-------LKATIIHGDGSHKEILRDAEVSKNDVVVIL 72 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH-------SSSEEEESCTTSHHHHHHHTCCTTCEEEEC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-------cCCeEEEcCCCCHHHHHhcCcccCCEEEEe
Confidence 58999995 9999999999999999999999987765554321 3568899999999888776 6789999966
Q ss_pred cc
Q 040253 85 AT 86 (338)
Q Consensus 85 a~ 86 (338)
.+
T Consensus 73 ~~ 74 (218)
T 3l4b_C 73 TP 74 (218)
T ss_dssp CS
T ss_pred cC
Confidence 54
No 339
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=98.31 E-value=9e-07 Score=67.43 Aligned_cols=73 Identities=12% Similarity=0.121 Sum_probs=60.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh-hCCccEEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP-IRGCTGVFH 83 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~ 83 (338)
.++|+|+| .|.+|+.+++.|.+.|++|++++++++..+.+.. .++..+.+|.++++.+.++ +.++|+||-
T Consensus 7 ~~~viIiG-~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~--------~g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVG-YGRVGSLLGEKLLASDIPLVVIETSRTRVDELRE--------RGVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH--------TTCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEEC-cCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH--------cCCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 46899998 5999999999999999999999998876655543 4678899999998877665 568999987
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
+.+
T Consensus 78 ~~~ 80 (140)
T 3fwz_A 78 TIP 80 (140)
T ss_dssp CCS
T ss_pred ECC
Confidence 764
No 340
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=98.20 E-value=6.1e-07 Score=76.26 Aligned_cols=80 Identities=19% Similarity=0.183 Sum_probs=46.6
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHC-CCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCcc
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLER-GYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCT 79 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 79 (338)
|+..+++|.|+|++|.+|+.+++.+.+. |+++.++.+.......-+..... .++ -..++...+++.+++.++|
T Consensus 1 ~~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~----~g~--~~~~v~~~~dl~~~l~~~D 74 (273)
T 1dih_A 1 MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGEL----AGA--GKTGVTVQSSLDAVKDDFD 74 (273)
T ss_dssp -CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCS----SSS--SCCSCCEESCSTTTTTSCS
T ss_pred CCCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHH----cCC--CcCCceecCCHHHHhcCCC
Confidence 6766789999999999999999998754 67877555432211000000000 000 0112222344556666899
Q ss_pred EEEEecc
Q 040253 80 GVFHLAT 86 (338)
Q Consensus 80 ~vi~~a~ 86 (338)
+||+++.
T Consensus 75 vVIDft~ 81 (273)
T 1dih_A 75 VFIDFTR 81 (273)
T ss_dssp EEEECSC
T ss_pred EEEEcCC
Confidence 9998875
No 341
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=98.18 E-value=7.9e-06 Score=71.01 Aligned_cols=116 Identities=12% Similarity=0.101 Sum_probs=68.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHHH-HHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKKV-KHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
.++||.|+|+ |.+|+.++..|+..|. ++.+++++++..+.. .++........++.....| .++++++|+
T Consensus 8 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~-------~~a~~~aDi 79 (326)
T 3vku_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE-------YSDAKDADL 79 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC-------GGGGTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc-------HHHhcCCCE
Confidence 4689999995 9999999999998885 899998865543321 1121111000233333322 356889999
Q ss_pred EEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 81 VFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 81 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
||.+||.......+. .++++.|+.....+.+.+.++.+...++.+|.
T Consensus 80 Vvi~ag~~~kpG~tR-~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN 126 (326)
T 3vku_A 80 VVITAGAPQKPGETR-LDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp EEECCCCC-----------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred EEECCCCCCCCCchH-HHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence 999998643222222 36788899999999999988874566776664
No 342
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=98.18 E-value=1.4e-05 Score=69.55 Aligned_cols=116 Identities=10% Similarity=0.111 Sum_probs=72.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHH-HHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKK-VKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
+++||.|+|+ |++|..++..|+..|. +|.+++++.+..+. ...+........++++.. .+ .++++++|+
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~------~~-~~a~~~aDv 77 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA------GD-YSDVKDCDV 77 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--------C-GGGGTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE------CC-HHHhCCCCE
Confidence 4579999997 9999999999999886 89999987654332 222221110112333221 11 356889999
Q ss_pred EEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 81 VFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 81 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
||.+++........ -.++...|+.....+.+.+.+..+...++.+|.
T Consensus 78 Vii~~g~p~k~g~~-r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 124 (318)
T 1y6j_A 78 IVVTAGANRKPGET-RLDLAKKNVMIAKEVTQNIMKYYNHGVILVVSN 124 (318)
T ss_dssp EEECCCC------C-HHHHHHHHHHHHHHHHHHHHHHCCSCEEEECSS
T ss_pred EEEcCCCCCCCCcC-HHHHHHhhHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 99999854322222 235678899999999999988763455665543
No 343
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=98.15 E-value=1.7e-06 Score=70.79 Aligned_cols=73 Identities=15% Similarity=0.149 Sum_probs=52.9
Q ss_pred CCcEEEEeCC----------------chhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCC
Q 040253 4 IAETVCVTGA----------------SGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAE 67 (338)
Q Consensus 4 ~~~~ilVtGa----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 67 (338)
.+|+|||||| ||.+|.++++.|+++|++|+++.+..... .+ .++. ..|+.+
T Consensus 7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l~--------~~---~g~~--~~dv~~ 73 (226)
T 1u7z_A 7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLP--------TP---PFVK--RVDVMT 73 (226)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCC--------CC---TTEE--EEECCS
T ss_pred CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcccc--------cC---CCCe--EEccCc
Confidence 3689999999 69999999999999999999988754210 01 2333 346666
Q ss_pred CCCchhh----hCCccEEEEecccCC
Q 040253 68 EGNFDEP----IRGCTGVFHLATPMD 89 (338)
Q Consensus 68 ~~~~~~~----~~~~d~vi~~a~~~~ 89 (338)
.+++.+. +.++|++||+||...
T Consensus 74 ~~~~~~~v~~~~~~~Dili~~Aav~d 99 (226)
T 1u7z_A 74 ALEMEAAVNASVQQQNIFIGCAAVAD 99 (226)
T ss_dssp HHHHHHHHHHHGGGCSEEEECCBCCS
T ss_pred HHHHHHHHHHhcCCCCEEEECCcccC
Confidence 5544333 347999999998643
No 344
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=98.14 E-value=1.7e-05 Score=68.82 Aligned_cols=115 Identities=10% Similarity=0.087 Sum_probs=70.9
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHH-HHHhcCC-CCCCcEEEEecccCCCCCchhhhCCccEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKV-KHLLELP-KASTHLTLWKADLAEEGNFDEPIRGCTGV 81 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 81 (338)
++||.|+|| |.+|..++..|+..|+ +|.+++++++..+.. ..+.... ......++. ...++ ++++++|+|
T Consensus 2 ~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~-----~t~d~-~a~~~aD~V 74 (309)
T 1ur5_A 2 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVT-----GTNNY-ADTANSDVI 74 (309)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEE-----EESCG-GGGTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEE-----ECCCH-HHHCCCCEE
Confidence 479999998 9999999999999996 888888877654332 1121100 000011111 11234 568899999
Q ss_pred EEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEec
Q 040253 82 FHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTS 127 (338)
Q Consensus 82 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 127 (338)
|.+++......... .++...|......+.+.+.+..+...++.+|
T Consensus 75 i~a~g~p~~~g~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 119 (309)
T 1ur5_A 75 VVTSGAPRKPGMSR-EDLIKVNADITRACISQAAPLSPNAVIIMVN 119 (309)
T ss_dssp EECCCC---------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred EEcCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence 99998544222221 2567888888899999998876233444443
No 345
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=98.14 E-value=8.8e-06 Score=70.49 Aligned_cols=118 Identities=19% Similarity=0.146 Sum_probs=78.0
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCC--CcHHHH-HHHhc-CC--CCCCcEEEEecccCCCCCchh
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDP--DNKKKV-KHLLE-LP--KASTHLTLWKADLAEEGNFDE 73 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~-~~~~~-~~--~~~~~~~~~~~Dl~d~~~~~~ 73 (338)
|++..++|.|+|+ |.+|+.++..|+..|+ +|.++++++ ...... .++.. .+ ....++.. ..| .+
T Consensus 4 m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~-t~d-------~~ 74 (315)
T 3tl2_A 4 MTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIG-TSD-------YA 74 (315)
T ss_dssp CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEE-ESC-------GG
T ss_pred cccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEE-cCC-------HH
Confidence 5555679999996 9999999999999998 999999873 222111 11110 00 00011111 111 25
Q ss_pred hhCCccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 74 PIRGCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 74 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
.++++|+||-++|.......+. .+++..|+...+.+.+.+.+..+...++.+|.
T Consensus 75 a~~~aDvVIiaag~p~kpg~~R-~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 75 DTADSDVVVITAGIARKPGMSR-DDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp GGTTCSEEEECCSCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred HhCCCCEEEEeCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 6789999999998654333333 37789999999999999988764456776664
No 346
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=98.12 E-value=3.7e-05 Score=66.45 Aligned_cols=172 Identities=13% Similarity=0.066 Sum_probs=101.2
Q ss_pred cEEEEeCCchhhHHHHHHHHHHC-C--CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLER-G--YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
|||.|+||+|.+|+.++..|..+ + .++..+++++.......++...+. ..++..+.+ +...+.++++|+||
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~~~-~~~v~~~~~-----~~~~~~~~~aDivi 74 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPT-AVKIKGFSG-----EDATPALEGADVVL 74 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTSCS-SEEEEEECS-----SCCHHHHTTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCCCC-CceEEEecC-----CCcHHHhCCCCEEE
Confidence 58999999999999999999875 4 578888887622222222222110 011221211 23457788999999
Q ss_pred EecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCceeeeccCCCCCCc-CCCCCCchhhhhhcc-CCC
Q 040253 83 HLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVY-DETSWSDLDFVRSVK-MTG 160 (338)
Q Consensus 83 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v~~~~~~~~~~~-~e~~~~~~~~~~~~~-~p~ 160 (338)
-+||.......+. .++++.|+.....+.+.+.++.+...++.+|...-.- .++ .|. ...... ++.
T Consensus 75 i~ag~~rkpG~~R-~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtNPvd~~------t~~a~~~------~k~sg~~p~~ 141 (312)
T 3hhp_A 75 ISAGVARKPGMDR-SDLFNVNAGIVKNLVQQVAKTCPKACIGIITNPVNTT------VAIAAEV------LKKAGVYDKN 141 (312)
T ss_dssp ECCSCSCCTTCCH-HHHHHHHHHHHHHHHHHHHHHCTTSEEEECSSCHHHH------HHHHHHH------HHHTTCCCTT
T ss_pred EeCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCcEEEEecCcchhH------HHHHHHH------HHHcCCCCcc
Confidence 9998654333333 4788999999999999998876445677766531100 000 000 000000 233
Q ss_pred chHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCC
Q 040253 161 WMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPF 197 (338)
Q Consensus 161 ~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~ 197 (338)
...|..-+..-++-..+++..|++..-++ ..|.|..
T Consensus 142 rv~G~~~LD~~R~~~~la~~lgv~~~~v~-~~V~G~H 177 (312)
T 3hhp_A 142 KLFGVTTLDIIRSNTFVAELKGKQPGEVE-VPVIGGH 177 (312)
T ss_dssp SEEECCHHHHHHHHHHHHHHHTCCGGGCC-CCEEECS
T ss_pred eEEEEechhHHHHHHHHHHHhCcChhHcc-eeEEecc
Confidence 34455533344555556666677666666 6677765
No 347
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=98.09 E-value=6.1e-06 Score=73.22 Aligned_cols=71 Identities=23% Similarity=0.216 Sum_probs=58.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
+++|+|.| +|++|+.+++.|.+. ++|.+.+|+.++...+. .....+..|+.|.+++.++++++|+||++
T Consensus 16 ~~~v~IiG-aG~iG~~ia~~L~~~-~~V~V~~R~~~~a~~la---------~~~~~~~~d~~~~~~l~~ll~~~DvVIn~ 84 (365)
T 2z2v_A 16 HMKVLILG-AGNIGRAIAWDLKDE-FDVYIGDVNNENLEKVK---------EFATPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHTTT-SEEEEEESCHHHHHHHT---------TTSEEEECCTTCHHHHHHHHTTCSCEEEC
T ss_pred CCeEEEEc-CCHHHHHHHHHHHcC-CeEEEEECCHHHHHHHH---------hhCCeEEEecCCHHHHHHHHhCCCEEEEC
Confidence 57899998 599999999999988 99999999876654432 23355678998888899999999999998
Q ss_pred cc
Q 040253 85 AT 86 (338)
Q Consensus 85 a~ 86 (338)
..
T Consensus 85 ~P 86 (365)
T 2z2v_A 85 LP 86 (365)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 348
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=98.08 E-value=1.8e-05 Score=69.28 Aligned_cols=119 Identities=13% Similarity=0.081 Sum_probs=76.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHH-HHHhc-CCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKV-KHLLE-LPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
++|||.|+|| |.+|..++..|...|+ +|.+++++++..+.. ..+.. .... . ....+.-..++.++++++|+
T Consensus 8 ~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~-~----~~~~i~~t~d~~ea~~~aDi 81 (331)
T 1pzg_A 8 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVV-D----TNVSVRAEYSYEAALTGADC 81 (331)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHT-T----CCCCEEEECSHHHHHTTCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhcc-C----CCCEEEEeCCHHHHhCCCCE
Confidence 3479999997 9999999999999998 999999987655441 11111 0000 0 00111112445567899999
Q ss_pred EEEecccCCCCCCC----ccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 81 VFHLATPMDFESKD----PENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 81 vi~~a~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
||-+++........ ........|+.....+.+.+.+..+...++.+|.
T Consensus 82 Vi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~tN 133 (331)
T 1pzg_A 82 VIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVTN 133 (331)
T ss_dssp EEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcC
Confidence 99999754322220 1235677888888999998887763345554443
No 349
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=98.06 E-value=4.9e-05 Score=65.13 Aligned_cols=112 Identities=10% Similarity=0.043 Sum_probs=77.5
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHH----HHHHhc-CCCCCCcEEEEecccCCCCCchhhhCCc
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKK----VKHLLE-LPKASTHLTLWKADLAEEGNFDEPIRGC 78 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 78 (338)
|||.|+|+ |.+|..++..|+..|+ +|.+++++++..+. +.+... .+ ....+... .+ .++++++
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~---~~~~i~~t-----~d-~~a~~~a 70 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGID---KYPKIVGG-----AD-YSLLKGS 70 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTT---CCCEEEEE-----SC-GGGGTTC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcC---CCCEEEEe-----CC-HHHhCCC
Confidence 58999998 9999999999999887 89999997755431 112111 11 11122211 12 4678899
Q ss_pred cEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 79 TGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 79 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
|+||.+++.......+ -.+++..|+...+.+.+.+.+..+...++.+|.
T Consensus 71 DiVViaag~~~kpG~~-R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN 119 (294)
T 1oju_A 71 EIIVVTAGLARKPGMT-RLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp SEEEECCCCCCCSSCC-HHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred CEEEECCCCCCCCCCc-HHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 9999999854332222 236788999999999999998875567777775
No 350
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=98.04 E-value=6.7e-05 Score=65.18 Aligned_cols=115 Identities=10% Similarity=0.072 Sum_probs=76.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHH----HHHHhcCCCCCCcEEEEecccCCCCCchhhhCCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKK----VKHLLELPKASTHLTLWKADLAEEGNFDEPIRGC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 78 (338)
.++||.|+|+ |.+|..++..|+..|. +|.+++++++..+. +.+...... ....+.. ..+. ++++++
T Consensus 6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~--~~~~v~~-----t~d~-~a~~~a 76 (324)
T 3gvi_A 6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDG--FDAKFTG-----ANDY-AAIEGA 76 (324)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHT--CCCCEEE-----ESSG-GGGTTC
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcC--CCCEEEE-----eCCH-HHHCCC
Confidence 3579999997 9999999999999988 99999998765432 111110000 0111111 1122 678899
Q ss_pred cEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 79 TGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 79 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
|+||.+++.......+. .+++..|+.....+.+.+.+..+-..++.+|.
T Consensus 77 DiVIiaag~p~k~G~~R-~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 77 DVVIVTAGVPRKPGMSR-DDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp SEEEECCSCCCC------CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred CEEEEccCcCCCCCCCH-HHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 99999998543322222 36788899999999999988774457776665
No 351
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=97.97 E-value=3.2e-05 Score=67.21 Aligned_cols=116 Identities=12% Similarity=0.072 Sum_probs=77.3
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHH-HHHhcCC-CCCCcEEEEecccCCCCCchhhhCCccEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKV-KHLLELP-KASTHLTLWKADLAEEGNFDEPIRGCTGV 81 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 81 (338)
++||.|+| +|.+|+.++..|+..|. +|.+++++++..+.. ..+.... ....+..+... .+ .++++++|+|
T Consensus 5 ~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t-----~d-~~a~~~aDvV 77 (321)
T 3p7m_A 5 RKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGT-----ND-YKDLENSDVV 77 (321)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE-----SC-GGGGTTCSEE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEc-----CC-HHHHCCCCEE
Confidence 57999999 59999999999999887 999999987654322 1221110 00011122111 11 2578899999
Q ss_pred EEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 82 FHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 82 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
|.+++........ -.+++..|+.....+.+.+.+..+-..++.+|.
T Consensus 78 Ii~ag~p~k~G~~-R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 123 (321)
T 3p7m_A 78 IVTAGVPRKPGMS-RDDLLGINIKVMQTVGEGIKHNCPNAFVICITN 123 (321)
T ss_dssp EECCSCCCCTTCC-HHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEcCCcCCCCCCC-HHHHHHHhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 9999854432222 236788899999999999988774457776664
No 352
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=97.97 E-value=4.3e-06 Score=68.43 Aligned_cols=73 Identities=15% Similarity=0.183 Sum_probs=51.1
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEec
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHLA 85 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 85 (338)
|+|+|+||+|++|+.+++.|.+.|++|.+++|+++..+.+...... .+. ..|+. ..++.++++++|+||++.
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-----~~~--~~~~~-~~~~~~~~~~~D~Vi~~~ 72 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-----IAG--DASIT-GMKNEDAAEACDIAVLTI 72 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-----HHS--SCCEE-EEEHHHHHHHCSEEEECS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-----ccc--cCCCC-hhhHHHHHhcCCEEEEeC
Confidence 4899999999999999999999999999999986654443321100 000 02232 234556677899999987
Q ss_pred c
Q 040253 86 T 86 (338)
Q Consensus 86 ~ 86 (338)
.
T Consensus 73 ~ 73 (212)
T 1jay_A 73 P 73 (212)
T ss_dssp C
T ss_pred C
Confidence 5
No 353
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=97.95 E-value=0.00013 Score=63.44 Aligned_cols=117 Identities=13% Similarity=0.089 Sum_probs=78.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHHH-HHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKKV-KHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
..++|.|+|+ |.+|+.++..|+.+|. ++..++++....+.. .++............+.. .++ +.++++|+
T Consensus 18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~-----~d~-~~~~~aDi 90 (331)
T 4aj2_A 18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS-----KDY-SVTANSKL 90 (331)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC-----SSG-GGGTTEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc-----CCH-HHhCCCCE
Confidence 3689999996 9999999999999886 899998875433321 112111000011122221 122 35889999
Q ss_pred EEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 81 VFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 81 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
||.+||.......+. .++++.|+.....+.+.+.++.+...++.+|.
T Consensus 91 Vvi~aG~~~kpG~tR-~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 91 VIITAGARQQEGESR-LNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp EEECCSCCCCTTCCG-GGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EEEccCCCCCCCccH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 999998654333333 37899999999999999988874567777765
No 354
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=97.93 E-value=8.8e-06 Score=65.75 Aligned_cols=98 Identities=15% Similarity=0.105 Sum_probs=64.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh---h--CCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP---I--RGC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---~--~~~ 78 (338)
.+++|+|+||+|.+|..+++.+...|.+|++++|+++..+..+.+ +... ..|..+.+....+ . .++
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~--------g~~~-~~d~~~~~~~~~~~~~~~~~~~ 108 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRL--------GVEY-VGDSRSVDFADEILELTDGYGV 108 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTT--------CCSE-EEETTCSTHHHHHHHHTTTCCE
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHc--------CCCE-EeeCCcHHHHHHHHHHhCCCCC
Confidence 368999999999999999999999999999999876544333221 1111 2366555433322 2 259
Q ss_pred cEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCce
Q 040253 79 TGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAG 130 (338)
Q Consensus 79 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~ 130 (338)
|+||++++. .. ....++.++.. .+++.+++..
T Consensus 109 D~vi~~~g~----------~~-------~~~~~~~l~~~---G~~v~~g~~~ 140 (198)
T 1pqw_A 109 DVVLNSLAG----------EA-------IQRGVQILAPG---GRFIELGKKD 140 (198)
T ss_dssp EEEEECCCT----------HH-------HHHHHHTEEEE---EEEEECSCGG
T ss_pred eEEEECCch----------HH-------HHHHHHHhccC---CEEEEEcCCC
Confidence 999999862 11 23445555544 4899888754
No 355
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=97.93 E-value=0.0001 Score=63.74 Aligned_cols=113 Identities=8% Similarity=0.024 Sum_probs=74.4
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHH----HHHHhcCCCCCCcEEEEecccCCCCCchhhhCCcc
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKK----VKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCT 79 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 79 (338)
|||.|+|+ |.+|+.++..|+..|. +|.++++++...+. +.+...... .+..+...| ..++++++|
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~--~~~~v~~~~------~~~a~~~aD 71 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHG--FDTRVTGTN------DYGPTEDSD 71 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHT--CCCEEEEES------SSGGGTTCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccC--CCcEEEECC------CHHHhCCCC
Confidence 58999996 9999999999998885 89999998765432 111110000 112222111 135788899
Q ss_pred EEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 80 GVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 80 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
+||-+|+.......+. .+++..|+.....+.+.+.++.+...++.+|.
T Consensus 72 vVii~ag~~~kpG~~R-~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 72 VCIITAGLPRSPGMSR-DDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp EEEECCCC-------C-HHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred EEEECCCCCCCCCCCH-HHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 9999998643322222 36789999999999999988874566776664
No 356
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=97.90 E-value=6.5e-06 Score=68.48 Aligned_cols=71 Identities=13% Similarity=0.108 Sum_probs=58.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh-hCCccEEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP-IRGCTGVFH 83 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~ 83 (338)
.++|+|+|+ |.+|+.+++.|.+.|+ |++++++++....+. .++.++.+|.+|++.+.++ ++++|.||.
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~---------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR---------SGANFVHGDPTRVSDLEKANVRGARAVIV 77 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH---------TTCEEEESCTTCHHHHHHTTCTTCSEEEE
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh---------cCCeEEEcCCCCHHHHHhcCcchhcEEEE
Confidence 468999996 9999999999999999 999988876554432 2578999999999888776 789999997
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
+.+
T Consensus 78 ~~~ 80 (234)
T 2aef_A 78 DLE 80 (234)
T ss_dssp CCS
T ss_pred cCC
Confidence 654
No 357
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=97.89 E-value=1.7e-05 Score=68.04 Aligned_cols=70 Identities=17% Similarity=0.229 Sum_probs=51.7
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
|+++||+|.|+|++|.+|+.+++.|.+.|++|++.+|+++..+.+... ++ +.. +..++++++|+
T Consensus 7 ~~~mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~--------g~-----~~~---~~~~~~~~aDv 70 (286)
T 3c24_A 7 NDVGPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGM--------GI-----PLT---DGDGWIDEADV 70 (286)
T ss_dssp CSCCCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHT--------TC-----CCC---CSSGGGGTCSE
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhc--------CC-----CcC---CHHHHhcCCCE
Confidence 455568999999889999999999999999999998876655444321 11 112 34456778999
Q ss_pred EEEecc
Q 040253 81 VFHLAT 86 (338)
Q Consensus 81 vi~~a~ 86 (338)
||-+..
T Consensus 71 Vi~av~ 76 (286)
T 3c24_A 71 VVLALP 76 (286)
T ss_dssp EEECSC
T ss_pred EEEcCC
Confidence 997764
No 358
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=97.88 E-value=5.5e-05 Score=65.85 Aligned_cols=120 Identities=12% Similarity=0.135 Sum_probs=74.8
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHHHH-HhcC-CCCCCcEEEEecccCCCCCchhhhCC
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKVKH-LLEL-PKASTHLTLWKADLAEEGNFDEPIRG 77 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (338)
|+. ++||.|+|| |.+|..++..|+..|+ +|.+++++++..+.... +... ...... ..+....++ +++++
T Consensus 1 m~~-~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~-----~~i~~t~d~-~al~~ 72 (322)
T 1t2d_A 1 MAP-KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSN-----CKVSGSNTY-DDLAG 72 (322)
T ss_dssp -CC-CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCC-----CCEEEECCG-GGGTT
T ss_pred CCC-CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCC-----cEEEECCCH-HHhCC
Confidence 543 579999997 9999999999999997 88888888765443211 1110 000001 111111334 66889
Q ss_pred ccEEEEecccCCCCCCC----ccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 78 CTGVFHLATPMDFESKD----PENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 78 ~d~vi~~a~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
+|+||-+++........ ...++...|+.....+.+.+.+..+-..++.+|.
T Consensus 73 aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 127 (322)
T 1t2d_A 73 ADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVTN 127 (322)
T ss_dssp CSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred CCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 99999999754321111 0235677788888888888877653456665554
No 359
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=97.88 E-value=7.7e-06 Score=71.92 Aligned_cols=99 Identities=17% Similarity=0.162 Sum_probs=59.9
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC-----C-eEEEEEcCCCcHHHHHHHhcCCCCCCcEEE-EecccCCCCCchhhhCC
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG-----Y-AVRATVRDPDNKKKVKHLLELPKASTHLTL-WKADLAEEGNFDEPIRG 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~d~~~~~~~~~~ 77 (338)
|+||+|.||||++|+.+++.|.+++ + +++.+.+..+....+.... +++.. ...++.+.+ .+.+.+
T Consensus 9 m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~------~~l~~~~~~~~~~~~--~~~~~~ 80 (352)
T 2nqt_A 9 ATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHH------PHLTPLAHRVVEPTE--AAVLGG 80 (352)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTC------TTCGGGTTCBCEECC--HHHHTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhc------ccccccceeeeccCC--HHHhcC
Confidence 5799999999999999999999877 4 6777764332211111110 11100 011121221 234568
Q ss_pred ccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCcee
Q 040253 78 CTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGT 131 (338)
Q Consensus 78 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v 131 (338)
+|+||.+.+... +..++..+ +.| .++|-+|+...
T Consensus 81 ~DvVf~alg~~~-----------------s~~~~~~~-~~G--~~vIDlSa~~R 114 (352)
T 2nqt_A 81 HDAVFLALPHGH-----------------SAVLAQQL-SPE--TLIIDCGADFR 114 (352)
T ss_dssp CSEEEECCTTSC-----------------CHHHHHHS-CTT--SEEEECSSTTT
T ss_pred CCEEEECCCCcc-----------------hHHHHHHH-hCC--CEEEEECCCcc
Confidence 999998887411 24566677 667 47899998754
No 360
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=97.88 E-value=0.00015 Score=63.05 Aligned_cols=116 Identities=13% Similarity=0.103 Sum_probs=75.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCC--CeEEEEEcCCCcHHHH-HHHhc-CCCCCCcEEEEecccCCCCCchhhhCCcc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERG--YAVRATVRDPDNKKKV-KHLLE-LPKASTHLTLWKADLAEEGNFDEPIRGCT 79 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 79 (338)
+++||.|+|| |.+|..++..|+.+| .+|.+++++++..+.. ..+.. .+.....+++.. | ..++++++|
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~-~------~~~a~~~aD 76 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA-G------EYSDCHDAD 76 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE-C------CGGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe-C------CHHHhCCCC
Confidence 3579999998 999999999999887 4888888875433321 11111 111101223322 1 145688999
Q ss_pred EEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 80 GVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 80 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
+||.+++.......+. ..+...|+.....+.+.+.+..+-..++.+|.
T Consensus 77 vVvi~ag~~~~~g~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 124 (317)
T 3d0o_A 77 LVVICAGAAQKPGETR-LDLVSKNLKIFKSIVGEVMASKFDGIFLVATN 124 (317)
T ss_dssp EEEECCCCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred EEEECCCCCCCCCCcH-HHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 9999998644322222 35678899999999999888874556666553
No 361
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=97.85 E-value=0.00013 Score=63.41 Aligned_cols=115 Identities=12% Similarity=0.126 Sum_probs=73.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHH-HHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKK-VKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGV 81 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 81 (338)
.+||.|+|| |.+|..++..|+..+. ++..++++.+..+. ..++........++++.. | -.++++++|+|
T Consensus 5 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~-~------~~~a~~~aDvV 76 (318)
T 1ez4_A 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-G------EYSDCKDADLV 76 (318)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-C------CGGGGTTCSEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEE-C------CHHHhCCCCEE
Confidence 379999998 9999999999988875 89999886544432 222211100012333332 1 24568899999
Q ss_pred EEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 82 FHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 82 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
|.+++.......+. .++...|+.....+.+.+.+..+-..++.+|.
T Consensus 77 ii~ag~~~~~g~~R-~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 122 (318)
T 1ez4_A 77 VITAGAPQKPGESR-LDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN 122 (318)
T ss_dssp EECCCC-----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred EECCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 99998543222222 25678899999999999988875567776654
No 362
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=97.85 E-value=0.00011 Score=63.93 Aligned_cols=116 Identities=11% Similarity=0.080 Sum_probs=75.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHH-HHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKK-VKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
+.+||.|+|| |.+|..++..|+..+. ++..++++.+..+. ..++........++++.. | -.++++++|+
T Consensus 8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~-~------~~~a~~~aDv 79 (326)
T 2zqz_A 8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYS-A------EYSDAKDADL 79 (326)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEE-C------CGGGGGGCSE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEE-C------CHHHhCCCCE
Confidence 3579999998 9999999999988774 89999886544333 222221110112333332 1 1456889999
Q ss_pred EEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 81 VFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 81 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
||.+++.......+. ..+...|+.....+.+.+.++.+-..++.+|.
T Consensus 80 Vii~ag~~~k~g~~R-~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 126 (326)
T 2zqz_A 80 VVITAGAPQKPGETR-LDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp EEECCCCC-----CH-HHHHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred EEEcCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 999998543222222 36678899999999998888764567776654
No 363
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=97.85 E-value=0.00013 Score=62.42 Aligned_cols=115 Identities=10% Similarity=0.020 Sum_probs=75.5
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCC--CeEEEEEcCCCcHHH-HHHHh-cCCCCCCcEEEEecccCCCCCchhhhCCccEE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERG--YAVRATVRDPDNKKK-VKHLL-ELPKASTHLTLWKADLAEEGNFDEPIRGCTGV 81 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 81 (338)
|||.|+| +|.||+.++-.|+.++ .++..++.++..... ..++. ..+........... .|+ +.++++|+|
T Consensus 1 MKV~IiG-aG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~~~~~~~i~~~--~d~----~~~~~aDvV 73 (294)
T 2x0j_A 1 MKLGFVG-AGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----SLLKGSEII 73 (294)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGGGTCCCEEEEE--SCG----GGGTTCSEE
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccccCCCCCeEecC--CCH----HHhCCCCEE
Confidence 6899999 5999999999998876 478888876532211 11111 11000011122211 112 467889999
Q ss_pred EEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 82 FHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 82 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
|-.||.......+. .++++.|....+.+.+.+.++.+...++.+|.
T Consensus 74 vitAG~prkpGmtR-~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN 119 (294)
T 2x0j_A 74 VVTAGLARKPGMTR-LDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp EECCCCCCCSSSCH-HHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred EEecCCCCCCCCch-HHHHHHHHHHHHHHHHHHHhcCCceEEEEecC
Confidence 99999665444444 37899999999999999998874556666665
No 364
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=97.84 E-value=0.00028 Score=61.26 Aligned_cols=119 Identities=15% Similarity=0.172 Sum_probs=76.2
Q ss_pred CCC-CCcEEEEeCCchhhHHHHHHHHHHCC--CeEEEEEcCCCcHHHH-HHHhc-CCCCCCcEEEEecccCCCCCchhhh
Q 040253 1 MGS-IAETVCVTGASGFIGSWLIMRLLERG--YAVRATVRDPDNKKKV-KHLLE-LPKASTHLTLWKADLAEEGNFDEPI 75 (338)
Q Consensus 1 m~~-~~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~ 75 (338)
|.+ +++||.|+|+ |.+|..++..|+..| .+|.+++++++..... ..+.. .+.....+.+... ..+++
T Consensus 1 m~~~~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~~-------~~~al 72 (316)
T 1ldn_A 1 MKNNGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHG-------DYDDC 72 (316)
T ss_dssp CTTTTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEEC-------CGGGT
T ss_pred CCCCCCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEcC-------cHHHh
Confidence 655 4579999998 999999999998877 3899999876433321 11211 1111112333321 13568
Q ss_pred CCccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 76 RGCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 76 ~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
+++|+||-+++......... .++...|......+.+.+.+..+...++.+|-
T Consensus 73 ~~aDvViia~~~~~~~g~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~tN 124 (316)
T 1ldn_A 73 RDADLVVICAGANQKPGETR-LDLVDKNIAIFRSIVESVMASGFQGLFLVATN 124 (316)
T ss_dssp TTCSEEEECCSCCCCTTTCS-GGGHHHHHHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred CCCCEEEEcCCCCCCCCCCH-HHHHHcChHHHHHHHHHHHHHCCCCEEEEeCC
Confidence 89999999997644322222 35678888888889888887763345555543
No 365
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=97.82 E-value=3.8e-05 Score=69.26 Aligned_cols=74 Identities=15% Similarity=0.190 Sum_probs=61.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh-hCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP-IRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi 82 (338)
..++|+|+| .|.+|+.+++.|.+.|++|++++++++....++. .++.++.+|.++++.+.++ +.++|+||
T Consensus 3 ~~~~viIiG-~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~--------~g~~vi~GDat~~~~L~~agi~~A~~vi 73 (413)
T 3l9w_A 3 HGMRVIIAG-FGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK--------FGMKVFYGDATRMDLLESAGAAKAEVLI 73 (413)
T ss_dssp -CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH--------TTCCCEESCTTCHHHHHHTTTTTCSEEE
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh--------CCCeEEEcCCCCHHHHHhcCCCccCEEE
Confidence 356899998 5999999999999999999999999877665543 4678899999999988877 67899998
Q ss_pred Eecc
Q 040253 83 HLAT 86 (338)
Q Consensus 83 ~~a~ 86 (338)
-+..
T Consensus 74 v~~~ 77 (413)
T 3l9w_A 74 NAID 77 (413)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 7764
No 366
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.82 E-value=0.00017 Score=62.30 Aligned_cols=114 Identities=18% Similarity=0.235 Sum_probs=68.9
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHHH-HHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKKV-KHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
|||.|+|| |.+|..++..|+..|+ +|.+++++++..... ..+...........+.. .+ .++++++|+||
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~----~~a~~~aDvVI 72 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GG----HSELADAQVVI 72 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---EC----GGGGTTCSEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CC----HHHhCCCCEEE
Confidence 58999997 9999999999999998 999999976533321 11111100001222221 12 24678999999
Q ss_pred EecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 83 HLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 83 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
.+++......... .++...|+.....+++.+.+..+-..++.+|.
T Consensus 73 i~~~~~~~~g~~r-~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tN 117 (304)
T 2v6b_A 73 LTAGANQKPGESR-LDLLEKNADIFRELVPQITRAAPDAVLLVTSN 117 (304)
T ss_dssp ECC-------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSS
T ss_pred EcCCCCCCCCCcH-HHHHHhHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 9997533222222 25678899988999888887653445665554
No 367
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=97.81 E-value=0.0002 Score=62.00 Aligned_cols=114 Identities=14% Similarity=0.164 Sum_probs=76.0
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCC--CeEEEEEcCCCcHHH-HHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERG--YAVRATVRDPDNKKK-VKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
|||.|+|| |.+|..++..|+..+ .++..++++.++.+. ..++........++++.. + + .++++++|+||
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~----~~a~~~aD~Vi 72 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--S----YGDLEGARAVV 72 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--C----GGGGTTEEEEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--C----HHHhCCCCEEE
Confidence 58999997 999999999999887 689999987544332 222222110002233332 1 1 45688999999
Q ss_pred EecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 83 HLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 83 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
.+++......... .++...|+.....+.+.+.+..+...++.+|.
T Consensus 73 i~ag~~~~~g~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 73 LAAGVAQRPGETR-LQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp ECCCCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred ECCCCCCCCCcCH-HHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 9998644322222 36678899999999999888764566776654
No 368
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=97.79 E-value=5.9e-05 Score=66.59 Aligned_cols=74 Identities=19% Similarity=0.271 Sum_probs=55.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----Cc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-----GC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~ 78 (338)
..++|||+||+|-+|..+++.+...|.+|++++|+++..+..+.+ +.. ...|+.+.+++.+.+. ++
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~--------g~~-~~~d~~~~~~~~~~~~~~~~~~~ 239 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSI--------GGE-VFIDFTKEKDIVGAVLKATDGGA 239 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHT--------TCC-EEEETTTCSCHHHHHHHHHTSCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHc--------CCc-eEEecCccHhHHHHHHHHhCCCC
Confidence 357999999999999999999999999999999987766544432 111 1237765555555443 69
Q ss_pred cEEEEecc
Q 040253 79 TGVFHLAT 86 (338)
Q Consensus 79 d~vi~~a~ 86 (338)
|+||++++
T Consensus 240 D~vi~~~g 247 (347)
T 2hcy_A 240 HGVINVSV 247 (347)
T ss_dssp EEEEECSS
T ss_pred CEEEECCC
Confidence 99999987
No 369
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.77 E-value=0.00021 Score=61.85 Aligned_cols=115 Identities=11% Similarity=0.070 Sum_probs=73.3
Q ss_pred cEEEEeCCchhhHHHHHHHHHHC--CCeEEEEEcCCCcHHHHHH-HhcC-CCCCCcEEEEecccCCCCCchhhhCCccEE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLER--GYAVRATVRDPDNKKKVKH-LLEL-PKASTHLTLWKADLAEEGNFDEPIRGCTGV 81 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~-~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 81 (338)
|||.|+|+ |.+|..++..|... |++|.+++++++..+.... +... ........+. ...++.+ ++++|+|
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~-----~t~d~~~-l~~aDvV 73 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVT-----GSNDYAD-TANSDIV 73 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEE-----EESCGGG-GTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEE-----ECCCHHH-HCCCCEE
Confidence 58999997 99999999999885 7999999998876554321 1110 0000011111 1122333 7889999
Q ss_pred EEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 82 FHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 82 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
|-+++........ ..++...|+.....+.+.+.+..+...++.+|.
T Consensus 74 iiav~~p~~~g~~-r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~tN 119 (310)
T 1guz_A 74 IITAGLPRKPGMT-REDLLMKNAGIVKEVTDNIMKHSKNPIIIVVSN 119 (310)
T ss_dssp EECCSCCCCTTCC-HHHHHHHHHHHHHHHHHHHHHHCSSCEEEECCS
T ss_pred EEeCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEcC
Confidence 9998743321111 235677888888899888877653456666644
No 370
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.76 E-value=0.00052 Score=59.88 Aligned_cols=114 Identities=13% Similarity=0.087 Sum_probs=73.6
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHHH-HHhc-CC--CCCCcEEEEecccCCCCCchhhhCCcc
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKVK-HLLE-LP--KASTHLTLWKADLAEEGNFDEPIRGCT 79 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~-~~--~~~~~~~~~~~Dl~d~~~~~~~~~~~d 79 (338)
+++|.|+|| |.+|..++..|+..|+ +|.+++++++..+... .+.. .. ....++.. ..++ ++++++|
T Consensus 14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~-------t~d~-~al~~aD 84 (328)
T 2hjr_A 14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFG-------ENNY-EYLQNSD 84 (328)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-------ESCG-GGGTTCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEE-------CCCH-HHHCCCC
Confidence 468999997 9999999999999998 9999999876554321 1110 00 00012221 1234 5688999
Q ss_pred EEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 80 GVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 80 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
+||-+++.......... ++...|+.....+.+.+.+..+...++.+|.
T Consensus 85 ~VI~avg~p~k~g~tr~-dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 85 VVIITAGVPRKPNMTRS-DLLTVNAKIVGSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp EEEECCSCCCCTTCCSG-GGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEEEcCCCCCCCCCchh-hHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 99999875432222222 4567788888888888877653445665554
No 371
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=97.75 E-value=0.00039 Score=60.32 Aligned_cols=114 Identities=13% Similarity=0.060 Sum_probs=76.5
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHHH----HHHhcCCCCCCcEEEEecccCCCCCchhhhCC
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKKV----KHLLELPKASTHLTLWKADLAEEGNFDEPIRG 77 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (338)
..+||.|+|+ |.+|+.++..|+..|. +|.+++++.+..+.. .+..... ...++. ...| +. .+++
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~-~~~~i~-~t~d------~~-~~~d 89 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFL-HTAKIV-SGKD------YS-VSAG 89 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGS-CCSEEE-EESS------SC-SCSS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcc-cCCeEE-EcCC------HH-HhCC
Confidence 4589999998 9999999999999885 899998866543321 1111111 011221 1122 22 3778
Q ss_pred ccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 78 CTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 78 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
+|+||-+||.......+. .+.+..|+.....+.+.+.+..+-..++.+|.
T Consensus 90 aDiVIitaG~p~kpG~tR-~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 90 SKLVVITAGARQQEGESR-LNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp CSEEEECCSCCCCSSCCT-TGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCEEEEeCCCCCCCCCCH-HHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 999999998654333333 36789999999999999988764566776664
No 372
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=97.72 E-value=2.7e-05 Score=69.34 Aligned_cols=74 Identities=14% Similarity=0.118 Sum_probs=56.9
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
.++|+|+|+ |.+|..+++.|...|.+|++++|+++..+....... .. +.+|..+.+++.+++.++|+||++
T Consensus 166 ~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g-----~~---~~~~~~~~~~l~~~~~~~DvVi~~ 236 (369)
T 2eez_A 166 PASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG-----GR---VITLTATEANIKKSVQHADLLIGA 236 (369)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT-----TS---EEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC-----ce---EEEecCCHHHHHHHHhCCCEEEEC
Confidence 589999998 999999999999999999999998765544433211 11 345666666777888899999999
Q ss_pred ccc
Q 040253 85 ATP 87 (338)
Q Consensus 85 a~~ 87 (338)
++.
T Consensus 237 ~g~ 239 (369)
T 2eez_A 237 VLV 239 (369)
T ss_dssp CC-
T ss_pred CCC
Confidence 874
No 373
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=97.71 E-value=4.7e-05 Score=66.78 Aligned_cols=74 Identities=19% Similarity=0.204 Sum_probs=54.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh-----CCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI-----RGC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~~ 78 (338)
.+++|+|+||+|-||..+++.+...|.+|++++|+++..+..+.+ +.. ...|..+.+++.+.+ .++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~--------g~~-~~~d~~~~~~~~~~~~~~~~~~~ 215 (333)
T 1v3u_A 145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQI--------GFD-AAFNYKTVNSLEEALKKASPDGY 215 (333)
T ss_dssp SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--------TCS-EEEETTSCSCHHHHHHHHCTTCE
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhc--------CCc-EEEecCCHHHHHHHHHHHhCCCC
Confidence 368999999999999999999999999999999876555444322 111 224666644444433 269
Q ss_pred cEEEEecc
Q 040253 79 TGVFHLAT 86 (338)
Q Consensus 79 d~vi~~a~ 86 (338)
|+||+++|
T Consensus 216 d~vi~~~g 223 (333)
T 1v3u_A 216 DCYFDNVG 223 (333)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999998
No 374
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=97.69 E-value=0.00045 Score=60.41 Aligned_cols=173 Identities=13% Similarity=0.077 Sum_probs=103.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC-------eEEEEEcCCCcHHHHH----HHhcCCCCCCcEEEEecccCCCCCchh
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY-------AVRATVRDPDNKKKVK----HLLELPKASTHLTLWKADLAEEGNFDE 73 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~----~~~~~~~~~~~~~~~~~Dl~d~~~~~~ 73 (338)
.-||.|+||+|.||++++-.|..... ++..++..+.. ..++ ++...... .....+.. .+..+
T Consensus 24 ~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~-~~~~Gva~DL~~~~~~-~~~~~~~~-----~~~~~ 96 (345)
T 4h7p_A 24 AVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPAL-KALAGVEAELEDCAFP-LLDKVVVT-----ADPRV 96 (345)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGH-HHHHHHHHHHHHTTCT-TEEEEEEE-----SCHHH
T ss_pred CCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCcc-ccchhhhhhhhhcCcc-CCCcEEEc-----CChHH
Confidence 35999999999999999998887532 57777664321 1111 11111100 11122221 23457
Q ss_pred hhCCccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCC-CccEEEEecCce---eeeccCCCCCCcCCCCCCc
Q 040253 74 PIRGCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAK-TVRRLVFTSSAG---TLDVEEHRKPVYDETSWSD 149 (338)
Q Consensus 74 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~~~v~~Ss~~---v~~~~~~~~~~~~e~~~~~ 149 (338)
+++++|+||-+||.......+. .++++.|+...+.+.+.+.+.. +-.+++.+|... +|- ......
T Consensus 97 a~~~advVvi~aG~prkpGmtR-~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsNPvd~~~~i-------~~~~~~--- 165 (345)
T 4h7p_A 97 AFDGVAIAIMCGAFPRKAGMER-KDLLEMNARIFKEQGEAIAAVAASDCRVVVVGNPANTNALI-------LLKSAQ--- 165 (345)
T ss_dssp HTTTCSEEEECCCCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHH-------HHHHTT---
T ss_pred HhCCCCEEEECCCCCCCCCCCH-HHHHHHhHHHHHHHHHHHHhhccCceEEEEeCCCcchHHHH-------HHHHcc---
Confidence 7899999999999765444444 4789999999999999987753 234566666531 110 000000
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCCC
Q 040253 150 LDFVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLTS 200 (338)
Q Consensus 150 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~~ 200 (338)
...+++..-+.+.+..-++-..++++.|+....++-..|.|..-..
T Consensus 166 -----g~~~~r~i~~~t~LDs~R~~~~la~~~~v~~~~V~~~~V~G~HG~t 211 (345)
T 4h7p_A 166 -----GKLNPRHVTAMTRLDHNRALSLLARKAGVPVSQVRNVIIWGNHSST 211 (345)
T ss_dssp -----TCSCGGGEEECCHHHHHHHHHHHHHHHTSCGGGEECCEEEBCSSTT
T ss_pred -----CCCCcceeeeccchhHHHHHHHHHHHHCcChhheecceeecCCCCe
Confidence 0112344455566666677777777778876666666667765443
No 375
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.64 E-value=3.7e-05 Score=70.39 Aligned_cols=74 Identities=14% Similarity=0.215 Sum_probs=61.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh-hCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP-IRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi 82 (338)
+.|+|+|.| .|-+|+++++.|.+.|++|++++++++....+... -++..+.||-++++.+.++ ++++|++|
T Consensus 2 ~~M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~-------~~~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 2 NAMKIIILG-AGQVGGTLAENLVGENNDITIVDKDGDRLRELQDK-------YDLRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH-------SSCEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred CcCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh-------cCcEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 468999998 69999999999999999999999987766655432 2578999999999988876 56899988
Q ss_pred Eec
Q 040253 83 HLA 85 (338)
Q Consensus 83 ~~a 85 (338)
-+.
T Consensus 74 a~t 76 (461)
T 4g65_A 74 AVT 76 (461)
T ss_dssp ECC
T ss_pred EEc
Confidence 543
No 376
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=97.62 E-value=7.5e-05 Score=68.13 Aligned_cols=81 Identities=16% Similarity=0.207 Sum_probs=53.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEE-E-----ecccCCCCCchhhhCCc
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTL-W-----KADLAEEGNFDEPIRGC 78 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~-----~~Dl~d~~~~~~~~~~~ 78 (338)
+|+|.|+| +|++|..++..|.+.|++|++++|+++..+.+..- ..+...+++.- + .+.+.-..++.++++++
T Consensus 2 ~mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g-~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~a 79 (450)
T 3gg2_A 2 SLDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSG-TIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEA 79 (450)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-CSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGC
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcC-CCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcC
Confidence 37999998 79999999999999999999999987766555431 11111111100 0 11122234556677889
Q ss_pred cEEEEeccc
Q 040253 79 TGVFHLATP 87 (338)
Q Consensus 79 d~vi~~a~~ 87 (338)
|+||-+...
T Consensus 80 DvViiaVpt 88 (450)
T 3gg2_A 80 DIIFIAVGT 88 (450)
T ss_dssp SEEEECCCC
T ss_pred CEEEEEcCC
Confidence 999988764
No 377
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.61 E-value=5.3e-05 Score=65.47 Aligned_cols=82 Identities=13% Similarity=0.125 Sum_probs=54.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
..++++|+|+ |-+|+.++..|.+.|. +|++++|+.+..++.+.+...-....++.....++.+.+++.+.+.++|+||
T Consensus 153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiII 231 (315)
T 3tnl_A 153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFT 231 (315)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEE
T ss_pred cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEE
Confidence 4689999996 8899999999999997 8999999843223322221100000112233345555555667778999999
Q ss_pred Eecc
Q 040253 83 HLAT 86 (338)
Q Consensus 83 ~~a~ 86 (338)
++..
T Consensus 232 NaTp 235 (315)
T 3tnl_A 232 NATG 235 (315)
T ss_dssp ECSS
T ss_pred ECcc
Confidence 9875
No 378
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.61 E-value=0.00045 Score=59.82 Aligned_cols=115 Identities=14% Similarity=0.123 Sum_probs=71.6
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC--CeEEEEEcCCCcHHHHHH-Hh-cCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG--YAVRATVRDPDNKKKVKH-LL-ELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
||+|.|+| +|.+|..++..|...| ++|.+++|+++....... +. ........+..... ++ +.++++|+
T Consensus 1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------d~-~~~~~aDv 72 (309)
T 1hyh_A 1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVIN------DW-AALADADV 72 (309)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEES------CG-GGGTTCSE
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEeC------CH-HHhCCCCE
Confidence 36999999 8999999999999998 799999998655444321 11 00000012222222 23 45778999
Q ss_pred EEEecccCCC----CCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 81 VFHLATPMDF----ESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 81 vi~~a~~~~~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
||-+++.... ..... .++...|+.....+++.+.+..+...++.+|.
T Consensus 73 Viiav~~~~~~~~~~g~~r-~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~tN 123 (309)
T 1hyh_A 73 VISTLGNIKLQQDNPTGDR-FAELKFTSSMVQSVGTNLKESGFHGVLVVISN 123 (309)
T ss_dssp EEECCSCGGGTC--------CTTHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred EEEecCCcccCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHHCCCcEEEEEcC
Confidence 9998874221 11111 24677888888888888877653345555443
No 379
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.61 E-value=0.00018 Score=62.55 Aligned_cols=118 Identities=13% Similarity=0.081 Sum_probs=74.1
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHHH-HHhcC-C--CCCCcEEEEecccCCCCCchhhh
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKVK-HLLEL-P--KASTHLTLWKADLAEEGNFDEPI 75 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~-~--~~~~~~~~~~~Dl~d~~~~~~~~ 75 (338)
|.. +++|.|+|+ |.+|+.++..|+..|+ +|.+++++++..+... .+... . ....++.. ..++ +++
T Consensus 1 M~~-~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-------t~d~-~a~ 70 (317)
T 2ewd_A 1 MIE-RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIG-------TDDY-ADI 70 (317)
T ss_dssp CCC-CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEE-------ESCG-GGG
T ss_pred CCC-CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEE-------CCCH-HHh
Confidence 443 578999997 9999999999999998 9999999876554421 11000 0 00011211 1223 567
Q ss_pred CCccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCc
Q 040253 76 RGCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSA 129 (338)
Q Consensus 76 ~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~ 129 (338)
+++|+||-+++......... .+....|......+++.+.+..+-..++.+|..
T Consensus 71 ~~aDiVi~avg~p~~~g~~r-~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sNp 123 (317)
T 2ewd_A 71 SGSDVVIITASIPGRPKDDR-SELLFGNARILDSVAEGVKKYCPNAFVICITNP 123 (317)
T ss_dssp TTCSEEEECCCCSSCCSSCG-GGGHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred CCCCEEEEeCCCCCCCCCcH-HHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCCh
Confidence 88999999997544222222 245566777777888877766534456666653
No 380
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=97.58 E-value=6.7e-05 Score=65.63 Aligned_cols=74 Identities=14% Similarity=0.026 Sum_probs=53.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh---h--CCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP---I--RGC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~---~--~~~ 78 (338)
..++|+|+||+|.+|..+++.+...|.+|++++|++++.+....+. .. ...|..+.+...++ . .++
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g--------~~-~~~~~~~~~~~~~~~~~~~~~~~ 210 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAG--------AW-QVINYREEDLVERLKEITGGKKV 210 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHT--------CS-EEEETTTSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC--------CC-EEEECCCccHHHHHHHHhCCCCc
Confidence 3689999999999999999999999999999999866555444321 11 12355554433332 2 269
Q ss_pred cEEEEecc
Q 040253 79 TGVFHLAT 86 (338)
Q Consensus 79 d~vi~~a~ 86 (338)
|+||+++|
T Consensus 211 D~vi~~~g 218 (327)
T 1qor_A 211 RVVYDSVG 218 (327)
T ss_dssp EEEEECSC
T ss_pred eEEEECCc
Confidence 99999998
No 381
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=97.58 E-value=0.001 Score=58.56 Aligned_cols=172 Identities=9% Similarity=0.045 Sum_probs=98.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC-----eEEEEEcCCCc-HHHH----HHHhcCCCCCCcEEEEecccCCCCCchhh
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY-----AVRATVRDPDN-KKKV----KHLLELPKASTHLTLWKADLAEEGNFDEP 74 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~-~~~~----~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 74 (338)
++||.|+||+|.||++++-.|+..+. .+.....+.+. .+.+ -++.... .+-...+.. . ....+.
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~--~p~~~~v~i--~--~~~y~~ 105 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL--YPLLREVSI--G--IDPYEV 105 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT--CTTEEEEEE--E--SCHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhh--hhhcCCcEE--e--cCCHHH
Confidence 57899999999999999999988752 26665554332 1111 1111110 011111111 1 123567
Q ss_pred hCCccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhC-CCccEEEEecCce---eeeccCCCCCCcCCCCCCch
Q 040253 75 IRGCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNA-KTVRRLVFTSSAG---TLDVEEHRKPVYDETSWSDL 150 (338)
Q Consensus 75 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~v~~Ss~~---v~~~~~~~~~~~~e~~~~~~ 150 (338)
++++|+||-+||.......+. .++++.|+...+.+.+.+.+. ++-..++.+|... +|-. .....
T Consensus 106 ~~daDvVVitag~prkpG~tR-~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsNPvD~~t~ia-------~k~sg---- 173 (375)
T 7mdh_A 106 FEDVDWALLIGAKPRGPGMER-AALLDINGQIFADQGKALNAVASKNVKVLVVGNPCNTNALIC-------LKNAP---- 173 (375)
T ss_dssp TTTCSEEEECCCCCCCTTCCH-HHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHH-------HHTCT----
T ss_pred hCCCCEEEEcCCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCchhHHHHHH-------HHHcC----
Confidence 889999999988644333333 378999999999999998874 4345677777531 1100 00000
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHHHHHHHcCccEEEEcCCceeCCCCC
Q 040253 151 DFVRSVKMTGWMYFVSKTLAEQAAWKFAEENNIDFISIIPSLVVGPFLT 199 (338)
Q Consensus 151 ~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~G~~~~ 199 (338)
..+++..-+.+.+..-++-..++++.|+....++--.|.|....
T Consensus 174 -----~~~~rvig~gT~LDsaR~r~~lA~~lgv~~~~V~~v~V~GeHgd 217 (375)
T 7mdh_A 174 -----DIPAKNFHALTRLDENRAKCQLALKAGVFYDKVSNVTIWGNHST 217 (375)
T ss_dssp -----TSCGGGEEECCHHHHHHHHHHHHHHTTSCGGGEECCEEEBCSST
T ss_pred -----CCCccEEEeeehHHHHHHHHHHHHHhCcChhhcccceEEecCCC
Confidence 01122233344555556666667777876555554467786543
No 382
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=97.56 E-value=0.0001 Score=64.94 Aligned_cols=75 Identities=20% Similarity=0.201 Sum_probs=53.5
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh-----CCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI-----RGC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~~ 78 (338)
..++|||+||+|-+|..+++.+...|.+|++++|++++.+.... .+ +.. ...|..+.+++.+.+ .++
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~--~~-----g~~-~~~d~~~~~~~~~~~~~~~~~~~ 226 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT--KF-----GFD-DAFNYKEESDLTAALKRCFPNGI 226 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--TS-----CCS-EEEETTSCSCSHHHHHHHCTTCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH--Hc-----CCc-eEEecCCHHHHHHHHHHHhCCCC
Confidence 35799999999999999999999999999999987655444431 11 111 123666554554433 269
Q ss_pred cEEEEecc
Q 040253 79 TGVFHLAT 86 (338)
Q Consensus 79 d~vi~~a~ 86 (338)
|+||++++
T Consensus 227 d~vi~~~g 234 (345)
T 2j3h_A 227 DIYFENVG 234 (345)
T ss_dssp EEEEESSC
T ss_pred cEEEECCC
Confidence 99999987
No 383
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=97.56 E-value=8.4e-05 Score=65.29 Aligned_cols=97 Identities=14% Similarity=0.095 Sum_probs=58.4
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHHHHHhcCCCCCCcEEE-EecccCCCCCchhhhCCccEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKVKHLLELPKASTHLTL-WKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
++||.|.||+|++|+.+++.|.+.+. +++.+.+..+...++.... +.+.- ....+.+.+ + +.++|+||
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~------~~~~g~~~~~~~~~~---~-~~~vDvV~ 73 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVH------PNLRGRTNLKFVPPE---K-LEPADILV 73 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTC------GGGTTTCCCBCBCGG---G-CCCCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhC------chhcCcccccccchh---H-hcCCCEEE
Confidence 57999999999999999999987764 7777766433322221110 11000 011122222 2 46899999
Q ss_pred EecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCce
Q 040253 83 HLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAG 130 (338)
Q Consensus 83 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~ 130 (338)
.+.+... +..++..+.+.| .++|-+|+..
T Consensus 74 ~a~g~~~-----------------s~~~a~~~~~aG--~~VId~Sa~~ 102 (345)
T 2ozp_A 74 LALPHGV-----------------FAREFDRYSALA--PVLVDLSADF 102 (345)
T ss_dssp ECCCTTH-----------------HHHTHHHHHTTC--SEEEECSSTT
T ss_pred EcCCcHH-----------------HHHHHHHHHHCC--CEEEEcCccc
Confidence 8876310 344555666677 4688888853
No 384
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=97.56 E-value=0.00012 Score=64.57 Aligned_cols=97 Identities=16% Similarity=0.117 Sum_probs=65.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCC---chhhh--CCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGN---FDEPI--RGC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~--~~~ 78 (338)
..++|||+||+|-+|..+++.+...|.+|++++|++++.+..+.+. ... ..|..+.+. +.++. .++
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g--------a~~-~~d~~~~~~~~~~~~~~~~~~~ 236 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALG--------ADE-TVNYTHPDWPKEVRRLTGGKGA 236 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT--------CSE-EEETTSTTHHHHHHHHTTTTCE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcC--------CCE-EEcCCcccHHHHHHHHhCCCCc
Confidence 3579999999999999999999999999999999876655554331 111 135554432 22222 269
Q ss_pred cEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCc
Q 040253 79 TGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSA 129 (338)
Q Consensus 79 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~ 129 (338)
|+||++++. . . ....++.++..| +++.+++.
T Consensus 237 d~vi~~~g~-~-----~-----------~~~~~~~l~~~G---~~v~~g~~ 267 (343)
T 2eih_A 237 DKVVDHTGA-L-----Y-----------FEGVIKATANGG---RIAIAGAS 267 (343)
T ss_dssp EEEEESSCS-S-----S-----------HHHHHHHEEEEE---EEEESSCC
T ss_pred eEEEECCCH-H-----H-----------HHHHHHhhccCC---EEEEEecC
Confidence 999999982 1 0 234555555544 78887763
No 385
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=97.55 E-value=9.7e-05 Score=65.25 Aligned_cols=98 Identities=15% Similarity=0.165 Sum_probs=59.2
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCC-CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERG-YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
++|.|.||+|++|+.+++.|.+.+ .++..+.+..+...++......- .+.. ..|+.-.+ .+.+.++|+||.+
T Consensus 17 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~---~~~v--~~dl~~~~--~~~~~~vDvVf~a 89 (359)
T 1xyg_A 17 IRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHL---RAQK--LPTLVSVK--DADFSTVDAVFCC 89 (359)
T ss_dssp EEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGG---TTSC--CCCCBCGG--GCCGGGCSEEEEC
T ss_pred cEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchh---cCcc--cccceecc--hhHhcCCCEEEEc
Confidence 689999999999999999999876 47777766443333333221100 0000 12332211 3345689999988
Q ss_pred cccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCce
Q 040253 85 ATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAG 130 (338)
Q Consensus 85 a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~ 130 (338)
.+... +...+..+ +.| .++|-.|+..
T Consensus 90 tp~~~-----------------s~~~a~~~-~aG--~~VId~sa~~ 115 (359)
T 1xyg_A 90 LPHGT-----------------TQEIIKEL-PTA--LKIVDLSADF 115 (359)
T ss_dssp CCTTT-----------------HHHHHHTS-CTT--CEEEECSSTT
T ss_pred CCchh-----------------HHHHHHHH-hCC--CEEEECCccc
Confidence 76311 24455556 666 4688888753
No 386
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=97.55 E-value=3.9e-05 Score=58.48 Aligned_cols=70 Identities=13% Similarity=0.205 Sum_probs=52.4
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
.++|+|+| +|.+|+.+++.|.+.|++|.+.+|+++....+.... ++ +....+++.+++.++|+||.+
T Consensus 21 ~~~v~iiG-~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~-------~~-----~~~~~~~~~~~~~~~Divi~a 87 (144)
T 3oj0_A 21 GNKILLVG-NGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY-------EY-----EYVLINDIDSLIKNNDVIITA 87 (144)
T ss_dssp CCEEEEEC-CSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH-------TC-----EEEECSCHHHHHHTCSEEEEC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh-------CC-----ceEeecCHHHHhcCCCEEEEe
Confidence 57999999 499999999999999988999999877655543321 11 222345566778899999998
Q ss_pred ccc
Q 040253 85 ATP 87 (338)
Q Consensus 85 a~~ 87 (338)
.+.
T Consensus 88 t~~ 90 (144)
T 3oj0_A 88 TSS 90 (144)
T ss_dssp SCC
T ss_pred CCC
Confidence 764
No 387
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=97.54 E-value=9.1e-05 Score=65.04 Aligned_cols=70 Identities=14% Similarity=0.100 Sum_probs=59.0
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh-hCCccEEEEe
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP-IRGCTGVFHL 84 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~~ 84 (338)
++|+|+|+ |.+|+.+++.|.+.|+ |.+++++++..+ ++. .++.++.+|.+|++.+.++ ++++|.|+-+
T Consensus 116 ~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~ 184 (336)
T 1lnq_A 116 RHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR--------SGANFVHGDPTRVSDLEKANVRGARAVIVD 184 (336)
T ss_dssp CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH--------TTCEEEESCTTSHHHHHHTCSTTEEEEEEC
T ss_pred CCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh--------CCcEEEEeCCCCHHHHHhcChhhccEEEEc
Confidence 47999995 9999999999999999 999988877655 433 4689999999999998877 7889999876
Q ss_pred cc
Q 040253 85 AT 86 (338)
Q Consensus 85 a~ 86 (338)
.+
T Consensus 185 ~~ 186 (336)
T 1lnq_A 185 LE 186 (336)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 388
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=97.54 E-value=9e-05 Score=64.98 Aligned_cols=75 Identities=15% Similarity=0.162 Sum_probs=53.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchh---hh--CCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDE---PI--RGC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---~~--~~~ 78 (338)
.+++|+|+||+|.+|..+++.+...|.+|++++|+++..+..+.+. .. ...|..+.+.... .. .++
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g--------~~-~~~d~~~~~~~~~i~~~~~~~~~ 215 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLG--------CH-HTINYSTQDFAEVVREITGGKGV 215 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHT--------CS-EEEETTTSCHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC--------CC-EEEECCCHHHHHHHHHHhCCCCC
Confidence 3579999999999999999999999999999999865555444321 11 1235555433222 22 269
Q ss_pred cEEEEeccc
Q 040253 79 TGVFHLATP 87 (338)
Q Consensus 79 d~vi~~a~~ 87 (338)
|+||+++|.
T Consensus 216 d~vi~~~g~ 224 (333)
T 1wly_A 216 DVVYDSIGK 224 (333)
T ss_dssp EEEEECSCT
T ss_pred eEEEECCcH
Confidence 999999983
No 389
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=97.53 E-value=6.7e-05 Score=66.27 Aligned_cols=83 Identities=16% Similarity=0.244 Sum_probs=53.7
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
|++++|+|.|+| +|.+|..++..|.+.|++|.+.+|+++..+.+......+...+++.. ...+.-..++.++++++|+
T Consensus 25 m~~~~mkI~VIG-aG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l-~~~i~~t~d~~ea~~~aDv 102 (356)
T 3k96_A 25 MEPFKHPIAILG-AGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPF-PETLKAYCDLKASLEGVTD 102 (356)
T ss_dssp --CCCSCEEEEC-CSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCC-CTTEEEESCHHHHHTTCCE
T ss_pred ccccCCeEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCcc-CCCeEEECCHHHHHhcCCE
Confidence 445568999998 69999999999999999999999987665555443221111122211 1111112345667888999
Q ss_pred EEEec
Q 040253 81 VFHLA 85 (338)
Q Consensus 81 vi~~a 85 (338)
||-+.
T Consensus 103 VilaV 107 (356)
T 3k96_A 103 ILIVV 107 (356)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 98664
No 390
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=97.52 E-value=0.00094 Score=58.02 Aligned_cols=115 Identities=17% Similarity=0.147 Sum_probs=70.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHH--HHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCcc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKK--KVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCT 79 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 79 (338)
++|+|.|+|+ |.+|..++..|...|+ +|.+++|+++... ..+.....+.. ....+... .+ .+.++++|
T Consensus 6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~-~~~~v~~~--~~----~~~~~~aD 77 (319)
T 1lld_A 6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFY-PTVSIDGS--DD----PEICRDAD 77 (319)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGS-TTCEEEEE--SC----GGGGTTCS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhhhc-CCeEEEeC--CC----HHHhCCCC
Confidence 4579999997 9999999999999998 9999999764433 11111111100 11122111 11 23567899
Q ss_pred EEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEec
Q 040253 80 GVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTS 127 (338)
Q Consensus 80 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 127 (338)
+||-+++.......+ ..++...|......+++.+....+...++.++
T Consensus 78 ~Vii~v~~~~~~g~~-r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~ 124 (319)
T 1lld_A 78 MVVITAGPRQKPGQS-RLELVGATVNILKAIMPNLVKVAPNAIYMLIT 124 (319)
T ss_dssp EEEECCCCCCCTTCC-HHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred EEEECCCCCCCCCCC-HHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence 999998744322222 23567778887888888777654234455443
No 391
>2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1
Probab=97.51 E-value=0.00025 Score=62.12 Aligned_cols=94 Identities=19% Similarity=0.203 Sum_probs=55.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC---eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY---AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGV 81 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 81 (338)
+++|+|.||+|++|+.+++.|.++++ ++..+.........+ .. .+......|+ +++. +.++|+|
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~----~~----~g~~i~~~~~-~~~~----~~~~DvV 72 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRM----GF----AESSLRVGDV-DSFD----FSSVGLA 72 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEE----EE----TTEEEECEEG-GGCC----GGGCSEE
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCcc----cc----CCcceEEecC-CHHH----hcCCCEE
Confidence 47899999999999999999997653 455554221110000 00 1111111122 2222 4589999
Q ss_pred EEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCce
Q 040253 82 FHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAG 130 (338)
Q Consensus 82 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~ 130 (338)
|.+.+. . .+..++..+.+.| + ++|.+|+..
T Consensus 73 ~~a~g~----------~-------~s~~~a~~~~~aG-~-kvId~Sa~~ 102 (340)
T 2hjs_A 73 FFAAAA----------E-------VSRAHAERARAAG-C-SVIDLSGAL 102 (340)
T ss_dssp EECSCH----------H-------HHHHHHHHHHHTT-C-EEEETTCTT
T ss_pred EEcCCc----------H-------HHHHHHHHHHHCC-C-EEEEeCCCC
Confidence 988762 1 1345666777777 4 478888764
No 392
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=97.50 E-value=0.00068 Score=58.93 Aligned_cols=113 Identities=14% Similarity=0.181 Sum_probs=72.1
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHHHHH-Hh-cCCCCCCcEEEEecccCCCCCchhhhCCccEE
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKKVKH-LL-ELPKASTHLTLWKADLAEEGNFDEPIRGCTGV 81 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 81 (338)
|+|.|+|+ |.+|+.++..|+..|+ +|.+++++++....... +. ..+.. ....+.. +| .+.++++|+|
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~-~~~~i~~---~d----~~~~~~aDvV 71 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFT-RRANIYA---GD----YADLKGSDVV 71 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGS-CCCEEEE---CC----GGGGTTCSEE
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhc-CCcEEEe---CC----HHHhCCCCEE
Confidence 58999997 9999999999999998 99999998654443321 11 00000 1112211 12 2456789999
Q ss_pred EEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 82 FHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 82 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
|-+++......... .++...|+.....+++.+.+..+-..+|.+|.
T Consensus 72 iiav~~~~~~g~~r-~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tN 117 (319)
T 1a5z_A 72 IVAAGVPQKPGETR-LQLLGRNARVMKEIARNVSKYAPDSIVIVVTN 117 (319)
T ss_dssp EECCCCCCCSSCCH-HHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EEccCCCCCCCCCH-HHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 99887544221122 35677788888888888877553345665544
No 393
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.50 E-value=0.00017 Score=61.28 Aligned_cols=73 Identities=14% Similarity=0.170 Sum_probs=50.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
..++++|+|+ |.+|+.++..|.+.|.+|++.+|+.++...+....... ..+ +..+.+++.+ .++|+||+
T Consensus 118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~---~~~-----~~~~~~~~~~--~~~DivVn 186 (271)
T 1nyt_A 118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT---GSI-----QALSMDELEG--HEFDLIIN 186 (271)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG---SSE-----EECCSGGGTT--CCCSEEEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc---CCe-----eEecHHHhcc--CCCCEEEE
Confidence 4689999998 67999999999999999999999876655544322110 112 1222222322 57999999
Q ss_pred eccc
Q 040253 84 LATP 87 (338)
Q Consensus 84 ~a~~ 87 (338)
+++.
T Consensus 187 ~t~~ 190 (271)
T 1nyt_A 187 ATSS 190 (271)
T ss_dssp CCSC
T ss_pred CCCC
Confidence 9975
No 394
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=97.49 E-value=0.00016 Score=62.76 Aligned_cols=74 Identities=18% Similarity=0.187 Sum_probs=49.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEE--------ecccCCCCCchhhh
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLW--------KADLAEEGNFDEPI 75 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--------~~Dl~d~~~~~~~~ 75 (338)
+||+|.|+| .|.+|+.++..|.+.|++|++++|+++..+.+... ++... ..+..+.+++.+.+
T Consensus 2 ~~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~--------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (316)
T 2ew2_A 2 NAMKIAIAG-AGAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKN--------GLIADFNGEEVVANLPIFSPEEIDHQN 72 (316)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHH--------CEEEEETTEEEEECCCEECGGGCCTTS
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhC--------CEEEEeCCCeeEecceeecchhhcccC
Confidence 357999998 59999999999999999999999987655544331 12221 12222333333445
Q ss_pred CCccEEEEecc
Q 040253 76 RGCTGVFHLAT 86 (338)
Q Consensus 76 ~~~d~vi~~a~ 86 (338)
+++|+||-+..
T Consensus 73 ~~~d~vi~~v~ 83 (316)
T 2ew2_A 73 EQVDLIIALTK 83 (316)
T ss_dssp CCCSEEEECSC
T ss_pred CCCCEEEEEec
Confidence 58999987764
No 395
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=97.48 E-value=0.00012 Score=64.77 Aligned_cols=75 Identities=11% Similarity=-0.011 Sum_probs=53.5
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchh---hh--CCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDE---PI--RGC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---~~--~~~ 78 (338)
.+++|+|+||+|-+|..+++.+...|.+|++++|++++.+..+.+. .. ...|..+.+...+ .. .++
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g--------~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLG--------AA-AGFNYKKEDFSEATLKFTKGAGV 232 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT--------CS-EEEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcC--------Cc-EEEecCChHHHHHHHHHhcCCCc
Confidence 3579999999999999999999999999999999876655544331 11 1235555433222 22 269
Q ss_pred cEEEEeccc
Q 040253 79 TGVFHLATP 87 (338)
Q Consensus 79 d~vi~~a~~ 87 (338)
|+||+++|.
T Consensus 233 d~vi~~~G~ 241 (354)
T 2j8z_A 233 NLILDCIGG 241 (354)
T ss_dssp EEEEESSCG
T ss_pred eEEEECCCc
Confidence 999999983
No 396
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=97.48 E-value=0.00012 Score=64.81 Aligned_cols=74 Identities=20% Similarity=0.147 Sum_probs=52.5
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchh---hhC--Cc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDE---PIR--GC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---~~~--~~ 78 (338)
..++|+|+||+|-+|..+++.+...|.+|++++|++++.+..+.+ +.. ...|..+.+...+ ... ++
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~--------ga~-~~~d~~~~~~~~~~~~~~~~~~~ 240 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN--------GAH-EVFNHREVNYIDKIKKYVGEKGI 240 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT--------TCS-EEEETTSTTHHHHHHHHHCTTCE
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHc--------CCC-EEEeCCCchHHHHHHHHcCCCCc
Confidence 357999999999999999999999999999999986655543332 111 1235555432222 222 69
Q ss_pred cEEEEecc
Q 040253 79 TGVFHLAT 86 (338)
Q Consensus 79 d~vi~~a~ 86 (338)
|+||+++|
T Consensus 241 D~vi~~~G 248 (351)
T 1yb5_A 241 DIIIEMLA 248 (351)
T ss_dssp EEEEESCH
T ss_pred EEEEECCC
Confidence 99999998
No 397
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=97.46 E-value=0.00012 Score=59.90 Aligned_cols=66 Identities=21% Similarity=0.282 Sum_probs=47.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
++|+|.|+| +|.+|+.+++.|.+.|++|.+.+|+++....+ .. .++... ++.++++++|+||.
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~---~~-----~g~~~~--------~~~~~~~~~DvVi~ 89 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARL---FP-----SAAQVT--------FQEEAVSSPEVIFV 89 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHH---SB-----TTSEEE--------EHHHHTTSCSEEEE
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH---HH-----cCCcee--------cHHHHHhCCCEEEE
Confidence 357899998 89999999999999999999999976543332 11 122221 34566778999998
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
+..
T Consensus 90 av~ 92 (215)
T 2vns_A 90 AVF 92 (215)
T ss_dssp CSC
T ss_pred CCC
Confidence 765
No 398
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=97.46 E-value=0.00076 Score=58.76 Aligned_cols=102 Identities=21% Similarity=0.145 Sum_probs=59.6
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHC-CCeEEEEEcCC---CcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLER-GYAVRATVRDP---DNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
|++|.|.||||++|..+++.|.+. +.++..+..+. .....+..............+... . +..++..++|+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~~~~~~~~v~~~--~---~~~~~~~~~Dv 78 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQLKGIVELPLQPM--S---DISEFSPGVDV 78 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGGTTTCCCBEEEE--S---SGGGTCTTCSE
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccccCccceeEecc--C---CHHHHhcCCCE
Confidence 689999999999999999999885 46777776544 333333322110000001111111 0 12233368999
Q ss_pred EEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCce
Q 040253 81 VFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAG 130 (338)
Q Consensus 81 vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~ 130 (338)
||.+.+. . .+..++..+.+.| .++|-.|+..
T Consensus 79 vf~a~p~----------~-------~s~~~~~~~~~~g--~~vIDlSa~f 109 (337)
T 3dr3_A 79 VFLATAH----------E-------VSHDLAPQFLEAG--CVVFDLSGAF 109 (337)
T ss_dssp EEECSCH----------H-------HHHHHHHHHHHTT--CEEEECSSTT
T ss_pred EEECCCh----------H-------HHHHHHHHHHHCC--CEEEEcCCcc
Confidence 9977652 1 0345555566667 4688888864
No 399
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=97.42 E-value=0.00011 Score=60.45 Aligned_cols=68 Identities=18% Similarity=0.134 Sum_probs=48.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEE-EEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRA-TVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
+||+|.|+| +|.+|..+++.|.+.|++|.+ .+|+++..+.+..... +.. ..+..+.++++|+||
T Consensus 22 ~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~g-------~~~-------~~~~~~~~~~aDvVi 86 (220)
T 4huj_A 22 SMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRFG-------ASV-------KAVELKDALQADVVI 86 (220)
T ss_dssp GSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHHT-------TTE-------EECCHHHHTTSSEEE
T ss_pred cCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHhC-------CCc-------ccChHHHHhcCCEEE
Confidence 468999999 999999999999999999998 7888776655433211 111 112234567899998
Q ss_pred Eecc
Q 040253 83 HLAT 86 (338)
Q Consensus 83 ~~a~ 86 (338)
-+..
T Consensus 87 lavp 90 (220)
T 4huj_A 87 LAVP 90 (220)
T ss_dssp EESC
T ss_pred EeCC
Confidence 7753
No 400
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=97.38 E-value=0.00016 Score=63.43 Aligned_cols=74 Identities=20% Similarity=0.176 Sum_probs=52.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHH-HHHhcCCCCCCcEEEEecccCCCCCchhhh----CCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKV-KHLLELPKASTHLTLWKADLAEEGNFDEPI----RGC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----~~~ 78 (338)
.+++|||+||+|-+|..+++.+...|.+|++++|++++.+.. +.+ ++. ...|..+.+....+. .++
T Consensus 149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~--------g~~-~~~~~~~~~~~~~~~~~~~~~~ 219 (336)
T 4b7c_A 149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEEL--------GFD-GAIDYKNEDLAAGLKRECPKGI 219 (336)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT--------CCS-EEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--------CCC-EEEECCCHHHHHHHHHhcCCCc
Confidence 468999999999999999999999999999999887665544 322 111 123554443222221 269
Q ss_pred cEEEEecc
Q 040253 79 TGVFHLAT 86 (338)
Q Consensus 79 d~vi~~a~ 86 (338)
|+||++++
T Consensus 220 d~vi~~~g 227 (336)
T 4b7c_A 220 DVFFDNVG 227 (336)
T ss_dssp EEEEESSC
T ss_pred eEEEECCC
Confidence 99999987
No 401
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=97.38 E-value=0.00024 Score=61.40 Aligned_cols=68 Identities=13% Similarity=0.016 Sum_probs=49.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
++|+|.|+| .|.+|..+++.|.+.|++|++.+|+++..+.+... ++... ..++.++++++|+||-
T Consensus 6 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~~~~------~~~~~e~~~~aDvvi~ 70 (303)
T 3g0o_A 6 TDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAE--------GACGA------AASAREFAGVVDALVI 70 (303)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--------TCSEE------ESSSTTTTTTCSEEEE
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc--------CCccc------cCCHHHHHhcCCEEEE
Confidence 467899997 89999999999999999999999987665554331 11111 2334556678899987
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
+..
T Consensus 71 ~vp 73 (303)
T 3g0o_A 71 LVV 73 (303)
T ss_dssp CCS
T ss_pred ECC
Confidence 764
No 402
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=97.35 E-value=0.00074 Score=59.53 Aligned_cols=94 Identities=14% Similarity=0.166 Sum_probs=63.9
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh------CCcc
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI------RGCT 79 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~------~~~d 79 (338)
++|+|+||+|-+|...++.+...|.+|+++++++++.+..+.+.. . .. .|..+. ++.+.+ .++|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga------~-~~--~~~~~~-~~~~~v~~~~~~~g~D 235 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGA------A-HV--LNEKAP-DFEATLREVMKAEQPR 235 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTC------S-EE--EETTST-THHHHHHHHHHHHCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC------C-EE--EECCcH-HHHHHHHHHhcCCCCc
Confidence 689999999999999999999999999999998877766655421 1 12 233332 233322 2799
Q ss_pred EEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCc
Q 040253 80 GVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSA 129 (338)
Q Consensus 80 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~ 129 (338)
+||++++. .. ....++.++..| +++.+++.
T Consensus 236 ~vid~~g~----------~~-------~~~~~~~l~~~G---~iv~~G~~ 265 (349)
T 3pi7_A 236 IFLDAVTG----------PL-------ASAIFNAMPKRA---RWIIYGRL 265 (349)
T ss_dssp EEEESSCH----------HH-------HHHHHHHSCTTC---EEEECCCS
T ss_pred EEEECCCC----------hh-------HHHHHhhhcCCC---EEEEEecc
Confidence 99999873 11 133455555444 78887753
No 403
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=97.34 E-value=0.00051 Score=57.46 Aligned_cols=103 Identities=18% Similarity=0.141 Sum_probs=64.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCC-------------------CcHHHHHH-HhcCCCCCCcEEEEec
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDP-------------------DNKKKVKH-LLELPKASTHLTLWKA 63 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~-~~~~~~~~~~~~~~~~ 63 (338)
.++|+|.| .|-+|+++++.|...|. ++++++++. .+.+.... +..... .-.++.+..
T Consensus 31 ~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np-~~~v~~~~~ 108 (249)
T 1jw9_B 31 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINP-HIAITPVNA 108 (249)
T ss_dssp HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCT-TSEEEEECS
T ss_pred CCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCC-CcEEEEEec
Confidence 46899998 68899999999999995 899999876 33333322 211110 124555665
Q ss_pred ccCCCCCchhhhCCccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 64 DLAEEGNFDEPIRGCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 64 Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
++++ +.+.+++.++|+||.+... . + .-..+.+++++.+ ++ +|+.+.
T Consensus 109 ~~~~-~~~~~~~~~~DvVi~~~d~--------~-~-------~~~~l~~~~~~~~-~p-~i~~~~ 154 (249)
T 1jw9_B 109 LLDD-AELAALIAEHDLVLDCTDN--------V-A-------VRNQLNAGCFAAK-VP-LVSGAA 154 (249)
T ss_dssp CCCH-HHHHHHHHTSSEEEECCSS--------H-H-------HHHHHHHHHHHHT-CC-EEEEEE
T ss_pred cCCH-hHHHHHHhCCCEEEEeCCC--------H-H-------HHHHHHHHHHHcC-CC-EEEeee
Confidence 5543 3455677899999987531 1 1 1234566677766 43 555543
No 404
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=97.33 E-value=0.00018 Score=63.65 Aligned_cols=72 Identities=18% Similarity=0.117 Sum_probs=50.7
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh----C-Ccc
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI----R-GCT 79 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----~-~~d 79 (338)
++|||+||+|-||..+++.+...|. +|++++++++..+..... + ++. ...|..+.+ +.+.+ . ++|
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~--~-----g~~-~~~d~~~~~-~~~~~~~~~~~~~d 232 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE--L-----GFD-AAINYKKDN-VAEQLRESCPAGVD 232 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT--S-----CCS-EEEETTTSC-HHHHHHHHCTTCEE
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH--c-----CCc-eEEecCchH-HHHHHHHhcCCCCC
Confidence 8999999999999999999999999 999999876554443321 1 111 123555533 22222 2 699
Q ss_pred EEEEecc
Q 040253 80 GVFHLAT 86 (338)
Q Consensus 80 ~vi~~a~ 86 (338)
+||+++|
T Consensus 233 ~vi~~~G 239 (357)
T 2zb4_A 233 VYFDNVG 239 (357)
T ss_dssp EEEESCC
T ss_pred EEEECCC
Confidence 9999998
No 405
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=97.33 E-value=0.0004 Score=61.62 Aligned_cols=97 Identities=16% Similarity=0.112 Sum_probs=64.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh-----CCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI-----RGC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~~ 78 (338)
.+++|||+||+|.+|..+++.+...|.+|+++++++++.+..+.+. +.. ..|..+. ++.+.+ .++
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~G--------a~~-~~~~~~~-~~~~~~~~~~~~g~ 232 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLG--------CDR-PINYKTE-PVGTVLKQEYPEGV 232 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT--------CSE-EEETTTS-CHHHHHHHHCTTCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcC--------CcE-EEecCCh-hHHHHHHHhcCCCC
Confidence 3579999999999999999999999999999998765555444321 111 1233332 233322 268
Q ss_pred cEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCce
Q 040253 79 TGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAG 130 (338)
Q Consensus 79 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~ 130 (338)
|+||++++. . .....++.++..| +++.+++..
T Consensus 233 D~vid~~g~----------~-------~~~~~~~~l~~~G---~iv~~g~~~ 264 (362)
T 2c0c_A 233 DVVYESVGG----------A-------MFDLAVDALATKG---RLIVIGFIS 264 (362)
T ss_dssp EEEEECSCT----------H-------HHHHHHHHEEEEE---EEEECCCGG
T ss_pred CEEEECCCH----------H-------HHHHHHHHHhcCC---EEEEEeCCC
Confidence 999999872 1 1234555555544 788887643
No 406
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=97.32 E-value=0.00038 Score=63.32 Aligned_cols=80 Identities=15% Similarity=0.172 Sum_probs=51.4
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEE-E-----ecccCCCCCchhhhCCcc
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTL-W-----KADLAEEGNFDEPIRGCT 79 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~-----~~Dl~d~~~~~~~~~~~d 79 (338)
|+|.|+| +|++|..++..|++.|++|++++|+++..+.+..-. .+...++.+. + .+.+....++.++++++|
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~-~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aD 78 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGK-SPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSD 78 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCS
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCC-CCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCC
Confidence 4899998 899999999999999999999999876655443210 1100011000 0 111222334556677899
Q ss_pred EEEEeccc
Q 040253 80 GVFHLATP 87 (338)
Q Consensus 80 ~vi~~a~~ 87 (338)
+||-+...
T Consensus 79 vviiaVpt 86 (436)
T 1mv8_A 79 VSFICVGT 86 (436)
T ss_dssp EEEECCCC
T ss_pred EEEEEcCC
Confidence 99988753
No 407
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.32 E-value=0.00045 Score=62.34 Aligned_cols=121 Identities=12% Similarity=0.076 Sum_probs=67.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEE------EecccCCCCCchhhhCC
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTL------WKADLAEEGNFDEPIRG 77 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~Dl~d~~~~~~~~~~ 77 (338)
.|.+|.|+| .||+|..++..|.+.|++|++++.++++.+.+..-. .+...++++- -.+.++-..+..+++..
T Consensus 20 ~m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~-~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~ 97 (444)
T 3vtf_A 20 HMASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGR-PHIYEPGLEEALGRALSSGRLSFAESAEEAVAA 97 (444)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHT
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCC-CCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhc
Confidence 467999997 999999999999999999999998876655543210 1111111100 01112222344566778
Q ss_pred ccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCc
Q 040253 78 CTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSA 129 (338)
Q Consensus 78 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~ 129 (338)
+|++|-+.+........+.-.+. ...+..+.+.++..++-.-+|+=||.
T Consensus 98 ad~~~I~VpTP~~~d~~~Dl~~v---~~a~~~I~~~l~~~~~g~lVV~eSTV 146 (444)
T 3vtf_A 98 TDATFIAVGTPPAPDGSADLRYV---EAAARAVGRGIRAKGRWHLVVVKSTV 146 (444)
T ss_dssp SSEEEECCCCCBCTTSSBCCHHH---HHHHHHHHHHHHHHCSCCEEEECSCC
T ss_pred CCceEEEecCCCCCCCCCCcHHH---HHHHHHHHHHHhhcCCCeEEEEeCCC
Confidence 89988777633221112211111 12234455555543312456666765
No 408
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=97.32 E-value=0.00026 Score=62.61 Aligned_cols=75 Identities=17% Similarity=0.103 Sum_probs=53.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh----CCcc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI----RGCT 79 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~----~~~d 79 (338)
..++|+|+||+|-+|..+++.+...|.+|++++|++++.+..+.+.. . .. .|..+.+....+. .++|
T Consensus 167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa------~-~~--~~~~~~~~~~~~~~~~~~g~D 237 (353)
T 4dup_A 167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGA------K-RG--INYRSEDFAAVIKAETGQGVD 237 (353)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC------S-EE--EETTTSCHHHHHHHHHSSCEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC------C-EE--EeCCchHHHHHHHHHhCCCce
Confidence 36799999999999999999999999999999998776665554321 1 11 2444433222222 2699
Q ss_pred EEEEeccc
Q 040253 80 GVFHLATP 87 (338)
Q Consensus 80 ~vi~~a~~ 87 (338)
+||++++.
T Consensus 238 vvid~~g~ 245 (353)
T 4dup_A 238 IILDMIGA 245 (353)
T ss_dssp EEEESCCG
T ss_pred EEEECCCH
Confidence 99999983
No 409
>3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A
Probab=97.32 E-value=0.00092 Score=58.87 Aligned_cols=94 Identities=21% Similarity=0.188 Sum_probs=53.8
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC---eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY---AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGV 81 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 81 (338)
+++|.|.||||++|..|++.|.++++ ++..+.-..+....+. . ......+...| . ..+.++|+|
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~----~--~~~~~~~~~~~---~----~~~~~~Dvv 68 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLK----F--KDQDITIEETT---E----TAFEGVDIA 68 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEE----E--TTEEEEEEECC---T----TTTTTCSEE
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcce----e--cCCCceEeeCC---H----HHhcCCCEE
Confidence 57999999999999999999888755 3333332211111000 0 00011111111 1 235689999
Q ss_pred EEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCce
Q 040253 82 FHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAG 130 (338)
Q Consensus 82 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~ 130 (338)
|.+.+. . .+..++..+.+.| .++|-.|+..
T Consensus 69 f~a~~~----------~-------~s~~~a~~~~~~G--~~vIDlSa~~ 98 (366)
T 3pwk_A 69 LFSAGS----------S-------TSAKYAPYAVKAG--VVVVDNTSYF 98 (366)
T ss_dssp EECSCH----------H-------HHHHHHHHHHHTT--CEEEECSSTT
T ss_pred EECCCh----------H-------hHHHHHHHHHHCC--CEEEEcCCcc
Confidence 988762 1 0345555566667 3688888864
No 410
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=97.30 E-value=0.0011 Score=57.12 Aligned_cols=114 Identities=18% Similarity=0.252 Sum_probs=73.9
Q ss_pred EEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHH-HHHhcC-CCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 7 TVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKV-KHLLEL-PKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
||.|+|| |.+|..++..|+..|. +|..++++.+..+.. .++... ........+.. ..++ ++++++|+||-
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~-----t~d~-~a~~~aD~Vi~ 73 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISG-----SNSY-EDMRGSDIVLV 73 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEE-----ESCG-GGGTTCSEEEE
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEE-----CCCH-HHhCCCCEEEE
Confidence 5899997 9999999999988786 699999987654331 111110 00001111221 1223 56889999999
Q ss_pred ecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 84 LATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 84 ~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
.++......... .++...|+.....+++.+.+..+-.++|.+|.
T Consensus 74 ~ag~~~k~G~~r-~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 74 TAGIGRKPGMTR-EQLLEANANTMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp CCSCCCCSSCCT-HHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred eCCCCCCCCCcH-HHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 988644322222 36688899999999999887653456776664
No 411
>4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A*
Probab=97.29 E-value=0.00049 Score=60.58 Aligned_cols=101 Identities=8% Similarity=0.051 Sum_probs=57.3
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC-CeEEEEEcCCCcHHHHHHHhcCCC--CCC----cEEEEecccCCCCCchhhhCC
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG-YAVRATVRDPDNKKKVKHLLELPK--AST----HLTLWKADLAEEGNFDEPIRG 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~--~~~----~~~~~~~Dl~d~~~~~~~~~~ 77 (338)
+++|.|.||||++|..|++.|.+.. .++..+....+....+........ ..+ ...+... +. ..+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~----~~~~~ 79 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DP----KLMDD 79 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CG----GGCTT
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC---CH----HHhcC
Confidence 5789999999999999999887764 366666544333333332211000 000 1111111 11 23468
Q ss_pred ccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCcee
Q 040253 78 CTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGT 131 (338)
Q Consensus 78 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v 131 (338)
+|+||.+.+... +..+...+.+.| .++|-.|+..-
T Consensus 80 vDvvf~a~p~~~-----------------s~~~a~~~~~~G--~~vIDlSa~~R 114 (359)
T 4dpk_A 80 VDIIFSPLPQGA-----------------AGPVEEQFAKEG--FPVISNSPDHR 114 (359)
T ss_dssp CCEEEECCCTTT-----------------HHHHHHHHHHTT--CEEEECSSTTT
T ss_pred CCEEEECCChHH-----------------HHHHHHHHHHCC--CEEEEcCCCcc
Confidence 999998876311 234555555667 46888888643
No 412
>4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A*
Probab=97.29 E-value=0.00049 Score=60.58 Aligned_cols=101 Identities=8% Similarity=0.051 Sum_probs=57.3
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC-CeEEEEEcCCCcHHHHHHHhcCCC--CCC----cEEEEecccCCCCCchhhhCC
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG-YAVRATVRDPDNKKKVKHLLELPK--AST----HLTLWKADLAEEGNFDEPIRG 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~--~~~----~~~~~~~Dl~d~~~~~~~~~~ 77 (338)
+++|.|.||||++|..|++.|.+.. .++..+....+....+........ ..+ ...+... +. ..+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~saGk~~~~~~p~~~~~~~~~~~~~~~v~~~---~~----~~~~~ 79 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPT---DP----KLMDD 79 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTTTTSBHHHHCCCCSSSCCCHHHHTCBCEEC---CG----GGCTT
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchhcCCChhHhcccccccccccccccceEEeC---CH----HHhcC
Confidence 5789999999999999999887764 366666544333333332211000 000 1111111 11 23468
Q ss_pred ccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCcee
Q 040253 78 CTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGT 131 (338)
Q Consensus 78 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~v 131 (338)
+|+||.+.+... +..+...+.+.| .++|-.|+..-
T Consensus 80 vDvvf~a~p~~~-----------------s~~~a~~~~~~G--~~vIDlSa~~R 114 (359)
T 4dpl_A 80 VDIIFSPLPQGA-----------------AGPVEEQFAKEG--FPVISNSPDHR 114 (359)
T ss_dssp CCEEEECCCTTT-----------------HHHHHHHHHHTT--CEEEECSSTTT
T ss_pred CCEEEECCChHH-----------------HHHHHHHHHHCC--CEEEEcCCCcc
Confidence 999998876311 234555555667 46888888643
No 413
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=97.29 E-value=0.0024 Score=54.88 Aligned_cols=111 Identities=12% Similarity=0.126 Sum_probs=71.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
++||.|+|| |.+|..++..|+.+|. +|..++++++......++.... .+++... .++ +.++++|+||
T Consensus 14 ~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~~~--~~~i~~t-------~d~-~~l~~aD~Vi 82 (303)
T 2i6t_A 14 VNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEIFN--LPNVEIS-------KDL-SASAHSKVVI 82 (303)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHHHT--CTTEEEE-------SCG-GGGTTCSEEE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhhhc--CCCeEEe-------CCH-HHHCCCCEEE
Confidence 579999995 9999999999999987 8999998764221222222111 1234331 223 5688999999
Q ss_pred EecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 83 HLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 83 ~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
-.++.. ..... -.++...|+.....+++.+.+..+-..++.+|.
T Consensus 83 ~aag~~-~pG~t-R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 83 FTVNSL-GSSQS-YLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ 126 (303)
T ss_dssp ECCCC-----CC-HHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred EcCCCC-CCCCC-HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 999763 22222 235677888888889888887653456666665
No 414
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=97.29 E-value=0.00051 Score=60.37 Aligned_cols=73 Identities=26% Similarity=0.201 Sum_probs=52.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchh----hhC--C
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDE----PIR--G 77 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~----~~~--~ 77 (338)
.+++|||+||+|-+|..+++.+...|.+|+++++++++.+..+.+.. . ..+ |.. +++.+ +.. +
T Consensus 159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga------~-~v~--~~~--~~~~~~v~~~~~~~g 227 (342)
T 4eye_A 159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGA------D-IVL--PLE--EGWAKAVREATGGAG 227 (342)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC------S-EEE--ESS--TTHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC------c-EEe--cCc--hhHHHHHHHHhCCCC
Confidence 36799999999999999999999999999999998877766655421 1 222 322 23332 222 6
Q ss_pred ccEEEEeccc
Q 040253 78 CTGVFHLATP 87 (338)
Q Consensus 78 ~d~vi~~a~~ 87 (338)
+|+||++++.
T Consensus 228 ~Dvvid~~g~ 237 (342)
T 4eye_A 228 VDMVVDPIGG 237 (342)
T ss_dssp EEEEEESCC-
T ss_pred ceEEEECCch
Confidence 9999999983
No 415
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=97.26 E-value=0.00029 Score=61.51 Aligned_cols=75 Identities=20% Similarity=0.203 Sum_probs=53.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchh---hh--CCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDE---PI--RGC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~---~~--~~~ 78 (338)
.+++|||+||+|-+|..+++.+...|.+|+++++++++.+..+.+.. . .. .|..+.+.... +. .++
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga------~-~~--~~~~~~~~~~~~~~~~~~~g~ 210 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGA------W-ET--IDYSHEDVAKRVLELTDGKKC 210 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC------S-EE--EETTTSCHHHHHHHHTTTCCE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC------C-EE--EeCCCccHHHHHHHHhCCCCc
Confidence 36799999999999999999999999999999998766655544321 1 11 24444332222 22 269
Q ss_pred cEEEEeccc
Q 040253 79 TGVFHLATP 87 (338)
Q Consensus 79 d~vi~~a~~ 87 (338)
|+||++++.
T Consensus 211 Dvvid~~g~ 219 (325)
T 3jyn_A 211 PVVYDGVGQ 219 (325)
T ss_dssp EEEEESSCG
T ss_pred eEEEECCCh
Confidence 999999883
No 416
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=97.25 E-value=0.00051 Score=60.35 Aligned_cols=75 Identities=12% Similarity=0.123 Sum_probs=54.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCch---hhh--CCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFD---EPI--RGC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~---~~~--~~~ 78 (338)
.+++|+|+||+|-+|..+++.+...|.+|+++++++++.+..+.+.. . .. .|..+.+... ++. .++
T Consensus 144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga------~-~~--~~~~~~~~~~~~~~~~~~~g~ 214 (340)
T 3gms_A 144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGA------A-YV--IDTSTAPLYETVMELTNGIGA 214 (340)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC------S-EE--EETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCC------c-EE--EeCCcccHHHHHHHHhCCCCC
Confidence 36799999999999999999998899999999999888776665421 1 11 2444433222 222 269
Q ss_pred cEEEEeccc
Q 040253 79 TGVFHLATP 87 (338)
Q Consensus 79 d~vi~~a~~ 87 (338)
|+||++++.
T Consensus 215 Dvvid~~g~ 223 (340)
T 3gms_A 215 DAAIDSIGG 223 (340)
T ss_dssp EEEEESSCH
T ss_pred cEEEECCCC
Confidence 999999983
No 417
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=97.25 E-value=0.00056 Score=58.80 Aligned_cols=67 Identities=22% Similarity=0.253 Sum_probs=45.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
|.+||-++| .|.+|..+++.|++.||+|++.+|++++.+.+.. .++. -.++..++++++|+||-
T Consensus 4 Ms~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~--------~G~~-------~~~s~~e~~~~~dvvi~ 67 (297)
T 4gbj_A 4 MSEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTK--------LGAT-------VVENAIDAITPGGIVFS 67 (297)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTT--------TTCE-------ECSSGGGGCCTTCEEEE
T ss_pred CCCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH--------cCCe-------EeCCHHHHHhcCCceee
Confidence 346899997 8999999999999999999999998776543321 1222 23456677888999997
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
+..
T Consensus 68 ~l~ 70 (297)
T 4gbj_A 68 VLA 70 (297)
T ss_dssp CCS
T ss_pred ecc
Confidence 764
No 418
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=97.24 E-value=0.00042 Score=59.64 Aligned_cols=38 Identities=21% Similarity=0.311 Sum_probs=33.6
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCC
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPD 40 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 40 (338)
+++++|.|+||.|.+|..+++.|.+.|++|.+++|++.
T Consensus 19 ~~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 19 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 34578999999999999999999999999999988653
No 419
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=97.24 E-value=0.00034 Score=61.25 Aligned_cols=96 Identities=17% Similarity=0.112 Sum_probs=63.5
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCch---hhh--CCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFD---EPI--RGC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~---~~~--~~~ 78 (338)
.+++|||+||+|-+|..+++.+...|.+|+++++++++.+..+.+. ... ..|..+.+... +.. .++
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g--------a~~-~~~~~~~~~~~~~~~~~~~~g~ 218 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYG--------AEY-LINASKEDILRQVLKFTNGKGV 218 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTT--------CSE-EEETTTSCHHHHHHHHTTTSCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcC--------CcE-EEeCCCchHHHHHHHHhCCCCc
Confidence 3679999999999999999999999999999999766655444321 111 12443433222 222 269
Q ss_pred cEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 79 TGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 79 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
|+||++++. .. ....++.++..| +++.++.
T Consensus 219 D~vid~~g~----------~~-------~~~~~~~l~~~G---~iv~~G~ 248 (334)
T 3qwb_A 219 DASFDSVGK----------DT-------FEISLAALKRKG---VFVSFGN 248 (334)
T ss_dssp EEEEECCGG----------GG-------HHHHHHHEEEEE---EEEECCC
T ss_pred eEEEECCCh----------HH-------HHHHHHHhccCC---EEEEEcC
Confidence 999999983 11 234455555544 7887765
No 420
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=97.23 E-value=0.00054 Score=60.47 Aligned_cols=34 Identities=24% Similarity=0.367 Sum_probs=29.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC-CeEEEEEcC
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG-YAVRATVRD 38 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~ 38 (338)
++||.|.||+|++|+.+++.|.+.+ .+|.++.++
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s 42 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAAS 42 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence 4699999999999999999998765 578888764
No 421
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=97.22 E-value=0.0047 Score=46.38 Aligned_cols=86 Identities=17% Similarity=0.297 Sum_probs=56.6
Q ss_pred CcEEEEeCCc---hhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEE
Q 040253 5 AETVCVTGAS---GFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGV 81 (338)
Q Consensus 5 ~~~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 81 (338)
.++|.|.|+| |.+|..+++.|++.|++|+.++++... + ..+.-..++.++.+.+|++
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~----------------i----~G~~~~~s~~el~~~vDlv 73 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE----------------I----EGLKCYRSVRELPKDVDVI 73 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE----------------E----TTEECBSSGGGSCTTCCEE
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCe----------------E----CCeeecCCHHHhCCCCCEE
Confidence 5789999987 999999999999999987666544211 1 1223344555556678988
Q ss_pred EEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 82 FHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 82 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
+-+... +. ...+++.+.+.+ ++.++..++
T Consensus 74 ii~vp~---------~~--------v~~v~~~~~~~g-~~~i~~~~~ 102 (138)
T 1y81_A 74 VFVVPP---------KV--------GLQVAKEAVEAG-FKKLWFQPG 102 (138)
T ss_dssp EECSCH---------HH--------HHHHHHHHHHTT-CCEEEECTT
T ss_pred EEEeCH---------HH--------HHHHHHHHHHcC-CCEEEEcCc
Confidence 866531 11 344555566677 666665553
No 422
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=97.22 E-value=0.00019 Score=63.68 Aligned_cols=74 Identities=11% Similarity=0.153 Sum_probs=54.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
.++|+|+|+ |-+|..+++.|...|.+|++++|++++.+....... ..+..+. .+.+++.+.+.++|+||++
T Consensus 167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~-----~~~~~~~---~~~~~~~~~~~~~DvVI~~ 237 (361)
T 1pjc_A 167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG-----SRVELLY---SNSAEIETAVAEADLLIGA 237 (361)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG-----GGSEEEE---CCHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC-----ceeEeee---CCHHHHHHHHcCCCEEEEC
Confidence 479999998 999999999999999999999998776665554332 1121211 2234455667789999999
Q ss_pred ccc
Q 040253 85 ATP 87 (338)
Q Consensus 85 a~~ 87 (338)
++.
T Consensus 238 ~~~ 240 (361)
T 1pjc_A 238 VLV 240 (361)
T ss_dssp CCC
T ss_pred CCc
Confidence 874
No 423
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=97.22 E-value=0.00073 Score=58.58 Aligned_cols=69 Identities=17% Similarity=0.221 Sum_probs=49.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchh-hhCCccE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDE-PIRGCTG 80 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~ 80 (338)
+.|+|.|+| .|.+|..+++.|.+.|+ +|++.+|+++..+..... ++. |- -..++.+ +++++|+
T Consensus 32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~--------G~~----~~-~~~~~~~~~~~~aDv 97 (314)
T 3ggo_A 32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL--------GII----DE-GTTSIAKVEDFSPDF 97 (314)
T ss_dssp SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT--------TSC----SE-EESCTTGGGGGCCSE
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC--------CCc----ch-hcCCHHHHhhccCCE
Confidence 458999998 89999999999999999 999999987655443321 110 00 0123445 6778999
Q ss_pred EEEecc
Q 040253 81 VFHLAT 86 (338)
Q Consensus 81 vi~~a~ 86 (338)
||-+..
T Consensus 98 Vilavp 103 (314)
T 3ggo_A 98 VMLSSP 103 (314)
T ss_dssp EEECSC
T ss_pred EEEeCC
Confidence 997764
No 424
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=97.19 E-value=0.00093 Score=59.30 Aligned_cols=70 Identities=14% Similarity=0.231 Sum_probs=50.7
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCC---CcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh---CCc
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDP---DNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI---RGC 78 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~---~~~ 78 (338)
+++|||+|| |-+|..+++.+...|.+|+++++++ ++.+..+.+ ++..+ | .+ +...++. .++
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~~~--------ga~~v--~-~~-~~~~~~~~~~~~~ 247 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEET--------KTNYY--N-SS-NGYDKLKDSVGKF 247 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHHHH--------TCEEE--E-CT-TCSHHHHHHHCCE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHHHh--------CCcee--c-hH-HHHHHHHHhCCCC
Confidence 689999999 9999999999999999999999987 544433332 23444 5 44 2222221 479
Q ss_pred cEEEEeccc
Q 040253 79 TGVFHLATP 87 (338)
Q Consensus 79 d~vi~~a~~ 87 (338)
|+||++++.
T Consensus 248 d~vid~~g~ 256 (366)
T 2cdc_A 248 DVIIDATGA 256 (366)
T ss_dssp EEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999983
No 425
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=97.19 E-value=0.00077 Score=56.89 Aligned_cols=74 Identities=14% Similarity=0.163 Sum_probs=46.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHC-CCeEEEE-EcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLER-GYAVRAT-VRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
|+||.|+|++|.+|+.+++.+.+. +.++.++ +|+.+.... ++.... .++. .++.-.+++.+++.++|+||
T Consensus 7 mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G-~d~gel----~g~~---~gv~v~~dl~~ll~~~DVVI 78 (272)
T 4f3y_A 7 SMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLG-QDAGAF----LGKQ---TGVALTDDIERVCAEADYLI 78 (272)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTT-SBTTTT----TTCC---CSCBCBCCHHHHHHHCSEEE
T ss_pred ccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCccccc-ccHHHH----hCCC---CCceecCCHHHHhcCCCEEE
Confidence 689999999999999999999876 5676664 554321100 000000 0000 02333456677777899999
Q ss_pred Eecc
Q 040253 83 HLAT 86 (338)
Q Consensus 83 ~~a~ 86 (338)
++..
T Consensus 79 DfT~ 82 (272)
T 4f3y_A 79 DFTL 82 (272)
T ss_dssp ECSC
T ss_pred EcCC
Confidence 9864
No 426
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=97.19 E-value=0.00039 Score=59.80 Aligned_cols=65 Identities=11% Similarity=-0.003 Sum_probs=50.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
+|+|.|+| .|.+|..+++.|.+.|++|++.+|+++..+.+... ++. -..++.++++ +|+||-+
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~~-------~~~~~~~~~~-aDvvi~~ 77 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA--------GAT-------LADSVADVAA-ADLIHIT 77 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT--------TCE-------ECSSHHHHTT-SSEEEEC
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC--------CCE-------EcCCHHHHHh-CCEEEEE
Confidence 46899997 89999999999999999999999998876655431 222 2345667777 9999977
Q ss_pred cc
Q 040253 85 AT 86 (338)
Q Consensus 85 a~ 86 (338)
..
T Consensus 78 vp 79 (296)
T 3qha_A 78 VL 79 (296)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 427
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=97.18 E-value=0.0012 Score=59.75 Aligned_cols=95 Identities=8% Similarity=0.181 Sum_probs=63.8
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC-C---eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCC---CCchhhhCC
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG-Y---AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEE---GNFDEPIRG 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~~~~~~~ 77 (338)
.++|+|+| .|-||+.+++.|.++. . +|++++......+..+.. ++.+...++++. +.+.+++++
T Consensus 13 ~~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~~~--------g~~~~~~~Vdadnv~~~l~aLl~~ 83 (480)
T 2ph5_A 13 KNRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQQY--------GVSFKLQQITPQNYLEVIGSTLEE 83 (480)
T ss_dssp CSCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHHHH--------TCEEEECCCCTTTHHHHTGGGCCT
T ss_pred CCCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHhhc--------CCceeEEeccchhHHHHHHHHhcC
Confidence 47899999 9999999999998864 4 688888755432222211 335555555433 335667776
Q ss_pred ccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCc
Q 040253 78 CTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSA 129 (338)
Q Consensus 78 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~ 129 (338)
.|+|||++-. . . ...++++|.+.| +-|++++
T Consensus 84 ~DvVIN~s~~--------~-~--------~l~Im~acleaG----v~YlDTa 114 (480)
T 2ph5_A 84 NDFLIDVSIG--------I-S--------SLALIILCNQKG----ALYINAA 114 (480)
T ss_dssp TCEEEECCSS--------S-C--------HHHHHHHHHHHT----CEEEESS
T ss_pred CCEEEECCcc--------c-c--------CHHHHHHHHHcC----CCEEECC
Confidence 7999986532 1 1 467999999998 4466665
No 428
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=97.17 E-value=0.00052 Score=60.47 Aligned_cols=75 Identities=15% Similarity=0.171 Sum_probs=53.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHC-CCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCC---chhhh--CC
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLER-GYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGN---FDEPI--RG 77 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~--~~ 77 (338)
..++|+|+||+|-+|..+++.+... |.+|+++++++++.+..+.+. .. ...|..+.+. +.++. .+
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g--------~~-~~~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAG--------AD-YVINASMQDPLAEIRRITESKG 240 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHT--------CS-EEEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhC--------CC-EEecCCCccHHHHHHHHhcCCC
Confidence 3579999999999999999999998 999999998876655544331 11 1135545433 33333 36
Q ss_pred ccEEEEeccc
Q 040253 78 CTGVFHLATP 87 (338)
Q Consensus 78 ~d~vi~~a~~ 87 (338)
+|+||++++.
T Consensus 241 ~d~vi~~~g~ 250 (347)
T 1jvb_A 241 VDAVIDLNNS 250 (347)
T ss_dssp EEEEEESCCC
T ss_pred ceEEEECCCC
Confidence 9999999983
No 429
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=97.16 E-value=0.0005 Score=59.27 Aligned_cols=67 Identities=13% Similarity=0.220 Sum_probs=50.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
.||+|.|+| .|.+|..+++.|.+.|++|++.+|+++..+.+.. .++ .-..+..++++++|+||-
T Consensus 2 ~m~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~--------~g~-------~~~~~~~~~~~~aDvvi~ 65 (302)
T 2h78_A 2 HMKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA--------AGA-------SAARSARDAVQGADVVIS 65 (302)
T ss_dssp -CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH--------TTC-------EECSSHHHHHTTCSEEEE
T ss_pred CCCEEEEEe-ecHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH--------CCC-------eEcCCHHHHHhCCCeEEE
Confidence 368999997 7999999999999999999999998766554432 122 123456677888999997
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
+..
T Consensus 66 ~vp 68 (302)
T 2h78_A 66 MLP 68 (302)
T ss_dssp CCS
T ss_pred ECC
Confidence 764
No 430
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.15 E-value=0.00043 Score=58.94 Aligned_cols=78 Identities=14% Similarity=0.236 Sum_probs=54.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
..++++|+|+ |-+|+.++..|.+.|. +|++++|+.++...+........ +.+.+... +.+++.+.+.++|+||
T Consensus 126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~--~~~~i~~~---~~~~l~~~l~~~DiVI 199 (283)
T 3jyo_A 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV--GREAVVGV---DARGIEDVIAAADGVV 199 (283)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHH--TSCCEEEE---CSTTHHHHHHHSSEEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhc--CCceEEEc---CHHHHHHHHhcCCEEE
Confidence 4689999997 8899999999999997 79999998776655533221000 11222222 2345667777899999
Q ss_pred Eeccc
Q 040253 83 HLATP 87 (338)
Q Consensus 83 ~~a~~ 87 (338)
++...
T Consensus 200 naTp~ 204 (283)
T 3jyo_A 200 NATPM 204 (283)
T ss_dssp ECSST
T ss_pred ECCCC
Confidence 98753
No 431
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=97.14 E-value=0.00035 Score=60.76 Aligned_cols=69 Identities=17% Similarity=0.026 Sum_probs=48.8
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCC-CeEEEEEcCCC---cH-HHHHHHhcCCCCCCcEEEEecccCCCC-CchhhhC
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERG-YAVRATVRDPD---NK-KKVKHLLELPKASTHLTLWKADLAEEG-NFDEPIR 76 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~r~~~---~~-~~~~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~~~~ 76 (338)
+|+|+|.|+| .|.+|..+++.|++.| ++|++.+|+++ .. ...+.+.. .++ .. +..++++
T Consensus 22 ~M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~-----~g~---------~~~s~~e~~~ 86 (317)
T 4ezb_A 22 SMMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAE-----LGV---------EPLDDVAGIA 86 (317)
T ss_dssp TSCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHH-----TTC---------EEESSGGGGG
T ss_pred ccCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHH-----CCC---------CCCCHHHHHh
Confidence 3568999998 8999999999999999 99999999862 11 11122111 122 23 4556777
Q ss_pred CccEEEEecc
Q 040253 77 GCTGVFHLAT 86 (338)
Q Consensus 77 ~~d~vi~~a~ 86 (338)
++|+||-+..
T Consensus 87 ~aDvVi~avp 96 (317)
T 4ezb_A 87 CADVVLSLVV 96 (317)
T ss_dssp GCSEEEECCC
T ss_pred cCCEEEEecC
Confidence 8999987764
No 432
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=97.14 E-value=0.0006 Score=59.05 Aligned_cols=67 Identities=19% Similarity=0.233 Sum_probs=51.5
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
.||+|.|+| .|.+|..+++.|.+.|++|++.+|+++..+.+... ++. -..++.++++++|+||-
T Consensus 20 ~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~--------g~~-------~~~~~~~~~~~aDvvi~ 83 (310)
T 3doj_A 20 HMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEH--------GAS-------VCESPAEVIKKCKYTIA 83 (310)
T ss_dssp CSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT--------TCE-------ECSSHHHHHHHCSEEEE
T ss_pred cCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC--------CCe-------EcCCHHHHHHhCCEEEE
Confidence 468999997 89999999999999999999999988776655431 221 13455667778899987
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
+..
T Consensus 84 ~vp 86 (310)
T 3doj_A 84 MLS 86 (310)
T ss_dssp CCS
T ss_pred EcC
Confidence 654
No 433
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=97.11 E-value=0.0017 Score=59.45 Aligned_cols=36 Identities=17% Similarity=0.277 Sum_probs=33.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHC-CC-eEEEEEcCCC
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLER-GY-AVRATVRDPD 40 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~-g~-~V~~~~r~~~ 40 (338)
.+|+|.|+| +|++|..++..|++. |+ +|++++|+++
T Consensus 17 ~~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 357999997 899999999999999 99 9999999987
No 434
>2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C*
Probab=97.11 E-value=0.0013 Score=57.51 Aligned_cols=94 Identities=17% Similarity=0.090 Sum_probs=56.3
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC---CeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG---YAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGV 81 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 81 (338)
|++|.|.||+|++|+.+++.|.+++ .++..+....+....+ . .....+.+ .|+ +++ .+.++|+|
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~----~--~~~~~i~~--~~~-~~~----~~~~vDvV 69 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTY----R--FNGKTVRV--QNV-EEF----DWSQVHIA 69 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEE----E--ETTEEEEE--EEG-GGC----CGGGCSEE
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCce----e--ecCceeEE--ecC-ChH----HhcCCCEE
Confidence 6899999999999999999999873 4666665321110000 0 00012222 222 222 23579999
Q ss_pred EEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCce
Q 040253 82 FHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAG 130 (338)
Q Consensus 82 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~~ 130 (338)
|-+.+. . .+...+..+.+.| + ++|-.|+..
T Consensus 70 f~a~g~----------~-------~s~~~a~~~~~~G-~-~vId~s~~~ 99 (336)
T 2r00_A 70 LFSAGG----------E-------LSAKWAPIAAEAG-V-VVIDNTSHF 99 (336)
T ss_dssp EECSCH----------H-------HHHHHHHHHHHTT-C-EEEECSSTT
T ss_pred EECCCc----------h-------HHHHHHHHHHHcC-C-EEEEcCCcc
Confidence 988762 1 1345566666777 4 688888764
No 435
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=97.11 E-value=0.00043 Score=59.71 Aligned_cols=73 Identities=22% Similarity=0.141 Sum_probs=52.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
.+.+|+|+||+|-+|..+++.+...|.+|+++++++++.+..+.+. ... ..|..+.+++.+.+.++|+||+
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g--------a~~-~~~~~~~~~~~~~~~~~d~vid 195 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALG--------AEE-AATYAEVPERAKAWGGLDLVLE 195 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTT--------CSE-EEEGGGHHHHHHHTTSEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcC--------CCE-EEECCcchhHHHHhcCceEEEE
Confidence 3579999999999999999999999999999999877665554321 111 1243331223334478999999
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
++
T Consensus 196 -~g 197 (302)
T 1iz0_A 196 -VR 197 (302)
T ss_dssp -CS
T ss_pred -CC
Confidence 87
No 436
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.11 E-value=0.00032 Score=60.51 Aligned_cols=83 Identities=17% Similarity=0.139 Sum_probs=51.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
..++++|+|+ |-.|+.++..|.+.|. +|++++|+.+..++.+.+...-....+......++.+.+.+.+.+.++|+||
T Consensus 147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~~DiII 225 (312)
T 3t4e_A 147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALASADILT 225 (312)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHHCSEEE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccCceEEE
Confidence 4689999996 8899999999999997 8999999944333322221100000112222233333222345567899999
Q ss_pred Eeccc
Q 040253 83 HLATP 87 (338)
Q Consensus 83 ~~a~~ 87 (338)
++...
T Consensus 226 NaTp~ 230 (312)
T 3t4e_A 226 NGTKV 230 (312)
T ss_dssp ECSST
T ss_pred ECCcC
Confidence 98753
No 437
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=97.10 E-value=0.0015 Score=57.54 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=27.6
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCC-CeEEEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERG-YAVRATV 36 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g-~~V~~~~ 36 (338)
++||.|.||+|++|+.+++.|.+.. .++..+.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~ 36 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS 36 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence 5799999999999999999998764 4777775
No 438
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=97.09 E-value=0.00061 Score=61.38 Aligned_cols=80 Identities=10% Similarity=0.101 Sum_probs=50.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEE-E---ecccCCCCCchhhhCCcc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTL-W---KADLAEEGNFDEPIRGCT 79 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~---~~Dl~d~~~~~~~~~~~d 79 (338)
.+|+|.|+| +|++|..++..|.+ |++|++++|+++..+.+..-. .+...++++- + .+.+.-..++.++++++|
T Consensus 35 ~~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~-~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aD 111 (432)
T 3pid_A 35 EFMKITISG-TGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKI-SPIVDKEIQEYLAEKPLNFRATTDKHDAYRNAD 111 (432)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTC-CSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCS
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccC-CccccccHHHHHhhccCCeEEEcCHHHHHhCCC
Confidence 357999998 79999999999887 999999999877655543310 0100011000 0 011222344567788999
Q ss_pred EEEEecc
Q 040253 80 GVFHLAT 86 (338)
Q Consensus 80 ~vi~~a~ 86 (338)
+||-+..
T Consensus 112 vViiaVP 118 (432)
T 3pid_A 112 YVIIATP 118 (432)
T ss_dssp EEEECCC
T ss_pred EEEEeCC
Confidence 9987654
No 439
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=97.08 E-value=0.0011 Score=58.44 Aligned_cols=74 Identities=15% Similarity=0.092 Sum_probs=50.6
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEec------cc-CCCCCchhhhCC
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKA------DL-AEEGNFDEPIRG 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------Dl-~d~~~~~~~~~~ 77 (338)
+|+|.|+| +|.+|+.++..|.+.|++|.+++|+++..+.+.... .+.+... .+ ....++.+++.+
T Consensus 4 ~mki~iiG-~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (359)
T 1bg6_A 4 SKTYAVLG-LGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG-------AIIAEGPGLAGTAHPDLLTSDIGLAVKD 75 (359)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT-------SEEEESSSCCEEECCSEEESCHHHHHTT
T ss_pred cCeEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcC-------CeEEeccccccccccceecCCHHHHHhc
Confidence 47999998 599999999999999999999999876655544321 1111111 11 012345566778
Q ss_pred ccEEEEecc
Q 040253 78 CTGVFHLAT 86 (338)
Q Consensus 78 ~d~vi~~a~ 86 (338)
+|+||-+..
T Consensus 76 ~D~vi~~v~ 84 (359)
T 1bg6_A 76 ADVILIVVP 84 (359)
T ss_dssp CSEEEECSC
T ss_pred CCEEEEeCC
Confidence 999998774
No 440
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=97.08 E-value=0.00046 Score=59.07 Aligned_cols=66 Identities=18% Similarity=0.258 Sum_probs=50.7
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
||+|.|+| .|.+|..+++.|.+.|++|++.+|+++..+.+... ++. -..+..++++++|+||-+
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~~-------~~~~~~~~~~~advvi~~ 64 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL--------GAR-------QASSPAEVCAACDITIAM 64 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH--------TCE-------ECSCHHHHHHHCSEEEEC
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC--------CCe-------ecCCHHHHHHcCCEEEEE
Confidence 46899997 89999999999999999999999998776655432 111 123456677788999877
Q ss_pred cc
Q 040253 85 AT 86 (338)
Q Consensus 85 a~ 86 (338)
..
T Consensus 65 v~ 66 (287)
T 3pdu_A 65 LA 66 (287)
T ss_dssp CS
T ss_pred cC
Confidence 64
No 441
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.07 E-value=0.0002 Score=61.40 Aligned_cols=78 Identities=8% Similarity=0.058 Sum_probs=50.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
..++++|+|++ -+|+.++..|++.| +|++.+|+.++...+......... .. ..+.+|+.+ +.+.+.++|+||+
T Consensus 127 ~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~-~~-~~~~~d~~~---~~~~~~~~DilVn 199 (287)
T 1nvt_A 127 KDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLN-KK-FGEEVKFSG---LDVDLDGVDIIIN 199 (287)
T ss_dssp CSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHT-CC-HHHHEEEEC---TTCCCTTCCEEEE
T ss_pred CCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcc-cc-cceeEEEee---HHHhhCCCCEEEE
Confidence 46899999975 99999999999999 999999986654444322110000 00 001223333 2445668999999
Q ss_pred ecccC
Q 040253 84 LATPM 88 (338)
Q Consensus 84 ~a~~~ 88 (338)
+++..
T Consensus 200 ~ag~~ 204 (287)
T 1nvt_A 200 ATPIG 204 (287)
T ss_dssp CSCTT
T ss_pred CCCCC
Confidence 99853
No 442
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=97.06 E-value=0.00021 Score=61.48 Aligned_cols=75 Identities=9% Similarity=0.042 Sum_probs=52.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
..++|+|+|+ |.+|+.++..|.+.|. +|++.+|+.++...+....... .. +..+.+++.+.+.++|+||
T Consensus 140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~---~~------~~~~~~~~~~~~~~aDivI 209 (297)
T 2egg_A 140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDER---RS------AYFSLAEAETRLAEYDIII 209 (297)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSS---SC------CEECHHHHHHTGGGCSEEE
T ss_pred CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhc---cC------ceeeHHHHHhhhccCCEEE
Confidence 4689999996 7799999999999997 9999999876655544322110 00 1112234556677899999
Q ss_pred EecccC
Q 040253 83 HLATPM 88 (338)
Q Consensus 83 ~~a~~~ 88 (338)
++.+..
T Consensus 210 n~t~~~ 215 (297)
T 2egg_A 210 NTTSVG 215 (297)
T ss_dssp ECSCTT
T ss_pred ECCCCC
Confidence 999753
No 443
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=97.05 E-value=0.001 Score=58.65 Aligned_cols=95 Identities=18% Similarity=0.168 Sum_probs=61.3
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCC---chhhh--CCc
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGN---FDEPI--RGC 78 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~---~~~~~--~~~ 78 (338)
..+|||+|+ |-+|..+++.+...|. +|++++|++++.+..+.+. +.. ..|..+.+. +.++. .++
T Consensus 168 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~G--------a~~-~~~~~~~~~~~~v~~~~~g~g~ 237 (348)
T 2d8a_A 168 GKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVG--------ADY-VINPFEEDVVKEVMDITDGNGV 237 (348)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHT--------CSE-EECTTTSCHHHHHHHHTTTSCE
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhC--------CCE-EECCCCcCHHHHHHHHcCCCCC
Confidence 578999999 9999999999999998 9999998866555444332 111 124443322 22222 269
Q ss_pred cEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecC
Q 040253 79 TGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSS 128 (338)
Q Consensus 79 d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss 128 (338)
|+||++++. . . .....++.++..+ +++.+++
T Consensus 238 D~vid~~g~-------~--~-------~~~~~~~~l~~~G---~iv~~g~ 268 (348)
T 2d8a_A 238 DVFLEFSGA-------P--K-------ALEQGLQAVTPAG---RVSLLGL 268 (348)
T ss_dssp EEEEECSCC-------H--H-------HHHHHHHHEEEEE---EEEECCC
T ss_pred CEEEECCCC-------H--H-------HHHHHHHHHhcCC---EEEEEcc
Confidence 999999873 0 1 1234455555444 7887775
No 444
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=97.04 E-value=0.00055 Score=57.60 Aligned_cols=68 Identities=16% Similarity=0.094 Sum_probs=49.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
+||+|.|+| +|.+|+.+++.|.+.|++|.+.+|+++....+.... + +.-..++.++++++|+||-
T Consensus 2 ~~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~-------g-------~~~~~~~~~~~~~~D~Vi~ 66 (259)
T 2ahr_A 2 NAMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL-------A-------LPYAMSHQDLIDQVDLVIL 66 (259)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH-------T-------CCBCSSHHHHHHTCSEEEE
T ss_pred CccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc-------C-------CEeeCCHHHHHhcCCEEEE
Confidence 467999998 899999999999999999999988866554443211 1 1112345566778999997
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
+..
T Consensus 67 ~v~ 69 (259)
T 2ahr_A 67 GIK 69 (259)
T ss_dssp CSC
T ss_pred EeC
Confidence 764
No 445
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=97.03 E-value=0.0017 Score=53.81 Aligned_cols=34 Identities=15% Similarity=0.233 Sum_probs=27.7
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEE-EcCC
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRAT-VRDP 39 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~-~r~~ 39 (338)
|+||.|+|+ |.+|+.+++.+.+.+.++.+. +|+.
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~ 37 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTP 37 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSC
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCc
Confidence 689999999 999999999999887666653 4443
No 446
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=97.01 E-value=0.00087 Score=57.63 Aligned_cols=67 Identities=13% Similarity=0.211 Sum_probs=51.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
.|+||-++| .|..|..++++|++.||+|++.+|++++.+.+... ++ .-.++..++.+++|+||-
T Consensus 2 ~M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~--------Ga-------~~a~s~~e~~~~~dvv~~ 65 (300)
T 3obb_A 2 HMKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA--------GA-------SAARSARDAVQGADVVIS 65 (300)
T ss_dssp -CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT--------TC-------EECSSHHHHHTTCSEEEE
T ss_pred CcCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHc--------CC-------EEcCCHHHHHhcCCceee
Confidence 368999998 99999999999999999999999987776655431 21 123456677888899887
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
|..
T Consensus 66 ~l~ 68 (300)
T 3obb_A 66 MLP 68 (300)
T ss_dssp CCS
T ss_pred cCC
Confidence 764
No 447
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.98 E-value=0.00091 Score=58.18 Aligned_cols=67 Identities=22% Similarity=0.267 Sum_probs=50.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
.+|+|.|+| .|.+|..+++.|.+.|++|.+.+|+++..+.+.. .++. -..++.++++++|+||-
T Consensus 30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~--------~g~~-------~~~~~~e~~~~aDvVi~ 93 (320)
T 4dll_A 30 YARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAA--------LGAT-------IHEQARAAARDADIVVS 93 (320)
T ss_dssp CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT--------TTCE-------EESSHHHHHTTCSEEEE
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH--------CCCE-------eeCCHHHHHhcCCEEEE
Confidence 357999997 7999999999999999999999998766554432 1221 23456677888999987
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
+..
T Consensus 94 ~vp 96 (320)
T 4dll_A 94 MLE 96 (320)
T ss_dssp CCS
T ss_pred ECC
Confidence 654
No 448
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=96.98 E-value=0.0012 Score=55.92 Aligned_cols=73 Identities=12% Similarity=0.131 Sum_probs=50.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
..++|+|+|+ |.+|+.++..|++.|.+|++.+|+.++...+....... ..+.. .|+ +++.+ .++|+||+
T Consensus 118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~---~~~~~--~~~---~~~~~--~~~DivIn 186 (272)
T 1p77_A 118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY---GNIQA--VSM---DSIPL--QTYDLVIN 186 (272)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG---SCEEE--EEG---GGCCC--SCCSEEEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc---CCeEE--eeH---HHhcc--CCCCEEEE
Confidence 4689999997 77999999999999999999999877665554332110 12222 222 11111 37899999
Q ss_pred eccc
Q 040253 84 LATP 87 (338)
Q Consensus 84 ~a~~ 87 (338)
+++.
T Consensus 187 ~t~~ 190 (272)
T 1p77_A 187 ATSA 190 (272)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9974
No 449
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=96.97 E-value=0.00034 Score=62.37 Aligned_cols=75 Identities=13% Similarity=0.072 Sum_probs=53.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
.+++|+|+|+ |-+|..+++.+...|.+|++++|+++..+....... ..+. .+..+.+++.+++.++|+||.
T Consensus 167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g-----~~~~---~~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFC-----GRIH---TRYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT-----TSSE---EEECCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcC-----CeeE---eccCCHHHHHHHHcCCCEEEE
Confidence 3689999997 999999999999999999999998766554443221 1111 122233456677778999999
Q ss_pred eccc
Q 040253 84 LATP 87 (338)
Q Consensus 84 ~a~~ 87 (338)
+++.
T Consensus 238 ~~~~ 241 (377)
T 2vhw_A 238 AVLV 241 (377)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 8863
No 450
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=96.97 E-value=0.0011 Score=56.50 Aligned_cols=40 Identities=28% Similarity=0.375 Sum_probs=34.7
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHH
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKV 45 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 45 (338)
+++|.|+| +|.+|+.+++.|++.|++|++.+|+++..+..
T Consensus 4 ~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~ 43 (283)
T 4e12_A 4 ITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAA 43 (283)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 57999997 69999999999999999999999987655443
No 451
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.97 E-value=0.00092 Score=57.16 Aligned_cols=65 Identities=20% Similarity=0.348 Sum_probs=50.2
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEec
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHLA 85 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a 85 (338)
|+|.|+| .|.+|..+++.|.+.|++|++.+|+++..+.+... ++ .-..++.++++++|+||-+.
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~-------~~~~~~~~~~~~aDvvi~~v 65 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL--------GA-------ERAATPCEVVESCPVTFAML 65 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT--------TC-------EECSSHHHHHHHCSEEEECC
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC--------CC-------eecCCHHHHHhcCCEEEEEc
Confidence 6899998 79999999999999999999999988776655431 22 12345667777889998765
Q ss_pred c
Q 040253 86 T 86 (338)
Q Consensus 86 ~ 86 (338)
.
T Consensus 66 p 66 (287)
T 3pef_A 66 A 66 (287)
T ss_dssp S
T ss_pred C
Confidence 4
No 452
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.96 E-value=0.00071 Score=58.49 Aligned_cols=66 Identities=17% Similarity=0.185 Sum_probs=50.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
+|+|.|+| .|.+|..+++.|.+.|++|++.+|+++..+.+... ++ ....++.++++++|+||-+
T Consensus 9 ~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~-------~~~~~~~e~~~~aDvVi~~ 72 (306)
T 3l6d_A 9 EFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA--------GA-------HLCESVKAALSASPATIFV 72 (306)
T ss_dssp SCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH--------TC-------EECSSHHHHHHHSSEEEEC
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC--------CC-------eecCCHHHHHhcCCEEEEE
Confidence 57899997 89999999999999999999999987665554331 11 1234566777789999977
Q ss_pred cc
Q 040253 85 AT 86 (338)
Q Consensus 85 a~ 86 (338)
..
T Consensus 73 vp 74 (306)
T 3l6d_A 73 LL 74 (306)
T ss_dssp CS
T ss_pred eC
Confidence 64
No 453
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=96.96 E-value=0.00093 Score=57.44 Aligned_cols=66 Identities=18% Similarity=0.307 Sum_probs=48.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
+|+|.|+| +|.+|..+++.|.+.|++|.+.+|+++..+.+.. .++. ...++.++++++|+||.+
T Consensus 5 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~--------~g~~-------~~~~~~~~~~~~D~vi~~ 68 (299)
T 1vpd_A 5 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA--------AGAE-------TASTAKAIAEQCDVIITM 68 (299)
T ss_dssp -CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH--------TTCE-------ECSSHHHHHHHCSEEEEC
T ss_pred cceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH--------CCCe-------ecCCHHHHHhCCCEEEEE
Confidence 46999998 7999999999999999999999887665544432 1222 123455667789999977
Q ss_pred cc
Q 040253 85 AT 86 (338)
Q Consensus 85 a~ 86 (338)
..
T Consensus 69 v~ 70 (299)
T 1vpd_A 69 LP 70 (299)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 454
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=96.95 E-value=0.00073 Score=58.57 Aligned_cols=68 Identities=19% Similarity=0.178 Sum_probs=47.4
Q ss_pred CCCcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCC--CcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCcc
Q 040253 3 SIAETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDP--DNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCT 79 (338)
Q Consensus 3 ~~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 79 (338)
+.+|+|.|+| .|.+|..+++.|.+.|+ +|++.+|++ +..+.... .++. -..+..++++++|
T Consensus 22 ~~~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~--------~g~~-------~~~~~~e~~~~aD 85 (312)
T 3qsg_A 22 SNAMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEE--------LGVS-------CKASVAEVAGECD 85 (312)
T ss_dssp ---CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHH--------TTCE-------ECSCHHHHHHHCS
T ss_pred CCCCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHH--------CCCE-------EeCCHHHHHhcCC
Confidence 3468999998 79999999999999999 999999974 33332221 1222 1234566777899
Q ss_pred EEEEecc
Q 040253 80 GVFHLAT 86 (338)
Q Consensus 80 ~vi~~a~ 86 (338)
+||-+..
T Consensus 86 vVi~~vp 92 (312)
T 3qsg_A 86 VIFSLVT 92 (312)
T ss_dssp EEEECSC
T ss_pred EEEEecC
Confidence 9997764
No 455
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=96.93 E-value=0.0057 Score=50.71 Aligned_cols=72 Identities=15% Similarity=0.162 Sum_probs=49.7
Q ss_pred cEEEEeCCchhhHHHHHHHHHHC-CCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-----Ccc
Q 040253 6 ETVCVTGASGFIGSWLIMRLLER-GYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-----GCT 79 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d 79 (338)
|||.|+|++|.+|+.+++.+.+. ++++.++.....+.+.... .++. +..|++.++...+.+. +.+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~--------~~~D-vvIDfT~p~a~~~~~~~a~~~g~~ 71 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD--------GNTE-VVIDFTHPDVVMGNLEFLIDNGIH 71 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH--------TTCC-EEEECSCTTTHHHHHHHHHHTTCE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc--------cCCc-EEEEccChHHHHHHHHHHHHcCCC
Confidence 48999999999999999999876 7888877654433332211 1222 5668888887765442 678
Q ss_pred EEEEecc
Q 040253 80 GVFHLAT 86 (338)
Q Consensus 80 ~vi~~a~ 86 (338)
+|+-+.|
T Consensus 72 ~VigTTG 78 (245)
T 1p9l_A 72 AVVGTTG 78 (245)
T ss_dssp EEECCCC
T ss_pred EEEcCCC
Confidence 8875544
No 456
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=96.92 E-value=0.0015 Score=56.58 Aligned_cols=66 Identities=20% Similarity=0.265 Sum_probs=48.9
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
+|+|.|+| .|.+|+.+++.|.+.|++|.+.+|+++..+.+.. .++.. ..+..++++++|+||-+
T Consensus 30 ~~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~--------~g~~~-------~~~~~~~~~~~DvVi~a 93 (316)
T 2uyy_A 30 DKKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQ--------EGARL-------GRTPAEVVSTCDITFAC 93 (316)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHH--------TTCEE-------CSCHHHHHHHCSEEEEC
T ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH--------cCCEE-------cCCHHHHHhcCCEEEEe
Confidence 47899998 7999999999999999999999998776555432 12221 12345566778999877
Q ss_pred cc
Q 040253 85 AT 86 (338)
Q Consensus 85 a~ 86 (338)
..
T Consensus 94 v~ 95 (316)
T 2uyy_A 94 VS 95 (316)
T ss_dssp CS
T ss_pred CC
Confidence 64
No 457
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.92 E-value=0.00094 Score=58.92 Aligned_cols=66 Identities=14% Similarity=0.173 Sum_probs=48.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCc---cEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGC---TGV 81 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---d~v 81 (338)
+|+|.|+| .|.+|..+++.|++.|++|.+.+|+++..+.+.. . .+....++.++++++ |+|
T Consensus 22 ~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~--------~-------g~~~~~s~~e~~~~a~~~DvV 85 (358)
T 4e21_A 22 SMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALER--------E-------GIAGARSIEEFCAKLVKPRVV 85 (358)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT--------T-------TCBCCSSHHHHHHHSCSSCEE
T ss_pred CCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH--------C-------CCEEeCCHHHHHhcCCCCCEE
Confidence 47999998 8999999999999999999999998766554432 1 122234455555544 999
Q ss_pred EEecc
Q 040253 82 FHLAT 86 (338)
Q Consensus 82 i~~a~ 86 (338)
|-+..
T Consensus 86 i~~vp 90 (358)
T 4e21_A 86 WLMVP 90 (358)
T ss_dssp EECSC
T ss_pred EEeCC
Confidence 87764
No 458
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=96.92 E-value=0.0015 Score=57.32 Aligned_cols=70 Identities=27% Similarity=0.265 Sum_probs=49.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh----h--CC
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP----I--RG 77 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~----~--~~ 77 (338)
...+|||+||+|-+|..+++.+...|.+|+++ +++++.+..+.+ ++.. .| .+ +++.+. . .+
T Consensus 150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~~l--------Ga~~--i~-~~-~~~~~~~~~~~~~~g 216 (343)
T 3gaz_A 150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVRDL--------GATP--ID-AS-REPEDYAAEHTAGQG 216 (343)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHHHH--------TSEE--EE-TT-SCHHHHHHHHHTTSC
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHHHc--------CCCE--ec-cC-CCHHHHHHHHhcCCC
Confidence 35799999999999999999999999999988 665554444433 2233 33 22 223332 2 26
Q ss_pred ccEEEEecc
Q 040253 78 CTGVFHLAT 86 (338)
Q Consensus 78 ~d~vi~~a~ 86 (338)
+|+||++++
T Consensus 217 ~D~vid~~g 225 (343)
T 3gaz_A 217 FDLVYDTLG 225 (343)
T ss_dssp EEEEEESSC
T ss_pred ceEEEECCC
Confidence 999999987
No 459
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.89 E-value=0.0022 Score=58.26 Aligned_cols=80 Identities=15% Similarity=0.200 Sum_probs=53.9
Q ss_pred cEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEE------EecccCCCCCchhhhCCcc
Q 040253 6 ETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTL------WKADLAEEGNFDEPIRGCT 79 (338)
Q Consensus 6 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~------~~~Dl~d~~~~~~~~~~~d 79 (338)
-+|.|+| .|++|..++..|+++|++|++.+|+++..+.+..- ..+...++++- ..+.+.-..++.++++++|
T Consensus 9 ~~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g-~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aD 86 (446)
T 4a7p_A 9 VRIAMIG-TGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQN-VMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDAD 86 (446)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTT-CCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCS
T ss_pred eEEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcC-CCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCC
Confidence 5788997 99999999999999999999999999887665431 11111111110 0011222345567788999
Q ss_pred EEEEeccc
Q 040253 80 GVFHLATP 87 (338)
Q Consensus 80 ~vi~~a~~ 87 (338)
+||-+.+.
T Consensus 87 vvii~Vpt 94 (446)
T 4a7p_A 87 AVFIAVGT 94 (446)
T ss_dssp EEEECCCC
T ss_pred EEEEEcCC
Confidence 99988653
No 460
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=96.88 E-value=0.0012 Score=60.60 Aligned_cols=81 Identities=15% Similarity=0.090 Sum_probs=51.6
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEE-EE-----ecccCCCCCchhhhCCc
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLT-LW-----KADLAEEGNFDEPIRGC 78 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~-----~~Dl~d~~~~~~~~~~~ 78 (338)
.|+|.|+| +|++|..++..|.+.|++|++++|+++..+.+..-. .+...++++ .+ .+.+.-..++.++++++
T Consensus 8 ~~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~-~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~a 85 (478)
T 2y0c_A 8 SMNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGG-VPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHG 85 (478)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTC-CSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHC
T ss_pred CceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCC-CCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcC
Confidence 47999997 999999999999999999999999876655544311 111111110 00 00111123344566788
Q ss_pred cEEEEeccc
Q 040253 79 TGVFHLATP 87 (338)
Q Consensus 79 d~vi~~a~~ 87 (338)
|+||-+...
T Consensus 86 DvviiaVpt 94 (478)
T 2y0c_A 86 DVQFIAVGT 94 (478)
T ss_dssp SEEEECCCC
T ss_pred CEEEEEeCC
Confidence 999988753
No 461
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=96.87 E-value=0.0061 Score=44.59 Aligned_cols=84 Identities=14% Similarity=0.060 Sum_probs=54.6
Q ss_pred CCCcEEEEeCCc---hhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCcc
Q 040253 3 SIAETVCVTGAS---GFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCT 79 (338)
Q Consensus 3 ~~~~~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d 79 (338)
..+++|.|.|+| +..|..+++.|++.|++|+-+...... + ....-..++.++-. +|
T Consensus 2 ~~p~siAVVGaS~~~~~~g~~v~~~L~~~g~~V~pVnP~~~~-------------------i-~G~~~y~sl~dlp~-vD 60 (122)
T 3ff4_A 2 NAMKKTLILGATPETNRYAYLAAERLKSHGHEFIPVGRKKGE-------------------V-LGKTIINERPVIEG-VD 60 (122)
T ss_dssp CCCCCEEEETCCSCTTSHHHHHHHHHHHHTCCEEEESSSCSE-------------------E-TTEECBCSCCCCTT-CC
T ss_pred CCCCEEEEEccCCCCCCHHHHHHHHHHHCCCeEEEECCCCCc-------------------C-CCeeccCChHHCCC-CC
Confidence 346899999998 789999999999999988877543221 1 12222333444445 78
Q ss_pred EEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEE
Q 040253 80 GVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVF 125 (338)
Q Consensus 80 ~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~ 125 (338)
.++-+... ..+..+++.|.+.+ ++.+++
T Consensus 61 lavi~~p~-----------------~~v~~~v~e~~~~g-~k~v~~ 88 (122)
T 3ff4_A 61 TVTLYINP-----------------QNQLSEYNYILSLK-PKRVIF 88 (122)
T ss_dssp EEEECSCH-----------------HHHGGGHHHHHHHC-CSEEEE
T ss_pred EEEEEeCH-----------------HHHHHHHHHHHhcC-CCEEEE
Confidence 77755431 11345677787788 776553
No 462
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=96.86 E-value=0.0031 Score=52.70 Aligned_cols=104 Identities=17% Similarity=0.210 Sum_probs=61.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCC-------------------CcHHHHHH-HhcCCCCCCcEEEEec
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDP-------------------DNKKKVKH-LLELPKASTHLTLWKA 63 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~-------------------~~~~~~~~-~~~~~~~~~~~~~~~~ 63 (338)
.++|+|.|+ |-+|+++++.|...|. ++.+++++. .+.+.... +.... ..-+++.+..
T Consensus 28 ~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~~~v~~~~~ 105 (251)
T 1zud_1 28 DSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN-PDIQLTALQQ 105 (251)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC-TTSEEEEECS
T ss_pred cCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC-CCCEEEEEec
Confidence 468999995 5599999999999995 777776543 22222211 11111 0123455554
Q ss_pred ccCCCCCchhhhCCccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCc
Q 040253 64 DLAEEGNFDEPIRGCTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSA 129 (338)
Q Consensus 64 Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~ 129 (338)
+++ .+.+.++++++|+||.+.. +. ..-..+.+++...+ ++ +|+.+..
T Consensus 106 ~~~-~~~~~~~~~~~DvVi~~~d--------~~--------~~r~~l~~~~~~~~-~p-~i~~~~~ 152 (251)
T 1zud_1 106 RLT-GEALKDAVARADVVLDCTD--------NM--------ATRQEINAACVALN-TP-LITASAV 152 (251)
T ss_dssp CCC-HHHHHHHHHHCSEEEECCS--------SH--------HHHHHHHHHHHHTT-CC-EEEEEEE
T ss_pred cCC-HHHHHHHHhcCCEEEECCC--------CH--------HHHHHHHHHHHHhC-CC-EEEEecc
Confidence 443 2345567778999997743 11 11234566777776 44 6666543
No 463
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=96.86 E-value=0.0014 Score=59.26 Aligned_cols=69 Identities=19% Similarity=0.247 Sum_probs=53.5
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
++++|+|+| +|.+|+.+++.+.+.|++|++++.++...... . . -+.+..|..|.+.+.++.+++|+|+.
T Consensus 34 ~~~~IlIlG-~G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~--~-------a-d~~~~~~~~d~~~l~~~a~~~D~V~~ 102 (419)
T 4e4t_A 34 PGAWLGMVG-GGQLGRMFCFAAQSMGYRVAVLDPDPASPAGA--V-------A-DRHLRAAYDDEAALAELAGLCEAVST 102 (419)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCTTCHHHH--H-------S-SEEECCCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEECCCCcCchhh--h-------C-CEEEECCcCCHHHHHHHHhcCCEEEE
Confidence 467999998 68999999999999999999987765443211 1 1 14566888898888888889999883
No 464
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=96.84 E-value=0.00068 Score=56.60 Aligned_cols=66 Identities=14% Similarity=0.173 Sum_probs=49.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC----eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY----AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
+|+|.|+| +|.+|+.+++.|.+.|+ +|.+.+|+++..+.+.... ++. -..+..++++++|+
T Consensus 2 ~~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~-------g~~-------~~~~~~e~~~~aDv 66 (247)
T 3gt0_A 2 DKQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY-------GLT-------TTTDNNEVAKNADI 66 (247)
T ss_dssp CCCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH-------CCE-------ECSCHHHHHHHCSE
T ss_pred CCeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh-------CCE-------EeCChHHHHHhCCE
Confidence 57899998 99999999999999998 9999999877655543211 122 12344566777899
Q ss_pred EEEec
Q 040253 81 VFHLA 85 (338)
Q Consensus 81 vi~~a 85 (338)
||-+.
T Consensus 67 Vilav 71 (247)
T 3gt0_A 67 LILSI 71 (247)
T ss_dssp EEECS
T ss_pred EEEEe
Confidence 98776
No 465
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=96.83 E-value=0.0019 Score=59.00 Aligned_cols=44 Identities=27% Similarity=0.308 Sum_probs=37.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHH
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKH 47 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~ 47 (338)
.+++|||+||+|-||..+++.+...|.+|+++++++++.+..+.
T Consensus 220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~~~ 263 (447)
T 4a0s_A 220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA 263 (447)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 36899999999999999999999999999999987665555443
No 466
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=96.83 E-value=0.0019 Score=56.03 Aligned_cols=44 Identities=27% Similarity=0.393 Sum_probs=34.6
Q ss_pred CCCC-CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHH
Q 040253 1 MGSI-AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKV 45 (338)
Q Consensus 1 m~~~-~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 45 (338)
|+.+ +++|.|+| +|.+|..++..|++.|++|++.+|+++..+..
T Consensus 1 m~~~~~~kI~vIG-aG~MG~~iA~~la~~G~~V~l~d~~~~~~~~~ 45 (319)
T 2dpo_A 1 MASPAAGDVLIVG-SGLVGRSWAMLFASGGFRVKLYDIEPRQITGA 45 (319)
T ss_dssp ------CEEEEEC-CSHHHHHHHHHHHHTTCCEEEECSCHHHHHHH
T ss_pred CCCCCCceEEEEe-eCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 5543 57899998 79999999999999999999999987765544
No 467
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=96.82 E-value=0.0011 Score=56.06 Aligned_cols=67 Identities=12% Similarity=0.192 Sum_probs=47.8
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCe-EEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYA-VRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
+|+|.|+| +|.+|+.+++.|.+.|++ |.+.+|+++....+.... ++.. ..++.++++++|+||-
T Consensus 10 ~m~i~iiG-~G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~-------g~~~-------~~~~~~~~~~~Dvvi~ 74 (266)
T 3d1l_A 10 DTPIVLIG-AGNLATNLAKALYRKGFRIVQVYSRTEESARELAQKV-------EAEY-------TTDLAEVNPYAKLYIV 74 (266)
T ss_dssp GCCEEEEC-CSHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHT-------TCEE-------ESCGGGSCSCCSEEEE
T ss_pred CCeEEEEc-CCHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHc-------CCce-------eCCHHHHhcCCCEEEE
Confidence 57899998 599999999999999998 888888766554443211 2222 1234456678999997
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
+..
T Consensus 75 av~ 77 (266)
T 3d1l_A 75 SLK 77 (266)
T ss_dssp CCC
T ss_pred ecC
Confidence 754
No 468
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.82 E-value=0.0035 Score=56.73 Aligned_cols=122 Identities=11% Similarity=0.067 Sum_probs=74.4
Q ss_pred CCCCCcEEEEeCCchh-hHHHHHHHHHH----CCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh
Q 040253 1 MGSIAETVCVTGASGF-IGSWLIMRLLE----RGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI 75 (338)
Q Consensus 1 m~~~~~~ilVtGatG~-iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 75 (338)
|+++.+||.|+||.+. -|..++..|+. .| +|...+++++..+........-. . ....+.-..++.+++
T Consensus 1 m~m~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~le~~~~~~~~l~---~---~~~~I~~TtD~~eAl 73 (450)
T 3fef_A 1 MSLDQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAAQKNEVIGNHSG---N---GRWRYEAVSTLKKAL 73 (450)
T ss_dssp --CCCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHHHHHHHHHTTST---T---SCEEEEEESSHHHHH
T ss_pred CCCCCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHHHHHHHHHHHHh---c---cCCeEEEECCHHHHh
Confidence 6666789999996543 48899998886 46 89999998766554444333211 1 112222345677889
Q ss_pred CCccEEEEecccCCCC--------CCCcc---c--hhhh--------hhhHHHHHHHHHHHhCCCccEEEEecCc
Q 040253 76 RGCTGVFHLATPMDFE--------SKDPE---N--EVIR--------PTINGMVSIMRACKNAKTVRRLVFTSSA 129 (338)
Q Consensus 76 ~~~d~vi~~a~~~~~~--------~~~~~---~--~~~~--------~n~~~~~~l~~~~~~~~~~~~~v~~Ss~ 129 (338)
+++|.||..+...... ..++. . ++.- .|+.....+++.+++..+-..+|.+|..
T Consensus 74 ~dADfVI~airvG~~~~~~~De~ip~k~G~~~~vget~g~GGi~~alr~~~i~~~i~~~i~~~~p~a~~i~~tNP 148 (450)
T 3fef_A 74 SAADIVIISILPGSLDDMEVDVHLPERCGIYQSVGDTVGPGGIIRGLRAVPIFAEIARAIRDYAPESWVINYTNP 148 (450)
T ss_dssp TTCSEEEECCCSSCHHHHHHHHHGGGGGTCCCSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSS
T ss_pred cCCCEEEeccccCCcccchhhhhhhhccCccccchhhcCCchhhcccccHHHHHHHHHHHHHHCCCeEEEEecCc
Confidence 9999999998432100 00000 0 1122 4677778888888876646778877764
No 469
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=96.82 E-value=0.0015 Score=58.03 Aligned_cols=74 Identities=11% Similarity=0.132 Sum_probs=53.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHH-HHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVK-HLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
...+|||+|+ |-+|..+++.+...|.+|+++++++++.+... .+ +... ..|..+.+.+.++..++|+||
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~l--------Ga~~-v~~~~~~~~~~~~~~~~D~vi 256 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNF--------GADS-FLVSRDQEQMQAAAGTLDGII 256 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTS--------CCSE-EEETTCHHHHHHTTTCEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc--------CCce-EEeccCHHHHHHhhCCCCEEE
Confidence 4579999996 99999999999999999999999876655433 21 1111 124445444555556899999
Q ss_pred Eeccc
Q 040253 83 HLATP 87 (338)
Q Consensus 83 ~~a~~ 87 (338)
++++.
T Consensus 257 d~~g~ 261 (366)
T 1yqd_A 257 DTVSA 261 (366)
T ss_dssp ECCSS
T ss_pred ECCCc
Confidence 99984
No 470
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.81 E-value=0.0037 Score=55.33 Aligned_cols=95 Identities=15% Similarity=0.141 Sum_probs=63.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh----hC--C
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP----IR--G 77 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~----~~--~ 77 (338)
...+|||+| +|-+|...++.+...|.+|+++++++++.+..+.+.. ..+ .| .+.+++.+. .. +
T Consensus 189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa--------~~v-i~-~~~~~~~~~v~~~~~g~g 257 (363)
T 3uog_A 189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAFALGA--------DHG-IN-RLEEDWVERVYALTGDRG 257 (363)
T ss_dssp TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC--------SEE-EE-TTTSCHHHHHHHHHTTCC
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHcCC--------CEE-Ec-CCcccHHHHHHHHhCCCC
Confidence 357999999 8999999999999999999999988766665554321 111 23 333333332 22 6
Q ss_pred ccEEEEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEecCc
Q 040253 78 CTGVFHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSA 129 (338)
Q Consensus 78 ~d~vi~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~ 129 (338)
+|+||.+++. .. ....++.++..| +++.++..
T Consensus 258 ~D~vid~~g~------~~-----------~~~~~~~l~~~G---~iv~~G~~ 289 (363)
T 3uog_A 258 ADHILEIAGG------AG-----------LGQSLKAVAPDG---RISVIGVL 289 (363)
T ss_dssp EEEEEEETTS------SC-----------HHHHHHHEEEEE---EEEEECCC
T ss_pred ceEEEECCCh------HH-----------HHHHHHHhhcCC---EEEEEecC
Confidence 9999999982 11 233455555544 78877653
No 471
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=96.81 E-value=0.015 Score=43.99 Aligned_cols=85 Identities=15% Similarity=0.139 Sum_probs=55.0
Q ss_pred CcEEEEeCCc---hhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEE
Q 040253 5 AETVCVTGAS---GFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGV 81 (338)
Q Consensus 5 ~~~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 81 (338)
.++|.|.|++ |.+|..+++.|.+.|++|+.+ ++... .+ ..+.-..++.++...+|.+
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~V--np~~~--------------~i----~G~~~y~sl~~l~~~vDlv 81 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPV--NPKYE--------------EV----LGRKCYPSVLDIPDKIEVV 81 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEE--CTTCS--------------EE----TTEECBSSGGGCSSCCSEE
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEE--CCCCC--------------eE----CCeeccCCHHHcCCCCCEE
Confidence 5789999998 899999999999999986544 44321 01 1222234445555578988
Q ss_pred EEecccCCCCCCCccchhhhhhhHHHHHHHHHHHhCCCccEEEEec
Q 040253 82 FHLATPMDFESKDPENEVIRPTINGMVSIMRACKNAKTVRRLVFTS 127 (338)
Q Consensus 82 i~~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~S 127 (338)
+-+... .....+++.|.+.+ ++.+++.+
T Consensus 82 vi~vp~-----------------~~~~~vv~~~~~~g-i~~i~~~~ 109 (144)
T 2d59_A 82 DLFVKP-----------------KLTMEYVEQAIKKG-AKVVWFQY 109 (144)
T ss_dssp EECSCH-----------------HHHHHHHHHHHHHT-CSEEEECT
T ss_pred EEEeCH-----------------HHHHHHHHHHHHcC-CCEEEECC
Confidence 865431 11455677777777 77666443
No 472
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=96.81 E-value=0.0014 Score=56.41 Aligned_cols=69 Identities=19% Similarity=0.117 Sum_probs=48.1
Q ss_pred CCCCCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccE
Q 040253 1 MGSIAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTG 80 (338)
Q Consensus 1 m~~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 80 (338)
|+ .+|+|.|+| .|.+|+.+++.|.+.|++|.+.+|+++....+.. .++.. ..++.++++++|+
T Consensus 1 M~-~~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~--------~g~~~-------~~~~~~~~~~~D~ 63 (301)
T 3cky_A 1 ME-KSIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVA--------QGAQA-------CENNQKVAAASDI 63 (301)
T ss_dssp ----CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHT--------TTCEE-------CSSHHHHHHHCSE
T ss_pred CC-CCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH--------CCCee-------cCCHHHHHhCCCE
Confidence 44 357899998 7999999999999999999999887655443322 12221 2345566677899
Q ss_pred EEEecc
Q 040253 81 VFHLAT 86 (338)
Q Consensus 81 vi~~a~ 86 (338)
||-+..
T Consensus 64 vi~~vp 69 (301)
T 3cky_A 64 IFTSLP 69 (301)
T ss_dssp EEECCS
T ss_pred EEEECC
Confidence 997763
No 473
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=96.80 E-value=0.0012 Score=58.23 Aligned_cols=73 Identities=14% Similarity=0.171 Sum_probs=54.1
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEeccc------------------C
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADL------------------A 66 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl------------------~ 66 (338)
..+|+|+|+ |-+|..+++.+...|.+|++++|++...+....+ +.+++..+. .
T Consensus 184 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~l--------Ga~~~~l~~~~~~~~gya~~~~~~~~~~ 254 (381)
T 3p2y_A 184 PASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRSV--------GAQWLDLGIDAAGEGGYARELSEAERAQ 254 (381)
T ss_dssp CCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHT--------TCEECCCC-------------CHHHHHH
T ss_pred CCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc--------CCeEEeccccccccccchhhhhHHHHhh
Confidence 579999985 9999999999999999999999998876666542 234433221 0
Q ss_pred CCCCchhhhCCccEEEEecc
Q 040253 67 EEGNFDEPIRGCTGVFHLAT 86 (338)
Q Consensus 67 d~~~~~~~~~~~d~vi~~a~ 86 (338)
+.+.+.++++++|+||.++.
T Consensus 255 ~~~~l~e~l~~aDIVI~tv~ 274 (381)
T 3p2y_A 255 QQQALEDAITKFDIVITTAL 274 (381)
T ss_dssp HHHHHHHHHTTCSEEEECCC
T ss_pred hHHHHHHHHhcCCEEEECCC
Confidence 12345677789999998764
No 474
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.80 E-value=0.00091 Score=61.08 Aligned_cols=120 Identities=8% Similarity=0.115 Sum_probs=73.0
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHC-----CCeEEEEEcCCCcHHHHHHHhc-C-CCCCCcEEEEecccCCCCCchhhhCC
Q 040253 5 AETVCVTGASGFIGSWLIMRLLER-----GYAVRATVRDPDNKKKVKHLLE-L-PKASTHLTLWKADLAEEGNFDEPIRG 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~~~-~-~~~~~~~~~~~~Dl~d~~~~~~~~~~ 77 (338)
.+||.|+||.+..|..++..|+.+ +.+|...+++++..+....+.. . +......++.. ..++.+++++
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~-----t~D~~eal~~ 102 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAA-----TTDPEEAFTD 102 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEE-----ESCHHHHHSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEE-----ECCHHHHHcC
Confidence 469999998776688888888887 6789999998765443322211 0 00001112211 2345678899
Q ss_pred ccEEEEecccCCCCCCCc-------------------cchhhhhhhHHHHHHHHHHHhCCCccEEEEecCc
Q 040253 78 CTGVFHLATPMDFESKDP-------------------ENEVIRPTINGMVSIMRACKNAKTVRRLVFTSSA 129 (338)
Q Consensus 78 ~d~vi~~a~~~~~~~~~~-------------------~~~~~~~n~~~~~~l~~~~~~~~~~~~~v~~Ss~ 129 (338)
+|+||..++......... .-....-|+.....+++.+.+..+-..++.+|-.
T Consensus 103 AD~VViaag~~~~~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNP 173 (472)
T 1u8x_X 103 VDFVMAHIRVGKYAMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSNP 173 (472)
T ss_dssp CSEEEECCCTTHHHHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCSC
T ss_pred CCEEEEcCCCccccccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHHCCCeEEEEeCCc
Confidence 999999997422100000 0112456777888888888888745667766653
No 475
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=96.79 E-value=0.0056 Score=53.65 Aligned_cols=68 Identities=19% Similarity=0.183 Sum_probs=51.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
.+|+|.|+| .|-||+.+++.|...|.+|.+.+|++...+..... ++.. .+++.++++++|+|+.
T Consensus 163 ~gktvGIIG-~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~~~--------g~~~-------~~~l~ell~~aDvV~l 226 (351)
T 3jtm_A 163 EGKTIGTVG-AGRIGKLLLQRLKPFGCNLLYHDRLQMAPELEKET--------GAKF-------VEDLNEMLPKCDVIVI 226 (351)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHGGGCCEEEEECSSCCCHHHHHHH--------CCEE-------CSCHHHHGGGCSEEEE
T ss_pred cCCEEeEEE-eCHHHHHHHHHHHHCCCEEEEeCCCccCHHHHHhC--------CCeE-------cCCHHHHHhcCCEEEE
Confidence 368999998 89999999999999999999999987554433221 2221 2457788889999998
Q ss_pred eccc
Q 040253 84 LATP 87 (338)
Q Consensus 84 ~a~~ 87 (338)
+...
T Consensus 227 ~~Pl 230 (351)
T 3jtm_A 227 NMPL 230 (351)
T ss_dssp CSCC
T ss_pred CCCC
Confidence 7754
No 476
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=96.78 E-value=0.0023 Score=56.59 Aligned_cols=74 Identities=18% Similarity=0.167 Sum_probs=53.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh-CCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI-RGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~vi 82 (338)
...+|||+|+ |-+|..+++.+...|.+|+++++++++.+..+.+.. . .+ .|..+..++.+.+ .++|+||
T Consensus 179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa-----~--~v--~~~~~~~~~~~~~~~~~D~vi 248 (360)
T 1piw_A 179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGA-----D--HY--IATLEEGDWGEKYFDTFDLIV 248 (360)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC-----S--EE--EEGGGTSCHHHHSCSCEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCC-----C--EE--EcCcCchHHHHHhhcCCCEEE
Confidence 3579999999 999999999988889999999998887766655421 1 11 2333331233333 4899999
Q ss_pred Eeccc
Q 040253 83 HLATP 87 (338)
Q Consensus 83 ~~a~~ 87 (338)
.+++.
T Consensus 249 d~~g~ 253 (360)
T 1piw_A 249 VCASS 253 (360)
T ss_dssp ECCSC
T ss_pred ECCCC
Confidence 99974
No 477
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=96.78 E-value=0.0015 Score=58.27 Aligned_cols=69 Identities=16% Similarity=0.241 Sum_probs=52.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
++++|+|+| +|.+|+.+++.+.+.|++|++++.++..... .. --..+..|..|.+.+.++.+++|+|..
T Consensus 11 ~~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p~~--~~--------ad~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 11 FGATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCPCR--YV--------AHEFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTG--GG--------SSEEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCChhh--hh--------CCEEEECCCCCHHHHHHHHHhCCccee
Confidence 467999998 6889999999999999999999876543211 00 114667889898888888888998754
No 478
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=96.78 E-value=0.0018 Score=55.53 Aligned_cols=66 Identities=14% Similarity=0.094 Sum_probs=47.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
+||+|.|+| +|.+|+.+++.|.+.|++|.+.+ +++....+.. .+ +.-..++.++++++|+||-
T Consensus 2 ~~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~--------~g-------~~~~~~~~~~~~~~D~vi~ 64 (295)
T 1yb4_A 2 NAMKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IGPVADELLS--------LG-------AVNVETARQVTEFADIIFI 64 (295)
T ss_dssp --CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHT--------TT-------CBCCSSHHHHHHTCSEEEE
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHH--------cC-------CcccCCHHHHHhcCCEEEE
Confidence 457999998 89999999999999999999887 6665544332 11 1223445666778999987
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
+..
T Consensus 65 ~vp 67 (295)
T 1yb4_A 65 MVP 67 (295)
T ss_dssp CCS
T ss_pred ECC
Confidence 763
No 479
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.78 E-value=0.0026 Score=54.73 Aligned_cols=70 Identities=14% Similarity=0.203 Sum_probs=51.5
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
.+++|+|+| .|-+|+.+++.|...|.+|++.+|+++....... .+++.+ +..++.++++++|+|+.
T Consensus 156 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~--------~g~~~~-----~~~~l~~~l~~aDvVi~ 221 (300)
T 2rir_A 156 HGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLARITE--------MGLVPF-----HTDELKEHVKDIDICIN 221 (300)
T ss_dssp TTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--------TTCEEE-----EGGGHHHHSTTCSEEEE
T ss_pred CCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH--------CCCeEE-----chhhHHHHhhCCCEEEE
Confidence 468999999 5999999999999999999999997654333221 122322 12346677889999998
Q ss_pred eccc
Q 040253 84 LATP 87 (338)
Q Consensus 84 ~a~~ 87 (338)
+...
T Consensus 222 ~~p~ 225 (300)
T 2rir_A 222 TIPS 225 (300)
T ss_dssp CCSS
T ss_pred CCCh
Confidence 8763
No 480
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=96.75 E-value=0.0085 Score=51.02 Aligned_cols=63 Identities=16% Similarity=0.056 Sum_probs=49.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
.+++|.|+| .|.||+.+++.|...|++|.+.+|++.... . ....+++.++++++|+|+.
T Consensus 121 ~g~tvGIIG-lG~IG~~vA~~l~~~G~~V~~~dr~~~~~~-------------~-------~~~~~~l~ell~~aDiV~l 179 (290)
T 3gvx_A 121 YGKALGILG-YGGIGRRVAHLAKAFGMRVIAYTRSSVDQN-------------V-------DVISESPADLFRQSDFVLI 179 (290)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSCCCTT-------------C-------SEECSSHHHHHHHCSEEEE
T ss_pred ecchheeec-cCchhHHHHHHHHhhCcEEEEEeccccccc-------------c-------ccccCChHHHhhccCeEEE
Confidence 368999998 899999999999999999999999765421 1 1123467788889999998
Q ss_pred eccc
Q 040253 84 LATP 87 (338)
Q Consensus 84 ~a~~ 87 (338)
+...
T Consensus 180 ~~P~ 183 (290)
T 3gvx_A 180 AIPL 183 (290)
T ss_dssp CCCC
T ss_pred Eeec
Confidence 8753
No 481
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=96.75 E-value=0.0012 Score=60.59 Aligned_cols=80 Identities=18% Similarity=0.238 Sum_probs=49.3
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHC--CCeEEEEEcCCCcHHHHHHHhcCCCCCCcEE-EEe----cccCCCCCchhhhCC
Q 040253 5 AETVCVTGASGFIGSWLIMRLLER--GYAVRATVRDPDNKKKVKHLLELPKASTHLT-LWK----ADLAEEGNFDEPIRG 77 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~----~Dl~d~~~~~~~~~~ 77 (338)
+|+|.|+| +|++|..++..|++. |++|++++|+++..+.+..- ..+...++.. .+. ..+.-..++.+++++
T Consensus 5 ~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l~~g-~~~i~e~~l~~~~~~~~~~~~~~t~~~~e~~~~ 82 (467)
T 2q3e_A 5 IKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAWNSP-TLPIYEPGLKEVVESCRGKNLFFSTNIDDAIKE 82 (467)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSS-SCSSCCTTHHHHHHHHBTTTEEEESCHHHHHHH
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHhCC-CCCcCCCCHHHHHHHhhcCCEEEECCHHHHHhc
Confidence 47999998 899999999999998 89999999987655443210 0000000000 000 111112334556678
Q ss_pred ccEEEEecc
Q 040253 78 CTGVFHLAT 86 (338)
Q Consensus 78 ~d~vi~~a~ 86 (338)
+|+||-+..
T Consensus 83 aDvViiaVp 91 (467)
T 2q3e_A 83 ADLVFISVN 91 (467)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEEcC
Confidence 999998875
No 482
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=96.75 E-value=0.0017 Score=56.46 Aligned_cols=73 Identities=19% Similarity=0.146 Sum_probs=51.5
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
...+|+|+||+|-+|...++.+...|.+|+++++.. +.+..+.+. +.. ..|..+.+.+.+.++++|+||.
T Consensus 152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~~~~~~lG--------a~~-~i~~~~~~~~~~~~~g~D~v~d 221 (321)
T 3tqh_A 152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NHAFLKALG--------AEQ-CINYHEEDFLLAISTPVDAVID 221 (321)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HHHHHHHHT--------CSE-EEETTTSCHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hHHHHHHcC--------CCE-EEeCCCcchhhhhccCCCEEEE
Confidence 367999999999999999999999999999887532 233333321 111 2244444436666689999999
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
+.+
T Consensus 222 ~~g 224 (321)
T 3tqh_A 222 LVG 224 (321)
T ss_dssp SSC
T ss_pred CCC
Confidence 987
No 483
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=96.74 E-value=0.0017 Score=59.73 Aligned_cols=41 Identities=12% Similarity=0.182 Sum_probs=34.7
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHC--CCeEEEEEcCCCcHHHH
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLER--GYAVRATVRDPDNKKKV 45 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~ 45 (338)
++|+|.|+| .|++|..++..|.+. |++|++++|+++..+.+
T Consensus 8 ~~mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l 50 (481)
T 2o3j_A 8 KVSKVVCVG-AGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEW 50 (481)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHH
Confidence 357999997 899999999999998 79999999987655444
No 484
>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*
Probab=96.73 E-value=0.0013 Score=61.32 Aligned_cols=70 Identities=20% Similarity=0.195 Sum_probs=45.9
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchh-hhCCccEEEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDE-PIRGCTGVFH 83 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~-~~~~~d~vi~ 83 (338)
.++++|||| |-+|+.++..|++.|.+|++++|+.++...+..... ..+ + ++.| +.+ ....+|++||
T Consensus 364 ~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~-----~~~--~--~~~d---l~~~~~~~~DilVN 430 (523)
T 2o7s_A 364 SKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG-----GKA--L--SLTD---LDNYHPEDGMVLAN 430 (523)
T ss_dssp --CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT-----C-C--E--ETTT---TTTC--CCSEEEEE
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-----Cce--e--eHHH---hhhccccCceEEEE
Confidence 468999998 799999999999999999999998766555433221 111 1 1222 222 1235899999
Q ss_pred eccc
Q 040253 84 LATP 87 (338)
Q Consensus 84 ~a~~ 87 (338)
+++.
T Consensus 431 ~agv 434 (523)
T 2o7s_A 431 TTSM 434 (523)
T ss_dssp CSST
T ss_pred CCCC
Confidence 9985
No 485
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=96.72 E-value=0.0033 Score=55.24 Aligned_cols=69 Identities=16% Similarity=0.178 Sum_probs=51.6
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
.+.+|||+|+ |-+|...++.+...|.+|+++++++++.+..+.+.. . ..+ .+.+.+.+ ++|+||.
T Consensus 176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa-----~--~v~----~~~~~~~~---~~D~vid 240 (348)
T 3two_A 176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALSMGV-----K--HFY----TDPKQCKE---ELDFIIS 240 (348)
T ss_dssp TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHHTTC-----S--EEE----SSGGGCCS---CEEEEEE
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCC-----C--eec----CCHHHHhc---CCCEEEE
Confidence 3679999997 999999999998899999999998888776655321 1 222 33333333 8999999
Q ss_pred eccc
Q 040253 84 LATP 87 (338)
Q Consensus 84 ~a~~ 87 (338)
+++.
T Consensus 241 ~~g~ 244 (348)
T 3two_A 241 TIPT 244 (348)
T ss_dssp CCCS
T ss_pred CCCc
Confidence 9884
No 486
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=96.72 E-value=0.0021 Score=56.34 Aligned_cols=72 Identities=19% Similarity=0.155 Sum_probs=50.8
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchh----hhCCcc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDE----PIRGCT 79 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~----~~~~~d 79 (338)
.+++|||+|| |-+|..+++.+...|.+|++++|++++.+..+.+ ++.. ..|..+.+ +.+ +..++|
T Consensus 164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~l--------Ga~~-~~d~~~~~-~~~~~~~~~~~~d 232 (339)
T 1rjw_A 164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKEL--------GADL-VVNPLKED-AAKFMKEKVGGVH 232 (339)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT--------TCSE-EECTTTSC-HHHHHHHHHSSEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHC--------CCCE-EecCCCcc-HHHHHHHHhCCCC
Confidence 3579999999 6699999999999999999999876665544432 1111 23555432 322 225799
Q ss_pred EEEEecc
Q 040253 80 GVFHLAT 86 (338)
Q Consensus 80 ~vi~~a~ 86 (338)
+||++++
T Consensus 233 ~vid~~g 239 (339)
T 1rjw_A 233 AAVVTAV 239 (339)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999987
No 487
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=96.70 E-value=0.0026 Score=56.58 Aligned_cols=74 Identities=26% Similarity=0.187 Sum_probs=54.5
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEeccc----------------CC-
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADL----------------AE- 67 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl----------------~d- 67 (338)
..+|+|+|+ |-+|..+++.+...|.+|+++++++...+....+ +..++..++ ++
T Consensus 190 ~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~~--------G~~~~~~~~~~~~d~~~~~~ya~e~s~~ 260 (405)
T 4dio_A 190 AAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVASL--------GAKFIAVEDEEFKAAETAGGYAKEMSGE 260 (405)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHHT--------TCEECCCCC-----------------CH
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHc--------CCceeecccccccccccccchhhhcchh
Confidence 579999995 9999999999999999999999998876665543 223333221 11
Q ss_pred -----CCCchhhhCCccEEEEeccc
Q 040253 68 -----EGNFDEPIRGCTGVFHLATP 87 (338)
Q Consensus 68 -----~~~~~~~~~~~d~vi~~a~~ 87 (338)
.+.+.++++++|+||.++..
T Consensus 261 ~~~~~~~~l~e~l~~aDVVI~tvli 285 (405)
T 4dio_A 261 YQVKQAALVAEHIAKQDIVITTALI 285 (405)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred hhhhhHhHHHHHhcCCCEEEECCcC
Confidence 12466677899999998753
No 488
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=96.69 E-value=0.0039 Score=55.43 Aligned_cols=74 Identities=18% Similarity=0.147 Sum_probs=49.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh--CCccEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI--RGCTGV 81 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~--~~~d~v 81 (338)
.+.+|+|+||+|-+|..+++.+...|.+|++++ ++++.+..+.+ ++.. ..|..+.+...++. .++|+|
T Consensus 183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~~l--------Ga~~-v~~~~~~~~~~~~~~~~g~D~v 252 (375)
T 2vn8_A 183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVRKL--------GADD-VIDYKSGSVEEQLKSLKPFDFI 252 (375)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHHHT--------TCSE-EEETTSSCHHHHHHTSCCBSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHHHc--------CCCE-EEECCchHHHHHHhhcCCCCEE
Confidence 357999999999999999999999999998887 44444433332 1111 12444433222222 479999
Q ss_pred EEeccc
Q 040253 82 FHLATP 87 (338)
Q Consensus 82 i~~a~~ 87 (338)
|++++.
T Consensus 253 id~~g~ 258 (375)
T 2vn8_A 253 LDNVGG 258 (375)
T ss_dssp EESSCT
T ss_pred EECCCC
Confidence 999983
No 489
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=96.69 E-value=0.0018 Score=57.00 Aligned_cols=72 Identities=15% Similarity=0.094 Sum_probs=51.1
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhh-----CCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPI-----RGC 78 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-----~~~ 78 (338)
...+|||+||+|-+|...++.+...|.+|+++++++++.+..+.+.. . ..+ |..+ ++.+.+ .++
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~lGa-----~--~vi--~~~~--~~~~~~~~~~~~g~ 218 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTKKMGA-----D--IVL--NHKE--SLLNQFKTQGIELV 218 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHHHHTC-----S--EEE--CTTS--CHHHHHHHHTCCCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC-----c--EEE--ECCc--cHHHHHHHhCCCCc
Confidence 46799999999999999999999999999999987766655554321 1 111 2222 232222 269
Q ss_pred cEEEEecc
Q 040253 79 TGVFHLAT 86 (338)
Q Consensus 79 d~vi~~a~ 86 (338)
|+||++++
T Consensus 219 Dvv~d~~g 226 (346)
T 3fbg_A 219 DYVFCTFN 226 (346)
T ss_dssp EEEEESSC
T ss_pred cEEEECCC
Confidence 99999987
No 490
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=96.68 E-value=0.0068 Score=45.95 Aligned_cols=34 Identities=26% Similarity=0.375 Sum_probs=29.2
Q ss_pred CcEEEEeCCc---hhhHHHHHHHHHHCCCeEEEEEcC
Q 040253 5 AETVCVTGAS---GFIGSWLIMRLLERGYAVRATVRD 38 (338)
Q Consensus 5 ~~~ilVtGat---G~iG~~l~~~L~~~g~~V~~~~r~ 38 (338)
+++|.|.|++ |.+|..+++.|++.|++|+.++++
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~ 49 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPK 49 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCc
Confidence 5789999998 899999999999999987666544
No 491
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.67 E-value=0.0034 Score=53.81 Aligned_cols=69 Identities=14% Similarity=0.216 Sum_probs=51.0
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
.+++|+|+| .|-+|+.+++.|...|.+|++.+|++........ .+++.+ +.+++.++++++|+|+.
T Consensus 154 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~--------~g~~~~-----~~~~l~~~l~~aDvVi~ 219 (293)
T 3d4o_A 154 HGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAE--------MGMEPF-----HISKAAQELRDVDVCIN 219 (293)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH--------TTSEEE-----EGGGHHHHTTTCSEEEE
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH--------CCCeec-----ChhhHHHHhcCCCEEEE
Confidence 468999998 7999999999999999999999997654333221 122322 12456677889999998
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
+..
T Consensus 220 ~~p 222 (293)
T 3d4o_A 220 TIP 222 (293)
T ss_dssp CCS
T ss_pred CCC
Confidence 874
No 492
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=96.66 E-value=0.0053 Score=51.60 Aligned_cols=65 Identities=14% Similarity=0.083 Sum_probs=48.7
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEEe
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFHL 84 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~ 84 (338)
.++++|+|+ |-.|+.++..|.+.|.+|++++|+.++...+..+ ++... ++ +++ .++|+||++
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la~~--------~~~~~--~~---~~l----~~~DiVIna 179 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQRL--------GCDCF--ME---PPK----SAFDLIINA 179 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHHHH--------TCEEE--SS---CCS----SCCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC--------CCeEe--cH---HHh----ccCCEEEEc
Confidence 579999995 9999999999999999999999999887766521 12222 22 222 278999998
Q ss_pred ccc
Q 040253 85 ATP 87 (338)
Q Consensus 85 a~~ 87 (338)
...
T Consensus 180 Tp~ 182 (269)
T 3phh_A 180 TSA 182 (269)
T ss_dssp CTT
T ss_pred ccC
Confidence 753
No 493
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=96.65 E-value=0.0022 Score=57.67 Aligned_cols=71 Identities=21% Similarity=0.189 Sum_probs=51.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
.+++|+|+|+ |-+|..+++.|...|. +|++++|++++...+.... ++..+ +.+++.+++.++|+||
T Consensus 166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~-------g~~~~-----~~~~l~~~l~~aDvVi 232 (404)
T 1gpj_A 166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL-------GGEAV-----RFDELVDHLARSDVVV 232 (404)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH-------TCEEC-----CGGGHHHHHHTCSEEE
T ss_pred cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc-------CCcee-----cHHhHHHHhcCCCEEE
Confidence 4689999996 9999999999999997 8999999865543332211 12221 2234666778999999
Q ss_pred Eeccc
Q 040253 83 HLATP 87 (338)
Q Consensus 83 ~~a~~ 87 (338)
.+.+.
T Consensus 233 ~at~~ 237 (404)
T 1gpj_A 233 SATAA 237 (404)
T ss_dssp ECCSS
T ss_pred EccCC
Confidence 98753
No 494
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=96.65 E-value=0.0025 Score=54.24 Aligned_cols=66 Identities=15% Similarity=0.189 Sum_probs=49.8
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC---eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY---AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGV 81 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~v 81 (338)
+|+|.|+| +|.+|+.+++.|.+.|+ +|.+.+|+++....+.... ++.. ..+..++++++|+|
T Consensus 3 ~~~I~iIG-~G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~-------gi~~-------~~~~~~~~~~aDvV 67 (280)
T 3tri_A 3 TSNITFIG-GGNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC-------GVHT-------TQDNRQGALNADVV 67 (280)
T ss_dssp CSCEEEES-CSHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT-------CCEE-------ESCHHHHHSSCSEE
T ss_pred CCEEEEEc-ccHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc-------CCEE-------eCChHHHHhcCCeE
Confidence 57899998 59999999999999998 9999999887665554311 2222 23445677889999
Q ss_pred EEec
Q 040253 82 FHLA 85 (338)
Q Consensus 82 i~~a 85 (338)
|-+.
T Consensus 68 ilav 71 (280)
T 3tri_A 68 VLAV 71 (280)
T ss_dssp EECS
T ss_pred EEEe
Confidence 8765
No 495
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=96.64 E-value=0.0061 Score=51.46 Aligned_cols=72 Identities=15% Similarity=0.183 Sum_probs=50.2
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCC-eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGY-AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVF 82 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 82 (338)
..++++|+|+ |-+|+.++..|.+.|. +|++++|+.++...+...... .++..+. + +++.. .++|+||
T Consensus 119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~----~~~~~~~--~---~~l~~--~~~DivI 186 (272)
T 3pwz_A 119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH----SRLRISR--Y---EALEG--QSFDIVV 186 (272)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC----TTEEEEC--S---GGGTT--CCCSEEE
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc----CCeeEee--H---HHhcc--cCCCEEE
Confidence 4689999996 7899999999999995 999999988776665443321 1233332 2 22222 5789999
Q ss_pred Eeccc
Q 040253 83 HLATP 87 (338)
Q Consensus 83 ~~a~~ 87 (338)
++...
T Consensus 187 naTp~ 191 (272)
T 3pwz_A 187 NATSA 191 (272)
T ss_dssp ECSSG
T ss_pred ECCCC
Confidence 98753
No 496
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=96.64 E-value=0.0046 Score=53.86 Aligned_cols=71 Identities=21% Similarity=0.251 Sum_probs=48.7
Q ss_pred EEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCC--CCchhhh-CCccEEEE
Q 040253 7 TVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEE--GNFDEPI-RGCTGVFH 83 (338)
Q Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~~~~~-~~~d~vi~ 83 (338)
+|||+||+|-+|..+++.+...|.+|+++++++++.+..+.+.. . .. .|..+. +.+.++. .++|+||+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~~lGa-----~--~~--i~~~~~~~~~~~~~~~~~~d~vid 222 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGA-----K--EV--LAREDVMAERIRPLDKQRWAAAVD 222 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTC-----S--EE--EECC---------CCSCCEEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCC-----c--EE--EecCCcHHHHHHHhcCCcccEEEE
Confidence 79999999999999999999999999999998877766654321 1 11 233332 1122222 26899999
Q ss_pred ecc
Q 040253 84 LAT 86 (338)
Q Consensus 84 ~a~ 86 (338)
+++
T Consensus 223 ~~g 225 (328)
T 1xa0_A 223 PVG 225 (328)
T ss_dssp CST
T ss_pred CCc
Confidence 987
No 497
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=96.64 E-value=0.0039 Score=52.96 Aligned_cols=68 Identities=18% Similarity=0.259 Sum_probs=47.2
Q ss_pred CcEEEEeCCchhhHHHHHHHHHHCCC--eEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhC-CccEE
Q 040253 5 AETVCVTGASGFIGSWLIMRLLERGY--AVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIR-GCTGV 81 (338)
Q Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~v 81 (338)
||+|.|+| .|.+|+.+++.|.+.|+ +|++.+|+++..+..... ++. + .-..++.++++ ++|+|
T Consensus 1 m~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~--------g~~----~-~~~~~~~~~~~~~aDvV 66 (281)
T 2g5c_A 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL--------GII----D-EGTTSIAKVEDFSPDFV 66 (281)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT--------TSC----S-EEESCGGGGGGTCCSEE
T ss_pred CcEEEEEe-cCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC--------CCc----c-cccCCHHHHhcCCCCEE
Confidence 46899998 89999999999999998 899988876554433221 111 0 00123445677 89999
Q ss_pred EEecc
Q 040253 82 FHLAT 86 (338)
Q Consensus 82 i~~a~ 86 (338)
|-+..
T Consensus 67 ilavp 71 (281)
T 2g5c_A 67 MLSSP 71 (281)
T ss_dssp EECSC
T ss_pred EEcCC
Confidence 97754
No 498
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=96.63 E-value=0.0014 Score=54.60 Aligned_cols=37 Identities=27% Similarity=0.407 Sum_probs=32.9
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCc
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDN 41 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 41 (338)
..|+|.|+| +|.+|+.+++.|.+.|++|++.+|+++.
T Consensus 18 ~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~ 54 (245)
T 3dtt_A 18 QGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA 54 (245)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 468999997 9999999999999999999999998654
No 499
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=96.62 E-value=0.007 Score=52.75 Aligned_cols=67 Identities=15% Similarity=0.054 Sum_probs=49.4
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCeEEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhhhCCccEEEE
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYAVRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEPIRGCTGVFH 83 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 83 (338)
.+|+|.|+| .|.+|+.+++.|...|++|++.+|+......... .++.. . ++.++++++|+|+-
T Consensus 154 ~g~~vgIIG-~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~--------~g~~~-------~-~l~e~l~~aDvVi~ 216 (330)
T 2gcg_A 154 TQSTVGIIG-LGRIGQAIARRLKPFGVQRFLYTGRQPRPEEAAE--------FQAEF-------V-STPELAAQSDFIVV 216 (330)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHGGGTCCEEEEESSSCCHHHHHT--------TTCEE-------C-CHHHHHHHCSEEEE
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCcchhHHHh--------cCcee-------C-CHHHHHhhCCEEEE
Confidence 368999998 6999999999999999999999998765433221 12221 1 35567788999987
Q ss_pred eccc
Q 040253 84 LATP 87 (338)
Q Consensus 84 ~a~~ 87 (338)
+...
T Consensus 217 ~vp~ 220 (330)
T 2gcg_A 217 ACSL 220 (330)
T ss_dssp CCCC
T ss_pred eCCC
Confidence 7753
No 500
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=96.62 E-value=0.01 Score=52.44 Aligned_cols=76 Identities=16% Similarity=0.121 Sum_probs=52.3
Q ss_pred CCcEEEEeCCchhhHHHHHHHHHHCCCe-EEEEEcCCCcHHHHHHHhcCCCCCCcEEEEecccCCCCCchhh----h--C
Q 040253 4 IAETVCVTGASGFIGSWLIMRLLERGYA-VRATVRDPDNKKKVKHLLELPKASTHLTLWKADLAEEGNFDEP----I--R 76 (338)
Q Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~----~--~ 76 (338)
.+.+|||+|+ |-+|...++.+...|.+ |+++++++++.+..+.+ . ..+..+..|-.+.+++.+. . .
T Consensus 179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~-----~~~~~~~~~~~~~~~~~~~v~~~t~g~ 251 (363)
T 3m6i_A 179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-C-----PEVVTHKVERLSAEESAKKIVESFGGI 251 (363)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-C-----TTCEEEECCSCCHHHHHHHHHHHTSSC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-c-----hhcccccccccchHHHHHHHHHHhCCC
Confidence 3578999998 99999999999889986 88888887766665554 2 2223333332233333332 2 2
Q ss_pred CccEEEEecc
Q 040253 77 GCTGVFHLAT 86 (338)
Q Consensus 77 ~~d~vi~~a~ 86 (338)
++|+||.+++
T Consensus 252 g~Dvvid~~g 261 (363)
T 3m6i_A 252 EPAVALECTG 261 (363)
T ss_dssp CCSEEEECSC
T ss_pred CCCEEEECCC
Confidence 6999999987
Done!